TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8161196.3.1
(825 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN151664.1|CN151664 WOUND1_76_G03.g1_A002 Wounded leaves... 375 e-118
gb|CN142825.1|CN142825 WOUND1_12_B08.g1_A002 Wounded leaves... 377 e-117
gb|CW207479.1|CW207479 104_636_11188164_148_36970_038 Sorgh... 363 e-108
gb|CL184021.1|CL184021 104_397_10898570_116_32365_015 Sorgh... 363 e-105
gb|CW251131.1|CW251131 104_713_11223763_148_35058_070 Sorgh... 292 1e-096
gb|BG412316.1|BG412316 OV2_40_D10.b1_A002 Ovary 2 (OV2) Sor... 313 1e-088
gb|BZ628064.1|BZ628064 ih57f05.b1 WGS-SbicolorF (DH5a methy... 171 5e-071
gb|CD208421.1|CD208421 HS1_37_D10.g1_A012 Heat-shocked seed... 170 1e-050
gb|CW232188.1|CW232188 104_681_11211528_148_37350_084 Sorgh... 163 5e-048
gb|CL170200.1|CL170200 104_370_10813622_116_31789_326 Sorgh... 105 6e-022
gb|CW276221.1|CW276221 104_749_11405372_148_35393_068 Sorgh... 105 6e-022
>gb|CN151664.1|CN151664 WOUND1_76_G03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_76_G03_A002 5', mRNA sequence
Length = 807
Score = 375 bits (814), Expect(5) = e-118
Identities = 156/177 (88%), Positives = 158/177 (89%)
Frame = +3 / +3
Query: 231 LRAAAPPRYVSHRIPLDPAAERGTRRWIW**H*TASGISLILSRIMVPLCGFCGKQRSMI 410
LR APPRYVS RIPLD AAE+GT RW **H*TASGIS ILSRIM LC FCGKQRSMI
Sbjct: 171 LRGEAPPRYVSRRIPLDSAAEQGTGRWN***H*TASGISQILSRIMASLCDFCGKQRSMI 350
Query: 411 YCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDNTSLCQNCDWNG 590
YCRSDAASLCLSCDR+VHSANALSRRH TLLCDRCG QPASVRCLEDN SLCQNCDWNG
Sbjct: 351 YCRSDAASLCLSCDRNVHSANALSRRHTTTLLCDRCGSQPASVRCLEDNASLCQNCDWNG 530
Query: 591 HDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDIPTVAAEPNYEDGLSMMTIDD 761
HDA SGASGHKRQAINCYSGCPSSAELSRIWSFI DIPTV AEPN EDGLSMMTIDD
Sbjct: 531 HDAPSGASGHKRQAINCYSGCPSSAELSRIWSFIMDIPTVPAEPNCEDGLSMMTIDD 701
Score = 363 bits (788), Expect(3) = e-112
Identities = 155/196 (79%), Positives = 162/196 (82%)
Frame = -1 / -1
Query: 762 CHQLSSCLVHPHSWAQLLQSGYR**MTRFSKALLMMGTLSNSLWPAFYAQKPLMLHHAHS 583
CHQLSSCL+HPHSWAQ +QSGY **MTRF KALLMMGTLSNSL PAFYAQKPLM+HHAHS
Sbjct: 702 CHQLSSCLIHPHSWAQQVQSGYP**MTRFLKALLMMGTLSNSL*PAFYAQKPLMVHHAHS 523
Query: 582 NHSFGKVMCCPQDIGLMQAVNHNDHKEGSFYDAETVH*LNERYGRMISTMMPHPICSRSL 403
NHSFGKVM CPQDI LMQA NH+DHKEGS YDAET H*LNE YGRMISTMMPH ICSRSL
Sbjct: 522 NHSFGKVMHCPQDI*LMQAENHSDHKEGSLYDAETAH*LNEHYGRMISTMMPHLICSRSL 343
Query: 402 TFVSHRNHREEP*SWTVLEKFHSLFSATTKSTFWYPVQQLDPVESYAIRIAAELLHGARI 223
TFVSHRNH+E P*SWTV EKFH LFSAT STF PVQQL+PVESY IRIAA LLHG
Sbjct: 342 TFVSHRNHKERP*SWTVFEKFHLLFSATINSTFPCPVQQLNPVESYVIRIAAALLHGELG 163
Query: 222 QPARPRRGTTQTAEQR 175
R R + QR
Sbjct: 162 SDPRRRGQGAEPTTQR 115
Score = 323 bits (699), Expect(6) = e-101
Identities = 145/177 (81%), Positives = 150/177 (84%)
Frame = -3 / -3
Query: 763 LSSIVIMLSPSS*LGSAATVGISVINDQILESSADDGHPE*QFMACLLCPEAPDAASCPF 584
LSSIVIML+PSS LGSA TVGIS+INDQILESSADDGHPE*QF+ACLLCPEAPD ASCPF
Sbjct: 703 LSSIVIMLNPSSQLGSAGTVGISIINDQILESSADDGHPE*QFIACLLCPEAPDGASCPF 524
Query: 583 QSQFWQSDVLSSRHRTDAGCKPXXXXXXXXXXXRDSALAE*TLRSHDKHNDAASDLQ*II 404
QSQFWQSD LSSRH TDAG +P RDSALAE*TLRSHDKHNDAASDLQ*II
Sbjct: 523 QSQFWQSDALSSRHLTDAG*EPQRSQRRVVV*RRDSALAE*TLRSHDKHNDAASDLQ*II 344
Query: 403 DLCFPQKPQRGTMILDSIREIPLAVQCYYQIHLLVPRSAAGSSGILCDTYRGGAAAR 233
DLCFPQK QR MILDSI EIPLAVQCYYQ HL VP SAA SSGIL DTYRGGA+ R
Sbjct: 343 DLCFPQKSQREAMILDSI*EIPLAVQCYYQFHLPVPCSAAESSGILRDTYRGGASPR 173
Score = 321 bits (695), Expect(2) = 1e-090
Identities = 151/197 (76%), Positives = 156/197 (79%)
Frame = -2 / -2
Query: 761 VINCHHA*SILIVGLSCYSRDIGNK*PDSRKLC**WAP*VTVYGLPFMPRSP*CCIMPIP 582
VINCHHA*SIL VGLS YSRDI NK*PDS KLC**WAP*VTVY LPFMPRSP* CIMPIP
Sbjct: 701 VINCHHA*SILTVGLSRYSRDIHNK*PDS*KLC**WAP*VTVYSLPFMPRSP*WCIMPIP 522
Query: 581 ITVLAK*CVVLKTSD*CRL*TTTITKKGPSMTPRQCIS*MNATVA**AQ*CRIRSAVDH* 402
ITVLAK*C+VLKTSD*CRL TT ITKKG MTPRQ IS*MN TVA**AQ*CRI SAVDH*
Sbjct: 521 ITVLAK*CIVLKTSD*CRLRTTAITKKGRCMTPRQRIS*MNITVA**AQ*CRI*SAVDH* 342
Query: 401 PLFPTETTERNHDPGQY*RNSTRCSVLLPNPPSGTPFSSWIQWNPMRYVSRRSCCTELGS 222
PLFPTE T+R HDPGQY RNST CSVLL PPS FSS IQWNP YVSRR TE
Sbjct: 341 PLFPTEITKRGHDPGQYLRNSTCCSVLLSIPPSRALFSS*IQWNPT*YVSRRRFSTESSD 162
Query: 221 NPRGQGAEPPKRRSSGG 171
R A+ + +GG
Sbjct: 161 PTRAGAAKARNQPPNGG 111
Score = 319 bits (691), Expect(4) = 6e-097
Identities = 140/163 (85%), Positives = 149/163 (91%)
Frame = +2 / +2
Query: 275 TGSSC*TGYQKVDLVVALNSEWNFSNTVQDHGSSLWFLWETKVNDLLQIGCGIIVLIMRP 454
TG SC*TG+ KV+L+VALNS+WNFSNTVQDHG SL FLWETKVNDLLQI CGIIVLIMRP
Sbjct: 215 TGFSC*TGHGKVELIVALNSKWNFSNTVQDHGLSL*FLWETKVNDLLQIRCGIIVLIMRP 394
Query: 455 *RSFS*CTVSAS*KDPSL*SLWFTACISPMS*GQHITLPKL*LEWA*CSIRGFWA*KAGH 634
* SFS*C VSAS DPSL*SLWF+ACIS MS*GQ ITLPKL*LEWA*C+IRGFWA*KAG+
Sbjct: 395 *CSFS*CAVSASYNDPSL*SLWFSACISQMS*GQCITLPKL*LEWA*CTIRGFWA*KAGY 574
Query: 635 KLLLRVPIISRAFENLVIYYRYPDCSS*AQL*GWTKHDDN**Q 763
KLLLRVPIISRAF+NLVIYY YPDC+ *AQL*GW KHDDN**Q
Sbjct: 575 KLLLRVPIISRAFKNLVIYYGYPDCTC*AQL*GWIKHDDN**Q 703
Score = 308 bits (667), Expect(2) = 3e-087
Identities = 136/177 (76%), Positives = 145/177 (81%)
Frame = +1 / +1
Query: 232 SVQQLRRDTYRIGFHWIQLLNGVPEGGFGSSTEQRVEFL*YCPGSWFLSVVSVGNKGQ*S 411
SV++ RRDTY +GFHWIQLLN EGG SSTEQ+VEFL YCPGSW L V+SVGNKGQ*S
Sbjct: 172 SVEKRRRDTYHVGFHWIQLLNRAREGGIDSSTEQQVEFLKYCPGSWPLFVISVGNKGQ*S 351
Query: 412 TADRMRHHCAYHATVAFIQLMHCLGVIEGPFFVIVVVYSLHQSDVLRTTHHFAKTVIXXX 591
TAD+MRHHCAYHATV FIQLM CLGVI+ PFFVI VV SLHQSDVLRT HHFAKTVI
Sbjct: 352 TADQMRHHCAYHATVMFIQLMRCLGVIQRPFFVIAVVLSLHQSDVLRTMHHFAKTVIGMG 531
Query: 592 XXXXXXXXXIKGRP*TVTQGAHHQQSFRESGHLLPISRL*QLSPTMRMD*A**QLMT 762
IKGR *TVTQGAHHQQSF+ESGHLL ISRL LSPT+RMD*A**QLMT
Sbjct: 532 MMHHQGLLGIKGRL*TVTQGAHHQQSFQESGHLLWISRLYLLSPTVRMD*A**QLMT 702
Score = 49.6 bits (102), Expect(5) = e-118
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1 / +3
Query: 763 SDVTNHHGASDDKRLLEIANT 825
SDVTNHH ASDDKRLLEIANT
Sbjct: 702 SDVTNHHDASDDKRLLEIANT 764
Score = 48.3 bits (99), Expect(3) = e-112
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -3 / -1
Query: 823 C*LFPTIVYHLKHRDD*SHH 764
C*LFPT+ YHLKH DD*SHH
Sbjct: 762 C*LFPTVFYHLKHHDD*SHH 703
Score = 45.5 bits (93), Expect(6) = e-101
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -1 / -2
Query: 825 CVSYFQQSFII*STVMISHIT 763
CVSYFQQSFII*S +MISHIT
Sbjct: 764 CVSYFQQSFII*SIMMISHIT 702
Score = 40.0 bits (81), Expect(4) = 6e-097
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +2 / +1
Query: 764 VM*LIITVLQMINDCWK*LT 823
VM*LII +LQMI DCWK*LT
Sbjct: 703 VM*LIIMMLQMIKDCWK*LT 762
Score = 35.4 bits (71), Expect(2) = 3e-087
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +3 / +2
Query: 762 K*CD*SSRCFR**TIVGNS*H 824
+*CD*SS CFR** VGNS*H
Sbjct: 701 Q*CD*SS*CFR**KTVGNS*H 763
Score = 34.1 bits (68), Expect(2) = 1e-090
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2 / -3
Query: 824 VLAISNNRLSSEAP**LVTSL 762
VLAISN+ LSSEA **LVTSL
Sbjct: 763 VLAISNSLLSSEAS**LVTSL 701
Score = 33.1 bits (66), Expect(3) = e-112
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2 / -1
Query: 185 RSSGGRDREAFAVAAPMKKKT 123
R RDREAFAVAAP++K T
Sbjct: 105 RGERERDREAFAVAAPVEKTT 43
Score = 31.8 bits (63), Expect(6) = e-101
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1 / -3
Query: 171 ERPRSFRCCRADEEKN 124
ER RSFRCCR+ E N
Sbjct: 91 ERSRSFRCCRSGRENN 44
Score = 29.9 bits (59), Expect(4) = 6e-097
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3 / +1
Query: 150 SESFSVSPTAAPPFGWFRALAA 215
S S + P A P GWFRALAA
Sbjct: 82 SISLPLPPAAPPLGGWFRALAA 147
Score = 29.9 bits (59), Expect(5) = e-118
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 129 FLHRRGNSESFSVSPTAAP 185
FL+R GNSESFS+S P
Sbjct: 49 FLYRSGNSESFSISLPLPP 105
Score = 25.4 bits (49), Expect(6) = e-101
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3 / -2
Query: 214 AAKARNHPNGGAAVG 170
AAKARN P G A G
Sbjct: 146 AAKARNQPPNGGAAG 102
Score = 24.9 bits (48), Expect(4) = 6e-097
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2 / +3
Query: 104 LSQKEAVFFSSSARQQRKLLGLS 172
L + FS RQQRKLL LS
Sbjct: 24 LGSRRRRLFSLPERQQRKLLDLS 92
Score = 24.4 bits (47), Expect(5) = e-118
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2 / +3
Query: 191 WVVPRLGRA 217
W+VPRLGRA
Sbjct: 123 WLVPRLGRA 149
Score = 23.1 bits (44), Expect(5) = e-118
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2 / +1
Query: 80 WQNLLLVLLSQKEAVFF 130
WQNLLLVL + E F
Sbjct: 1 WQNLLLVLSALAEGGCF 51
Score = 21.7 bits (41), Expect(6) = e-101
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -1 / -2
Query: 129 KNTASFCERRTRRRFC 82
K S RTRRRFC
Sbjct: 50 KQPPSARAERTRRRFC 3
Score = 21.7 bits (41), Expect(6) = e-101
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3 / -2
Query: 241 AARSSDPTRAAKAR 200
+ SSDPTRA A+
Sbjct: 179 STESSDPTRAGAAK 138
>gb|CN142825.1|CN142825 WOUND1_12_B08.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_12_B08_A002 5', mRNA sequence
Length = 762
Score = 377 bits (818), Expect(4) = e-117
Identities = 157/177 (88%), Positives = 159/177 (89%)
Frame = +3 / +1
Query: 231 LRAAAPPRYVSHRIPLDPAAERGTRRWIW**H*TASGISLILSRIMVPLCGFCGKQRSMI 410
LR APPRYVS RIPLD AAE+GT RW **H*TASG S ILSRIM LC FCGKQRSMI
Sbjct: 136 LRGEAPPRYVSRRIPLDSAAEQGTGRWN***H*TASGNSQILSRIMASLCDFCGKQRSMI 315
Query: 411 YCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDNTSLCQNCDWNG 590
YCRSDAASLCLSCDR+VHSANALSRRH RTLLCDRCG QPASVRCLEDN SLCQNCDWNG
Sbjct: 316 YCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCGSQPASVRCLEDNASLCQNCDWNG 495
Query: 591 HDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDIPTVAAEPNYEDGLSMMTIDD 761
HDAASGASGHKRQAINCYSGCPSSAELSRIWSFI DIPTV AEPN EDGLSMMTIDD
Sbjct: 496 HDAASGASGHKRQAINCYSGCPSSAELSRIWSFIMDIPTVPAEPNCEDGLSMMTIDD 666
Score = 363 bits (786), Expect(3) = e-110
Identities = 155/196 (79%), Positives = 161/196 (82%)
Frame = -1 / -3
Query: 762 CHQLSSCLVHPHSWAQLLQSGYR**MTRFSKALLMMGTLSNSLWPAFYAQKPLMLHHAHS 583
CHQLSSCL+HPHSWAQ +QSGY **MTRF KALLMMGTLSNSL PAFYAQKPLMLHHAHS
Sbjct: 667 CHQLSSCLIHPHSWAQQVQSGYP**MTRFLKALLMMGTLSNSL*PAFYAQKPLMLHHAHS 488
Query: 582 NHSFGKVMCCPQDIGLMQAVNHNDHKEGSFYDAETVH*LNERYGRMISTMMPHPICSRSL 403
NHSFGKVM CPQDI LMQA NH+DHKEGS YDAET H*LNE YGRMISTMMPH ICSRSL
Sbjct: 487 NHSFGKVMHCPQDI*LMQAENHSDHKEGSLYDAETAH*LNEHYGRMISTMMPHLICSRSL 308
Query: 402 TFVSHRNHREEP*SWTVLEKFHSLFSATTKSTFWYPVQQLDPVESYAIRIAAELLHGARI 223
TFVSHRNH+E P*SWTV E FH LFSAT STF PVQQL+PVESY IRIAA LLHG
Sbjct: 307 TFVSHRNHKERP*SWTVFENFHLLFSATINSTFPCPVQQLNPVESYVIRIAAALLHGELG 128
Query: 222 QPARPRRGTTQTAEQR 175
R R + QR
Sbjct: 127 SDPRRRGQGAEPTTQR 80
Score = 326 bits (706), Expect(2) = 4e-092
Identities = 152/197 (77%), Positives = 157/197 (79%)
Frame = -2 / -1
Query: 761 VINCHHA*SILIVGLSCYSRDIGNK*PDSRKLC**WAP*VTVYGLPFMPRSP*CCIMPIP 582
VINCHHA*SIL VGLS YSRDI NK*PDS KLC**WAP*VTVY LPFMPRSP*CCIMPIP
Sbjct: 666 VINCHHA*SILTVGLSRYSRDIHNK*PDS*KLC**WAP*VTVYSLPFMPRSP*CCIMPIP 487
Query: 581 ITVLAK*CVVLKTSD*CRL*TTTITKKGPSMTPRQCIS*MNATVA**AQ*CRIRSAVDH* 402
ITVLAK*C+VLKTSD*CRL TT ITKKGP MTPRQ IS*MN TVA**AQ*CRI SAVDH*
Sbjct: 486 ITVLAK*CIVLKTSD*CRLRTTAITKKGPCMTPRQRIS*MNITVA**AQ*CRI*SAVDH* 307
Query: 401 PLFPTETTERNHDPGQY*RNSTRCSVLLPNPPSGTPFSSWIQWNPMRYVSRRSCCTELGS 222
PLFPTE T+R HDPGQY R ST CSVLL PPS FSS IQWNP YVSRR TE
Sbjct: 306 PLFPTEITKRGHDPGQYLRISTCCSVLLSIPPSRALFSS*IQWNPT*YVSRRRFSTESSD 127
Query: 221 NPRGQGAEPPKRRSSGG 171
R A+ + +GG
Sbjct: 126 PTRAGAAKARNQPPNGG 76
Score = 323 bits (699), Expect(4) = 3e-098
Identities = 145/177 (81%), Positives = 150/177 (84%)
Frame = -3 / -2
Query: 763 LSSIVIMLSPSS*LGSAATVGISVINDQILESSADDGHPE*QFMACLLCPEAPDAASCPF 584
LSSIVIML+PSS LGSA TVGIS+INDQILESSADDGHPE*QF+ACLLCPEAPDAASCPF
Sbjct: 668 LSSIVIMLNPSSQLGSAGTVGISIINDQILESSADDGHPE*QFIACLLCPEAPDAASCPF 489
Query: 583 QSQFWQSDVLSSRHRTDAGCKPXXXXXXXXXXXRDSALAE*TLRSHDKHNDAASDLQ*II 404
QSQFWQSD LSSRH TDAG +P RDSALAE*TLRSHDKHNDAASDLQ*II
Sbjct: 488 QSQFWQSDALSSRHLTDAG*EPQRSQRRVLV*RRDSALAE*TLRSHDKHNDAASDLQ*II 309
Query: 403 DLCFPQKPQRGTMILDSIREIPLAVQCYYQIHLLVPRSAAGSSGILCDTYRGGAAAR 233
DLCFPQK QR MILDSI E PLAVQCYYQ HL VP SAA SSGIL DTYRGGA+ R
Sbjct: 308 DLCFPQKSQREAMILDSI*EFPLAVQCYYQFHLPVPCSAAESSGILRDTYRGGASPR 138
Score = 320 bits (693), Expect(3) = 8e-095
Identities = 141/163 (86%), Positives = 149/163 (91%)
Frame = +2 / +3
Query: 275 TGSSC*TGYQKVDLVVALNSEWNFSNTVQDHGSSLWFLWETKVNDLLQIGCGIIVLIMRP 454
TG SC*TG+ KV+L+VALNS+W FSNTVQDHG SL FLWETKVNDLLQI CGIIVLIMRP
Sbjct: 180 TGFSC*TGHGKVELIVALNSKWKFSNTVQDHGLSL*FLWETKVNDLLQIRCGIIVLIMRP 359
Query: 455 *RSFS*CTVSAS*KDPSL*SLWFTACISPMS*GQHITLPKL*LEWA*CSIRGFWA*KAGH 634
* SFS*C VSAS KDPSL*SLWF+ACIS MS*GQ ITLPKL*LEWA*CSIRGFWA*KAG+
Sbjct: 360 *CSFS*CAVSASYKDPSL*SLWFSACISQMS*GQCITLPKL*LEWA*CSIRGFWA*KAGY 539
Query: 635 KLLLRVPIISRAFENLVIYYRYPDCSS*AQL*GWTKHDDN**Q 763
KLLLRVPIISRAF+NLVIYY YPDC+ *AQL*GW KHDDN**Q
Sbjct: 540 KLLLRVPIISRAFKNLVIYYGYPDCTC*AQL*GWIKHDDN**Q 668
Score = 309 bits (670), Expect(2) = 2e-087
Identities = 136/178 (76%), Positives = 146/178 (82%)
Frame = +1 / +2
Query: 232 SVQQLRRDTYRIGFHWIQLLNGVPEGGFGSSTEQRVEFL*YCPGSWFLSVVSVGNKGQ*S 411
SV++ RRDTY +GFHWIQLLN EGG SSTEQ+VE L YCPGSW L V+SVGNKGQ*S
Sbjct: 137 SVEKRRRDTYHVGFHWIQLLNRAREGGIDSSTEQQVEILKYCPGSWPLFVISVGNKGQ*S 316
Query: 412 TADRMRHHCAYHATVAFIQLMHCLGVIEGPFFVIVVVYSLHQSDVLRTTHHFAKTVIXXX 591
TAD+MRHHCAYHATV FIQLM CLGVI+GPFFVI VV SLHQSDVLRT HHFAKTVI
Sbjct: 317 TADQMRHHCAYHATVMFIQLMRCLGVIQGPFFVIAVVLSLHQSDVLRTMHHFAKTVIGMG 496
Query: 592 XXXXXXXXXIKGRP*TVTQGAHHQQSFRESGHLLPISRL*QLSPTMRMD*A**QLMTS 765
IKGR *TVTQGAHHQQSF+ESGHLL ISRL LSPT+RMD*A**QLMT+
Sbjct: 497 MMQHQGLLGIKGRL*TVTQGAHHQQSFQESGHLLWISRLYLLSPTVRMD*A**QLMTA 670
Score = 49.6 bits (102), Expect(4) = e-117
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1 / +1
Query: 763 SDVTNHHGASDDKRLLEIANT 825
SDVTNHH ASDDKRLLEIANT
Sbjct: 667 SDVTNHHDASDDKRLLEIANT 729
Score = 44.6 bits (91), Expect(3) = e-110
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -3
Query: 823 C*LFPTIVYHLKHRDD*SH 767
C*LFPT+ YHLKH DD*SH
Sbjct: 727 C*LFPTVFYHLKHHDD*SH 671
Score = 43.2 bits (88), Expect(4) = 3e-098
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = -1 / -1
Query: 825 CVSYFQQSFII*STVMISHI 766
CVSYFQQSFII*S +MISHI
Sbjct: 729 CVSYFQQSFII*SIMMISHI 670
Score = 38.2 bits (77), Expect(3) = 8e-095
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2 / +2
Query: 767 M*LIITVLQMINDCWK*LT 823
M*LII +LQMI DCWK*LT
Sbjct: 671 M*LIIMMLQMIKDCWK*LT 727
Score = 34.5 bits (69), Expect(2) = 2e-087
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3 / +3
Query: 768 CD*SSRCFR**TIVGNS*H 824
CD*SS CFR** VGNS*H
Sbjct: 672 CD*SS*CFR**KTVGNS*H 728
Score = 34.1 bits (68), Expect(2) = 4e-092
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2 / -2
Query: 824 VLAISNNRLSSEAP**LVTSL 762
VLAISN+ LSSEA **LVTSL
Sbjct: 728 VLAISNSLLSSEAS**LVTSL 666
Score = 33.1 bits (66), Expect(3) = e-110
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2 / -3
Query: 185 RSSGGRDREAFAVAAPMKKKT 123
R RDREAFAVAAP++K T
Sbjct: 70 RGERERDREAFAVAAPVEKTT 8
Score = 30.9 bits (61), Expect(4) = e-117
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3 / +2
Query: 123 CFFLHRRGNSESFSVSPTAAP 185
C FL+R GN ESFS+S P
Sbjct: 8 CCFLYRSGNCESFSISLPLPP 70
Score = 29.9 bits (59), Expect(3) = 8e-095
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3 / +2
Query: 150 SESFSVSPTAAPPFGWFRALAA 215
S S + P A P GWFRALAA
Sbjct: 47 SISLPLPPAAPPLGGWFRALAA 112
Score = 27.2 bits (53), Expect(4) = 3e-098
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1 / -2
Query: 171 ERPRSFRCCRADEEKN 124
ER RSFR CR+ E N
Sbjct: 56 ERSRSFRSCRSGRENN 9
Score = 25.4 bits (49), Expect(4) = 3e-098
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3 / -1
Query: 214 AAKARNHPNGGAAVG 170
AAKARN P G A G
Sbjct: 111 AAKARNQPPNGGAAG 67
Score = 24.4 bits (47), Expect(4) = e-117
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2 / +1
Query: 191 WVVPRLGRA 217
W+VPRLGRA
Sbjct: 88 WLVPRLGRA 114
>gb|CW207479.1|CW207479 104_636_11188164_148_36970_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11188164, DNA
sequence
Length = 649
Score = 363 bits (787), Expect(2) = e-108
Identities = 151/168 (89%), Positives = 153/168 (91%)
Frame = +3 / +2
Query: 258 VSHRIPLDPAAERGTRRWIW**H*TASGISLILSRIMVPLCGFCGKQRSMIYCRSDAASL 437
VS RIPLD AAE+GT RW **H*TASGIS ILSRIM LC FCGKQRSMIYCRSDAASL
Sbjct: 29 VSRRIPLDSAAEQGTGRWN***H*TASGISQILSRIMASLCDFCGKQRSMIYCRSDAASL 208
Query: 438 CLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDNTSLCQNCDWNGHDAASGASG 617
CLSCDR+VHSANALSRRH RTLLCDRCG QPASVRCLEDN SLCQNCDWNGHDAASGASG
Sbjct: 209 CLSCDRNVHSANALSRRHTRTLLCDRCGSQPASVRCLEDNASLCQNCDWNGHDAASGASG 388
Query: 618 HKRQAINCYSGCPSSAELSRIWSFITDIPTVAAEPNYEDGLSMMTIDD 761
HKRQAINCYSGCPSSAELSRIWSFI DIPTV AEPN EDGLSMMTIDD
Sbjct: 389 HKRQAINCYSGCPSSAELSRIWSFIMDIPTVPAEPNCEDGLSMMTIDD 532
Score = 346 bits (750), Expect(2) = e-102
Identities = 144/168 (85%), Positives = 149/168 (88%)
Frame = -1 / -3
Query: 762 CHQLSSCLVHPHSWAQLLQSGYR**MTRFSKALLMMGTLSNSLWPAFYAQKPLMLHHAHS 583
CHQLSSCL+HPHSWAQ +QSGY **MTRF KALLMMGTLSNSL PAFYAQKPLMLHHAHS
Sbjct: 533 CHQLSSCLIHPHSWAQQVQSGYP**MTRFLKALLMMGTLSNSL*PAFYAQKPLMLHHAHS 354
Query: 582 NHSFGKVMCCPQDIGLMQAVNHNDHKEGSFYDAETVH*LNERYGRMISTMMPHPICSRSL 403
NHSFGKVM CPQDI LMQA NH+DHKEGS YDAET H*LNE YGRMISTMMPH ICSRSL
Sbjct: 353 NHSFGKVMHCPQDI*LMQAENHSDHKEGSLYDAETAH*LNEHYGRMISTMMPHLICSRSL 174
Query: 402 TFVSHRNHREEP*SWTVLEKFHSLFSATTKSTFWYPVQQLDPVESYAI 259
TFVSHRNH+E P*SWTV EKFH LFSAT STF PVQQL+PVESY I
Sbjct: 173 TFVSHRNHKERP*SWTVFEKFHLLFSATINSTFPCPVQQLNPVESYVI 30
Score = 323 bits (699), Expect(2) = 6e-093
Identities = 142/163 (87%), Positives = 150/163 (92%)
Frame = +2 / +1
Query: 275 TGSSC*TGYQKVDLVVALNSEWNFSNTVQDHGSSLWFLWETKVNDLLQIGCGIIVLIMRP 454
TG SC*TG+ KV+L+VALNS+WNFSNTVQDHG SL FLWETKVNDLLQI CGIIVLIMRP
Sbjct: 46 TGFSC*TGHGKVELIVALNSKWNFSNTVQDHGLSL*FLWETKVNDLLQIRCGIIVLIMRP 225
Query: 455 *RSFS*CTVSAS*KDPSL*SLWFTACISPMS*GQHITLPKL*LEWA*CSIRGFWA*KAGH 634
* SFS*C VSAS KDPSL*SLWF+ACIS MS*GQ ITLPKL*LEWA*CSIRGFWA*KAG+
Sbjct: 226 *CSFS*CAVSASYKDPSL*SLWFSACISQMS*GQCITLPKL*LEWA*CSIRGFWA*KAGY 405
Query: 635 KLLLRVPIISRAFENLVIYYRYPDCSS*AQL*GWTKHDDN**Q 763
KLLLRVPIISRAF+NLVIYY YPDC+ *AQL*GW KHDDN**Q
Sbjct: 406 KLLLRVPIISRAFKNLVIYYGYPDCTC*AQL*GWIKHDDN**Q 534
Score = 314 bits (680), Expect(2) = 5e-092
Identities = 143/168 (85%), Positives = 145/168 (86%)
Frame = -2 / -1
Query: 761 VINCHHA*SILIVGLSCYSRDIGNK*PDSRKLC**WAP*VTVYGLPFMPRSP*CCIMPIP 582
VINCHHA*SIL VGLS YSRDI NK*PDS KLC**WAP*VTVY LPFMPRSP*CCIMPIP
Sbjct: 532 VINCHHA*SILTVGLSRYSRDIHNK*PDS*KLC**WAP*VTVYSLPFMPRSP*CCIMPIP 353
Query: 581 ITVLAK*CVVLKTSD*CRL*TTTITKKGPSMTPRQCIS*MNATVA**AQ*CRIRSAVDH* 402
ITVLAK*C+VLKTSD*CRL TT ITKKGP MTPRQ IS*MN TVA**AQ*CRI SAVDH*
Sbjct: 352 ITVLAK*CIVLKTSD*CRLRTTAITKKGPCMTPRQRIS*MNITVA**AQ*CRI*SAVDH* 173
Query: 401 PLFPTETTERNHDPGQY*RNSTRCSVLLPNPPSGTPFSSWIQWNPMRY 258
PLFPTE T+R HDPGQY RNST CSVLL PPS FSS IQWNP Y
Sbjct: 172 PLFPTEITKRGHDPGQYLRNSTCCSVLLSIPPSRALFSS*IQWNPT*Y 29
Score = 309 bits (670), Expect(2) = 3e-087
Identities = 140/169 (82%), Positives = 144/169 (85%)
Frame = -3 / -2
Query: 763 LSSIVIMLSPSS*LGSAATVGISVINDQILESSADDGHPE*QFMACLLCPEAPDAASCPF 584
LSSIVIML+PSS LGSA TVGIS+INDQILESSADDGHPE*QF+ACLLCPEAPDAASCPF
Sbjct: 534 LSSIVIMLNPSSQLGSAGTVGISIINDQILESSADDGHPE*QFIACLLCPEAPDAASCPF 355
Query: 583 QSQFWQSDVLSSRHRTDAGCKPXXXXXXXXXXXRDSALAE*TLRSHDKHNDAASDLQ*II 404
QSQFWQSD LSSRH TDAG +P RDSALAE*TLRSHDKHNDAASDLQ*II
Sbjct: 354 QSQFWQSDALSSRHLTDAG*EPQRSQRRVLV*RRDSALAE*TLRSHDKHNDAASDLQ*II 175
Query: 403 DLCFPQKPQRGTMILDSIREIPLAVQCYYQIHLLVPRSAAGSSGILCDT 257
DLCFPQK QR MILDSI EIPLAVQCYYQ HL VP SAA SSGIL DT
Sbjct: 174 DLCFPQKSQREAMILDSI*EIPLAVQCYYQFHLPVPCSAAESSGILRDT 28
Score = 298 bits (645), Expect(2) = 3e-084
Identities = 131/168 (77%), Positives = 138/168 (82%)
Frame = +1 / +3
Query: 259 YRIGFHWIQLLNGVPEGGFGSSTEQRVEFL*YCPGSWFLSVVSVGNKGQ*STADRMRHHC 438
Y +GFHWIQLLN EGG SSTEQ+VEFL YCPGSW L V+SVGNKGQ*STAD+MRHHC
Sbjct: 30 YHVGFHWIQLLNRAREGGIDSSTEQQVEFLKYCPGSWPLFVISVGNKGQ*STADQMRHHC 209
Query: 439 AYHATVAFIQLMHCLGVIEGPFFVIVVVYSLHQSDVLRTTHHFAKTVIXXXXXXXXXXXX 618
AYHATV FIQLM CLGVI+GPFFVI VV SLHQSDVLRT HHFAKTVI
Sbjct: 210 AYHATVMFIQLMRCLGVIQGPFFVIAVVLSLHQSDVLRTMHHFAKTVIGMGMMQHQGLLG 389
Query: 619 IKGRP*TVTQGAHHQQSFRESGHLLPISRL*QLSPTMRMD*A**QLMT 762
IKGR *TVTQGAHHQQSF+ESGHLL ISRL LSPT+RMD*A**QLMT
Sbjct: 390 IKGRL*TVTQGAHHQQSFQESGHLLWISRLYLLSPTVRMD*A**QLMT 533
Score = 49.6 bits (102), Expect(2) = e-108
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 763 SDVTNHHGASDDKRLLEIANT 825
SDVTNHH ASDDKRLLEIANT
Sbjct: 533 SDVTNHHDASDDKRLLEIANT 595
Score = 48.3 bits (99), Expect(2) = e-102
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -3 / -3
Query: 823 C*LFPTIVYHLKHRDD*SHH 764
C*LFPT+ YHLKH DD*SHH
Sbjct: 593 C*LFPTVFYHLKHHDD*SHH 534
Score = 45.5 bits (93), Expect(2) = 5e-092
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -1 / -1
Query: 825 CVSYFQQSFII*STVMISHIT 763
CVSYFQQSFII*S +MISHIT
Sbjct: 595 CVSYFQQSFII*SIMMISHIT 533
Score = 40.0 bits (81), Expect(2) = 6e-093
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +2 / +3
Query: 764 VM*LIITVLQMINDCWK*LT 823
VM*LII +LQMI DCWK*LT
Sbjct: 534 VM*LIIMMLQMIKDCWK*LT 593
Score = 35.4 bits (71), Expect(2) = 3e-084
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +3 / +1
Query: 762 K*CD*SSRCFR**TIVGNS*H 824
+*CD*SS CFR** VGNS*H
Sbjct: 532 Q*CD*SS*CFR**KTVGNS*H 594
Score = 34.1 bits (68), Expect(2) = 3e-087
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2 / -2
Query: 824 VLAISNNRLSSEAP**LVTSL 762
VLAISN+ LSSEA **LVTSL
Sbjct: 594 VLAISNSLLSSEAS**LVTSL 532
>gb|CL184021.1|CL184021 104_397_10898570_116_32365_015 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10898570, DNA
sequence
Length = 674
Score = 363 bits (787), Expect(2) = e-105
Identities = 151/168 (89%), Positives = 153/168 (91%)
Frame = +3 / +3
Query: 258 VSHRIPLDPAAERGTRRWIW**H*TASGISLILSRIMVPLCGFCGKQRSMIYCRSDAASL 437
VS RIPLD AAE+GT RW **H*TASGIS ILSRIM LC FCGKQRSMIYCRSDAASL
Sbjct: 120 VSRRIPLDSAAEQGTGRWN***H*TASGISQILSRIMASLCDFCGKQRSMIYCRSDAASL 299
Query: 438 CLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDNTSLCQNCDWNGHDAASGASG 617
CLSCDR+VHSANALSRRH RTLLCDRCG QPASVRCLEDN SLCQNCDWNGHDAASGASG
Sbjct: 300 CLSCDRNVHSANALSRRHTRTLLCDRCGSQPASVRCLEDNASLCQNCDWNGHDAASGASG 479
Query: 618 HKRQAINCYSGCPSSAELSRIWSFITDIPTVAAEPNYEDGLSMMTIDD 761
HKRQAINCYSGCPSSAELSRIWSFI DIPTV AEPN EDGLSMMTIDD
Sbjct: 480 HKRQAINCYSGCPSSAELSRIWSFIMDIPTVPAEPNCEDGLSMMTIDD 623
Score = 346 bits (750), Expect(2) = 1e-099
Identities = 144/168 (85%), Positives = 149/168 (88%)
Frame = -1 / -3
Query: 762 CHQLSSCLVHPHSWAQLLQSGYR**MTRFSKALLMMGTLSNSLWPAFYAQKPLMLHHAHS 583
CHQLSSCL+HPHSWAQ +QSGY **MTRF KALLMMGTLSNSL PAFYAQKPLMLHHAHS
Sbjct: 624 CHQLSSCLIHPHSWAQQVQSGYP**MTRFLKALLMMGTLSNSL*PAFYAQKPLMLHHAHS 445
Query: 582 NHSFGKVMCCPQDIGLMQAVNHNDHKEGSFYDAETVH*LNERYGRMISTMMPHPICSRSL 403
NHSFGKVM CPQDI LMQA NH+DHKEGS YDAET H*LNE YGRMISTMMPH ICSRSL
Sbjct: 444 NHSFGKVMHCPQDI*LMQAENHSDHKEGSLYDAETAH*LNEHYGRMISTMMPHLICSRSL 265
Query: 402 TFVSHRNHREEP*SWTVLEKFHSLFSATTKSTFWYPVQQLDPVESYAI 259
TFVSHRNH+E P*SWTV EKFH LFSAT STF PVQQL+PVESY I
Sbjct: 264 TFVSHRNHKERP*SWTVFEKFHLLFSATINSTFPCPVQQLNPVESYVI 121
Score = 323 bits (699), Expect(2) = 6e-091
Identities = 142/163 (87%), Positives = 150/163 (92%)
Frame = +2 / +2
Query: 275 TGSSC*TGYQKVDLVVALNSEWNFSNTVQDHGSSLWFLWETKVNDLLQIGCGIIVLIMRP 454
TG SC*TG+ KV+L+VALNS+WNFSNTVQDHG SL FLWETKVNDLLQI CGIIVLIMRP
Sbjct: 137 TGFSC*TGHGKVELIVALNSKWNFSNTVQDHGLSL*FLWETKVNDLLQIRCGIIVLIMRP 316
Query: 455 *RSFS*CTVSAS*KDPSL*SLWFTACISPMS*GQHITLPKL*LEWA*CSIRGFWA*KAGH 634
* SFS*C VSAS KDPSL*SLWF+ACIS MS*GQ ITLPKL*LEWA*CSIRGFWA*KAG+
Sbjct: 317 *CSFS*CAVSASYKDPSL*SLWFSACISQMS*GQCITLPKL*LEWA*CSIRGFWA*KAGY 496
Query: 635 KLLLRVPIISRAFENLVIYYRYPDCSS*AQL*GWTKHDDN**Q 763
KLLLRVPIISRAF+NLVIYY YPDC+ *AQL*GW KHDDN**Q
Sbjct: 497 KLLLRVPIISRAFKNLVIYYGYPDCTC*AQL*GWIKHDDN**Q 625
Score = 314 bits (680), Expect(2) = 1e-088
Identities = 143/168 (85%), Positives = 145/168 (86%)
Frame = -2 / -1
Query: 761 VINCHHA*SILIVGLSCYSRDIGNK*PDSRKLC**WAP*VTVYGLPFMPRSP*CCIMPIP 582
VINCHHA*SIL VGLS YSRDI NK*PDS KLC**WAP*VTVY LPFMPRSP*CCIMPIP
Sbjct: 623 VINCHHA*SILTVGLSRYSRDIHNK*PDS*KLC**WAP*VTVYSLPFMPRSP*CCIMPIP 444
Query: 581 ITVLAK*CVVLKTSD*CRL*TTTITKKGPSMTPRQCIS*MNATVA**AQ*CRIRSAVDH* 402
ITVLAK*C+VLKTSD*CRL TT ITKKGP MTPRQ IS*MN TVA**AQ*CRI SAVDH*
Sbjct: 443 ITVLAK*CIVLKTSD*CRLRTTAITKKGPCMTPRQRIS*MNITVA**AQ*CRI*SAVDH* 264
Query: 401 PLFPTETTERNHDPGQY*RNSTRCSVLLPNPPSGTPFSSWIQWNPMRY 258
PLFPTE T+R HDPGQY RNST CSVLL PPS FSS IQWNP Y
Sbjct: 263 PLFPTEITKRGHDPGQYLRNSTCCSVLLSIPPSRALFSS*IQWNPT*Y 120
Score = 309 bits (670), Expect(2) = 5e-085
Identities = 140/169 (82%), Positives = 144/169 (85%)
Frame = -3 / -2
Query: 763 LSSIVIMLSPSS*LGSAATVGISVINDQILESSADDGHPE*QFMACLLCPEAPDAASCPF 584
LSSIVIML+PSS LGSA TVGIS+INDQILESSADDGHPE*QF+ACLLCPEAPDAASCPF
Sbjct: 625 LSSIVIMLNPSSQLGSAGTVGISIINDQILESSADDGHPE*QFIACLLCPEAPDAASCPF 446
Query: 583 QSQFWQSDVLSSRHRTDAGCKPXXXXXXXXXXXRDSALAE*TLRSHDKHNDAASDLQ*II 404
QSQFWQSD LSSRH TDAG +P RDSALAE*TLRSHDKHNDAASDLQ*II
Sbjct: 445 QSQFWQSDALSSRHLTDAG*EPQRSQRRVLV*RRDSALAE*TLRSHDKHNDAASDLQ*II 266
Query: 403 DLCFPQKPQRGTMILDSIREIPLAVQCYYQIHLLVPRSAAGSSGILCDT 257
DLCFPQK QR MILDSI EIPLAVQCYYQ HL VP SAA SSGIL DT
Sbjct: 265 DLCFPQKSQREAMILDSI*EIPLAVQCYYQFHLPVPCSAAESSGILRDT 119
Score = 298 bits (645), Expect(2) = 1e-081
Identities = 131/168 (77%), Positives = 138/168 (82%)
Frame = +1 / +1
Query: 259 YRIGFHWIQLLNGVPEGGFGSSTEQRVEFL*YCPGSWFLSVVSVGNKGQ*STADRMRHHC 438
Y +GFHWIQLLN EGG SSTEQ+VEFL YCPGSW L V+SVGNKGQ*STAD+MRHHC
Sbjct: 121 YHVGFHWIQLLNRAREGGIDSSTEQQVEFLKYCPGSWPLFVISVGNKGQ*STADQMRHHC 300
Query: 439 AYHATVAFIQLMHCLGVIEGPFFVIVVVYSLHQSDVLRTTHHFAKTVIXXXXXXXXXXXX 618
AYHATV FIQLM CLGVI+GPFFVI VV SLHQSDVLRT HHFAKTVI
Sbjct: 301 AYHATVMFIQLMRCLGVIQGPFFVIAVVLSLHQSDVLRTMHHFAKTVIGMGMMQHQGLLG 480
Query: 619 IKGRP*TVTQGAHHQQSFRESGHLLPISRL*QLSPTMRMD*A**QLMT 762
IKGR *TVTQGAHHQQSF+ESGHLL ISRL LSPT+RMD*A**QLMT
Sbjct: 481 IKGRL*TVTQGAHHQQSFQESGHLLWISRLYLLSPTVRMD*A**QLMT 624
Score = 40.9 bits (83), Expect(2) = e-105
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +1 / +3
Query: 763 SDVTNHHGASDDKRLLE 813
SDVTNHH ASDDKRLLE
Sbjct: 624 SDVTNHHDASDDKRLLE 674
Score = 39.1 bits (79), Expect(2) = 1e-099
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3 / -3
Query: 811 PTIVYHLKHRDD*SHH 764
PT+ YHLKH DD*SHH
Sbjct: 672 PTVFYHLKHHDD*SHH 625
Score = 34.5 bits (69), Expect(2) = 1e-088
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -1 / -1
Query: 813 FQQSFII*STVMISHIT 763
FQQSFII*S +MISHIT
Sbjct: 674 FQQSFII*SIMMISHIT 624
Score = 33.1 bits (66), Expect(2) = 6e-091
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2 / +1
Query: 764 VM*LIITVLQMINDCW 811
VM*LII +LQMI DCW
Sbjct: 625 VM*LIIMMLQMIKDCW 672
Score = 26.7 bits (52), Expect(2) = 1e-081
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3 / +2
Query: 762 K*CD*SSRCFR**TIVG 812
+*CD*SS CFR** VG
Sbjct: 623 Q*CD*SS*CFR**KTVG 673
Score = 26.7 bits (52), Expect(2) = 5e-085
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -2 / -2
Query: 812 SNNRLSSEAP**LVTSL 762
SN+ LSSEA **LVTSL
Sbjct: 673 SNSLLSSEAS**LVTSL 623
>gb|CW251131.1|CW251131 104_713_11223763_148_35058_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223763, DNA
sequence
Length = 703
Score = 292 bits (631), Expect(3) = 1e-096
Identities = 117/126 (92%), Positives = 118/126 (93%)
Frame = +3 / -2
Query: 384 FCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDNTS 563
F KQRSMIYCRSDAASLCLSCDR+VHSANALSRRH RTLLCDRCG QPASVRCLEDN S
Sbjct: 624 FLWKQRSMIYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCGSQPASVRCLEDNAS 445
Query: 564 LCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDIPTVAAEPNYEDGLS 743
LCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIWSFI DIPTV AEPN EDGLS
Sbjct: 444 LCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIWSFIMDIPTVPAEPNCEDGLS 265
Query: 744 MMTIDD 761
MMTIDD
Sbjct: 264 MMTIDD 247
Score = 265 bits (574), Expect(3) = 3e-089
Identities = 110/124 (88%), Positives = 113/124 (91%)
Frame = -1 / +3
Query: 762 CHQLSSCLVHPHSWAQLLQSGYR**MTRFSKALLMMGTLSNSLWPAFYAQKPLMLHHAHS 583
CHQLSSCL+HPHSWAQ +QSGY **MTRF KALLMMGTLSNSL PAFYAQKPLMLHHAHS
Sbjct: 246 CHQLSSCLIHPHSWAQQVQSGYP**MTRFLKALLMMGTLSNSL*PAFYAQKPLMLHHAHS 425
Query: 582 NHSFGKVMCCPQDIGLMQAVNHNDHKEGSFYDAETVH*LNERYGRMISTMMPHPICSRSL 403
NHSFGKVM CPQDI LMQA NH+DHKEGS YDAET H*LNE YGRMISTMMPH ICSRSL
Sbjct: 426 NHSFGKVMHCPQDI*LMQAENHSDHKEGSLYDAETAH*LNEHYGRMISTMMPHLICSRSL 605
Query: 402 TFVS 391
TFVS
Sbjct: 606 TFVS 617
Score = 249 bits (538), Expect(2) = 2e-072
Identities = 116/138 (84%), Positives = 119/138 (86%)
Frame = -2 / +1
Query: 761 VINCHHA*SILIVGLSCYSRDIGNK*PDSRKLC**WAP*VTVYGLPFMPRSP*CCIMPIP 582
VINCHHA*SIL VGLS YSRDI NK*PDS KLC**WAP*VTVY LPFMPRSP*CCIMPIP
Sbjct: 247 VINCHHA*SILTVGLSRYSRDIHNK*PDS*KLC**WAP*VTVYSLPFMPRSP*CCIMPIP 426
Query: 581 ITVLAK*CVVLKTSD*CRL*TTTITKKGPSMTPRQCIS*MNATVA**AQ*CRIRSAVDH* 402
ITVLAK*C+VLKTSD*CRL TT ITKKGP MTPRQ IS*MN TVA**AQ*CRI SAVDH*
Sbjct: 427 ITVLAK*CIVLKTSD*CRLRTTAITKKGPCMTPRQRIS*MNITVA**AQ*CRI*SAVDH* 606
Query: 401 PLFPTETTERNHDPGQY* 348
PLFP ++ GQY*
Sbjct: 607 PLFPQKSQREAMILGQY* 660
Score = 247 bits (534), Expect(3) = 2e-078
Identities = 111/124 (89%), Positives = 115/124 (92%)
Frame = +2 / -1
Query: 392 ETKVNDLLQIGCGIIVLIMRP*RSFS*CTVSAS*KDPSL*SLWFTACISPMS*GQHITLP 571
ETKVNDLLQI CGIIVLIMRP* SFS*C VSAS KDPSL*SLWF+ACIS MS*GQ ITLP
Sbjct: 616 ETKVNDLLQIRCGIIVLIMRP*CSFS*CAVSASYKDPSL*SLWFSACISQMS*GQCITLP 437
Query: 572 KL*LEWA*CSIRGFWA*KAGHKLLLRVPIISRAFENLVIYYRYPDCSS*AQL*GWTKHDD 751
KL*LEWA*CSIRGFWA*KAG+KLLLRVPIISRAF+NLVIYY YPDC+ *AQL*GW KHDD
Sbjct: 436 KL*LEWA*CSIRGFWA*KAGYKLLLRVPIISRAFKNLVIYYGYPDCTC*AQL*GWIKHDD 257
Query: 752 N**Q 763
N**Q
Sbjct: 256 N**Q 245
Score = 235 bits (507), Expect(2) = 8e-065
Identities = 107/140 (76%), Positives = 114/140 (81%)
Frame = -3 / +2
Query: 763 LSSIVIMLSPSS*LGSAATVGISVINDQILESSADDGHPE*QFMACLLCPEAPDAASCPF 584
LSSIVIML+PSS LGSA TVGIS+INDQILESSADDGHPE*QF+ACLLCPEAPDAASCPF
Sbjct: 245 LSSIVIMLNPSSQLGSAGTVGISIINDQILESSADDGHPE*QFIACLLCPEAPDAASCPF 424
Query: 583 QSQFWQSDVLSSRHRTDAGCKPXXXXXXXXXXXRDSALAE*TLRSHDKHNDAASDLQ*II 404
QSQFWQSD LSSRH TDAG +P RDSALAE*TLRSHDKHNDAASDLQ*II
Sbjct: 425 QSQFWQSDALSSRHLTDAG*EPQRSQRRVLV*RRDSALAE*TLRSHDKHNDAASDLQ*II 604
Query: 403 DLCFPQKPQRGTMILDSIRE 344
DLCF + + DSI +
Sbjct: 605 DLCFHRNHKERP*SWDSIEK 664
Score = 219 bits (473), Expect(3) = 2e-067
Identities = 99/124 (79%), Positives = 103/124 (83%)
Frame = +1 / -3
Query: 391 GNKGQ*STADRMRHHCAYHATVAFIQLMHCLGVIEGPFFVIVVVYSLHQSDVLRTTHHFA 570
GNKGQ*STAD+MRHHCAYHATV FIQLM CLGVI+GPFFVI VV SLHQSDVLRT HHFA
Sbjct: 617 GNKGQ*STADQMRHHCAYHATVMFIQLMRCLGVIQGPFFVIAVVLSLHQSDVLRTMHHFA 438
Query: 571 KTVIXXXXXXXXXXXXIKGRP*TVTQGAHHQQSFRESGHLLPISRL*QLSPTMRMD*A** 750
KTVI IKGR *TVTQGAHHQQSF+ESGHLL ISRL LSPT+RMD*A**
Sbjct: 437 KTVIGMGMMQHQGLLGIKGRL*TVTQGAHHQQSFQESGHLLWISRLYLLSPTVRMD*A** 258
Query: 751 QLMT 762
QLMT
Sbjct: 257 QLMT 246
Score = 55.6 bits (115), Expect(3) = 3e-089
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = -1 / +2
Query: 390 HRNHREEP*SWTVLEKFHSLFSATTKSTF 304
HRNH+E P*SW +EKFH LFSAT STF
Sbjct: 617 HRNHKERP*SWDSIEKFHVLFSATINSTF 703
Score = 53.3 bits (110), Expect(3) = 1e-096
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +2 / -2
Query: 305 KVDLVVALNSEWNFSNTVQDHGSSLWFLWETK 400
KV+L+VALNS WNFS QDHG SL FLW+ +
Sbjct: 702 KVELIVALNSTWNFSILSQDHGLSL*FLWKQR 607
Score = 49.6 bits (102), Expect(3) = 1e-096
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1 / -2
Query: 763 SDVTNHHGASDDKRLLEIANT 825
SDVTNHH ASDDKRLLEIANT
Sbjct: 246 SDVTNHHDASDDKRLLEIANT 184
Score = 48.3 bits (99), Expect(3) = 3e-089
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -3 / +3
Query: 823 C*LFPTIVYHLKHRDD*SHH 764
C*LFPT+ YHLKH DD*SHH
Sbjct: 186 C*LFPTVFYHLKHHDD*SHH 245
Score = 46.4 bits (95), Expect(3) = 2e-078
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = +1 / -1
Query: 304 EGGFGSSTEQRVEFL*YCPGSWFLSVVSVGNK 399
EGG SSTEQ VEFL PGSW L V+SV K
Sbjct: 703 EGGIDSSTEQHVEFLNTVPGSWPLFVISVETK 608
Score = 45.5 bits (93), Expect(2) = 2e-072
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -1 / +1
Query: 825 CVSYFQQSFII*STVMISHIT 763
CVSYFQQSFII*S +MISHIT
Sbjct: 184 CVSYFQQSFII*SIMMISHIT 246
Score = 41.4 bits (84), Expect(3) = 2e-067
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = +3 / -3
Query: 306 RWIW**H*TASGISLILSRIMVPLCGFCGKQ 398
RW **H*TA GIS RIM LC FCG +
Sbjct: 701 RWN***H*TARGISQYCPRIMASLCDFCGNK 609
Score = 40.0 bits (81), Expect(3) = 2e-078
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +2 / -3
Query: 764 VM*LIITVLQMINDCWK*LT 823
VM*LII +LQMI DCWK*LT
Sbjct: 245 VM*LIIMMLQMIKDCWK*LT 186
Score = 35.4 bits (71), Expect(3) = 2e-067
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +3 / -1
Query: 762 K*CD*SSRCFR**TIVGNS*H 824
+*CD*SS CFR** VGNS*H
Sbjct: 247 Q*CD*SS*CFR**KTVGNS*H 185
Score = 34.1 bits (68), Expect(2) = 8e-065
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2 / +2
Query: 824 VLAISNNRLSSEAP**LVTSL 762
VLAISN+ LSSEA **LVTSL
Sbjct: 185 VLAISNSLLSSEAS**LVTSL 247
>gb|BG412316.1|BG412316 OV2_40_D10.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 559
Score = 313 bits (678), Expect(3) = 1e-088
Identities = 129/145 (88%), Positives = 131/145 (90%)
Frame = +3 / +2
Query: 231 LRAAAPPRYVSHRIPLDPAAERGTRRWIW**H*TASGISLILSRIMVPLCGFCGKQRSMI 410
LR APPRYVS RIPLD AAE+GT RW **H*TASGIS ILSRIM LC FCGKQRSMI
Sbjct: 125 LRGEAPPRYVSRRIPLDSAAEQGTGRWN***H*TASGISQILSRIMASLCDFCGKQRSMI 304
Query: 411 YCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDNTSLCQNCDWNG 590
YCRSDAASLCLSCDR+VHSANALSRRH RTLLCDRCG QPASVRCLEDN SLCQNCDWNG
Sbjct: 305 YCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCGSQPASVRCLEDNASLCQNCDWNG 484
Query: 591 HDAASGASGHKRQAINCYSGCPSSA 665
HDAASGASGHKRQAINCYSGCPSSA
Sbjct: 485 HDAASGASGHKRQAINCYSGCPSSA 559
Score = 296 bits (641), Expect(2) = 2e-082
Identities = 128/163 (78%), Positives = 132/163 (80%)
Frame = -1 / -3
Query: 663 LMMGTLSNSLWPAFYAQKPLMLHHAHSNHSFGKVMCCPQDIGLMQAVNHNDHKEGSFYDA 484
LMMGTLSNSL PAFYAQKPLMLHHAHSNHSFGKVM CPQDI LMQA NH+DHKEGS YDA
Sbjct: 557 LMMGTLSNSL*PAFYAQKPLMLHHAHSNHSFGKVMHCPQDI*LMQAENHSDHKEGSLYDA 378
Query: 483 ETVH*LNERYGRMISTMMPHPICSRSLTFVSHRNHREEP*SWTVLEKFHSLFSATTKSTF 304
ET H*LNE YGRMISTMMPH ICSRSLTFVSHRNH+E P*SWTV EKFH LFSAT STF
Sbjct: 377 ETAH*LNEHYGRMISTMMPHLICSRSLTFVSHRNHKERP*SWTVFEKFHLLFSATINSTF 198
Query: 303 WYPVQQLDPVESYAIRIAAELLHGARIQPARPRRGTTQTAEQR 175
PVQQL+PVESY IRIAA LLHG R R + QR
Sbjct: 197 PCPVQQLNPVESYVIRIAAALLHGELGSDPRRRGQGAEPTTQR 69
Score = 271 bits (587), Expect = 8e-072
Identities = 125/165 (75%), Positives = 130/165 (78%)
Frame = -2 / -1
Query: 665 C**WAP*VTVYGLPFMPRSP*CCIMPIPITVLAK*CVVLKTSD*CRL*TTTITKKGPSMT 486
C**WAP*VTVY LPFMPRSP*CCIMPIPITVLAK*C+VLKTSD*CRL TT ITKKGP MT
Sbjct: 559 C**WAP*VTVYSLPFMPRSP*CCIMPIPITVLAK*CIVLKTSD*CRLRTTAITKKGPCMT 380
Query: 485 PRQCIS*MNATVA**AQ*CRIRSAVDH*PLFPTETTERNHDPGQY*RNSTRCSVLLPNPP 306
PRQ IS*MN TVA**AQ*CRI SAVDH*PLFPTE T+R HDPGQY RNST CSVLL PP
Sbjct: 379 PRQRIS*MNITVA**AQ*CRI*SAVDH*PLFPTEITKRGHDPGQYLRNSTCCSVLLSIPP 200
Query: 305 SGTPFSSWIQWNPMRYVSRRSCCTELGSNPRGQGAEPPKRRSSGG 171
S FSS IQWNP YVSRR TE R A+ + +GG
Sbjct: 199 SRALFSS*IQWNPT*YVSRRRFSTESSDPTRAGAAKARNQPPNGG 65
Score = 264 bits (572), Expect(4) = 2e-074
Identities = 117/144 (81%), Positives = 120/144 (83%)
Frame = -3 / -2
Query: 664 ADDGHPE*QFMACLLCPEAPDAASCPFQSQFWQSDVLSSRHRTDAGCKPXXXXXXXXXXX 485
ADDGHPE*QF+ACLLCPEAPDAASCPFQSQFWQSD LSSRH TDAG +P
Sbjct: 558 ADDGHPE*QFIACLLCPEAPDAASCPFQSQFWQSDALSSRHLTDAG*EPQRSQRRVLV*R 379
Query: 484 RDSALAE*TLRSHDKHNDAASDLQ*IIDLCFPQKPQRGTMILDSIREIPLAVQCYYQIHL 305
RDSALAE*TLRSHDKHNDAASDLQ*IIDLCFPQK QR MILDSI EIPLAVQCYYQ HL
Sbjct: 378 RDSALAE*TLRSHDKHNDAASDLQ*IIDLCFPQKSQREAMILDSI*EIPLAVQCYYQFHL 199
Query: 304 LVPRSAAGSSGILCDTYRGGAAAR 233
VP SAA SSGIL DTYRGGA+ R
Sbjct: 198 PVPCSAAESSGILRDTYRGGASPR 127
Score = 258 bits (558), Expect(2) = 1e-070
Identities = 109/144 (75%), Positives = 116/144 (80%)
Frame = +1 / +3
Query: 232 SVQQLRRDTYRIGFHWIQLLNGVPEGGFGSSTEQRVEFL*YCPGSWFLSVVSVGNKGQ*S 411
SV++ RRDTY +GFHWIQLLN EGG SSTEQ+VEFL YCPGSW L V+SVGNKGQ*S
Sbjct: 126 SVEKRRRDTYHVGFHWIQLLNRAREGGIDSSTEQQVEFLKYCPGSWPLFVISVGNKGQ*S 305
Query: 412 TADRMRHHCAYHATVAFIQLMHCLGVIEGPFFVIVVVYSLHQSDVLRTTHHFAKTVIXXX 591
TAD+MRHHCAYHATV FIQLM CLGVI+GPFFVI VV SLHQSDVLRT HHFAKTVI
Sbjct: 306 TADQMRHHCAYHATVMFIQLMRCLGVIQGPFFVIAVVLSLHQSDVLRTMHHFAKTVIGMG 485
Query: 592 XXXXXXXXXIKGRP*TVTQGAHHQ 663
IKGR *TVTQGAHHQ
Sbjct: 486 MMQHQGLLGIKGRL*TVTQGAHHQ 557
Score = 257 bits (555), Expect(2) = 2e-068
Identities = 114/130 (87%), Positives = 120/130 (92%)
Frame = +2 / +1
Query: 275 TGSSC*TGYQKVDLVVALNSEWNFSNTVQDHGSSLWFLWETKVNDLLQIGCGIIVLIMRP 454
TG SC*TG+ KV+L+VALNS+WNFSNTVQDHG SL FLWETKVNDLLQI CGIIVLIMRP
Sbjct: 169 TGFSC*TGHGKVELIVALNSKWNFSNTVQDHGLSL*FLWETKVNDLLQIRCGIIVLIMRP 348
Query: 455 *RSFS*CTVSAS*KDPSL*SLWFTACISPMS*GQHITLPKL*LEWA*CSIRGFWA*KAGH 634
* SFS*C VSAS KDPSL*SLWF+ACIS MS*GQ ITLPKL*LEWA*CSIRGFWA*KAG+
Sbjct: 349 *CSFS*CAVSASYKDPSL*SLWFSACISQMS*GQCITLPKL*LEWA*CSIRGFWA*KAGY 528
Query: 635 KLLLRVPIIS 664
KLLLRVPIIS
Sbjct: 529 KLLLRVPIIS 558
Score = 31.3 bits (62), Expect(2) = 2e-082
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / -3
Query: 185 RSSGGRDREAFAVAAPMKK 129
R RDREAFAVAAP++K
Sbjct: 59 RGERERDREAFAVAAPVEK 3
Score = 29.9 bits (59), Expect(2) = 1e-070
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3 / +3
Query: 150 SESFSVSPTAAPPFGWFRALAA 215
S S + P A P GWFRALAA
Sbjct: 36 SISLPLPPAAPPLGGWFRALAA 101
Score = 29.9 bits (59), Expect(3) = 1e-088
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / +3
Query: 129 FLHRRGNSESFSVSPTAAP 185
FL+R GNSESFS+S P
Sbjct: 3 FLYRSGNSESFSISLPLPP 59
Score = 29.0 bits (57), Expect(4) = 2e-074
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 171 ERPRSFRCCRADEE 130
ER RSFRCCR+ E
Sbjct: 45 ERSRSFRCCRSGRE 4
Score = 25.4 bits (49), Expect(4) = 2e-074
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3 / -1
Query: 214 AAKARNHPNGGAAVG 170
AAKARN P G A G
Sbjct: 100 AAKARNQPPNGGAAG 56
Score = 24.4 bits (47), Expect(3) = 1e-088
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2 / +2
Query: 191 WVVPRLGRA 217
W+VPRLGRA
Sbjct: 77 WLVPRLGRA 103
Score = 24.0 bits (46), Expect(2) = 2e-068
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2 / +2
Query: 128 FSSSARQQRKLLGLS 172
FS RQQRKLL LS
Sbjct: 2 FSLPERQQRKLLDLS 46
Score = 21.7 bits (41), Expect(4) = 2e-074
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3 / -1
Query: 241 AARSSDPTRAAKAR 200
+ SSDPTRA A+
Sbjct: 133 STESSDPTRAGAAK 92
>gb|BZ628064.1|BZ628064 ih57f05.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih57f05 5', DNA sequence
Length = 451
Score = 171 bits (369), Expect(2) = 5e-071
Identities = 68/85 (80%), Positives = 73/85 (85%)
Frame = +1 / +1
Query: 259 YRIGFHWIQLLNGVPEGGFGSSTEQRVEFL*YCPGSWFLSVVSVGNKGQ*STADRMRHHC 438
Y +GFHWIQLLN EGG SSTEQ+ EFL YCPGSW L V+SVGNKGQ*STAD+MRHHC
Sbjct: 52 YHVGFHWIQLLNRAREGGIDSSTEQQAEFLKYCPGSWPLFVISVGNKGQ*STADQMRHHC 231
Query: 439 AYHATVAFIQLMHCLGVIEGPFFVI 513
AYHATV FIQLM CLGVI+GPFFVI
Sbjct: 232 AYHATVMFIQLMRCLGVIQGPFFVI 306
Score = 167 bits (360), Expect(2) = 1e-065
Identities = 70/85 (82%), Positives = 72/85 (84%)
Frame = -1 / -2
Query: 513 DHKEGSFYDAETVH*LNERYGRMISTMMPHPICSRSLTFVSHRNHREEP*SWTVLEKFHS 334
DHKEGS YDAET H*LNE YGRMISTMMPH ICSRSLTFVSHRNH+E P*SWTV EKF
Sbjct: 306 DHKEGSLYDAETAH*LNEHYGRMISTMMPHLICSRSLTFVSHRNHKERP*SWTVFEKFRL 127
Query: 333 LFSATTKSTFWYPVQQLDPVESYAI 259
LFSAT STF PVQQL+PVESY I
Sbjct: 126 LFSATINSTFPCPVQQLNPVESYVI 52
Score = 167 bits (360), Expect(2) = 5e-061
Identities = 73/85 (85%), Positives = 75/85 (88%)
Frame = +3 / +3
Query: 258 VSHRIPLDPAAERGTRRWIW**H*TASGISLILSRIMVPLCGFCGKQRSMIYCRSDAASL 437
VS RIPLD AAE+GT RW **H*TASGIS ILSRIM LC FCGKQRSMIYCRSDAASL
Sbjct: 51 VSRRIPLDSAAEQGTGRWN***H*TASGISQILSRIMASLCDFCGKQRSMIYCRSDAASL 230
Query: 438 CLSCDRSVHSANALSRRHRRTLLCD 512
CLSCDR+VHSANALSRRH RTLLCD
Sbjct: 231 CLSCDRNVHSANALSRRHTRTLLCD 305
Score = 146 bits (314), Expect(2) = 1e-047
Identities = 67/80 (83%), Positives = 71/80 (88%)
Frame = +2 / +2
Query: 275 TGSSC*TGYQKVDLVVALNSEWNFSNTVQDHGSSLWFLWETKVNDLLQIGCGIIVLIMRP 454
TG SC*TG+ KV+L+VALNS+ NFSNTVQDHG SL FLWETKVNDLLQI CGIIVLIMRP
Sbjct: 68 TGFSC*TGHGKVELIVALNSKRNFSNTVQDHGLSL*FLWETKVNDLLQIRCGIIVLIMRP 247
Query: 455 *RSFS*CTVSAS*KDPSL*S 514
* SFS*C VSAS KDPSL*S
Sbjct: 248 *CSFS*CAVSASYKDPSL*S 307
Score = 145 bits (311), Expect(2) = 5e-057
Identities = 66/75 (88%), Positives = 66/75 (88%)
Frame = -3 / -1
Query: 481 DSALAE*TLRSHDKHNDAASDLQ*IIDLCFPQKPQRGTMILDSIREIPLAVQCYYQIHLL 302
DSALAE*TLRSHDKHNDAASDLQ*IIDLCFPQK QR MILDSI EIPLAVQCYYQ HL
Sbjct: 274 DSALAE*TLRSHDKHNDAASDLQ*IIDLCFPQKSQREAMILDSI*EIPLAVQCYYQFHLP 95
Query: 301 VPRSAAGSSGILCDT 257
VP SAA SSGIL DT
Sbjct: 94 VPCSAAESSGILRDT 50
Score = 144 bits (310), Expect(2) = 1e-056
Identities = 67/85 (78%), Positives = 68/85 (80%)
Frame = -2 / -3
Query: 512 ITKKGPSMTPRQCIS*MNATVA**AQ*CRIRSAVDH*PLFPTETTERNHDPGQY*RNSTR 333
ITKKGP MTPRQ IS*MN TVA**AQ*CRI SAVDH*PLFPTE T+R HDPGQY RNS
Sbjct: 305 ITKKGPCMTPRQRIS*MNITVA**AQ*CRI*SAVDH*PLFPTEITKRGHDPGQYLRNSAC 126
Query: 332 CSVLLPNPPSGTPFSSWIQWNPMRY 258
CSVLL PPS FSS IQWNP Y
Sbjct: 125 CSVLLSIPPSRALFSS*IQWNPT*Y 51
Score = 117 bits (251), Expect(2) = 5e-071
Identities = 43/47 (91%), Positives = 44/47 (93%)
Frame = +3 / +1
Query: 516 CGLQPASVRCLEDNTSLCQNCDWNGHDAASGASGHKRQAINCYSGCP 656
CG QPASVRCLEDN SLCQNCDWNGHDAASGASGHKR+AINCYS CP
Sbjct: 310 CGSQPASVRCLEDNASLCQNCDWNGHDAASGASGHKRKAINCYSRCP 450
Score = 104 bits (221), Expect(2) = 1e-065
Identities = 44/53 (83%), Positives = 46/53 (86%)
Frame = -2 / -2
Query: 656 WAP*VTVYGLPFMPRSP*CCIMPIPITVLAK*CVVLKTSD*CRL*TTTITKKG 498
WAP*VTVY LPFMPRSP*CCIMPIPITVLAK*C+VLKTSD*CRL K+G
Sbjct: 450 WAP*VTVYSLPFMPRSP*CCIMPIPITVLAK*CIVLKTSD*CRLRAAGDHKEG 292
Score = 97.7 bits (207), Expect(2) = 5e-057
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = -1 / -1
Query: 657 MGTLSNSLWPAFYAQKPLMLHHAHSNHSFGKVMCCPQDIGLMQA 526
MGTLSNSL P+FYAQKPLMLHHAHSNHSFGKVM CPQDI LMQA
Sbjct: 451 MGTLSNSL*PSFYAQKPLMLHHAHSNHSFGKVMHCPQDI*LMQA 320
Score = 96.8 bits (205), Expect(2) = 1e-056
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = -3 / -3
Query: 655 GHPE*QFMACLLCPEAPDAASCPFQSQFWQSDVLSSRHRTDAGCKP 518
GH E*QF+A LLCPEAPDAASCPFQSQFWQSD LSSRH TDAG +P
Sbjct: 449 GHLE*QFIAFLLCPEAPDAASCPFQSQFWQSDALSSRHLTDAG*EP 312
Score = 88.6 bits (187), Expect(2) = 5e-061
Identities = 39/47 (82%), Positives = 42/47 (89%)
Frame = +2 / +3
Query: 515 LWFTACISPMS*GQHITLPKL*LEWA*CSIRGFWA*KAGHKLLLRVP 655
L +ACIS MS*GQ ITLPKL*LEWA*CSIRGFWA*K G+KLLL+VP
Sbjct: 309 LRLSACISQMS*GQCITLPKL*LEWA*CSIRGFWA*KEGYKLLLKVP 449
Score = 64.8 bits (135), Expect(2) = 1e-047
Identities = 30/44 (68%), Positives = 30/44 (68%)
Frame = +1 / +2
Query: 526 SLHQSDVLRTTHHFAKTVIXXXXXXXXXXXXIKGRP*TVTQGAH 657
SLHQSDVLRT HHFAKTVI IKGR *TVTQGAH
Sbjct: 320 SLHQSDVLRTMHHFAKTVIGMGMMQHQGLLGIKGRL*TVTQGAH 451
>gb|CD208421.1|CD208421 HS1_37_D10.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_37_D10_A012 5', mRNA sequence
Length = 553
Score = 170 bits (365), Expect(3) = 1e-048
Identities = 76/106 (71%), Positives = 79/106 (74%)
Frame = -1 / -2
Query: 492 YDAETVH*LNERYGRMISTMMPHPICSRSLTFVSHRNHREEP*SWTVLEKFHSLFSATTK 313
YDAET H*LNE YGRMISTMMPH ICSRSLTFVSHRN +E P*SWTV EKFH LFSAT
Sbjct: 552 YDAETAH*LNEHYGRMISTMMPHLICSRSLTFVSHRNPKERP*SWTVFEKFHLLFSATIN 373
Query: 312 STFWYPVQQLDPVESYAIRIAAELLHGARIQPARPRRGTTQTAEQR 175
STF PVQQL+PVESY IRIAA LLHG R R + QR
Sbjct: 372 STFPCPVQQLNPVESYVIRIAAALLHGELGSDPRRRGQGAEPTTQR 235
Score = 168 bits (361), Expect(5) = 1e-050
Identities = 68/87 (78%), Positives = 74/87 (85%)
Frame = +1 / +1
Query: 232 SVQQLRRDTYRIGFHWIQLLNGVPEGGFGSSTEQRVEFL*YCPGSWFLSVVSVGNKGQ*S 411
SV++ RRDTY +GFHWIQLLN EGG SSTEQ+VEFL YCPGSW L +SVGNKGQ*S
Sbjct: 292 SVEKRRRDTYHVGFHWIQLLNRAREGGIDSSTEQQVEFLKYCPGSWPLFGISVGNKGQ*S 471
Query: 412 TADRMRHHCAYHATVAFIQLMHCLGVI 492
TAD+MRHHCAYHATV FIQLM CLGVI
Sbjct: 472 TADQMRHHCAYHATVMFIQLMRCLGVI 552
Score = 165 bits (355), Expect(4) = 8e-048
Identities = 73/87 (83%), Positives = 75/87 (86%)
Frame = +3 / +3
Query: 231 LRAAAPPRYVSHRIPLDPAAERGTRRWIW**H*TASGISLILSRIMVPLCGFCGKQRSMI 410
LR APPRYVS RIPLD AAE+GT RW **H*TASGIS ILSRIM L FCGKQRSMI
Sbjct: 291 LRGEAPPRYVSRRIPLDSAAEQGTGRWN***H*TASGISQILSRIMASLWDFCGKQRSMI 470
Query: 411 YCRSDAASLCLSCDRSVHSANALSRRH 491
YCRSDAASLCLSCDR+VHSANALSRRH
Sbjct: 471 YCRSDAASLCLSCDRNVHSANALSRRH 551
Score = 160 bits (344), Expect(4) = 2e-044
Identities = 72/83 (86%), Positives = 73/83 (87%)
Frame = -3 / -1
Query: 481 DSALAE*TLRSHDKHNDAASDLQ*IIDLCFPQKPQRGTMILDSIREIPLAVQCYYQIHLL 302
DSALAE*TLRSHDKHNDAASDLQ*IIDLCFPQK QR MILDSI EIPLAVQCYYQ HL
Sbjct: 541 DSALAE*TLRSHDKHNDAASDLQ*IIDLCFPQKSQREAMILDSI*EIPLAVQCYYQFHLP 362
Query: 301 VPRSAAGSSGILCDTYRGGAAAR 233
VP SAA SSGIL DTYRGGA+ R
Sbjct: 361 VPCSAAESSGILRDTYRGGASPR 293
Score = 146 bits (313), Expect = 5e-034
Identities = 71/107 (66%), Positives = 75/107 (70%)
Frame = -2 / -3
Query: 491 MTPRQCIS*MNATVA**AQ*CRIRSAVDH*PLFPTETTERNHDPGQY*RNSTRCSVLLPN 312
MTPRQ IS*MN TVA**AQ*CRI SAVDH*PLFPTE +R HDPGQY RNST CSVLL
Sbjct: 551 MTPRQRIS*MNITVA**AQ*CRI*SAVDH*PLFPTEIPKRGHDPGQYLRNSTCCSVLLSI 372
Query: 311 PPSGTPFSSWIQWNPMRYVSRRSCCTELGSNPRGQGAEPPKRRSSGG 171
PPS FSS IQWNP YVSRR TE R A+ + +GG
Sbjct: 371 PPSRALFSS*IQWNPT*YVSRRRFSTESSDPTRAGAAKARNQPPNGG 231
Score = 141 bits (303), Expect = 1e-032
Identities = 61/72 (84%), Positives = 65/72 (90%)
Frame = +2 / +2
Query: 275 TGSSC*TGYQKVDLVVALNSEWNFSNTVQDHGSSLWFLWETKVNDLLQIGCGIIVLIMRP 454
TG SC*TG+ KV+L+VALNS+WNFSNTVQDHG SL FLWETKVNDLLQI CGIIVLIMRP
Sbjct: 335 TGFSC*TGHGKVELIVALNSKWNFSNTVQDHGLSLGFLWETKVNDLLQIRCGIIVLIMRP 514
Query: 455 *RSFS*CTVSAS 490
* SFS*C VSAS
Sbjct: 515 *CSFS*CAVSAS 550
Score = 33.1 bits (66), Expect(3) = 1e-048
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2 / -2
Query: 185 RSSGGRDREAFAVAAPMKKKT 123
R RDREAFAVAAP++K T
Sbjct: 225 RGERERDREAFAVAAPVEKTT 163
Score = 31.8 bits (63), Expect(4) = 2e-044
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1 / -1
Query: 171 ERPRSFRCCRADEEKN 124
ER RSFRCCR+ E N
Sbjct: 211 ERSRSFRCCRSGRENN 164
Score = 29.9 bits (59), Expect(3) = 1e-048
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1 / -3
Query: 129 KNTASFCERRTRRRFCQHVVEQGSGLGG 46
K S RTRRRFCQHV + + G
Sbjct: 170 KQPPSARAERTRRRFCQHVEQGSASGSG 87
Score = 29.9 bits (59), Expect(4) = 8e-048
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3 / +1
Query: 150 SESFSVSPTAAPPFGWFRALAA 215
S S + P A P GWFRALAA
Sbjct: 202 SISLPLPPAAPPLGGWFRALAA 267
Score = 29.9 bits (59), Expect(5) = 1e-050
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 129 FLHRRGNSESFSVSPTAAP 185
FL+R GNSESFS+S P
Sbjct: 169 FLYRSGNSESFSISLPLPP 225
Score = 29.9 bits (59), Expect(5) = 1e-050
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2 / +1
Query: 71 TTCWQNLLLVLLSQKEAVFF 130
+TCWQNLLLVL + E F
Sbjct: 112 STCWQNLLLVLSALAEGGCF 171
Score = 28.1 bits (55), Expect(4) = 8e-048
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / +3
Query: 73 DVLAKPPPSP 102
DVLAKPPPSP
Sbjct: 114 DVLAKPPPSP 143
Score = 25.4 bits (49), Expect(4) = 2e-044
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3 / -3
Query: 214 AAKARNHPNGGAAVG 170
AAKARN P G A G
Sbjct: 266 AAKARNQPPNGGAAG 222
Score = 24.9 bits (48), Expect(4) = 8e-048
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2 / +3
Query: 104 LSQKEAVFFSSSARQQRKLLGLS 172
L + FS RQQRKLL LS
Sbjct: 144 LGSRRRRLFSLPERQQRKLLDLS 212
Score = 24.4 bits (47), Expect(5) = 1e-050
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2 / +3
Query: 191 WVVPRLGRA 217
W+VPRLGRA
Sbjct: 243 WLVPRLGRA 269
Score = 23.1 bits (44), Expect(5) = 1e-050
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2 / +1
Query: 47 PPRPDPCSTTC 79
PPRPDP + C
Sbjct: 79 PPRPDPDADPC 111
Score = 21.7 bits (41), Expect(4) = 2e-044
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3 / -3
Query: 241 AARSSDPTRAAKAR 200
+ SSDPTRA A+
Sbjct: 299 STESSDPTRAGAAK 258
>gb|CW232188.1|CW232188 104_681_11211528_148_37350_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11211528, DNA
sequence
Length = 712
Score = 163 bits (350), Expect(2) = 5e-048
Identities = 64/67 (95%), Positives = 64/67 (95%)
Frame = +3 / +1
Query: 561 SLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDIPTVAAEPNYEDGL 740
SLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIWSFI DIPTV AEPN EDGL
Sbjct: 1 SLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIWSFIMDIPTVPAEPNCEDGL 180
Query: 741 SMMTIDD 761
SMMTIDD
Sbjct: 181 SMMTIDD 201
Score = 150 bits (322), Expect(2) = 9e-044
Identities = 61/67 (91%), Positives = 63/67 (94%)
Frame = -1 / -1
Query: 762 CHQLSSCLVHPHSWAQLLQSGYR**MTRFSKALLMMGTLSNSLWPAFYAQKPLMLHHAHS 583
CHQLSSCL+HPHSWAQ +QSGY **MTRF KALLMMGTLSNSL PAFYAQKPLMLHHAHS
Sbjct: 202 CHQLSSCLIHPHSWAQQVQSGYP**MTRFLKALLMMGTLSNSL*PAFYAQKPLMLHHAHS 23
Query: 582 NHSFGKV 562
NHSFGKV
Sbjct: 22 NHSFGKV 2
Score = 149 bits (319), Expect(2) = 2e-042
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = -3 / -3
Query: 763 LSSIVIMLSPSS*LGSAATVGISVINDQILESSADDGHPE*QFMACLLCPEAPDAASCPF 584
LSSIVIML+PSS LGSA TVGIS+INDQILESSADDGHPE*QF+ACLLCPEAPDAASCPF
Sbjct: 203 LSSIVIMLNPSSQLGSAGTVGISIINDQILESSADDGHPE*QFIACLLCPEAPDAASCPF 24
Query: 583 QSQFWQS 563
QSQFWQS
Sbjct: 23 QSQFWQS 3
Score = 143 bits (307), Expect(2) = 3e-039
Identities = 61/67 (91%), Positives = 64/67 (95%)
Frame = +2 / +3
Query: 563 TLPKL*LEWA*CSIRGFWA*KAGHKLLLRVPIISRAFENLVIYYRYPDCSS*AQL*GWTK 742
TLPKL*LEWA*CSIRGFWA*KAG+KLLLRVPIISRAF+NLVIYY YPDC+ *AQL*GW K
Sbjct: 3 TLPKL*LEWA*CSIRGFWA*KAGYKLLLRVPIISRAFKNLVIYYGYPDCTC*AQL*GWIK 182
Query: 743 HDDN**Q 763
HDDN**Q
Sbjct: 183 HDDN**Q 203
Score = 140 bits (300), Expect(2) = 2e-036
Identities = 62/67 (92%), Positives = 62/67 (92%)
Frame = -2 / -2
Query: 761 VINCHHA*SILIVGLSCYSRDIGNK*PDSRKLC**WAP*VTVYGLPFMPRSP*CCIMPIP 582
VINCHHA*SIL VGLS YSRDI NK*PDS KLC**WAP*VTVY LPFMPRSP*CCIMPIP
Sbjct: 201 VINCHHA*SILTVGLSRYSRDIHNK*PDS*KLC**WAP*VTVYSLPFMPRSP*CCIMPIP 22
Query: 581 ITVLAK* 561
ITVLAK*
Sbjct: 21 ITVLAK* 1
Score = 98.7 bits (209), Expect(2) = 2e-024
Identities = 49/67 (73%), Positives = 51/67 (76%)
Frame = +1 / +2
Query: 562 HFAKTVIXXXXXXXXXXXXIKGRP*TVTQGAHHQQSFRESGHLLPISRL*QLSPTMRMD* 741
HFAKTVI IKGR *TVTQGAHHQQSF+ESGHLL ISRL LSPT+RMD*
Sbjct: 2 HFAKTVIGMGMMQHQGLLGIKGRL*TVTQGAHHQQSFQESGHLLWISRLYLLSPTVRMD* 181
Query: 742 A**QLMT 762
A**QLMT
Sbjct: 182 A**QLMT 202
Score = 49.6 bits (102), Expect(2) = 5e-048
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1 / +1
Query: 763 SDVTNHHGASDDKRLLEIANT 825
SDVTNHH ASDDKRLLEIANT
Sbjct: 202 SDVTNHHDASDDKRLLEIANT 264
Score = 48.3 bits (99), Expect(2) = 9e-044
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -3 / -1
Query: 823 C*LFPTIVYHLKHRDD*SHH 764
C*LFPT+ YHLKH DD*SHH
Sbjct: 262 C*LFPTVFYHLKHHDD*SHH 203
Score = 45.5 bits (93), Expect(2) = 2e-042
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -1 / -2
Query: 825 CVSYFQQSFII*STVMISHIT 763
CVSYFQQSFII*S +MISHIT
Sbjct: 264 CVSYFQQSFII*SIMMISHIT 202
Score = 40.0 bits (81), Expect(2) = 3e-039
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +2 / +2
Query: 764 VM*LIITVLQMINDCWK*LT 823
VM*LII +LQMI DCWK*LT
Sbjct: 203 VM*LIIMMLQMIKDCWK*LT 262
Score = 35.4 bits (71), Expect(2) = 2e-024
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +3 / +3
Query: 762 K*CD*SSRCFR**TIVGNS*H 824
+*CD*SS CFR** VGNS*H
Sbjct: 201 Q*CD*SS*CFR**KTVGNS*H 263
Score = 34.1 bits (68), Expect(2) = 2e-036
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2 / -3
Query: 824 VLAISNNRLSSEAP**LVTSL 762
VLAISN+ LSSEA **LVTSL
Sbjct: 263 VLAISNSLLSSEAS**LVTSL 201
>gb|CL170200.1|CL170200 104_370_10813622_116_31789_326 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10813622, DNA
sequence
Length = 593
Score = 105 bits (225), Expect = 6e-022
Identities = 41/101 (40%), Positives = 55/101 (54%)
Frame = +3 / -3
Query: 378 CGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDN 557
C +CG + +YCR+D+A LCL CDR VH AN + RH R LC C A R +
Sbjct: 561 CDYCGTAAAAVYCRADSARLCLPCDRLVHGANGVCSRHARAPLCADCRAAGAVFRRASSS 382
Query: 558 TSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRI 680
LC NCD+ H H R A+ YSGCP +++L+ +
Sbjct: 381 AFLCSNCDFGRHRDGGDPPLHDRCAVQPYSGCPPASDLAAL 259
>gb|CW276221.1|CW276221 104_749_11405372_148_35393_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405372, DNA
sequence
Length = 657
Score = 105 bits (225), Expect = 6e-022
Identities = 41/101 (40%), Positives = 55/101 (54%)
Frame = +3 / -1
Query: 378 CGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDN 557
C +CG + +YCR+D+A LCL CDR VH AN + RH R LC C A R +
Sbjct: 543 CDYCGTAAAAVYCRADSARLCLPCDRLVHGANGVCSRHARAPLCADCRAAGAVFRRASSS 364
Query: 558 TSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRI 680
LC NCD+ H H R A+ YSGCP +++L+ +
Sbjct: 363 AFLCSNCDFGRHRDGGDPPLHDRCAVQPYSGCPPASDLAAL 241
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,118,665,081
Number of Sequences: 832831
Number of extensions: 18287322
Number of successful extensions: 219350
Number of sequences better than 1.0e-020: 11
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 26139010040
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)