TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8010462.2.1
(638 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW482625.1|CW482625 fsbb001f242n03k0 Sorghum methylation... 95 1e-062
gb|CD226034.1|CD226034 CCC1_43_C09.b1_A007 Callus culture/c... 95 1e-062
gb|CD463381.1|CD463381 ETH1_44_H01.b1_A002 Ethylene-treated... 92 7e-058
gb|BG557612.1|BG557612 EM1_54_A03.g1_A002 Embryo 1 (EM1) So... 98 2e-053
gb|BG356009.2|BG356009 EM1_19_C06.g1_A002 Embryo 1 (EM1) So... 95 2e-051
gb|CL173775.1|CL173775 104_377_10891106_148_31792_242 Sorgh... 95 6e-048
gb|BF587927.1|BF587927 FM1_34_F02.g1_A003 Floral-Induced Me... 87 2e-045
gb|CL173774.1|CL173774 104_377_10891106_116_31793_242 Sorgh... 95 1e-043
gb|CW380095.1|CW380095 fsbb001f059l10k0 Sorghum methylation... 56 9e-042
gb|BE362449.1|BE362449 DG1_86_G01.g1_A002 Dark Grown 1 (DG1... 95 4e-039
gb|CW315423.1|CW315423 104_806_11472351_148_35827_056 Sorgh... 95 3e-038
gb|BG241551.1|BG241551 RHIZ2_17_A01.g1_A003 Rhizome2 (RHIZ2... 86 5e-038
gb|BG101760.1|BG101760 RHIZ2_21_A04.g1_A003 Rhizome2 (RHIZ2... 95 2e-035
gb|DN551872.1|DN551872 pSPR-RT-MR-H1_G04_C276 pSPR Sorghum ... 81 2e-027
gb|BG487962.1|BG487962 RHIZ2_61_D12.g1_A003 Rhizome2 (RHIZ2... 81 2e-027
gb|BG558058.1|BG558058 RHIZ2_66_B02.g1_A003 Rhizome2 (RHIZ2... 81 2e-027
gb|CL164480.1|CL164480 104_358_10807939_114_31814_307 Sorgh... 81 5e-027
gb|CW091315.1|CW091315 104_453_10998477_114_33030_093 Sorgh... 81 5e-027
gb|BE358396.1|BE358396 DG1_29_B04.g1_A002 Dark Grown 1 (DG1... 81 5e-027
gb|BE918444.1|BE918444 OV1_3_G09.g1_A002 Ovary 1 (OV1) Sorg... 81 5e-027
gb|BE358841.1|BE358841 DG1_32_D06.g1_A002 Dark Grown 1 (DG1... 81 5e-027
gb|CW176959.1|CW176959 104_590_11158763_148_36591_046 Sorgh... 81 5e-027
gb|BE364574.2|BE364574 PI1_15_H09.g1_A002 Pathogen induced ... 81 5e-027
gb|BE360494.1|BE360494 DG1_63_B03.g1_A002 Dark Grown 1 (DG1... 81 5e-027
gb|CW460987.1|CW460987 fsbb001f208h04k0 Sorghum methylation... 87 2e-026
gb|CW460986.1|CW460986 fsbb001f208h04f0 Sorghum methylation... 87 2e-026
gb|CW150733.1|CW150733 104_551_11143570_116_36314_043 Sorgh... 87 2e-026
gb|CW150734.1|CW150734 104_551_11143570_148_36313_043 Sorgh... 87 2e-026
gb|BF481310.1|BF481310 FM1_18_D04.g1_A003 Floral-Induced Me... 77 4e-026
gb|AW922566.1|AW922566 DG1_45_G07.g1_A002 Dark Grown 1 (DG1... 53 5e-025
gb|BE367374.1|BE367374 PI1_4_E12.g1_A002 Pathogen induced 1... 50 3e-023
gb|CW439402.1|CW439402 fsbb001f157i10k0 Sorghum methylation... 55 2e-022
gb|BE361256.1|BE361256 DG1_70_D10.g1_A002 Dark Grown 1 (DG1... 62 2e-022
gb|BG047939.1|BG047939 OV1_25_F09.g1_A002 Ovary 1 (OV1) Sor... 62 3e-022
gb|BG932956.1|BG932956 DG1_69_D11.g1_A002 Dark Grown 1 (DG1... 62 3e-022
gb|BG948233.1|BG948233 IP1_10_H11.g1_A002 Immature pannicle... 62 3e-022
gb|BE366341.1|BE366341 PI1_32_D08.g1_A002 Pathogen induced ... 62 3e-022
gb|BG102506.1|BG102506 RHIZ2_33_H09.g1_A003 Rhizome2 (RHIZ2... 62 3e-022
gb|BG948544.1|BG948544 IP1_10_H11.b1_A002 Immature pannicle... 62 3e-022
gb|BG047581.1|BG047581 OV1_25_F09.b1_A002 Ovary 1 (OV1) Sor... 62 3e-022
gb|AW677701.1|AW677701 WS1_10_H08.g1_A002 Water-stressed 1 ... 62 3e-022
gb|BE359207.1|BE359207 DG1_39_C05.g1_A002 Dark Grown 1 (DG1... 62 3e-022
gb|BG355763.2|BG355763 EM1_19_C06.b1_A002 Embryo 1 (EM1) So... 90 9e-022
gb|BG273178.1|BG273178 OV2_27_G08.g1_A002 Ovary 2 (OV2) Sor... 58 7e-021
>gb|CW482625.1|CW482625 fsbb001f242n03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f242n03, DNA
sequence
Length = 636
Score = 95.5 bits (202), Expect(6) = 8e-055
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +1 / -3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VESG PLVPNRI+ECRSYPLYRFVREEVGT+YLTGE+TRSP
Sbjct: 577 VESGNPLVPNRIKECRSYPLYRFVREEVGTQYLTGEKTRSP 455
Score = 91.3 bits (193), Expect(10) = 1e-062
Identities = 40/54 (74%), Positives = 40/54 (74%)
Frame = -1 / +3
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GDLV SPVRY VPTSSRTNRYSG*DRHSLILLGTRG PLST R A
Sbjct: 456 GDLVFSPVRYWVPTSSRTNRYSG*DRHSLILLGTRGLPLSTATRAASTSLGSAA 617
Score = 74.8 bits (157), Expect(7) = 2e-043
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = -3 / +2
Query: 177 AGQVLGADLLAHEPVQRVGPALPDPVGDQGXAALHG 70
AGQVLGADLLAHEPVQRVGPAL DPVG Q AALHG
Sbjct: 473 AGQVLGADLLAHEPVQRVGPALLDPVGHQRVAALHG 580
Score = 55.6 bits (115), Expect(6) = 8e-055
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +1 / -1
Query: 475 CCRVPAAATPWRATCAFLAVAAAETFDGF 561
CC +PAAATPW A FLAVAA ETFDGF
Sbjct: 159 CCVLPAAATPWPAMRMFLAVAATETFDGF 73
Score = 55.1 bits (114), Expect(10) = 1e-062
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -3 / +1
Query: 576 PAYRLKTIKSFSSCDSQERARRTPWRRSCG 487
P ++KTIKSFSSC+SQE A PWRRSCG
Sbjct: 58 PNLQVKTIKSFSSCNSQEHAHCRPWRRSCG 147
Score = 53.3 bits (110), Expect(6) = 8e-055
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
+DPLLECLKEWNG PLPLC*A
Sbjct: 406 VDPLLECLKEWNGEPLPLC*A 344
Score = 52.8 bits (109), Expect(8) = 2e-044
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +2 / -1
Query: 71 PWRAAXPWSPTGSGSAGPTRCTG 139
PWRAA W PTGS SAGPTRCTG
Sbjct: 579 PWRAATLWCPTGSRSAGPTRCTG 511
Score = 52.4 bits (108), Expect(8) = 2e-044
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +3 / -3
Query: 474 MLSCSRSCDAMACDVRVLGCRSC*NF*WF 560
+L SRSCDAMAC+ VLGC S *NF*WF
Sbjct: 160 LLCSSRSCDAMACNAHVLGCCSY*NF*WF 74
Score = 50.6 bits (104), Expect(6) = 8e-055
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +2 / -3
Query: 299 SAELS*AARTCSAQRRKKQKYSGSRQRFKIVYLQPD*QKMLSISTVALYY**LK 460
SA+ +R ++ K Q+ R + + +LQPD*QK+LSI TVALYY**LK
Sbjct: 334 SAQEQRRSRYTDRRKTKVQRLKTERFKIIVKFLQPD*QKILSIFTVALYY**LK 173
Score = 49.6 bits (102), Expect(10) = 1e-062
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -3 / +3
Query: 459 FSY**YKATVDIESIFC*SGCK 394
FSY**YKATV+IESIFC*SGCK
Sbjct: 174 FSY**YKATVNIESIFC*SGCK 239
Score = 49.2 bits (101), Expect(7) = 2e-043
Identities = 23/39 (58%), Positives = 25/39 (64%)
Frame = -2 / +3
Query: 592 IYFIPPSLQVKNHQKFQQLRQPRTRTSHAMASQLREHDN 476
I + P L NHQKFQ L+QPRT AMASQLRE N
Sbjct: 42 IIYFIPQLTS*NHQKFQ*LQQPRTCALQAMASQLREEHN 158
Score = 46.9 bits (96), Expect(7) = 2e-043
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / +3
Query: 308 AQQSGRGAPFHSLRHSSSGSMVL 240
AQQSG G+PFHSLRHSSSGS L
Sbjct: 345 AQQSGSGSPFHSLRHSSSGSTCL 413
Score = 46.4 bits (95), Expect(8) = 2e-044
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = +2 / -1
Query: 248 STRCSSASRSGTARPCRSAELS*AAR 325
STRCSSASRSGTA CRSAEL A R
Sbjct: 405 STRCSSASRSGTASHCRSAELRLAVR 328
Score = 46.0 bits (94), Expect(8) = 2e-044
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1 / -2
Query: 391 LFTTRLAEDALYIYRRLVLLVAEV 462
+FTTRLAED LYIYR LVLLVA+V
Sbjct: 242 VFTTRLAEDTLYIYRCLVLLVAKV 171
Score = 45.5 bits (93), Expect(10) = 1e-062
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3 / +2
Query: 327 VRAAQLSSAERQGRAVPLLEALEQRVD 247
+R A+ SSAERQ AVPLLEALEQRVD
Sbjct: 326 LRTARRSSAERQWLAVPLLEALEQRVD 406
Score = 44.1 bits (90), Expect(7) = 2e-043
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -2 / +2
Query: 472 HMNLLQLLIIQGDGRYREHLLLVWL* 395
H + L LL++QG+G+YRE+LLLVWL*
Sbjct: 161 HSHEL*LLVVQGNGKYREYLLLVWL* 238
Score = 33.6 bits (67), Expect(8) = 2e-044
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / -2
Query: 150 GGRHRVPDRREDQV 191
GGRH VPDRRED+V
Sbjct: 500 GGRHPVPDRREDEV 459
Score = 26.7 bits (52), Expect(10) = 1e-062
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / +2
Query: 226 GHEHLVELLAG 194
GH+HLV+LLAG
Sbjct: 425 GHQHLVQLLAG 457
Score = 26.7 bits (52), Expect(10) = 1e-062
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / +2
Query: 375 CLEPLYFCFFLLC 337
CLEPLYF F +C
Sbjct: 266 CLEPLYFGFSSIC 304
Score = 26.3 bits (51), Expect(10) = 1e-062
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / +3
Query: 49 LGXRARTCCSN 17
LG ARTCCSN
Sbjct: 603 LGSAARTCCSN 635
Score = 25.8 bits (50), Expect(6) = 8e-055
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / -1
Query: 195 PARSSTRCSWP 227
PARS TRC WP
Sbjct: 456 PARS*TRCWWP 424
Score = 25.4 bits (49), Expect(6) = 8e-055
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2 / -2
Query: 578 GDEVNYFVLQ 607
GD+VNYFVLQ
Sbjct: 59 GDKVNYFVLQ 30
Score = 24.0 bits (46), Expect(10) = 1e-062
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1 / +2
Query: 602 EQNNLLHPP 576
EQNNLL+PP
Sbjct: 35 EQNNLLYPP 61
Score = 23.5 bits (45), Expect(8) = 2e-044
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / -1
Query: 577 GG*SKLFCS 603
GG*SKLFCS
Sbjct: 60 GG*SKLFCS 34
Score = 22.6 bits (43), Expect(10) = 1e-062
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2 / +3
Query: 259 AAGRWCLRWLM 227
++G CLRWLM
Sbjct: 393 SSGSTCLRWLM 425
Score = 22.6 bits (43), Expect(8) = 2e-044
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / -1
Query: 338 QRRKKQKYSGSRQ 376
Q +K KYSGSRQ
Sbjct: 303 QIEEKPKYSGSRQ 265
Score = 22.6 bits (43), Expect(10) = 1e-062
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / +3
Query: 487 EHDNIHMN 464
EH+NIHMN
Sbjct: 150 EHNNIHMN 173
Score = 22.6 bits (43), Expect(7) = 2e-043
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +3
Query: 601 NKIIYFIP 578
NKIIYFIP
Sbjct: 36 NKIIYFIP 59
Score = 22.1 bits (42), Expect(7) = 2e-043
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / +1
Query: 224 PRAPC*APRR 195
P APC APRR
Sbjct: 427 PPAPCSAPRR 456
Score = 21.7 bits (41), Expect(7) = 2e-043
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2 / +2
Query: 391 NDLETLS*AAILLFFPSLC 335
NDLETL + F S+C
Sbjct: 248 NDLETLCLEPLYFGFSSIC 304
Score = 21.7 bits (41), Expect(8) = 2e-044
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 196 RRGAQQGARG 225
RRGA+QGA G
Sbjct: 455 RRGAEQGAGG 426
>gb|CD226034.1|CD226034 CCC1_43_C09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_43_C09_A007 3', mRNA sequence
Length = 614
Score = 95.5 bits (202), Expect(6) = 4e-054
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VESG PLVPNRI+ECRSYPLYRFVREEVGT+YLTGE+TRSP
Sbjct: 71 VESGNPLVPNRIKECRSYPLYRFVREEVGTQYLTGEKTRSP 193
Score = 93.2 bits (197), Expect(9) = 1e-062
Identities = 41/54 (75%), Positives = 41/54 (75%)
Frame = -1 / -3
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GDLV SPVRY VPTSSRTNRYSG*DRHSLILLGTRG PLST AR A
Sbjct: 192 GDLVFSPVRYWVPTSSRTNRYSG*DRHSLILLGTRGLPLSTAARAASTSLGSAA 31
Score = 74.8 bits (157), Expect(7) = 3e-044
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = -3 / -2
Query: 177 AGQVLGADLLAHEPVQRVGPALPDPVGDQGXAALHG 70
AGQVLGADLLAHEPVQRVGPAL DPVG Q AALHG
Sbjct: 175 AGQVLGADLLAHEPVQRVGPALLDPVGHQRVAALHG 68
Score = 55.6 bits (115), Expect(6) = 4e-054
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +1 / +3
Query: 475 CCRVPAAATPWRATCAFLAVAAAETFDGF 561
CC +PAAATPW A FLAVAA ETFDGF
Sbjct: 489 CCVLPAAATPWPAMRMFLAVAATETFDGF 575
Score = 55.1 bits (114), Expect(9) = 1e-062
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -3 / -1
Query: 576 PAYRLKTIKSFSSCDSQERARRTPWRRSCG 487
P ++KTIKSFSSC+SQE A PWRRSCG
Sbjct: 590 PNLQVKTIKSFSSCNSQEHAHCRPWRRSCG 501
Score = 53.3 bits (110), Expect(6) = 4e-054
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
+DPLLECLKEWNG PLPLC*A
Sbjct: 242 VDPLLECLKEWNGEPLPLC*A 304
Score = 52.8 bits (109), Expect(7) = 8e-042
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +2 / +3
Query: 71 PWRAAXPWSPTGSGSAGPTRCTG 139
PWRAA W PTGS SAGPTRCTG
Sbjct: 69 PWRAATLWCPTGSRSAGPTRCTG 137
Score = 52.4 bits (108), Expect(7) = 8e-042
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +3 / +2
Query: 474 MLSCSRSCDAMACDVRVLGCRSC*NF*WF 560
+L SRSCDAMAC+ VLGC S *NF*WF
Sbjct: 488 LLCSSRSCDAMACNAHVLGCCSY*NF*WF 574
Score = 50.6 bits (104), Expect(6) = 4e-054
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +2 / +2
Query: 299 SAELS*AARTCSAQRRKKQKYSGSRQRFKIVYLQPD*QKMLSISTVALYY**LK 460
SA+ +R ++ K Q+ R + + +LQPD*QK+LSI TVALYY**LK
Sbjct: 314 SAQEQRRSRYTDRRKTKVQRLKTERFKIIVKFLQPD*QKILSIFTVALYY**LK 475
Score = 49.6 bits (102), Expect(9) = 1e-062
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -3 / -3
Query: 459 FSY**YKATVDIESIFC*SGCK 394
FSY**YKATV+IESIFC*SGCK
Sbjct: 474 FSY**YKATVNIESIFC*SGCK 409
Score = 49.2 bits (101), Expect(7) = 3e-044
Identities = 23/39 (58%), Positives = 25/39 (64%)
Frame = -2 / -3
Query: 592 IYFIPPSLQVKNHQKFQQLRQPRTRTSHAMASQLREHDN 476
I + P L NHQKFQ L+QPRT AMASQLRE N
Sbjct: 606 IIYFIPQLTS*NHQKFQ*LQQPRTCALQAMASQLREEHN 490
Score = 47.8 bits (98), Expect(4) = 1e-020
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +2 / +1
Query: 485 FPQLRRHGVRRARSWLSQLLKLLMV 559
FPQLRRHG++ A SWL QLLKLLMV
Sbjct: 499 FPQLRRHGLQCACSWLLQLLKLLMV 573
Score = 46.9 bits (96), Expect(7) = 3e-044
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -3
Query: 308 AQQSGRGAPFHSLRHSSSGSMVL 240
AQQSG G+PFHSLRHSSSGS L
Sbjct: 303 AQQSGSGSPFHSLRHSSSGSTCL 235
Score = 46.4 bits (95), Expect(7) = 8e-042
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = +2 / +3
Query: 248 STRCSSASRSGTARPCRSAELS*AAR 325
STRCSSASRSGTA CRSAEL A R
Sbjct: 243 STRCSSASRSGTASHCRSAELRLAVR 320
Score = 46.0 bits (94), Expect(7) = 8e-042
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1 / +1
Query: 391 LFTTRLAEDALYIYRRLVLLVAEV 462
+FTTRLAED LYIYR LVLLVA+V
Sbjct: 406 VFTTRLAEDTLYIYRCLVLLVAKV 477
Score = 45.5 bits (93), Expect(9) = 1e-062
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3 / -2
Query: 327 VRAAQLSSAERQGRAVPLLEALEQRVD 247
+R A+ SSAERQ AVPLLEALEQRVD
Sbjct: 322 LRTARRSSAERQWLAVPLLEALEQRVD 242
Score = 45.1 bits (92), Expect(4) = 1e-020
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +3 / +1
Query: 249 RPAARVPQGVERRAPAALLSSA 314
RPAARVPQGVERRA AALLS A
Sbjct: 244 RPAARVPQGVERRATAALLSCA 309
Score = 44.1 bits (90), Expect(7) = 3e-044
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -2 / -2
Query: 472 HMNLLQLLIIQGDGRYREHLLLVWL* 395
H + L LL++QG+G+YRE+LLLVWL*
Sbjct: 487 HSHEL*LLVVQGNGKYREYLLLVWL* 410
Score = 42.3 bits (86), Expect(4) = 1e-020
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3 / +3
Query: 396 YNQTSRRCSLYLPSPCIISS*S 461
YNQTSRR SLYLP PC SS*S
Sbjct: 411 YNQTSRRYSLYLPLPCTTSS*S 476
Score = 34.1 bits (68), Expect(9) = 1e-062
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2 / -3
Query: 49 LGXRARTCCSNSATL 5
LG ARTCCSNSATL
Sbjct: 45 LGSAARTCCSNSATL 1
Score = 33.6 bits (67), Expect(7) = 8e-042
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / +1
Query: 150 GGRHRVPDRREDQV 191
GGRH VPDRRED+V
Sbjct: 148 GGRHPVPDRREDEV 189
Score = 26.7 bits (52), Expect(9) = 1e-062
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / -2
Query: 226 GHEHLVELLAG 194
GH+HLV+LLAG
Sbjct: 223 GHQHLVQLLAG 191
Score = 26.7 bits (52), Expect(9) = 1e-062
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / -2
Query: 375 CLEPLYFCFFLLC 337
CLEPLYF F +C
Sbjct: 382 CLEPLYFGFSSIC 344
Score = 25.8 bits (50), Expect(6) = 4e-054
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 195 PARSSTRCSWP 227
PARS TRC WP
Sbjct: 192 PARS*TRCWWP 224
Score = 25.4 bits (49), Expect(7) = 3e-044
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / -2
Query: 35 ADLLLELGHL 6
ADLLLELGHL
Sbjct: 31 ADLLLELGHL 2
Score = 22.6 bits (43), Expect(9) = 1e-062
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2 / -3
Query: 259 AAGRWCLRWLM 227
++G CLRWLM
Sbjct: 255 SSGSTCLRWLM 223
Score = 22.6 bits (43), Expect(7) = 8e-042
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 338 QRRKKQKYSGSRQ 376
Q +K KYSGSRQ
Sbjct: 345 QIEEKPKYSGSRQ 383
Score = 22.6 bits (43), Expect(9) = 1e-062
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / -3
Query: 487 EHDNIHMN 464
EH+NIHMN
Sbjct: 498 EHNNIHMN 475
Score = 22.6 bits (43), Expect(6) = 4e-054
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / +2
Query: 6 KVAEFEQQV 32
KVAEFEQQV
Sbjct: 2 KVAEFEQQV 28
Score = 22.1 bits (42), Expect(7) = 3e-044
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -1
Query: 224 PRAPC*APRR 195
P APC APRR
Sbjct: 221 PPAPCSAPRR 192
Score = 21.7 bits (41), Expect(7) = 3e-044
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2 / -2
Query: 391 NDLETLS*AAILLFFPSLC 335
NDLETL + F S+C
Sbjct: 400 NDLETLCLEPLYFGFSSIC 344
Score = 21.7 bits (41), Expect(4) = 1e-020
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +2
Query: 200 EELNKVLVA 226
EELNKVLVA
Sbjct: 197 EELNKVLVA 223
Score = 21.7 bits (41), Expect(7) = 8e-042
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 196 RRGAQQGARG 225
RRGA+QGA G
Sbjct: 193 RRGAEQGAGG 222
>gb|CD463381.1|CD463381 ETH1_44_H01.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_44_H01_A002 3', mRNA sequence
Length = 633
Score = 91.8 bits (194), Expect(6) = 9e-054
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VESG PLV NRI+ECRSYPLYRFVREEVGT+YLTGE+TRSP
Sbjct: 30 VESGNPLVSNRIKECRSYPLYRFVREEVGTQYLTGEKTRSP 152
Score = 89.0 bits (188), Expect(9) = 7e-058
Identities = 39/44 (88%), Positives = 39/44 (88%)
Frame = -1 / -3
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXAR 63
GDLV SPVRY VPTSSRTNRYSG*DRHSLILL TRG PLST AR
Sbjct: 151 GDLVFSPVRYWVPTSSRTNRYSG*DRHSLILLDTRGLPLSTGAR 20
Score = 74.8 bits (157), Expect(7) = 2e-043
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = -3 / -2
Query: 177 AGQVLGADLLAHEPVQRVGPALPDPVGDQGXAALHG 70
AGQVLGADLLAHEPVQRVGPAL DPVG Q AALHG
Sbjct: 134 AGQVLGADLLAHEPVQRVGPALLDPVGHQRVAALHG 27
Score = 55.6 bits (115), Expect(6) = 9e-054
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +1 / +1
Query: 475 CCRVPAAATPWRATCAFLAVAAAETFDGF 561
CC +PAAATPW A FLAVAA ETFDGF
Sbjct: 448 CCVLPAAATPWPAMRMFLAVAATETFDGF 534
Score = 55.1 bits (114), Expect(9) = 7e-058
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -3 / -1
Query: 576 PAYRLKTIKSFSSCDSQERARRTPWRRSCG 487
P ++KTIKSFSSC+SQE A PWRRSCG
Sbjct: 549 PNLQVKTIKSFSSCNSQEHAHCRPWRRSCG 460
Score = 53.3 bits (110), Expect(6) = 9e-054
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
+DPLLECLKEWNG PLPLC*A
Sbjct: 201 VDPLLECLKEWNGEPLPLC*A 263
Score = 52.8 bits (109), Expect(8) = 6e-044
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +2 / +1
Query: 71 PWRAAXPWSPTGSGSAGPTRCTG 139
PWRAA W PTGS SAGPTRCTG
Sbjct: 28 PWRAATLWCPTGSRSAGPTRCTG 96
Score = 52.4 bits (108), Expect(8) = 6e-044
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +3 / +3
Query: 474 MLSCSRSCDAMACDVRVLGCRSC*NF*WF 560
+L SRSCDAMAC+ VLGC S *NF*WF
Sbjct: 447 LLCSSRSCDAMACNAHVLGCCSY*NF*WF 533
Score = 50.6 bits (104), Expect(6) = 9e-054
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +2 / +3
Query: 299 SAELS*AARTCSAQRRKKQKYSGSRQRFKIVYLQPD*QKMLSISTVALYY**LK 460
SA+ +R ++ K Q+ R + + +LQPD*QK+LSI TVALYY**LK
Sbjct: 273 SAQEQRRSRYTDRRKTKVQRLKTERFKIIVKFLQPD*QKILSIFTVALYY**LK 434
Score = 49.6 bits (102), Expect(9) = 7e-058
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -3 / -3
Query: 459 FSY**YKATVDIESIFC*SGCK 394
FSY**YKATV+IESIFC*SGCK
Sbjct: 433 FSY**YKATVNIESIFC*SGCK 368
Score = 49.2 bits (101), Expect(7) = 2e-043
Identities = 23/39 (58%), Positives = 25/39 (64%)
Frame = -2 / -3
Query: 592 IYFIPPSLQVKNHQKFQQLRQPRTRTSHAMASQLREHDN 476
I + P L NHQKFQ L+QPRT AMASQLRE N
Sbjct: 565 IIYFIPQLTS*NHQKFQ*LQQPRTCALQAMASQLREEHN 449
Score = 46.9 bits (96), Expect(7) = 2e-043
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -3
Query: 308 AQQSGRGAPFHSLRHSSSGSMVL 240
AQQSG G+PFHSLRHSSSGS L
Sbjct: 262 AQQSGSGSPFHSLRHSSSGSTCL 194
Score = 46.0 bits (94), Expect(8) = 6e-044
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1 / +2
Query: 391 LFTTRLAEDALYIYRRLVLLVAEV 462
+FTTRLAED LYIYR LVLLVA+V
Sbjct: 365 VFTTRLAEDTLYIYRCLVLLVAKV 436
Score = 45.1 bits (92), Expect(8) = 6e-044
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +3 / +2
Query: 249 RPAARVPQGVERRAPAALLSSA 314
RPAARVPQGVERRA AALLS A
Sbjct: 203 RPAARVPQGVERRATAALLSCA 268
Score = 44.1 bits (90), Expect(7) = 2e-043
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -2 / -2
Query: 472 HMNLLQLLIIQGDGRYREHLLLVWL* 395
H + L LL++QG+G+YRE+LLLVWL*
Sbjct: 446 HSHEL*LLVVQGNGKYREYLLLVWL* 369
Score = 43.7 bits (89), Expect(9) = 7e-058
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = -3 / -2
Query: 327 VRAAQLSSAERQGRAVPLLEALEQRVD 247
+R A+ SS ERQ AVPLLEALEQRVD
Sbjct: 281 LRTARRSSTERQWLAVPLLEALEQRVD 201
Score = 33.6 bits (67), Expect(8) = 6e-044
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / +2
Query: 150 GGRHRVPDRREDQV 191
GGRH VPDRRED+V
Sbjct: 107 GGRHPVPDRREDEV 148
Score = 26.7 bits (52), Expect(9) = 7e-058
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / -2
Query: 226 GHEHLVELLAG 194
GH+HLV+LLAG
Sbjct: 182 GHQHLVQLLAG 150
Score = 26.7 bits (52), Expect(9) = 7e-058
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / -2
Query: 375 CLEPLYFCFFLLC 337
CLEPLYF F +C
Sbjct: 341 CLEPLYFGFSSIC 303
Score = 25.8 bits (50), Expect(6) = 9e-054
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 195 PARSSTRCSWP 227
PARS TRC WP
Sbjct: 151 PARS*TRCWWP 183
Score = 25.4 bits (49), Expect(6) = 9e-054
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2 / +2
Query: 578 GDEVNYFVLQ 607
GD+VNYFVLQ
Sbjct: 548 GDKVNYFVLQ 577
Score = 24.0 bits (46), Expect(9) = 7e-058
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1 / -2
Query: 602 EQNNLLHPP 576
EQNNLL+PP
Sbjct: 572 EQNNLLYPP 546
Score = 23.5 bits (45), Expect(8) = 6e-044
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +1
Query: 577 GG*SKLFCS 603
GG*SKLFCS
Sbjct: 547 GG*SKLFCS 573
Score = 22.6 bits (43), Expect(9) = 7e-058
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2 / -3
Query: 259 AAGRWCLRWLM 227
++G CLRWLM
Sbjct: 214 SSGSTCLRWLM 182
Score = 22.6 bits (43), Expect(8) = 6e-044
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 338 QRRKKQKYSGSRQ 376
Q +K KYSGSRQ
Sbjct: 304 QIEEKPKYSGSRQ 342
Score = 22.6 bits (43), Expect(9) = 7e-058
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / -3
Query: 487 EHDNIHMN 464
EH+NIHMN
Sbjct: 457 EHNNIHMN 434
Score = 22.6 bits (43), Expect(7) = 2e-043
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / -3
Query: 601 NKIIYFIP 578
NKIIYFIP
Sbjct: 571 NKIIYFIP 548
Score = 22.1 bits (42), Expect(7) = 2e-043
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -1
Query: 224 PRAPC*APRR 195
P APC APRR
Sbjct: 180 PPAPCSAPRR 151
Score = 21.7 bits (41), Expect(7) = 2e-043
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2 / -2
Query: 391 NDLETLS*AAILLFFPSLC 335
NDLETL + F S+C
Sbjct: 359 NDLETLCLEPLYFGFSSIC 303
Score = 21.7 bits (41), Expect(8) = 6e-044
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +2
Query: 196 RRGAQQGARG 225
RRGA+QGA G
Sbjct: 152 RRGAEQGAGG 181
>gb|BG557612.1|BG557612 EM1_54_A03.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 508
Score = 97.7 bits (207), Expect(6) = 2e-053
Identities = 42/61 (68%), Positives = 46/61 (75%)
Frame = -3 / -2
Query: 576 PAYRLKTIKSFSSCDSQERARRTPWRRSCGNXXXXXXTYFSY**YKATVDIESIFC*SGC 397
P ++KTIKSFSSC+SQE A PWRRSCG FSY**YKATV+IESIFC*SGC
Sbjct: 507 PNLQVKTIKSFSSCNSQEHAHCRPWRRSCGEEHNNIHMNFSY**YKATVNIESIFC*SGC 328
Query: 396 K 394
K
Sbjct: 327 K 325
Score = 87.2 bits (184), Expect(5) = 2e-050
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = +1 / +2
Query: 88 PLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
PLVPNRI+ECRSYPLYRFVREEVGT+YLTGE+TRSP
Sbjct: 2 PLVPNRIKECRSYPLYRFVREEVGTQYLTGEKTRSP 109
Score = 86.8 bits (183), Expect(5) = 3e-037
Identities = 45/87 (51%), Positives = 56/87 (64%)
Frame = +2 / +2
Query: 299 SAELS*AARTCSAQRRKKQKYSGSRQRFKIVYLQPD*QKMLSISTVALYY**LKXXXXXX 478
SA+ +R ++ K Q+ R + + +LQPD*QK+LSI TVALYY**LK
Sbjct: 230 SAQEQRRSRYTDRRKTKVQRLKTERFKIIVKFLQPD*QKILSIFTVALYY**LKFM*MLL 409
Query: 479 XXFPQLRRHGVRRARSWLSQLLKLLMV 559
PQLRRHG++ A SWL QLLKLLMV
Sbjct: 410 CSSPQLRRHGLQCACSWLLQLLKLLMV 490
Score = 84.9 bits (179), Expect(5) = 2e-050
Identities = 40/57 (70%), Positives = 42/57 (73%)
Frame = +1 / +1
Query: 391 LFTTRLAEDALYIYRRLVLLVAEVSSCECCRVPAAATPWRATCAFLAVAAAETFDGF 561
+FTTRLAED LYIYR LVLLVA+V PAAATPW A FLAVAA ETFDGF
Sbjct: 322 VFTTRLAEDTLYIYRCLVLLVAKVHVNVVVFFPAAATPWPAMRMFLAVAATETFDGF 492
Score = 81.7 bits (172), Expect(3) = 3e-023
Identities = 37/55 (67%), Positives = 38/55 (69%)
Frame = +3 / +3
Query: 396 YNQTSRRCSLYLPSPCIISS*SKFM*MLSCSRSCDAMACDVRVLGCRSC*NF*WF 560
YNQTSRR SLYLP PC SS*S RSCDAMAC+ VLGC S *NF*WF
Sbjct: 327 YNQTSRRYSLYLPLPCTTSS*SSCECCCVLPRSCDAMACNAHVLGCCSY*NF*WF 491
Score = 81.7 bits (172), Expect(5) = 1e-039
Identities = 37/61 (60%), Positives = 44/61 (72%)
Frame = -2 / -1
Query: 577 PSLQVKNHQKFQQLRQPRTRTSHAMASQLREHDNIHMNLLQLLIIQGDGRYREHLLLVWL 398
P L NHQKFQ L+QPRT AMASQLR H + L LL++QG+G+YRE+LLLVWL
Sbjct: 508 PQLTS*NHQKFQ*LQQPRTCALQAMASQLRGRTQQHSHEL*LLVVQGNGKYREYLLLVWL 329
Query: 397 * 395
*
Sbjct: 328 * 326
Score = 79.9 bits (168), Expect(6) = 2e-053
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = -1 / -2
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRG 87
GDLV SPVRY VPTSSRTNRYSG*DRHSLILLGTRG
Sbjct: 108 GDLVFSPVRYWVPTSSRTNRYSG*DRHSLILLGTRG 1
Score = 64.3 bits (134), Expect(5) = 1e-039
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = -3 / -1
Query: 177 AGQVLGADLLAHEPVQRVGPALPDPVGDQ 91
AGQVLGADLLAHEPVQRVGPAL DPVG Q
Sbjct: 91 AGQVLGADLLAHEPVQRVGPALLDPVGHQ 5
Score = 53.3 bits (110), Expect(5) = 2e-050
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
+DPLLECLKEWNG PLPLC*A
Sbjct: 158 VDPLLECLKEWNGEPLPLC*A 220
Score = 46.9 bits (96), Expect(5) = 1e-039
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -2
Query: 308 AQQSGRGAPFHSLRHSSSGSMVL 240
AQQSG G+PFHSLRHSSSGS L
Sbjct: 219 AQQSGSGSPFHSLRHSSSGSTCL 151
Score = 46.4 bits (95), Expect(5) = 3e-037
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = +2 / +3
Query: 248 STRCSSASRSGTARPCRSAELS*AAR 325
STRCSSASRSGTA CRSAEL A R
Sbjct: 159 STRCSSASRSGTASHCRSAELRLAVR 236
Score = 45.5 bits (93), Expect(6) = 2e-053
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3 / -1
Query: 327 VRAAQLSSAERQGRAVPLLEALEQRVD 247
+R A+ SSAERQ AVPLLEALEQRVD
Sbjct: 238 LRTARRSSAERQWLAVPLLEALEQRVD 158
Score = 45.1 bits (92), Expect(3) = 3e-023
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +3 / +1
Query: 249 RPAARVPQGVERRAPAALLSSA 314
RPAARVPQGVERRA AALLS A
Sbjct: 160 RPAARVPQGVERRATAALLSCA 225
Score = 40.0 bits (81), Expect(5) = 3e-037
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / +3
Query: 92 WSPTGSGSAGPTRCTG 139
W PTGS SAGPTRCTG
Sbjct: 6 WCPTGSRSAGPTRCTG 53
Score = 33.6 bits (67), Expect(5) = 3e-037
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / +1
Query: 150 GGRHRVPDRREDQV 191
GGRH VPDRRED+V
Sbjct: 64 GGRHPVPDRREDEV 105
Score = 26.7 bits (52), Expect(6) = 2e-053
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / -1
Query: 226 GHEHLVELLAG 194
GH+HLV+LLAG
Sbjct: 139 GHQHLVQLLAG 107
Score = 26.7 bits (52), Expect(6) = 2e-053
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / -1
Query: 375 CLEPLYFCFFLLC 337
CLEPLYF F +C
Sbjct: 298 CLEPLYFGFSSIC 260
Score = 25.8 bits (50), Expect(5) = 2e-050
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 195 PARSSTRCSWP 227
PARS TRC WP
Sbjct: 108 PARS*TRCWWP 140
Score = 22.6 bits (43), Expect(6) = 2e-053
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2 / -2
Query: 259 AAGRWCLRWLM 227
++G CLRWLM
Sbjct: 171 SSGSTCLRWLM 139
Score = 22.6 bits (43), Expect(5) = 2e-050
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 338 QRRKKQKYSGSRQ 376
Q +K KYSGSRQ
Sbjct: 261 QIEEKPKYSGSRQ 299
Score = 22.1 bits (42), Expect(5) = 1e-039
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -3
Query: 224 PRAPC*APRR 195
P APC APRR
Sbjct: 137 PPAPCSAPRR 108
Score = 21.7 bits (41), Expect(5) = 1e-039
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2 / -1
Query: 391 NDLETLS*AAILLFFPSLC 335
NDLETL + F S+C
Sbjct: 316 NDLETLCLEPLYFGFSSIC 260
Score = 21.7 bits (41), Expect(3) = 3e-023
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +2
Query: 200 EELNKVLVA 226
EELNKVLVA
Sbjct: 113 EELNKVLVA 139
Score = 21.7 bits (41), Expect(5) = 3e-037
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 196 RRGAQQGARG 225
RRGA+QGA G
Sbjct: 109 RRGAEQGAGG 138
>gb|BG356009.2|BG356009 EM1_19_C06.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 95.5 bits (202), Expect(5) = 8e-043
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VESG PLVPNRI+ECRSYPLYRFVREEVGT+YLTGE+TRSP
Sbjct: 81 VESGNPLVPNRIKECRSYPLYRFVREEVGTQYLTGEKTRSP 203
Score = 93.2 bits (197), Expect(8) = 2e-051
Identities = 41/54 (75%), Positives = 41/54 (75%)
Frame = -1 / -3
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GDLV SPVRY VPTSSRTNRYSG*DRHSLILLGTRG PLST AR A
Sbjct: 202 GDLVFSPVRYWVPTSSRTNRYSG*DRHSLILLGTRGLPLSTAARAASTSLGSAA 41
Score = 74.8 bits (157), Expect(6) = 1e-034
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = -3 / -2
Query: 177 AGQVLGADLLAHEPVQRVGPALPDPVGDQGXAALHG 70
AGQVLGADLLAHEPVQRVGPAL DPVG Q AALHG
Sbjct: 185 AGQVLGADLLAHEPVQRVGPALLDPVGHQRVAALHG 78
Score = 53.3 bits (110), Expect(5) = 8e-043
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
+DPLLECLKEWNG PLPLC*A
Sbjct: 252 VDPLLECLKEWNGEPLPLC*A 314
Score = 52.8 bits (109), Expect(6) = 2e-031
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +2 / +1
Query: 71 PWRAAXPWSPTGSGSAGPTRCTG 139
PWRAA W PTGS SAGPTRCTG
Sbjct: 79 PWRAATLWCPTGSRSAGPTRCTG 147
Score = 50.6 bits (104), Expect(5) = 8e-043
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +2 / +3
Query: 299 SAELS*AARTCSAQRRKKQKYSGSRQRFKIVYLQPD*QKMLSISTVALYY**LK 460
SA+ +R ++ K Q+ R + + +LQPD*QK+LSI TVALYY**LK
Sbjct: 324 SAQEQRRSRYTDRRKTKVQRLKTERFKIIVKFLQPD*QKILSIFTVALYY**LK 485
Score = 49.6 bits (102), Expect(8) = 2e-051
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -3 / -3
Query: 459 FSY**YKATVDIESIFC*SGCK 394
FSY**YKATV+IESIFC*SGCK
Sbjct: 484 FSY**YKATVNIESIFC*SGCK 419
Score = 46.9 bits (96), Expect(6) = 1e-034
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -3
Query: 308 AQQSGRGAPFHSLRHSSSGSMVL 240
AQQSG G+PFHSLRHSSSGS L
Sbjct: 313 AQQSGSGSPFHSLRHSSSGSTCL 245
Score = 46.4 bits (95), Expect(6) = 2e-031
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = +2 / +1
Query: 248 STRCSSASRSGTARPCRSAELS*AAR 325
STRCSSASRSGTA CRSAEL A R
Sbjct: 253 STRCSSASRSGTASHCRSAELRLAVR 330
Score = 46.0 bits (94), Expect(6) = 2e-031
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1 / +2
Query: 391 LFTTRLAEDALYIYRRLVLLVAEV 462
+FTTRLAED LYIYR LVLLVA+V
Sbjct: 416 VFTTRLAEDTLYIYRCLVLLVAKV 487
Score = 45.5 bits (93), Expect(8) = 2e-051
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3 / -2
Query: 327 VRAAQLSSAERQGRAVPLLEALEQRVD 247
+R A+ SSAERQ AVPLLEALEQRVD
Sbjct: 332 LRTARRSSAERQWLAVPLLEALEQRVD 252
Score = 44.1 bits (90), Expect(6) = 1e-034
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -2 / -2
Query: 472 HMNLLQLLIIQGDGRYREHLLLVWL* 395
H + L LL++QG+G+YRE+LLLVWL*
Sbjct: 497 HSHEL*LLVVQGNGKYREYLLLVWL* 420
Score = 34.1 bits (68), Expect(8) = 2e-051
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2 / -3
Query: 49 LGXRARTCCSNSATL 5
LG ARTCCSNSATL
Sbjct: 55 LGSAARTCCSNSATL 11
Score = 33.6 bits (67), Expect(6) = 2e-031
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / +2
Query: 150 GGRHRVPDRREDQV 191
GGRH VPDRRED+V
Sbjct: 158 GGRHPVPDRREDEV 199
Score = 26.7 bits (52), Expect(8) = 2e-051
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / -2
Query: 226 GHEHLVELLAG 194
GH+HLV+LLAG
Sbjct: 233 GHQHLVQLLAG 201
Score = 26.7 bits (52), Expect(8) = 2e-051
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / -2
Query: 375 CLEPLYFCFFLLC 337
CLEPLYF F +C
Sbjct: 392 CLEPLYFGFSSIC 354
Score = 25.8 bits (50), Expect(5) = 8e-043
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 195 PARSSTRCSWP 227
PARS TRC WP
Sbjct: 202 PARS*TRCWWP 234
Score = 24.9 bits (48), Expect(6) = 1e-034
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / -2
Query: 35 ADLLLELGHLG 3
ADLLLEL HLG
Sbjct: 41 ADLLLELXHLG 9
Score = 22.6 bits (43), Expect(6) = 2e-031
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 338 QRRKKQKYSGSRQ 376
Q +K KYSGSRQ
Sbjct: 355 QIEEKPKYSGSRQ 393
Score = 22.6 bits (43), Expect(8) = 2e-051
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2 / -3
Query: 259 AAGRWCLRWLM 227
++G CLRWLM
Sbjct: 265 SSGSTCLRWLM 233
Score = 22.6 bits (43), Expect(5) = 8e-043
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / +3
Query: 6 KVAEFEQQV 32
KVAEFEQQV
Sbjct: 12 KVAEFEQQV 38
Score = 22.6 bits (43), Expect(8) = 2e-051
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / -3
Query: 487 EHDNIHMN 464
EH+NIHMN
Sbjct: 508 EHNNIHMN 485
Score = 22.1 bits (42), Expect(6) = 1e-034
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -1
Query: 224 PRAPC*APRR 195
P APC APRR
Sbjct: 231 PPAPCSAPRR 202
Score = 21.7 bits (41), Expect(6) = 2e-031
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +2
Query: 196 RRGAQQGARG 225
RRGA+QGA G
Sbjct: 203 RRGAEQGAGG 232
Score = 21.7 bits (41), Expect(6) = 1e-034
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2 / -2
Query: 391 NDLETLS*AAILLFFPSLC 335
NDLETL + F S+C
Sbjct: 410 NDLETLCLEPLYFGFSSIC 354
>gb|CL173775.1|CL173775 104_377_10891106_148_31792_242 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10891106, DNA
sequence
Length = 725
Score = 95.5 bits (202), Expect(5) = 1e-042
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +1 / -3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VESG PLVPNRI+ECRSYPLYRFVREEVGT+YLTGE+TRSP
Sbjct: 420 VESGNPLVPNRIKECRSYPLYRFVREEVGTQYLTGEKTRSP 298
Score = 93.2 bits (197), Expect(7) = 6e-048
Identities = 41/54 (75%), Positives = 41/54 (75%)
Frame = -1 / +2
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GDLV SPVRY VPTSSRTNRYSG*DRHSLILLGTRG PLST AR A
Sbjct: 299 GDLVFSPVRYWVPTSSRTNRYSG*DRHSLILLGTRGLPLSTAARAASTSLGSAA 460
Score = 74.8 bits (157), Expect(6) = 8e-035
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = -3 / +1
Query: 177 AGQVLGADLLAHEPVQRVGPALPDPVGDQGXAALHG 70
AGQVLGADLLAHEPVQRVGPAL DPVG Q AALHG
Sbjct: 316 AGQVLGADLLAHEPVQRVGPALLDPVGHQRVAALHG 423
Score = 53.3 bits (110), Expect(5) = 1e-042
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
+DPLLECLKEWNG PLPLC*A
Sbjct: 249 VDPLLECLKEWNGEPLPLC*A 187
Score = 52.8 bits (109), Expect(6) = 1e-030
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +2 / -1
Query: 71 PWRAAXPWSPTGSGSAGPTRCTG 139
PWRAA W PTGS SAGPTRCTG
Sbjct: 422 PWRAATLWCPTGSRSAGPTRCTG 354
Score = 50.6 bits (104), Expect(5) = 1e-042
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +2 / -3
Query: 299 SAELS*AARTCSAQRRKKQKYSGSRQRFKIVYLQPD*QKMLSISTVALYY**LK 460
SA+ +R ++ K Q+ R + + +LQPD*QK+LSI TVALYY**LK
Sbjct: 177 SAQEQRRSRYTDRRKTKVQRLKTERFKIIVKFLQPD*QKILSIFTVALYY**LK 16
Score = 49.6 bits (102), Expect(7) = 6e-048
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -3 / +2
Query: 459 FSY**YKATVDIESIFC*SGCK 394
FSY**YKATV+IESIFC*SGCK
Sbjct: 17 FSY**YKATVNIESIFC*SGCK 82
Score = 46.9 bits (96), Expect(6) = 8e-035
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / +2
Query: 308 AQQSGRGAPFHSLRHSSSGSMVL 240
AQQSG G+PFHSLRHSSSGS L
Sbjct: 188 AQQSGSGSPFHSLRHSSSGSTCL 256
Score = 46.4 bits (95), Expect(6) = 1e-030
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = +2 / -1
Query: 248 STRCSSASRSGTARPCRSAELS*AAR 325
STRCSSASRSGTA CRSAEL A R
Sbjct: 248 STRCSSASRSGTASHCRSAELRLAVR 171
Score = 46.0 bits (94), Expect(6) = 1e-030
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1 / -2
Query: 391 LFTTRLAEDALYIYRRLVLLVAEV 462
+FTTRLAED LYIYR LVLLVA+V
Sbjct: 85 VFTTRLAEDTLYIYRCLVLLVAKV 14
Score = 45.5 bits (93), Expect(7) = 6e-048
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3 / +1
Query: 327 VRAAQLSSAERQGRAVPLLEALEQRVD 247
+R A+ SSAERQ AVPLLEALEQRVD
Sbjct: 169 LRTARRSSAERQWLAVPLLEALEQRVD 249
Score = 44.1 bits (90), Expect(6) = 8e-035
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -2 / +1
Query: 472 HMNLLQLLIIQGDGRYREHLLLVWL* 395
H + L LL++QG+G+YRE+LLLVWL*
Sbjct: 4 HSHEL*LLVVQGNGKYREYLLLVWL* 81
Score = 34.1 bits (68), Expect(7) = 6e-048
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2 / +2
Query: 49 LGXRARTCCSNSATL 5
LG ARTCCSNSATL
Sbjct: 446 LGSAARTCCSNSATL 490
Score = 33.6 bits (67), Expect(6) = 1e-030
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / -2
Query: 150 GGRHRVPDRREDQV 191
GGRH VPDRRED+V
Sbjct: 343 GGRHPVPDRREDEV 302
Score = 28.1 bits (55), Expect(6) = 8e-035
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / +1
Query: 35 ADLLLELGHLG 3
ADLLLELGHLG
Sbjct: 460 ADLLLELGHLG 492
Score = 26.7 bits (52), Expect(7) = 6e-048
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / +1
Query: 226 GHEHLVELLAG 194
GH+HLV+LLAG
Sbjct: 268 GHQHLVQLLAG 300
Score = 26.7 bits (52), Expect(7) = 6e-048
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / +1
Query: 375 CLEPLYFCFFLLC 337
CLEPLYF F +C
Sbjct: 109 CLEPLYFGFSSIC 147
Score = 25.8 bits (50), Expect(5) = 1e-042
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / -1
Query: 195 PARSSTRCSWP 227
PARS TRC WP
Sbjct: 299 PARS*TRCWWP 267
Score = 22.6 bits (43), Expect(6) = 1e-030
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / -1
Query: 338 QRRKKQKYSGSRQ 376
Q +K KYSGSRQ
Sbjct: 146 QIEEKPKYSGSRQ 108
Score = 22.6 bits (43), Expect(7) = 6e-048
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2 / +2
Query: 259 AAGRWCLRWLM 227
++G CLRWLM
Sbjct: 236 SSGSTCLRWLM 268
Score = 22.6 bits (43), Expect(5) = 1e-042
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -3
Query: 6 KVAEFEQQV 32
KVAEFEQQV
Sbjct: 489 KVAEFEQQV 463
Score = 22.1 bits (42), Expect(6) = 8e-035
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / +3
Query: 224 PRAPC*APRR 195
P APC APRR
Sbjct: 270 PPAPCSAPRR 299
Score = 21.7 bits (41), Expect(6) = 1e-030
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 196 RRGAQQGARG 225
RRGA+QGA G
Sbjct: 298 RRGAEQGAGG 269
Score = 21.7 bits (41), Expect(6) = 8e-035
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2 / +1
Query: 391 NDLETLS*AAILLFFPSLC 335
NDLETL + F S+C
Sbjct: 91 NDLETLCLEPLYFGFSSIC 147
>gb|BF587927.1|BF587927 FM1_34_F02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 462
Score = 87.2 bits (184), Expect(4) = 6e-045
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = +1 / +1
Query: 88 PLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
PLVPNRI+ECRSYPLYRFVREEVGT+YLTGE+TRSP
Sbjct: 1 PLVPNRIKECRSYPLYRFVREEVGTQYLTGEKTRSP 108
Score = 75.8 bits (159), Expect(6) = 2e-045
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = -1 / -2
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTR 90
GDLV SPVRY VPTSSRTNRYSG*DRHSLILLGT+
Sbjct: 107 GDLVFSPVRYWVPTSSRTNRYSG*DRHSLILLGTK 3
Score = 73.5 bits (154), Expect(6) = 2e-045
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = -3 / -2
Query: 531 SQERARRTPWRRSCGNXXXXXXTYFSY**YKATVDIESIFC*SGCK 394
SQE A PWRRSCG FSY**YKATV+IESIFC*SGCK
Sbjct: 461 SQEHAHCRPWRRSCGEEHNNIHMNFSY**YKATVNIESIFC*SGCK 324
Score = 71.6 bits (150), Expect(4) = 6e-045
Identities = 37/78 (47%), Positives = 48/78 (61%)
Frame = +2 / +1
Query: 299 SAELS*AARTCSAQRRKKQKYSGSRQRFKIVYLQPD*QKMLSISTVALYY**LKXXXXXX 478
SA+ +R ++ K Q+ R + + +LQPD*QK+LSI TVALYY**LK
Sbjct: 229 SAQEQRRSRYTDRRKTKVQRLKTERFKIIVKFLQPD*QKILSIFTVALYY**LKFM*MLL 408
Query: 479 XXFPQLRRHGVRRARSWL 532
PQLRRHG++ A SWL
Sbjct: 409 CSSPQLRRHGLQCACSWL 462
Score = 65.7 bits (137), Expect(6) = 3e-034
Identities = 31/47 (65%), Positives = 33/47 (70%)
Frame = +1 / +3
Query: 391 LFTTRLAEDALYIYRRLVLLVAEVSSCECCRVPAAATPWRATCAFLA 531
+FTTRLAED LYIYR LVLLVA+V AAATPW A C FLA
Sbjct: 321 VFTTRLAEDTLYIYRCLVLLVAKVHVNVVVFFTAAATPWPAMCMFLA 461
Score = 64.8 bits (135), Expect(5) = 1e-035
Identities = 29/46 (63%), Positives = 35/46 (76%)
Frame = -2 / -1
Query: 532 QPRTRTSHAMASQLREHDNIHMNLLQLLIIQGDGRYREHLLLVWL* 395
QPRT T AMASQLR H + L LL++QG+G+YRE+LLLVWL*
Sbjct: 462 QPRTCTLQAMASQLR*RTQQHSHEL*LLVVQGNGKYREYLLLVWL* 325
Score = 64.3 bits (134), Expect(5) = 1e-035
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = -3 / -1
Query: 177 AGQVLGADLLAHEPVQRVGPALPDPVGDQ 91
AGQVLGADLLAHEPVQRVGPAL DPVG Q
Sbjct: 90 AGQVLGADLLAHEPVQRVGPALLDPVGHQ 4
Score = 53.8 bits (111), Expect(4) = 6e-045
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEWNG PLPLC*A
Sbjct: 157 IDPLLECLKEWNGEPLPLC*A 219
Score = 49.6 bits (102), Expect(5) = 1e-035
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -1 / -2
Query: 308 AQQSGRGAPFHSLRHSSSGSMVL 240
AQQSG G+PFHSLRHSSSGSM L
Sbjct: 218 AQQSGSGSPFHSLRHSSSGSMCL 150
Score = 48.7 bits (100), Expect(6) = 3e-034
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +3 / +3
Query: 246 HRPAARVPQGVERRAPAALLSSA 314
HRPAARVPQGVERRA AALLS A
Sbjct: 156 HRPAARVPQGVERRATAALLSCA 224
Score = 45.5 bits (93), Expect(6) = 2e-045
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3 / -1
Query: 327 VRAAQLSSAERQGRAVPLLEALEQRVD 247
+R A+ SSAERQ AVPLLEALEQRVD
Sbjct: 237 LRTARRSSAERQWLAVPLLEALEQRVD 157
Score = 40.0 bits (81), Expect(6) = 3e-034
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / +2
Query: 92 WSPTGSGSAGPTRCTG 139
W PTGS SAGPTRCTG
Sbjct: 5 WCPTGSRSAGPTRCTG 52
Score = 33.6 bits (67), Expect(6) = 3e-034
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / +3
Query: 150 GGRHRVPDRREDQV 191
GGRH VPDRRED+V
Sbjct: 63 GGRHPVPDRREDEV 104
Score = 26.7 bits (52), Expect(6) = 2e-045
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / -1
Query: 226 GHEHLVELLAG 194
GH+HLV+LLAG
Sbjct: 138 GHQHLVQLLAG 106
Score = 26.7 bits (52), Expect(6) = 2e-045
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / -1
Query: 375 CLEPLYFCFFLLC 337
CLEPLYF F +C
Sbjct: 297 CLEPLYFGFSSIC 259
Score = 25.8 bits (50), Expect(4) = 6e-045
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 195 PARSSTRCSWP 227
PARS TRC WP
Sbjct: 107 PARS*TRCWWP 139
Score = 23.1 bits (44), Expect(6) = 2e-045
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2 / -2
Query: 259 AAGRWCLRWLM 227
++G CLRWLM
Sbjct: 170 SSGSMCLRWLM 138
Score = 22.6 bits (43), Expect(6) = 3e-034
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 338 QRRKKQKYSGSRQ 376
Q +K KYSGSRQ
Sbjct: 260 QIEEKPKYSGSRQ 298
Score = 22.1 bits (42), Expect(5) = 1e-035
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -3
Query: 224 PRAPC*APRR 195
P APC APRR
Sbjct: 136 PPAPCSAPRR 107
Score = 21.7 bits (41), Expect(5) = 1e-035
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2 / -1
Query: 391 NDLETLS*AAILLFFPSLC 335
NDLETL + F S+C
Sbjct: 315 NDLETLCLEPLYFGFSSIC 259
Score = 21.7 bits (41), Expect(6) = 3e-034
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 196 RRGAQQGARG 225
RRGA+QGA G
Sbjct: 108 RRGAEQGAGG 137
>gb|CL173774.1|CL173774 104_377_10891106_116_31793_242 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10891106, DNA
sequence
Length = 778
Score = 95.5 bits (202), Expect(6) = 3e-039
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VESG PLVPNRI+ECRSYPLYRFVREEVGT+YLTGE+TRSP
Sbjct: 396 VESGNPLVPNRIKECRSYPLYRFVREEVGTQYLTGEKTRSP 518
Score = 93.2 bits (197), Expect(7) = 1e-043
Identities = 41/54 (75%), Positives = 41/54 (75%)
Frame = -1 / -1
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GDLV SPVRY VPTSSRTNRYSG*DRHSLILLGTRG PLST AR A
Sbjct: 517 GDLVFSPVRYWVPTSSRTNRYSG*DRHSLILLGTRGLPLSTAARAASTSLGSAA 356
Score = 74.8 bits (157), Expect(6) = 5e-029
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = -3 / -3
Query: 177 AGQVLGADLLAHEPVQRVGPALPDPVGDQGXAALHG 70
AGQVLGADLLAHEPVQRVGPAL DPVG Q AALHG
Sbjct: 500 AGQVLGADLLAHEPVQRVGPALLDPVGHQRVAALHG 393
Score = 53.3 bits (110), Expect(6) = 3e-039
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
+DPLLECLKEWNG PLPLC*A
Sbjct: 567 VDPLLECLKEWNGEPLPLC*A 629
Score = 52.8 bits (109), Expect(5) = 2e-025
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +2 / +1
Query: 71 PWRAAXPWSPTGSGSAGPTRCTG 139
PWRAA W PTGS SAGPTRCTG
Sbjct: 394 PWRAATLWCPTGSRSAGPTRCTG 462
Score = 46.9 bits (96), Expect(6) = 5e-029
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -1
Query: 308 AQQSGRGAPFHSLRHSSSGSMVL 240
AQQSG G+PFHSLRHSSSGS L
Sbjct: 628 AQQSGSGSPFHSLRHSSSGSTCL 560
Score = 46.4 bits (95), Expect(5) = 2e-025
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = +2 / +1
Query: 248 STRCSSASRSGTARPCRSAELS*AAR 325
STRCSSASRSGTA CRSAEL A R
Sbjct: 568 STRCSSASRSGTASHCRSAELRLAVR 645
Score = 45.5 bits (93), Expect(7) = 1e-043
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3 / -3
Query: 327 VRAAQLSSAERQGRAVPLLEALEQRVD 247
+R A+ SSAERQ AVPLLEALEQRVD
Sbjct: 647 LRTARRSSAERQWLAVPLLEALEQRVD 567
Score = 35.4 bits (71), Expect(5) = 2e-025
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2 / +3
Query: 299 SAELS*AARTCSAQRRKKQKYSGSRQRFKIVYLQPD*QKMLSISTV 436
SA+ +R ++ K Q+ R + + +LQPD*QK+LSI TV
Sbjct: 639 SAQEQRRSRYTDRRKTKVQRLKTERFKIIVKFLQPD*QKILSIFTV 776
Score = 35.4 bits (71), Expect(7) = 1e-043
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -3 / -1
Query: 438 ATVDIESIFC*SGCK 394
ATV+IESIFC*SGCK
Sbjct: 778 ATVNIESIFC*SGCK 734
Score = 34.1 bits (68), Expect(6) = 3e-039
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1 / +2
Query: 391 LFTTRLAEDALYIYR 435
+FTTRLAED LYIYR
Sbjct: 731 VFTTRLAEDTLYIYR 775
Score = 34.1 bits (68), Expect(7) = 1e-043
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2 / -1
Query: 49 LGXRARTCCSNSATL 5
LG ARTCCSNSATL
Sbjct: 370 LGSAARTCCSNSATL 326
Score = 33.6 bits (67), Expect(5) = 2e-025
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / +2
Query: 150 GGRHRVPDRREDQV 191
GGRH VPDRRED+V
Sbjct: 473 GGRHPVPDRREDEV 514
Score = 28.1 bits (55), Expect(6) = 5e-029
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -3
Query: 35 ADLLLELGHLG 3
ADLLLELGHLG
Sbjct: 356 ADLLLELGHLG 324
Score = 26.7 bits (52), Expect(7) = 1e-043
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / -3
Query: 226 GHEHLVELLAG 194
GH+HLV+LLAG
Sbjct: 548 GHQHLVQLLAG 516
Score = 26.7 bits (52), Expect(7) = 1e-043
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / -3
Query: 375 CLEPLYFCFFLLC 337
CLEPLYF F +C
Sbjct: 707 CLEPLYFGFSSIC 669
Score = 25.8 bits (50), Expect(6) = 3e-039
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 195 PARSSTRCSWP 227
PARS TRC WP
Sbjct: 517 PARS*TRCWWP 549
Score = 24.4 bits (47), Expect(6) = 5e-029
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -2 / -3
Query: 436 DGRYREHLLLVWL* 395
+G+YRE+LLLV L*
Sbjct: 776 NGKYREYLLLVGL* 735
Score = 22.6 bits (43), Expect(6) = 3e-039
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 338 QRRKKQKYSGSRQ 376
Q +K KYSGSRQ
Sbjct: 670 QIEEKPKYSGSRQ 708
Score = 22.6 bits (43), Expect(6) = 3e-039
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / +3
Query: 6 KVAEFEQQV 32
KVAEFEQQV
Sbjct: 327 KVAEFEQQV 353
Score = 22.6 bits (43), Expect(7) = 1e-043
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2 / -1
Query: 259 AAGRWCLRWLM 227
++G CLRWLM
Sbjct: 580 SSGSTCLRWLM 548
Score = 22.1 bits (42), Expect(6) = 5e-029
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -2
Query: 224 PRAPC*APRR 195
P APC APRR
Sbjct: 546 PPAPCSAPRR 517
Score = 21.7 bits (41), Expect(5) = 2e-025
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +2
Query: 196 RRGAQQGARG 225
RRGA+QGA G
Sbjct: 518 RRGAEQGAGG 547
Score = 21.7 bits (41), Expect(6) = 5e-029
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2 / -3
Query: 391 NDLETLS*AAILLFFPSLC 335
NDLETL + F S+C
Sbjct: 725 NDLETLCLEPLYFGFSSIC 669
>gb|CW380095.1|CW380095 fsbb001f059l10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f059l10, DNA
sequence
Length = 659
Score = 55.6 bits (115), Expect(6) = 6e-039
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +1 / -2
Query: 475 CCRVPAAATPWRATCAFLAVAAAETFDGF 561
CC +PAAATPW A FLAVAA ETFDGF
Sbjct: 307 CCVLPAAATPWPAMRMFLAVAATETFDGF 221
Score = 55.1 bits (114), Expect(8) = 9e-042
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -3 / +2
Query: 576 PAYRLKTIKSFSSCDSQERARRTPWRRSCG 487
P ++KTIKSFSSC+SQE A PWRRSCG
Sbjct: 206 PNLQVKTIKSFSSCNSQEHAHCRPWRRSCG 295
Score = 53.3 bits (110), Expect(6) = 6e-039
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
+DPLLECLKEWNG PLPLC*A
Sbjct: 554 VDPLLECLKEWNGEPLPLC*A 492
Score = 52.4 bits (108), Expect(6) = 3e-031
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +3 / -1
Query: 474 MLSCSRSCDAMACDVRVLGCRSC*NF*WF 560
+L SRSCDAMAC+ VLGC S *NF*WF
Sbjct: 308 LLCSSRSCDAMACNAHVLGCCSY*NF*WF 222
Score = 50.6 bits (104), Expect(6) = 6e-039
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +2 / -1
Query: 299 SAELS*AARTCSAQRRKKQKYSGSRQRFKIVYLQPD*QKMLSISTVALYY**LK 460
SA+ +R ++ K Q+ R + + +LQPD*QK+LSI TVALYY**LK
Sbjct: 482 SAQEQRRSRYTDRRKTKVQRLKTERFKIIVKFLQPD*QKILSIFTVALYY**LK 321
Score = 49.6 bits (102), Expect(8) = 9e-042
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -3 / +1
Query: 459 FSY**YKATVDIESIFC*SGCK 394
FSY**YKATV+IESIFC*SGCK
Sbjct: 322 FSY**YKATVNIESIFC*SGCK 387
Score = 49.2 bits (101), Expect(6) = 7e-029
Identities = 23/39 (58%), Positives = 25/39 (64%)
Frame = -2 / +1
Query: 592 IYFIPPSLQVKNHQKFQQLRQPRTRTSHAMASQLREHDN 476
I + P L NHQKFQ L+QPRT AMASQLRE N
Sbjct: 190 IIYFIPQLTS*NHQKFQ*LQQPRTCALQAMASQLREEHN 306
Score = 46.9 bits (96), Expect(8) = 9e-042
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / +1
Query: 308 AQQSGRGAPFHSLRHSSSGSMVL 240
AQQSG G+PFHSLRHSSSGS L
Sbjct: 493 AQQSGSGSPFHSLRHSSSGSTCL 561
Score = 46.4 bits (95), Expect(6) = 3e-031
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = +2 / -2
Query: 248 STRCSSASRSGTARPCRSAELS*AAR 325
STRCSSASRSGTA CRSAEL A R
Sbjct: 553 STRCSSASRSGTASHCRSAELRLAVR 476
Score = 46.0 bits (94), Expect(6) = 3e-031
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1 / -3
Query: 391 LFTTRLAEDALYIYRRLVLLVAEV 462
+FTTRLAED LYIYR LVLLVA+V
Sbjct: 390 VFTTRLAEDTLYIYRCLVLLVAKV 319
Score = 45.5 bits (93), Expect(6) = 7e-029
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3 / +3
Query: 327 VRAAQLSSAERQGRAVPLLEALEQRVD 247
+R A+ SSAERQ AVPLLEALEQRVD
Sbjct: 474 LRTARRSSAERQWLAVPLLEALEQRVD 554
Score = 45.1 bits (92), Expect(6) = 6e-039
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +1 / -1
Query: 139 FVREEVGTEYLTGERTRSP 195
FVREEVGT+YLTGE+TRSP
Sbjct: 659 FVREEVGTQYLTGEKTRSP 603
Score = 44.1 bits (90), Expect(6) = 7e-029
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -2 / +3
Query: 472 HMNLLQLLIIQGDGRYREHLLLVWL* 395
H + L LL++QG+G+YRE+LLLVWL*
Sbjct: 309 HSHEL*LLVVQGNGKYREYLLLVWL* 386
Score = 38.6 bits (78), Expect(8) = 9e-042
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1 / +1
Query: 194 GDLVLSPVRYSVPTSSRT 141
GDLV SPVRY VPTSSRT
Sbjct: 604 GDLVFSPVRYWVPTSSRT 657
Score = 33.6 bits (67), Expect(6) = 3e-031
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / -3
Query: 150 GGRHRVPDRREDQV 191
GGRH VPDRRED+V
Sbjct: 648 GGRHPVPDRREDEV 607
Score = 32.2 bits (64), Expect(6) = 7e-029
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3 / +3
Query: 177 AGQVLGADLLAHE 139
AGQVLGADLLAHE
Sbjct: 621 AGQVLGADLLAHE 659
Score = 26.7 bits (52), Expect(8) = 9e-042
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2 / +1
Query: 259 AAGRWCLRWLMGHEHLVELLAG 194
++G CLRWLM L+ AG
Sbjct: 541 SSGSTCLRWLMATSTLISSSAG 606
Score = 26.7 bits (52), Expect(8) = 9e-042
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / +3
Query: 375 CLEPLYFCFFLLC 337
CLEPLYF F +C
Sbjct: 414 CLEPLYFGFSSIC 452
Score = 25.4 bits (49), Expect(6) = 6e-039
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2 / -3
Query: 578 GDEVNYFVLQ 607
GD+VNYFVLQ
Sbjct: 207 GDKVNYFVLQ 178
Score = 24.0 bits (46), Expect(8) = 9e-042
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1 / +3
Query: 602 EQNNLLHPP 576
EQNNLL+PP
Sbjct: 183 EQNNLLYPP 209
Score = 23.5 bits (45), Expect(6) = 3e-031
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / -2
Query: 577 GG*SKLFCS 603
GG*SKLFCS
Sbjct: 208 GG*SKLFCS 182
Score = 23.5 bits (45), Expect(6) = 7e-029
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3 / +2
Query: 606 CRTK*FTSSP 577
CRTK*FT SP
Sbjct: 179 CRTK*FTLSP 208
Score = 22.6 bits (43), Expect(8) = 9e-042
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / +1
Query: 487 EHDNIHMN 464
EH+NIHMN
Sbjct: 298 EHNNIHMN 321
Score = 22.6 bits (43), Expect(6) = 3e-031
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / -2
Query: 338 QRRKKQKYSGSRQ 376
Q +K KYSGSRQ
Sbjct: 451 QIEEKPKYSGSRQ 413
Score = 21.7 bits (41), Expect(6) = 7e-029
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2 / +3
Query: 391 NDLETLS*AAILLFFPSLC 335
NDLETL + F S+C
Sbjct: 396 NDLETLCLEPLYFGFSSIC 452
Score = 21.7 bits (41), Expect(6) = 6e-039
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3 / -2
Query: 195 PARSSTRCSWP 227
P RS +RC WP
Sbjct: 604 PPRS*SRCWWP 572
>gb|BE362449.1|BE362449 DG1_86_G01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 432
Score = 95.5 bits (202), Expect(5) = 5e-035
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VESG PLVPNRI+ECRSYPLYRFVREEVGT+YLTGE+TRSP
Sbjct: 81 VESGNPLVPNRIKECRSYPLYRFVREEVGTQYLTGEKTRSP 203
Score = 93.2 bits (197), Expect(6) = 4e-039
Identities = 41/54 (75%), Positives = 41/54 (75%)
Frame = -1 / -3
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GDLV SPVRY VPTSSRTNRYSG*DRHSLILLGTRG PLST AR A
Sbjct: 202 GDLVFSPVRYWVPTSSRTNRYSG*DRHSLILLGTRGLPLSTAARAASTSLGSAA 41
Score = 74.8 bits (157), Expect(5) = 2e-027
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = -3 / -2
Query: 177 AGQVLGADLLAHEPVQRVGPALPDPVGDQGXAALHG 70
AGQVLGADLLAHEPVQRVGPAL DPVG Q AALHG
Sbjct: 185 AGQVLGADLLAHEPVQRVGPALLDPVGHQRVAALHG 78
Score = 53.3 bits (110), Expect(5) = 5e-035
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
+DPLLECLKEWNG PLPLC*A
Sbjct: 252 VDPLLECLKEWNGEPLPLC*A 314
Score = 46.9 bits (96), Expect(5) = 2e-027
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -3
Query: 308 AQQSGRGAPFHSLRHSSSGSMVL 240
AQQSG G+PFHSLRHSSSGS L
Sbjct: 313 AQQSGSGSPFHSLRHSSSGSTCL 245
Score = 45.5 bits (93), Expect(6) = 4e-039
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3 / -2
Query: 327 VRAAQLSSAERQGRAVPLLEALEQRVD 247
+R A+ SSAERQ AVPLLEALEQRVD
Sbjct: 332 LRTARRSSAERQWLAVPLLEALEQRVD 252
Score = 34.1 bits (68), Expect(6) = 4e-039
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2 / -3
Query: 49 LGXRARTCCSNSATL 5
LG ARTCCSNSATL
Sbjct: 55 LGSAARTCCSNSATL 11
Score = 28.1 bits (55), Expect(5) = 2e-027
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 35 ADLLLELGHLG 3
ADLLLELGHLG
Sbjct: 41 ADLLLELGHLG 9
Score = 26.7 bits (52), Expect(6) = 4e-039
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / -2
Query: 226 GHEHLVELLAG 194
GH+HLV+LLAG
Sbjct: 233 GHQHLVQLLAG 201
Score = 26.7 bits (52), Expect(6) = 4e-039
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / -2
Query: 375 CLEPLYFCFFLLC 337
CLEPLYF F +C
Sbjct: 392 CLEPLYFGFSSIC 354
Score = 25.8 bits (50), Expect(5) = 5e-035
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 195 PARSSTRCSWP 227
PARS TRC WP
Sbjct: 202 PARS*TRCWWP 234
Score = 22.6 bits (43), Expect(5) = 5e-035
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 338 QRRKKQKYSGSRQ 376
Q +K KYSGSRQ
Sbjct: 355 QIEEKPKYSGSRQ 393
Score = 22.6 bits (43), Expect(6) = 4e-039
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2 / -3
Query: 259 AAGRWCLRWLM 227
++G CLRWLM
Sbjct: 265 SSGSTCLRWLM 233
Score = 22.6 bits (43), Expect(5) = 5e-035
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / +3
Query: 6 KVAEFEQQV 32
KVAEFEQQV
Sbjct: 12 KVAEFEQQV 38
Score = 22.1 bits (42), Expect(5) = 2e-027
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -1
Query: 224 PRAPC*APRR 195
P APC APRR
Sbjct: 231 PPAPCSAPRR 202
Score = 21.7 bits (41), Expect(5) = 2e-027
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2 / -2
Query: 391 NDLETLS*AAILLFFPSLC 335
NDLETL + F S+C
Sbjct: 410 NDLETLCLEPLYFGFSSIC 354
>gb|CW315423.1|CW315423 104_806_11472351_148_35827_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472351, DNA
sequence
Length = 651
Score = 95.5 bits (202), Expect(5) = 2e-034
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +1 / -2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VESG PLVPNRI+ECRSYPLYRFVREEVGT+YLTGE+TRSP
Sbjct: 335 VESGNPLVPNRIKECRSYPLYRFVREEVGTQYLTGEKTRSP 213
Score = 93.2 bits (197), Expect(6) = 3e-038
Identities = 41/54 (75%), Positives = 41/54 (75%)
Frame = -1 / +1
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GDLV SPVRY VPTSSRTNRYSG*DRHSLILLGTRG PLST AR A
Sbjct: 214 GDLVFSPVRYWVPTSSRTNRYSG*DRHSLILLGTRGLPLSTAARAASTSLGSAA 375
Score = 74.8 bits (157), Expect(5) = 1e-026
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = -3 / +3
Query: 177 AGQVLGADLLAHEPVQRVGPALPDPVGDQGXAALHG 70
AGQVLGADLLAHEPVQRVGPAL DPVG Q AALHG
Sbjct: 231 AGQVLGADLLAHEPVQRVGPALLDPVGHQRVAALHG 338
Score = 53.3 bits (110), Expect(5) = 2e-034
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
+DPLLECLKEWNG PLPLC*A
Sbjct: 164 VDPLLECLKEWNGEPLPLC*A 102
Score = 46.9 bits (96), Expect(5) = 1e-026
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / +1
Query: 308 AQQSGRGAPFHSLRHSSSGSMVL 240
AQQSG G+PFHSLRHSSSGS L
Sbjct: 103 AQQSGSGSPFHSLRHSSSGSTCL 171
Score = 45.5 bits (93), Expect(6) = 3e-038
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3 / +3
Query: 327 VRAAQLSSAERQGRAVPLLEALEQRVD 247
+R A+ SSAERQ AVPLLEALEQRVD
Sbjct: 84 LRTARRSSAERQWLAVPLLEALEQRVD 164
Score = 34.1 bits (68), Expect(6) = 3e-038
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2 / +1
Query: 49 LGXRARTCCSNSATL 5
LG ARTCCSNSATL
Sbjct: 361 LGSAARTCCSNSATL 405
Score = 28.1 bits (55), Expect(5) = 1e-026
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / +3
Query: 35 ADLLLELGHLG 3
ADLLLELGHLG
Sbjct: 375 ADLLLELGHLG 407
Score = 26.7 bits (52), Expect(6) = 3e-038
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / +3
Query: 226 GHEHLVELLAG 194
GH+HLV+LLAG
Sbjct: 183 GHQHLVQLLAG 215
Score = 26.7 bits (52), Expect(6) = 3e-038
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / +3
Query: 375 CLEPLYFCFFLLC 337
CLEPLYF F +C
Sbjct: 24 CLEPLYFGFSSIC 62
Score = 25.8 bits (50), Expect(5) = 2e-034
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / -3
Query: 195 PARSSTRCSWP 227
PARS TRC WP
Sbjct: 214 PARS*TRCWWP 182
Score = 22.6 bits (43), Expect(5) = 2e-034
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / -3
Query: 338 QRRKKQKYSGSRQ 376
Q +K KYSGSRQ
Sbjct: 61 QIEEKPKYSGSRQ 23
Score = 22.6 bits (43), Expect(5) = 2e-034
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -2
Query: 6 KVAEFEQQV 32
KVAEFEQQV
Sbjct: 404 KVAEFEQQV 378
Score = 22.6 bits (43), Expect(6) = 3e-038
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2 / +1
Query: 259 AAGRWCLRWLM 227
++G CLRWLM
Sbjct: 151 SSGSTCLRWLM 183
Score = 22.1 bits (42), Expect(5) = 1e-026
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / +2
Query: 224 PRAPC*APRR 195
P APC APRR
Sbjct: 185 PPAPCSAPRR 214
Score = 21.7 bits (41), Expect(5) = 1e-026
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2 / +3
Query: 391 NDLETLS*AAILLFFPSLC 335
NDLETL + F S+C
Sbjct: 6 NDLETLCLEPLYFGFSSIC 62
>gb|BG241551.1|BG241551 RHIZ2_17_A01.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 388
Score = 86.3 bits (182), Expect(4) = 5e-038
Identities = 32/36 (88%), Positives = 36/36 (100%)
Frame = +1 / +1
Query: 88 PLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
P+VPNRI+ECRSYPLYRFVREEVGT+YLTGE+TRSP
Sbjct: 1 PMVPNRIKECRSYPLYRFVREEVGTQYLTGEKTRSP 108
Score = 72.5 bits (152), Expect(6) = 3e-037
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -1 / -3
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGT 93
GDLV SPVRY VPTSSRTNRYSG DRHSLILLGT
Sbjct: 107 GDLVFSPVRYWVPTSSRTNRYSGYDRHSLILLGT 6
Score = 58.8 bits (122), Expect(5) = 8e-028
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -3 / -2
Query: 177 AGQVLGADLLAHEPVQRVGPALPDPVG 97
AGQVLGADLLAHEPVQRV PAL DPVG
Sbjct: 90 AGQVLGADLLAHEPVQRVRPALLDPVG 10
Score = 53.8 bits (111), Expect(4) = 5e-038
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEWNG PLPLC*A
Sbjct: 157 IDPLLECLKEWNGEPLPLC*A 219
Score = 49.6 bits (102), Expect(5) = 8e-028
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -1 / -3
Query: 308 AQQSGRGAPFHSLRHSSSGSMVL 240
AQQSG G+PFHSLRHSSSGSM L
Sbjct: 218 AQQSGSGSPFHSLRHSSSGSMCL 150
Score = 48.7 bits (100), Expect(6) = 3e-027
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +3 / +3
Query: 246 HRPAARVPQGVERRAPAALLSSA 314
HRPAARVPQGVERRA AALLS A
Sbjct: 156 HRPAARVPQGVERRATAALLSCA 224
Score = 48.3 bits (99), Expect(4) = 5e-038
Identities = 25/53 (47%), Positives = 34/53 (64%)
Frame = +2 / +1
Query: 299 SAELS*AARTCSAQRRKKQKYSGSRQRFKIVYLQPD*QKMLSISTVALYY**L 457
SA+ +R ++ K Q+ R + + +LQPD*QK+LSI TVALYY**L
Sbjct: 229 SAQEQRRSRYTDRRKTKVQRLKTERFKIIVKFLQPD*QKILSIFTVALYY**L 387
Score = 46.9 bits (96), Expect(6) = 3e-037
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -3 / -3
Query: 456 SY**YKATVDIESIFC*SGCK 394
SY**YKATV+IESIFC*SGCK
Sbjct: 386 SY**YKATVNIESIFC*SGCK 324
Score = 45.5 bits (93), Expect(6) = 3e-037
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3 / -2
Query: 327 VRAAQLSSAERQGRAVPLLEALEQRVD 247
+R A+ SSAERQ AVPLLEALEQRVD
Sbjct: 237 LRTARRSSAERQWLAVPLLEALEQRVD 157
Score = 43.7 bits (89), Expect(6) = 3e-027
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1 / +3
Query: 391 LFTTRLAEDALYIYRRLVLLVA 456
+FTTRLAED LYIYR LVLLVA
Sbjct: 321 VFTTRLAEDTLYIYRCLVLLVA 386
Score = 41.8 bits (85), Expect(5) = 8e-028
Identities = 15/20 (75%), Positives = 20/20 (100%)
Frame = -2 / -2
Query: 454 LLIIQGDGRYREHLLLVWL* 395
LL++QG+G+YRE+LLLVWL*
Sbjct: 384 LLVVQGNGKYREYLLLVWL* 325
Score = 35.9 bits (72), Expect(6) = 3e-027
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2 / +2
Query: 92 WSPTGSGSAGPTRCTG 139
W PTGS SAG TRCTG
Sbjct: 5 WCPTGSRSAGRTRCTG 52
Score = 33.6 bits (67), Expect(6) = 3e-027
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / +3
Query: 150 GGRHRVPDRREDQV 191
GGRH VPDRRED+V
Sbjct: 63 GGRHPVPDRREDEV 104
Score = 26.7 bits (52), Expect(6) = 3e-037
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / -2
Query: 226 GHEHLVELLAG 194
GH+HLV+LLAG
Sbjct: 138 GHQHLVQLLAG 106
Score = 26.7 bits (52), Expect(6) = 3e-037
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / -2
Query: 375 CLEPLYFCFFLLC 337
CLEPLYF F +C
Sbjct: 297 CLEPLYFGFSSIC 259
Score = 25.8 bits (50), Expect(4) = 5e-038
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 195 PARSSTRCSWP 227
PARS TRC WP
Sbjct: 107 PARS*TRCWWP 139
Score = 23.1 bits (44), Expect(6) = 3e-037
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2 / -3
Query: 259 AAGRWCLRWLM 227
++G CLRWLM
Sbjct: 170 SSGSMCLRWLM 138
Score = 22.6 bits (43), Expect(6) = 3e-027
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 338 QRRKKQKYSGSRQ 376
Q +K KYSGSRQ
Sbjct: 260 QIEEKPKYSGSRQ 298
Score = 22.1 bits (42), Expect(5) = 8e-028
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -1
Query: 224 PRAPC*APRR 195
P APC APRR
Sbjct: 136 PPAPCSAPRR 107
Score = 21.7 bits (41), Expect(6) = 3e-027
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 196 RRGAQQGARG 225
RRGA+QGA G
Sbjct: 108 RRGAEQGAGG 137
Score = 21.7 bits (41), Expect(5) = 8e-028
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2 / -2
Query: 391 NDLETLS*AAILLFFPSLC 335
NDLETL + F S+C
Sbjct: 315 NDLETLCLEPLYFGFSSIC 259
>gb|BG101760.1|BG101760 RHIZ2_21_A04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 525
Score = 95.5 bits (202), Expect(4) = 5e-033
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VESG PLVPNRI+ECRSYPLYRFVREEVGT+YLTGE+TRSP
Sbjct: 225 VESGNPLVPNRIKECRSYPLYRFVREEVGTQYLTGEKTRSP 347
Score = 93.2 bits (197), Expect(5) = 2e-035
Identities = 41/54 (75%), Positives = 41/54 (75%)
Frame = -1 / -3
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GDLV SPVRY VPTSSRTNRYSG*DRHSLILLGTRG PLST AR A
Sbjct: 346 GDLVFSPVRYWVPTSSRTNRYSG*DRHSLILLGTRGLPLSTAARAASTSLGSAA 185
Score = 74.8 bits (157), Expect(4) = 2e-026
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = -3 / -2
Query: 177 AGQVLGADLLAHEPVQRVGPALPDPVGDQGXAALHG 70
AGQVLGADLLAHEPVQRVGPAL DPVG Q AALHG
Sbjct: 329 AGQVLGADLLAHEPVQRVGPALLDPVGHQRVAALHG 222
Score = 53.8 bits (111), Expect(4) = 5e-033
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEWNG PLPLC*A
Sbjct: 396 IDPLLECLKEWNGEPLPLC*A 458
Score = 52.8 bits (109), Expect(4) = 6e-021
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +2 / +1
Query: 71 PWRAAXPWSPTGSGSAGPTRCTG 139
PWRAA W PTGS SAGPTRCTG
Sbjct: 223 PWRAATLWCPTGSRSAGPTRCTG 291
Score = 49.6 bits (102), Expect(4) = 2e-026
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -1 / -3
Query: 308 AQQSGRGAPFHSLRHSSSGSMVL 240
AQQSG G+PFHSLRHSSSGSM L
Sbjct: 457 AQQSGSGSPFHSLRHSSSGSMCL 389
Score = 48.7 bits (100), Expect(4) = 6e-021
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +3 / +2
Query: 246 HRPAARVPQGVERRAPAALLSSA 314
HRPAARVPQGVERRA AALLS A
Sbjct: 395 HRPAARVPQGVERRATAALLSCA 463
Score = 45.5 bits (93), Expect(5) = 2e-035
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3 / -2
Query: 327 VRAAQLSSAERQGRAVPLLEALEQRVD 247
+R A+ SSAERQ AVPLLEALEQRVD
Sbjct: 476 LRTARRSSAERQWLAVPLLEALEQRVD 396
Score = 34.1 bits (68), Expect(5) = 2e-035
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2 / -3
Query: 49 LGXRARTCCSNSATL 5
LG ARTCCSNSATL
Sbjct: 199 LGSAARTCCSNSATL 155
Score = 33.6 bits (67), Expect(4) = 6e-021
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / +2
Query: 150 GGRHRVPDRREDQV 191
GGRH VPDRRED+V
Sbjct: 302 GGRHPVPDRREDEV 343
Score = 28.1 bits (55), Expect(4) = 2e-026
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 35 ADLLLELGHLG 3
ADLLLELGHLG
Sbjct: 185 ADLLLELGHLG 153
Score = 26.7 bits (52), Expect(5) = 2e-035
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / -2
Query: 226 GHEHLVELLAG 194
GH+HLV+LLAG
Sbjct: 377 GHQHLVQLLAG 345
Score = 25.8 bits (50), Expect(4) = 5e-033
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 195 PARSSTRCSWP 227
PARS TRC WP
Sbjct: 346 PARS*TRCWWP 378
Score = 23.1 bits (44), Expect(5) = 2e-035
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2 / -3
Query: 259 AAGRWCLRWLM 227
++G CLRWLM
Sbjct: 409 SSGSMCLRWLM 377
Score = 22.6 bits (43), Expect(4) = 5e-033
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / +3
Query: 6 KVAEFEQQV 32
KVAEFEQQV
Sbjct: 156 KVAEFEQQV 182
Score = 22.1 bits (42), Expect(4) = 2e-026
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -1
Query: 224 PRAPC*APRR 195
P APC APRR
Sbjct: 375 PPAPCSAPRR 346
Score = 21.7 bits (41), Expect(4) = 6e-021
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +2
Query: 196 RRGAQQGARG 225
RRGA+QGA G
Sbjct: 347 RRGAEQGAGG 376
>gb|DN551872.1|DN551872 pSPR-RT-MR-H1_G04_C276 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 1191
Score = 81.3 bits (171), Expect(3) = 2e-027
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / -3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G +PNRI ECRSYPLYRFVR+EVG YLTGE+TRSP
Sbjct: 460 VENGTAAIPNRITECRSYPLYRFVRQEVGAVYLTGEKTRSP 338
Score = 53.3 bits (110), Expect(3) = 2e-027
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
IDPLLECLKEWNG PLP+C* Q
Sbjct: 289 IDPLLECLKEWNGEPLPIC*TQ 224
Score = 26.7 bits (52), Expect(3) = 2e-027
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 195 PARSSTRCSWP 227
PARSSTRCS P
Sbjct: 339 PARSSTRCSLP 307
>gb|BG487962.1|BG487962 RHIZ2_61_D12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 693
Score = 81.3 bits (171), Expect(3) = 2e-027
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G +PNRI ECRSYPLYRFVR+EVG YLTGE+TRSP
Sbjct: 216 VENGTAAIPNRITECRSYPLYRFVRQEVGAVYLTGEKTRSP 338
Score = 53.3 bits (110), Expect(3) = 2e-027
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
IDPLLECLKEWNG PLP+C* Q
Sbjct: 387 IDPLLECLKEWNGEPLPIC*TQ 452
Score = 26.7 bits (52), Expect(3) = 2e-027
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +1
Query: 195 PARSSTRCSWP 227
PARSSTRCS P
Sbjct: 337 PARSSTRCSLP 369
>gb|BG558058.1|BG558058 RHIZ2_66_B02.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 426
Score = 81.3 bits (171), Expect(3) = 2e-027
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G +PNRI ECRSYPLYRFVR+EVG YLTGE+TRSP
Sbjct: 39 VENGTAAIPNRITECRSYPLYRFVRQEVGAVYLTGEKTRSP 161
Score = 53.3 bits (110), Expect(3) = 2e-027
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
IDPLLECLKEWNG PLP+C* Q
Sbjct: 210 IDPLLECLKEWNGEPLPIC*TQ 275
Score = 26.7 bits (52), Expect(3) = 2e-027
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +1
Query: 195 PARSSTRCSWP 227
PARSSTRCS P
Sbjct: 160 PARSSTRCSLP 192
>gb|CL164480.1|CL164480 104_358_10807939_114_31814_307 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10807939, DNA
sequence
Length = 754
Score = 81.3 bits (171), Expect(3) = 5e-027
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / -3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G +PNRI ECRSYPLYRFVR+EVG YLTGE+TRSP
Sbjct: 383 VENGTAAIPNRITECRSYPLYRFVRQEVGAVYLTGEKTRSP 261
Score = 51.9 bits (107), Expect(3) = 5e-027
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
IDPLLECLKEWNG PLP+C* +
Sbjct: 212 IDPLLECLKEWNGEPLPIC*TE 147
Score = 26.7 bits (52), Expect(3) = 5e-027
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 195 PARSSTRCSWP 227
PARSSTRCS P
Sbjct: 262 PARSSTRCSLP 230
>gb|CW091315.1|CW091315 104_453_10998477_114_33030_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10998477, DNA
sequence
Length = 672
Score = 81.3 bits (171), Expect(3) = 5e-027
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / -2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G +PNRI ECRSYPLYRFVR+EVG YLTGE+TRSP
Sbjct: 383 VENGTAAIPNRITECRSYPLYRFVRQEVGAVYLTGEKTRSP 261
Score = 51.9 bits (107), Expect(3) = 5e-027
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
IDPLLECLKEWNG PLP+C* +
Sbjct: 212 IDPLLECLKEWNGEPLPIC*TE 147
Score = 26.7 bits (52), Expect(3) = 5e-027
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -3
Query: 195 PARSSTRCSWP 227
PARSSTRCS P
Sbjct: 262 PARSSTRCSLP 230
>gb|BE358396.1|BE358396 DG1_29_B04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 666
Score = 81.3 bits (171), Expect(3) = 5e-027
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G +PNRI ECRSYPLYRFVR+EVG YLTGE+TRSP
Sbjct: 400 VENGTAAIPNRITECRSYPLYRFVRQEVGAVYLTGEKTRSP 522
Score = 51.9 bits (107), Expect(3) = 5e-027
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
IDPLLECLKEWNG PLP+C* +
Sbjct: 571 IDPLLECLKEWNGEPLPIC*TE 636
Score = 26.7 bits (52), Expect(3) = 5e-027
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 195 PARSSTRCSWP 227
PARSSTRCS P
Sbjct: 521 PARSSTRCSLP 553
>gb|BE918444.1|BE918444 OV1_3_G09.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 629
Score = 81.3 bits (171), Expect(3) = 5e-027
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G +PNRI ECRSYPLYRFVR+EVG YLTGE+TRSP
Sbjct: 221 VENGTAAIPNRITECRSYPLYRFVRQEVGAVYLTGEKTRSP 343
Score = 51.9 bits (107), Expect(3) = 5e-027
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
IDPLLECLKEWNG PLP+C* +
Sbjct: 392 IDPLLECLKEWNGEPLPIC*TE 457
Score = 26.7 bits (52), Expect(3) = 5e-027
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +3
Query: 195 PARSSTRCSWP 227
PARSSTRCS P
Sbjct: 342 PARSSTRCSLP 374
>gb|BE358841.1|BE358841 DG1_32_D06.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 627
Score = 81.3 bits (171), Expect(3) = 5e-027
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G +PNRI ECRSYPLYRFVR+EVG YLTGE+TRSP
Sbjct: 214 VENGTAAIPNRITECRSYPLYRFVRQEVGAVYLTGEKTRSP 336
Score = 51.9 bits (107), Expect(3) = 5e-027
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
IDPLLECLKEWNG PLP+C* +
Sbjct: 385 IDPLLECLKEWNGEPLPIC*TE 450
Score = 26.7 bits (52), Expect(3) = 5e-027
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 195 PARSSTRCSWP 227
PARSSTRCS P
Sbjct: 335 PARSSTRCSLP 367
>gb|CW176959.1|CW176959 104_590_11158763_148_36591_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11158763, DNA
sequence
Length = 609
Score = 81.3 bits (171), Expect(3) = 5e-027
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / -1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G +PNRI ECRSYPLYRFVR+EVG YLTGE+TRSP
Sbjct: 453 VENGTAAIPNRITECRSYPLYRFVRQEVGAVYLTGEKTRSP 331
Score = 51.9 bits (107), Expect(3) = 5e-027
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
IDPLLECLKEWNG PLP+C* +
Sbjct: 282 IDPLLECLKEWNGEPLPIC*TE 217
Score = 26.7 bits (52), Expect(3) = 5e-027
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -2
Query: 195 PARSSTRCSWP 227
PARSSTRCS P
Sbjct: 332 PARSSTRCSLP 300
>gb|BE364574.2|BE364574 PI1_15_H09.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 575
Score = 81.3 bits (171), Expect(3) = 5e-027
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G +PNRI ECRSYPLYRFVR+EVG YLTGE+TRSP
Sbjct: 120 VENGTAAIPNRITECRSYPLYRFVRQEVGAVYLTGEKTRSP 242
Score = 51.9 bits (107), Expect(3) = 5e-027
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
IDPLLECLKEWNG PLP+C* +
Sbjct: 291 IDPLLECLKEWNGEPLPIC*TE 356
Score = 26.7 bits (52), Expect(3) = 5e-027
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +1
Query: 195 PARSSTRCSWP 227
PARSSTRCS P
Sbjct: 241 PARSSTRCSLP 273
>gb|BE360494.1|BE360494 DG1_63_B03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 517
Score = 81.3 bits (171), Expect(3) = 5e-027
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G +PNRI ECRSYPLYRFVR+EVG YLTGE+TRSP
Sbjct: 205 VENGTAAIPNRITECRSYPLYRFVRQEVGAVYLTGEKTRSP 327
Score = 51.9 bits (107), Expect(3) = 5e-027
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
IDPLLECLKEWNG PLP+C* +
Sbjct: 376 IDPLLECLKEWNGEPLPIC*TE 441
Score = 26.7 bits (52), Expect(3) = 5e-027
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 195 PARSSTRCSWP 227
PARSSTRCS P
Sbjct: 326 PARSSTRCSLP 358
>gb|CW460987.1|CW460987 fsbb001f208h04k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f208h04, DNA
sequence
Length = 763
Score = 87.2 bits (184), Expect(3) = 2e-026
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +1 / -3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G VPNRI ECRSYPLYRFVREE+GTEYLTGE+TRSP
Sbjct: 746 VENGTAAVPNRIAECRSYPLYRFVREELGTEYLTGEKTRSP 624
Score = 73.0 bits (153), Expect(3) = 2e-021
Identities = 31/41 (75%), Positives = 32/41 (78%)
Frame = -1 / +1
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLST 72
GDLV SPVRYSVP+SSRTN YSG DRHS IL GT P ST
Sbjct: 625 GDLVFSPVRYSVPSSSRTNLYSGYDRHSAILFGTAAVPFST 747
Score = 46.9 bits (96), Expect(3) = 2e-026
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID +LECLKEWNG PLP+C* +
Sbjct: 575 IDAVLECLKEWNGEPLPIC*TE 510
Score = 43.7 bits (89), Expect(3) = 2e-021
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1 / +1
Query: 305 QQSGRGAPFHSLRHSSSGSMVL 240
QQ GRG+PFHSLRHSS+ SM L
Sbjct: 517 QQIGRGSPFHSLRHSSTASMCL 582
Score = 24.4 bits (47), Expect(3) = 2e-021
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / +3
Query: 223 HEHLVELLAG 194
HEHLV LLAG
Sbjct: 597 HEHLVHLLAG 626
Score = 23.5 bits (45), Expect(3) = 2e-026
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3 / -1
Query: 195 PARSSTRCSW 224
PAR TRCSW
Sbjct: 625 PARR*TRCSW 596
>gb|CW460986.1|CW460986 fsbb001f208h04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f208h04, DNA
sequence
Length = 698
Score = 87.2 bits (184), Expect(3) = 2e-026
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G VPNRI ECRSYPLYRFVREE+GTEYLTGE+TRSP
Sbjct: 237 VENGTAAVPNRIAECRSYPLYRFVREELGTEYLTGEKTRSP 359
Score = 77.1 bits (162), Expect(4) = 3e-025
Identities = 33/44 (75%), Positives = 34/44 (77%)
Frame = -1 / -2
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXAR 63
GDLV SPVRYSVP+SSRTN YSG DRHS IL GT P ST AR
Sbjct: 358 GDLVFSPVRYSVPSSSRTNLYSGYDRHSAILFGTAAVPFSTAAR 227
Score = 46.9 bits (96), Expect(3) = 2e-026
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID +LECLKEWNG PLP+C* +
Sbjct: 408 IDAVLECLKEWNGEPLPIC*TE 473
Score = 43.7 bits (89), Expect(4) = 3e-025
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1 / -2
Query: 305 QQSGRGAPFHSLRHSSSGSMVL 240
QQ GRG+PFHSLRHSS+ SM L
Sbjct: 466 QQIGRGSPFHSLRHSSTASMCL 401
Score = 25.8 bits (50), Expect(4) = 3e-025
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1 / -1
Query: 38 RADLLLELGHLG 3
RA+LLLE GHLG
Sbjct: 200 RAELLLERGHLG 165
Score = 24.4 bits (47), Expect(4) = 3e-025
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / -1
Query: 223 HEHLVELLAG 194
HEHLV LLAG
Sbjct: 386 HEHLVHLLAG 357
Score = 23.5 bits (45), Expect(3) = 2e-026
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3 / +1
Query: 195 PARSSTRCSW 224
PAR TRCSW
Sbjct: 358 PARR*TRCSW 387
>gb|CW150733.1|CW150733 104_551_11143570_116_36314_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11143570, DNA
sequence
Length = 657
Score = 87.2 bits (184), Expect(3) = 2e-026
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G VPNRI ECRSYPLYRFVREE+GTEYLTGE+TRSP
Sbjct: 348 VENGTAAVPNRIAECRSYPLYRFVREELGTEYLTGEKTRSP 470
Score = 77.1 bits (162), Expect(4) = 3e-025
Identities = 33/44 (75%), Positives = 34/44 (77%)
Frame = -1 / -3
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXAR 63
GDLV SPVRYSVP+SSRTN YSG DRHS IL GT P ST AR
Sbjct: 469 GDLVFSPVRYSVPSSSRTNLYSGYDRHSAILFGTAAVPFSTAAR 338
Score = 46.9 bits (96), Expect(3) = 2e-026
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID +LECLKEWNG PLP+C* +
Sbjct: 519 IDAVLECLKEWNGEPLPIC*TE 584
Score = 43.7 bits (89), Expect(4) = 3e-025
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1 / -3
Query: 305 QQSGRGAPFHSLRHSSSGSMVL 240
QQ GRG+PFHSLRHSS+ SM L
Sbjct: 577 QQIGRGSPFHSLRHSSTASMCL 512
Score = 25.8 bits (50), Expect(4) = 3e-025
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1 / -2
Query: 38 RADLLLELGHLG 3
RA+LLLE GHLG
Sbjct: 311 RAELLLERGHLG 276
Score = 24.4 bits (47), Expect(4) = 3e-025
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / -2
Query: 223 HEHLVELLAG 194
HEHLV LLAG
Sbjct: 497 HEHLVHLLAG 468
Score = 23.5 bits (45), Expect(3) = 2e-026
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3 / +1
Query: 195 PARSSTRCSW 224
PAR TRCSW
Sbjct: 469 PARR*TRCSW 498
>gb|CW150734.1|CW150734 104_551_11143570_148_36313_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11143570, DNA
sequence
Length = 652
Score = 87.2 bits (184), Expect(3) = 2e-026
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +1 / -2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G VPNRI ECRSYPLYRFVREE+GTEYLTGE+TRSP
Sbjct: 621 VENGTAAVPNRIAECRSYPLYRFVREELGTEYLTGEKTRSP 499
Score = 76.7 bits (161), Expect(3) = 1e-022
Identities = 33/44 (75%), Positives = 34/44 (77%)
Frame = -1 / +2
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXAR 63
GDLV SPVRYSVP+SSRTN YSG DRHS IL GT P ST AR
Sbjct: 500 GDLVFSPVRYSVPSSSRTNLYSGYDRHSAILFGTAAVPFSTDAR 631
Score = 46.9 bits (96), Expect(3) = 2e-026
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID +LECLKEWNG PLP+C* +
Sbjct: 450 IDAVLECLKEWNGEPLPIC*TE 385
Score = 43.7 bits (89), Expect(3) = 1e-022
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1 / +2
Query: 305 QQSGRGAPFHSLRHSSSGSMVL 240
QQ GRG+PFHSLRHSS+ SM L
Sbjct: 392 QQIGRGSPFHSLRHSSTASMCL 457
Score = 24.4 bits (47), Expect(3) = 1e-022
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / +1
Query: 223 HEHLVELLAG 194
HEHLV LLAG
Sbjct: 472 HEHLVHLLAG 501
Score = 23.5 bits (45), Expect(3) = 2e-026
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3 / -3
Query: 195 PARSSTRCSW 224
PAR TRCSW
Sbjct: 500 PARR*TRCSW 471
>gb|BF481310.1|BF481310 FM1_18_D04.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 411
Score = 76.7 bits (161), Expect(3) = 4e-026
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +1 / +3
Query: 82 GXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
G +PNRI ECRSYPLYRFVR+EVG YLTGE+TRSP
Sbjct: 3 GTAAIPNRITECRSYPLYRFVRQEVGAVYLTGEKTRSP 116
Score = 53.3 bits (110), Expect(3) = 4e-026
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
IDPLLECLKEWNG PLP+C* Q
Sbjct: 165 IDPLLECLKEWNGEPLPIC*TQ 230
Score = 26.7 bits (52), Expect(3) = 4e-026
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +1
Query: 195 PARSSTRCSWP 227
PARSSTRCS P
Sbjct: 115 PARSSTRCSLP 147
>gb|AW922566.1|AW922566 DG1_45_G07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 309
Score = 53.3 bits (110), Expect(6) = 9e-025
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
+DPLLECLKEWNG PLPLC*A
Sbjct: 113 VDPLLECLKEWNGEPLPLC*A 175
Score = 50.6 bits (104), Expect(6) = 9e-025
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1 / +2
Query: 133 YRFVREEVGTEYLTGERTRSP 195
YRFVREEVGT+YLTGE+TRSP
Sbjct: 2 YRFVREEVGTQYLTGEKTRSP 64
Score = 46.9 bits (96), Expect(6) = 5e-025
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -1 / -1
Query: 194 GDLVLSPVRYSVPTSSRTNRY 132
GDLV SPVRY VPTSSRTNRY
Sbjct: 63 GDLVFSPVRYWVPTSSRTNRY 1
Score = 45.5 bits (93), Expect(6) = 5e-025
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3 / -3
Query: 327 VRAAQLSSAERQGRAVPLLEALEQRVD 247
+R A+ SSAERQ AVPLLEALEQRVD
Sbjct: 193 LRTARRSSAERQWLAVPLLEALEQRVD 113
Score = 27.2 bits (53), Expect(6) = 5e-025
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 423 ESIFC*SGCK 394
ESIFC*SGCK
Sbjct: 309 ESIFC*SGCK 280
Score = 26.7 bits (52), Expect(6) = 5e-025
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / -3
Query: 226 GHEHLVELLAG 194
GH+HLV+LLAG
Sbjct: 94 GHQHLVQLLAG 62
Score = 26.7 bits (52), Expect(6) = 5e-025
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / -3
Query: 375 CLEPLYFCFFLLC 337
CLEPLYF F +C
Sbjct: 253 CLEPLYFGFSSIC 215
Score = 25.8 bits (50), Expect(6) = 9e-025
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 195 PARSSTRCSWP 227
PARS TRC WP
Sbjct: 63 PARS*TRCWWP 95
Score = 23.5 bits (45), Expect(6) = 9e-025
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 391 LFTTRLAEDAL 423
+FTTRLAED L
Sbjct: 277 VFTTRLAEDTL 309
Score = 22.6 bits (43), Expect(6) = 9e-025
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 338 QRRKKQKYSGSRQ 376
Q +K KYSGSRQ
Sbjct: 216 QIEEKPKYSGSRQ 254
Score = 22.6 bits (43), Expect(6) = 5e-025
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2 / -1
Query: 259 AAGRWCLRWLM 227
++G CLRWLM
Sbjct: 126 SSGSTCLRWLM 94
Score = 18.9 bits (35), Expect(6) = 9e-025
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3 / +2
Query: 228 INQRKHHRP 254
INQRKH P
Sbjct: 95 INQRKHVDP 121
>gb|BE367374.1|BE367374 PI1_4_E12.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 326
Score = 49.6 bits (102), Expect(6) = 3e-023
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -3 / -3
Query: 459 FSY**YKATVDIESIFC*SGCK 394
FSY**YKATV+IESIFC*SGCK
Sbjct: 300 FSY**YKATVNIESIFC*SGCK 235
Score = 43.7 bits (89), Expect(6) = 3e-023
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -3 / -2
Query: 327 VRAAQLSSAERQGRAVPLLEALEQRVD 247
+R A+ SSA+RQ AVPLLEALEQRVD
Sbjct: 148 LRTARRSSAKRQWLAVPLLEALEQRVD 68
Score = 26.7 bits (52), Expect(6) = 3e-023
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / -2
Query: 226 GHEHLVELLAG 194
GH+HLV+LLAG
Sbjct: 49 GHQHLVQLLAG 17
Score = 24.4 bits (47), Expect(6) = 3e-023
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / -2
Query: 375 CLEPLYFCFFLLC 337
CLEPLYF F C
Sbjct: 208 CLEPLYFGFSSNC 170
Score = 22.6 bits (43), Expect(6) = 3e-023
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2 / -3
Query: 259 AAGRWCLRWLM 227
++G CLRWLM
Sbjct: 81 SSGSTCLRWLM 49
Score = 22.6 bits (43), Expect(6) = 3e-023
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / -3
Query: 487 EHDNIHMN 464
EH+NIHMN
Sbjct: 324 EHNNIHMN 301
>gb|CW439402.1|CW439402 fsbb001f157i10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f157i10, DNA
sequence
Length = 706
Score = 55.1 bits (114), Expect(5) = 2e-022
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -3 / -3
Query: 576 PAYRLKTIKSFSSCDSQERARRTPWRRSCG 487
P ++KTIKSFSSC+SQE A PWRRSCG
Sbjct: 284 PNLQVKTIKSFSSCNSQEHAHCRPWRRSCG 195
Score = 49.6 bits (102), Expect(5) = 2e-022
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -3 / -2
Query: 459 FSY**YKATVDIESIFC*SGCK 394
FSY**YKATV+IESIFC*SGCK
Sbjct: 168 FSY**YKATVNIESIFC*SGCK 103
Score = 26.7 bits (52), Expect(5) = 2e-022
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / -1
Query: 375 CLEPLYFCFFLLC 337
CLEPLYF F +C
Sbjct: 76 CLEPLYFGFSSIC 38
Score = 24.0 bits (46), Expect(5) = 2e-022
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 602 EQNNLLHPP 576
EQNNLL+PP
Sbjct: 307 EQNNLLYPP 281
Score = 22.6 bits (43), Expect(5) = 2e-022
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / -2
Query: 487 EHDNIHMN 464
EH+NIHMN
Sbjct: 192 EHNNIHMN 169
>gb|BE361256.1|BE361256 DG1_70_D10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 343
Score = 62.5 bits (130), Expect(3) = 2e-022
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = +1 / +1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
E+G + NRI++ RSYPLYRF+R+++G YLTGE+ +SP
Sbjct: 61 ETGTAPIGNRIKDSRSYPLYRFIRQDLGAVYLTGEKLKSP 180
Score = 49.6 bits (102), Expect(3) = 2e-022
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEW+G PLP+C*A
Sbjct: 229 IDPMLECLKEWDGKPLPIC*A 291
Score = 31.3 bits (62), Expect(3) = 2e-022
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +2
Query: 192 PPARSSTRCSW 224
PPARS+TRCSW
Sbjct: 176 PPARSATRCSW 208
>gb|BG047939.1|BG047939 OV1_25_F09.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 679
Score = 62.5 bits (130), Expect(3) = 3e-022
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = +1 / +3
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
E+G + NRI++ RSYPLYRF+R+++G YLTGE+ +SP
Sbjct: 135 ETGTAPIGNRIKDSRSYPLYRFIRQDLGAVYLTGEKLKSP 254
Score = 49.6 bits (102), Expect(3) = 3e-022
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEW+G PLP+C*A
Sbjct: 303 IDPMLECLKEWDGKPLPIC*A 365
Score = 31.3 bits (62), Expect(3) = 3e-022
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +1
Query: 192 PPARSSTRCSW 224
PPARS+TRCSW
Sbjct: 250 PPARSATRCSW 282
>gb|BG932956.1|BG932956 DG1_69_D11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 667
Score = 62.5 bits (130), Expect(3) = 3e-022
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = +1 / +2
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
E+G + NRI++ RSYPLYRF+R+++G YLTGE+ +SP
Sbjct: 113 ETGTAPIGNRIKDSRSYPLYRFIRQDLGAVYLTGEKLKSP 232
Score = 49.6 bits (102), Expect(3) = 3e-022
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEW+G PLP+C*A
Sbjct: 281 IDPMLECLKEWDGKPLPIC*A 343
Score = 31.3 bits (62), Expect(3) = 3e-022
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 192 PPARSSTRCSW 224
PPARS+TRCSW
Sbjct: 228 PPARSATRCSW 260
>gb|BG948233.1|BG948233 IP1_10_H11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 639
Score = 62.5 bits (130), Expect(3) = 3e-022
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = +1 / +2
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
E+G + NRI++ RSYPLYRF+R+++G YLTGE+ +SP
Sbjct: 74 ETGTAPIGNRIKDSRSYPLYRFIRQDLGAVYLTGEKLKSP 193
Score = 49.6 bits (102), Expect(3) = 3e-022
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEW+G PLP+C*A
Sbjct: 242 IDPMLECLKEWDGKPLPIC*A 304
Score = 31.3 bits (62), Expect(3) = 3e-022
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 192 PPARSSTRCSW 224
PPARS+TRCSW
Sbjct: 189 PPARSATRCSW 221
>gb|BE366341.1|BE366341 PI1_32_D08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 622
Score = 62.5 bits (130), Expect(3) = 3e-022
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = +1 / +1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
E+G + NRI++ RSYPLYRF+R+++G YLTGE+ +SP
Sbjct: 109 ETGTAPIGNRIKDSRSYPLYRFIRQDLGAVYLTGEKLKSP 228
Score = 49.6 bits (102), Expect(3) = 3e-022
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEW+G PLP+C*A
Sbjct: 277 IDPMLECLKEWDGKPLPIC*A 339
Score = 31.3 bits (62), Expect(3) = 3e-022
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +2
Query: 192 PPARSSTRCSW 224
PPARS+TRCSW
Sbjct: 224 PPARSATRCSW 256
>gb|BG102506.1|BG102506 RHIZ2_33_H09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 606
Score = 62.5 bits (130), Expect(3) = 3e-022
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = +1 / +2
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
E+G + NRI++ RSYPLYRF+R+++G YLTGE+ +SP
Sbjct: 245 ETGTAPIGNRIKDSRSYPLYRFIRQDLGAVYLTGEKLKSP 364
Score = 49.6 bits (102), Expect(3) = 3e-022
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEW+G PLP+C*A
Sbjct: 413 IDPMLECLKEWDGKPLPIC*A 475
Score = 31.3 bits (62), Expect(3) = 3e-022
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 192 PPARSSTRCSW 224
PPARS+TRCSW
Sbjct: 360 PPARSATRCSW 392
>gb|BG948544.1|BG948544 IP1_10_H11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 599
Score = 62.5 bits (130), Expect(3) = 3e-022
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = +1 / +3
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
E+G + NRI++ RSYPLYRF+R+++G YLTGE+ +SP
Sbjct: 297 ETGTAPIGNRIKDSRSYPLYRFIRQDLGAVYLTGEKLKSP 416
Score = 49.6 bits (102), Expect(3) = 3e-022
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEW+G PLP+C*A
Sbjct: 465 IDPMLECLKEWDGKPLPIC*A 527
Score = 31.3 bits (62), Expect(3) = 3e-022
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +1
Query: 192 PPARSSTRCSW 224
PPARS+TRCSW
Sbjct: 412 PPARSATRCSW 444
>gb|BG047581.1|BG047581 OV1_25_F09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 577
Score = 62.5 bits (130), Expect(3) = 3e-022
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = +1 / +2
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
E+G + NRI++ RSYPLYRF+R+++G YLTGE+ +SP
Sbjct: 341 ETGTAPIGNRIKDSRSYPLYRFIRQDLGAVYLTGEKLKSP 460
Score = 49.6 bits (102), Expect(3) = 3e-022
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEW+G PLP+C*A
Sbjct: 509 IDPMLECLKEWDGKPLPIC*A 571
Score = 31.3 bits (62), Expect(3) = 3e-022
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 192 PPARSSTRCSW 224
PPARS+TRCSW
Sbjct: 456 PPARSATRCSW 488
>gb|AW677701.1|AW677701 WS1_10_H08.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 571
Score = 62.5 bits (130), Expect(3) = 3e-022
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = +1 / -1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
E+G + NRI++ RSYPLYRF+R+++G YLTGE+ +SP
Sbjct: 256 ETGTAPIGNRIKDSRSYPLYRFIRQDLGAVYLTGEKLKSP 137
Score = 49.6 bits (102), Expect(3) = 3e-022
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEW+G PLP+C*A
Sbjct: 88 IDPMLECLKEWDGKPLPIC*A 26
Score = 31.3 bits (62), Expect(3) = 3e-022
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / -2
Query: 192 PPARSSTRCSW 224
PPARS+TRCSW
Sbjct: 141 PPARSATRCSW 109
>gb|BE359207.1|BE359207 DG1_39_C05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 393
Score = 62.5 bits (130), Expect(3) = 3e-022
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = +1 / +2
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
E+G + NRI++ RSYPLYRF+R+++G YLTGE+ +SP
Sbjct: 104 ETGTAPIGNRIKDSRSYPLYRFIRQDLGAVYLTGEKLKSP 223
Score = 49.6 bits (102), Expect(3) = 3e-022
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEW+G PLP+C*A
Sbjct: 272 IDPMLECLKEWDGKPLPIC*A 334
Score = 31.3 bits (62), Expect(3) = 3e-022
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 192 PPARSSTRCSW 224
PPARS+TRCSW
Sbjct: 219 PPARSATRCSW 251
>gb|BG355763.2|BG355763 EM1_19_C06.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 495
Score = 90.4 bits (191), Expect(2) = 9e-022
Identities = 40/53 (75%), Positives = 40/53 (75%)
Frame = -1 / -3
Query: 191 DLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
DLV SPVRY VPTSSRTNRYSG*DRHSLILLGTRG PLST AR A
Sbjct: 493 DLVFSPVRYWVPTSSRTNRYSG*DRHSLILLGTRGLPLSTAARAASTSLGSAA 335
Score = 34.1 bits (68), Expect(2) = 9e-022
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2 / -3
Query: 49 LGXRARTCCSNSATL 5
LG ARTCCSNSATL
Sbjct: 349 LGSAARTCCSNSATL 305
>gb|BG273178.1|BG273178 OV2_27_G08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 534
Score = 57.9 bits (120), Expect(3) = 7e-021
Identities = 20/34 (58%), Positives = 28/34 (82%)
Frame = +1 / +2
Query: 94 VPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+ NRI+ RSYPLYRF+R+++G YLTGE+ +SP
Sbjct: 11 IGNRIKHSRSYPLYRFIRQDLGAVYLTGEKLKSP 112
Score = 49.6 bits (102), Expect(3) = 7e-021
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEW+G PLP+C*A
Sbjct: 161 IDPMLECLKEWDGKPLPIC*A 223
Score = 31.3 bits (62), Expect(3) = 7e-021
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 192 PPARSSTRCSW 224
PPARS+TRCSW
Sbjct: 108 PPARSATRCSW 140
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 752,098,968
Number of Sequences: 832831
Number of extensions: 11747620
Number of successful extensions: 182462
Number of sequences better than 1.0e-020: 46
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 19023795567
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)