TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AB021175.2.1
(1225 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW265262.1|CW265262 104_734_11231767_116_35257_024 Sorgh... 221 e-112
gb|CX610612.1|CX610612 ANR1_19_F05.g1_A002 Anaerobic roots ... 316 e-107
gb|CX607132.1|CX607132 ANR1_6_H04.g1_A002 Anaerobic roots S... 316 8e-096
gb|CF427473.1|CF427473 PH1_1_H09.g1_A002 Phosphorous-defici... 316 2e-092
gb|CX621063.1|CX621063 GABR1_55_F07.g1_A002 GA- or brassino... 316 2e-092
gb|CD224076.1|CD224076 CCC1_31_H11.g1_A007 Callus culture/c... 309 2e-090
gb|CD227920.1|CD227920 CCC1_56_D09.g1_A007 Callus culture/c... 315 9e-090
gb|CD223344.1|CD223344 CCC1_27_G12.g1_A007 Callus culture/c... 308 3e-089
gb|CD225472.1|CD225472 CCC1_3_D06.g1_A007 Callus culture/ce... 315 2e-088
gb|CD226863.1|CD226863 CCC1_48_H08.g1_A007 Callus culture/c... 313 2e-088
gb|CD430045.1|CD430045 ETH1_13_E09.g1_A002 Ethylene-treated... 316 4e-088
gb|CD227894.1|CD227894 CCC1_56_D12.g1_A007 Callus culture/c... 316 5e-085
gb|CD229899.1|CD229899 CCC1_20_C06.g1_A007 Callus culture/c... 316 5e-085
gb|CD227802.1|CD227802 CCC1_53_C05.g1_A007 Callus culture/c... 313 3e-084
gb|BG487560.1|BG487560 EM1_67_E09.b1_A002 Embryo 1 (EM1) So... 312 6e-084
gb|BG739542.1|BG739542 EM1_82_B10.b1_A002 Embryo 1 (EM1) So... 304 2e-081
gb|CD229676.1|CD229676 CCC1_18_F05.g1_A007 Callus culture/c... 300 3e-080
gb|CN126384.1|CN126384 RHOH1_16_G06.g1_A002 Acid- and alkal... 228 4e-080
gb|CW245585.1|CW245585 104_706_11221046_116_35081_055 Sorgh... 210 4e-080
gb|CW245586.1|CW245586 104_706_11221046_116_37600_055 Sorgh... 210 4e-080
gb|CN126295.1|CN126295 RHOH1_16_G06.b1_A002 Acid- and alkal... 228 2e-079
gb|CD225005.1|CD225005 CCC1_37_F06.g1_A007 Callus culture/c... 297 2e-079
gb|CW072243.1|CW072243 104_325_10592151_116_30541 Sorghum m... 155 3e-078
gb|CW170038.1|CW170038 104_580_11154992_148_36515_028 Sorgh... 291 2e-077
gb|CW245587.1|CW245587 104_706_11221046_148_35077_055 Sorgh... 291 2e-077
gb|CX610525.1|CX610525 ANR1_19_F05.b1_A002 Anaerobic roots ... 291 2e-077
gb|BG556244.1|BG556244 EM1_67_E09.g1_A002 Embryo 1 (EM1) So... 287 2e-076
gb|CD223319.1|CD223319 CCC1_27_G12.b1_A007 Callus culture/c... 287 2e-076
gb|CN127915.1|CN127915 RHOH1_25_H02.g1_A002 Acid- and alkal... 220 9e-076
gb|CW490208.1|CW490208 fsbb001f275i13k0 Sorghum methylation... 169 1e-075
gb|CW245588.1|CW245588 104_706_11221046_148_37599_055 Sorgh... 284 2e-075
gb|CD227701.1|CD227701 CCC1_53_E01.b1_A007 Callus culture/c... 281 2e-074
gb|CF432714.1|CF432714 NIT1_18_G04.g1_A002 Nitrogen-deficie... 245 1e-073
gb|BG487643.1|BG487643 EM1_65_E08.g1_A002 Embryo 1 (EM1) So... 276 5e-073
gb|CD223966.1|CD223966 CCC1_31_H11.b1_A007 Callus culture/c... 276 5e-073
gb|BG739375.1|BG739375 EM1_82_B10.g1_A002 Embryo 1 (EM1) So... 275 7e-073
gb|CX607040.1|CX607040 ANR1_6_H04.b1_A002 Anaerobic roots S... 242 5e-072
gb|CW251968.1|CW251968 104_714_11224234_116_35067_033 Sorgh... 169 6e-071
gb|CD227695.1|CD227695 CCC1_53_E04.b1_A007 Callus culture/c... 267 3e-070
gb|BG487479.1|BG487479 EM1_65_E08.b1_A002 Embryo 1 (EM1) So... 258 2e-067
gb|CD219479.1|CD219479 CCC1_57_E11.b1_A007 Callus culture/c... 256 4e-067
gb|CL189546.1|CL189546 104_406_10902373_114_32469_049 Sorgh... 145 6e-066
gb|CD228642.1|CD228642 CCC1_8_A01.g1_A007 Callus culture/ce... 246 6e-064
gb|CW257668.1|CW257668 104_723_11227460_148_35155_076 Sorgh... 125 4e-061
gb|CD226775.1|CD226775 CCC1_48_H08.b1_A007 Callus culture/c... 233 5e-060
gb|CD224897.1|CD224897 CCC1_37_F06.b1_A007 Callus culture/c... 232 1e-059
gb|CF428909.1|CF428909 PH1_18_E02.g1_A002 Phosphorous-defic... 226 5e-058
gb|CF430946.1|CF430946 NIT1_1_H06.g1_A002 Nitrogen-deficien... 221 2e-056
gb|CL150226.1|CL150226 104_331_10778370_114_31355_306 Sorgh... 122 6e-054
gb|BZ348485.1|BZ348485 hp58c02.g2 WGS-SbicolorF (JM107 adap... 100 2e-053
gb|CW201025.1|CW201025 104_626_11184349_148_36933_051 Sorgh... 170 1e-052
gb|CW490207.1|CW490207 fsbb001f275i13f0 Sorghum methylation... 145 1e-049
gb|CW251969.1|CW251969 104_714_11224234_148_35071_033 Sorgh... 145 1e-049
gb|CW382245.1|CW382245 fsbb001f064a16f0 Sorghum methylation... 145 1e-049
gb|CW241279.1|CW241279 104_700_11218680_148_37541_090 Sorgh... 157 5e-049
gb|CN130629.1|CN130629 RHOH1_42_F06.g1_A002 Acid- and alkal... 178 2e-045
gb|CX615009.1|CX615009 GABR1_17_D03.g1_A002 GA- or brassino... 178 2e-045
gb|CX606349.1|CX606349 ANR1_2_C01.g1_A002 Anaerobic roots S... 178 2e-045
gb|CN138740.1|CN138740 OX1_13_D08.g1_A002 Oxidatively-stres... 178 2e-045
gb|CW257667.1|CW257667 104_723_11227460_116_35159_076 Sorgh... 100 1e-044
gb|CX618625.1|CX618625 GABR1_40_E09.g1_A002 GA- or brassino... 178 2e-044
gb|CN131509.1|CN131509 RHOH1_48_C08.g1_A002 Acid- and alkal... 175 3e-044
gb|CD235577.1|CD235577 SS1_36_G11.g1_A012 Salt-stressed see... 178 1e-043
gb|CF433982.1|CF433982 NIT1_31_D04.g1_A002 Nitrogen-deficie... 178 1e-043
gb|CX616037.1|CX616037 GABR1_25_B02.g1_A002 GA- or brassino... 177 3e-043
gb|CX615362.1|CX615362 GABR1_19_E05.g1_A002 GA- or brassino... 176 6e-043
gb|CX609133.1|CX609133 ANR1_10_G12.g1_A002 Anaerobic roots ... 175 2e-042
gb|CD233122.1|CD233122 SS1_11_D05.g1_A012 Salt-stressed see... 174 2e-042
gb|CX609563.1|CX609563 ANR1_13_A05.g1_A002 Anaerobic roots ... 174 2e-042
gb|CX611921.1|CX611921 ANR1_27_B02.g1_A002 Anaerobic roots ... 174 2e-042
gb|CX612111.1|CX612111 ANR1_28_C05.g1_A002 Anaerobic roots ... 174 2e-042
gb|CX613689.1|CX613689 GABR1_9_D06.g1_A002 GA- or brassinol... 174 2e-042
gb|CX607779.1|CX607779 ANR1_30_E05.g1_A002 Anaerobic roots ... 174 3e-042
gb|CF427457.1|CF427457 PH1_1_D07.g1_A002 Phosphorous-defici... 172 7e-042
gb|CN127041.1|CN127041 RHOH1_20_E05.g1_A002 Acid- and alkal... 172 1e-041
gb|CD429468.1|CD429468 ETH1_4_D08.g1_A002 Ethylene-treated ... 168 1e-040
gb|CW166934.1|CW166934 104_575_11153325_116_36768_081 Sorgh... 110 1e-040
gb|CD225047.1|CD225047 CCC1_37_H01.g1_A007 Callus culture/c... 168 2e-040
gb|CW222774.1|CW222774 104_658_11202555_148_37182_010 Sorgh... 137 7e-040
gb|CW222773.1|CW222773 104_658_11202555_116_37181_010 Sorgh... 137 3e-039
gb|CN138657.1|CN138657 OX1_13_D08.b1_A002 Oxidatively-stres... 128 2e-038
gb|CN130552.1|CN130552 RHOH1_42_F06.b1_A002 Acid- and alkal... 128 2e-038
gb|CW400147.1|CW400147 fsbb001f090f06f0 Sorghum methylation... 101 3e-038
gb|CW390164.1|CW390164 fsbb001f075l10f0 Sorghum methylation... 94 6e-038
gb|CX620981.1|CX620981 GABR1_55_F07.b1_A002 GA- or brassino... 159 1e-037
gb|CL196090.1|CL196090 104_422_10942830_114_32319_031 Sorgh... 100 4e-036
gb|CL150227.1|CL150227 104_331_10778370_116_31356_306 Sorgh... 100 6e-035
gb|CW315799.1|CW315799 104_807_11472554_116_35843_015 Sorgh... 149 8e-035
gb|CF430845.1|CF430845 NIT1_1_H06.b1_A002 Nitrogen-deficien... 149 1e-034
gb|CW270551.1|CW270551 104_742_11402487_116_35332_060 Sorgh... 110 1e-034
gb|CX615277.1|CX615277 GABR1_19_E05.b1_A002 GA- or brassino... 128 1e-034
gb|CW323217.1|CW323217 104_817_11476514_116_35958_009 Sorgh... 103 7e-033
gb|CX610895.1|CX610895 ANR1_21_A08.g1_A002 Anaerobic roots ... 83 3e-031
gb|CW170171.1|CW170171 104_580_11155065_116_36509_039 Sorgh... 101 9e-031
gb|CF431003.1|CF431003 NIT1_4_B04.b1_A002 Nitrogen-deficien... 126 4e-030
gb|CW113669.1|CW113669 104_488_11105572_148_34562_014 Sorgh... 133 4e-030
gb|CW022976.1|CW022976 104_162_10432168_5_30000 Sorghum met... 133 5e-030
gb|CF426915.1|CF426915 PH1_2_A02.g1_A002 Phosphorous-defici... 94 5e-029
gb|CD225367.1|CD225367 CCC1_3_D06.b1_A007 Callus culture/ce... 128 1e-028
gb|CW463792.1|CW463792 fsbb001f212k15k0 Sorghum methylation... 94 2e-028
gb|CX607377.1|CX607377 ANR1_8_F11.b1_A002 Anaerobic roots S... 128 2e-028
gb|CW363882.1|CW363882 fsbb001f035l01f0 Sorghum methylation... 123 6e-027
gb|CL174521.1|CL174521 104_379_10891693_116_31769_061 Sorgh... 121 2e-026
gb|CW323218.1|CW323218 104_817_11476514_148_35959_009 Sorgh... 121 2e-026
gb|CF428899.1|CF428899 PH1_18_E09.g1_A002 Phosphorous-defic... 120 5e-026
gb|CX609478.1|CX609478 ANR1_13_A05.b1_A002 Anaerobic roots ... 93 4e-025
gb|CD233024.1|CD233024 SS1_11_D05.b1_A012 Salt-stressed see... 93 4e-025
gb|CX611834.1|CX611834 ANR1_27_B02.b1_A002 Anaerobic roots ... 93 4e-025
gb|CW040234.1|CW040234 104_273_10505995_114_30263 Sorghum m... 115 1e-024
gb|CX610812.1|CX610812 ANR1_21_A08.b1_A002 Anaerobic roots ... 115 1e-024
gb|CX607694.1|CX607694 ANR1_30_E05.b1_A002 Anaerobic roots ... 93 4e-024
gb|CD429417.1|CD429417 ETH1_4_D08.b1_A002 Ethylene-treated ... 93 4e-024
gb|CW270552.1|CW270552 104_742_11402487_148_35336_060 Sorgh... 94 1e-023
gb|CX612021.1|CX612021 ANR1_28_C05.b1_A002 Anaerobic roots ... 93 1e-022
gb|BE355739.1|BE355739 DG1_116_F07.g1_A002 Dark Grown 1 (DG... 62 1e-022
gb|CL188962.1|CL188962 104_405_10901951_114_32452_084 Sorgh... 62 1e-022
>gb|CW265262.1|CW265262 104_734_11231767_116_35257_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11231767, DNA
sequence
Length = 662
Score = 221 bits (477), Expect(2) = e-112
Identities = 91/109 (83%), Positives = 93/109 (85%)
Frame = +1 / -2
Query: 619 PRFVGARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
PRFVGARWSPPTAPALS ELRG FRIVA+VVPITAEDSRIHNYGV EDD
Sbjct: 328 PRFVGARWSPPTAPALSVTRTARVNTVVIELRGVFRIVANVVPITAEDSRIHNYGVTEDD 149
Query: 799 GDTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAP 945
D+LAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTS MPVMGGAP
Sbjct: 148 DDSLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSKMPVMGGAP 2
Score = 206 bits (445), Expect(2) = e-112
Identities = 76/84 (90%), Positives = 80/84 (95%)
Frame = +1 / -2
Query: 301 LCDFYPGVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFT 480
+CDFYPGVSCGDPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAMSRDFT
Sbjct: 637 VCDFYPGVSCGDPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAMSRDFT 458
Query: 481 WIQALGIRFAHHHLYVAAQRTPRW 552
WIQALGIRFAHHHLYV A +TP+W
Sbjct: 457 WIQALGIRFAHHHLYVGAAKTPKW 386
Score = 191 bits (411), Expect(2) = 4e-098
Identities = 86/109 (78%), Positives = 90/109 (82%)
Frame = -3 / +3
Query: 944 GAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*NLKPRSRCARVSPSSSLTP*LWIR 765
GAPPMTG+L+VTLRLLT*SGR*VWPSTP TSSVRS*NLKPRSRCAR+S SSS+TP*LWI
Sbjct: 3 GAPPMTGILEVTLRLLT*SGR*VWPSTPWTSSVRS*NLKPRSRCARLSSSSSVTP*LWIL 182
Query: 764 ESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGAVGGDQRAPTKRG 618
ESSAVMGTTLATMRK P TD AGAVGGDQRAPTKRG
Sbjct: 183 ESSAVMGTTLATMRKTPLSSMTTVLTRAVRVTDRAGAVGGDQRAPTKRG 329
Score = 189 bits (408), Expect(2) = 4e-098
Identities = 78/83 (93%), Positives = 79/83 (95%)
Frame = -3 / +3
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HLGVL A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK
Sbjct: 387 HLGVLAAPT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK 566
Query: 371 *KLLPSAPVKRGSPQDTPG*KSH 303
*KLLPSAPVKRGSPQDTPG*KSH
Sbjct: 567 *KLLPSAPVKRGSPQDTPG*KSH 635
Score = 59.3 bits (123), Expect(3) = 1e-022
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = -2 / +2
Query: 522 EVVVREADAQRLDPGEVAAHGRVALA 445
EVVVREADA+RLDPGEVAAHGRVALA
Sbjct: 416 EVVVREADAERLDPGEVAAHGRVALA 493
Score = 53.8 bits (111), Expect(3) = 1e-022
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = -2 / +2
Query: 942 RASHDGHVGCDVEAVDVVRAVGLAQ 868
RA+HDGH+G DVEAVDVVRAVGLAQ
Sbjct: 5 RAAHDGHLGGDVEAVDVVRAVGLAQ 79
Score = 37.3 bits (75), Expect(3) = 1e-022
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / +2
Query: 756 GGDGHYAGDDAEGAPEL 706
GGDGH GDDAE APEL
Sbjct: 191 GGDGHDVGDDAEDAPEL 241
>gb|CX610612.1|CX610612 ANR1_19_F05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_19_F05_A002 5', mRNA sequence
Length = 783
Score = 316 bits (684), Expect(2) = e-107
Identities = 118/133 (88%), Positives = 123/133 (92%)
Frame = +1 / +1
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCG
Sbjct: 166 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCG 345
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAH 513
DPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAMSRDFTWIQALGIRFAH
Sbjct: 346 DPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAMSRDFTWIQALGIRFAH 525
Query: 514 HHLYVAAQRTPRW 552
HHLYV A +TP+W
Sbjct: 526 HHLYVGAAKTPKW 564
Score = 221 bits (478), Expect(3) = 1e-076
Identities = 90/96 (93%), Positives = 91/96 (94%)
Frame = -3 / -2
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HLGVL A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK
Sbjct: 563 HLGVLAAPT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK 384
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
*KLLPSAPVKRGSPQDTPG*KSHKQ VLQLGHWMRH
Sbjct: 383 *KLLPSAPVKRGSPQDTPG*KSHKQKVLQLGHWMRH 276
Score = 95.9 bits (203), Expect(2) = e-107
Identities = 40/54 (74%), Positives = 41/54 (75%)
Frame = +1 / +1
Query: 619 PRFVGARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNY 780
PRFVGARWSPPTAPALS ELRG FRIVA+VVPITAEDSRIHNY
Sbjct: 622 PRFVGARWSPPTAPALSVTRTARVNTVVIELRGVFRIVANVVPITAEDSRIHNY 783
Score = 95.9 bits (203), Expect(3) = 2e-023
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = +3 / +3
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTLH 347
LQR+ H SQVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD PTLH
Sbjct: 183 LQRASHHSQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTLH 359
Score = 80.8 bits (170), Expect(3) = 1e-076
Identities = 37/54 (68%), Positives = 37/54 (68%)
Frame = -3 / -2
Query: 779 *LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGAVGGDQRAPTKRG 618
*LWI ESSAVMGTTLATMRK P TD AGAVGGDQRAPTKRG
Sbjct: 782 *LWILESSAVMGTTLATMRKTPLSSMTTVLTRAVRVTDRAGAVGGDQRAPTKRG 621
Score = 34.5 bits (69), Expect(3) = 2e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 450 AQPGHEPRLHLD 485
AQPGHEPRLHLD
Sbjct: 462 AQPGHEPRLHLD 497
Score = 25.4 bits (49), Expect(3) = 1e-076
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -3
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 292 GTG*GTCEG 266
Score = 23.5 bits (45), Expect(3) = 2e-023
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3 / +3
Query: 744 AHHRRGLAD 770
AHHRRGL D
Sbjct: 747 AHHRRGLQD 773
>gb|CX607132.1|CX607132 ANR1_6_H04.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_H04_A002 5', mRNA sequence
Length = 753
Score = 316 bits (684), Expect(3) = 8e-096
Identities = 118/133 (88%), Positives = 123/133 (92%)
Frame = +1 / +2
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCG
Sbjct: 164 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCG 343
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAH 513
DPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAMSRDFTWIQALGIRFAH
Sbjct: 344 DPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAMSRDFTWIQALGIRFAH 523
Query: 514 HHLYVAAQRTPRW 552
HHLYV A +TP+W
Sbjct: 524 HHLYVGAAKTPKW 562
Score = 221 bits (478), Expect(4) = 9e-068
Identities = 90/96 (93%), Positives = 91/96 (94%)
Frame = -3 / -1
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HLGVL A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK
Sbjct: 561 HLGVLAAPT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK 382
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
*KLLPSAPVKRGSPQDTPG*KSHKQ VLQLGHWMRH
Sbjct: 381 *KLLPSAPVKRGSPQDTPG*KSHKQKVLQLGHWMRH 274
Score = 95.9 bits (203), Expect(2) = 3e-023
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = +3 / +1
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTLH 347
LQR+ H SQVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD PTLH
Sbjct: 181 LQRASHHSQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTLH 357
Score = 51.5 bits (106), Expect(3) = 8e-096
Identities = 21/33 (63%), Positives = 21/33 (63%)
Frame = +1 / +2
Query: 619 PRFVGARWSPPTAPALSXXXXXXXXXXXXELRG 717
PRFVGARWSPPTAPALS ELRG
Sbjct: 620 PRFVGARWSPPTAPALSVTRTARVNTVVIELRG 718
Score = 40.9 bits (83), Expect(4) = 9e-068
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / -1
Query: 668 DSAGAVGGDQRAPTKRG 618
D AGAVGGDQRAPTKRG
Sbjct: 669 DRAGAVGGDQRAPTKRG 619
Score = 34.5 bits (69), Expect(2) = 3e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +1
Query: 450 AQPGHEPRLHLD 485
AQPGHEPRLHLD
Sbjct: 460 AQPGHEPRLHLD 495
Score = 28.6 bits (56), Expect(4) = 9e-068
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3 / -2
Query: 752 VMGTTLATMRKAP 714
VMGTTLATMR+ P
Sbjct: 752 VMGTTLATMRRRP 714
Score = 25.4 bits (49), Expect(4) = 9e-068
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -2
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 290 GTG*GTCEG 264
Score = 24.9 bits (48), Expect(3) = 8e-096
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1 / +1
Query: 712 RGAFRIVASVVPIT 753
+G RIVA+VVPIT
Sbjct: 712 QGRLRIVANVVPIT 753
>gb|CF427473.1|CF427473 PH1_1_H09.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_1_H09_A002 5', mRNA sequence
Length = 713
Score = 316 bits (684), Expect(2) = 2e-092
Identities = 118/133 (88%), Positives = 123/133 (92%)
Frame = +1 / +1
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCG
Sbjct: 172 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCG 351
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAH 513
DPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAMSRDFTWIQALGIRFAH
Sbjct: 352 DPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAMSRDFTWIQALGIRFAH 531
Query: 514 HHLYVAAQRTPRW 552
HHLYV A +TP+W
Sbjct: 532 HHLYVGAAKTPKW 570
Score = 221 bits (478), Expect(3) = 1e-064
Identities = 90/96 (93%), Positives = 91/96 (94%)
Frame = -3 / -1
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HLGVL A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK
Sbjct: 569 HLGVLAAPT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK 390
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
*KLLPSAPVKRGSPQDTPG*KSHKQ VLQLGHWMRH
Sbjct: 389 *KLLPSAPVKRGSPQDTPG*KSHKQKVLQLGHWMRH 282
Score = 95.9 bits (203), Expect(2) = 3e-023
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = +3 / +3
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTLH 347
LQR+ H SQVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD PTLH
Sbjct: 189 LQRASHHSQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTLH 365
Score = 46.0 bits (94), Expect(2) = 2e-092
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1 / +1
Query: 619 PRFVGARWSPPTAPALS 669
PRFVGARWSPPTAPALS
Sbjct: 628 PRFVGARWSPPTAPALS 678
Score = 40.9 bits (83), Expect(3) = 1e-064
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / -1
Query: 668 DSAGAVGGDQRAPTKRG 618
D AGAVGGDQRAPTKRG
Sbjct: 677 DRAGAVGGDQRAPTKRG 627
Score = 34.5 bits (69), Expect(2) = 3e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 450 AQPGHEPRLHLD 485
AQPGHEPRLHLD
Sbjct: 468 AQPGHEPRLHLD 503
Score = 25.4 bits (49), Expect(3) = 1e-064
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -2
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 298 GTG*GTCEG 272
>gb|CX621063.1|CX621063 GABR1_55_F07.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_55_F07_A002 5', mRNA sequence
Length = 686
Score = 316 bits (684), Expect(2) = 2e-092
Identities = 118/133 (88%), Positives = 123/133 (92%)
Frame = +1 / +2
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCG
Sbjct: 158 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCG 337
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAH 513
DPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAMSRDFTWIQALGIRFAH
Sbjct: 338 DPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAMSRDFTWIQALGIRFAH 517
Query: 514 HHLYVAAQRTPRW 552
HHLYV A +TP+W
Sbjct: 518 HHLYVGAAKTPKW 556
Score = 221 bits (478), Expect(3) = 1e-064
Identities = 90/96 (93%), Positives = 91/96 (94%)
Frame = -3 / -3
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HLGVL A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK
Sbjct: 555 HLGVLAAPT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK 376
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
*KLLPSAPVKRGSPQDTPG*KSHKQ VLQLGHWMRH
Sbjct: 375 *KLLPSAPVKRGSPQDTPG*KSHKQKVLQLGHWMRH 268
Score = 95.9 bits (203), Expect(2) = 3e-023
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = +3 / +1
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTLH 347
LQR+ H SQVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD PTLH
Sbjct: 175 LQRASHHSQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTLH 351
Score = 46.0 bits (94), Expect(2) = 2e-092
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1 / +2
Query: 619 PRFVGARWSPPTAPALS 669
PRFVGARWSPPTAPALS
Sbjct: 614 PRFVGARWSPPTAPALS 664
Score = 40.9 bits (83), Expect(3) = 1e-064
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / -3
Query: 668 DSAGAVGGDQRAPTKRG 618
D AGAVGGDQRAPTKRG
Sbjct: 663 DRAGAVGGDQRAPTKRG 613
Score = 34.5 bits (69), Expect(2) = 3e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +1
Query: 450 AQPGHEPRLHLD 485
AQPGHEPRLHLD
Sbjct: 454 AQPGHEPRLHLD 489
Score = 25.4 bits (49), Expect(3) = 1e-064
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 284 GTG*GTCEG 258
>gb|CD224076.1|CD224076 CCC1_31_H11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_31_H11_A007 5', mRNA sequence
Length = 697
Score = 309 bits (669), Expect(2) = 2e-090
Identities = 117/133 (87%), Positives = 122/133 (91%)
Frame = +1 / +1
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCG
Sbjct: 172 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCG 351
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAH 513
DPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAMSRDFT IQALGIRFAH
Sbjct: 352 DPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAMSRDFT*IQALGIRFAH 531
Query: 514 HHLYVAAQRTPRW 552
HHLYV A +TP+W
Sbjct: 532 HHLYVGAAKTPKW 570
Score = 221 bits (478), Expect(3) = 1e-064
Identities = 90/96 (93%), Positives = 91/96 (94%)
Frame = -3 / -3
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HLGVL A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK
Sbjct: 569 HLGVLAAPT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK 390
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
*KLLPSAPVKRGSPQDTPG*KSHKQ VLQLGHWMRH
Sbjct: 389 *KLLPSAPVKRGSPQDTPG*KSHKQKVLQLGHWMRH 282
Score = 95.9 bits (203), Expect(2) = 2e-022
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = +3 / +3
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTLH 347
LQR+ H SQVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD PTLH
Sbjct: 189 LQRASHHSQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTLH 365
Score = 46.0 bits (94), Expect(2) = 2e-090
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1 / +1
Query: 619 PRFVGARWSPPTAPALS 669
PRFVGARWSPPTAPALS
Sbjct: 628 PRFVGARWSPPTAPALS 678
Score = 40.9 bits (83), Expect(3) = 1e-064
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / -3
Query: 668 DSAGAVGGDQRAPTKRG 618
D AGAVGGDQRAPTKRG
Sbjct: 677 DRAGAVGGDQRAPTKRG 627
Score = 32.2 bits (64), Expect(2) = 2e-022
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 450 AQPGHEPRLHLD 485
AQPGHEPRLHL+
Sbjct: 468 AQPGHEPRLHLN 503
Score = 25.4 bits (49), Expect(3) = 1e-064
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 298 GTG*GTCEG 272
>gb|CD227920.1|CD227920 CCC1_56_D09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_56_D09_A007 5', mRNA sequence
Length = 664
Score = 315 bits (683), Expect(2) = 9e-090
Identities = 118/133 (88%), Positives = 123/133 (92%)
Frame = +1 / +3
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCG
Sbjct: 168 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCG 347
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAH 513
DPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAMSRDFTWIQALGIRFAH
Sbjct: 348 DPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAMSRDFTWIQALGIRFAH 527
Query: 514 HHLYVAAQRTPRW 552
HHLYV A +TP+W
Sbjct: 528 HHLYVGAAQTPKW 566
Score = 219 bits (472), Expect(3) = 1e-062
Identities = 89/96 (92%), Positives = 90/96 (93%)
Frame = -3 / -1
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HLGV A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK
Sbjct: 565 HLGVWAAPT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK 386
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
*KLLPSAPVKRGSPQDTPG*KSHKQ VLQLGHWMRH
Sbjct: 385 *KLLPSAPVKRGSPQDTPG*KSHKQKVLQLGHWMRH 278
Score = 95.9 bits (203), Expect(2) = 3e-023
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = +3 / +2
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTLH 347
LQR+ H SQVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD PTLH
Sbjct: 185 LQRASHHSQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTLH 361
Score = 37.3 bits (75), Expect(2) = 9e-090
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1 / +3
Query: 619 PRFVGARWSPPTA 657
PRFVGARWSPPTA
Sbjct: 624 PRFVGARWSPPTA 662
Score = 36.8 bits (74), Expect(3) = 1e-062
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -3 / -1
Query: 659 GAVGGDQRAPTKRG 618
GAVGGDQRAPTKRG
Sbjct: 664 GAVGGDQRAPTKRG 623
Score = 34.5 bits (69), Expect(2) = 3e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 450 AQPGHEPRLHLD 485
AQPGHEPRLHLD
Sbjct: 464 AQPGHEPRLHLD 499
Score = 25.4 bits (49), Expect(3) = 1e-062
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -2
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 294 GTG*GTCEG 268
>gb|CD223344.1|CD223344 CCC1_27_G12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_27_G12_A007 5', mRNA sequence
Length = 678
Score = 308 bits (668), Expect(2) = 3e-089
Identities = 116/133 (87%), Positives = 121/133 (90%)
Frame = +1 / +1
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFCL DFYPGVSCG
Sbjct: 178 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFCLYDFYPGVSCG 357
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAH 513
DPRF GADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAMSRDFTWIQALGIRFAH
Sbjct: 358 DPRFAGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAMSRDFTWIQALGIRFAH 537
Query: 514 HHLYVAAQRTPRW 552
HHLYV A +TP+W
Sbjct: 538 HHLYVGAAKTPKW 576
Score = 217 bits (468), Expect(3) = 1e-062
Identities = 88/96 (91%), Positives = 90/96 (93%)
Frame = -3 / -2
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HLGVL A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK
Sbjct: 575 HLGVLAAPT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK 396
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
*KLLPSAP KRGSPQDTPG*KS+KQ VLQLGHWMRH
Sbjct: 395 *KLLPSAPAKRGSPQDTPG*KSYKQKVLQLGHWMRH 288
Score = 92.3 bits (195), Expect(2) = 4e-022
Identities = 37/58 (63%), Positives = 41/58 (70%)
Frame = +3 / +3
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTL 344
LQR+ H SQVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD PTL
Sbjct: 195 LQRASHHSQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTL 368
Score = 42.3 bits (86), Expect(2) = 3e-089
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1 / +1
Query: 619 PRFVGARWSPPTAPA 663
PRFVGARWSPPTAPA
Sbjct: 634 PRFVGARWSPPTAPA 678
Score = 38.6 bits (78), Expect(3) = 1e-062
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3 / -2
Query: 662 AGAVGGDQRAPTKRG 618
AGAVGGDQRAPTKRG
Sbjct: 677 AGAVGGDQRAPTKRG 633
Score = 34.5 bits (69), Expect(2) = 4e-022
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 450 AQPGHEPRLHLD 485
AQPGHEPRLHLD
Sbjct: 474 AQPGHEPRLHLD 509
Score = 25.4 bits (49), Expect(3) = 1e-062
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -3
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 304 GTG*GTCEG 278
>gb|CD225472.1|CD225472 CCC1_3_D06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_3_D06_A007 5', mRNA sequence
Length = 667
Score = 315 bits (683), Expect(2) = 2e-088
Identities = 118/133 (88%), Positives = 122/133 (91%)
Frame = +1 / +3
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCG
Sbjct: 177 PVLAVASNARATTLKCTNTKDNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCG 356
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAH 513
DPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAMSRDFTWIQALGIRFAH
Sbjct: 357 DPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAMSRDFTWIQALGIRFAH 536
Query: 514 HHLYVAAQRTPRW 552
HHLYV A +TP+W
Sbjct: 537 HHLYVGAAKTPKW 575
Score = 221 bits (478), Expect(3) = 4e-062
Identities = 90/96 (93%), Positives = 91/96 (94%)
Frame = -3 / -1
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HLGVL A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK
Sbjct: 574 HLGVLAAPT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK 395
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
*KLLPSAPVKRGSPQDTPG*KSHKQ VLQLGHWMRH
Sbjct: 394 *KLLPSAPVKRGSPQDTPG*KSHKQKVLQLGHWMRH 287
Score = 92.7 bits (196), Expect(2) = 3e-022
Identities = 37/59 (62%), Positives = 41/59 (69%)
Frame = +3 / +2
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTLH 347
LQR+ H SQVHQHQ QQDHLQRHLQ+ +PSQVPHPVP+LQD PTLH
Sbjct: 194 LQRASHHSQVHQHQGQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTLH 370
Score = 34.5 bits (69), Expect(2) = 3e-022
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 450 AQPGHEPRLHLD 485
AQPGHEPRLHLD
Sbjct: 473 AQPGHEPRLHLD 508
Score = 33.1 bits (66), Expect(2) = 2e-088
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1 / +3
Query: 619 PRFVGARWSPP 651
PRFVGARWSPP
Sbjct: 633 PRFVGARWSPP 665
Score = 32.2 bits (64), Expect(3) = 4e-062
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -3 / -1
Query: 653 VGGDQRAPTKRG 618
VGGDQRAPTKRG
Sbjct: 667 VGGDQRAPTKRG 632
Score = 25.4 bits (49), Expect(3) = 4e-062
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -2
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 303 GTG*GTCEG 277
>gb|CD226863.1|CD226863 CCC1_48_H08.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_48_H08_A007 5', mRNA sequence
Length = 654
Score = 313 bits (677), Expect(2) = 2e-088
Identities = 117/133 (87%), Positives = 122/133 (91%)
Frame = +1 / +3
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKC IQCPSCKTFCLCDFYPGVSCG
Sbjct: 162 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCPIQCPSCKTFCLCDFYPGVSCG 341
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAH 513
DPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAMSRDFTWIQALGIRFAH
Sbjct: 342 DPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAMSRDFTWIQALGIRFAH 521
Query: 514 HHLYVAAQRTPRW 552
HHLYV A +TP+W
Sbjct: 522 HHLYVGAAKTPKW 560
Score = 218 bits (471), Expect(3) = 2e-060
Identities = 89/96 (92%), Positives = 90/96 (93%)
Frame = -3 / -3
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HLGVL A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK
Sbjct: 559 HLGVLAAPT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK 380
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
*KLLPSAPVKRGSPQDTPG*KSHKQ VLQLGHWM H
Sbjct: 379 *KLLPSAPVKRGSPQDTPG*KSHKQKVLQLGHWMGH 272
Score = 95.9 bits (203), Expect(2) = 3e-023
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = +3 / +2
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTLH 347
LQR+ H SQVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD PTLH
Sbjct: 179 LQRASHHSQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTLH 355
Score = 35.4 bits (71), Expect(2) = 2e-088
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1 / +3
Query: 619 PRFVGARWSPPT 654
PRFVGARWSPPT
Sbjct: 618 PRFVGARWSPPT 653
Score = 34.5 bits (69), Expect(2) = 3e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 450 AQPGHEPRLHLD 485
AQPGHEPRLHLD
Sbjct: 458 AQPGHEPRLHLD 493
Score = 32.2 bits (64), Expect(3) = 2e-060
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -3 / -3
Query: 653 VGGDQRAPTKRG 618
VGGDQRAPTKRG
Sbjct: 652 VGGDQRAPTKRG 617
Score = 23.1 bits (44), Expect(3) = 2e-060
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -1
Query: 280 GTG*GTCEG 254
GTG GTCEG
Sbjct: 288 GTGWGTCEG 262
>gb|CD430045.1|CD430045 ETH1_13_E09.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_13_E09_A002 5', mRNA sequence
Length = 642
Score = 316 bits (684), Expect(2) = 4e-088
Identities = 118/133 (88%), Positives = 123/133 (92%)
Frame = +1 / +2
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCG
Sbjct: 167 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCG 346
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAH 513
DPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAMSRDFTWIQALGIRFAH
Sbjct: 347 DPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAMSRDFTWIQALGIRFAH 526
Query: 514 HHLYVAAQRTPRW 552
HHLYV A +TP+W
Sbjct: 527 HHLYVGAAKTPKW 565
Score = 221 bits (478), Expect(3) = 2e-061
Identities = 90/96 (93%), Positives = 91/96 (94%)
Frame = -3 / -1
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HLGVL A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK
Sbjct: 564 HLGVLAAPT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK 385
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
*KLLPSAPVKRGSPQDTPG*KSHKQ VLQLGHWMRH
Sbjct: 384 *KLLPSAPVKRGSPQDTPG*KSHKQKVLQLGHWMRH 277
Score = 95.9 bits (203), Expect(2) = 3e-023
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = +3 / +1
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTLH 347
LQR+ H SQVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD PTLH
Sbjct: 184 LQRASHHSQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTLH 360
Score = 34.5 bits (69), Expect(2) = 3e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +1
Query: 450 AQPGHEPRLHLD 485
AQPGHEPRLHLD
Sbjct: 463 AQPGHEPRLHLD 498
Score = 34.5 bits (69), Expect(3) = 2e-061
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2 / -3
Query: 753 GDGHYAGDDAEGAPEL 706
GDGH GDDAE APEL
Sbjct: 640 GDGHDVGDDAEDAPEL 593
Score = 34.1 bits (68), Expect(2) = 4e-088
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1 / +2
Query: 706 ELRGAFRIVASVVPIT 753
ELRG FRIVA+VVPIT
Sbjct: 593 ELRGVFRIVANVVPIT 640
Score = 25.4 bits (49), Expect(3) = 2e-061
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -2
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 293 GTG*GTCEG 267
>gb|CD227894.1|CD227894 CCC1_56_D12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_56_D12_A007 5', mRNA sequence
Length = 629
Score = 316 bits (684), Expect = 5e-085
Identities = 118/133 (88%), Positives = 123/133 (92%)
Frame = +1 / +3
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCG
Sbjct: 168 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCG 347
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAH 513
DPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAMSRDFTWIQALGIRFAH
Sbjct: 348 DPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAMSRDFTWIQALGIRFAH 527
Query: 514 HHLYVAAQRTPRW 552
HHLYV A +TP+W
Sbjct: 528 HHLYVGAAKTPKW 566
Score = 221 bits (478), Expect(2) = 5e-058
Identities = 90/96 (93%), Positives = 91/96 (94%)
Frame = -3 / -2
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HLGVL A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK
Sbjct: 565 HLGVLAAPT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK 386
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
*KLLPSAPVKRGSPQDTPG*KSHKQ VLQLGHWMRH
Sbjct: 385 *KLLPSAPVKRGSPQDTPG*KSHKQKVLQLGHWMRH 278
Score = 95.9 bits (203), Expect(2) = 3e-023
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = +3 / +2
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTLH 347
LQR+ H SQVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD PTLH
Sbjct: 185 LQRASHHSQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTLH 361
Score = 34.5 bits (69), Expect(2) = 3e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 450 AQPGHEPRLHLD 485
AQPGHEPRLHLD
Sbjct: 464 AQPGHEPRLHLD 499
Score = 25.4 bits (49), Expect(2) = 5e-058
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -3
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 294 GTG*GTCEG 268
>gb|CD229899.1|CD229899 CCC1_20_C06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_20_C06_A007 5', mRNA sequence
Length = 659
Score = 316 bits (684), Expect = 5e-085
Identities = 118/133 (88%), Positives = 123/133 (92%)
Frame = +1 / +1
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCG
Sbjct: 181 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCG 360
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAH 513
DPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAMSRDFTWIQALGIRFAH
Sbjct: 361 DPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAMSRDFTWIQALGIRFAH 540
Query: 514 HHLYVAAQRTPRW 552
HHLYV A +TP+W
Sbjct: 541 HHLYVGAAKTPKW 579
Score = 221 bits (478), Expect(3) = 4e-059
Identities = 90/96 (93%), Positives = 91/96 (94%)
Frame = -3 / -1
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HLGVL A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK
Sbjct: 578 HLGVLAAPT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK 399
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
*KLLPSAPVKRGSPQDTPG*KSHKQ VLQLGHWMRH
Sbjct: 398 *KLLPSAPVKRGSPQDTPG*KSHKQKVLQLGHWMRH 291
Score = 95.9 bits (203), Expect(2) = 3e-023
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = +3 / +3
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTLH 347
LQR+ H SQVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD PTLH
Sbjct: 198 LQRASHHSQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTLH 374
Score = 34.5 bits (69), Expect(2) = 3e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 450 AQPGHEPRLHLD 485
AQPGHEPRLHLD
Sbjct: 477 AQPGHEPRLHLD 512
Score = 25.4 bits (49), Expect(3) = 4e-059
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -2
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 307 GTG*GTCEG 281
Score = 22.1 bits (42), Expect(3) = 4e-059
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / -1
Query: 641 QRAPTKRG 618
QRAPTKRG
Sbjct: 659 QRAPTKRG 636
>gb|CD227802.1|CD227802 CCC1_53_C05.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_53_C05_A007 5', mRNA sequence
Length = 604
Score = 313 bits (678), Expect = 3e-084
Identities = 117/133 (87%), Positives = 122/133 (91%)
Frame = +1 / +3
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCG
Sbjct: 168 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCG 347
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAH 513
DPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAMSRDFTW QALGIRFAH
Sbjct: 348 DPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAMSRDFTWTQALGIRFAH 527
Query: 514 HHLYVAAQRTPRW 552
HHLYV A +TP+W
Sbjct: 528 HHLYVGAAQTPKW 566
Score = 218 bits (471), Expect(2) = 4e-057
Identities = 88/96 (91%), Positives = 90/96 (93%)
Frame = -3 / -1
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HLGV A T*RWWCAKRMPSAW+QVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK
Sbjct: 565 HLGVWAAPT*RWWCAKRMPSAWVQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK 386
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
*KLLPSAPVKRGSPQDTPG*KSHKQ VLQLGHWMRH
Sbjct: 385 *KLLPSAPVKRGSPQDTPG*KSHKQKVLQLGHWMRH 278
Score = 95.9 bits (203), Expect(2) = 3e-023
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = +3 / +2
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTLH 347
LQR+ H SQVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD PTLH
Sbjct: 185 LQRASHHSQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTLH 361
Score = 34.5 bits (69), Expect(2) = 3e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 450 AQPGHEPRLHLD 485
AQPGHEPRLHLD
Sbjct: 464 AQPGHEPRLHLD 499
Score = 25.4 bits (49), Expect(2) = 4e-057
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -2
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 294 GTG*GTCEG 268
>gb|BG487560.1|BG487560 EM1_67_E09.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 594
Score = 312 bits (676), Expect = 6e-084
Identities = 117/133 (87%), Positives = 121/133 (90%)
Frame = +1 / +1
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCG
Sbjct: 160 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCG 339
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAH 513
DPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAMSRDFTWIQALGIRFAH
Sbjct: 340 DPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAMSRDFTWIQALGIRFAH 519
Query: 514 HHLYVAAQRTPRW 552
HHLYV A P+W
Sbjct: 520 HHLYVGAAXNPKW 558
Score = 217 bits (468), Expect(2) = 1e-056
Identities = 88/96 (91%), Positives = 89/96 (92%)
Frame = -3 / -2
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HLG A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK
Sbjct: 557 HLGFXAAPT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK 378
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
*KLLPSAPVKRGSPQDTPG*KSHKQ VLQLGHWMRH
Sbjct: 377 *KLLPSAPVKRGSPQDTPG*KSHKQKVLQLGHWMRH 270
Score = 95.9 bits (203), Expect(2) = 3e-023
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = +3 / +3
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTLH 347
LQR+ H SQVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD PTLH
Sbjct: 177 LQRASHHSQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTLH 353
Score = 34.5 bits (69), Expect(2) = 3e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 450 AQPGHEPRLHLD 485
AQPGHEPRLHLD
Sbjct: 456 AQPGHEPRLHLD 491
Score = 25.4 bits (49), Expect(2) = 1e-056
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -3
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 286 GTG*GTCEG 260
>gb|BG739542.1|BG739542 EM1_82_B10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 542
Score = 304 bits (658), Expect = 2e-081
Identities = 115/127 (90%), Positives = 118/127 (92%)
Frame = +1 / +1
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCG
Sbjct: 160 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCG 339
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAH 513
DPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAMSRDFTWIQALGIRFAH
Sbjct: 340 DPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAMSRDFTWIQALGIRFAH 519
Query: 514 HHLYVAA 534
HHLYV A
Sbjct: 520 HHLYVGA 540
Score = 211 bits (455), Expect(2) = 7e-055
Identities = 85/90 (94%), Positives = 86/90 (95%)
Frame = -3 / -1
Query: 533 AAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK*KLLPS 354
A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK*KLLPS
Sbjct: 539 APT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK*KLLPS 360
Query: 353 APVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
APVKRGSPQDTPG*KSHKQ VLQLGHWMRH
Sbjct: 359 APVKRGSPQDTPG*KSHKQKVLQLGHWMRH 270
Score = 95.9 bits (203), Expect(2) = 3e-023
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = +3 / +3
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTLH 347
LQR+ H SQVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD PTLH
Sbjct: 177 LQRASHHSQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTLH 353
Score = 34.5 bits (69), Expect(2) = 3e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 450 AQPGHEPRLHLD 485
AQPGHEPRLHLD
Sbjct: 456 AQPGHEPRLHLD 491
Score = 25.4 bits (49), Expect(2) = 7e-055
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -2
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 286 GTG*GTCEG 260
>gb|CD229676.1|CD229676 CCC1_18_F05.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_18_F05_A007 5', mRNA sequence
Length = 549
Score = 300 bits (649), Expect = 3e-080
Identities = 113/124 (91%), Positives = 115/124 (92%)
Frame = +1 / +1
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCG
Sbjct: 178 PVLAVASNARATTLKCTNTKDNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCG 357
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAH 513
DPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAMSRDFTWIQALGIRFAH
Sbjct: 358 DPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAMSRDFTWIQALGIRFAH 537
Query: 514 HHLY 525
HHLY
Sbjct: 538 HHLY 549
Score = 207 bits (447), Expect(2) = 8e-054
Identities = 83/87 (95%), Positives = 84/87 (96%)
Frame = -3 / -2
Query: 524 *RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK*KLLPSAPV 345
*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK*KLLPSAPV
Sbjct: 548 *RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK*KLLPSAPV 369
Query: 344 KRGSPQDTPG*KSHKQNVLQLGHWMRH 264
KRGSPQDTPG*KSHKQ VLQLGHWMRH
Sbjct: 368 KRGSPQDTPG*KSHKQKVLQLGHWMRH 288
Score = 92.7 bits (196), Expect(2) = 3e-022
Identities = 37/59 (62%), Positives = 41/59 (69%)
Frame = +3 / +3
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTLH 347
LQR+ H SQVHQHQ QQDHLQRHLQ+ +PSQVPHPVP+LQD PTLH
Sbjct: 195 LQRASHHSQVHQHQGQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTLH 371
Score = 34.5 bits (69), Expect(2) = 3e-022
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 450 AQPGHEPRLHLD 485
AQPGHEPRLHLD
Sbjct: 474 AQPGHEPRLHLD 509
Score = 25.4 bits (49), Expect(2) = 8e-054
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -3
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 304 GTG*GTCEG 278
>gb|CN126384.1|CN126384 RHOH1_16_G06.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_16_G06_A002 5', mRNA sequence
Length = 801
Score = 228 bits (492), Expect(2) = 4e-080
Identities = 93/105 (88%), Positives = 97/105 (92%)
Frame = +1 / +1
Query: 742 VPITAEDSRIHNYGVREDDGDTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSN 921
+PITAEDSRIHNYGV EDD D+LAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTS
Sbjct: 412 LPITAEDSRIHNYGVTEDDDDSLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSK 591
Query: 922 MPVMGGAPDYLSSDLFSTDCAVARFGGRRHQQATAANIAMLTDDD 1056
MPVMGGAP+YLSSDLFSTDCAVARF G RHQ A A NIAM+TDDD
Sbjct: 592 MPVMGGAPNYLSSDLFSTDCAVARFRGGRHQAAPAVNIAMVTDDD 726
Score = 215 bits (465), Expect(3) = 6e-059
Identities = 83/107 (77%), Positives = 88/107 (82%)
Frame = +1 / +1
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCG
Sbjct: 145 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCG 324
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRD 474
DPRFTGADGNNFYFHG KD+DFCIVSDA L I A N ++ D
Sbjct: 325 DPRFTGADGNNFYFHGNKDKDFCIVSDADLPITAEDSRIHNYGVTED 465
Score = 173 bits (372), Expect(3) = 2e-073
Identities = 78/90 (86%), Positives = 82/90 (91%)
Frame = -3 / -2
Query: 1013 WCRRPPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*N 834
W R P RATAQSVEKRSEER* GAPPMTG+L+VTLRLLT*SGR*VWPSTP TSSVRS*N
Sbjct: 683 WWRPPRNRATAQSVEKRSEER*FGAPPMTGILEVTLRLLT*SGR*VWPSTPWTSSVRS*N 504
Query: 833 LKPRSRCARVSPSSSLTP*LWIRESSAVMG 744
LKPRSRCAR+S SSS+TP*LWI ESSAVMG
Sbjct: 503 LKPRSRCARLSSSSSVTP*LWILESSAVMG 414
Score = 123 bits (264), Expect(3) = 2e-073
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = -3 / -2
Query: 434 ALMWRAASETMQKSRSFLPWK*KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
A+M R+ASETMQKS S LPWK*KLLPSAPVKRGSPQDTPG*KSHKQ VLQLGHWMRH
Sbjct: 425 AVMGRSASETMQKSLSLLPWK*KLLPSAPVKRGSPQDTPG*KSHKQKVLQLGHWMRH 255
Score = 95.9 bits (203), Expect(2) = 4e-080
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = +3 / +3
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTLH 347
LQR+ H SQVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD PTLH
Sbjct: 162 LQRASHHSQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTLH 338
Score = 89.5 bits (189), Expect(2) = 4e-022
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = -2 / -1
Query: 1074 CYSFHVVVVGEHGNISGGGLLVSASAEACDGAXXXXXXXXXXVRRASHDGHVGCDVEAVD 895
C VVVG+HGNI+GG LV+++A++CDG V RA+HDGH+G DVEAVD
Sbjct: 744 CVYLFQVVVGDHGNINGGRGLVASAAKSCDGTVGGEEVGGEVVWRAAHDGHLGGDVEAVD 565
Query: 894 VVRAVGLAQ 868
VVRAVGLAQ
Sbjct: 564 VVRAVGLAQ 538
Score = 40.5 bits (82), Expect(2) = 4e-022
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2 / -1
Query: 327 GHAGIEVAQAECLAAWALDE 268
GHAG+EVAQAE LAA ALDE
Sbjct: 318 GHAGVEVAQAESLAAGALDE 259
Score = 29.0 bits (57), Expect(3) = 6e-059
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / +2
Query: 1022 PPLILPCSPTTT 1057
PPLILP SPTTT
Sbjct: 692 PPLILPWSPTTT 727
Score = 29.0 bits (57), Expect(3) = 6e-059
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 888 GLRQQPQRHIQ 920
GLRQQPQRH+Q
Sbjct: 558 GLRQQPQRHLQ 590
Score = 25.4 bits (49), Expect(3) = 2e-073
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -3
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 271 GTG*GTCEG 245
>gb|CW245585.1|CW245585 104_706_11221046_116_35081_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221046, DNA
sequence
Length = 690
Score = 210 bits (452), Expect(2) = 4e-080
Identities = 77/89 (86%), Positives = 82/89 (92%)
Frame = +1 / +3
Query: 286 CKTFCLCDFYPGVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAM 465
C +CDFYPGVSCGDPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAM
Sbjct: 348 CSIHAVCDFYPGVSCGDPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAM 527
Query: 466 SRDFTWIQALGIRFAHHHLYVAAQRTPRW 552
SRDFTWIQALGIRFAHHHLYV A++TP+W
Sbjct: 528 SRDFTWIQALGIRFAHHHLYVGARQTPQW 614
Score = 184 bits (396), Expect(2) = 4e-049
Identities = 76/83 (91%), Positives = 77/83 (92%)
Frame = -3 / -3
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
H GV A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK
Sbjct: 613 HWGVWRAPT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK 434
Query: 371 *KLLPSAPVKRGSPQDTPG*KSH 303
*KLLPSAPVKRGSPQDTPG*KSH
Sbjct: 433 *KLLPSAPVKRGSPQDTPG*KSH 365
Score = 111 bits (236), Expect(2) = 4e-080
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = +1 / +1
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFC 300
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFC
Sbjct: 130 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFC 276
Score = 91.3 bits (193), Expect(2) = 5e-021
Identities = 34/41 (82%), Positives = 38/41 (92%)
Frame = +3 / +3
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQD 293
LQR+ H SQVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD
Sbjct: 147 LQRASHHSQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQD 269
Score = 34.5 bits (69), Expect(2) = 5e-021
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 450 AQPGHEPRLHLD 485
AQPGHEPRLHLD
Sbjct: 512 AQPGHEPRLHLD 547
Score = 33.1 bits (66), Expect(2) = 4e-049
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3 / -2
Query: 302 KQNVLQLGHWMRH 264
+Q VLQLGHWMRH
Sbjct: 278 QQKVLQLGHWMRH 240
>gb|CW245586.1|CW245586 104_706_11221046_116_37600_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221046, DNA
sequence
Length = 680
Score = 210 bits (452), Expect(2) = 4e-080
Identities = 77/89 (86%), Positives = 81/89 (91%)
Frame = +1 / +3
Query: 286 CKTFCLCDFYPGVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAM 465
C +CDFYPGVSCGDPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAM
Sbjct: 348 CSIHAVCDFYPGVSCGDPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAM 527
Query: 466 SRDFTWIQALGIRFAHHHLYVAAQRTPRW 552
SRDFTWIQALGIRFAHHHLYV A +TP+W
Sbjct: 528 SRDFTWIQALGIRFAHHHLYVGAAKTPKW 614
Score = 189 bits (408), Expect(2) = 8e-051
Identities = 78/83 (93%), Positives = 79/83 (95%)
Frame = -3 / -2
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HLGVL A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK
Sbjct: 613 HLGVLAAPT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK 434
Query: 371 *KLLPSAPVKRGSPQDTPG*KSH 303
*KLLPSAPVKRGSPQDTPG*KSH
Sbjct: 433 *KLLPSAPVKRGSPQDTPG*KSH 365
Score = 111 bits (236), Expect(2) = 4e-080
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = +1 / +1
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFC 300
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFC
Sbjct: 130 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFC 276
Score = 91.3 bits (193), Expect(2) = 5e-021
Identities = 34/41 (82%), Positives = 38/41 (92%)
Frame = +3 / +3
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQD 293
LQR+ H SQVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD
Sbjct: 147 LQRASHHSQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQD 269
Score = 34.5 bits (69), Expect(2) = 5e-021
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 450 AQPGHEPRLHLD 485
AQPGHEPRLHLD
Sbjct: 512 AQPGHEPRLHLD 547
Score = 33.1 bits (66), Expect(2) = 8e-051
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3 / -1
Query: 302 KQNVLQLGHWMRH 264
+Q VLQLGHWMRH
Sbjct: 278 QQKVLQLGHWMRH 240
>gb|CN126295.1|CN126295 RHOH1_16_G06.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_16_G06_A002 3', mRNA sequence
Length = 780
Score = 228 bits (492), Expect(2) = 2e-079
Identities = 93/105 (88%), Positives = 97/105 (92%)
Frame = +1 / +3
Query: 742 VPITAEDSRIHNYGVREDDGDTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSN 921
+PITAEDSRIHNYGV EDD D+LAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTS
Sbjct: 258 LPITAEDSRIHNYGVTEDDDDSLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSK 437
Query: 922 MPVMGGAPDYLSSDLFSTDCAVARFGGRRHQQATAANIAMLTDDD 1056
MPVMGGAP+YLSSDLFSTDCAVARF G RHQ A A NIAM+TDDD
Sbjct: 438 MPVMGGAPNYLSSDLFSTDCAVARFRGGRHQAAPAVNIAMVTDDD 572
Score = 211 bits (455), Expect(3) = 1e-057
Identities = 80/103 (77%), Positives = 86/103 (83%)
Frame = +1 / +3
Query: 166 VGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCGDPRF 345
V SN R+TT+KCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCGDPRF
Sbjct: 3 VASNARATTVKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCGDPRF 182
Query: 346 TGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRD 474
TGADGNNFYFHG KD+DFCIVSDA L I A N ++ D
Sbjct: 183 TGADGNNFYFHGNKDKDFCIVSDADLPITAEDSRIHNYGVTED 311
Score = 173 bits (372), Expect(3) = 2e-073
Identities = 78/90 (86%), Positives = 82/90 (91%)
Frame = -3 / -3
Query: 1013 WCRRPPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*N 834
W R P RATAQSVEKRSEER* GAPPMTG+L+VTLRLLT*SGR*VWPSTP TSSVRS*N
Sbjct: 529 WWRPPRNRATAQSVEKRSEER*FGAPPMTGILEVTLRLLT*SGR*VWPSTPWTSSVRS*N 350
Query: 833 LKPRSRCARVSPSSSLTP*LWIRESSAVMG 744
LKPRSRCAR+S SSS+TP*LWI ESSAVMG
Sbjct: 349 LKPRSRCARLSSSSSVTP*LWILESSAVMG 260
Score = 123 bits (264), Expect(3) = 2e-073
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = -3 / -3
Query: 434 ALMWRAASETMQKSRSFLPWK*KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
A+M R+ASETMQKS S LPWK*KLLPSAPVKRGSPQDTPG*KSHKQ VLQLGHWMRH
Sbjct: 271 AVMGRSASETMQKSLSLLPWK*KLLPSAPVKRGSPQDTPG*KSHKQKVLQLGHWMRH 101
Score = 93.6 bits (198), Expect(2) = 2e-079
Identities = 37/59 (62%), Positives = 41/59 (69%)
Frame = +3 / +2
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTLH 347
LQR+ H QVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD PTLH
Sbjct: 8 LQRASHHCQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTLH 184
Score = 89.0 bits (188), Expect(2) = 5e-022
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = -2 / -2
Query: 1074 CYSFHVVVVGEHGNISGGGLLVSASAEACDGAXXXXXXXXXXVRRASHDGHVGCDVEAVD 895
C VVVG+HGNI+GG LV+++A++CDG V RA+HDGH+G DVEAVD
Sbjct: 590 CVYLFHVVVGDHGNINGGRGLVASAAKSCDGTVGGEEVGGEVVWRAAHDGHLGGDVEAVD 411
Query: 894 VVRAVGLAQ 868
VVRAVGLAQ
Sbjct: 410 VVRAVGLAQ 384
Score = 40.5 bits (82), Expect(2) = 5e-022
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2 / -2
Query: 327 GHAGIEVAQAECLAAWALDE 268
GHAG+EVAQAE LAA ALDE
Sbjct: 164 GHAGVEVAQAESLAAGALDE 105
Score = 29.0 bits (57), Expect(3) = 1e-057
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / +1
Query: 1022 PPLILPCSPTTT 1057
PPLILP SPTTT
Sbjct: 538 PPLILPWSPTTT 573
Score = 29.0 bits (57), Expect(3) = 1e-057
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +2
Query: 888 GLRQQPQRHIQ 920
GLRQQPQRH+Q
Sbjct: 404 GLRQQPQRHLQ 436
Score = 25.4 bits (49), Expect(3) = 2e-073
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 117 GTG*GTCEG 91
>gb|CD225005.1|CD225005 CCC1_37_F06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_37_F06_A007 5', mRNA sequence
Length = 553
Score = 297 bits (643), Expect = 2e-079
Identities = 114/127 (89%), Positives = 117/127 (92%)
Frame = +1 / +1
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCG
Sbjct: 172 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCG 351
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAH 513
DPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAMSRDFT IQALGIRFAH
Sbjct: 352 DPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAMSRDFT*IQALGIRFAH 531
Query: 514 HHLYVAA 534
HHLYV A
Sbjct: 532 HHLYVGA 552
Score = 211 bits (455), Expect(2) = 7e-055
Identities = 85/90 (94%), Positives = 86/90 (95%)
Frame = -3 / -3
Query: 533 AAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK*KLLPS 354
A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK*KLLPS
Sbjct: 551 APT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK*KLLPS 372
Query: 353 APVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
APVKRGSPQDTPG*KSHKQ VLQLGHWMRH
Sbjct: 371 APVKRGSPQDTPG*KSHKQKVLQLGHWMRH 282
Score = 95.9 bits (203), Expect(2) = 2e-022
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = +3 / +3
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTLH 347
LQR+ H SQVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD PTLH
Sbjct: 189 LQRASHHSQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTLH 365
Score = 32.2 bits (64), Expect(2) = 2e-022
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 450 AQPGHEPRLHLD 485
AQPGHEPRLHL+
Sbjct: 468 AQPGHEPRLHLN 503
Score = 25.4 bits (49), Expect(2) = 7e-055
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 298 GTG*GTCEG 272
>gb|CW072243.1|CW072243 104_325_10592151_116_30541 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592151, DNA
sequence
Length = 636
Score = 155 bits (334), Expect(3) = 3e-078
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +1 / +1
Query: 316 PGVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQAL 495
PGVSCGDPRFTG DGNNFYFHGKKD DFCI+SDA LHINAHFIGKRNPAMSRDFTWIQA+
Sbjct: 1 PGVSCGDPRFTGGDGNNFYFHGKKDGDFCILSDANLHINAHFIGKRNPAMSRDFTWIQAV 180
Query: 496 GIRF 507
GIRF
Sbjct: 181 GIRF 192
Score = 138 bits (297), Expect(3) = 5e-064
Identities = 57/63 (90%), Positives = 58/63 (92%)
Frame = -3 / -2
Query: 506 KRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK*KLLPSAPVKRGSPQ 327
KRMP+AWI VKSRLMAGLRLPMKCALMWR ASE MQKS SFLPWK*KLLPS PVKRGSPQ
Sbjct: 191 KRMPTAWIHVKSRLMAGLRLPMKCALMWRLASERMQKSPSFLPWK*KLLPSPPVKRGSPQ 12
Query: 326 DTP 318
DTP
Sbjct: 11 DTP 3
Score = 103 bits (220), Expect(3) = 3e-078
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +1 / +1
Query: 796 DGDTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAP 945
+ D+LAH DLGFKF+DLTDDVHGVLGQTYR DY+N L+V+S MPVMGGAP
Sbjct: 478 EDDSLAHFDLGFKFFDLTDDVHGVLGQTYRADYINQLSVSSKMPVMGGAP 627
Score = 88.1 bits (186), Expect(3) = 5e-064
Identities = 37/50 (74%), Positives = 42/50 (84%)
Frame = -3 / -2
Query: 944 GAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*NLKPRSRCARVSPS 795
GAPPMTG+L++TL L *S R*VWP TPCTSSVRS NL PRS+CAR+S S
Sbjct: 626 GAPPMTGILELTLSWLM*SAR*VWPRTPCTSSVRSKNLNPRSKCARLSSS 477
Score = 73.9 bits (155), Expect(3) = 3e-078
Identities = 30/60 (50%), Positives = 35/60 (58%)
Frame = +1 / +1
Query: 619 PRFVGARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
P GA W P P L+ +LRG F IVA+VVPI+ EDSR+HNYGV EDD
Sbjct: 307 PAETGAVWEPAAVPGLTVTRTAAANGVRVQLRGVFDIVANVVPISEEDSRVHNYGVTEDD 486
Score = 58.8 bits (122), Expect(3) = 5e-064
Identities = 28/60 (46%), Positives = 31/60 (51%)
Frame = -3 / -2
Query: 797 SSSLTP*LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGAVGGDQRAPTKRG 618
SSS+TP*LW RESS++MGTTLATM P T S G G AP G
Sbjct: 485 SSSVTP*LWTRESSSLMGTTLATMSNTPLSCTLTPLAAAVRVTVSPGTAAGSHTAPVSAG 306
>gb|CW170038.1|CW170038 104_580_11154992_148_36515_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11154992, DNA
sequence
Length = 683
Score = 291 bits (629), Expect = 2e-077
Identities = 121/146 (82%), Positives = 125/146 (85%)
Frame = +1 / -3
Query: 619 PRFVGARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
PRFVGARWSPPTAPALS ELRG FRIVA+VVPITAEDSRIHNYGV EDD
Sbjct: 612 PRFVGARWSPPTAPALSVTRTARVNTVVIELRGVFRIVANVVPITAEDSRIHNYGVTEDD 433
Query: 799 GDTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTD 978
D+LAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTS MPVMGGAP+YLSSDLFSTD
Sbjct: 432 DDSLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSKMPVMGGAPNYLSSDLFSTD 253
Query: 979 CAVARFGGRRHQQATAANIAMLTDDD 1056
CAVARF G RHQ A A NIAM+TDDD
Sbjct: 252 CAVARFRGGRHQAAPAVNIAMVTDDD 175
Score = 228 bits (492), Expect = 2e-058
Identities = 104/132 (78%), Positives = 108/132 (81%)
Frame = -3 / +2
Query: 1013 WCRRPPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*N 834
W R P RATAQSVEKRSEER* GAPPMTG+L+VTLRLLT*SGR*VWPSTP TSSVRS*N
Sbjct: 218 WWRPPRNRATAQSVEKRSEER*FGAPPMTGILEVTLRLLT*SGR*VWPSTPWTSSVRS*N 397
Query: 833 LKPRSRCARVSPSSSLTP*LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGA 654
LKPRSRCAR+S SSS+TP*LWI ESSAVMGTTLATMRK P TD AGA
Sbjct: 398 LKPRSRCARLSSSSSVTP*LWILESSAVMGTTLATMRKTPLSSMTTVLTRAVRVTDRAGA 577
Query: 653 VGGDQRAPTKRG 618
VGGDQRAPTKRG
Sbjct: 578 VGGDQRAPTKRG 613
Score = 89.0 bits (188), Expect(2) = 5e-022
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = -2 / +1
Query: 1074 CYSFHVVVVGEHGNISGGGLLVSASAEACDGAXXXXXXXXXXVRRASHDGHVGCDVEAVD 895
C VVVG+HGNI+GG LV+++A++CDG V RA+HDGH+G DVEAVD
Sbjct: 157 CVYLFHVVVGDHGNINGGRGLVASAAKSCDGTVGGEEVGGEVVWRAAHDGHLGGDVEAVD 336
Query: 894 VVRAVGLAQ 868
VVRAVGLAQ
Sbjct: 337 VVRAVGLAQ 363
Score = 37.3 bits (75), Expect(2) = 5e-022
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / +1
Query: 756 GGDGHYAGDDAEGAPEL 706
GGDGH GDDAE APEL
Sbjct: 475 GGDGHDVGDDAEDAPEL 525
>gb|CW245587.1|CW245587 104_706_11221046_148_35077_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221046, DNA
sequence
Length = 696
Score = 291 bits (629), Expect = 2e-077
Identities = 121/146 (82%), Positives = 125/146 (85%)
Frame = +1 / -2
Query: 619 PRFVGARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
PRFVGARWSPPTAPALS ELRG FRIVA+VVPITAEDSRIHNYGV EDD
Sbjct: 623 PRFVGARWSPPTAPALSVTRTARVNTVVIELRGVFRIVANVVPITAEDSRIHNYGVTEDD 444
Query: 799 GDTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTD 978
D+LAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTS MPVMGGAP+YLSSDLFSTD
Sbjct: 443 DDSLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSKMPVMGGAPNYLSSDLFSTD 264
Query: 979 CAVARFGGRRHQQATAANIAMLTDDD 1056
CAVARF G RHQ A A NIAM+TDDD
Sbjct: 263 CAVARFRGGRHQAAPAVNIAMVTDDD 186
Score = 228 bits (492), Expect = 2e-058
Identities = 104/132 (78%), Positives = 108/132 (81%)
Frame = -3 / +1
Query: 1013 WCRRPPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*N 834
W R P RATAQSVEKRSEER* GAPPMTG+L+VTLRLLT*SGR*VWPSTP TSSVRS*N
Sbjct: 229 WWRPPRNRATAQSVEKRSEER*FGAPPMTGILEVTLRLLT*SGR*VWPSTPWTSSVRS*N 408
Query: 833 LKPRSRCARVSPSSSLTP*LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGA 654
LKPRSRCAR+S SSS+TP*LWI ESSAVMGTTLATMRK P TD AGA
Sbjct: 409 LKPRSRCARLSSSSSVTP*LWILESSAVMGTTLATMRKTPLSSMTTVLTRAVRVTDRAGA 588
Query: 653 VGGDQRAPTKRG 618
VGGDQRAPTKRG
Sbjct: 589 VGGDQRAPTKRG 624
Score = 89.0 bits (188), Expect(2) = 5e-022
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = -2 / +3
Query: 1074 CYSFHVVVVGEHGNISGGGLLVSASAEACDGAXXXXXXXXXXVRRASHDGHVGCDVEAVD 895
C VVVG+HGNI+GG LV+++A++CDG V RA+HDGH+G DVEAVD
Sbjct: 168 CVYLFHVVVGDHGNINGGRGLVASAAKSCDGTVGGEEVGGEVVWRAAHDGHLGGDVEAVD 347
Query: 894 VVRAVGLAQ 868
VVRAVGLAQ
Sbjct: 348 VVRAVGLAQ 374
Score = 37.3 bits (75), Expect(2) = 5e-022
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / +3
Query: 756 GGDGHYAGDDAEGAPEL 706
GGDGH GDDAE APEL
Sbjct: 486 GGDGHDVGDDAEDAPEL 536
>gb|CX610525.1|CX610525 ANR1_19_F05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_19_F05_A002 3', mRNA sequence
Length = 671
Score = 291 bits (629), Expect = 2e-077
Identities = 121/146 (82%), Positives = 125/146 (85%)
Frame = +1 / +2
Query: 619 PRFVGARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
PRFVGARWSPPTAPALS ELRG FRIVA+VVPITAEDSRIHNYGV EDD
Sbjct: 71 PRFVGARWSPPTAPALSVTRTARVNTVVIELRGVFRIVANVVPITAEDSRIHNYGVTEDD 250
Query: 799 GDTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTD 978
D+LAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTS MPVMGGAP+YLSSDLFSTD
Sbjct: 251 DDSLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSKMPVMGGAPNYLSSDLFSTD 430
Query: 979 CAVARFGGRRHQQATAANIAMLTDDD 1056
CAVARF G RHQ A A NIAM+TDDD
Sbjct: 431 CAVARFRGGRHQAAPAVNIAMVTDDD 508
Score = 228 bits (492), Expect = 2e-058
Identities = 104/132 (78%), Positives = 108/132 (81%)
Frame = -3 / -3
Query: 1013 WCRRPPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*N 834
W R P RATAQSVEKRSEER* GAPPMTG+L+VTLRLLT*SGR*VWPSTP TSSVRS*N
Sbjct: 465 WWRPPRNRATAQSVEKRSEER*FGAPPMTGILEVTLRLLT*SGR*VWPSTPWTSSVRS*N 286
Query: 833 LKPRSRCARVSPSSSLTP*LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGA 654
LKPRSRCAR+S SSS+TP*LWI ESSAVMGTTLATMRK P TD AGA
Sbjct: 285 LKPRSRCARLSSSSSVTP*LWILESSAVMGTTLATMRKTPLSSMTTVLTRAVRVTDRAGA 106
Query: 653 VGGDQRAPTKRG 618
VGGDQRAPTKRG
Sbjct: 105 VGGDQRAPTKRG 70
Score = 89.0 bits (188), Expect(2) = 5e-022
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = -2 / -2
Query: 1074 CYSFHVVVVGEHGNISGGGLLVSASAEACDGAXXXXXXXXXXVRRASHDGHVGCDVEAVD 895
C VVVG+HGNI+GG LV+++A++CDG V RA+HDGH+G DVEAVD
Sbjct: 526 CVYLFHVVVGDHGNINGGRGLVASAAKSCDGTVGGEEVGGEVVWRAAHDGHLGGDVEAVD 347
Query: 894 VVRAVGLAQ 868
VVRAVGLAQ
Sbjct: 346 VVRAVGLAQ 320
Score = 37.3 bits (75), Expect(2) = 5e-022
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / -2
Query: 756 GGDGHYAGDDAEGAPEL 706
GGDGH GDDAE APEL
Sbjct: 208 GGDGHDVGDDAEDAPEL 158
>gb|BG556244.1|BG556244 EM1_67_E09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 578
Score = 287 bits (622), Expect = 2e-076
Identities = 120/145 (82%), Positives = 124/145 (85%)
Frame = +1 / +3
Query: 622 RFVGARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDDG 801
RFVGARWSPPTAPALS ELRG FRIVA+VVPITAEDSRIHNYGV EDD
Sbjct: 3 RFVGARWSPPTAPALSVTRTARVNTVVIELRGVFRIVANVVPITAEDSRIHNYGVTEDDD 182
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTDC 981
D+LAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTS MPVMGGAP+YLSSDLFSTDC
Sbjct: 183 DSLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSKMPVMGGAPNYLSSDLFSTDC 362
Query: 982 AVARFGGRRHQQATAANIAMLTDDD 1056
AVARF G RHQ A A NIAM+TDDD
Sbjct: 363 AVARFRGGRHQAAPAVNIAMVTDDD 437
Score = 225 bits (486), Expect = 1e-057
Identities = 103/131 (78%), Positives = 107/131 (81%)
Frame = -3 / -2
Query: 1013 WCRRPPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*N 834
W R P RATAQSVEKRSEER* GAPPMTG+L+VTLRLLT*SGR*VWPSTP TSSVRS*N
Sbjct: 394 WWRPPRNRATAQSVEKRSEER*FGAPPMTGILEVTLRLLT*SGR*VWPSTPWTSSVRS*N 215
Query: 833 LKPRSRCARVSPSSSLTP*LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGA 654
LKPRSRCAR+S SSS+TP*LWI ESSAVMGTTLATMRK P TD AGA
Sbjct: 214 LKPRSRCARLSSSSSVTP*LWILESSAVMGTTLATMRKTPLSSMTTVLTRAVRVTDRAGA 35
Query: 653 VGGDQRAPTKR 621
VGGDQRAPTKR
Sbjct: 34 VGGDQRAPTKR 2
Score = 89.0 bits (188), Expect(2) = 5e-022
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = -2 / -1
Query: 1074 CYSFHVVVVGEHGNISGGGLLVSASAEACDGAXXXXXXXXXXVRRASHDGHVGCDVEAVD 895
C VVVG+HGNI+GG LV+++A++CDG V RA+HDGH+G DVEAVD
Sbjct: 455 CVYLFHVVVGDHGNINGGRGLVASAAKSCDGTVGGEEVGGEVVWRAAHDGHLGGDVEAVD 276
Query: 894 VVRAVGLAQ 868
VVRAVGLAQ
Sbjct: 275 VVRAVGLAQ 249
Score = 37.3 bits (75), Expect(2) = 5e-022
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / -1
Query: 756 GGDGHYAGDDAEGAPEL 706
GGDGH GDDAE APEL
Sbjct: 137 GGDGHDVGDDAEDAPEL 87
>gb|CD223319.1|CD223319 CCC1_27_G12.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_27_G12_A007 3', mRNA sequence
Length = 605
Score = 287 bits (621), Expect = 2e-076
Identities = 120/146 (82%), Positives = 124/146 (84%)
Frame = +1 / +3
Query: 619 PRFVGARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
PRFVGARWSPPTAPALS ELRG FRIVA+VVPITAEDSRIHNYGV EDD
Sbjct: 21 PRFVGARWSPPTAPALSVTRTARVNTVVVELRGVFRIVANVVPITAEDSRIHNYGVTEDD 200
Query: 799 GDTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTD 978
D+LAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTS MPVMGGAP+YLSSDLFSTD
Sbjct: 201 DDSLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSKMPVMGGAPNYLSSDLFSTD 380
Query: 979 CAVARFGGRRHQQATAANIAMLTDDD 1056
CAVAR G RHQ A A NIAM+TDDD
Sbjct: 381 CAVARSRGGRHQAAPAVNIAMVTDDD 458
Score = 228 bits (492), Expect = 2e-058
Identities = 104/132 (78%), Positives = 108/132 (81%)
Frame = -3 / -2
Query: 1013 WCRRPPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*N 834
W R P RATAQSVEKRSEER* GAPPMTG+L+VTLRLLT*SGR*VWPSTP TSSVRS*N
Sbjct: 415 WWRPPRDRATAQSVEKRSEER*FGAPPMTGILEVTLRLLT*SGR*VWPSTPWTSSVRS*N 236
Query: 833 LKPRSRCARVSPSSSLTP*LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGA 654
LKPRSRCAR+S SSS+TP*LWI ESSAVMGTTLATMRK P TD AGA
Sbjct: 235 LKPRSRCARLSSSSSVTP*LWILESSAVMGTTLATMRKTPLSSTTTVLTRAVRVTDRAGA 56
Query: 653 VGGDQRAPTKRG 618
VGGDQRAPTKRG
Sbjct: 55 VGGDQRAPTKRG 20
Score = 88.6 bits (187), Expect(2) = 7e-022
Identities = 40/69 (57%), Positives = 48/69 (69%)
Frame = -2 / -1
Query: 1074 CYSFHVVVVGEHGNISGGGLLVSASAEACDGAXXXXXXXXXXVRRASHDGHVGCDVEAVD 895
C VVVG+HGNI+GG LV+++A +CDG V RA+HDGH+G DVEAVD
Sbjct: 476 CVYLFHVVVGDHGNINGGRGLVASAARSCDGTVGGEEVGGEVVWRAAHDGHLGGDVEAVD 297
Query: 894 VVRAVGLAQ 868
VVRAVGLAQ
Sbjct: 296 VVRAVGLAQ 270
Score = 37.3 bits (75), Expect(2) = 7e-022
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / -1
Query: 756 GGDGHYAGDDAEGAPEL 706
GGDGH GDDAE APEL
Sbjct: 158 GGDGHDVGDDAEDAPEL 108
>gb|CN127915.1|CN127915 RHOH1_25_H02.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_25_H02_A002 5', mRNA sequence
Length = 640
Score = 220 bits (474), Expect(2) = 9e-076
Identities = 84/103 (81%), Positives = 88/103 (85%)
Frame = +1 / +2
Query: 244 NARCPHKCLIQCPSCKTFCLCDFYPGVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAAL 423
NAR + KTFCLCDFYPGVSCGDPRFTGADGNNFYFHG KD+DFCIVSDA L
Sbjct: 122 NARATTLKCTNTKNNKTFCLCDFYPGVSCGDPRFTGADGNNFYFHGNKDKDFCIVSDADL 301
Query: 424 HINAHFIGKRNPAMSRDFTWIQALGIRFAHHHLYVAAQRTPRW 552
HINAHFIGKRNPAMSRDFTWIQALGIRFAHHHLYV A +TP+W
Sbjct: 302 HINAHFIGKRNPAMSRDFTWIQALGIRFAHHHLYVGAAKTPKW 430
Score = 198 bits (426), Expect(2) = 3e-065
Identities = 82/88 (93%), Positives = 83/88 (94%)
Frame = -3 / -2
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HLGVL A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK
Sbjct: 429 HLGVLAAPT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK 250
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVL 288
*KLLPSAPVKRGSPQDTPG*KSHKQ VL
Sbjct: 249 *KLLPSAPVKRGSPQDTPG*KSHKQKVL 166
Score = 86.3 bits (182), Expect(2) = 9e-076
Identities = 37/51 (72%), Positives = 38/51 (74%)
Frame = +1 / +2
Query: 619 PRFVGARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRI 771
PRFVGARWSPPTAPALS ELRG FRIVA+VVPITAEDSRI
Sbjct: 488 PRFVGARWSPPTAPALSVTRTARVNTVVIELRGVFRIVANVVPITAEDSRI 640
Score = 73.5 bits (154), Expect(2) = 3e-065
Identities = 34/51 (66%), Positives = 34/51 (66%)
Frame = -3 / -2
Query: 770 IRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGAVGGDQRAPTKRG 618
I ESSAVMGTTLATMRK P TD AGAVGGDQRAPTKRG
Sbjct: 639 ILESSAVMGTTLATMRKTPLSSMTTVLTRAVRVTDRAGAVGGDQRAPTKRG 487
>gb|CW490208.1|CW490208 fsbb001f275i13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f275i13, DNA
sequence
Length = 708
Score = 169 bits (363), Expect(3) = 1e-075
Identities = 63/69 (91%), Positives = 66/69 (95%)
Frame = +1 / +2
Query: 301 LCDFYPGVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFT 480
+CDFYPGVSCGDPRFTG DGNNFYFHGKKD DFCI+SDA LHINAHFIGKRNPAMSRDFT
Sbjct: 95 VCDFYPGVSCGDPRFTGGDGNNFYFHGKKDGDFCILSDANLHINAHFIGKRNPAMSRDFT 274
Query: 481 WIQALGIRF 507
WIQA+GIRF
Sbjct: 275 WIQAVGIRF 301
Score = 149 bits (321), Expect(3) = 4e-061
Identities = 62/68 (91%), Positives = 63/68 (92%)
Frame = -3 / -1
Query: 506 KRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK*KLLPSAPVKRGSPQ 327
KRMP+AWI VKSRLMAGLRLPMKCALMWR ASE MQKS SFLPWK*KLLPS PVKRGSPQ
Sbjct: 300 KRMPTAWIHVKSRLMAGLRLPMKCALMWRLASERMQKSPSFLPWK*KLLPSPPVKRGSPQ 121
Query: 326 DTPG*KSH 303
DTPG*KSH
Sbjct: 120 DTPG*KSH 97
Score = 81.7 bits (172), Expect(3) = 1e-075
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +1 / +2
Query: 796 DGDTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVT 915
+ D+LAH DLGFKF+DLTDDVHGVLGQTYR DY+N L+V+
Sbjct: 587 EDDSLAHFDLGFKFFDLTDDVHGVLGQTYRADYINQLSVS 706
Score = 73.9 bits (155), Expect(3) = 1e-075
Identities = 30/60 (50%), Positives = 35/60 (58%)
Frame = +1 / +2
Query: 619 PRFVGARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
P GA W P P L+ +LRG F IVA+VVPI+ EDSR+HNYGV EDD
Sbjct: 416 PAETGAVWEPAAVPGLTVTRTAAANGVRVQLRGVFDIVANVVPISEEDSRVHNYGVTEDD 595
Score = 67.5 bits (141), Expect(3) = 4e-061
Identities = 29/41 (70%), Positives = 33/41 (80%)
Frame = -3 / -1
Query: 917 DVTLRLLT*SGR*VWPSTPCTSSVRS*NLKPRSRCARVSPS 795
++TL L *S R*VWP TPCTSSVRS NL PRS+CAR+S S
Sbjct: 708 ELTLSWLM*SAR*VWPRTPCTSSVRSKNLNPRSKCARLSSS 586
Score = 58.8 bits (122), Expect(3) = 4e-061
Identities = 28/60 (46%), Positives = 31/60 (51%)
Frame = -3 / -1
Query: 797 SSSLTP*LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGAVGGDQRAPTKRG 618
SSS+TP*LW RESS++MGTTLATM P T S G G AP G
Sbjct: 594 SSSVTP*LWTRESSSLMGTTLATMSNTPLSCTLTPLAAAVRVTVSPGTAAGSHTAPVSAG 415
>gb|CW245588.1|CW245588 104_706_11221046_148_37599_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221046, DNA
sequence
Length = 639
Score = 284 bits (614), Expect = 2e-075
Identities = 120/146 (82%), Positives = 124/146 (84%)
Frame = +1 / -3
Query: 619 PRFVGARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
PRFVGAR SPPTAPALS ELRG FRIVA+VVPITAEDSRIHNYGV EDD
Sbjct: 622 PRFVGAR*SPPTAPALSVTRTARVNTVVIELRGVFRIVANVVPITAEDSRIHNYGVTEDD 443
Query: 799 GDTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTD 978
D+LAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTS MPVMGGAP+YLSSDLFSTD
Sbjct: 442 DDSLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSKMPVMGGAPNYLSSDLFSTD 263
Query: 979 CAVARFGGRRHQQATAANIAMLTDDD 1056
CAVARF G RHQ A A NIAM+TDDD
Sbjct: 262 CAVARFRGGRHQAAPAVNIAMVTDDD 185
Score = 224 bits (483), Expect = 3e-057
Identities = 103/132 (78%), Positives = 107/132 (81%)
Frame = -3 / +3
Query: 1013 WCRRPPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*N 834
W R P RATAQSVEKRSEER* GAPPMTG+L+VTLRLLT*SGR*VWPSTP TSSVRS*N
Sbjct: 228 WWRPPRNRATAQSVEKRSEER*FGAPPMTGILEVTLRLLT*SGR*VWPSTPWTSSVRS*N 407
Query: 833 LKPRSRCARVSPSSSLTP*LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGA 654
LKPRSRCAR+S SSS+TP*LWI ESSAVMGTTLATMRK P TD AGA
Sbjct: 408 LKPRSRCARLSSSSSVTP*LWILESSAVMGTTLATMRKTPLSSMTTVLTRAVRVTDRAGA 587
Query: 653 VGGDQRAPTKRG 618
VGGD RAPTKRG
Sbjct: 588 VGGD*RAPTKRG 623
Score = 89.0 bits (188), Expect(2) = 5e-022
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = -2 / +2
Query: 1074 CYSFHVVVVGEHGNISGGGLLVSASAEACDGAXXXXXXXXXXVRRASHDGHVGCDVEAVD 895
C VVVG+HGNI+GG LV+++A++CDG V RA+HDGH+G DVEAVD
Sbjct: 167 CVYLFHVVVGDHGNINGGRGLVASAAKSCDGTVGGEEVGGEVVWRAAHDGHLGGDVEAVD 346
Query: 894 VVRAVGLAQ 868
VVRAVGLAQ
Sbjct: 347 VVRAVGLAQ 373
Score = 37.3 bits (75), Expect(2) = 5e-022
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / +2
Query: 756 GGDGHYAGDDAEGAPEL 706
GGDGH GDDAE APEL
Sbjct: 485 GGDGHDVGDDAEDAPEL 535
>gb|CD227701.1|CD227701 CCC1_53_E01.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_53_E01_A007 3', mRNA sequence
Length = 594
Score = 281 bits (607), Expect = 2e-074
Identities = 117/142 (82%), Positives = 121/142 (85%)
Frame = +1 / +2
Query: 631 GARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDDGDTL 810
GARWSPPTAPALS ELRG FRIVA+VVPITAEDSRIHNYGV EDD D+L
Sbjct: 2 GARWSPPTAPALSVTRTARVNTVVVELRGVFRIVANVVPITAEDSRIHNYGVTEDDDDSL 181
Query: 811 AHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTDCAVA 990
AHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTS MPVMGGAP+YLSSDLFSTDCAVA
Sbjct: 182 AHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSKMPVMGGAPNYLSSDLFSTDCAVA 361
Query: 991 RFGGRRHQQATAANIAMLTDDD 1056
RF G RHQ A A NIAM+TDDD
Sbjct: 362 RFRGGRHQAAPAVNIAMVTDDD 427
Score = 219 bits (472), Expect = 9e-056
Identities = 100/128 (78%), Positives = 104/128 (81%)
Frame = -3 / -1
Query: 1013 WCRRPPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*N 834
W R P RATAQSVEKRSEER* GAPPMTG+L+VTLRLLT*SGR*VWPSTP TSSVRS*N
Sbjct: 384 WWRPPRNRATAQSVEKRSEER*FGAPPMTGILEVTLRLLT*SGR*VWPSTPWTSSVRS*N 205
Query: 833 LKPRSRCARVSPSSSLTP*LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGA 654
LKPRSRCAR+S SSS+TP*LWI ESSAVMGTTLATMRK P TD AGA
Sbjct: 204 LKPRSRCARLSSSSSVTP*LWILESSAVMGTTLATMRKTPLSSTTTVLTRAVRVTDRAGA 25
Query: 653 VGGDQRAP 630
VGGDQRAP
Sbjct: 24 VGGDQRAP 1
Score = 89.0 bits (188), Expect(2) = 5e-022
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = -2 / -3
Query: 1074 CYSFHVVVVGEHGNISGGGLLVSASAEACDGAXXXXXXXXXXVRRASHDGHVGCDVEAVD 895
C VVVG+HGNI+GG LV+++A++CDG V RA+HDGH+G DVEAVD
Sbjct: 445 CVYLFHVVVGDHGNINGGRGLVASAAKSCDGTVGGEEVGGEVVWRAAHDGHLGGDVEAVD 266
Query: 894 VVRAVGLAQ 868
VVRAVGLAQ
Sbjct: 265 VVRAVGLAQ 239
Score = 37.3 bits (75), Expect(2) = 5e-022
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / -3
Query: 756 GGDGHYAGDDAEGAPEL 706
GGDGH GDDAE APEL
Sbjct: 127 GGDGHDVGDDAEDAPEL 77
>gb|CF432714.1|CF432714 NIT1_18_G04.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_18_G04_A002 5', mRNA sequence
Length = 636
Score = 245 bits (529), Expect(3) = 1e-073
Identities = 90/97 (92%), Positives = 93/97 (95%)
Frame = +1 / +3
Query: 262 KCLIQCPSCKTFCLCDFYPGVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHF 441
KCLIQCPSCKTFCLCDFYPGVSCGDPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHF
Sbjct: 219 KCLIQCPSCKTFCLCDFYPGVSCGDPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHF 398
Query: 442 IGKRNPAMSRDFTWIQALGIRFAHHHLYVAAQRTPRW 552
IGKRNPAMSRDFTWIQALGIRFAHHHLYV A +TP+W
Sbjct: 399 IGKRNPAMSRDFTWIQALGIRFAHHHLYVGAAKTPKW 509
Score = 221 bits (478), Expect(2) = 1e-062
Identities = 90/96 (93%), Positives = 91/96 (94%)
Frame = -3 / -3
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
HLGVL A T*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK
Sbjct: 508 HLGVLAAPT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK 329
Query: 371 *KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
*KLLPSAPVKRGSPQDTPG*KSHKQ VLQLGHWMRH
Sbjct: 328 *KLLPSAPVKRGSPQDTPG*KSHKQKVLQLGHWMRH 221
Score = 46.0 bits (94), Expect(3) = 1e-073
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1 / +3
Query: 619 PRFVGARWSPPTAPALS 669
PRFVGARWSPPTAPALS
Sbjct: 567 PRFVGARWSPPTAPALS 617
Score = 40.9 bits (83), Expect(2) = 1e-062
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / -3
Query: 668 DSAGAVGGDQRAPTKRG 618
D AGAVGGDQRAPTKRG
Sbjct: 616 DRAGAVGGDQRAPTKRG 566
Score = 27.2 bits (53), Expect(3) = 1e-073
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / +3
Query: 154 PNLKVGSNDRSTTLKC 201
P L V SN R+TTLKC
Sbjct: 177 PVLAVASNARATTLKC 224
>gb|BG487643.1|BG487643 EM1_65_E08.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 579
Score = 276 bits (597), Expect = 5e-073
Identities = 115/140 (82%), Positives = 119/140 (85%)
Frame = +1 / +1
Query: 637 RWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDDGDTLAH 816
RWSPPTAPALS ELRG FRIVA+VVPITAEDSRIHNYGV EDD D+LAH
Sbjct: 1 RWSPPTAPALSVTRTARVNTVVIELRGVFRIVANVVPITAEDSRIHNYGVTEDDDDSLAH 180
Query: 817 LDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTDCAVARF 996
LDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTS MPVMGGAP+YLSSDLFSTDCAVARF
Sbjct: 181 LDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSKMPVMGGAPNYLSSDLFSTDCAVARF 360
Query: 997 GGRRHQQATAANIAMLTDDD 1056
G RHQ A A NIAM+TDDD
Sbjct: 361 RGGRHQAAPAVNIAMVTDDD 420
Score = 211 bits (455), Expect = 2e-053
Identities = 97/125 (77%), Positives = 101/125 (80%)
Frame = -3 / -2
Query: 1013 WCRRPPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*N 834
W R P RATAQSVEKRSEER* GAPPMTG+L+VTLRLLT*SGR*VWPSTP TSSVRS*N
Sbjct: 377 WWRPPRNRATAQSVEKRSEER*FGAPPMTGILEVTLRLLT*SGR*VWPSTPWTSSVRS*N 198
Query: 833 LKPRSRCARVSPSSSLTP*LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGA 654
LKPRSRCAR+S SSS+TP*LWI ESSAVMGTTLATMRK P TD AGA
Sbjct: 197 LKPRSRCARLSSSSSVTP*LWILESSAVMGTTLATMRKTPLSSMTTVLTRAVRVTDRAGA 18
Query: 653 VGGDQ 639
VGGDQ
Sbjct: 17 VGGDQ 3
Score = 89.0 bits (188), Expect(2) = 5e-022
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = -2 / -1
Query: 1074 CYSFHVVVVGEHGNISGGGLLVSASAEACDGAXXXXXXXXXXVRRASHDGHVGCDVEAVD 895
C VVVG+HGNI+GG LV+++A++CDG V RA+HDGH+G DVEAVD
Sbjct: 438 CVYLFHVVVGDHGNINGGRGLVASAAKSCDGTVGGEEVGGEVVWRAAHDGHLGGDVEAVD 259
Query: 894 VVRAVGLAQ 868
VVRAVGLAQ
Sbjct: 258 VVRAVGLAQ 232
Score = 37.3 bits (75), Expect(2) = 5e-022
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / -1
Query: 756 GGDGHYAGDDAEGAPEL 706
GGDGH GDDAE APEL
Sbjct: 120 GGDGHDVGDDAEDAPEL 70
>gb|CD223966.1|CD223966 CCC1_31_H11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_31_H11_A007 3', mRNA sequence
Length = 588
Score = 276 bits (597), Expect = 5e-073
Identities = 115/141 (81%), Positives = 119/141 (84%)
Frame = +1 / +3
Query: 634 ARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDDGDTLA 813
ARWSPPTAPALS ELRG FRIVA+VVPIT EDSRIHNYGV EDD D+LA
Sbjct: 3 ARWSPPTAPALSVTRTARVNTVVVELRGVFRIVANVVPITTEDSRIHNYGVTEDDDDSLA 182
Query: 814 HLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTDCAVAR 993
HLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTS MPVMGGAP+YLSSDLFSTDCAVAR
Sbjct: 183 HLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSKMPVMGGAPNYLSSDLFSTDCAVAR 362
Query: 994 FGGRRHQQATAANIAMLTDDD 1056
F G RHQ A A NIAM+TDDD
Sbjct: 363 FRGGRHQAAPAVNIAMVTDDD 425
Score = 214 bits (461), Expect = 3e-054
Identities = 98/127 (77%), Positives = 102/127 (80%)
Frame = -3 / -3
Query: 1013 WCRRPPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*N 834
W R P RATAQSVEKRSEER* GAPPMTG+L+VTLRLLT*SGR*VWPSTP TSSVRS*N
Sbjct: 382 WWRPPRNRATAQSVEKRSEER*FGAPPMTGILEVTLRLLT*SGR*VWPSTPWTSSVRS*N 203
Query: 833 LKPRSRCARVSPSSSLTP*LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGA 654
LKPRSRCAR+S SSS+TP*LWI ESS VMGTTLATMRK P TD AGA
Sbjct: 202 LKPRSRCARLSSSSSVTP*LWILESSVVMGTTLATMRKTPLSSTTTVLTRAVRVTDRAGA 23
Query: 653 VGGDQRA 633
VGGDQRA
Sbjct: 22 VGGDQRA 2
Score = 89.0 bits (188), Expect(2) = 5e-022
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = -2 / -2
Query: 1074 CYSFHVVVVGEHGNISGGGLLVSASAEACDGAXXXXXXXXXXVRRASHDGHVGCDVEAVD 895
C VVVG+HGNI+GG LV+++A++CDG V RA+HDGH+G DVEAVD
Sbjct: 443 CVYLFHVVVGDHGNINGGRGLVASAAKSCDGTVGGEEVGGEVVWRAAHDGHLGGDVEAVD 264
Query: 894 VVRAVGLAQ 868
VVRAVGLAQ
Sbjct: 263 VVRAVGLAQ 237
Score = 37.3 bits (75), Expect(2) = 5e-022
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / -2
Query: 756 GGDGHYAGDDAEGAPEL 706
GGDGH GDDAE APEL
Sbjct: 125 GGDGHDVGDDAEDAPEL 75
>gb|BG739375.1|BG739375 EM1_82_B10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 446
Score = 275 bits (596), Expect = 7e-073
Identities = 115/139 (82%), Positives = 118/139 (84%)
Frame = +1 / +3
Query: 619 PRFVGARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
PRFVGARWSPPTAPALS ELRG FRIVA+VVPITAEDSRIHNYGV EDD
Sbjct: 30 PRFVGARWSPPTAPALSVTRTARVNTVVIELRGVFRIVANVVPITAEDSRIHNYGVTEDD 209
Query: 799 GDTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTD 978
D+LAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTS MPVMGGAP+YLSSDLFSTD
Sbjct: 210 DDSLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSKMPVMGGAPNYLSSDLFSTD 389
Query: 979 CAVARFGGRRHQQATAANI 1035
CAVARF G RHQ A A NI
Sbjct: 390 CAVARFRGGRHQAAPAVNI 446
Score = 228 bits (492), Expect = 2e-058
Identities = 104/132 (78%), Positives = 108/132 (81%)
Frame = -3 / -2
Query: 1013 WCRRPPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*N 834
W R P RATAQSVEKRSEER* GAPPMTG+L+VTLRLLT*SGR*VWPSTP TSSVRS*N
Sbjct: 424 WWRPPRNRATAQSVEKRSEER*FGAPPMTGILEVTLRLLT*SGR*VWPSTPWTSSVRS*N 245
Query: 833 LKPRSRCARVSPSSSLTP*LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGA 654
LKPRSRCAR+S SSS+TP*LWI ESSAVMGTTLATMRK P TD AGA
Sbjct: 244 LKPRSRCARLSSSSSVTP*LWILESSAVMGTTLATMRKTPLSSMTTVLTRAVRVTDRAGA 65
Query: 653 VGGDQRAPTKRG 618
VGGDQRAPTKRG
Sbjct: 64 VGGDQRAPTKRG 29
>gb|CX607040.1|CX607040 ANR1_6_H04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_H04_A002 3', mRNA sequence
Length = 740
Score = 242 bits (523), Expect(2) = 5e-072
Identities = 100/115 (86%), Positives = 105/115 (91%)
Frame = +1 / +2
Query: 712 RGAFRIVASVVPITAEDSRIHNYGVREDDGDTLAHLDLGFKFYDLTDDVHGVLGQTYRPD 891
+G RIVA+VVPITAEDSRIHNYGV EDD D+LAHLDLGFKFYDLTDDVHGVLGQTYRPD
Sbjct: 170 QGRLRIVANVVPITAEDSRIHNYGVTEDDDDSLAHLDLGFKFYDLTDDVHGVLGQTYRPD 349
Query: 892 YVNSLNVTSNMPVMGGAPDYLSSDLFSTDCAVARFGGRRHQQATAANIAMLTDDD 1056
YVNSLNVTS MPVMGGAP+YLSSDLFSTDCAVARF G RHQ A A NIAM+TDDD
Sbjct: 350 YVNSLNVTSKMPVMGGAPNYLSSDLFSTDCAVARFRGGRHQAAPAVNIAMVTDDD 514
Score = 192 bits (413), Expect(2) = 8e-054
Identities = 86/100 (86%), Positives = 91/100 (91%)
Frame = -3 / -3
Query: 1013 WCRRPPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*N 834
W R P RATAQSVEKRSEER* GAPPMTG+L+VTLRLLT*SGR*VWPSTP TSSVRS*N
Sbjct: 471 WWRPPRNRATAQSVEKRSEER*FGAPPMTGILEVTLRLLT*SGR*VWPSTPWTSSVRS*N 292
Query: 833 LKPRSRCARVSPSSSLTP*LWIRESSAVMGTTLATMRKAP 714
LKPRSRCAR+S SSS+TP*LWI ESSAVMGTTLATMR+ P
Sbjct: 291 LKPRSRCARLSSSSSVTP*LWILESSAVMGTTLATMRRRP 172
Score = 51.5 bits (106), Expect(2) = 5e-072
Identities = 21/33 (63%), Positives = 21/33 (63%)
Frame = +1 / +3
Query: 619 PRFVGARWSPPTAPALSXXXXXXXXXXXXELRG 717
PRFVGARWSPPTAPALS ELRG
Sbjct: 78 PRFVGARWSPPTAPALSVTRTARVNTVVIELRG 176
Score = 40.9 bits (83), Expect(2) = 8e-054
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / -2
Query: 668 DSAGAVGGDQRAPTKRG 618
D AGAVGGDQRAPTKRG
Sbjct: 127 DRAGAVGGDQRAPTKRG 77
>gb|CW251968.1|CW251968 104_714_11224234_116_35067_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11224234, DNA
sequence
Length = 747
Score = 169 bits (363), Expect(3) = 6e-071
Identities = 63/69 (91%), Positives = 66/69 (95%)
Frame = +1 / +2
Query: 301 LCDFYPGVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFT 480
+CDFYPGVSCGDPRFTG DGNNFYFHGKKD DFCI+SDA LHINAHFIGKRNPAMSRDFT
Sbjct: 122 VCDFYPGVSCGDPRFTGGDGNNFYFHGKKDGDFCILSDANLHINAHFIGKRNPAMSRDFT 301
Query: 481 WIQALGIRF 507
WIQA+GIRF
Sbjct: 302 WIQAVGIRF 328
Score = 149 bits (321), Expect(4) = 1e-058
Identities = 62/68 (91%), Positives = 63/68 (92%)
Frame = -3 / -1
Query: 506 KRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK*KLLPSAPVKRGSPQ 327
KRMP+AWI VKSRLMAGLRLPMKCALMWR ASE MQKS SFLPWK*KLLPS PVKRGSPQ
Sbjct: 327 KRMPTAWIHVKSRLMAGLRLPMKCALMWRLASERMQKSPSFLPWK*KLLPSPPVKRGSPQ 148
Query: 326 DTPG*KSH 303
DTPG*KSH
Sbjct: 147 DTPG*KSH 124
Score = 73.9 bits (155), Expect(3) = 6e-071
Identities = 30/60 (50%), Positives = 35/60 (58%)
Frame = +1 / +2
Query: 619 PRFVGARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
P GA W P P L+ +LRG F IVA+VVPI+ EDSR+HNYGV EDD
Sbjct: 443 PAETGAVWEPAAVPGLTVTRTAAANGVRVQLRGVFDIVANVVPISEEDSRVHNYGVTEDD 622
Score = 66.1 bits (138), Expect(3) = 6e-071
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = +1 / +1
Query: 784 VREDDGDTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPV 930
+R D G L + +DLTDDVHGVLGQTYR DY+N L+V+S MPV
Sbjct: 601 LRRDRGRQPRALRPRVQVFDLTDDVHGVLGQTYRADYINQLSVSSKMPV 747
Score = 58.8 bits (122), Expect(4) = 1e-058
Identities = 28/60 (46%), Positives = 31/60 (51%)
Frame = -3 / -1
Query: 797 SSSLTP*LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGAVGGDQRAPTKRG 618
SSS+TP*LW RESS++MGTTLATM P T S G G AP G
Sbjct: 621 SSSVTP*LWTRESSSLMGTTLATMSNTPLSCTLTPLAAAVRVTVSPGTAAGSHTAPVSAG 442
Score = 51.9 bits (107), Expect(4) = 1e-058
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = -3 / -2
Query: 929 TGMLDVTLRLLT*SGR*VWPSTPCTSSVRS 840
TG+L++TL L *S R*VWP TPCTSSVRS
Sbjct: 746 TGILELTLSWLM*SAR*VWPRTPCTSSVRS 657
Score = 25.4 bits (49), Expect(4) = 1e-058
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -3 / -1
Query: 836 NLKPRSRCARVSPS 795
+L PRS+CAR+S S
Sbjct: 654 DLNPRSKCARLSSS 613
>gb|CD227695.1|CD227695 CCC1_53_E04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_53_E04_A007 3', mRNA sequence
Length = 632
Score = 267 bits (577), Expect = 3e-070
Identities = 112/137 (81%), Positives = 116/137 (84%)
Frame = +1 / +1
Query: 646 PPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDDGDTLAHLDL 825
PPTAPALS ELRG FRIVA+VVPITAEDSRIHNYGV EDD D+LAHLDL
Sbjct: 1 PPTAPALSVTRTARVNTVVVELRGVFRIVANVVPITAEDSRIHNYGVTEDDDDSLAHLDL 180
Query: 826 GFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTDCAVARFGGR 1005
GFKFYDLTDDVHGVLGQTYRPDYVNSLNVTS MPVMGGAP+YLSSDLFSTDCAVARF G
Sbjct: 181 GFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSKMPVMGGAPNYLSSDLFSTDCAVARFRGG 360
Query: 1006 RHQQATAANIAMLTDDD 1056
RHQ A A NIAM+TDDD
Sbjct: 361 RHQAAPAVNIAMVTDDD 411
Score = 202 bits (435), Expect = 1e-050
Identities = 93/122 (76%), Positives = 98/122 (80%)
Frame = -3 / -1
Query: 1013 WCRRPPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*N 834
W R P RATAQSVEKRSEER* GAPP+TG+L+VTLRLLT*SGR*VWPSTP TSSVRS*N
Sbjct: 368 WWRPPRNRATAQSVEKRSEER*FGAPPITGILEVTLRLLT*SGR*VWPSTPWTSSVRS*N 189
Query: 833 LKPRSRCARVSPSSSLTP*LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGA 654
LKPRSRCAR+S SSS+TP*LWI ESSAVMGTTLATMRK P TD AGA
Sbjct: 188 LKPRSRCARLSSSSSVTP*LWILESSAVMGTTLATMRKTPLSSTTTVLTRAVRVTDRAGA 9
Query: 653 VG 648
VG
Sbjct: 8 VG 3
Score = 86.8 bits (183), Expect(2) = 3e-021
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = -2 / -3
Query: 1074 CYSFHVVVVGEHGNISGGGLLVSASAEACDGAXXXXXXXXXXVRRASHDGHVGCDVEAVD 895
C VVVG+HGNI+GG LV+++A++CDG V RA+H+GH+G DVEAVD
Sbjct: 429 CVYLFHVVVGDHGNINGGRGLVASAAKSCDGTVGGEEVGGEVVWRAAHNGHLGGDVEAVD 250
Query: 894 VVRAVGLAQ 868
VVRAVGLAQ
Sbjct: 249 VVRAVGLAQ 223
Score = 37.3 bits (75), Expect(2) = 3e-021
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / -3
Query: 756 GGDGHYAGDDAEGAPEL 706
GGDGH GDDAE APEL
Sbjct: 111 GGDGHDVGDDAEDAPEL 61
>gb|BG487479.1|BG487479 EM1_65_E08.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 485
Score = 258 bits (557), Expect = 2e-067
Identities = 97/108 (89%), Positives = 100/108 (92%)
Frame = +1 / +1
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCG
Sbjct: 160 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCG 339
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDF 477
DPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPAMSRDF
Sbjct: 340 DPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPAMSRDF 483
Score = 166 bits (356), Expect(2) = 2e-041
Identities = 68/72 (94%), Positives = 69/72 (95%)
Frame = -3 / -1
Query: 479 VKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK*KLLPSAPVKRGSPQDTPG*KSHK 300
VKSRLMAGLRLPMKCALMWR+ASETMQKS S LPWK*KLLPSAPVKRGSPQDTPG*KSHK
Sbjct: 485 VKSRLMAGLRLPMKCALMWRSASETMQKSLSLLPWK*KLLPSAPVKRGSPQDTPG*KSHK 306
Query: 299 QNVLQLGHWMRH 264
Q VLQLGHWMRH
Sbjct: 305 QKVLQLGHWMRH 270
Score = 95.9 bits (203), Expect(2) = 7e-022
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = +3 / +3
Query: 171 LQRSQHDSQVHQHQEQQDHLQRHLQRTLPSQVPHPVPKLQDIXXXXXXXXXXXXXPTLH 347
LQR+ H SQVHQHQEQQDHLQRHLQ+ +PSQVPHPVP+LQD PTLH
Sbjct: 177 LQRASHHSQVHQHQEQQDHLQRHLQQAMPSQVPHPVPQLQDFLLVRLLPRRVLRRPTLH 353
Score = 29.9 bits (59), Expect(2) = 7e-022
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / +3
Query: 450 AQPGHEPRLH 479
AQPGHEPRLH
Sbjct: 456 AQPGHEPRLH 485
Score = 25.4 bits (49), Expect(2) = 2e-041
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -2
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 286 GTG*GTCEG 260
>gb|CD219479.1|CD219479 CCC1_57_E11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_57_E11_A007 3', mRNA sequence
Length = 626
Score = 256 bits (554), Expect = 4e-067
Identities = 108/133 (81%), Positives = 112/133 (84%)
Frame = +1 / +2
Query: 658 PALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDDGDTLAHLDLGFKF 837
PALS ELRG FRIVA+VVPITAEDSRIHNYGV EDD D+LAHLDLGFKF
Sbjct: 2 PALSVTRTARVNTVVVELRGVFRIVANVVPITAEDSRIHNYGVTEDDDDSLAHLDLGFKF 181
Query: 838 YDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTDCAVARFGGRRHQQ 1017
YDLTDDVHGVLGQTYRPDYVNSLNVTS MPVMGGAP+YLSSDLFSTDCAVARF G RHQ
Sbjct: 182 YDLTDDVHGVLGQTYRPDYVNSLNVTSKMPVMGGAPNYLSSDLFSTDCAVARFRGGRHQA 361
Query: 1018 ATAANIAMLTDDD 1056
A A NIAM+TDDD
Sbjct: 362 APAVNIAMVTDDD 400
Score = 197 bits (425), Expect = 3e-049
Identities = 91/119 (76%), Positives = 95/119 (79%)
Frame = -3 / -3
Query: 1013 WCRRPPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*N 834
W R P RATAQSVEKRSEER* GAPPMTG+L+VTLRLLT*SGR*VWPSTP TSSVRS*N
Sbjct: 357 WWRPPRNRATAQSVEKRSEER*FGAPPMTGILEVTLRLLT*SGR*VWPSTPWTSSVRS*N 178
Query: 833 LKPRSRCARVSPSSSLTP*LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAG 657
LKPRSRCAR+S SSS+TP*LWI ESSAVMGTTLATMRK P TD AG
Sbjct: 177 LKPRSRCARLSSSSSVTP*LWILESSAVMGTTLATMRKTPLSSTTTVLTRAVRVTDRAG 1
Score = 89.0 bits (188), Expect(2) = 5e-022
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = -2 / -2
Query: 1074 CYSFHVVVVGEHGNISGGGLLVSASAEACDGAXXXXXXXXXXVRRASHDGHVGCDVEAVD 895
C VVVG+HGNI+GG LV+++A++CDG V RA+HDGH+G DVEAVD
Sbjct: 418 CVYLFHVVVGDHGNINGGRGLVASAAKSCDGTVGGEEVGGEVVWRAAHDGHLGGDVEAVD 239
Query: 894 VVRAVGLAQ 868
VVRAVGLAQ
Sbjct: 238 VVRAVGLAQ 212
Score = 37.3 bits (75), Expect(2) = 5e-022
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / -2
Query: 756 GGDGHYAGDDAEGAPEL 706
GGDGH GDDAE APEL
Sbjct: 100 GGDGHDVGDDAEDAPEL 50
>gb|CL189546.1|CL189546 104_406_10902373_114_32469_049 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10902373, DNA
sequence
Length = 674
Score = 145 bits (311), Expect(3) = 6e-066
Identities = 55/71 (77%), Positives = 65/71 (91%)
Frame = +1 / -1
Query: 796 DGDTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFST 975
+ D+LAH DLGFKF+DLTDDVHGVLGQTYR DY+N L+V+S MPVMGGAP+Y+SSD+F+T
Sbjct: 296 EDDSLAHFDLGFKFFDLTDDVHGVLGQTYRADYINQLSVSSKMPVMGGAPNYVSSDIFAT 117
Query: 976 DCAVARFGGRR 1008
DCAVARFG RR
Sbjct: 116 DCAVARFGARR 84
Score = 113 bits (241), Expect(3) = 4e-051
Identities = 51/71 (71%), Positives = 56/71 (78%)
Frame = -3 / +1
Query: 1007 RRPPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*NLK 828
RR P ATAQSV K SEE * GAPPMTG+L++TL L *S R*VWP TPCTSSVRS NL
Sbjct: 85 RRAPNLATAQSVAKMSEET*FGAPPMTGILELTLSWLM*SAR*VWPRTPCTSSVRSKNLN 264
Query: 827 PRSRCARVSPS 795
PRS+CAR+S S
Sbjct: 265 PRSKCARLSSS 297
Score = 73.9 bits (155), Expect(3) = 6e-066
Identities = 30/60 (50%), Positives = 35/60 (58%)
Frame = +1 / -1
Query: 619 PRFVGARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
P GA W P P L+ +LRG F IVA+VVPI+ EDSR+HNYGV EDD
Sbjct: 467 PAETGAVWEPAAVPGLTVTRTAAANGVRVQLRGVFDIVANVVPISEEDSRVHNYGVTEDD 288
Score = 73.0 bits (153), Expect(3) = 6e-066
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +1 / -1
Query: 415 AALHINAHFIGKRNPAMSRDFTWIQALGIRF 507
A LHINAHF+GKRNPAMSRDFTWIQA+GIRF
Sbjct: 674 ANLHINAHFMGKRNPAMSRDFTWIQAVGIRF 582
Score = 70.3 bits (147), Expect(3) = 4e-051
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = -3 / +1
Query: 506 KRMPSAWIQVKSRLMAGLRLPMKCALMWR 420
KRMP+AWI VKSRLMAGLRLPMKCALMWR
Sbjct: 583 KRMPTAWIHVKSRLMAGLRLPMKCALMWR 669
Score = 58.8 bits (122), Expect(3) = 4e-051
Identities = 28/60 (46%), Positives = 31/60 (51%)
Frame = -3 / +1
Query: 797 SSSLTP*LWIRESSAVMGTTLATMRKAPXXXXXXXXXXXXXXTDSAGAVGGDQRAPTKRG 618
SSS+TP*LW RESS++MGTTLATM P T S G G AP G
Sbjct: 289 SSSVTP*LWTRESSSLMGTTLATMSNTPLSCTLTPLAAAVRVTVSPGTAAGSHTAPVSAG 468
>gb|CD228642.1|CD228642 CCC1_8_A01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_8_A01_A007 5', mRNA sequence
Length = 490
Score = 246 bits (531), Expect = 6e-064
Identities = 92/103 (89%), Positives = 95/103 (92%)
Frame = +1 / +3
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCG
Sbjct: 180 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCG 359
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPA 462
DPRFTGADGNNFYFHG KD+DFCIVSDA LHINAHFIGKRNPA
Sbjct: 360 DPRFTGADGNNFYFHGNKDKDFCIVSDADLHINAHFIGKRNPA 488
Score = 155 bits (334), Expect(2) = 2e-038
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = -3 / -1
Query: 464 MAGLRLPMKCALMWRAASETMQKSRSFLPWK*KLLPSAPVKRGSPQDTPG*KSHKQNVLQ 285
MAGLRLPMKCALMWR+ASETMQKS S LPWK*KLLPSAPVKRGSPQDTPG*KSHKQ VLQ
Sbjct: 490 MAGLRLPMKCALMWRSASETMQKSLSLLPWK*KLLPSAPVKRGSPQDTPG*KSHKQKVLQ 311
Query: 284 LGHWMRH 264
LGHWMRH
Sbjct: 310 LGHWMRH 290
Score = 25.4 bits (49), Expect(2) = 2e-038
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -2
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 306 GTG*GTCEG 280
>gb|CW257668.1|CW257668 104_723_11227460_148_35155_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227460, DNA
sequence
Length = 565
Score = 125 bits (267), Expect(5) = 4e-061
Identities = 45/54 (83%), Positives = 49/54 (90%)
Frame = +1 / +2
Query: 301 LCDFYPGVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPA 462
+CDFYPGVSCGDPR+TGADGN FYFHGKKD+DFCIV+DA LHINAHFIG N A
Sbjct: 11 VCDFYPGVSCGDPRYTGADGNTFYFHGKKDQDFCIVTDAGLHINAHFIGNHNRA 172
Score = 105 bits (224), Expect(4) = 6e-042
Identities = 45/53 (84%), Positives = 46/53 (86%)
Frame = -3 / -2
Query: 461 AGLRLPMKCALMWRAASETMQKSRSFLPWK*KLLPSAPVKRGSPQDTPG*KSH 303
A L LPMKCALMWR AS TMQKS SFLPWK*K+LPSAPV RGSP DTPG*KSH
Sbjct: 171 ARLWLPMKCALMWRPASVTMQKSWSFLPWK*KVLPSAPVYRGSPHDTPG*KSH 13
Score = 55.6 bits (115), Expect(5) = 4e-061
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +1 / +3
Query: 457 PAMSRDFTWIQALGIRFAHHHLYVAA 534
PA +RDFTWIQALGI FAHH LYV A
Sbjct: 171 PATNRDFTWIQALGIHFAHHSLYVGA 248
Score = 51.5 bits (106), Expect(4) = 6e-042
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -3 / -1
Query: 533 AAT*RWWCAKRMPSAWIQVKSRLMAG 456
A T*R WCAK MPSAWI VKSRL+AG
Sbjct: 247 APT*RLWCAKWMPSAWIHVKSRLVAG 170
Score = 46.0 bits (94), Expect(5) = 4e-061
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +1 / +3
Query: 724 RIVASVVPITAEDSRIHNYGVREDD 798
R V VVPITAEDSR+H YGV EDD
Sbjct: 423 RGVFRVVPITAEDSRVHGYGVTEDD 497
Score = 46.0 bits (94), Expect(5) = 4e-061
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = +1 / +3
Query: 628 VGARWSPPTAPALSXXXXXXXXXXXXELRGAFRIV 732
VGA WSPP APALS ELRG FR+V
Sbjct: 339 VGAVWSPPAAPALSVTRTARANAVVVELRGVFRVV 443
Score = 39.6 bits (80), Expect(5) = 4e-061
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +1 / +3
Query: 793 DDGDTLAHLDLGFKFYDLTD 852
+D LAHLDLGFKFYDLT+
Sbjct: 489 EDDCRLAHLDLGFKFYDLTE 548
Score = 36.8 bits (74), Expect(4) = 6e-042
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -3 / -1
Query: 737 LATMRKAPXXXXXXXXXXXXXXTDSAGAVGGDQRAPT 627
+ T RK P TDSAGA GGD APT
Sbjct: 448 MGTTRKTPRSSTTTALARAVRVTDSAGAAGGDHTAPT 338
Score = 35.4 bits (71), Expect(4) = 6e-042
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -3 / -1
Query: 851 SVRS*NLKPRSRCARVSPSS 792
SVRS*NL PRSRCAR SS
Sbjct: 547 SVRS*NLNPRSRCARRQSSS 488
>gb|CD226775.1|CD226775 CCC1_48_H08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_48_H08_A007 3', mRNA sequence
Length = 552
Score = 233 bits (503), Expect = 5e-060
Identities = 96/108 (88%), Positives = 99/108 (91%)
Frame = +1 / +3
Query: 733 ASVVPITAEDSRIHNYGVREDDGDTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNV 912
A VVPITAEDSRIHNYGV EDD D+LAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNV
Sbjct: 3 AKVVPITAEDSRIHNYGVTEDDDDSLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNV 182
Query: 913 TSNMPVMGGAPDYLSSDLFSTDCAVARFGGRRHQQATAANIAMLTDDD 1056
TS MPVMGGAP+YLSSDLFSTDCAVARF G RHQ A A NIAM+TDDD
Sbjct: 183 TSKMPVMGGAPNYLSSDLFSTDCAVARFRGGRHQAAPAVNIAMVTDDD 326
Score = 181 bits (390), Expect = 2e-044
Identities = 82/94 (87%), Positives = 86/94 (91%)
Frame = -3 / -3
Query: 1013 WCRRPPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*N 834
W R P RATAQSVEKRSEER* GAPPMTG+L+VTLRLLT*SGR*VWPSTP TSSVRS*N
Sbjct: 283 WWRPPRNRATAQSVEKRSEER*FGAPPMTGILEVTLRLLT*SGR*VWPSTPWTSSVRS*N 104
Query: 833 LKPRSRCARVSPSSSLTP*LWIRESSAVMGTTLA 732
LKPRSRCAR+S SSS+TP*LWI ESSAVMGTTLA
Sbjct: 103 LKPRSRCARLSSSSSVTP*LWILESSAVMGTTLA 2
>gb|CD224897.1|CD224897 CCC1_37_F06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_37_F06_A007 3', mRNA sequence
Length = 493
Score = 232 bits (500), Expect = 1e-059
Identities = 95/108 (87%), Positives = 99/108 (91%)
Frame = +1 / +3
Query: 733 ASVVPITAEDSRIHNYGVREDDGDTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNV 912
A+VVPIT EDSRIHNYGV EDD D+LAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNV
Sbjct: 3 ANVVPITTEDSRIHNYGVTEDDDDSLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNV 182
Query: 913 TSNMPVMGGAPDYLSSDLFSTDCAVARFGGRRHQQATAANIAMLTDDD 1056
TS MPVMGGAP+YLSSDLFSTDCAVARF G RHQ A A NIAM+TDDD
Sbjct: 183 TSKMPVMGGAPNYLSSDLFSTDCAVARFRGGRHQAAPAVNIAMVTDDD 326
Score = 179 bits (386), Expect = 6e-044
Identities = 81/94 (86%), Positives = 85/94 (90%)
Frame = -3 / -1
Query: 1013 WCRRPPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*N 834
W R P RATAQSVEKRSEER* GAPPMTG+L+VTLRLLT*SGR*VWPSTP TSSVRS*N
Sbjct: 283 WWRPPRNRATAQSVEKRSEER*FGAPPMTGILEVTLRLLT*SGR*VWPSTPWTSSVRS*N 104
Query: 833 LKPRSRCARVSPSSSLTP*LWIRESSAVMGTTLA 732
LKPRSRCAR+S SSS+TP*LWI ESS VMGTTLA
Sbjct: 103 LKPRSRCARLSSSSSVTP*LWILESSVVMGTTLA 2
>gb|CF428909.1|CF428909 PH1_18_E02.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_18_E02_A002 5', mRNA sequence
Length = 643
Score = 226 bits (488), Expect = 5e-058
Identities = 82/113 (72%), Positives = 92/113 (81%)
Frame = +1 / +3
Query: 169 GSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCGDPRFT 348
G R C N K+ + C A C+ RCP++C++ CP CKTFC+CDFYPGVSCGDPRFT
Sbjct: 213 GKYKRDQQTACDNPKNKQQKCIAKCDKRCPNQCIVLCPGCKTFCMCDFYPGVSCGDPRFT 392
Query: 349 GADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRF 507
G DGNNFYFHGKKD DFCI+SDA LHINAHFIGKRNPAMSRDFTWIQA+GIRF
Sbjct: 393 GGDGNNFYFHGKKDGDFCILSDANLHINAHFIGKRNPAMSRDFTWIQAVGIRF 551
Score = 160 bits (345), Expect = 3e-038
Identities = 68/81 (83%), Positives = 69/81 (85%)
Frame = -3 / -1
Query: 506 KRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK*KLLPSAPVKRGSPQ 327
KRMP+AWI VKSRLMAGLRLPMKCALMWR ASE MQKS SFLPWK*KLLPS PVKRGSPQ
Sbjct: 550 KRMPTAWIHVKSRLMAGLRLPMKCALMWRLASERMQKSPSFLPWK*KLLPSPPVKRGSPQ 371
Query: 326 DTPG*KSHKQNVLQLGHWMRH 264
DTPG*KSH QNVL G H
Sbjct: 370 DTPG*KSHMQNVLHPGQRTMH 308
>gb|CF430946.1|CF430946 NIT1_1_H06.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_1_H06_A002 5', mRNA sequence
Length = 443
Score = 221 bits (476), Expect = 2e-056
Identities = 82/93 (88%), Positives = 85/93 (91%)
Frame = +1 / +2
Query: 154 PNLKVGSNDRSTTLKCTNIKSNKTTCSATCNARCPHKCLIQCPSCKTFCLCDFYPGVSCG 333
P L V SN R+TTLKCTN K+NKTTCSATCN RCPHKCLIQCPSCKTFCLCDFYPGVSCG
Sbjct: 164 PVLAVASNARATTLKCTNTKNNKTTCSATCNKRCPHKCLIQCPSCKTFCLCDFYPGVSCG 343
Query: 334 DPRFTGADGNNFYFHGKKDRDFCIVSDAALHIN 432
DPRFTGADGNNFYFHG KD+DFCIVSDA LHIN
Sbjct: 344 DPRFTGADGNNFYFHGNKDKDFCIVSDADLHIN 442
Score = 129 bits (276), Expect(2) = 2e-030
Identities = 52/56 (92%), Positives = 53/56 (94%)
Frame = -3 / -3
Query: 431 LMWRAASETMQKSRSFLPWK*KLLPSAPVKRGSPQDTPG*KSHKQNVLQLGHWMRH 264
LMWR+ASETMQKS S LPWK*KLLPSAPVKRGSPQDTPG*KSHKQ VLQLGHWMRH
Sbjct: 441 LMWRSASETMQKSLSLLPWK*KLLPSAPVKRGSPQDTPG*KSHKQKVLQLGHWMRH 274
Score = 25.4 bits (49), Expect(2) = 2e-030
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 280 GTG*GTCEG 254
GTG*GTCEG
Sbjct: 290 GTG*GTCEG 264
>gb|CL150226.1|CL150226 104_331_10778370_114_31355_306 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10778370, DNA
sequence
Length = 536
Score = 122 bits (261), Expect(4) = 6e-054
Identities = 44/54 (81%), Positives = 48/54 (88%)
Frame = +1 / +2
Query: 301 LCDFYPGVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPA 462
+CDFYPGVSCGDPR+TGADGN FYFHGK D+DFCIV+DA LHINAHFIG N A
Sbjct: 35 VCDFYPGVSCGDPRYTGADGNTFYFHGKMDQDFCIVTDAGLHINAHFIGNHNRA 196
Score = 102 bits (218), Expect(3) = 7e-036
Identities = 44/53 (83%), Positives = 45/53 (84%)
Frame = -3 / -3
Query: 461 AGLRLPMKCALMWRAASETMQKSRSFLPWK*KLLPSAPVKRGSPQDTPG*KSH 303
A L LPMKCALMWR AS TMQKS S LPWK*K+LPSAPV RGSP DTPG*KSH
Sbjct: 195 ARLWLPMKCALMWRPASVTMQKSWSILPWK*KVLPSAPVYRGSPHDTPG*KSH 37
Score = 55.6 bits (115), Expect(4) = 6e-054
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +1 / +3
Query: 457 PAMSRDFTWIQALGIRFAHHHLYVAA 534
PA +RDFTWIQALGI FAHH LYV A
Sbjct: 195 PATNRDFTWIQALGIHFAHHSLYVGA 272
Score = 51.5 bits (106), Expect(3) = 7e-036
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -3 / -2
Query: 533 AAT*RWWCAKRMPSAWIQVKSRLMAG 456
A T*R WCAK MPSAWI VKSRL+AG
Sbjct: 271 APT*RLWCAKWMPSAWIHVKSRLVAG 194
Score = 46.0 bits (94), Expect(4) = 6e-054
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +1 / +3
Query: 724 RIVASVVPITAEDSRIHNYGVREDD 798
R V VVPITAEDSR+H YGV EDD
Sbjct: 447 RGVFRVVPITAEDSRVHGYGVTEDD 521
Score = 46.0 bits (94), Expect(4) = 6e-054
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = +1 / +3
Query: 628 VGARWSPPTAPALSXXXXXXXXXXXXELRGAFRIV 732
VGA WSPP APALS ELRG FR+V
Sbjct: 363 VGAVWSPPAAPALSVTRTARANAVVVELRGVFRVV 467
Score = 36.8 bits (74), Expect(3) = 7e-036
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -3 / -2
Query: 737 LATMRKAPXXXXXXXXXXXXXXTDSAGAVGGDQRAPT 627
+ T RK P TDSAGA GGD APT
Sbjct: 472 MGTTRKTPRSSTTTALARAVRVTDSAGAAGGDHTAPT 362
>gb|BZ348485.1|BZ348485 hp58c02.g2 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hp58c02 5', DNA sequence
Length = 568
Score = 99.6 bits (211), Expect(5) = 2e-053
Identities = 40/48 (83%), Positives = 42/48 (87%)
Frame = +1 / +3
Query: 793 DDGDTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMG 936
+D LAHLDLGFKFYDLTDDVHGVLGQTYR DYVN LNVT+ MPVMG
Sbjct: 387 EDDWRLAHLDLGFKFYDLTDDVHGVLGQTYRTDYVNRLNVTAKMPVMG 530
Score = 80.3 bits (169), Expect(4) = 1e-036
Identities = 41/60 (68%), Positives = 43/60 (71%)
Frame = -3 / -1
Query: 971 EKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*NLKPRSRCARVSPSS 792
E R E + PMTG+L VTL LLT*S R*V PSTP TSSVRS*NL PRSRCAR SS
Sbjct: 565 ESRGTEGVGASHPMTGILAVTLSLLT*SVR*VCPSTPWTSSVRS*NLNPRSRCARRQSSS 386
Score = 55.6 bits (115), Expect(5) = 2e-053
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +1 / +3
Query: 457 PAMSRDFTWIQALGIRFAHHHLYVAA 534
PA +RDFTWIQALGI FAHH LYV A
Sbjct: 69 PATNRDFTWIQALGIHFAHHSLYVGA 146
Score = 51.5 bits (106), Expect(4) = 1e-036
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -3 / -1
Query: 533 AAT*RWWCAKRMPSAWIQVKSRLMAG 456
A T*R WCAK MPSAWI VKSRL+AG
Sbjct: 145 APT*RLWCAKWMPSAWIHVKSRLVAG 68
Score = 47.3 bits (97), Expect(5) = 2e-053
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1 / +2
Query: 394 DFCIVSDAALHINAHFIGKRNPA 462
DFC+V+DA LHINAHFIG N A
Sbjct: 2 DFCVVTDAGLHINAHFIGNHNRA 70
Score = 43.7 bits (89), Expect(5) = 2e-053
Identities = 20/36 (55%), Positives = 20/36 (55%)
Frame = +1 / +3
Query: 628 VGARWSPPTAPALSXXXXXXXXXXXXELRGAFRIVA 735
VGA WSPP APALS ELRG FR VA
Sbjct: 237 VGAVWSPPGAPALSVTRTARANAVVVELRGVFRGVA 344
Score = 41.8 bits (85), Expect(4) = 1e-036
Identities = 18/23 (78%), Positives = 18/23 (78%)
Frame = -3 / -2
Query: 461 AGLRLPMKCALMWRAASETMQKS 393
A L LPMKCALMWR AS T QKS
Sbjct: 69 ARLWLPMKCALMWRPASVTTQKS 1
Score = 39.6 bits (80), Expect(5) = 2e-053
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +1 / +3
Query: 742 VPITAEDSRIHNYGVREDD 798
V ITAEDSR+H YGV EDD
Sbjct: 339 VAITAEDSRVHGYGVTEDD 395
Score = 37.3 bits (75), Expect(4) = 1e-036
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -3 / -1
Query: 737 LATMRKAPXXXXXXXXXXXXXXTDSAGAVGGDQRAPT 627
+AT RK P TDSAGA GGD APT
Sbjct: 346 MATPRKTPRSSTTTALARAVRVTDSAGAPGGDHTAPT 236
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 875,947,041
Number of Sequences: 832831
Number of extensions: 9876074
Number of successful extensions: 69573
Number of sequences better than 1.0e-020: 124
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 41529259552
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)