TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8228901.3.1
(1173 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN148934.1|CN148934 WOUND1_59_E11.g1_A002 Wounded leaves... 191 4e-094
gb|CW186827.1|CW186827 104_605_11166770_148_36715_015 Sorgh... 168 3e-072
gb|CL167818.1|CL167818 104_365_10810355_116_31805_035 Sorgh... 168 3e-072
gb|CW462407.1|CW462407 fsbb001f210i19k0 Sorghum methylation... 109 3e-050
gb|CW209767.1|CW209767 104_640_11189429_148_37429_031 Sorgh... 125 7e-047
gb|CD211984.1|CD211984 HS1_67_B09.g1_A012 Heat-shocked seed... 73 5e-043
gb|CL182327.1|CL182327 104_393_10897349_148_31921_341 Sorgh... 68 1e-041
gb|CN141588.1|CN141588 OX1_52_D05.g1_A002 Oxidatively-stres... 105 6e-039
gb|CD428545.1|CD428545 ETH1_27_H10.g1_A002 Ethylene-treated... 105 1e-038
gb|CD428471.1|CD428471 ETH1_31_F12.g1_A002 Ethylene-treated... 105 1e-038
gb|CN134682.1|CN134682 OX1_27_G04.g1_A002 Oxidatively-stres... 106 1e-038
gb|CX613827.1|CX613827 GABR1_10_A04.g1_A002 GA- or brassino... 105 1e-038
gb|CN144511.1|CN144511 WOUND1_22_G08.g1_A002 Wounded leaves... 105 1e-038
gb|CL698595.2|CL698595 SP__Ba0032E06.r SP__Ba Sorghum propi... 108 2e-038
gb|BM323183.1|BM323183 PIC1_16_C08.b1_A002 Pathogen-infecte... 110 8e-038
gb|BM325945.1|BM325945 PIC1_54_G06.b1_A002 Pathogen-infecte... 110 2e-037
gb|BM324556.1|BM324556 PIC1_32_G01.b1_A002 Pathogen-infecte... 110 2e-037
gb|BE599170.1|BE599170 PI1_86_C05.b1_A002 Pathogen induced ... 110 2e-037
gb|BM322891.1|BM322891 PIC1_14_F07.b1_A002 Pathogen-infecte... 110 2e-037
gb|BM325147.1|BM325147 PIC1_40_C04.b1_A002 Pathogen-infecte... 110 2e-037
gb|BM325840.1|BM325840 PIC1_53_E01.b1_A002 Pathogen-infecte... 110 2e-037
gb|CD235156.1|CD235156 SS1_21_C09.g1_A012 Salt-stressed see... 103 1e-036
gb|CD463447.1|CD463447 ETH1_44_D02.g1_A002 Ethylene-treated... 105 1e-036
gb|BM324821.1|BM324821 PIC1_36_B07.b1_A002 Pathogen-infecte... 105 1e-036
gb|BM323962.1|BM323962 PIC1_29_G01.b1_A002 Pathogen-infecte... 110 3e-036
gb|BM323153.1|BM323153 PIC1_8_A04.b1_A002 Pathogen-infected... 110 3e-036
gb|CD462463.1|CD462463 ETH1_37_D09.g1_A002 Ethylene-treated... 101 6e-036
gb|CD231033.1|CD231033 SS1_7_C11.g1_A012 Salt-stressed seed... 100 1e-035
gb|CF756059.1|CF756059 DSAF1_3_F03.b1_A011 Drought-stressed... 94 2e-035
gb|CW065635.1|CW065635 104_312_10523257_114_30129 Sorghum m... 94 5e-035
gb|CN134837.1|CN134837 OX1_28_G03.g1_A002 Oxidatively-stres... 70 3e-034
gb|CN143383.1|CN143383 WOUND1_15_H12.g1_A002 Wounded leaves... 105 4e-032
gb|BM324133.1|BM324133 PIC1_24_E11.b1_A002 Pathogen-infecte... 110 4e-032
gb|BM325132.1|BM325132 PIC1_40_D03.b1_A002 Pathogen-infecte... 106 3e-031
gb|CW065636.1|CW065636 104_312_10523257_115_30130 Sorghum m... 91 4e-031
gb|CW477828.1|CW477828 fsbb001f235f19f0 Sorghum methylation... 73 3e-030
gb|BM324148.1|BM324148 PIC1_24_G05.b1_A002 Pathogen-infecte... 73 5e-029
gb|CW148147.1|CW148147 104_542_11140260_116_35003_038 Sorgh... 60 8e-029
gb|BG051230.1|BG051230 FM1_57_H01.b1_A003 Floral-Induced Me... 101 8e-029
gb|BM324826.1|BM324826 PIC1_36_C02.b1_A002 Pathogen-infecte... 71 2e-028
gb|BM325406.1|BM325406 PIC1_44_B08.b1_A002 Pathogen-infecte... 71 2e-028
gb|CN142539.1|CN142539 WOUND1_10_D07.g1_A002 Wounded leaves... 75 9e-027
gb|CW160293.1|CW160293 104_566_11149807_116_36428_020 Sorgh... 66 1e-026
gb|CL184871.1|CL184871 104_398_10899146_116_32373_007 Sorgh... 66 1e-026
gb|CW104023.1|CW104023 104_472_11012205_116_34432_081 Sorgh... 66 1e-026
gb|CL184870.1|CL184870 104_398_10899146_114_32369_007 Sorgh... 66 1e-026
gb|BZ333147.1|BZ333147 hx56b02.b1 WGS-SbicolorF (JM107 adap... 66 1e-025
gb|AW563740.1|AW563740 LG1_248_A08.g1_A002 Light Grown 1 (L... 70 2e-025
gb|CL156285.1|CL156285 104_343_10782760_116_31476_088 Sorgh... 79 6e-023
>gb|CN148934.1|CN148934 WOUND1_59_E11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_59_E11_A002 5', mRNA sequence
Length = 906
Score = 191 bits (412), Expect(2) = 4e-094
Identities = 80/92 (86%), Positives = 85/92 (92%)
Frame = +2 / +3
Query: 59 QVAAMPMTIERDLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVV 238
Q+AAMPM IERDLHMATGNGETSYTKNSRIQEK MF +KPVLEEATR Y+ALLP+TMVV
Sbjct: 72 QLAAMPMRIERDLHMATGNGETSYTKNSRIQEKAMFHMKPVLEEATREVYTALLPKTMVV 251
Query: 239 ADLGCSSGPNTLRFISEVIGIIARHCKEHDRR 334
ADLGCSSGPNTLRF+SEVIGIIARHCKE D R
Sbjct: 252 ADLGCSSGPNTLRFVSEVIGIIARHCKELDDR 347
Score = 176 bits (378), Expect(2) = 4e-094
Identities = 70/87 (80%), Positives = 76/87 (87%)
Frame = +2 / +3
Query: 344 PQLQFFLNDLPGNDFNNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPS 523
PQLQFF NDLPGNDFNNLF LIQQF+KS AR HKGEA EALPPCYI+GLPGS+YTRIFPS
Sbjct: 363 PQLQFFPNDLPGNDFNNLFQLIQQFHKSTARKHKGEAEEALPPCYITGLPGSYYTRIFPS 542
Query: 524 ESVHLFHSLFSVHWHSQASQQLKDTQK 604
ESVHLFHSLF + W SQA +QLK +K
Sbjct: 543 ESVHLFHSLFCLQWRSQAPEQLKGIKK 623
Score = 174 bits (375), Expect(3) = 4e-079
Identities = 75/100 (75%), Positives = 82/100 (82%)
Frame = -3 / -2
Query: 355 LKLWVVMSSVVFFAMASYDANHLGDEAQCVRPR*AA*VGHDHGLREES*VCCSSGLLKDW 176
L+ V+ S V F AMASYDANHLGDEAQCVRPR*AA*VGH HG REES V SSGLLKD
Sbjct: 368 LRRAVMSSVVKFLAMASYDANHLGDEAQCVRPR*AA*VGHHHGFREESCVYFSSGLLKDR 189
Query: 175 LDLKHNFLLNPRVFRVASFSVPCGHVEITLDCHWHGCNLQ 56
L +KH+FLLNPR+F VASFS+PC HVEITLD H HGC L+
Sbjct: 188 LHVKHSFLLNPRIFCVASFSIPCSHVEITLDSHGHGCELR 69
Score = 169 bits (364), Expect(3) = 6e-065
Identities = 75/86 (87%), Positives = 80/86 (93%)
Frame = -1 / -3
Query: 318 LQWRAMMPITSEMKRSVLGPDEQPKSATTMV*GRRAEYAALVASSRTGLI*NITFS*ILE 139
LQWRAMMPITSE KRSVLGPDEQPKSATTMV GRRA Y +LVASSRTG +*NI FS*ILE
Sbjct: 331 LQWRAMMPITSETKRSVLGPDEQPKSATTMVLGRRAVYTSLVASSRTGFM*NIAFS*ILE 152
Query: 138 FFV*LVSPFPVAMWRSRSIVIGMAAT 61
FFV*LVSPFPVAMWRSRSI++GMAA+
Sbjct: 151 FFV*LVSPFPVAMWRSRSILMGMAAS 74
Score = 147 bits (315), Expect(2) = 5e-059
Identities = 65/99 (65%), Positives = 72/99 (72%)
Frame = +3 / +1
Query: 66 QPCQ*QSSVISTWPQGTEKLATRKTLGFRRKLCFRSSQSLRRPLEQHTQLSSLKPWSWPT 245
QPC *+SSVISTW QG EKLAT+K LGF+RKLCF S+SLRRPLE++TQLSSLKPW WPT
Sbjct: 79 QPCP*ESSVISTWLQGMEKLATQKILGFKRKLCFT*SRSLRRPLEKYTQLSSLKPWWWPT 258
Query: 246 *AAHRGLTHCXXXXXXXXXXXXIAKNTTDDMTTHNFSSS 362
*AAHRGLTHC IA+N T D T S S
Sbjct: 259 *AAHRGLTHCASSPR*LAS*LAIARNLTTDDMTARRSFS 375
Score = 133 bits (285), Expect(3) = 4e-079
Identities = 61/83 (73%), Positives = 66/83 (79%)
Frame = -1 / -3
Query: 603 F*VSFSCCDA*ECQ*TENKEWKR*TLSLGKILV*KEPGKPEI*HGGSASAASPLWFLAID 424
F + FSC A*E * +NKEW R*TLSLGKILV* EPG P I* GGSAS+ASPL FLA+D
Sbjct: 622 FLMPFSCSGA*ERH*RQNKEWNR*TLSLGKILV**EPGNPVI*QGGSASSASPLCFLAVD 443
Query: 423 LLNCWMSRKRLLKSFPGRSFRKN 355
L NCW+S KRLLKSFPGRS KN
Sbjct: 442 LWNCWISWKRLLKSFPGRSLGKN 374
Score = 124 bits (266), Expect(2) = 1e-052
Identities = 55/79 (69%), Positives = 60/79 (75%)
Frame = +1 / +2
Query: 67 SHANDNRA*SPHGHRERRN*LHEKL*DSGESYVSDQASP*GGH*SSILSSPPSNHXXXXX 246
SHA++NRA*SPHG+RE RN*LH+K *DS ESYVS +A P*GGH* SI SSPP NH
Sbjct: 80 SHAHENRA*SPHGYREWRN*LHKKF*DSRESYVSHEAGP*GGH*RSIHSSPP*NHGGGRL 259
Query: 247 XXXXXA*HTALHLRGDWHH 303
A*HTAL LRGDWHH
Sbjct: 260 RLLIGA*HTALRLRGDWHH 316
Score = 104 bits (221), Expect(4) = 3e-049
Identities = 47/61 (77%), Positives = 49/61 (80%)
Frame = -2 / -1
Query: 344 GSHVVGRVLCNGEL*CQSPRR*SAVC*APMSSLSRPRPWFEGGELSMLL*WPPQGLA*SE 165
G V +V CNGEL*CQSPRR SAVC*APMSSLSRP PWF GGEL +LL*WPPQG A E
Sbjct: 357 GHVVGRQVPCNGEL*CQSPRRRSAVC*APMSSLSRPPPWF*GGELCILL*WPPQGPASCE 178
Query: 164 T 162
T
Sbjct: 177 T 175
Score = 104 bits (221), Expect(2) = 1e-052
Identities = 49/93 (52%), Positives = 55/93 (59%)
Frame = +3 / +1
Query: 324 TTDDMTTHNFSSS*MTCREXXXXXXXXXXXXXXXRLQETTRVRQPRHCLRAISLVCQAPS 503
T D +FSSS MT E R QE+TRVRQ RHCL AIS C+ P+
Sbjct: 343 TDDMTARRSFSSSPMTFPEMTSTISSS*SSSSISRRQESTRVRQKRHCLLAISPGCRVPT 522
Query: 504 TLGSSLAKAFTFSTLCSPFTGTLRHHNN*RTLK 602
TLGSSL K FT STLCS F+G LRH +N*R K
Sbjct: 523 TLGSSLVKVFTCSTLCSAFSGALRHRSN*RASK 621
Score = 103 bits (219), Expect(2) = 5e-059
Identities = 52/75 (69%), Positives = 55/75 (73%)
Frame = +1 / +2
Query: 379 KRLQQSLPTHPAVQ*VDCKKPQG*GSRGTASVLYLWFARLLLH*DLP*RKRSPFPLFVLR 558
K LQQSLP PAV *VD KK QG*G RGTAS+LY A LLH*DLP* K SP PLFVL
Sbjct: 398 K*LQQSLPADPAVP*VDGKKAQG*GRRGTASLLYHRVAGFLLH*DLP**KCSPVPLFVLP 577
Query: 559 SLALSGITTTKGHSK 603
S+ALSG T+GH K
Sbjct: 578 SVALSGTGATEGHQK 622
Score = 79.4 bits (167), Expect(3) = 6e-065
Identities = 33/47 (70%), Positives = 36/47 (76%)
Frame = -3 / -2
Query: 571 RVPVNGEQRVEKVNAFAREDPSVEGAWQTRDIARRQCLGCLTLVVSC 431
R P+ EQRVE+VN F REDPSV G Q DIARRQCL CLTLV+SC
Sbjct: 590 RAPLKAEQRVEQVNTFTREDPSVVGTRQPGDIARRQCLFCLTLVLSC 450
Score = 77.1 bits (162), Expect(4) = 3e-049
Identities = 33/47 (70%), Positives = 34/47 (72%)
Frame = -2 / -1
Query: 491 ANQRYSTEAVPRLPHPCGFLQSTY*TAG*VGRDC*SRFPAGHSGRTE 351
A + YS EAVP LPHPC FL STY TAG GRDC*S F GH GRTE
Sbjct: 510 ATR*YSKEAVPLLPHPCAFLPSTYGTAGSAGRDC*SHFREGHWGRTE 370
Score = 45.1 bits (92), Expect(3) = 6e-065
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = -1 / -3
Query: 864 KNSFTKCW*NISTMGGGIFFVM*ISRHLFWVSFSCCEA 751
+ SF C *N T+ G I FVM*ISRH+F + FSC A
Sbjct: 706 EKSF*NCC*NSFTIDGDIVFVM*ISRHVFLMPFSCSGA 593
Score = 39.1 bits (79), Expect(4) = 3e-049
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -2 / -1
Query: 608 VIFECPLVVVMPESASERRTKSGKGE 531
+ F CP V +PESA+E RTKSG GE
Sbjct: 627 MFF*CPSVAPVPESATEGRTKSGTGE 550
Score = 33.6 bits (67), Expect(4) = 3e-049
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -1
Query: 104 PCGDHARLSLAWLQ 63
PCGDHAR S AWL+
Sbjct: 117 PCGDHARFSWAWLR 76
Score = 33.6 bits (67), Expect(3) = 4e-079
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3 / -2
Query: 877 LRRRKKLFYEVLVKHLHHGGGDIFCDVDIEAFILGVLQLL 758
L ++ ++L+K LHH CDVDI A LQLL
Sbjct: 719 LEEEGEVLLKLLLKQLHHRR*HSLCDVDI*ACFFDALQLL 600
>gb|CW186827.1|CW186827 104_605_11166770_148_36715_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11166770, DNA
sequence
Length = 742
Score = 168 bits (362), Expect(2) = 3e-072
Identities = 66/77 (85%), Positives = 70/77 (90%)
Frame = +2 / -3
Query: 344 PQLQFFLNDLPGNDFNNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPS 523
PQLQFFLNDLPGNDFNNLF LIQQF+KS AR HKGEA EALPPCYI+GLPGS+YTRIFPS
Sbjct: 353 PQLQFFLNDLPGNDFNNLFQLIQQFHKSTARKHKGEAEEALPPCYITGLPGSYYTRIFPS 174
Query: 524 ESVHLFHSLFSVHWHSQ 574
ESVHLFHSLF + W SQ
Sbjct: 173 ESVHLFHSLFCLQWRSQ 123
Score = 126 bits (269), Expect(2) = 9e-056
Identities = 57/73 (78%), Positives = 61/73 (83%)
Frame = -1 / +1
Query: 573 *ECQ*TENKEWKR*TLSLGKILV*KEPGKPEI*HGGSASAASPLWFLAIDLLNCWMSRKR 394
*E * +NKEW R*TLSLGKILV* EPG P I* GGSAS+ASPL FLA+DL NCW+S KR
Sbjct: 124 *ERH*RQNKEWNR*TLSLGKILV**EPGNPVI*QGGSASSASPLCFLAVDLWNCWISWKR 303
Query: 393 LLKSFPGRSFRKN 355
LLKSFPGRS RKN
Sbjct: 304 LLKSFPGRSLRKN 342
Score = 125 bits (268), Expect(2) = 3e-072
Identities = 52/62 (83%), Positives = 56/62 (90%)
Frame = +2 / -3
Query: 149 QEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNTLRFISEVIGIIARHCKEHD 328
QEK MF +KPVLEEATR Y+ALLP+TMVVADLGCSSGPNTLRF+SEVIGIIARHCKE D
Sbjct: 554 QEKAMFHMKPVLEEATREVYTALLPKTMVVADLGCSSGPNTLRFVSEVIGIIARHCKELD 375
Query: 329 RR 334
R
Sbjct: 374 DR 369
Score = 113 bits (241), Expect(2) = 9e-056
Identities = 52/69 (75%), Positives = 56/69 (81%)
Frame = -3 / +3
Query: 355 LKLWVVMSSVVFFAMASYDANHLGDEAQCVRPR*AA*VGHDHGLREES*VCCSSGLLKDW 176
L+ V+ S V F AMASYDANHLGDEAQCVRPR*AA*VGH HG REES V SSGLLKD
Sbjct: 348 LRRAVMSSVVKFLAMASYDANHLGDEAQCVRPR*AA*VGHHHGFREESCVYFSSGLLKDR 527
Query: 175 LDLKHNFLL 149
L +KH+FLL
Sbjct: 528 LHVKHSFLL 554
Score = 109 bits (233), Expect(3) = 2e-044
Identities = 48/56 (85%), Positives = 50/56 (89%)
Frame = -1 / +1
Query: 318 LQWRAMMPITSEMKRSVLGPDEQPKSATTMV*GRRAEYAALVASSRTGLI*NITFS 151
LQWRAMMPITSE KRSVLGPDEQPKSATTMV GRRA Y +LVASSRTG +*NI FS
Sbjct: 385 LQWRAMMPITSETKRSVLGPDEQPKSATTMVLGRRAVYTSLVASSRTGFM*NIAFS 552
Score = 104 bits (221), Expect(2) = 5e-039
Identities = 47/61 (77%), Positives = 49/61 (80%)
Frame = -2 / +2
Query: 344 GSHVVGRVLCNGEL*CQSPRR*SAVC*APMSSLSRPRPWFEGGELSMLL*WPPQGLA*SE 165
G V +V CNGEL*CQSPRR SAVC*APMSSLSRP PWF GGEL +LL*WPPQG A E
Sbjct: 359 GHVVGRQVPCNGEL*CQSPRRRSAVC*APMSSLSRPPPWF*GGELCILL*WPPQGPASCE 538
Query: 164 T 162
T
Sbjct: 539 T 541
Score = 98.2 bits (208), Expect(2) = 9e-043
Identities = 44/71 (61%), Positives = 48/71 (67%)
Frame = +3 / -1
Query: 150 RRKLCFRSSQSLRRPLEQHTQLSSLKPWSWPT*AAHRGLTHCXXXXXXXXXXXXIAKNTT 329
RRKLCF S+SLRRPLE++TQLSSLKPW WPT*AAHRGLTHC IA+N T
Sbjct: 553 RRKLCFT*SRSLRRPLEKYTQLSSLKPWWWPT*AAHRGLTHCASSPR*LAS*LAIARNLT 374
Query: 330 DDMTTHNFSSS 362
D T S S
Sbjct: 373 TDDMTARRSFS 341
Score = 97.7 bits (207), Expect(2) = 9e-043
Identities = 51/82 (62%), Positives = 57/82 (69%)
Frame = +1 / -2
Query: 379 KRLQQSLPTHPAVQ*VDCKKPQG*GSRGTASVLYLWFARLLLH*DLP*RKRSPFPLFVLR 558
K LQQSLP PAV *VD KK QG*G RGTAS+LY A LLH*DLP* K SP PLFVL
Sbjct: 318 K*LQQSLPADPAVP*VDGKKAQG*GRRGTASLLYHRVAGFLLH*DLP**KCSPVPLFVLP 139
Query: 559 SLALSGITTTKGHSKMTLYVFL 624
S+ALSG+ G + +VF+
Sbjct: 138 SVALSGMYMHAGKTMQFTHVFV 73
Score = 94.1 bits (199), Expect(2) = 9e-036
Identities = 44/85 (51%), Positives = 50/85 (58%)
Frame = +3 / -1
Query: 324 TTDDMTTHNFSSS*MTCREXXXXXXXXXXXXXXXRLQETTRVRQPRHCLRAISLVCQAPS 503
T D +FSSS MT E R QE+TRVRQ RHCL AIS C+ P+
Sbjct: 373 TDDMTARRSFSSSSMTFPEMTSTISSS*SSSSISRRQESTRVRQKRHCLLAISPGCRVPT 194
Query: 504 TLGSSLAKAFTFSTLCSPFTGTLRH 578
TLGSSL K FT STLCS F+G LR+
Sbjct: 193 TLGSSLVKVFTCSTLCSAFSGALRY 119
Score = 79.4 bits (167), Expect(2) = 5e-039
Identities = 33/47 (70%), Positives = 36/47 (76%)
Frame = -3 / +3
Query: 571 RVPVNGEQRVEKVNAFAREDPSVEGAWQTRDIARRQCLGCLTLVVSC 431
R P+ EQRVE+VN F REDPSV G Q DIARRQCL CLTLV+SC
Sbjct: 126 RAPLKAEQRVEQVNTFTREDPSVVGTRQPGDIARRQCLFCLTLVLSC 266
Score = 78.5 bits (165), Expect(2) = 9e-036
Identities = 34/52 (65%), Positives = 36/52 (69%)
Frame = +1 / -2
Query: 148 SGESYVSDQASP*GGH*SSILSSPPSNHXXXXXXXXXXA*HTALHLRGDWHH 303
+GESYVS +A P*GGH* SI SSPP NH A*HTAL LRGDWHH
Sbjct: 555 TGESYVSHEAGP*GGH*RSIHSSPP*NHGGGRLRLLIGA*HTALRLRGDWHH 400
Score = 76.7 bits (161), Expect(3) = 2e-044
Identities = 33/47 (70%), Positives = 34/47 (72%)
Frame = -2 / +2
Query: 491 ANQRYSTEAVPRLPHPCGFLQSTY*TAG*VGRDC*SRFPAGHSGRTE 351
A + YS EAVP LPHPC FL STY TAG GRDC*S F GH GRTE
Sbjct: 206 ATR*YSKEAVPLLPHPCAFLPSTYGTAGSAGRDC*SHFREGH*GRTE 346
Score = 33.6 bits (67), Expect(3) = 2e-044
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2 / +2
Query: 593 PLVVVMPESASERRTKSGKGE 531
P + +PESA+E RTKSG GE
Sbjct: 104 PACIYIPESATEGRTKSGTGE 166
>gb|CL167818.1|CL167818 104_365_10810355_116_31805_035 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10810355, DNA
sequence
Length = 573
Score = 168 bits (362), Expect(2) = 3e-072
Identities = 66/77 (85%), Positives = 70/77 (90%)
Frame = +2 / +3
Query: 344 PQLQFFLNDLPGNDFNNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPS 523
PQLQFFLNDLPGNDFNNLF LIQQF+KS AR HKGEA EALPPCYI+GLPGS+YTRIFPS
Sbjct: 255 PQLQFFLNDLPGNDFNNLFQLIQQFHKSTARKHKGEAEEALPPCYITGLPGSYYTRIFPS 434
Query: 524 ESVHLFHSLFSVHWHSQ 574
ESVHLFHSLF + W SQ
Sbjct: 435 ESVHLFHSLFCLQWRSQ 485
Score = 126 bits (269), Expect(2) = 9e-056
Identities = 57/73 (78%), Positives = 61/73 (83%)
Frame = -1 / -3
Query: 573 *ECQ*TENKEWKR*TLSLGKILV*KEPGKPEI*HGGSASAASPLWFLAIDLLNCWMSRKR 394
*E * +NKEW R*TLSLGKILV* EPG P I* GGSAS+ASPL FLA+DL NCW+S KR
Sbjct: 484 *ERH*RQNKEWNR*TLSLGKILV**EPGNPVI*QGGSASSASPLCFLAVDLWNCWISWKR 305
Query: 393 LLKSFPGRSFRKN 355
LLKSFPGRS RKN
Sbjct: 304 LLKSFPGRSLRKN 266
Score = 125 bits (268), Expect(2) = 3e-072
Identities = 52/62 (83%), Positives = 56/62 (90%)
Frame = +2 / +3
Query: 149 QEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNTLRFISEVIGIIARHCKEHD 328
QEK MF +KPVLEEATR Y+ALLP+TMVVADLGCSSGPNTLRF+SEVIGIIARHCKE D
Sbjct: 54 QEKAMFHMKPVLEEATREVYTALLPKTMVVADLGCSSGPNTLRFVSEVIGIIARHCKELD 233
Query: 329 RR 334
R
Sbjct: 234 DR 239
Score = 113 bits (241), Expect(2) = 9e-056
Identities = 52/69 (75%), Positives = 56/69 (81%)
Frame = -3 / -2
Query: 355 LKLWVVMSSVVFFAMASYDANHLGDEAQCVRPR*AA*VGHDHGLREES*VCCSSGLLKDW 176
L+ V+ S V F AMASYDANHLGDEAQCVRPR*AA*VGH HG REES V SSGLLKD
Sbjct: 260 LRRAVMSSVVKFLAMASYDANHLGDEAQCVRPR*AA*VGHHHGFREESCVYFSSGLLKDR 81
Query: 175 LDLKHNFLL 149
L +KH+FLL
Sbjct: 80 LHVKHSFLL 54
Score = 109 bits (233), Expect(3) = 2e-044
Identities = 48/56 (85%), Positives = 50/56 (89%)
Frame = -1 / -3
Query: 318 LQWRAMMPITSEMKRSVLGPDEQPKSATTMV*GRRAEYAALVASSRTGLI*NITFS 151
LQWRAMMPITSE KRSVLGPDEQPKSATTMV GRRA Y +LVASSRTG +*NI FS
Sbjct: 223 LQWRAMMPITSETKRSVLGPDEQPKSATTMVLGRRAVYTSLVASSRTGFM*NIAFS 56
Score = 104 bits (221), Expect(2) = 5e-039
Identities = 47/61 (77%), Positives = 49/61 (80%)
Frame = -2 / -1
Query: 344 GSHVVGRVLCNGEL*CQSPRR*SAVC*APMSSLSRPRPWFEGGELSMLL*WPPQGLA*SE 165
G V +V CNGEL*CQSPRR SAVC*APMSSLSRP PWF GGEL +LL*WPPQG A E
Sbjct: 249 GHVVGRQVPCNGEL*CQSPRRRSAVC*APMSSLSRPPPWF*GGELCILL*WPPQGPASCE 70
Query: 164 T 162
T
Sbjct: 69 T 67
Score = 98.2 bits (208), Expect(2) = 9e-043
Identities = 44/71 (61%), Positives = 48/71 (67%)
Frame = +3 / +1
Query: 150 RRKLCFRSSQSLRRPLEQHTQLSSLKPWSWPT*AAHRGLTHCXXXXXXXXXXXXIAKNTT 329
RRKLCF S+SLRRPLE++TQLSSLKPW WPT*AAHRGLTHC IA+N T
Sbjct: 55 RRKLCFT*SRSLRRPLEKYTQLSSLKPWWWPT*AAHRGLTHCASSPR*LAS*LAIARNLT 234
Query: 330 DDMTTHNFSSS 362
D T S S
Sbjct: 235 TDDMTARRSFS 267
Score = 97.7 bits (207), Expect(2) = 9e-043
Identities = 51/82 (62%), Positives = 57/82 (69%)
Frame = +1 / +2
Query: 379 KRLQQSLPTHPAVQ*VDCKKPQG*GSRGTASVLYLWFARLLLH*DLP*RKRSPFPLFVLR 558
K LQQSLP PAV *VD KK QG*G RGTAS+LY A LLH*DLP* K SP PLFVL
Sbjct: 290 K*LQQSLPADPAVP*VDGKKAQG*GRRGTASLLYHRVAGFLLH*DLP**KCSPVPLFVLP 469
Query: 559 SLALSGITTTKGHSKMTLYVFL 624
S+ALSG+ G + +VF+
Sbjct: 470 SVALSGMYMHAGKTMQFTHVFV 535
Score = 94.1 bits (199), Expect(2) = 9e-036
Identities = 44/85 (51%), Positives = 50/85 (58%)
Frame = +3 / +1
Query: 324 TTDDMTTHNFSSS*MTCREXXXXXXXXXXXXXXXRLQETTRVRQPRHCLRAISLVCQAPS 503
T D +FSSS MT E R QE+TRVRQ RHCL AIS C+ P+
Sbjct: 235 TDDMTARRSFSSSSMTFPEMTSTISSS*SSSSISRRQESTRVRQKRHCLLAISPGCRVPT 414
Query: 504 TLGSSLAKAFTFSTLCSPFTGTLRH 578
TLGSSL K FT STLCS F+G LR+
Sbjct: 415 TLGSSLVKVFTCSTLCSAFSGALRY 489
Score = 79.4 bits (167), Expect(2) = 5e-039
Identities = 33/47 (70%), Positives = 36/47 (76%)
Frame = -3 / -2
Query: 571 RVPVNGEQRVEKVNAFAREDPSVEGAWQTRDIARRQCLGCLTLVVSC 431
R P+ EQRVE+VN F REDPSV G Q DIARRQCL CLTLV+SC
Sbjct: 482 RAPLKAEQRVEQVNTFTREDPSVVGTRQPGDIARRQCLFCLTLVLSC 342
Score = 78.5 bits (165), Expect(2) = 9e-036
Identities = 34/52 (65%), Positives = 36/52 (69%)
Frame = +1 / +2
Query: 148 SGESYVSDQASP*GGH*SSILSSPPSNHXXXXXXXXXXA*HTALHLRGDWHH 303
+GESYVS +A P*GGH* SI SSPP NH A*HTAL LRGDWHH
Sbjct: 53 TGESYVSHEAGP*GGH*RSIHSSPP*NHGGGRLRLLIGA*HTALRLRGDWHH 208
Score = 76.7 bits (161), Expect(3) = 2e-044
Identities = 33/47 (70%), Positives = 34/47 (72%)
Frame = -2 / -1
Query: 491 ANQRYSTEAVPRLPHPCGFLQSTY*TAG*VGRDC*SRFPAGHSGRTE 351
A + YS EAVP LPHPC FL STY TAG GRDC*S F GH GRTE
Sbjct: 402 ATR*YSKEAVPLLPHPCAFLPSTYGTAGSAGRDC*SHFREGH*GRTE 262
Score = 33.6 bits (67), Expect(3) = 2e-044
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2 / -1
Query: 593 PLVVVMPESASERRTKSGKGE 531
P + +PESA+E RTKSG GE
Sbjct: 504 PACIYIPESATEGRTKSGTGE 442
>gb|CW462407.1|CW462407 fsbb001f210i19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f210i19, DNA
sequence
Length = 587
Score = 109 bits (233), Expect(3) = 3e-050
Identities = 47/62 (75%), Positives = 51/62 (82%)
Frame = +2 / +1
Query: 149 QEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNTLRFISEVIGIIARHCKEHD 328
QEK M +KP LEEATR Y+ALLP+TM ADL CSSGPNTLRF+SEVIGIIARHCKE D
Sbjct: 301 QEKAMVHMKPGLEEATREVYTALLPKTMGGADLXCSSGPNTLRFVSEVIGIIARHCKELD 480
Query: 329 RR 334
R
Sbjct: 481 DR 486
Score = 102 bits (218), Expect(3) = 2e-044
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = -3 / -3
Query: 355 LKLWVVMSSVVFFAMASYDANHLGDEAQCVRPR*AA*VGHDHGLREES*VCCSSGLLKDW 176
L+ V+ S V F AMASYDANHLGDEAQCVRPR*AA*VG HG REES V SSGLLK
Sbjct: 507 LRRAVMSSVVKFLAMASYDANHLGDEAQCVRPR*AA*VGPPHGFREESCVYFSSGLLKAR 328
Query: 175 LDLKHNFLL 149
L + H+FLL
Sbjct: 327 LHVNHSFLL 301
Score = 99.6 bits (211), Expect(3) = 3e-037
Identities = 44/57 (77%), Positives = 46/57 (80%)
Frame = -2 / -2
Query: 344 GSHVVGRVLCNGEL*CQSPRR*SAVC*APMSSLSRPRPWFEGGELSMLL*WPPQGLA 174
G V +V CNGEL*CQSPRR SAVC*APMSS SRP PWF GGEL +LL*WPPQG A
Sbjct: 496 GHVVGRQVPCNGEL*CQSPRRRSAVC*APMSSXSRPPPWF*GGELCILL*WPPQGPA 326
Score = 94.5 bits (200), Expect(2) = 4e-021
Identities = 43/56 (76%), Positives = 45/56 (80%)
Frame = -1 / -1
Query: 318 LQWRAMMPITSEMKRSVLGPDEQPKSATTMV*GRRAEYAALVASSRTGLI*NITFS 151
LQWRAMMPITSE KRSVLGPDEQ KSA MV GRRA Y +LVASSR G +* I FS
Sbjct: 470 LQWRAMMPITSETKRSVLGPDEQXKSAPPMVLGRRAVYTSLVASSRPGFM*TIAFS 303
Score = 84.9 bits (179), Expect(3) = 3e-027
Identities = 40/71 (56%), Positives = 45/71 (63%)
Frame = +3 / +2
Query: 150 RRKLCFRSSQSLRRPLEQHTQLSSLKPWSWPT*AAHRGLTHCXXXXXXXXXXXXIAKNTT 329
RRKL F S++LRRPLE++TQLSSLKPW PT AAHRGLTHC IA+N T
Sbjct: 302 RRKLWFT*SRALRRPLEKYTQLSSLKPWGGPTXAAHRGLTHCASSPR*LAS*LAIARNLT 481
Query: 330 DDMTTHNFSSS 362
D T S S
Sbjct: 482 TDDMTARRSFS 514
Score = 67.5 bits (141), Expect(3) = 2e-044
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = -3 / -1
Query: 160 NFLLNPRVFRVASFSVPCGHVEITLDCHWHGCNLQ 56
++ LNPR+F VASFS+PC HVEITLD H HGC L+
Sbjct: 128 SYYLNPRIFCVASFSIPCSHVEITLDSHGHGCELR 24
Score = 67.5 bits (141), Expect(3) = 3e-050
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = +2 / +3
Query: 59 QVAAMPMTIERDLHMATGNGETSYTKNSRIQ 151
Q+AAM M IERDLHMATGNGETSYTKNSRIQ
Sbjct: 27 QLAAMAMRIERDLHMATGNGETSYTKNSRIQ 119
Score = 66.1 bits (138), Expect(3) = 3e-050
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +2 / +1
Query: 344 PQLQFFLNDLPGNDFNNLFLLIQQFNKS 427
PQLQFFLNDLPGNDFNNLF LIQQF+KS
Sbjct: 502 PQLQFFLNDLPGNDFNNLFQLIQQFHKS 585
Score = 60.6 bits (126), Expect(3) = 3e-037
Identities = 26/31 (83%), Positives = 30/31 (96%)
Frame = -1 / -2
Query: 153 S*ILEFFV*LVSPFPVAMWRSRSIVIGMAAT 61
+*ILEFFV*LVSPFPVAMWRSRSI++ MAA+
Sbjct: 121 T*ILEFFV*LVSPFPVAMWRSRSILMAMAAS 29
Score = 53.3 bits (110), Expect(3) = 3e-027
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +1 / +2
Query: 67 SHANDNRA*SPHGHRERRN*LHEKL*DSGESYVS 168
SH ++NRA*SPHG+RE RN*LH+K *DS + +S
Sbjct: 35 SHGHENRA*SPHGYREWRN*LHKKF*DSSNNSLS 136
Score = 53.3 bits (110), Expect(3) = 2e-044
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = -1 / -1
Query: 429 IDLLNCWMSRKRLLKSFPGRSFRKN 355
+DL NCW+S KRLLKSFPGRS RKN
Sbjct: 587 VDLWNCWISWKRLLKSFPGRSLRKN 513
Score = 39.6 bits (80), Expect(3) = 3e-037
Identities = 18/26 (69%), Positives = 18/26 (69%)
Frame = -2 / -2
Query: 428 STY*TAG*VGRDC*SRFPAGHSGRTE 351
STY TAG GRDC*S GH GRTE
Sbjct: 586 STYGTAGSAGRDC*SHSREGH*GRTE 509
Score = 31.3 bits (62), Expect(2) = 4e-021
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -2 / -3
Query: 104 PCGDHARLSLAWLQ 63
PCGDHAR S WL+
Sbjct: 72 PCGDHARFSWPWLR 31
Score = 27.2 bits (53), Expect(3) = 3e-027
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 385 LQQSLPTHPAVQ*VD 429
LQQSLP PAV *VD
Sbjct: 543 LQQSLPADPAVP*VD 587
>gb|CW209767.1|CW209767 104_640_11189429_148_37429_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11189429, DNA
sequence
Length = 727
Score = 125 bits (268), Expect(3) = 7e-047
Identities = 52/62 (83%), Positives = 56/62 (90%)
Frame = +2 / -1
Query: 149 QEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNTLRFISEVIGIIARHCKEHD 328
QEK MF +KPVLEEATR Y+ALLP+TMVVADLGCSSGPNTLRF+SEVIGIIARHCKE D
Sbjct: 241 QEKAMFHMKPVLEEATREVYTALLPKTMVVADLGCSSGPNTLRFVSEVIGIIARHCKELD 62
Query: 329 RR 334
R
Sbjct: 61 DR 56
Score = 113 bits (241), Expect(3) = 2e-038
Identities = 52/69 (75%), Positives = 56/69 (81%)
Frame = -3 / +2
Query: 355 LKLWVVMSSVVFFAMASYDANHLGDEAQCVRPR*AA*VGHDHGLREES*VCCSSGLLKDW 176
L+ V+ S V F AMASYDANHLGDEAQCVRPR*AA*VGH HG REES V SSGLLKD
Sbjct: 35 LRRAVMSSVVKFLAMASYDANHLGDEAQCVRPR*AA*VGHHHGFREESCVYFSSGLLKDR 214
Query: 175 LDLKHNFLL 149
L +KH+FLL
Sbjct: 215 LHVKHSFLL 241
Score = 109 bits (233), Expect(2) = 5e-035
Identities = 48/56 (85%), Positives = 50/56 (89%)
Frame = -1 / +3
Query: 318 LQWRAMMPITSEMKRSVLGPDEQPKSATTMV*GRRAEYAALVASSRTGLI*NITFS 151
LQWRAMMPITSE KRSVLGPDEQPKSATTMV GRRA Y +LVASSRTG +*NI FS
Sbjct: 72 LQWRAMMPITSETKRSVLGPDEQPKSATTMVLGRRAVYTSLVASSRTGFM*NIAFS 239
Score = 104 bits (221), Expect(2) = 1e-024
Identities = 47/61 (77%), Positives = 49/61 (80%)
Frame = -2 / +1
Query: 344 GSHVVGRVLCNGEL*CQSPRR*SAVC*APMSSLSRPRPWFEGGELSMLL*WPPQGLA*SE 165
G V +V CNGEL*CQSPRR SAVC*APMSSLSRP PWF GGEL +LL*WPPQG A E
Sbjct: 46 GHVVGRQVPCNGEL*CQSPRRRSAVC*APMSSLSRPPPWF*GGELCILL*WPPQGPASCE 225
Query: 164 T 162
T
Sbjct: 226 T 228
Score = 98.2 bits (208), Expect(2) = 3e-029
Identities = 44/71 (61%), Positives = 48/71 (67%)
Frame = +3 / -2
Query: 150 RRKLCFRSSQSLRRPLEQHTQLSSLKPWSWPT*AAHRGLTHCXXXXXXXXXXXXIAKNTT 329
RRKLCF S+SLRRPLE++TQLSSLKPW WPT*AAHRGLTHC IA+N T
Sbjct: 240 RRKLCFT*SRSLRRPLEKYTQLSSLKPWWWPT*AAHRGLTHCASSPR*LAS*LAIARNLT 61
Query: 330 DDMTTHNFSSS 362
D T S S
Sbjct: 60 TDDMTARRSFS 28
Score = 78.5 bits (165), Expect(2) = 5e-023
Identities = 34/52 (65%), Positives = 36/52 (69%)
Frame = +1 / -3
Query: 148 SGESYVSDQASP*GGH*SSILSSPPSNHXXXXXXXXXXA*HTALHLRGDWHH 303
+GESYVS +A P*GGH* SI SSPP NH A*HTAL LRGDWHH
Sbjct: 242 TGESYVSHEAGP*GGH*RSIHSSPP*NHGGGRLRLLIGA*HTALRLRGDWHH 87
Score = 71.2 bits (149), Expect(3) = 7e-047
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2 / -3
Query: 59 QVAAMPMTIERDLHMATGNGETSYTKNSRIQ 151
Q+AAMPM IERDLHMATGNGETSYTKNSRIQ
Sbjct: 515 QLAAMPMRIERDLHMATGNGETSYTKNSRIQ 423
Score = 67.5 bits (141), Expect(3) = 2e-038
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = -3 / +3
Query: 160 NFLLNPRVFRVASFSVPCGHVEITLDCHWHGCNLQ 56
++ LNPR+F VASFS+PC HVEITLD H HGC L+
Sbjct: 414 SYYLNPRIFCVASFSIPCSHVEITLDSHGHGCELR 518
Score = 63.4 bits (132), Expect(2) = 5e-035
Identities = 27/31 (87%), Positives = 31/31 (100%)
Frame = -1 / +1
Query: 153 S*ILEFFV*LVSPFPVAMWRSRSIVIGMAAT 61
+*ILEFFV*LVSPFPVAMWRSRSI++GMAA+
Sbjct: 421 T*ILEFFV*LVSPFPVAMWRSRSILMGMAAS 513
Score = 55.1 bits (114), Expect(2) = 3e-029
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +1 / -2
Query: 67 SHANDNRA*SPHGHRERRN*LHEKL*DSGESYVS 168
SHA++NRA*SPHG+RE RN*LH+K *DS + +S
Sbjct: 507 SHAHENRA*SPHGYREWRN*LHKKF*DSSNNSLS 406
Score = 54.2 bits (112), Expect(2) = 5e-023
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +3 / -1
Query: 66 QPCQ*QSSVISTWPQGTEKLATRKTLGFR 152
QPC *+SSVISTW QG EKLAT+K LGF+
Sbjct: 508 QPCP*ESSVISTWLQGMEKLATQKILGFK 422
Score = 35.9 bits (72), Expect(3) = 7e-047
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2 / -1
Query: 344 PQLQFFLNDLPGN 382
PQLQFFLNDLPGN
Sbjct: 40 PQLQFFLNDLPGN 2
Score = 33.6 bits (67), Expect(2) = 1e-024
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +2
Query: 104 PCGDHARLSLAWLQ 63
PCGDHAR S AWL+
Sbjct: 470 PCGDHARFSWAWLR 511
Score = 23.1 bits (44), Expect(3) = 2e-038
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / +3
Query: 381 FPGRSFRKN 355
FPGRS RKN
Sbjct: 3 FPGRSLRKN 29
>gb|CD211984.1|CD211984 HS1_67_B09.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_67_B09_A012 5', mRNA sequence
Length = 681
Score = 72.5 bits (152), Expect(4) = 5e-043
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +2 / +2
Query: 449 EAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWHSQASQQL 589
+ +ALPP Y++GLPGSFYTR+FP VHLFHS + + W S+ +L
Sbjct: 482 DKGDALPPYYVAGLPGSFYTRLFPDRCVHLFHSSYCLMWRSKVPDEL 622
Score = 66.1 bits (138), Expect(4) = 5e-043
Identities = 26/53 (49%), Positives = 39/53 (73%)
Frame = +2 / +2
Query: 62 VAAMPMTIERDLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALL 220
+A + M +ERDLHM+ G+GE SY NSR+QEK + + +PVL +A AA+++ L
Sbjct: 92 LAKVAMKVERDLHMSRGDGEDSYASNSRLQEKSILKTRPVLHKAVAAAHASSL 250
Score = 51.0 bits (105), Expect(4) = 5e-043
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +2 / +2
Query: 230 MVVADLGCSSGPNTLRFISEVIGIIA 307
MVVADLGCSSGPNTL +SEV+G +A
Sbjct: 269 MVVADLGCSSGPNTLLVVSEVLGAVA 346
Score = 44.6 bits (91), Expect(4) = 2e-022
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -1 / -1
Query: 306 AMMPITSEMKRSVLGPDEQPKSATTM 229
A P TSE SVLGPDEQP+SATTM
Sbjct: 345 ATAPSTSETTSSVLGPDEQPRSATTM 268
Score = 43.2 bits (88), Expect(4) = 5e-043
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2 / +2
Query: 350 LQFFLNDLPGNDFNNLFLLIQQFNK 424
+QFFLNDLPGNDFN +F ++ F K
Sbjct: 395 VQFFLNDLPGNDFNLVFQSLELFKK 469
Score = 42.8 bits (87), Expect(4) = 2e-022
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = -1 / -1
Query: 549 KEWKR*TLSLGKILV*KEPGKPEI*HGGSASAAS 448
+EWKR T G V*KEPG P *+GGSAS S
Sbjct: 582 EEWKRWTQRSGNSRV*KEPGSPAT*YGGSASPLS 481
Score = 42.3 bits (86), Expect(4) = 2e-022
Identities = 23/48 (47%), Positives = 28/48 (58%)
Frame = -1 / -1
Query: 204 AALVASSRTGLI*NITFS*ILEFFV*LVSPFPVAMWRSRSIVIGMAAT 61
AA A TGL+ ++ FS* LE *L SP P MWRSRS + A+
Sbjct: 234 AAATALWSTGLVFSMDFS*SLELEA*LSSPSPRLMWRSRSTFMATLAS 91
Score = 32.7 bits (65), Expect(4) = 2e-022
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -1 / -1
Query: 435 LAIDLLNCWMSRKRLLKSFPGRSFRKN 355
L LN LKSFPGRSFRKN
Sbjct: 480 LTASFLNSSRDWNTRLKSFPGRSFRKN 400
>gb|CL182327.1|CL182327 104_393_10897349_148_31921_341 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10897349, DNA
sequence
Length = 665
Score = 68.0 bits (142), Expect(4) = 1e-041
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +2 / +3
Query: 449 EAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHW 565
+ +ALPP Y++GLPGSFYTR+FP VHLFHS + + W
Sbjct: 546 DKGDALPPYYVAGLPGSFYTRLFPDRCVHLFHSSYCLMW 662
Score = 66.1 bits (138), Expect(4) = 1e-041
Identities = 26/53 (49%), Positives = 39/53 (73%)
Frame = +2 / +3
Query: 62 VAAMPMTIERDLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALL 220
+A + M +ERDLHM+ G+GE SY NSR+QEK + + +PVL +A AA+++ L
Sbjct: 156 LAKVAMKVERDLHMSRGDGEDSYASNSRLQEKSILKTRPVLHKAVAAAHASSL 314
Score = 51.0 bits (105), Expect(4) = 1e-041
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +2 / +3
Query: 230 MVVADLGCSSGPNTLRFISEVIGIIA 307
MVVADLGCSSGPNTL +SEV+G +A
Sbjct: 333 MVVADLGCSSGPNTLLVVSEVLGAVA 410
Score = 44.6 bits (91), Expect(4) = 2e-022
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -1 / -2
Query: 306 AMMPITSEMKRSVLGPDEQPKSATTM 229
A P TSE SVLGPDEQP+SATTM
Sbjct: 409 ATAPSTSETTSSVLGPDEQPRSATTM 332
Score = 43.2 bits (88), Expect(4) = 1e-041
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2 / +3
Query: 350 LQFFLNDLPGNDFNNLFLLIQQFNK 424
+QFFLNDLPGNDFN +F ++ F K
Sbjct: 459 VQFFLNDLPGNDFNLVFQSLELFKK 533
Score = 42.8 bits (87), Expect(4) = 2e-022
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = -1 / -2
Query: 549 KEWKR*TLSLGKILV*KEPGKPEI*HGGSASAAS 448
+EWKR T G V*KEPG P *+GGSAS S
Sbjct: 646 EEWKRWTQRSGNSRV*KEPGSPAT*YGGSASPLS 545
Score = 42.3 bits (86), Expect(4) = 2e-022
Identities = 23/48 (47%), Positives = 28/48 (58%)
Frame = -1 / -2
Query: 204 AALVASSRTGLI*NITFS*ILEFFV*LVSPFPVAMWRSRSIVIGMAAT 61
AA A TGL+ ++ FS* LE *L SP P MWRSRS + A+
Sbjct: 298 AAATALWSTGLVFSMDFS*SLELEA*LSSPSPRLMWRSRSTFMATLAS 155
Score = 32.7 bits (65), Expect(4) = 2e-022
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -1 / -2
Query: 435 LAIDLLNCWMSRKRLLKSFPGRSFRKN 355
L LN LKSFPGRSFRKN
Sbjct: 544 LTASFLNSSRDWNTRLKSFPGRSFRKN 464
>gb|CN141588.1|CN141588 OX1_52_D05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_52_D05_A002 5', mRNA sequence
Length = 759
Score = 105 bits (224), Expect(3) = 6e-039
Identities = 42/81 (51%), Positives = 54/81 (66%)
Frame = +2 / +1
Query: 77 MTIERDLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCS 256
+ I D HMA G GE SY+KNSR E + KPV+E A + Y+ LLP+TM++ DL C+
Sbjct: 58 INIRYDFHMADGEGEWSYSKNSRRPEIYFRETKPVVENAIKEVYTTLLPKTMIIGDLACA 237
Query: 257 SGPNTLRFISEVIGIIARHCK 319
+GPNTL F+S VI I HCK
Sbjct: 238 AGPNTLLFMSSVISTIVEHCK 300
Score = 72.5 bits (152), Expect(3) = 6e-039
Identities = 31/72 (43%), Positives = 41/72 (56%)
Frame = +2 / +1
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE A P YI GLP S+Y R+FP ESVH+FHS + +HW
Sbjct: 355 NDFNELFRLIEKFTRPNITGERAHLPPFYYIQGLPESYYNRLFPRESVHIFHSSYGLHWR 534
Query: 569 SQASQQLKDTQK 604
SQ + L+ +K
Sbjct: 535 SQELEGLESWRK 570
Score = 28.1 bits (55), Expect(3) = 6e-039
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2 / +1
Query: 791 DIYITKNIPPPMVEMFHQHFVKEF 862
+IYITK P +V+ F + F K+F
Sbjct: 589 NIYITKTTTPFVVKQFRKLFYKDF 660
>gb|CD428545.1|CD428545 ETH1_27_H10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_27_H10_A002 5', mRNA sequence
Length = 730
Score = 105 bits (224), Expect(3) = 1e-038
Identities = 42/81 (51%), Positives = 54/81 (66%)
Frame = +2 / +3
Query: 77 MTIERDLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCS 256
+ I D HMA G GE SY+KNSR E + KPV+E A + Y+ LLP+TM++ DL C+
Sbjct: 57 INIRYDFHMADGEGEWSYSKNSRRPEIYFRETKPVVENAIKEVYTTLLPKTMIIGDLACA 236
Query: 257 SGPNTLRFISEVIGIIARHCK 319
+GPNTL F+S VI I HCK
Sbjct: 237 AGPNTLLFMSSVISTIVEHCK 299
Score = 71.6 bits (150), Expect(3) = 1e-038
Identities = 31/72 (43%), Positives = 41/72 (56%)
Frame = +2 / +3
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE A P YI GLP S+Y R+FP ESVH+FHS + +HW
Sbjct: 354 NDFNELFRLIEKFRRPNITGERAHLPPFYYIQGLPESYYNRLFPRESVHIFHSSYGLHWR 533
Query: 569 SQASQQLKDTQK 604
SQ + L+ +K
Sbjct: 534 SQELEGLESWRK 569
Score = 28.1 bits (55), Expect(3) = 1e-038
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2 / +3
Query: 791 DIYITKNIPPPMVEMFHQHFVKEF 862
+IYITK P +V+ F + F K+F
Sbjct: 588 NIYITKTTTPFVVKQFQKLFYKDF 659
>gb|CD428471.1|CD428471 ETH1_31_F12.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_31_F12_A002 5', mRNA sequence
Length = 754
Score = 105 bits (224), Expect(3) = 1e-038
Identities = 42/81 (51%), Positives = 54/81 (66%)
Frame = +2 / +3
Query: 77 MTIERDLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCS 256
+ I D HMA G GE SY+KNSR E + KPV+E A + Y+ LLP+TM++ DL C+
Sbjct: 81 INIRYDFHMADGEGEWSYSKNSRRPEIYFRETKPVVENAIKEVYTTLLPKTMIIGDLACA 260
Query: 257 SGPNTLRFISEVIGIIARHCK 319
+GPNTL F+S VI I HCK
Sbjct: 261 AGPNTLLFMSSVISTIVEHCK 323
Score = 71.6 bits (150), Expect(3) = 1e-038
Identities = 31/72 (43%), Positives = 41/72 (56%)
Frame = +2 / +3
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE A P YI GLP S+Y R+FP ESVH+FHS + +HW
Sbjct: 378 NDFNELFRLIEKFRRPNITGERAHLPPFYYIQGLPESYYNRLFPRESVHIFHSSYGLHWR 557
Query: 569 SQASQQLKDTQK 604
SQ + L+ +K
Sbjct: 558 SQELEGLESWRK 593
Score = 28.1 bits (55), Expect(3) = 1e-038
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2 / +3
Query: 791 DIYITKNIPPPMVEMFHQHFVKEF 862
+IYITK P +V+ F + F K+F
Sbjct: 612 NIYITKTTTPFVVKQFQKLFYKDF 683
>gb|CN134682.1|CN134682 OX1_27_G04.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_G04_A002 5', mRNA sequence
Length = 793
Score = 106 bits (227), Expect(3) = 1e-038
Identities = 42/76 (55%), Positives = 53/76 (69%)
Frame = +2 / +1
Query: 92 DLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNT 271
D HM G GE SY+KNSR QE + +P++E A + Y+ LLP+TM++AD GCSSGPNT
Sbjct: 61 DFHMTEGEGEWSYSKNSRRQEIFFLETRPMIENAIKEVYTTLLPKTMIIADPGCSSGPNT 240
Query: 272 LRFISEVIGIIARHCK 319
+ FIS VI II CK
Sbjct: 241 MLFISSVINIIVEKCK 288
Score = 70.3 bits (147), Expect(3) = 1e-038
Identities = 31/72 (43%), Positives = 40/72 (55%)
Frame = +2 / +1
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE P YI GLP S+Y R+FP ESVHLFHS + +HW
Sbjct: 343 NDFNELFRSIEKFKRPNTTGEREHLPPLYYIMGLPESYYKRLFPRESVHLFHSSYCLHWR 522
Query: 569 SQASQQLKDTQK 604
SQ + L+ +K
Sbjct: 523 SQEPEGLEAWRK 558
Score = 28.1 bits (55), Expect(3) = 1e-038
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2 / +1
Query: 791 DIYITKNIPPPMVEMFHQHFVKEF 862
+IYITK P +V+ F + F K+F
Sbjct: 577 NIYITKTTTPFVVKQFQKLFYKDF 648
>gb|CX613827.1|CX613827 GABR1_10_A04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_10_A04_A002 5', mRNA sequence
Length = 803
Score = 105 bits (224), Expect(3) = 1e-038
Identities = 42/81 (51%), Positives = 54/81 (66%)
Frame = +2 / +1
Query: 77 MTIERDLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCS 256
+ I D HMA G GE SY+KNSR E + KPV+E A + Y+ LLP+TM++ DL C+
Sbjct: 58 INIRYDFHMADGEGEWSYSKNSRRPEIYFRETKPVVENAIKEVYTTLLPKTMIIGDLACA 237
Query: 257 SGPNTLRFISEVIGIIARHCK 319
+GPNTL F+S VI I HCK
Sbjct: 238 AGPNTLLFMSSVISTIVEHCK 300
Score = 71.6 bits (150), Expect(3) = 1e-038
Identities = 31/72 (43%), Positives = 41/72 (56%)
Frame = +2 / +1
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE A P YI GLP S+Y R+FP ESVH+FHS + +HW
Sbjct: 355 NDFNELFRLIEKFRRPNITGERAHLPPFYYIQGLPESYYNRLFPRESVHIFHSSYGLHWR 534
Query: 569 SQASQQLKDTQK 604
SQ + L+ +K
Sbjct: 535 SQELEGLESWRK 570
Score = 28.1 bits (55), Expect(3) = 1e-038
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2 / +1
Query: 791 DIYITKNIPPPMVEMFHQHFVKEF 862
+IYITK P +V+ F + F K+F
Sbjct: 589 NIYITKTTTPFVVKQFQKLFYKDF 660
>gb|CN144511.1|CN144511 WOUND1_22_G08.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_22_G08_A002 5', mRNA sequence
Length = 824
Score = 105 bits (224), Expect(3) = 1e-038
Identities = 42/81 (51%), Positives = 54/81 (66%)
Frame = +2 / +1
Query: 77 MTIERDLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCS 256
+ I D HMA G GE SY+KNSR E + KPV+E A + Y+ LLP+TM++ DL C+
Sbjct: 64 INIRYDFHMADGEGEWSYSKNSRRPEIYFRETKPVVENAIKEVYTTLLPKTMIIGDLACA 243
Query: 257 SGPNTLRFISEVIGIIARHCK 319
+GPNTL F+S VI I HCK
Sbjct: 244 AGPNTLLFMSSVISTIVEHCK 306
Score = 71.6 bits (150), Expect(3) = 1e-038
Identities = 31/72 (43%), Positives = 41/72 (56%)
Frame = +2 / +1
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE A P YI GLP S+Y R+FP ESVH+FHS + +HW
Sbjct: 361 NDFNELFRLIEKFRRPNITGERAHLPPFYYIQGLPESYYNRLFPRESVHIFHSSYGLHWR 540
Query: 569 SQASQQLKDTQK 604
SQ + L+ +K
Sbjct: 541 SQELEGLESWRK 576
Score = 28.1 bits (55), Expect(3) = 1e-038
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2 / +1
Query: 791 DIYITKNIPPPMVEMFHQHFVKEF 862
+IYITK P +V+ F + F K+F
Sbjct: 595 NIYITKTTTPFVVKQFQKLFYKDF 666
>gb|CL698595.2|CL698595 SP__Ba0032E06.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0032E06 3', DNA sequence
Length = 659
Score = 108 bits (230), Expect(3) = 2e-038
Identities = 47/80 (58%), Positives = 56/80 (70%)
Frame = +2 / +1
Query: 161 MFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNTLRFISEVIGIIARHCKEHDRRHD 340
M Q P++E+A + AL+P+TMV+ADLGCSSGPNTL FIS VI IIA + D
Sbjct: 1 MVQTTPIVEDAIKEVCPALVPKTMVIADLGCSSGPNTLLFISNVINIIAGQYNKSIGECD 180
Query: 341 YPQLQFFLNDLPGNDFNNLF 400
+LQ FLNDLPGNDFN LF
Sbjct: 181 PVELQIFLNDLPGNDFNQLF 240
Score = 66.1 bits (138), Expect(3) = 2e-038
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = +2 / +1
Query: 467 PPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWHSQASQQLKDTQK*LCM 616
P YISGLP S+Y R+FP SVHLFHS +HW SQ + + LCM
Sbjct: 298 PLYYISGLPKSYYNRLFPRRSVHLFHSACCLHWRSQVFLSMLTARSYLCM 447
Score = 29.5 bits (58), Expect(3) = 2e-038
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2 / +2
Query: 791 DIYITKNIPPPMVEMFHQHFVKEF 862
+IYITK P +V+ F + F K+F
Sbjct: 572 NIYITKITPSSVVKCFQEQFYKDF 643
>gb|BM323183.1|BM323183 PIC1_16_C08.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 627
Score = 110 bits (234), Expect(2) = 8e-038
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +2 / +3
Query: 92 DLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNT 271
D HM G GE SY+KNSR QE + +P++E A + Y+ LLP+TM++ADLGCSSGPNT
Sbjct: 48 DFHMTEGEGEWSYSKNSRRQEIFFLETRPMIENAIKEVYTTLLPKTMIIADLGCSSGPNT 227
Query: 272 LRFISEVIGIIARHCK 319
+ FIS VI II CK
Sbjct: 228 MLFISSVINIIVEKCK 275
Score = 69.3 bits (145), Expect(2) = 8e-038
Identities = 30/68 (44%), Positives = 38/68 (55%)
Frame = +2 / +3
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE P YI GLP S+Y R+FP ESVHLFHS + +HW
Sbjct: 330 NDFNELFRSIEKFKRPNTTGEREHLPPLYYIMGLPESYYKRLFPRESVHLFHSSYCLHWR 509
Query: 569 SQASQQLK 592
SQ + L+
Sbjct: 510 SQEPEGLE 533
>gb|BM325945.1|BM325945 PIC1_54_G06.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 535
Score = 110 bits (234), Expect(2) = 2e-037
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +2 / +1
Query: 92 DLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNT 271
D HM G GE SY+KNSR QE + +P++E A + Y+ LLP+TM++ADLGCSSGPNT
Sbjct: 64 DFHMTEGEGEWSYSKNSRRQEIFFLETRPMIENAIKEVYTTLLPKTMIIADLGCSSGPNT 243
Query: 272 LRFISEVIGIIARHCK 319
+ FIS VI II CK
Sbjct: 244 MLFISSVINIIVEKCK 291
Score = 68.0 bits (142), Expect(2) = 2e-037
Identities = 29/62 (46%), Positives = 35/62 (56%)
Frame = +2 / +1
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE P YI GLP S+Y R+FP ESVHLFHS + +HW
Sbjct: 346 NDFNELFRSIEKFKRPNTTGEREHLPPLYYIMGLPESYYKRLFPRESVHLFHSSYCLHWR 525
Query: 569 SQ 574
SQ
Sbjct: 526 SQ 531
>gb|BM324556.1|BM324556 PIC1_32_G01.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 532
Score = 110 bits (234), Expect(2) = 2e-037
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +2 / +2
Query: 92 DLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNT 271
D HM G GE SY+KNSR QE + +P++E A + Y+ LLP+TM++ADLGCSSGPNT
Sbjct: 59 DFHMTEGEGEWSYSKNSRRQEIFFLETRPMIENAIKEVYTTLLPKTMIIADLGCSSGPNT 238
Query: 272 LRFISEVIGIIARHCK 319
+ FIS VI II CK
Sbjct: 239 MLFISSVINIIVEKCK 286
Score = 68.0 bits (142), Expect(2) = 2e-037
Identities = 29/62 (46%), Positives = 35/62 (56%)
Frame = +2 / +2
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE P YI GLP S+Y R+FP ESVHLFHS + +HW
Sbjct: 341 NDFNELFRSIEKFKRPNTTGEREHLPPLYYIMGLPESYYKRLFPRESVHLFHSSYCLHWR 520
Query: 569 SQ 574
SQ
Sbjct: 521 SQ 526
>gb|BE599170.1|BE599170 PI1_86_C05.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 530
Score = 110 bits (234), Expect(2) = 2e-037
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +2 / +1
Query: 92 DLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNT 271
D HM G GE SY+KNSR QE + +P++E A + Y+ LLP+TM++ADLGCSSGPNT
Sbjct: 55 DFHMTEGEGEWSYSKNSRRQEIFFLETRPMIENAIKEVYTTLLPKTMIIADLGCSSGPNT 234
Query: 272 LRFISEVIGIIARHCK 319
+ FIS VI II CK
Sbjct: 235 MLFISSVINIIVEKCK 282
Score = 68.0 bits (142), Expect(2) = 2e-037
Identities = 29/62 (46%), Positives = 35/62 (56%)
Frame = +2 / +1
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE P YI GLP S+Y R+FP ESVHLFHS + +HW
Sbjct: 337 NDFNELFRSIEKFKRPNTTGEREHLPPLYYIMGLPESYYKRLFPRESVHLFHSSYCLHWR 516
Query: 569 SQ 574
SQ
Sbjct: 517 SQ 522
>gb|BM322891.1|BM322891 PIC1_14_F07.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 529
Score = 110 bits (234), Expect(2) = 2e-037
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +2 / +1
Query: 92 DLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNT 271
D HM G GE SY+KNSR QE + +P++E A + Y+ LLP+TM++ADLGCSSGPNT
Sbjct: 58 DFHMTEGEGEWSYSKNSRRQEIFFLETRPMIENAIKEVYTTLLPKTMIIADLGCSSGPNT 237
Query: 272 LRFISEVIGIIARHCK 319
+ FIS VI II CK
Sbjct: 238 MLFISSVINIIVEKCK 285
Score = 68.0 bits (142), Expect(2) = 2e-037
Identities = 29/62 (46%), Positives = 35/62 (56%)
Frame = +2 / +1
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE P YI GLP S+Y R+FP ESVHLFHS + +HW
Sbjct: 340 NDFNELFRSIEKFKRPNTTGEREHLPPLYYIMGLPESYYKRLFPRESVHLFHSSYCLHWR 519
Query: 569 SQ 574
SQ
Sbjct: 520 SQ 525
>gb|BM325147.1|BM325147 PIC1_40_C04.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 531
Score = 110 bits (234), Expect(2) = 2e-037
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +2 / +2
Query: 92 DLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNT 271
D HM G GE SY+KNSR QE + +P++E A + Y+ LLP+TM++ADLGCSSGPNT
Sbjct: 59 DFHMTEGEGEWSYSKNSRRQEIFFLETRPMIENAIKEVYTTLLPKTMIIADLGCSSGPNT 238
Query: 272 LRFISEVIGIIARHCK 319
+ FIS VI II CK
Sbjct: 239 MLFISSVINIIVEKCK 286
Score = 68.0 bits (142), Expect(2) = 2e-037
Identities = 29/62 (46%), Positives = 35/62 (56%)
Frame = +2 / +2
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE P YI GLP S+Y R+FP ESVHLFHS + +HW
Sbjct: 341 NDFNELFRSIEKFKRPNTTGEREHLPPLYYIMGLPESYYKRLFPRESVHLFHSSYCLHWR 520
Query: 569 SQ 574
SQ
Sbjct: 521 SQ 526
>gb|BM325840.1|BM325840 PIC1_53_E01.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 531
Score = 110 bits (234), Expect(2) = 2e-037
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +2 / +2
Query: 92 DLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNT 271
D HM G GE SY+KNSR QE + +P++E A + Y+ LLP+TM++ADLGCSSGPNT
Sbjct: 59 DFHMTEGEGEWSYSKNSRRQEIFFLETRPMIENAIKEVYTTLLPKTMIIADLGCSSGPNT 238
Query: 272 LRFISEVIGIIARHCK 319
+ FIS VI II CK
Sbjct: 239 MLFISSVINIIVEKCK 286
Score = 68.0 bits (142), Expect(2) = 2e-037
Identities = 29/62 (46%), Positives = 35/62 (56%)
Frame = +2 / +2
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE P YI GLP S+Y R+FP ESVHLFHS + +HW
Sbjct: 341 NDFNELFRSIEKFKRPNTTGEREHLPPLYYIMGLPESYYKRLFPRESVHLFHSSYCLHWR 520
Query: 569 SQ 574
SQ
Sbjct: 521 SQ 526
>gb|CD235156.1|CD235156 SS1_21_C09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_21_C09_A012 5', mRNA sequence
Length = 621
Score = 103 bits (219), Expect(2) = 1e-036
Identities = 42/81 (51%), Positives = 52/81 (64%)
Frame = +2 / +3
Query: 77 MTIERDLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCS 256
M I D HMA G GE SY+KNSR E + KPV+E A + Y LLP+TM++ DL C+
Sbjct: 78 MNIRYDFHMAEGEGEWSYSKNSRRPEIYFRETKPVVENAIKEVYKTLLPKTMIIGDLACA 257
Query: 257 SGPNTLRFISEVIGIIARHCK 319
+GPNTL F+S VI I CK
Sbjct: 258 AGPNTLLFMSSVISTIVEQCK 320
Score = 72.5 bits (152), Expect(2) = 1e-036
Identities = 31/72 (43%), Positives = 41/72 (56%)
Frame = +2 / +3
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE A P YI GLP S+Y R+FP ESVH+FHS + +HW
Sbjct: 375 NDFNELFRLIEKFRRPNITGERAHLPPFYYIQGLPESYYNRLFPRESVHIFHSSYGLHWR 554
Query: 569 SQASQQLKDTQK 604
SQ + L+ +K
Sbjct: 555 SQEPEGLESWEK 590
>gb|CD463447.1|CD463447 ETH1_44_D02.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_44_D02_A002 5', mRNA sequence
Length = 592
Score = 105 bits (224), Expect(2) = 1e-036
Identities = 42/81 (51%), Positives = 54/81 (66%)
Frame = +2 / +2
Query: 77 MTIERDLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCS 256
+ I D HMA G GE SY+KNSR E + KPV+E A + Y+ LLP+TM++ DL C+
Sbjct: 86 INIRYDFHMADGEGEWSYSKNSRRPEIYFRETKPVVENAIKEVYTTLLPKTMIIGDLACA 265
Query: 257 SGPNTLRFISEVIGIIARHCK 319
+GPNTL F+S VI I HCK
Sbjct: 266 AGPNTLLFMSSVISTIVEHCK 328
Score = 70.3 bits (147), Expect(2) = 1e-036
Identities = 30/68 (44%), Positives = 39/68 (57%)
Frame = +2 / +2
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE A P YI GLP S+Y R+FP ESVH+FHS + +HW
Sbjct: 383 NDFNELFRLIEKFRGPNITGERAHLPPFYYIQGLPESYYNRLFPRESVHIFHSSYGLHWR 562
Query: 569 SQASQQLK 592
SQ + L+
Sbjct: 563 SQELEGLE 586
>gb|BM324821.1|BM324821 PIC1_36_B07.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 561
Score = 105 bits (224), Expect(2) = 1e-036
Identities = 42/81 (51%), Positives = 54/81 (66%)
Frame = +2 / +1
Query: 77 MTIERDLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCS 256
+ I D HMA G GE SY+KNSR E + KPV+E A + Y+ LLP+TM++ DL C+
Sbjct: 61 INIRYDFHMADGEGEWSYSKNSRRPEIYFRETKPVVENAIKEVYTTLLPKTMIIGDLACA 240
Query: 257 SGPNTLRFISEVIGIIARHCK 319
+GPNTL F+S VI I HCK
Sbjct: 241 AGPNTLLFMSSVISTIVEHCK 303
Score = 69.8 bits (146), Expect(2) = 1e-036
Identities = 30/68 (44%), Positives = 39/68 (57%)
Frame = +2 / +1
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE A P YI GLP S+Y R+FP ESVH+FHS + +HW
Sbjct: 358 NDFNELFRLIEKFRRPNITGERAHLPPFYYIQGLPESYYNRLFPRESVHIFHSSYGLHWR 537
Query: 569 SQASQQLK 592
SQ + L+
Sbjct: 538 SQELEGLE 561
>gb|BM323962.1|BM323962 PIC1_29_G01.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 529
Score = 110 bits (234), Expect(2) = 3e-036
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +2 / +3
Query: 92 DLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNT 271
D HM G GE SY+KNSR QE + +P++E A + Y+ LLP+TM++ADLGCSSGPNT
Sbjct: 66 DFHMTEGEGEWSYSKNSRRQEIFFLETRPMIENAIKEVYTTLLPKTMIIADLGCSSGPNT 245
Query: 272 LRFISEVIGIIARHCK 319
+ FIS VI II CK
Sbjct: 246 MLFISSVINIIVEKCK 293
Score = 63.8 bits (133), Expect(2) = 3e-036
Identities = 27/59 (45%), Positives = 33/59 (55%)
Frame = +2 / +3
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHW 565
N+ L + K N GE P YI GLP S+Y R+FP ESVHLFHS + +HW
Sbjct: 348 NDFNELFRSIEKFKRPNTTGEREHLPPLYYIMGLPESYYKRLFPRESVHLFHSSYCLHW 524
>gb|BM323153.1|BM323153 PIC1_8_A04.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 528
Score = 110 bits (234), Expect(2) = 3e-036
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +2 / +3
Query: 92 DLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNT 271
D HM G GE SY+KNSR QE + +P++E A + Y+ LLP+TM++ADLGCSSGPNT
Sbjct: 66 DFHMTEGEGEWSYSKNSRRQEIFFLETRPMIENAIKEVYTTLLPKTMIIADLGCSSGPNT 245
Query: 272 LRFISEVIGIIARHCK 319
+ FIS VI II CK
Sbjct: 246 MLFISSVINIIVEKCK 293
Score = 63.8 bits (133), Expect(2) = 3e-036
Identities = 27/59 (45%), Positives = 33/59 (55%)
Frame = +2 / +3
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHW 565
N+ L + K N GE P YI GLP S+Y R+FP ESVHLFHS + +HW
Sbjct: 348 NDFNELFRSIEKFKRPNTTGEREHLPPLYYIMGLPESYYKRLFPRESVHLFHSSYCLHW 524
>gb|CD462463.1|CD462463 ETH1_37_D09.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_37_D09_A002 5', mRNA sequence
Length = 663
Score = 101 bits (215), Expect(2) = 6e-036
Identities = 41/81 (50%), Positives = 53/81 (65%)
Frame = +2 / +3
Query: 77 MTIERDLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCS 256
+ I D HMA G G SY+KNSR E + KPV+E A + Y+ LLP+TM++ DL C+
Sbjct: 72 INIRYDFHMADGEG*WSYSKNSRRPEIYFRETKPVVENAIKEVYTTLLPKTMIIGDLACA 251
Query: 257 SGPNTLRFISEVIGIIARHCK 319
+GPNTL F+S VI I HCK
Sbjct: 252 AGPNTLLFMSSVISTIVEHCK 314
Score = 71.6 bits (150), Expect(2) = 6e-036
Identities = 31/72 (43%), Positives = 41/72 (56%)
Frame = +2 / +3
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE A P YI GLP S+Y R+FP ESVH+FHS + +HW
Sbjct: 369 NDFNELFRLIEKFRRPNITGERAHLPPFYYIQGLPESYYNRLFPRESVHIFHSSYGLHWR 548
Query: 569 SQASQQLKDTQK 604
SQ + L+ +K
Sbjct: 549 SQELEGLESWRK 584
>gb|CD231033.1|CD231033 SS1_7_C11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_7_C11_A012 5', mRNA sequence
Length = 682
Score = 100 bits (212), Expect(2) = 1e-035
Identities = 41/81 (50%), Positives = 51/81 (62%)
Frame = +2 / +2
Query: 77 MTIERDLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCS 256
M I D HMA G GE SY+KNS E + KPV+E A + Y LLP+TM++ DL C+
Sbjct: 56 MNIRYDFHMAEGEGEWSYSKNSGRPEIYFRETKPVVENAIKEVYKTLLPKTMIIGDLACA 235
Query: 257 SGPNTLRFISEVIGIIARHCK 319
+GPNTL F+S VI I CK
Sbjct: 236 AGPNTLLFMSSVISTIVEQCK 298
Score = 72.1 bits (151), Expect(2) = 1e-035
Identities = 31/72 (43%), Positives = 41/72 (56%)
Frame = +2 / +2
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE A P YI GLP S+Y R+FP ESVH+FHS + +HW
Sbjct: 353 NDFNELFRLIEKFRRPNITGERAHLPPFYYIQGLPESYYNRLFPRESVHIFHSSYGLHWR 532
Query: 569 SQASQQLKDTQK 604
SQ + L+ +K
Sbjct: 533 SQEPEGLESWRK 568
>gb|CF756059.1|CF756059 DSAF1_3_F03.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_3_F03_A011 5', mRNA sequence
Length = 620
Score = 94.1 bits (199), Expect(3) = 2e-035
Identities = 37/70 (52%), Positives = 48/70 (68%)
Frame = +2 / +1
Query: 110 GNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNTLRFISE 289
G GE SY+KNSR E + KPV+E A + Y+ LLP+TM++ DL C++GPNTL F+S
Sbjct: 1 GEGEWSYSKNSRRPEIYFRETKPVVENAIKEVYTTLLPKTMIIGDLACAAGPNTLLFMSS 180
Query: 290 VIGIIARHCK 319
VI I HCK
Sbjct: 181 VISTIVEHCK 210
Score = 71.6 bits (150), Expect(3) = 2e-035
Identities = 31/72 (43%), Positives = 41/72 (56%)
Frame = +2 / +1
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE A P YI GLP S+Y R+FP ESVH+FHS + +HW
Sbjct: 265 NDFNELFRLIEKFRRPNITGERAHLPPFYYIQGLPESYYNRLFPRESVHIFHSSYGLHWR 444
Query: 569 SQASQQLKDTQK 604
SQ + L+ +K
Sbjct: 445 SQELEGLESWRK 480
Score = 28.1 bits (55), Expect(3) = 2e-035
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2 / +1
Query: 791 DIYITKNIPPPMVEMFHQHFVKEF 862
+IYITK P +V+ F + F K+F
Sbjct: 499 NIYITKTTTPFVVKQFQKLFYKDF 570
>gb|CW065635.1|CW065635 104_312_10523257_114_30129 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10523257, DNA
sequence
Length = 670
Score = 93.6 bits (198), Expect(3) = 5e-035
Identities = 36/72 (50%), Positives = 49/72 (68%)
Frame = +2 / +2
Query: 227 TMVVADLGCSSGPNTLRFISEVIGIIARHCKEHDRRHDYPQLQFFLNDLPGNDFNNLFLL 406
TMV+ADLGCSSGPN + F++ V+ ++ HCK H+ +L FFLNDLP NDFNNLF
Sbjct: 344 TMVIADLGCSSGPNAVLFVASVVRVVEEHCKSLLGCHEPLELLFFLNDLPKNDFNNLFRS 523
Query: 407 IQQFNKSIARNH 442
++Q + +H
Sbjct: 524 LEQIKNMVDIHH 559
Score = 56.5 bits (117), Expect(3) = 5e-035
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +2 / +2
Query: 467 PPCYISGLPGSFYTRIFPSESVHLFH 544
PP Y++GLPGSFYTR+FP SVH FH
Sbjct: 593 PPYYVAGLPGSFYTRLFPCHSVHFFH 670
Score = 42.3 bits (86), Expect(3) = 5e-035
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2 / +3
Query: 83 IERDLHMATGNGETSYTKNSRIQEKVMF 166
+ER+L M G+GETSY KNSR+Q +F
Sbjct: 9 VERNLRMVAGDGETSYAKNSRLQVCTVF 92
>gb|CN134837.1|CN134837 OX1_28_G03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_28_G03_A002 5', mRNA sequence
Length = 773
Score = 70.3 bits (147), Expect(4) = 3e-034
Identities = 31/72 (43%), Positives = 40/72 (55%)
Frame = +2 / +2
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE P YI GLP S+Y R+FP ESVHLFHS + +HW
Sbjct: 344 NDFNELFRSIEKFKRPNTTGEREHLPPLYYIMGLPESYYKRLFPRESVHLFHSSYCLHWR 523
Query: 569 SQASQQLKDTQK 604
SQ + L+ +K
Sbjct: 524 SQEPEGLEAWRK 559
Score = 58.3 bits (121), Expect(4) = 3e-034
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = +2 / +2
Query: 215 LLPQTMVVADLGCSSGPNTLRFISEVIGIIARHCK 319
LLP+TM++AD GCSS PNT+ FIS VI II CK
Sbjct: 185 LLPKTMIIADPGCSSRPNTMLFISSVINIIVEKCK 289
Score = 51.9 bits (107), Expect(4) = 3e-034
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +2 / +1
Query: 92 DLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQ 226
D HM G GE SY+KNSR QE + +P++E A + Y+ PQ
Sbjct: 61 DFHMTEGEGEWSYSKNSRRQEIFFLETRPMIENAIKEVYTTASPQ 195
Score = 28.1 bits (55), Expect(4) = 3e-034
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2 / +2
Query: 791 DIYITKNIPPPMVEMFHQHFVKEF 862
+IYITK P +V+ F + F K+F
Sbjct: 578 NIYITKTTTPFVVKQFRKLFYKDF 649
>gb|CN143383.1|CN143383 WOUND1_15_H12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_15_H12_A002 5', mRNA sequence
Length = 470
Score = 105 bits (224), Expect(2) = 4e-032
Identities = 42/81 (51%), Positives = 54/81 (66%)
Frame = +2 / +2
Query: 77 MTIERDLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCS 256
+ I D HMA G GE SY+KNSR E + KPV+E A + Y+ LLP+TM++ DL C+
Sbjct: 56 INIRYDFHMADGEGEWSYSKNSRRPEIYFRETKPVVENAIKEVYTTLLPKTMIIGDLACA 235
Query: 257 SGPNTLRFISEVIGIIARHCK 319
+GPNTL F+S VI I HCK
Sbjct: 236 AGPNTLLFMSSVISTIVEHCK 298
Score = 54.7 bits (113), Expect(2) = 4e-032
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +2 / +2
Query: 332 RHDYPQLQFFLNDLPGNDFNNLFLLIQQFNK 424
R D +LQFFLNDLPGNDFN LF LI++F +
Sbjct: 305 RDDSVELQFFLNDLPGNDFNELFRLIEKFRR 397
>gb|BM324133.1|BM324133 PIC1_24_E11.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 465
Score = 110 bits (234), Expect(2) = 4e-032
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +2 / +1
Query: 92 DLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNT 271
D HM G GE SY+KNSR QE + +P++E A + Y+ LLP+TM++ADLGCSSGPNT
Sbjct: 58 DFHMTEGEGEWSYSKNSRRQEIFFLETRPMIENAIKEVYTTLLPKTMIIADLGCSSGPNT 237
Query: 272 LRFISEVIGIIARHCK 319
+ FIS VI II CK
Sbjct: 238 MLFISSVINIIVEKCK 285
Score = 50.1 bits (103), Expect(2) = 4e-032
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +2 / +1
Query: 338 DYPQLQFFLNDLPGNDFNNLFLLIQQFNK 424
D +LQFFLNDLPGNDFN LF I++F +
Sbjct: 298 DCMELQFFLNDLPGNDFNELFRSIEKFKR 384
>gb|BM325132.1|BM325132 PIC1_40_D03.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 399
Score = 106 bits (227), Expect(2) = 3e-031
Identities = 42/76 (55%), Positives = 53/76 (69%)
Frame = +2 / +2
Query: 92 DLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNT 271
D HM G GE SY+KNSR QE + +P++E A + Y+ LLP+TM++ADLGCSSGPNT
Sbjct: 59 DFHMTEGEGEWSYSKNSRRQEIFFLETRPMIENAIKEVYTTLLPKTMIIADLGCSSGPNT 238
Query: 272 LRFISEVIGIIARHCK 319
+ FIS I II CK
Sbjct: 239 MLFISSDINIIVEKCK 286
Score = 50.6 bits (104), Expect(2) = 3e-031
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +2 / +2
Query: 338 DYPQLQFFLNDLPGNDFNNLFLLIQQFNK 424
D +LQFFLNDLPGNDFN LF I++F +
Sbjct: 299 DCMELQFFLNDLPGNDFNELFRTIEKFKR 385
>gb|CW065636.1|CW065636 104_312_10523257_115_30130 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10523257, DNA
sequence
Length = 593
Score = 91.3 bits (193), Expect(2) = 4e-031
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = +2 / -3
Query: 227 TMVVADLGCSSGPNTLRFISEVIGIIARHCKEHDRRHDYPQLQFFLNDLPGNDFNNLFLL 406
TMV+AD GCSSGPN + F++ V+ ++ HCK H+ +L FFLNDLP NDFNNLF
Sbjct: 516 TMVIADXGCSSGPNAVLFVASVVRVVEEHCKSLLGCHEPLELLFFLNDLPKNDFNNLFRS 337
Query: 407 IQQFNKSIARNH 442
++Q + +H
Sbjct: 336 LEQIKNMVDIHH 301
Score = 65.7 bits (137), Expect(2) = 4e-031
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +2 / -3
Query: 467 PPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWHSQ 574
PP Y++GLPGSFYTR+FP SVH FHS + + W SQ
Sbjct: 267 PPYYVAGLPGSFYTRLFPCHSVHFFHSSYCLMWLSQ 160
>gb|CW477828.1|CW477828 fsbb001f235f19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f235f19, DNA
sequence
Length = 580
Score = 72.5 bits (152), Expect(4) = 3e-030
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +2 / -1
Query: 449 EAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWHSQASQQL 589
+ +ALPP Y++GLPGSFYTR+FP VHLFHS + + W S+ +L
Sbjct: 247 DKGDALPPYYVAGLPGSFYTRLFPDRCVHLFHSSYCLMWRSKVPDEL 107
Score = 51.0 bits (105), Expect(4) = 3e-030
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +2 / -1
Query: 230 MVVADLGCSSGPNTLRFISEVIGIIA 307
MVVADLGCSSGPNTL +SEV+G +A
Sbjct: 460 MVVADLGCSSGPNTLLVVSEVLGAVA 383
Score = 43.2 bits (88), Expect(4) = 3e-030
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2 / -1
Query: 350 LQFFLNDLPGNDFNNLFLLIQQFNK 424
+QFFLNDLPGNDFN +F ++ F K
Sbjct: 334 VQFFLNDLPGNDFNLVFQSLELFKK 260
Score = 22.6 bits (43), Expect(4) = 3e-030
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / -3
Query: 125 SYTKNSRIQEK 157
SY NSR+QEK
Sbjct: 575 SYASNSRLQEK 543
>gb|BM324148.1|BM324148 PIC1_24_G05.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 535
Score = 73.0 bits (153), Expect(3) = 5e-029
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +2 / +3
Query: 185 EEATRAAYSALLPQTMVVADLGCSSGPNTLRFISEVIGIIARHCK 319
E A + Y+ LLP+TM++ADLGCSSGPNT+ FIS VI II CK
Sbjct: 9 ENAIKEVYTTLLPKTMIIADLGCSSGPNTMLFISSVINIIVEKCK 143
Score = 70.3 bits (147), Expect(3) = 5e-029
Identities = 31/72 (43%), Positives = 40/72 (55%)
Frame = +2 / +3
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE P YI GLP S+Y R+FP ESVHLFHS + +HW
Sbjct: 198 NDFNELFRSIEKFKRPNTTGEREHLPPLYYIMGLPESYYKRLFPRESVHLFHSSYCLHWR 377
Query: 569 SQASQQLKDTQK 604
SQ + L+ +K
Sbjct: 378 SQEPEGLEAWRK 413
Score = 28.1 bits (55), Expect(3) = 5e-029
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2 / +3
Query: 791 DIYITKNIPPPMVEMFHQHFVKEF 862
+IYITK P +V+ F + F K+F
Sbjct: 432 NIYITKTTTPFVVKQFQKLFYKDF 503
>gb|CW148147.1|CW148147 104_542_11140260_116_35003_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11140260, DNA
sequence
Length = 679
Score = 59.7 bits (124), Expect(4) = 8e-029
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +2 / -2
Query: 128 YTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNTLRFISEVIGIIA 307
Y + +Q++ M +K ++ A Y + +P+ VADLGCSSGPN L + +++G I
Sbjct: 495 YVLHFFLQKRGMDTLKSLITNAATDVYISQMPERFTVADLGCSSGPNALCLVEDIVGSIG 316
Query: 308 RHCKEHDRRHDYP 346
R C P
Sbjct: 315 RVCSHRSSSSQPP 277
Score = 55.1 bits (114), Expect(4) = 8e-029
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +2 / -2
Query: 467 PPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWHSQASQQLKD 595
P ++SG+PGSFY R+FP SVH S S+HW SQ L D
Sbjct: 156 PMVFLSGVPGSFYGRLFPRNSVHFICSCSSLHWLSQVPPGLFD 28
Score = 35.9 bits (72), Expect(4) = 8e-029
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2 / -2
Query: 344 PQLQFFLNDLPGNDFNNLFLLIQQF 418
P+ LNDLP NDFN +F + +F
Sbjct: 276 PEFSVLLNDLPTNDFNTIFFSLPEF 202
Score = 33.6 bits (67), Expect(4) = 8e-029
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2 / -2
Query: 83 IERDLHMATGNGETSYTKNSRIQ 151
+E LHM G GETSY +NS +Q
Sbjct: 675 VENILHMKEGLGETSYAQNSSLQ 607
>gb|BG051230.1|BG051230 FM1_57_H01.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 469
Score = 101 bits (215), Expect(2) = 8e-029
Identities = 42/89 (47%), Positives = 57/89 (64%)
Frame = +2 / +3
Query: 59 QVAAMPMTIERDLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALLPQTMVV 238
Q+ + + + D HM G GE SY+KNSR QE + KP++E A + Y+ LLP+TM++
Sbjct: 33 QLPKLLIDMNIDFHMTEGEGEWSYSKNSRRQEIFFRETKPMVENAIKEVYATLLPKTMII 212
Query: 239 ADLGCSSGPNTLRFISEVIGIIARHCKEH 325
ADLGCS GPN L FIS V+ I CK +
Sbjct: 213 ADLGCSVGPNALLFISSVLSSIIELCKSN 299
Score = 47.8 bits (98), Expect(2) = 8e-029
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +2 / +3
Query: 338 DYPQLQFFLNDLPGNDFNNLFLLIQQFNK 424
D +LQFFLNDLPGN+FN LF I++F +
Sbjct: 306 DSMELQFFLNDLPGNNFNELFRSIEKFKR 392
>gb|BM324826.1|BM324826 PIC1_36_C02.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 554
Score = 71.2 bits (149), Expect(3) = 2e-028
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = +2 / +1
Query: 197 RAAYSALLPQTMVVADLGCSSGPNTLRFISEVIGIIARHCK 319
R Y+ LLP+TM++ADLGCSSGPNT+ FIS VI II CK
Sbjct: 4 RGVYTTLLPKTMIIADLGCSSGPNTMLFISSVINIIVEKCK 126
Score = 70.3 bits (147), Expect(3) = 2e-028
Identities = 31/72 (43%), Positives = 40/72 (55%)
Frame = +2 / +1
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE P YI GLP S+Y R+FP ESVHLFHS + +HW
Sbjct: 181 NDFNELFRSIEKFKRPNTTGEREHLPPLYYIMGLPESYYKRLFPRESVHLFHSSYCLHWR 360
Query: 569 SQASQQLKDTQK 604
SQ + L+ +K
Sbjct: 361 SQEPEGLEAWRK 396
Score = 28.1 bits (55), Expect(3) = 2e-028
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2 / +1
Query: 791 DIYITKNIPPPMVEMFHQHFVKEF 862
+IYITK P +V+ F + F K+F
Sbjct: 415 NIYITKTTTPFVVKQFQKLFYKDF 486
>gb|BM325406.1|BM325406 PIC1_44_B08.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 558
Score = 71.2 bits (149), Expect(3) = 2e-028
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = +2 / +1
Query: 197 RAAYSALLPQTMVVADLGCSSGPNTLRFISEVIGIIARHCK 319
R Y+ LLP+TM++ADLGCSSGPNT+ FIS VI II CK
Sbjct: 4 RGVYTTLLPKTMIIADLGCSSGPNTMLFISSVINIIVEKCK 126
Score = 70.3 bits (147), Expect(3) = 2e-028
Identities = 31/72 (43%), Positives = 40/72 (55%)
Frame = +2 / +1
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE P YI GLP S+Y R+FP ESVHLFHS + +HW
Sbjct: 181 NDFNELFRSIEKFKRPNTTGEREHLPPLYYIMGLPESYYKRLFPRESVHLFHSSYCLHWR 360
Query: 569 SQASQQLKDTQK 604
SQ + L+ +K
Sbjct: 361 SQEPEGLEAWRK 396
Score = 28.1 bits (55), Expect(3) = 2e-028
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2 / +1
Query: 791 DIYITKNIPPPMVEMFHQHFVKEF 862
+IYITK P +V+ F + F K+F
Sbjct: 415 NIYITKTTTPFVVKQFQKLFYKDF 486
>gb|CN142539.1|CN142539 WOUND1_10_D07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_10_D07_A002 5', mRNA sequence
Length = 810
Score = 75.3 bits (158), Expect(3) = 9e-027
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +2 / +1
Query: 167 QIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNTLRFISEVIGIIARHCK 319
+ KPV+E A + Y+ LLP+TM++ DL C++GPNTL F+S VI I HCK
Sbjct: 562 ETKPVVENAIKEVYTTLLPKTMIIGDLACAAGPNTLLFMSSVISTIVEHCK 714
Score = 53.8 bits (111), Expect(3) = 9e-027
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +2 / +1
Query: 332 RHDYPQLQFFLNDLPGNDFNNLFLLIQQF 418
R D +LQFFLNDLPGNDFN LF LI++F
Sbjct: 721 RDDSVELQFFLNDLPGNDFNELFRLIEKF 807
Score = 35.9 bits (72), Expect(3) = 9e-027
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 77 MTIERDLHMATGNGETSYTKNSR 145
+ I D HMA G GE SY+KNSR
Sbjct: 72 INIRYDFHMADGEGEWSYSKNSR 140
>gb|CW160293.1|CW160293 104_566_11149807_116_36428_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149807, DNA
sequence
Length = 755
Score = 66.1 bits (138), Expect(3) = 1e-026
Identities = 25/42 (59%), Positives = 30/42 (71%)
Frame = +2 / -3
Query: 449 EAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWHSQ 574
E +A PCYI+GLPGS YTRI P +SVHLFHS + W S+
Sbjct: 201 EEKQAAVPCYIAGLPGSMYTRILPCQSVHLFHSSHCLIWRSK 76
Score = 52.4 bits (108), Expect(3) = 1e-026
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +2 / -3
Query: 227 TMVVADLGCSSGPNTLRFISEVIGIIARHCKEHDRRHDY 343
TMV ADLGCSSGPNTL +SEV+ I H + + +Y
Sbjct: 456 TMVAADLGCSSGPNTLLVVSEVMNTIGAHVVQEEPADNY 340
Score = 41.4 bits (84), Expect(3) = 1e-026
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2 / -3
Query: 347 QLQFFLNDLPGNDFNNLFLLIQQ 415
++QFFLNDLPGNDFN +F + Q
Sbjct: 321 EVQFFLNDLPGNDFNLVFRSLDQ 253
>gb|CL184871.1|CL184871 104_398_10899146_116_32373_007 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899146, DNA
sequence
Length = 730
Score = 66.1 bits (138), Expect(3) = 1e-026
Identities = 25/42 (59%), Positives = 30/42 (71%)
Frame = +2 / -1
Query: 449 EAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWHSQ 574
E +A PCYI+GLPGS YTRI P +SVHLFHS + W S+
Sbjct: 388 EEKQAAVPCYIAGLPGSMYTRILPCQSVHLFHSSHCLIWRSK 263
Score = 52.4 bits (108), Expect(3) = 1e-026
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +2 / -1
Query: 227 TMVVADLGCSSGPNTLRFISEVIGIIARHCKEHDRRHDY 343
TMV ADLGCSSGPNTL +SEV+ I H + + +Y
Sbjct: 643 TMVAADLGCSSGPNTLLVVSEVMNTIGAHVVQEEPADNY 527
Score = 41.4 bits (84), Expect(3) = 1e-026
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2 / -1
Query: 347 QLQFFLNDLPGNDFNNLFLLIQQ 415
++QFFLNDLPGNDFN +F + Q
Sbjct: 508 EVQFFLNDLPGNDFNLVFRSLDQ 440
>gb|CW104023.1|CW104023 104_472_11012205_116_34432_081 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11012205, DNA
sequence
Length = 728
Score = 66.1 bits (138), Expect(3) = 1e-026
Identities = 25/42 (59%), Positives = 30/42 (71%)
Frame = +2 / +2
Query: 449 EAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWHSQ 574
E +A PCYI+GLPGS YTRI P +SVHLFHS + W S+
Sbjct: 545 EEKQAAVPCYIAGLPGSMYTRILPCQSVHLFHSSHCLIWRSK 670
Score = 52.4 bits (108), Expect(3) = 1e-026
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +2 / +2
Query: 227 TMVVADLGCSSGPNTLRFISEVIGIIARHCKEHDRRHDY 343
TMV ADLGCSSGPNTL +SEV+ I H + + +Y
Sbjct: 290 TMVAADLGCSSGPNTLLVVSEVMNTIGAHVVQEEPADNY 406
Score = 41.4 bits (84), Expect(3) = 1e-026
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2 / +2
Query: 347 QLQFFLNDLPGNDFNNLFLLIQQ 415
++QFFLNDLPGNDFN +F + Q
Sbjct: 425 EVQFFLNDLPGNDFNLVFRSLDQ 493
>gb|CL184870.1|CL184870 104_398_10899146_114_32369_007 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899146, DNA
sequence
Length = 721
Score = 66.1 bits (138), Expect(3) = 1e-026
Identities = 25/42 (59%), Positives = 30/42 (71%)
Frame = +2 / +1
Query: 449 EAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWHSQ 574
E +A PCYI+GLPGS YTRI P +SVHLFHS + W S+
Sbjct: 466 EEKQAAVPCYIAGLPGSMYTRILPCQSVHLFHSSHCLIWRSK 591
Score = 52.4 bits (108), Expect(3) = 1e-026
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +2 / +1
Query: 227 TMVVADLGCSSGPNTLRFISEVIGIIARHCKEHDRRHDY 343
TMV ADLGCSSGPNTL +SEV+ I H + + +Y
Sbjct: 211 TMVAADLGCSSGPNTLLVVSEVMNTIGAHVVQEEPADNY 327
Score = 41.4 bits (84), Expect(3) = 1e-026
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2 / +1
Query: 347 QLQFFLNDLPGNDFNNLFLLIQQ 415
++QFFLNDLPGNDFN +F + Q
Sbjct: 346 EVQFFLNDLPGNDFNLVFRSLDQ 414
>gb|BZ333147.1|BZ333147 hx56b02.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx56b02 5', DNA sequence
Length = 513
Score = 66.1 bits (138), Expect(3) = 1e-025
Identities = 26/53 (49%), Positives = 39/53 (73%)
Frame = +2 / -1
Query: 62 VAAMPMTIERDLHMATGNGETSYTKNSRIQEKVMFQIKPVLEEATRAAYSALL 220
+A + M +ERDLHM+ G+GE SY NSR+QEK + + +PVL +A AA+++ L
Sbjct: 360 LAKVAMKVERDLHMSRGDGEDSYASNSRLQEKSILKTRPVLHKAVAAAHASSL 202
Score = 51.0 bits (105), Expect(3) = 1e-025
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +2 / -1
Query: 230 MVVADLGCSSGPNTLRFISEVIGIIA 307
MVVADLGCSSGPNTL +SEV+G +A
Sbjct: 183 MVVADLGCSSGPNTLLVVSEVLGAVA 106
Score = 39.1 bits (79), Expect(3) = 1e-025
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2 / -1
Query: 350 LQFFLNDLPGNDFNNLF 400
+QFFLNDLPGNDFN +F
Sbjct: 57 VQFFLNDLPGNDFNLVF 7
>gb|AW563740.1|AW563740 LG1_248_A08.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 543
Score = 70.3 bits (147), Expect(2) = 2e-025
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +2 / +3
Query: 389 NNLFLLIQQFNKSIARNHKGEAAEALPPCYISGLPGSFYTRIFPSESVHLFHSLFSVHWH 568
N+ L + K N GE A P YI GLP S+Y R+FP ESVH+FHS + +HW
Sbjct: 201 NDFNELFRLIEKFRRPNITGERAHLPPFYYIQGLPESYYNRLFPRESVHIFHSSYGLHWR 380
Query: 569 SQASQQL 589
SQ + L
Sbjct: 381 SQVFRSL 401
Score = 67.5 bits (141), Expect(2) = 2e-025
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +2 / +3
Query: 182 LEEATRAAYSALLPQTMVVADLGCSSGPNTLRFISEVIGIIARHCK 319
+E A + Y+ LLP+TM++ DL C++GPNTL F+S VI I HCK
Sbjct: 9 VENAIKEVYTTLLPKTMIIGDLACAAGPNTLLFMSSVISTIVEHCK 146
>gb|CL156285.1|CL156285 104_343_10782760_116_31476_088 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782760, DNA
sequence
Length = 721
Score = 79.4 bits (167), Expect(2) = 6e-023
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +2 / +3
Query: 152 EKVMFQIKPVLEEATRAAYSALLPQTMVVADLGCSSGPNTLRFISEVIGIIARHCK 319
E + +P++E A + Y+ LLP+TM++ADLGCSSGPNT+ FIS VI II CK
Sbjct: 402 EIFFLETRPMIENAIKEVYTTLLPKTMIIADLGCSSGPNTMLFISSVINIIVEKCK 569
Score = 50.1 bits (103), Expect(2) = 6e-023
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +2 / +3
Query: 338 DYPQLQFFLNDLPGNDFNNLFLLIQQFNK 424
D +LQFFLNDLPGNDFN LF I++F +
Sbjct: 582 DCMELQFFLNDLPGNDFNELFRSIEKFKR 668
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,604,567,259
Number of Sequences: 832831
Number of extensions: 25416695
Number of successful extensions: 157198
Number of sequences better than 1.0e-020: 53
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 39523585085
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)