TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 9009927.2.1
(404 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW314050.1|CW314050 104_804_11471615_148_35798_088 Sorgh... 137 2e-062
gb|CW041655.1|CW041655 104_275_10506672_114_30284 Sorghum m... 71 6e-037
gb|CW491015.1|CW491015 fsbb001f280l06f0 Sorghum methylation... 103 5e-036
gb|CW354820.1|CW354820 fsbb001f019d03k0 Sorghum methylation... 86 6e-036
gb|CX611399.1|CX611399 ANR1_24_A06.g1_A002 Anaerobic roots ... 84 6e-034
gb|CW258064.1|CW258064 104_723_11227672_116_35161_052 Sorgh... 77 1e-033
gb|CW026709.1|CW026709 104_252_10498105_116_30520 Sorghum m... 77 1e-033
gb|CN148942.1|CN148942 WOUND1_59_F10.g1_A002 Wounded leaves... 86 2e-033
gb|CD209759.1|CD209759 HS1_54_C12.g1_A012 Heat-shocked seed... 86 2e-033
gb|CN138063.1|CN138063 OX1_61_A11.g1_A002 Oxidatively-stres... 84 6e-033
gb|CD210313.1|CD210313 HS1_50_F06.g1_A012 Heat-shocked seed... 84 6e-033
gb|CD428126.1|CD428126 ETH1_32_E12.g1_A002 Ethylene-treated... 84 6e-033
gb|CW052419.1|CW052419 104_292_10515541_114_30188 Sorghum m... 75 1e-032
gb|CW052420.1|CW052420 104_292_10515541_114_30286 Sorghum m... 75 1e-032
gb|CD212966.1|CD212966 HS1_17_F02.g1_A012 Heat-shocked seed... 84 1e-032
gb|AF474125.1| Sorghum bicolor typical A-type R2R3 Myb prot... 84 3e-032
gb|CX611811.1|CX611811 ANR1_26_H01.g1_A002 Anaerobic roots ... 81 3e-032
gb|CW219513.1|CW219513 104_653_11196814_116_37144_085 Sorgh... 75 4e-032
gb|CN138550.1|CN138550 OX1_64_A08.g1_A002 Oxidatively-stres... 79 4e-032
gb|CW115795.1|CW115795 104_491_11106754_148_34597_045 Sorgh... 73 4e-032
gb|CD429271.1|CD429271 ETH1_3_B10.g1_A002 Ethylene-treated ... 84 7e-032
gb|BE361115.1|BE361115 DG1_70_A01.b1_A002 Dark Grown 1 (DG1... 84 1e-031
gb|CW090149.1|CW090149 104_435_10949116_116_32599_002 Sorgh... 72 1e-031
gb|BE356993.1|BE356993 DG1_146_C10.b1_A002 Dark Grown 1 (DG... 80 2e-030
gb|BE357013.1|BE357013 DG1_146_C11.b1_A002 Dark Grown 1 (DG... 80 2e-030
gb|CN149909.1|CN149909 WOUND1_65_D11.g1_A002 Wounded leaves... 80 3e-030
gb|CF429105.1|CF429105 PH1_19_F05.g1_A002 Phosphorous-defic... 80 3e-030
gb|CD214131.1|CD214131 HS1_70_D11.g1_A012 Heat-shocked seed... 80 3e-030
gb|CX610466.1|CX610466 ANR1_18_H10.g1_A002 Anaerobic roots ... 78 4e-030
gb|CW491260.1|CW491260 fsbb001f281a22f0 Sorghum methylation... 86 5e-030
gb|CW414653.1|CW414653 fsbb001f114g17f0 Sorghum methylation... 86 6e-030
gb|CW163341.1|CW163341 104_571_11151411_116_36453_016 Sorgh... 86 7e-030
gb|AW563849.1|AW563849 LG1_272_G12.b1_A002 Light Grown 1 (L... 80 1e-029
gb|CN149937.1|CN149937 WOUND1_65_G12.g1_A002 Wounded leaves... 79 1e-029
gb|CD224966.1|CD224966 CCC1_37_B09.g1_A007 Callus culture/c... 80 2e-029
gb|AW563989.1|AW563989 LG1_281_D10.b1_A002 Light Grown 1 (L... 79 2e-029
gb|CL180232.1|CL180232 104_389_10895849_116_31908_377 Sorgh... 84 6e-029
gb|CD429496.1|CD429496 ETH1_4_D02.g1_A002 Ethylene-treated ... 80 9e-029
gb|CW057886.1|CW057886 104_300_10518454_1_30040 Sorghum met... 84 1e-028
gb|BF655998.1|BF655998 FM1_42_F08.b1_A003 Floral-Induced Me... 73 2e-028
gb|CX608115.1|CX608115 ANR1_32_F03.g1_A002 Anaerobic roots ... 77 2e-028
gb|CX616786.1|CX616786 GABR1_29_H12.g1_A002 GA- or brassino... 75 2e-028
gb|CD235285.1|CD235285 SS1_28_H11.g1_A012 Salt-stressed see... 75 2e-028
gb|CN139844.1|CN139844 OX1_24_B03.g1_A002 Oxidatively-stres... 73 2e-028
gb|AW672062.1|AW672062 LG1_354_G05.b1_A002 Light Grown 1 (L... 73 2e-028
gb|CX608930.1|CX608930 ANR1_9_D06.g1_A002 Anaerobic roots S... 72 6e-028
gb|CD226268.1|CD226268 CCC1_44_D06.g1_A007 Callus culture/c... 72 6e-028
gb|CW258813.1|CW258813 104_724_11228081_116_35162_065 Sorgh... 83 1e-027
gb|CW340501.1|CW340501 104_841_11485831_148_36147_022 Sorgh... 83 2e-027
gb|CW077690.1|CW077690 104_384_10893622_116_31916_070 Sorgh... 83 2e-027
gb|CW269199.1|CW269199 104_740_11401724_116_36231_076 Sorgh... 83 8e-027
gb|CW041910.1|CW041910 104_275_10506824_115_30285 Sorghum m... 83 8e-027
gb|CW215467.1|CW215467 104_647_11194554_116_37464_067 Sorgh... 83 8e-027
gb|CW257497.1|CW257497 104_723_11227368_116_35159_096 Sorgh... 84 9e-027
gb|CW136797.1|CW136797 104_521_11118569_148_34842_065 Sorgh... 80 1e-026
gb|CW283724.1|CW283724 104_760_11409398_116_35484_059 Sorgh... 75 1e-026
gb|BG947473.1|BG947473 IP1_4_H01.b1_A002 Immature pannicle ... 68 1e-026
gb|AF474133.1| Sorghum bicolor typical P-type R2R3 Myb prot... 80 1e-026
gb|AF474131.1| Sorghum bicolor typical P-type R2R3 Myb prot... 80 1e-026
gb|AF474130.1| Sorghum bicolor typical P-type R2R3 Myb prot... 80 1e-026
gb|CW396674.1|CW396674 fsbb001f085d16f0 Sorghum methylation... 80 1e-026
gb|CW317106.1|CW317106 104_808_11473239_116_35853_052 Sorgh... 80 1e-026
gb|CW283725.1|CW283725 104_760_11409398_148_35488_059 Sorgh... 75 1e-026
gb|CW037176.1|CW037176 104_268_10504189_115_30382 Sorghum m... 77 2e-026
gb|CD210026.1|CD210026 HS1_56_E12.g1_A012 Heat-shocked seed... 87 2e-026
gb|BG560270.1|BG560270 RHIZ2_72_B10.b1_A003 Rhizome2 (RHIZ2... 72 2e-026
gb|AW564773.1|AW564773 LG1_301_A07.b1_A002 Light Grown 1 (L... 69 9e-026
gb|CW331265.1|CW331265 104_828_11480814_148_36025_023 Sorgh... 73 1e-025
gb|CW323228.1|CW323228 104_817_11476519_148_35956_026 Sorgh... 73 1e-025
gb|CW419529.1|CW419529 fsbb001f124g17k0 Sorghum methylation... 79 2e-025
gb|CW168642.1|CW168642 104_578_11154251_148_36600_042 Sorgh... 71 3e-025
gb|CD428558.1|CD428558 ETH1_27_H11.g1_A002 Ethylene-treated... 70 5e-025
gb|CW496466.1|CW496466 fsbb001f288l19f0 Sorghum methylation... 71 7e-025
gb|AF474126.1| Sorghum bicolor typical P-type R2R3 Myb prot... 75 9e-025
gb|CX617423.1|CX617423 GABR1_33_D11.g1_A002 GA- or brassino... 69 9e-025
gb|CW212940.1|CW212940 104_644_11191287_116_37030_060 Sorgh... 75 9e-025
gb|CD232318.1|CD232318 SS1_39_E09.g1_A012 Salt-stressed see... 72 1e-024
gb|CX611279.1|CX611279 ANR1_23_E12.g1_A002 Anaerobic roots ... 71 4e-024
gb|CW331264.1|CW331264 104_828_11480814_116_36026_023 Sorgh... 73 6e-024
gb|AF470060.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 84 6e-024
gb|CW172247.1|CW172247 104_583_11156182_148_36535_089 Sorgh... 66 2e-023
gb|CX613908.1|CX613908 GABR1_10_H03.g1_A002 GA- or brassino... 73 2e-023
gb|CX615050.1|CX615050 GABR1_17_G10.g1_A002 GA- or brassino... 73 2e-023
gb|CW374733.1|CW374733 fsbb001f051l23f0 Sorghum methylation... 66 3e-023
gb|CW347756.1|CW347756 fsbb001f007m23f0 Sorghum methylation... 71 4e-023
gb|CW457158.1|CW457158 fsbb001f202n15f0 Sorghum methylation... 71 4e-023
gb|AF474129.1| Sorghum bicolor typical P-type R2R3 Myb prot... 66 6e-023
gb|CW028250.1|CW028250 104_255_10498984_114_30394 Sorghum m... 64 1e-022
gb|CW034132.1|CW034132 104_264_10502369_115_30380 Sorghum m... 68 1e-022
gb|CW440966.1|CW440966 fsbb001f159n24k0 Sorghum methylation... 68 1e-022
gb|AF470058.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 62 2e-022
gb|AF470061.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 71 2e-022
gb|CX622870.1|CX622870 GABR1_66_A07.g1_A002 GA- or brassino... 73 2e-022
gb|BZ424048.1|BZ424048 id56d03.g1 WGS-SbicolorF (DH5a methy... 64 2e-022
gb|CW298181.1|CW298181 104_780_11462443_148_35652_070 Sorgh... 59 2e-022
gb|CW037895.1|CW037895 104_269_10504606_114_30383 Sorghum m... 70 5e-022
gb|BZ330053.1|BZ330053 hv89f07.g1 WGS-SbicolorF (JM107 adap... 63 5e-022
gb|CW480519.1|CW480519 fsbb001f239k04f0 Sorghum methylation... 58 5e-022
gb|AF474132.1| Sorghum bicolor typical P-type R2R3 Myb prot... 64 8e-022
gb|CW032214.1|CW032214 104_261_10501251_114_30363 Sorghum m... 66 8e-022
gb|CN140754.1|CN140754 OX1_46_F09.g1_A002 Oxidatively-stres... 66 1e-021
gb|CW493828.1|CW493828 fsbb001f284m17k0 Sorghum methylation... 60 1e-021
gb|CW283140.1|CW283140 104_759_11409088_148_35474_056 Sorgh... 68 1e-021
gb|CW487349.1|CW487349 fsbb001f253c15k0 Sorghum methylation... 58 1e-021
gb|CW300014.1|CW300014 104_783_11463423_148_36246_060 Sorgh... 58 2e-021
gb|CW189094.1|CW189094 104_610_11173783_148_37098_028 Sorgh... 66 2e-021
gb|CD232590.1|CD232590 SS1_46_D12.g1_A012 Salt-stressed see... 71 2e-021
gb|CW501261.1|CW501261 fsbb001f296p22k0 Sorghum methylation... 62 2e-021
gb|CL150110.1|CL150110 104_331_10778290_114_31355_226 Sorgh... 58 2e-021
gb|CN129844.1|CN129844 RHOH1_37_F10.g1_A002 Acid- and alkal... 71 4e-021
gb|CW099615.1|CW099615 104_466_11003648_116_34383_022 Sorgh... 58 5e-021
gb|CF429061.1|CF429061 PH1_19_D11.g1_A002 Phosphorous-defic... 66 8e-021
gb|CW087483.1|CW087483 104_432_10947659_114_32550_046 Sorgh... 58 9e-021
gb|AY860968.1| Sorghum bicolor yellow seed1 (y1) gene, y1-r... 56 1e-020
>gb|CW314050.1|CW314050 104_804_11471615_148_35798_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471615, DNA
sequence
Length = 629
Score = 137 bits (294), Expect(2) = 2e-062
Identities = 55/57 (96%), Positives = 55/57 (96%)
Frame = +3 / +2
Query: 138 HEEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKQQAIGAIFAPP 308
HEE IIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKK QAIGAIFAPP
Sbjct: 305 HEEGIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKHQAIGAIFAPP 475
Score = 133 bits (286), Expect(3) = 4e-041
Identities = 56/63 (88%), Positives = 56/63 (88%)
Frame = -2 / -3
Query: 328 EEDEEESGGAKMAPMACCFLSFFLRWVFQ*FLMSLSVLCGR*EAMAAHLLPSKDWRWTMM 149
E D GGAKMAPMA CFLSFFLRWVFQ*FLMSLSVLCGR*EAMAAHLLPSKDWRWTMM
Sbjct: 495 ESDAGGGGGAKMAPMAWCFLSFFLRWVFQ*FLMSLSVLCGR*EAMAAHLLPSKDWRWTMM 316
Query: 148 ASS 140
SS
Sbjct: 315 PSS 307
Score = 122 bits (260), Expect(2) = 2e-062
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1 / +2
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFTP 135
YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFTP
Sbjct: 170 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFTP 304
Score = 46.9 bits (96), Expect(3) = 4e-041
Identities = 23/45 (51%), Positives = 24/45 (53%)
Frame = -3 / -2
Query: 135 RGEVAAPDXXXXXXXXXXXXXXXXXXXARVDGHGAPVARAVLLDV 1
RGEVAA D RVDG+GAPVARAVLLDV
Sbjct: 304 RGEVAAADAGAEVVGPPEAAALAAAHEPRVDGNGAPVARAVLLDV 170
Score = 25.8 bits (50), Expect(3) = 4e-041
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 343 GGTTMEEDEEES 308
G TTM+EDEEES
Sbjct: 525 GMTTMDEDEEES 490
>gb|CW041655.1|CW041655 104_275_10506672_114_30284 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506672, DNA
sequence
Length = 704
Score = 71.2 bits (149), Expect(4) = 6e-037
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +1 / -2
Query: 34 SVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFTPVTRK 147
++ I GLMRCSKSCRLRWTNYLRPGI+RGNF+ K
Sbjct: 367 TMDIYIGLMRCSKSCRLRWTNYLRPGIKRGNFSDQEEK 254
Score = 63.8 bits (133), Expect(4) = 6e-037
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +3 / -2
Query: 183 RWAAIASYLPQRTDNDIKNYWNTHLKK 263
RWA IASY+P+RTDNDIKNYW+ HLKK
Sbjct: 82 RWAEIASYMPERTDNDIKNYWSAHLKK 2
Score = 43.7 bits (89), Expect(4) = 6e-037
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +1 / -3
Query: 1 YIQEHGPGNWRSVPINTG 54
Y+Q+HGPGNWR+VP +TG
Sbjct: 534 YVQDHGPGNWRAVPTSTG 481
Score = 30.9 bits (61), Expect(4) = 6e-037
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3 / -2
Query: 141 EEAIIVHLQSLLGNR 185
EE +I+HLQ+LLGNR
Sbjct: 262 EEKLIIHLQALLGNR 218
>gb|CW491015.1|CW491015 fsbb001f280l06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f280l06, DNA
sequence
Length = 400
Score = 103 bits (219), Expect(2) = 5e-036
Identities = 39/47 (82%), Positives = 43/47 (91%)
Frame = +3 / +1
Query: 138 HEEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKQ 278
HE+ +IVHLQ+LLGNRWAAIASYLP RTDND+KNYWNTHLKKKL Q
Sbjct: 118 HEDRLIVHLQALLGNRWAAIASYLPDRTDNDVKNYWNTHLKKKLLLQ 258
Score = 67.0 bits (140), Expect(2) = 5e-036
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1 / +1
Query: 52 GLMRCSKSCRLRWTNYLRPGIRRGNFT 132
GL+RCSKSCRLRWTNYLRPGIRRG F+
Sbjct: 34 GLLRCSKSCRLRWTNYLRPGIRRGGFS 114
>gb|CW354820.1|CW354820 fsbb001f019d03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f019d03, DNA
sequence
Length = 471
Score = 85.8 bits (181), Expect(2) = 6e-036
Identities = 31/43 (72%), Positives = 39/43 (90%)
Frame = +3 / -2
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL 269
EE +I+HL SLLGN+W++IA+ LP RTDN+IKNYWNTHL+KKL
Sbjct: 161 EEKLIIHLHSLLGNKWSSIATKLPGRTDNEIKNYWNTHLRKKL 33
Score = 84.5 bits (178), Expect(2) = 6e-036
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = +1 / -2
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
YI EHG G+WR +P GL RC KSCRLRWTNYLRP I+RG FT
Sbjct: 299 YINEHGHGSWRRLPKLAGLNRCGKSCRLRWTNYLRPDIKRGRFT 168
>gb|CX611399.1|CX611399 ANR1_24_A06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_24_A06_A002 5', mRNA sequence
Length = 771
Score = 83.5 bits (176), Expect(2) = 6e-034
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +1 / +2
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
YIQ+HG G+WR++P GL RC KSCRLRWT+YLRP I+RG FT
Sbjct: 182 YIQKHGHGSWRALPRLAGLNRCGKSCRLRWTSYLRPDIKRGKFT 313
Score = 80.8 bits (170), Expect(2) = 6e-034
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = +3 / +2
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL 269
EE I+ L S+LGN+W+AIA +LP RTDN+IKN+WNTHLKKKL
Sbjct: 320 EEQTILQLHSVLGNKWSAIAKHLPGRTDNEIKNFWNTHLKKKL 448
>gb|CW258064.1|CW258064 104_723_11227672_116_35161_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227672, DNA
sequence
Length = 600
Score = 77.1 bits (162), Expect(3) = 1e-033
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = +3 / +2
Query: 183 RWAAIASYLPQRTDNDIKNYWNTHLKKKLKKQQAIGAIFAP 305
RWAAIASYLP+RTDNDIKNYWNTHLK+KL+ GA P
Sbjct: 257 RWAAIASYLPERTDNDIKNYWNTHLKRKLQSGGGDGAAKPP 379
Score = 72.5 bits (152), Expect(3) = 1e-033
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1 / +2
Query: 46 NTGLMRCSKSCRLRWTNYLRPGIRRGNFTPVTRK 147
+ GLMRCSKSCRLRWTNYLRPGI+RGNFT K
Sbjct: 14 HAGLMRCSKSCRLRWTNYLRPGIKRGNFTEQEEK 115
Score = 31.8 bits (63), Expect(3) = 1e-033
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +3 / +2
Query: 141 EEAIIVHLQSLLGNRW 188
EE +I+HLQ+LLGNR+
Sbjct: 107 EEKLIIHLQALLGNRY 154
>gb|CW026709.1|CW026709 104_252_10498105_116_30520 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10498105, DNA
sequence
Length = 602
Score = 77.1 bits (162), Expect(3) = 1e-033
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = +3 / +2
Query: 183 RWAAIASYLPQRTDNDIKNYWNTHLKKKLKKQQAIGAIFAP 305
RWAAIASYLP+RTDNDIKNYWNTHLK+KL+ GA P
Sbjct: 347 RWAAIASYLPERTDNDIKNYWNTHLKRKLQSGGGDGAAKPP 469
Score = 72.5 bits (152), Expect(3) = 1e-033
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1 / +2
Query: 46 NTGLMRCSKSCRLRWTNYLRPGIRRGNFTPVTRK 147
+ GLMRCSKSCRLRWTNYLRPGI+RGNFT K
Sbjct: 104 HAGLMRCSKSCRLRWTNYLRPGIKRGNFTEQEEK 205
Score = 31.8 bits (63), Expect(3) = 1e-033
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +3 / +2
Query: 141 EEAIIVHLQSLLGNRW 188
EE +I+HLQ+LLGNR+
Sbjct: 197 EEKLIIHLQALLGNRY 244
>gb|CN148942.1|CN148942 WOUND1_59_F10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_59_F10_A002 5', mRNA sequence
Length = 949
Score = 85.8 bits (181), Expect(2) = 2e-033
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +1 / +2
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
YI+ HG G WRS+P GLMRC KSCRLRW NYLRP ++RGNFT
Sbjct: 179 YIRAHGEGCWRSLPKAAGLMRCGKSCRLRWINYLRPDLKRGNFT 310
Score = 76.7 bits (161), Expect(2) = 2e-033
Identities = 27/43 (62%), Positives = 37/43 (86%)
Frame = +3 / +2
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL 269
E+ +I+ L SLLGN+W+ IA+ LP RTDN+IKNYWNTH+++KL
Sbjct: 317 EDDLIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIRRKL 445
>gb|CD209759.1|CD209759 HS1_54_C12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_54_C12_A012 5', mRNA sequence
Length = 709
Score = 85.8 bits (181), Expect(2) = 2e-033
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +1 / +2
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
YI+ HG G WRS+P GLMRC KSCRLRW NYLRP ++RGNFT
Sbjct: 185 YIRAHGEGCWRSLPKAAGLMRCGKSCRLRWINYLRPDLKRGNFT 316
Score = 76.7 bits (161), Expect(2) = 2e-033
Identities = 27/43 (62%), Positives = 37/43 (86%)
Frame = +3 / +2
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL 269
E+ +I+ L SLLGN+W+ IA+ LP RTDN+IKNYWNTH+++KL
Sbjct: 323 EDDLIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIRRKL 451
>gb|CN138063.1|CN138063 OX1_61_A11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_61_A11_A002 5', mRNA sequence
Length = 780
Score = 84.5 bits (178), Expect(2) = 6e-033
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +1 / +3
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
YI+ HG G WRS+P GL+RC KSCRLRW NYLRP ++RGNFT
Sbjct: 279 YIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFT 410
Score = 76.7 bits (161), Expect(2) = 6e-033
Identities = 27/43 (62%), Positives = 36/43 (83%)
Frame = +3 / +3
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL 269
E+ +I+ L SLLGN+W+ IA LP RTDN+IKNYWNTH+++KL
Sbjct: 417 EDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKL 545
>gb|CD210313.1|CD210313 HS1_50_F06.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_50_F06_A012 5', mRNA sequence
Length = 674
Score = 84.5 bits (178), Expect(2) = 6e-033
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +1 / +2
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
YI+ HG G WRS+P GL+RC KSCRLRW NYLRP ++RGNFT
Sbjct: 308 YIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFT 439
Score = 76.7 bits (161), Expect(2) = 6e-033
Identities = 27/43 (62%), Positives = 36/43 (83%)
Frame = +3 / +2
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL 269
E+ +I+ L SLLGN+W+ IA LP RTDN+IKNYWNTH+++KL
Sbjct: 446 EDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKL 574
>gb|CD428126.1|CD428126 ETH1_32_E12.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_32_E12_A002 5', mRNA sequence
Length = 608
Score = 84.5 bits (178), Expect(2) = 6e-033
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +1 / +3
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
YI+ HG G WRS+P GL+RC KSCRLRW NYLRP ++RGNFT
Sbjct: 195 YIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFT 326
Score = 76.7 bits (161), Expect(2) = 6e-033
Identities = 27/43 (62%), Positives = 36/43 (83%)
Frame = +3 / +3
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL 269
E+ +I+ L SLLGN+W+ IA LP RTDN+IKNYWNTH+++KL
Sbjct: 333 EDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKL 461
>gb|CW052419.1|CW052419 104_292_10515541_114_30188 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515541, DNA
sequence
Length = 543
Score = 74.8 bits (157), Expect(3) = 1e-032
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +3 / +3
Query: 183 RWAAIASYLPQRTDNDIKNYWNTHLKKKLKK 275
RWAAIASY+P+RTDNDIKNYWNTHLKKK K
Sbjct: 294 RWAAIASYMPERTDNDIKNYWNTHLKKKFTK 386
Score = 71.2 bits (149), Expect(3) = 1e-032
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +1 / +3
Query: 34 SVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFTPVTRK 147
++ I GLMRCSKSCRLRWTNYLRPGI+RGNF+ K
Sbjct: 9 TMDIYIGLMRCSKSCRLRWTNYLRPGIKRGNFSDQEEK 122
Score = 30.9 bits (61), Expect(3) = 1e-032
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3 / +3
Query: 141 EEAIIVHLQSLLGNR 185
EE +I+HLQ+LLGNR
Sbjct: 114 EEKLIIHLQALLGNR 158
>gb|CW052420.1|CW052420 104_292_10515541_114_30286 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515541, DNA
sequence
Length = 565
Score = 74.8 bits (157), Expect(3) = 1e-032
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +3 / +3
Query: 183 RWAAIASYLPQRTDNDIKNYWNTHLKKKLKK 275
RWAAIASY+P+RTDNDIKNYWNTHLKKK K
Sbjct: 291 RWAAIASYMPERTDNDIKNYWNTHLKKKFTK 383
Score = 71.2 bits (149), Expect(3) = 1e-032
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +1 / +3
Query: 34 SVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFTPVTRK 147
++ I GLMRCSKSCRLRWTNYLRPGI+RGNF+ K
Sbjct: 6 TMDIYIGLMRCSKSCRLRWTNYLRPGIKRGNFSDQEEK 119
Score = 30.9 bits (61), Expect(3) = 1e-032
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3 / +3
Query: 141 EEAIIVHLQSLLGNR 185
EE +I+HLQ+LLGNR
Sbjct: 111 EEKLIIHLQALLGNR 155
>gb|CD212966.1|CD212966 HS1_17_F02.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_17_F02_A012 5', mRNA sequence
Length = 595
Score = 84.5 bits (178), Expect(2) = 1e-032
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +1 / +2
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
YI+ HG G WRS+P GL+RC KSCRLRW NYLRP ++RGNFT
Sbjct: 311 YIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFT 442
Score = 75.3 bits (158), Expect(2) = 1e-032
Identities = 27/43 (62%), Positives = 35/43 (81%)
Frame = +3 / +2
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL 269
E+ +I+ L SLLGN+W+ IA LP RTDN+IKNYWNTH+ +KL
Sbjct: 449 EDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIXRKL 577
>gb|AF474125.1| Sorghum bicolor typical A-type R2R3 Myb protein (MybY1) gene,
partial cds
Length = 318
Score = 84.0 bits (177), Expect(2) = 3e-032
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +1 / +1
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
YI EHG G+WRS+P N GL+RC KSCRLRW NYLR ++RGN +
Sbjct: 52 YIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNIS 183
Score = 73.5 bits (154), Expect(2) = 3e-032
Identities = 26/43 (60%), Positives = 35/43 (81%)
Frame = +3 / +1
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL 269
EE II+ L + LGNRW+ IAS+ P RTDN+IKNYWN+HL +++
Sbjct: 190 EEDIIIKLHATLGNRWSLIASHFPGRTDNEIKNYWNSHLSRQI 318
>gb|CX611811.1|CX611811 ANR1_26_H01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_26_H01_A002 5', mRNA sequence
Length = 808
Score = 81.3 bits (171), Expect(2) = 3e-032
Identities = 29/43 (67%), Positives = 39/43 (90%)
Frame = +3 / +2
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL 269
EE I+HL S+LGN+W+AIA++LP RTD++IKN+WNTHLKK+L
Sbjct: 380 EEQTILHLHSVLGNKWSAIATHLPGRTDDEIKNFWNTHLKKRL 508
Score = 77.6 bits (163), Expect(2) = 3e-032
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +1 / +2
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
YIQ++G G+WR++P GL C KSCRLRWTNYLRP I+RG F+
Sbjct: 242 YIQKNGHGSWRTLPRLAGLNGCGKSCRLRWTNYLRPDIKRGKFS 373
>gb|CW219513.1|CW219513 104_653_11196814_116_37144_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11196814, DNA
sequence
Length = 701
Score = 74.8 bits (157), Expect(3) = 4e-032
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +3 / +3
Query: 183 RWAAIASYLPQRTDNDIKNYWNTHLKKKLKK 275
RWAAIASY+P+RTDNDIKNYWNTHLKKK K
Sbjct: 378 RWAAIASYMPERTDNDIKNYWNTHLKKKFTK 470
Score = 71.2 bits (149), Expect(3) = 4e-032
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +1 / +3
Query: 34 SVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFTPVTRK 147
++ I GLMRCSKSCRLRWTNYLRPGI+RGNF+ K
Sbjct: 93 TMDIYIGLMRCSKSCRLRWTNYLRPGIKRGNFSDQEEK 206
Score = 30.9 bits (61), Expect(3) = 4e-032
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3 / +3
Query: 141 EEAIIVHLQSLLGNR 185
EE +I+HLQ+LLGNR
Sbjct: 198 EEKLIIHLQALLGNR 242
>gb|CN138550.1|CN138550 OX1_64_A08.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_64_A08_A002 5', mRNA sequence
Length = 876
Score = 79.4 bits (167), Expect(2) = 4e-032
Identities = 31/49 (63%), Positives = 31/49 (63%)
Frame = +1 / +3
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFTPVTRK 147
YI HG G W VP GL RC KSCRLRW NYLRP IRRG FT K
Sbjct: 252 YITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTAEEEK 398
Score = 79.0 bits (166), Expect(2) = 4e-032
Identities = 28/45 (62%), Positives = 39/45 (86%)
Frame = +3 / +3
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKK 275
EE +I+ L +++GNRWA IAS+LP RTDN+IKNYWN+ +KKK++K
Sbjct: 390 EEKLIISLHAIVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRK 524
>gb|CW115795.1|CW115795 104_491_11106754_148_34597_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11106754, DNA
sequence
Length = 559
Score = 73.0 bits (153), Expect(3) = 4e-032
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +3 / +1
Query: 183 RWAAIASYLPQRTDNDIKNYWNTHLKKKLKK 275
RWAAIASY+P+RTDNDI+NYWNTHLKKK K
Sbjct: 430 RWAAIASYMPERTDNDIENYWNTHLKKKFTK 522
Score = 71.2 bits (149), Expect(3) = 4e-032
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +1 / +1
Query: 34 SVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFTPVTRK 147
++ I GLMRCSKSCRLRWTNYLRPGI+RGNF+ K
Sbjct: 145 TMDIYIGLMRCSKSCRLRWTNYLRPGIKRGNFSDQEEK 258
Score = 30.9 bits (61), Expect(3) = 4e-032
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3 / +1
Query: 141 EEAIIVHLQSLLGNR 185
EE +I+HLQ+LLGNR
Sbjct: 250 EEKLIIHLQALLGNR 294
>gb|CD429271.1|CD429271 ETH1_3_B10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_3_B10_A002 5', mRNA sequence
Length = 564
Score = 84.5 bits (178), Expect(2) = 7e-032
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +1 / +2
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
YI+ HG G WRS+P GL+RC KSCRLRW NYLRP ++RGNFT
Sbjct: 302 YIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFT 433
Score = 72.5 bits (152), Expect(2) = 7e-032
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = +3 / +2
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKK 263
E+ +I+ L SLLGN+W+ IA LP RTDN+IKNYWNTH+++
Sbjct: 440 EDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRR 562
>gb|BE361115.1|BE361115 DG1_70_A01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 590
Score = 84.5 bits (178), Expect(2) = 1e-031
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +1 / +3
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
YI+ HG G WRS+P GL+RC KSCRLRW NYLRP ++RGNFT
Sbjct: 303 YIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFT 434
Score = 72.5 bits (152), Expect(2) = 1e-031
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +3 / +3
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL 269
E+ +I+ L GN+W+ IA LP RTDN+IKNYWNTH+K+KL
Sbjct: 441 EDELIIKFHELFGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 569
>gb|CW090149.1|CW090149 104_435_10949116_116_32599_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10949116, DNA
sequence
Length = 709
Score = 72.1 bits (151), Expect(4) = 1e-031
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = +1 / -3
Query: 52 GLMRCSKSCRLRWTNYLRPGIRRGNFTPVTRK 147
GLMRCSKSCRLRWTNYLRPGI+RGNFT K
Sbjct: 311 GLMRCSKSCRLRWTNYLRPGIKRGNFTDQEEK 216
Score = 49.2 bits (101), Expect(4) = 1e-031
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -2
Query: 1 YIQEHGPGNWRSVPINTGL 57
Y+QEHGPGNWR+VP NTGL
Sbjct: 483 YVQEHGPGNWRAVPTNTGL 427
Score = 37.7 bits (76), Expect(4) = 1e-031
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +3 / -3
Query: 183 RWAAIASYLPQRTDN 227
RWAAIASY+P+RTDN
Sbjct: 47 RWAAIASYMPERTDN 3
Score = 32.2 bits (64), Expect(4) = 1e-031
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +3 / -3
Query: 141 EEAIIVHLQSLLGNRWAAIAS 203
EE +I+HLQ+LLGNR ++AS
Sbjct: 224 EEKLIIHLQALLGNR**SLAS 162
>gb|BE356993.1|BE356993 DG1_146_C10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 531
Score = 79.9 bits (168), Expect(2) = 2e-030
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +1 / +2
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
+IQ G NWR++P GL+RC KSCRLRW NYLRP I+RGNF+
Sbjct: 17 HIQSFGHSNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFS 148
Score = 72.1 bits (151), Expect(2) = 2e-030
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +3 / +2
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLK 272
EE I+ L LGNRW+AIA+ LP RTDN+IKN W+THLKK+L+
Sbjct: 155 EEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLE 286
>gb|BE357013.1|BE357013 DG1_146_C11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 530
Score = 79.9 bits (168), Expect(2) = 2e-030
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +1 / +2
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
+IQ G NWR++P GL+RC KSCRLRW NYLRP I+RGNF+
Sbjct: 17 HIQSFGHSNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFS 148
Score = 72.1 bits (151), Expect(2) = 2e-030
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +3 / +2
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLK 272
EE I+ L LGNRW+AIA+ LP RTDN+IKN W+THLKK+L+
Sbjct: 155 EEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLE 286
>gb|CN149909.1|CN149909 WOUND1_65_D11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_65_D11_A002 5', mRNA sequence
Length = 767
Score = 79.9 bits (168), Expect(2) = 3e-030
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +1 / +1
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
+IQ G NWR++P GL+RC KSCRLRW NYLRP I+RGNF+
Sbjct: 274 HIQSFGHSNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFS 405
Score = 72.1 bits (151), Expect(2) = 3e-030
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +3 / +1
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLK 272
EE I+ L LGNRW+AIA+ LP RTDN+IKN W+THLKK+L+
Sbjct: 412 EEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNVWDTHLKKRLE 543
>gb|CF429105.1|CF429105 PH1_19_F05.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_19_F05_A002 5', mRNA sequence
Length = 628
Score = 79.9 bits (168), Expect(2) = 3e-030
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +1 / +1
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
+IQ G NWR++P GL+RC KSCRLRW NYLRP I+RGNF+
Sbjct: 286 HIQSFGHSNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFS 417
Score = 72.1 bits (151), Expect(2) = 3e-030
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +3 / +1
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLK 272
EE I+ L LGNRW+AIA+ LP RTDN+IKN W+THLKK+L+
Sbjct: 424 EEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLE 555
>gb|CD214131.1|CD214131 HS1_70_D11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_70_D11_A012 5', mRNA sequence
Length = 593
Score = 79.9 bits (168), Expect(2) = 3e-030
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +1 / +1
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
+IQ G NWR++P GL+RC KSCRLRW NYLRP I+RGNF+
Sbjct: 274 HIQSFGHSNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFS 405
Score = 72.1 bits (151), Expect(2) = 3e-030
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +3 / +1
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLK 272
EE I+ L LGNRW+AIA+ LP RTDN+IKN W+THLKK+L+
Sbjct: 412 EEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLE 543
>gb|CX610466.1|CX610466 ANR1_18_H10.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_H10_A002 5', mRNA sequence
Length = 671
Score = 78.0 bits (164), Expect(2) = 4e-030
Identities = 28/62 (45%), Positives = 45/62 (72%)
Frame = +3 / +2
Query: 120 RQLHPGHEEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKQQAIGAIF 299
R + EE +I++LQ+ LGN+W+ IA +LP RTDN++KNYWN++LKK++ + Q +
Sbjct: 278 RGMFSQEEEDVIINLQAKLGNKWSQIAMHLPGRTDNEVKNYWNSYLKKRVMQAQGASSNS 457
Query: 300 AP 305
+P
Sbjct: 458 SP 463
Score = 73.5 bits (154), Expect(2) = 4e-030
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = +1 / +2
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
YI +HG G W +VP GL R KSCRLRW NYLRPG++RG F+
Sbjct: 161 YILKHGLGCWSAVPAKAGLQRNGKSCRLRWINYLRPGLKRGMFS 292
>gb|CW491260.1|CW491260 fsbb001f281a22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f281a22, DNA
sequence
Length = 623
Score = 85.8 bits (181), Expect(3) = 5e-030
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +1 / -1
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
YI+ HG G WRS+P GLMRC KSCRLRW NYLRP ++RGNFT
Sbjct: 470 YIRAHGEGCWRSLPKAAGLMRCGKSCRLRWINYLRPDLKRGNFT 339
Score = 59.3 bits (123), Expect(3) = 5e-030
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +3 / -2
Query: 183 RWAAIASYLPQRTDNDIKNYWNTHLKKKL 269
RW+ IA+ LP RTDN+IKNYWNTH+++KL
Sbjct: 148 RWSLIAARLPGRTDNEIKNYWNTHIRRKL 62
Score = 24.0 bits (46), Expect(3) = 5e-030
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +3 / -1
Query: 141 EEAIIVHLQSLLGNRWAA 194
E+ +I+ L SLLGN++ +
Sbjct: 332 EDDLIIKLHSLLGNKYVS 279
>gb|CW414653.1|CW414653 fsbb001f114g17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f114g17, DNA
sequence
Length = 669
Score = 85.8 bits (181), Expect(3) = 6e-030
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +1 / -3
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
YI+ HG G WRS+P GLMRC KSCRLRW NYLRP ++RGNFT
Sbjct: 586 YIRAHGEGCWRSLPKAAGLMRCGKSCRLRWINYLRPDLKRGNFT 455
Score = 59.3 bits (123), Expect(3) = 6e-030
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +3 / -1
Query: 183 RWAAIASYLPQRTDNDIKNYWNTHLKKKL 269
RW+ IA+ LP RTDN+IKNYWNTH+++KL
Sbjct: 264 RWSLIAARLPGRTDNEIKNYWNTHIRRKL 178
Score = 24.0 bits (46), Expect(3) = 6e-030
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 141 EEAIIVHLQSLLGNRWAA 194
E+ +I+ L SLLGN++ +
Sbjct: 448 EDDLIIKLHSLLGNKYVS 395
>gb|CW163341.1|CW163341 104_571_11151411_116_36453_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151411, DNA
sequence
Length = 707
Score = 85.8 bits (181), Expect(3) = 7e-030
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +1 / +2
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
YI+ HG G WRS+P GLMRC KSCRLRW NYLRP ++RGNFT
Sbjct: 167 YIRAHGEGCWRSLPKAAGLMRCGKSCRLRWINYLRPDLKRGNFT 298
Score = 59.3 bits (123), Expect(3) = 7e-030
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +3 / +3
Query: 183 RWAAIASYLPQRTDNDIKNYWNTHLKKKL 269
RW+ IA+ LP RTDN+IKNYWNTH+++KL
Sbjct: 489 RWSLIAARLPGRTDNEIKNYWNTHIRRKL 575
Score = 24.0 bits (46), Expect(3) = 7e-030
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +3 / +2
Query: 141 EEAIIVHLQSLLGNRWAA 194
E+ +I+ L SLLGN++ +
Sbjct: 305 EDDLIIKLHSLLGNKYVS 358
>gb|AW563849.1|AW563849 LG1_272_G12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 79.9 bits (168), Expect(2) = 1e-029
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +1 / +3
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
+IQ G NWR++P GL+RC KSCRLRW NYLRP I+RGNF+
Sbjct: 261 HIQSFGHSNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFS 392
Score = 69.8 bits (146), Expect(2) = 1e-029
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +3 / +3
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKK 266
EE I+ L LGNRW+AIA+ LP RTDN+IKN W+THLKK+
Sbjct: 399 EEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNVWHTHLKKR 524
>gb|CN149937.1|CN149937 WOUND1_65_G12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_65_G12_A002 5', mRNA sequence
Length = 748
Score = 79.0 bits (166), Expect(2) = 1e-029
Identities = 26/46 (56%), Positives = 41/46 (89%)
Frame = +3 / +1
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKQ 278
EE +I+HL SLLGN+W+ IA+ LP RTDN++KN+WN+++KK+L+++
Sbjct: 373 EEDLIIHLHSLLGNKWSQIAAQLPGRTDNEVKNFWNSYIKKRLRER 510
Score = 71.2 bits (149), Expect(2) = 1e-029
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = +1 / +1
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
+I ++G G W SVP GL RC KSCRLRW NYLRP ++RG F+
Sbjct: 235 HIAQYGHGCWSSVPKLAGLERCGKSCRLRWINYLRPDLKRGTFS 366
>gb|CD224966.1|CD224966 CCC1_37_B09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_37_B09_A007 5', mRNA sequence
Length = 592
Score = 79.9 bits (168), Expect(2) = 2e-029
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +1 / +3
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
+IQ G NWR++P GL+RC KSCRLRW NYLRP I+RGNF+
Sbjct: 276 HIQSFGHSNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFS 407
Score = 69.3 bits (145), Expect(2) = 2e-029
Identities = 27/44 (61%), Positives = 34/44 (77%)
Frame = +3 / +3
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLK 272
EE I+ L LGNRW+AIA+ LP RTDN+IKN W+THL K+L+
Sbjct: 414 EEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNVWHTHLXKRLE 545
>gb|AW563989.1|AW563989 LG1_281_D10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 523
Score = 78.5 bits (165), Expect(2) = 2e-029
Identities = 25/46 (54%), Positives = 41/46 (89%)
Frame = +3 / +3
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKQ 278
EE +I+HL S++GN+W+ IA+ LP RTDN++KN+WN+++KKKL+++
Sbjct: 162 EEDLIIHLHSMMGNKWSQIATQLPGRTDNEVKNFWNSYIKKKLRQR 299
Score = 69.8 bits (146), Expect(2) = 2e-029
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = +1 / +3
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
+I ++G G W SVP GL RC KSCRLRW NYLRP ++RG F+
Sbjct: 24 HIAKYGHGCWSSVPKLAGLERCGKSCRLRWINYLRPDLKRGAFS 155
>gb|CL180232.1|CL180232 104_389_10895849_116_31908_377 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10895849, DNA
sequence
Length = 707
Score = 84.5 bits (178), Expect(3) = 6e-029
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +3 / +3
Query: 183 RWAAIASYLPQRTDNDIKNYWNTHLKKKLKKQQA 284
RWAAIASYLP+RTDNDIKNYWNTHLKKKLKK QA
Sbjct: 237 RWAAIASYLPERTDNDIKNYWNTHLKKKLKKMQA 338
Score = 48.7 bits (100), Expect(3) = 6e-029
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +1 / +1
Query: 79 RLRWTNYLRPGIRRGNFTPVTRK 147
RLRWTNYLRPGI+RGNFT K
Sbjct: 1 RLRWTNYLRPGIKRGNFTDQEEK 69
Score = 32.2 bits (64), Expect(3) = 6e-029
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +3 / +1
Query: 141 EEAIIVHLQSLLGNRWAAIAS 203
EE +I+HLQ+LLGNR ++AS
Sbjct: 61 EEKLIIHLQALLGNR**SLAS 123
>gb|CD429496.1|CD429496 ETH1_4_D02.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_4_D02_A002 5', mRNA sequence
Length = 551
Score = 79.9 bits (168), Expect(2) = 9e-029
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +1 / +2
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
+IQ G NWR++P GL+RC KSCRLRW NYLRP I+RGNF+
Sbjct: 293 HIQSFGHSNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFS 424
Score = 66.6 bits (139), Expect(2) = 9e-029
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +3 / +2
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLK 260
EE I+ L LGNRW+AIA+ LP RTDN+IKN W+THLK
Sbjct: 431 EEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNVWHTHLK 550
>gb|CW057886.1|CW057886 104_300_10518454_1_30040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518454, DNA
sequence
Length = 618
Score = 84.5 bits (178), Expect(2) = 1e-028
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +1 / +3
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
+I+ HG NWR++P GL+RC KSCRLRW NYLRP I+RGNFT
Sbjct: 156 HIERHGHSNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFT 287
Score = 62.5 bits (130), Expect(2) = 1e-028
Identities = 25/53 (47%), Positives = 34/53 (64%)
Frame = +3 / +3
Query: 114 PARQLHPGHEEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLK 272
P R+L + L + RW+AIA+ LP RTDN+IKN W+THLKK+L+
Sbjct: 429 PRRRLRRNQRACALTQLVLCMVFRWSAIAARLPGRTDNEIKNVWHTHLKKRLE 587
>gb|BF655998.1|BF655998 FM1_42_F08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 507
Score = 73.5 bits (154), Expect(2) = 2e-028
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = +1 / +3
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
+I +HG G W SVP GL RC KSCRLRW NYLRP ++RG F+
Sbjct: 18 HITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFS 149
Score = 72.1 bits (151), Expect(2) = 2e-028
Identities = 26/46 (56%), Positives = 38/46 (82%)
Frame = +3 / +3
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKQ 278
EE +I+ L ++LGNRW+ IA+ LP RTDN+IKN WN+ +KKKL+++
Sbjct: 156 EEELIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 293
>gb|CX608115.1|CX608115 ANR1_32_F03.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_32_F03_A002 5', mRNA sequence
Length = 586
Score = 76.7 bits (161), Expect(2) = 2e-028
Identities = 28/45 (62%), Positives = 36/45 (80%)
Frame = +3 / +2
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKK 275
EE +++ L LGNRW+ IA+ LP RTDN+IKN+WNTH+KKKL K
Sbjct: 395 EEQVVIDLHGKLGNRWSKIAAKLPGRTDNEIKNHWNTHIKKKLIK 529
Score = 68.9 bits (144), Expect(2) = 2e-028
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = +1 / +2
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
+I +G WR+VP GL+RC KSCRLRWTNYLRP ++RG T
Sbjct: 257 FILTNGHCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLT 388
>gb|CX616786.1|CX616786 GABR1_29_H12.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_29_H12_A002 5', mRNA sequence
Length = 745
Score = 75.3 bits (158), Expect(2) = 2e-028
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = +3 / +3
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKQ 278
EE IV L +LGNRW+ IAS+LP RTDN+IKN+WN+ LKKKL+++
Sbjct: 549 EEDAIVGLHEILGNRWSQIASHLPGRTDNEIKNFWNSCLKKKLRQR 686
Score = 70.7 bits (148), Expect(2) = 2e-028
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = +1 / +3
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
+I +G G W SVP GL RC KSCRLRW NYLRP ++RG+F+
Sbjct: 411 HIIRYGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFS 542
>gb|CD235285.1|CD235285 SS1_28_H11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_28_H11_A012 5', mRNA sequence
Length = 650
Score = 75.3 bits (158), Expect(2) = 2e-028
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = +3 / +1
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKQ 278
EE IV L +LGNRW+ IAS+LP RTDN+IKN+WN+ LKKKL+++
Sbjct: 394 EEDAIVGLHEILGNRWSQIASHLPGRTDNEIKNFWNSCLKKKLRQR 531
Score = 70.7 bits (148), Expect(2) = 2e-028
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = +1 / +1
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
+I +G G W SVP GL RC KSCRLRW NYLRP ++RG+F+
Sbjct: 256 HIIRYGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFS 387
>gb|CN139844.1|CN139844 OX1_24_B03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_B03_A002 5', mRNA sequence
Length = 745
Score = 73.5 bits (154), Expect(2) = 2e-028
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = +1 / +3
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
+I +HG G W SVP GL RC KSCRLRW NYLRP ++RG F+
Sbjct: 324 HITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFS 455
Score = 72.1 bits (151), Expect(2) = 2e-028
Identities = 26/46 (56%), Positives = 38/46 (82%)
Frame = +3 / +3
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKQ 278
EE +I+ L ++LGNRW+ IA+ LP RTDN+IKN WN+ +KKKL+++
Sbjct: 462 EEELIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 599
>gb|AW672062.1|AW672062 LG1_354_G05.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 601
Score = 73.5 bits (154), Expect(2) = 2e-028
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = +1 / +2
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
+I +HG G W SVP GL RC KSCRLRW NYLRP ++RG F+
Sbjct: 149 HITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFS 280
Score = 72.1 bits (151), Expect(2) = 2e-028
Identities = 26/46 (56%), Positives = 38/46 (82%)
Frame = +3 / +2
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKQ 278
EE +I+ L ++LGNRW+ IA+ LP RTDN+IKN WN+ +KKKL+++
Sbjct: 287 EEELIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 424
>gb|CX608930.1|CX608930 ANR1_9_D06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_9_D06_A002 5', mRNA sequence
Length = 831
Score = 72.1 bits (151), Expect(2) = 6e-028
Identities = 26/46 (56%), Positives = 38/46 (82%)
Frame = +3 / +1
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKQ 278
EE +I+ L ++LGNRW+ IA+ LP RTDN+IKN WN+ +KKKL+++
Sbjct: 487 EEDLIIELHAVLGNRWSQIATRLPGRTDNEIKNLWNSSIKKKLRQR 624
Score = 72.1 bits (151), Expect(2) = 6e-028
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = +1 / +1
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
+I +HG G W +VP GL RC KSCRLRW NYLRP ++RG F+
Sbjct: 349 HITKHGHGCWSTVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFS 480
>gb|CD226268.1|CD226268 CCC1_44_D06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_44_D06_A007 5', mRNA sequence
Length = 665
Score = 72.1 bits (151), Expect(2) = 6e-028
Identities = 26/46 (56%), Positives = 38/46 (82%)
Frame = +3 / +2
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKQ 278
EE +I+ L ++LGNRW+ IA+ LP RTDN+IKN WN+ +KKKL+++
Sbjct: 395 EEDLIIELHAVLGNRWSQIATRLPGRTDNEIKNLWNSSIKKKLRQK 532
Score = 72.1 bits (151), Expect(2) = 6e-028
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = +1 / +2
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
+I +HG G W +VP GL RC KSCRLRW NYLRP ++RG F+
Sbjct: 257 HITKHGHGCWSTVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFS 388
>gb|CW258813.1|CW258813 104_724_11228081_116_35162_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11228081, DNA
sequence
Length = 623
Score = 82.6 bits (174), Expect(2) = 1e-027
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +1 / +1
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
YI+ HG G WRS+P GL RC KSCRLRW NYLRP ++RGNFT
Sbjct: 97 YIRAHGEGCWRSLPKAAGLPRCGKSCRLRWMNYLRPDLKRGNFT 228
Score = 61.1 bits (127), Expect(2) = 1e-027
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +3 / +3
Query: 156 VHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL 269
V L S RW+ IA LP RTDN+IKNYWNTH+K+KL
Sbjct: 405 VLLLSYPHRRWSLIAGQLPGRTDNEIKNYWNTHIKRKL 518
>gb|CW340501.1|CW340501 104_841_11485831_148_36147_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485831, DNA
sequence
Length = 690
Score = 82.6 bits (174), Expect(2) = 2e-027
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +1 / -1
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
YI+ HG G WRS+P GL RC KSCRLRW NYLRP ++RGNFT
Sbjct: 429 YIRAHGEGCWRSLPKAAGLPRCGKSCRLRWMNYLRPDLKRGNFT 298
Score = 61.1 bits (127), Expect(2) = 2e-027
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +3 / -3
Query: 156 VHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL 269
V L S RW+ IA LP RTDN+IKNYWNTH+K+KL
Sbjct: 121 VLLLSYPHRRWSLIAGQLPGRTDNEIKNYWNTHIKRKL 8
>gb|CW077690.1|CW077690 104_384_10893622_116_31916_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10893622, DNA
sequence
Length = 723
Score = 82.6 bits (174), Expect(2) = 2e-027
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +1 / +1
Query: 1 YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFT 132
YI+ HG G WRS+P GL RC KSCRLRW NYLRP ++RGNFT
Sbjct: 166 YIRAHGEGCWRSLPKAAGLPRCGKSCRLRWMNYLRPDLKRGNFT 297
Score = 61.1 bits (127), Expect(2) = 2e-027
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +3 / +3
Query: 156 VHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL 269
V L S RW+ IA LP RTDN+IKNYWNTH+K+KL
Sbjct: 474 VLLLSYPHRRWSLIAGQLPGRTDNEIKNYWNTHIKRKL 587
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 299,767,718
Number of Sequences: 832831
Number of extensions: 3117401
Number of successful extensions: 148458
Number of sequences better than 1.0e-020: 124
length of database: 163,786,556
effective HSP length: 52
effective length of database: 120,479,344
effective search space used: 9879306208
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)