TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4CL
(1986 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN129079.1|CN129079 RHOH1_33_H09.b3_A002 Acid- and alkal... 491 e-137
gb|CN129749.1|CN129749 RHOH1_37_E03.b1_A002 Acid- and alkal... 316 e-114
gb|CW077966.1|CW077966 104_386_10894698_116_31912_378 Sorgh... 265 e-111
gb|CW273595.1|CW273595 104_746_11403983_148_35368_094 Sorgh... 385 e-106
gb|CN145355.1|CN145355 WOUND1_28_A03.g1_A002 Wounded leaves... 269 e-101
gb|CW128047.1|CW128047 104_509_11113781_148_34748_023 Sorgh... 365 1e-099
gb|CW071495.1|CW071495 104_323_10591543_114_30471 Sorghum m... 222 2e-098
gb|BE597274.1|BE597274 PI1_70_C05.g1_A002 Pathogen induced ... 293 1e-094
gb|CD229384.1|CD229384 CCC1_15_E01.b1_A007 Callus culture/c... 269 3e-094
gb|CW157694.1|CW157694 104_561_11147661_116_36391_093 Sorgh... 295 8e-094
gb|CW077967.1|CW077967 104_386_10894698_148_31911_378 Sorgh... 176 5e-092
gb|CN129170.1|CN129170 RHOH1_33_H09.g1_A002 Acid- and alkal... 288 3e-087
gb|CW128046.1|CW128046 104_509_11113781_116_34744_023 Sorgh... 177 1e-081
gb|CX613435.1|CX613435 GABR1_8_D10.b1_A002 GA- or brassinol... 305 2e-081
gb|CW157695.1|CW157695 104_561_11147661_148_36392_093 Sorgh... 248 4e-073
gb|CF430022.1|CF430022 PH1_25_E11.g1_A002 Phosphorous-defic... 172 2e-068
gb|CW380206.1|CW380206 fsbb001f059o07f0 Sorghum methylation... 143 3e-068
gb|BE597495.1|BE597495 PI1_70_C05.b1_A002 Pathogen induced ... 251 3e-065
gb|CD429206.1|CD429206 ETH1_3_C09.b1_A002 Ethylene-treated ... 158 4e-061
gb|BE359084.1|BE359084 DG1_38_H02.g1_A002 Dark Grown 1 (DG1... 235 2e-060
gb|CW194292.1|CW194292 104_617_11180020_148_36790_008 Sorgh... 138 5e-059
gb|CW078695.1|CW078695 104_396_10898313_114_31923_153 Sorgh... 180 2e-058
gb|U23787.1|SBU23787 Sorghum bicolor 4-hydroxycinnamic acid... 138 2e-057
gb|BZ629316.1|BZ629316 ih65e07.b1 WGS-SbicolorF (DH5a methy... 173 1e-056
gb|CX606247.1|CX606247 ANR1_2_A04.b1_A002 Anaerobic roots S... 161 4e-050
gb|BI211898.1|BI211898 IP1_62_G05.g1_A002 Immature pannicle... 197 6e-049
gb|CD232716.1|CD232716 SS1_1_H12.b1_A012 Salt-stressed seed... 194 4e-048
gb|CF429879.1|CF429879 PH1_25_E11.b1_A002 Phosphorous-defic... 194 4e-048
gb|CN127673.1|CN127673 RHOH1_24_H12.b1_A002 Acid- and alkal... 193 6e-048
gb|CN134916.1|CN134916 OX1_29_H04.b1_A002 Oxidatively-stres... 192 2e-047
gb|CW361238.1|CW361238 fsbb001f029k23k0 Sorghum methylation... 177 5e-046
gb|CW493569.1|CW493569 fsbb001f284g08f0 Sorghum methylation... 103 1e-045
gb|CL190993.1|CL190993 104_409_10906471_114_32488_022 Sorgh... 146 2e-045
gb|CW331181.1|CW331181 104_828_11480770_148_36025_041 Sorgh... 146 2e-045
gb|CW134050.1|CW134050 104_518_11117099_148_34816_046 Sorgh... 140 8e-045
gb|BE362940.2|BE362940 DG1_91_B11.g1_A002 Dark Grown 1 (DG1... 182 2e-044
gb|CW362994.1|CW362994 fsbb001f034f02k0 Sorghum methylation... 178 2e-043
gb|CD235658.1|CD235658 SS1_37_F06.b1_A012 Salt-stressed see... 177 5e-043
gb|CW344133.1|CW344133 104_846_11487796_116_36192_004 Sorgh... 176 1e-042
gb|CF760165.1|CF760165 DSAF1_56_C09.b1_A011 Drought-stresse... 176 1e-042
gb|CW345534.1|CW345534 104_848_11488543_148_36210_022 Sorgh... 145 7e-042
gb|CW073480.1|CW073480 104_335_10779929_114_31363_329 Sorgh... 137 4e-041
gb|CD429254.1|CD429254 ETH1_3_C09.g1_A002 Ethylene-treated ... 92 6e-039
gb|CX613521.1|CX613521 GABR1_8_D10.g1_A002 GA- or brassinol... 82 3e-038
gb|CW302339.1|CW302339 104_786_11464668_116_35663_040 Sorgh... 122 1e-037
gb|CW188088.1|CW188088 104_607_11172835_116_36721_068 Sorgh... 157 4e-037
gb|CW041863.1|CW041863 104_275_10506796_115_30285 Sorghum m... 155 2e-036
gb|CL185168.1|CL185168 104_399_10899340_114_32393_016 Sorgh... 86 2e-033
gb|CW351983.1|CW351983 fsbb001f014a08f0 Sorghum methylation... 114 6e-033
gb|CW217309.1|CW217309 104_650_11195588_116_37132_072 Sorgh... 144 6e-033
gb|CW034153.1|CW034153 104_264_10502381_115_30380 Sorghum m... 100 8e-033
gb|CW380207.1|CW380207 fsbb001f059o07k0 Sorghum methylation... 143 1e-032
gb|CW426309.1|CW426309 fsbb001f137k03k0 Sorghum methylation... 142 2e-032
gb|BG053729.1|BG053729 RHIZ2_9_A09.b1_A003 Rhizome2 (RHIZ2)... 140 6e-032
gb|CD232738.1|CD232738 SS1_1_H12.g1_A012 Salt-stressed seed... 82 1e-031
gb|CL190994.1|CL190994 104_409_10906471_116_32496_022 Sorgh... 137 5e-031
gb|CW186710.1|CW186710 104_604_11166709_148_36710_051 Sorgh... 134 5e-030
gb|CN129828.1|CN129828 RHOH1_37_E03.g1_A002 Acid- and alkal... 92 8e-030
gb|CW146571.1|CW146571 104_539_11139064_116_34991_056 Sorgh... 82 3e-029
gb|CW482182.1|CW482182 fsbb001f242c09k0 Sorghum methylation... 77 5e-029
gb|CL171779.1|CL171779 104_373_10889666_148_31776_338 Sorgh... 98 3e-028
gb|CW339593.1|CW339593 104_840_11485351_148_36139_026 Sorgh... 97 9e-028
gb|BI643612.1|BI643612 DG1_91_B11.b1_A002 Dark Grown 1 (DG1... 66 3e-027
gb|CW222301.1|CW222301 104_657_11202303_148_37174_052 Sorgh... 122 3e-026
gb|BZ350862.1|BZ350862 ht61f07.g1 WGS-SbicolorF (JM107 adap... 77 3e-026
gb|CN143608.1|CN143608 WOUND1_17_G06.b1_A002 Wounded leaves... 121 4e-026
gb|CN143696.1|CN143696 WOUND1_17_G06.g1_A002 Wounded leaves... 121 4e-026
gb|CW079348.1|CW079348 104_400_10899868_114_32401_010 Sorgh... 100 1e-025
gb|CW071497.1|CW071497 104_323_10591543_116_30454 Sorghum m... 113 3e-025
gb|CW194291.1|CW194291 104_617_11180020_116_36786_008 Sorgh... 76 3e-025
gb|CW186709.1|CW186709 104_604_11166709_116_36709_051 Sorgh... 118 3e-025
gb|CW258266.1|CW258266 104_724_11227784_148_35167_030 Sorgh... 59 5e-025
gb|CW439870.1|CW439870 fsbb001f158d16k0 Sorghum methylation... 59 5e-025
gb|CW353056.1|CW353056 fsbb001f015k03f0 Sorghum methylation... 76 2e-024
gb|CW208270.1|CW208270 104_637_11188585_116_37043_003 Sorgh... 69 2e-024
gb|CW140602.1|CW140602 104_531_11135871_148_34920_060 Sorgh... 76 4e-024
gb|BI211968.1|BI211968 IP1_62_G05.b1_A002 Immature pannicle... 60 3e-023
gb|CN139882.1|CN139882 OX1_24_E09.g1_A002 Oxidatively-stres... 84 5e-023
gb|CW445621.1|CW445621 fsbb001f170n20k0 Sorghum methylation... 71 6e-023
gb|CX617895.1|CX617895 GABR1_36_B02.g1_A002 GA- or brassino... 77 7e-023
gb|CX609752.1|CX609752 ANR1_14_B11.g1_A002 Anaerobic roots ... 82 1e-022
gb|CW464152.1|CW464152 fsbb001f213e01k0 Sorghum methylation... 98 1e-021
gb|CW448537.1|CW448537 fsbb001f182d10k0 Sorghum methylation... 75 2e-021
gb|CW339592.1|CW339592 104_840_11485351_116_36138_026 Sorgh... 105 2e-021
gb|BZ329364.1|BZ329364 hv85d06.b1 WGS-SbicolorF (JM107 adap... 105 2e-021
gb|CW273594.1|CW273594 104_746_11403983_116_35364_094 Sorgh... 95 3e-021
gb|CW331180.1|CW331180 104_828_11480770_116_36026_041 Sorgh... 69 3e-021
gb|CW351984.1|CW351984 fsbb001f014a08k0 Sorghum methylation... 105 3e-021
gb|CN152126.1|CN152126 WOUND1_80_A04.b1_A002 Wounded leaves... 104 4e-021
gb|CW471409.1|CW471409 fsbb001f225e14f0 Sorghum methylation... 104 6e-021
gb|CX612469.1|CX612469 GABR1_2_D03.g1_A002 GA- or brassinol... 81 2e-020
gb|CW188089.1|CW188089 104_607_11172835_148_36722_068 Sorgh... 64 3e-020
gb|CX613072.1|CX613072 GABR1_6_C10.b1_A002 GA- or brassinol... 96 7e-020
gb|BE592413.1|BE592413 WS1_94_D11.g1_A002 Water-stressed 1 ... 100 1e-019
gb|CD424257.1|CD424257 SA1_4_H11.b1_A002 Salicylic acid-tre... 100 1e-019
gb|CW165082.1|CW165082 104_573_11152317_148_36475_091 Sorgh... 58 2e-019
gb|BE363463.1|BE363463 WS1_63_B11.g1_A002 Water-stressed 1 ... 98 5e-019
gb|CW176273.1|CW176273 104_589_11158401_116_36586_045 Sorgh... 82 6e-019
gb|BE365886.1|BE365886 PI1_2_B05.b1_A002 Pathogen induced 1... 77 9e-019
gb|BG739344.1|BG739344 EM1_81_G11.g1_A002 Embryo 1 (EM1) So... 70 1e-018
gb|BF588386.1|BF588386 FM1_36_A10.g1_A003 Floral-Induced Me... 70 1e-018
gb|BE593832.1|BE593832 WS1_102_H06.g1_A002 Water-stressed 1... 70 1e-018
gb|CD208904.1|CD208904 HS1_45_C10.b1_A012 Heat-shocked seed... 70 1e-018
gb|BE355204.1|BE355204 DG1_10_H02.g1_A002 Dark Grown 1 (DG1... 70 1e-018
gb|CW090129.1|CW090129 104_435_10949104_116_32613_050 Sorgh... 96 1e-018
gb|CW255633.1|CW255633 104_720_11226343_148_35134_026 Sorgh... 50 4e-018
gb|CW077546.1|CW077546 104_382_10892899_148_31762_115 Sorgh... 92 4e-018
gb|CW090128.1|CW090128 104_435_10949104_114_32612_050 Sorgh... 94 7e-018
gb|CF758077.1|CF758077 DSAF1_27_A03.g1_A011 Drought-stresse... 92 3e-017
gb|CW499007.1|CW499007 fsbb001f293i23f0 Sorghum methylation... 83 4e-017
gb|CW220527.1|CW220527 104_655_11197397_116_37153_027 Sorgh... 52 4e-017
gb|CW311232.1|CW311232 104_800_11470125_148_35757_085 Sorgh... 52 5e-017
gb|CW194265.1|CW194265 104_617_11180005_148_36791_057 Sorgh... 52 5e-017
gb|CW251944.1|CW251944 104_714_11224217_116_35068_067 Sorgh... 84 5e-017
gb|CN131390.1|CN131390 RHOH1_47_E11.g1_A002 Acid- and alkal... 84 5e-017
gb|CW461851.1|CW461851 fsbb001f209l10k0 Sorghum methylation... 50 8e-017
gb|CD229432.1|CD229432 CCC1_15_E01.g1_A007 Callus culture/c... 90 8e-017
gb|CN147316.1|CN147316 WOUND1_49_A07.b1_A002 Wounded leaves... 83 9e-017
gb|CW073815.1|CW073815 104_340_10781690_116_31470_170 Sorgh... 83 9e-017
gb|CW271688.1|CW271688 104_744_11403133_116_36221_063 Sorgh... 49 1e-016
gb|CW464151.1|CW464151 fsbb001f213e01f0 Sorghum methylation... 67 1e-016
gb|BZ694054.1|BZ694054 SP__Ba0042B06.r SP__Ba Sorghum propi... 79 2e-016
gb|CW235334.1|CW235334 104_690_11214926_116_37408_053 Sorgh... 89 2e-016
gb|CW235335.1|CW235335 104_690_11214926_148_37412_053 Sorgh... 89 2e-016
gb|CD423222.1|CD423222 SA1_27_B10.g1_A002 Salicylic acid-tr... 89 2e-016
gb|CD424325.1|CD424325 SA1_4_H11.g1_A002 Salicylic acid-tre... 89 2e-016
gb|CW200592.1|CW200592 104_626_11184133_148_36870_061 Sorgh... 83 3e-016
gb|CW359305.1|CW359305 fsbb001f026n23k0 Sorghum methylation... 87 8e-016
gb|CB924558.1|CB924558 ABA1_21_C11.g1_A012 Abscisic acid-tr... 87 8e-016
gb|CB927879.1|CB927879 ABA1_34_D08.g1_A012 Abscisic acid-tr... 87 8e-016
gb|CD207192.1|CD207192 HS1_27_H05.g1_A012 Heat-shocked seed... 87 8e-016
gb|CD231789.1|CD231789 SS1_23_H09.g1_A012 Salt-stressed see... 87 8e-016
gb|CW030917.1|CW030917 104_259_10500498_116_30398 Sorghum m... 78 8e-016
gb|CW416941.1|CW416941 fsbb001f117l12f0 Sorghum methylation... 78 8e-016
gb|BE599173.1|BE599173 PI1_86_C08.b1_A002 Pathogen induced ... 78 8e-016
gb|CF432574.1|CF432574 NIT1_17_E08.g1_A002 Nitrogen-deficie... 87 1e-015
gb|CW394228.1|CW394228 fsbb001f081l09k0 Sorghum methylation... 84 1e-015
gb|CW432107.1|CW432107 fsbb001f146k07k0 Sorghum methylation... 86 1e-015
gb|AI724956.1|AI724956 RHIZ1_31_H10.y3_A001 Rhizome1 (RHIZ1... 86 1e-015
gb|CF432526.1|CF432526 NIT1_17_E08.b1_A002 Nitrogen-deficie... 86 1e-015
gb|CW255632.1|CW255632 104_720_11226343_116_35130_026 Sorgh... 60 2e-015
gb|CW427570.1|CW427570 fsbb001f139k07k0 Sorghum methylation... 86 2e-015
gb|CW359304.1|CW359304 fsbb001f026n23f0 Sorghum methylation... 85 3e-015
gb|BZ344833.1|BZ344833 hr40h09.b1 WGS-SbicolorF (JM107 adap... 85 4e-015
gb|CW141369.1|CW141369 104_532_11136279_116_34934_060 Sorgh... 85 4e-015
gb|CW271687.1|CW271687 104_744_11403133_116_35346_063 Sorgh... 43 5e-015
gb|CW231701.1|CW231701 104_681_11211263_148_37351_096 Sorgh... 65 7e-015
gb|CW408015.1|CW408015 fsbb001f101l18f0 Sorghum methylation... 66 1e-014
gb|CW230339.1|CW230339 104_679_11210489_116_37331_079 Sorgh... 83 1e-014
gb|CD235758.1|CD235758 SS1_37_F06.g1_A012 Salt-stressed see... 82 3e-014
gb|CX608451.1|CX608451 ANR1_38_E05.g1_A002 Anaerobic roots ... 82 3e-014
gb|CX619759.1|CX619759 GABR1_47_D08.g1_A002 GA- or brassino... 82 3e-014
gb|CW408016.1|CW408016 fsbb001f101l18k0 Sorghum methylation... 66 3e-014
gb|BE599008.1|BE599008 PI1_86_C08.g1_A002 Pathogen induced ... 78 5e-014
gb|CW215264.1|CW215264 104_647_11194448_148_37463_024 Sorgh... 78 5e-014
gb|BZ346611.1|BZ346611 hv82a12.b1 WGS-SbicolorF (JM107 adap... 81 5e-014
gb|CL152124.1|CL152124 104_335_10779736_116_31364_136 Sorgh... 81 5e-014
gb|CW059926.1|CW059926 104_303_10519581_5_30087 Sorghum met... 81 5e-014
gb|CW130609.1|CW130609 104_513_11115210_148_34779_077 Sorgh... 81 5e-014
gb|CW213087.1|CW213087 104_644_11191363_116_37026_072 Sorgh... 81 5e-014
gb|CW315075.1|CW315075 104_806_11472165_148_35827_095 Sorgh... 81 5e-014
gb|CW023465.1|CW023465 104_163_10432464_1_30001 Sorghum met... 68 7e-014
gb|BM318057.1|BM318057 PI1_78_A06.g9_A002 Pathogen induced ... 80 9e-014
gb|CW247168.1|CW247168 104_708_11221650_116_35018_077 Sorgh... 71 1e-013
gb|CW262711.1|CW262711 104_730_11230230_116_35224_023 Sorgh... 75 1e-013
gb|CW788141.1|CW788141 SP__Ba0042B06.r SP__Ba Sorghum propi... 79 2e-013
gb|CW416942.1|CW416942 fsbb001f117l12k0 Sorghum methylation... 78 2e-013
gb|CW234719.1|CW234719 104_688_11214180_148_37391_038 Sorgh... 70 3e-013
gb|CW053185.1|CW053185 104_293_10515824_114_30185 Sorghum m... 79 3e-013
gb|CW252368.1|CW252368 104_715_11224460_148_35093_074 Sorgh... 79 3e-013
gb|CN152193.1|CN152193 WOUND1_80_A04.g1_A002 Wounded leaves... 79 3e-013
gb|CW031048.1|CW031048 104_259_10500576_114_30397 Sorghum m... 65 4e-013
gb|CW304120.1|CW304120 104_788_11465610_148_35698_065 Sorgh... 60 4e-013
gb|CW215263.1|CW215263 104_647_11194448_116_37464_024 Sorgh... 78 5e-013
gb|CW236366.1|CW236366 104_692_11215579_116_37501_076 Sorgh... 78 5e-013
gb|CW296766.1|CW296766 104_778_11461690_116_35629_035 Sorgh... 78 5e-013
gb|CF432019.1|CF432019 NIT1_16_F12.g1_A002 Nitrogen-deficie... 78 5e-013
gb|BZ423489.1|BZ423489 id49h06.g1 WGS-SbicolorF (DH5a methy... 78 6e-013
gb|BG273620.1|BG273620 OV2_27_H08.b1_A002 Ovary 2 (OV2) Sor... 78 6e-013
gb|CW296767.1|CW296767 104_778_11461690_148_35633_035 Sorgh... 68 1e-012
gb|CW029876.1|CW029876 104_257_10499927_114_30401 Sorghum m... 64 1e-012
gb|AW563237.1|AW563237 LG1_204_D08.g1_A002 Light Grown 1 (L... 70 1e-012
gb|CW172771.1|CW172771 104_584_11156470_116_36544_093 Sorgh... 71 2e-012
gb|CN127763.1|CN127763 RHOH1_24_H12.g3_A002 Acid- and alkal... 68 4e-012
gb|CW461850.1|CW461850 fsbb001f209l10f0 Sorghum methylation... 66 2e-011
gb|CW302340.1|CW302340 104_786_11464668_148_35667_040 Sorgh... 73 2e-011
gb|CF430358.1|CF430358 PH1_27_C01.g1_A002 Phosphorous-defic... 47 2e-011
gb|CW259290.1|CW259290 104_725_11228343_116_35184_056 Sorgh... 69 2e-011
gb|CW311231.1|CW311231 104_800_11470125_116_35753_085 Sorgh... 52 6e-011
gb|BE355205.1|BE355205 DG1_10_G04.g1_A002 Dark Grown 1 (DG1... 65 6e-011
gb|CB926952.1|CB926952 ABA1_11_E07.g1_A012 Abscisic acid-tr... 70 1e-010
gb|BE361897.1|BE361897 DG1_83_C04.b1_A002 Dark Grown 1 (DG1... 67 1e-010
gb|CF760595.1|CF760595 DSAF1_63_D01.b1_A011 Drought-stresse... 67 1e-010
gb|CX606328.1|CX606328 ANR1_2_A04.g1_A002 Anaerobic roots S... 53 1e-010
gb|CL192003.1|CL192003 104_414_10939937_114_32245_071 Sorgh... 69 2e-010
gb|CW222300.1|CW222300 104_657_11202303_116_37173_052 Sorgh... 57 2e-010
gb|CW791231.1|CW791231 SP__Ba0077I13.r SP__Ba Sorghum propi... 69 3e-010
gb|BE600316.1|BE600316 PI1_94_H11.g1_A002 Pathogen induced ... 68 5e-010
gb|BG558804.1|BG558804 RHIZ2_56_G08.b1_A003 Rhizome2 (RHIZ2... 68 7e-010
gb|BZ343984.1|BZ343984 hp58d09.b2 WGS-SbicolorF (JM107 adap... 67 1e-009
gb|CW372862.1|CW372862 fsbb001f048p10f0 Sorghum methylation... 67 1e-009
gb|BE362340.1|BE362340 DG1_86_A10.b1_A002 Dark Grown 1 (DG1... 67 1e-009
gb|CX621405.1|CX621405 GABR1_58_A01.b1_A002 GA- or brassino... 66 2e-009
gb|CF072555.1|CF072555 FE1_3_D02.g1_A002 Iron-deficient see... 66 2e-009
gb|CW482066.1|CW482066 fsbb001f241p11k0 Sorghum methylation... 59 3e-009
gb|CW194264.1|CW194264 104_617_11180005_116_36787_057 Sorgh... 41 1e-008
gb|CW252367.1|CW252367 104_715_11224460_116_35097_074 Sorgh... 41 1e-008
gb|CD423783.1|CD423783 SA1_1_E11.b1_A002 Salicylic acid-tre... 53 3e-008
gb|CL158207.1|CL158207 104_346_10803385_116_31376_361 Sorgh... 40 4e-008
gb|BZ422124.1|BZ422124 id49h06.b1 WGS-SbicolorF (DH5a methy... 62 4e-008
gb|CW049940.1|CW049940 104_289_10514355_115_30204 Sorghum m... 62 4e-008
gb|CW187934.1|CW187934 104_607_11172750_148_36727_023 Sorgh... 62 4e-008
gb|CW235267.1|CW235267 104_690_11214890_116_37410_007 Sorgh... 62 4e-008
gb|CW482181.1|CW482181 fsbb001f242c09f0 Sorghum methylation... 62 4e-008
gb|CW065572.1|CW065572 104_312_10523225_114_30128 Sorghum m... 53 5e-008
gb|CW121115.1|CW121115 104_498_11109715_116_34649_066 Sorgh... 61 6e-008
gb|CD220328.1|CD220328 CCC1_66_E03.g1_A007 Callus culture/c... 61 6e-008
gb|CN134995.1|CN134995 OX1_29_H04.g1_A002 Oxidatively-stres... 61 8e-008
gb|CW362993.1|CW362993 fsbb001f034f02f0 Sorghum methylation... 61 8e-008
gb|CW251599.1|CW251599 104_714_11224020_148_35073_044 Sorgh... 43 1e-007
gb|CD234219.1|CD234219 SS1_26_B12.b1_A012 Salt-stressed see... 52 1e-007
gb|CD423579.1|CD423579 SA1_24_E02.b1_A002 Salicylic acid-tr... 54 1e-007
gb|CW494697.1|CW494697 fsbb001f286b24k0 Sorghum methylation... 54 1e-007
gb|CL185925.1|CL185925 104_400_10899868_116_32405_010 Sorgh... 60 1e-007
gb|CW094071.1|CW094071 104_457_11000117_116_37473_023 Sorgh... 60 1e-007
gb|CW046323.1|CW046323 104_283_10510123_115_30138 Sorghum m... 59 2e-007
gb|CW373427.1|CW373427 fsbb001f049n04f0 Sorghum methylation... 43 2e-007
gb|CW396384.1|CW396384 fsbb001f084m22f0 Sorghum methylation... 59 3e-007
gb|CW117751.1|CW117751 104_493_11107822_148_34613_081 Sorgh... 54 5e-007
gb|CF757766.1|CF757766 DSAF1_22_A08.g1_A011 Drought-stresse... 58 5e-007
gb|CW327532.1|CW327532 104_823_11478800_116_35982_028 Sorgh... 44 6e-007
gb|CW345533.1|CW345533 104_848_11488543_116_36209_022 Sorgh... 57 7e-007
gb|CW465136.1|CW465136 fsbb001f215m01f0 Sorghum methylation... 57 7e-007
gb|CW029877.1|CW029877 104_257_10499927_116_30402 Sorghum m... 44 8e-007
gb|CW065573.1|CW065573 104_312_10523225_115_30130 Sorghum m... 57 1e-006
gb|CW445620.1|CW445620 fsbb001f170n20f0 Sorghum methylation... 56 2e-006
gb|BG558803.1|BG558803 RHIZ2_56_G07.b1_A003 Rhizome2 (RHIZ2... 55 4e-006
gb|CW114398.1|CW114398 104_489_11105970_148_34566_077 Sorgh... 47 4e-006
gb|CF761525.1|CF761525 DSAF1_77_D02.b1_A011 Drought-stresse... 44 4e-006
gb|CD212702.1|CD212702 HS1_16_E02.b1_A012 Heat-shocked seed... 49 6e-006
gb|CF427259.1|CF427259 PH1_4_B12.g1_A002 Phosphorous-defici... 35 6e-006
gb|BG322694.1|BG322694 EM1_13_B08.b1_A002 Embryo 1 (EM1) So... 54 7e-006
gb|CW271690.1|CW271690 104_744_11403133_148_36222_063 Sorgh... 40 1e-005
gb|CW422442.1|CW422442 fsbb001f131l15k0 Sorghum methylation... 44 1e-005
gb|CW158010.1|CW158010 104_561_11147826_116_36390_069 Sorgh... 53 2e-005
gb|BG357101.1|BG357101 OV2_9_H07.b1_A002 Ovary 2 (OV2) Sorg... 43 2e-005
gb|BM318634.1|BM318634 PI1_15_H03.b9_A002 Pathogen induced ... 43 2e-005
gb|BZ340466.1|BZ340466 ic39b03.b1 WGS-SbicolorF (JM107 adap... 52 2e-005
gb|CW344134.1|CW344134 104_846_11487796_148_36191_004 Sorgh... 52 2e-005
gb|CW165081.1|CW165081 104_573_11152317_116_36470_091 Sorgh... 46 3e-005
gb|CL183652.1|CL183652 104_396_10898313_116_31924_153 Sorgh... 51 5e-005
gb|BZ339999.1|BZ339999 ic36b03.b1 WGS-SbicolorF (JM107 adap... 51 6e-005
gb|CW435646.1|CW435646 fsbb001f151o11k0 Sorghum methylation... 51 6e-005
gb|CW487669.1|CW487669 fsbb001f253k10f0 Sorghum methylation... 51 6e-005
gb|BG356784.1|BG356784 OV2_9_H07.g1_A002 Ovary 2 (OV2) Sorg... 51 6e-005
gb|BM317765.1|BM317765 WS1_63_B11.b9_A002 Water-stressed 1 ... 51 6e-005
gb|CW080163.1|CW080163 104_407_10905793_114_32475_001 Sorgh... 38 6e-005
gb|CW160452.1|CW160452 104_567_11149892_148_36508_080 Sorgh... 50 1e-004
gb|BM324085.1|BM324085 PIC1_24_A09.b1_A002 Pathogen-infecte... 38 1e-004
gb|CW094072.1|CW094072 104_457_11000117_148_37474_023 Sorgh... 33 2e-004
gb|CW079762.1|CW079762 104_403_10900980_114_32462_044 Sorgh... 35 2e-004
gb|CL187570.1|CL187570 104_403_10900980_116_32466_044 Sorgh... 35 2e-004
gb|CW090097.1|CW090097 104_435_10949085_116_32594_083 Sorgh... 35 2e-004
gb|CW146572.1|CW146572 104_539_11139064_148_34987_056 Sorgh... 43 2e-004
gb|CW086036.1|CW086036 104_429_10946729_116_32519_069 Sorgh... 49 2e-004
gb|CW179882.1|CW179882 104_594_11160344_148_36631_028 Sorgh... 49 2e-004
gb|CW359881.1|CW359881 fsbb001f027l10f0 Sorghum methylation... 49 2e-004
gb|CW073642.1|CW073642 104_338_10780774_116_31370_022 Sorgh... 40 3e-004
gb|CW491698.1|CW491698 fsbb001f281k20f0 Sorghum methylation... 33 3e-004
gb|CW326666.1|CW326666 104_822_11478338_148_35969_013 Sorgh... 49 3e-004
gb|CW421215.1|CW421215 fsbb001f128o21k0 Sorghum methylation... 49 3e-004
gb|CW228588.1|CW228588 104_668_11206459_116_37251_072 Sorgh... 48 4e-004
gb|CW228589.1|CW228589 104_668_11206459_148_37252_072 Sorgh... 48 4e-004
gb|CW489453.1|CW489453 fsbb001f274g10k0 Sorghum methylation... 37 6e-004
gb|CW061094.1|CW061094 104_304_10520214_114_30143 Sorghum m... 37 6e-004
gb|BG049199.1|BG049199 OV1_24_G07.g1_A002 Ovary 1 (OV1) Sor... 37 6e-004
gb|BE360496.1|BE360496 DG1_63_B01.g1_A002 Dark Grown 1 (DG1... 37 6e-004
gb|CW053186.1|CW053186 104_293_10515824_115_30191 Sorghum m... 47 8e-004
gb|CW320375.1|CW320375 104_813_11474981_148_35894_025 Sorgh... 47 0.001
gb|CF071859.1|CF071859 FE1_19_D04.b1_A002 Iron-deficient se... 47 0.001
gb|BG052533.1|BG052533 RHIZ2_26_D09.g1_A003 Rhizome2 (RHIZ2... 35 0.001
gb|BG465307.1|BG465307 EM1_74_F08.g1_A002 Embryo 1 (EM1) So... 35 0.001
gb|CW065569.1|CW065569 104_312_10523223_115_30130 Sorghum m... 46 0.001
gb|BF177171.1|BF177171 EM1_2_F03.b1_A002 Embryo 1 (EM1) Sor... 39 0.002
gb|CW371576.1|CW371576 fsbb001f047b14k0 Sorghum methylation... 46 0.002
gb|CW495712.1|CW495712 fsbb001f287j18f0 Sorghum methylation... 39 0.003
gb|CD211695.1|CD211695 HS1_63_A06.g1_A012 Heat-shocked seed... 40 0.003
gb|CW494696.1|CW494696 fsbb001f286b24f0 Sorghum methylation... 38 0.003
gb|CW217310.1|CW217310 104_650_11195588_148_37131_072 Sorgh... 46 0.003
gb|BE358812.1|BE358812 DG1_32_F10.b1_A002 Dark Grown 1 (DG1... 46 0.003
gb|CD205419.1|CD205419 HS1_14_D10.b1_A012 Heat-shocked seed... 46 0.003
gb|CW322746.1|CW322746 104_816_11476262_148_35955_053 Sorgh... 40 0.003
gb|CX621185.1|CX621185 GABR1_56_C03.g1_A002 GA- or brassino... 45 0.004
gb|CW165535.1|CW165535 104_573_11152555_148_36475_066 Sorgh... 39 0.005
gb|CW073814.1|CW073814 104_340_10781690_114_31469_170 Sorgh... 36 0.005
gb|CF429589.1|CF429589 PH1_23_G08.b1_A002 Phosphorous-defic... 38 0.005
gb|CF432338.1|CF432338 NIT1_13_C04.b1_A002 Nitrogen-deficie... 38 0.005
gb|BG051956.1|BG051956 RHIZ2_7_A09.g1_A003 Rhizome2 (RHIZ2)... 34 0.005
gb|AW563831.1|AW563831 LG1_272_B04.b1_A002 Light Grown 1 (L... 45 0.005
gb|AW671363.1|AW671363 LG1_335_F03.b1_A002 Light Grown 1 (L... 45 0.005
gb|CD428184.1|CD428184 ETH1_28_H12.b1_A002 Ethylene-treated... 45 0.005
gb|CD428287.1|CD428287 ETH1_28_H12.g1_A002 Ethylene-treated... 45 0.005
gb|CD428890.1|CD428890 ETH1_1_G01.b1_A002 Ethylene-treated ... 45 0.005
gb|CF430091.1|CF430091 PH1_26_B04.b1_A002 Phosphorous-defic... 45 0.005
gb|CF430141.1|CF430141 PH1_26_B04.g1_A002 Phosphorous-defic... 45 0.005
gb|CN133129.1|CN133129 OX1_10_G07.b1_A002 Oxidatively-stres... 45 0.005
gb|CN133174.1|CN133174 OX1_10_D01.g1_A002 Oxidatively-stres... 45 0.005
gb|CN133213.1|CN133213 OX1_10_G07.g1_A002 Oxidatively-stres... 45 0.005
gb|CN133248.1|CN133248 OX1_11_C01.b1_A002 Oxidatively-stres... 45 0.005
gb|CN133329.1|CN133329 OX1_11_C01.g1_A002 Oxidatively-stres... 45 0.005
gb|CN134319.1|CN134319 OX1_25_D05.g1_A002 Oxidatively-stres... 45 0.005
gb|CN138179.1|CN138179 OX1_62_E08.b1_A002 Oxidatively-stres... 45 0.005
gb|CN138261.1|CN138261 OX1_62_E08.g1_A002 Oxidatively-stres... 45 0.005
gb|CN138609.1|CN138609 OX1_64_G09.g1_A002 Oxidatively-stres... 45 0.005
gb|CN140835.1|CN140835 OX1_47_A09.g1_A002 Oxidatively-stres... 45 0.005
gb|CN143698.1|CN143698 WOUND1_17_G08.g1_A002 Wounded leaves... 45 0.005
gb|CN143938.1|CN143938 WOUND1_19_F07.b1_A002 Wounded leaves... 45 0.005
gb|CN144028.1|CN144028 WOUND1_19_F07.g1_A002 Wounded leaves... 45 0.005
gb|CN148705.1|CN148705 WOUND1_58_G01.b1_A002 Wounded leaves... 45 0.005
gb|CN148789.1|CN148789 WOUND1_58_G01.g1_A002 Wounded leaves... 45 0.005
gb|CN151736.1|CN151736 WOUND1_77_F12.b1_A002 Wounded leaves... 45 0.005
gb|CN151807.1|CN151807 WOUND1_77_F07.g1_A002 Wounded leaves... 45 0.005
gb|CX621068.1|CX621068 GABR1_55_G01.g1_A002 GA- or brassino... 45 0.005
gb|CW060766.1|CW060766 104_304_10520036_114_30143 Sorghum m... 44 0.007
gb|CW086531.1|CW086531 104_430_10947042_116_33018_071 Sorgh... 44 0.007
gb|CW179881.1|CW179881 104_594_11160344_116_36635_028 Sorgh... 44 0.007
gb|CW327533.1|CW327533 104_823_11478800_148_35981_028 Sorgh... 44 0.007
gb|CW327562.1|CW327562 104_823_11478815_116_35979_092 Sorgh... 44 0.007
gb|CW327563.1|CW327563 104_823_11478815_148_35980_092 Sorgh... 44 0.007
gb|CN137497.1|CN137497 OX1_57_E03.g1_A002 Oxidatively-stres... 44 0.007
gb|CW374662.1|CW374662 fsbb001f051k04f0 Sorghum methylation... 37 0.008
gb|CW095685.1|CW095685 104_461_11001466_148_34329_047 Sorgh... 40 0.010
gb|CW242895.1|CW242895 104_702_11219586_148_37561_067 Sorgh... 31 0.013
gb|CW310297.1|CW310297 104_799_11469641_116_35745_073 Sorgh... 43 0.014
gb|CW392927.1|CW392927 fsbb001f079m08k0 Sorghum methylation... 43 0.014
gb|BE360430.1|BE360430 DG1_63_B01.b1_A002 Dark Grown 1 (DG1... 37 0.015
gb|CN135995.1|CN135995 OX1_40_E01.b1_A002 Oxidatively-stres... 38 0.015
gb|BZ422782.1|BZ422782 id58c04.b1 WGS-SbicolorF (DH5a methy... 36 0.016
gb|CW034279.1|CW034279 104_264_10502457_114_30358 Sorghum m... 43 0.019
gb|AW670994.1|AW670994 LG1_278_E12.b1_A002 Light Grown 1 (L... 43 0.019
gb|CN148505.1|CN148505 WOUND1_57_B09.b1_A002 Wounded leaves... 43 0.019
gb|CW108775.1|CW108775 104_480_11097704_148_34498_022 Sorgh... 36 0.021
gb|CN141473.1|CN141473 OX1_51_H07.g1_A002 Oxidatively-stres... 35 0.021
gb|CX621109.1|CX621109 GABR1_56_C03.b1_A002 GA- or brassino... 42 0.026
gb|CW149009.1|CW149009 104_547_11142258_148_35009_065 Sorgh... 40 0.027
gb|CD230051.1|CD230051 SS1_40_F07.g1_A012 Salt-stressed see... 40 0.028
gb|CW351190.1|CW351190 fsbb001f012n13f0 Sorghum methylation... 27 0.033
gb|CW456570.1|CW456570 fsbb001f201p12k0 Sorghum methylation... 27 0.034
gb|CW058321.1|CW058321 104_300_10518673_5_30082 Sorghum met... 32 0.035
gb|CW498750.1|CW498750 fsbb001f293c10k0 Sorghum methylation... 34 0.038
gb|CX612093.1|CX612093 ANR1_28_A06.g1_A002 Anaerobic roots ... 35 0.038
gb|CW121812.1|CW121812 104_499_11110113_148_34659_033 Sorgh... 37 0.039
gb|CD430550.1|CD430550 ETH1_19_C10.g1_A002 Ethylene-treated... 26 0.044
gb|CW192253.1|CW192253 104_614_11178925_116_36943_053 Sorgh... 41 0.049
gb|CW195043.1|CW195043 104_618_11180428_116_36796_008 Sorgh... 37 0.053
gb|CW260865.1|CW260865 104_727_11229198_148_35202_019 Sorgh... 41 0.067
gb|BF586282.1|BF586282 FM1_27_H12.b1_A003 Floral-Induced Me... 41 0.067
gb|BM326301.1|BM326301 PIC1_55_C08.b1_A002 Pathogen-infecte... 41 0.067
gb|CN133214.1|CN133214 OX1_10_G08.g1_A002 Oxidatively-stres... 36 0.070
gb|BE600078.1|BE600078 PI1_79_A12.b1_A002 Pathogen induced ... 36 0.071
gb|CL192004.1|CL192004 104_414_10939937_116_32249_071 Sorgh... 40 0.092
gb|CW322328.1|CW322328 104_816_11476038_116_35950_029 Sorgh... 40 0.092
gb|AW745106.1|AW745106 LG1_386_F11.b1_A002 Light Grown 1 (L... 40 0.092
gb|CD233097.1|CD233097 SS1_11_B04.g1_A012 Salt-stressed see... 40 0.092
gb|CD425699.1|CD425699 SA1_14_F08.b1_A002 Salicylic acid-tr... 40 0.092
gb|CL181909.1|CL181909 104_393_10897063_148_31921_055 Sorgh... 39 0.093
gb|CD208327.1|CD208327 HS1_37_F12.b1_A012 Heat-shocked seed... 31 0.095
gb|CW156320.1|CW156320 104_559_11146623_116_36371_060 Sorgh... 31 0.095
gb|CW204537.1|CW204537 104_632_11186595_116_36917_006 Sorgh... 31 0.095
gb|CD210418.1|CD210418 HS1_51_A09.b1_A012 Heat-shocked seed... 31 0.095
gb|AW924388.1|AW924388 WS1_69_F10.b1_A002 Water-stressed 1 ... 31 0.096
gb|CW331148.1|CW331148 104_828_11480753_116_36019_073 Sorgh... 40 0.098
gb|CW363416.1|CW363416 fsbb001f035a03f0 Sorghum methylation... 36 0.11
gb|CW271689.1|CW271689 104_744_11403133_148_35350_063 Sorgh... 40 0.13
gb|BE593525.1|BE593525 WS1_100_C12.b1_A002 Water-stressed 1... 40 0.13
gb|BG048351.1|BG048351 OV1_13_B04.b1_A002 Ovary 1 (OV1) Sor... 40 0.13
gb|BG558519.1|BG558519 RHIZ2_56_G07.g1_A003 Rhizome2 (RHIZ2... 40 0.13
gb|BI139815.1|BI139815 IP1_45_G06.b1_A002 Immature pannicle... 40 0.13
gb|BI139816.1|BI139816 IP1_45_G07.b1_A002 Immature pannicle... 40 0.13
gb|CX620648.1|CX620648 GABR1_53_D07.b1_A002 GA- or brassino... 40 0.13
gb|CN131262.1|CN131262 RHOH1_46_G12.g1_A002 Acid- and alkal... 34 0.13
gb|BM331383.1|BM331383 PIC1_65_D12.g1_A002 Pathogen-infecte... 29 0.13
gb|CW279343.1|CW279343 104_754_11407028_148_35438_078 Sorgh... 31 0.13
gb|CW343756.1|CW343756 104_846_11487596_148_36195_078 Sorgh... 28 0.13
gb|CW410634.1|CW410634 fsbb001f105h15k0 Sorghum methylation... 35 0.16
gb|CW111936.1|CW111936 104_485_11104608_148_34536_088 Sorgh... 35 0.17
gb|BE355591.1|BE355591 DG1_115_B07.b1_A002 Dark Grown 1 (DG... 35 0.17
gb|CN140144.1|CN140144 OX1_34_G10.b1_A002 Oxidatively-stres... 29 0.17
gb|CW417125.1|CW417125 fsbb001f117p18f0 Sorghum methylation... 35 0.17
gb|CW023004.1|CW023004 104_162_10432183_1_30008 Sorghum met... 40 0.17
gb|BM318396.1|BM318396 PI1_13_B03.b9_A002 Pathogen induced ... 29 0.18
gb|CW437291.1|CW437291 fsbb001f154f11f0 Sorghum methylation... 29 0.18
gb|CL191862.1|CL191862 104_414_10939844_114_32246_076 Sorgh... 35 0.22
gb|CW396440.1|CW396440 fsbb001f084o02k0 Sorghum methylation... 35 0.23
gb|CN148687.1|CN148687 WOUND1_58_E01.b1_A002 Wounded leaves... 29 0.24
gb|CW383212.1|CW383212 fsbb001f065j12k0 Sorghum methylation... 39 0.24
gb|BG412031.1|BG412031 OV2_37_B08.b1_A002 Ovary 2 (OV2) Sor... 39 0.24
gb|CX612378.1|CX612378 GABR1_2_D03.b1_A002 GA- or brassinol... 39 0.24
gb|CW378672.1|CW378672 fsbb001f057i18k0 Sorghum methylation... 35 0.24
gb|CW212836.1|CW212836 104_644_11191234_148_37032_045 Sorgh... 35 0.25
gb|CN151193.1|CN151193 WOUND1_74_A07.b1_A002 Wounded leaves... 29 0.26
gb|CW088127.1|CW088127 104_433_10948024_116_32578_064 Sorgh... 36 0.28
gb|CW200591.1|CW200591 104_626_11184133_116_36869_061 Sorgh... 36 0.30
gb|CW167449.1|CW167449 104_576_11153610_148_36488_069 Sorgh... 35 0.32
gb|CL185169.1|CL185169 104_399_10899340_116_32397_016 Sorgh... 36 0.32
gb|CW228052.1|CW228052 104_667_11206149_116_37239_083 Sorgh... 35 0.32
gb|CN150946.1|CN150946 WOUND1_72_B02.g1_A002 Wounded leaves... 30 0.32
gb|CW421214.1|CW421214 fsbb001f128o21f0 Sorghum methylation... 35 0.32
gb|CW121811.1|CW121811 104_499_11110113_116_34663_033 Sorgh... 39 0.33
gb|CW236571.1|CW236571 104_692_11215686_116_37498_021 Sorgh... 39 0.33
gb|CW242666.1|CW242666 104_702_11219465_148_37564_073 Sorgh... 39 0.33
gb|CW307323.1|CW307323 104_795_11468079_148_35735_058 Sorgh... 39 0.33
gb|CW396385.1|CW396385 fsbb001f084m22k0 Sorghum methylation... 39 0.33
gb|CW410022.1|CW410022 fsbb001f104j13f0 Sorghum methylation... 39 0.33
gb|BI245955.1|BI245955 IP1_65_G02.b1_A002 Immature pannicle... 39 0.33
gb|CW411512.1|CW411512 fsbb001f106l13f0 Sorghum methylation... 34 0.38
gb|BE358196.1|BE358196 DG1_26_C08.b2_A002 Dark Grown 1 (DG1... 34 0.39
gb|CW216049.1|CW216049 104_648_11194906_148_37115_035 Sorgh... 36 0.40
gb|CL190892.1|CL190892 104_409_10906396_116_32499_010 Sorgh... 33 0.43
gb|CD208047.1|CD208047 HS1_36_D04.g1_A012 Heat-shocked seed... 30 0.43
gb|CB928391.1|CB928391 ABA1_15_A11.g1_A012 Abscisic acid-tr... 30 0.43
gb|CW089714.1|CW089714 104_435_10948865_114_32588_075 Sorgh... 24 0.45
gb|BZ349334.1|BZ349334 hq90c12.g1 WGS-SbicolorF (JM107 adap... 38 0.45
gb|CW028623.1|CW028623 104_255_10499202_116_30393 Sorghum m... 38 0.45
gb|CW102576.1|CW102576 104_470_11011418_116_34419_001 Sorgh... 38 0.45
gb|CW288504.1|CW288504 104_767_11411987_148_35539_048 Sorgh... 38 0.45
gb|CW302767.1|CW302767 104_787_11464890_116_35677_079 Sorgh... 38 0.45
gb|CW382139.1|CW382139 fsbb001f063o03f0 Sorghum methylation... 38 0.45
gb|BE360478.1|BE360478 DG1_63_D04.g1_A002 Dark Grown 1 (DG1... 38 0.45
gb|CW501703.1|CW501703 fsbb001f297k14f0 Sorghum methylation... 34 0.46
gb|BE360367.1|BE360367 DG1_63_B10.b1_A002 Dark Grown 1 (DG1... 36 0.46
gb|CD425110.1|CD425110 SA1_10_F07.g1_A002 Salicylic acid-tr... 32 0.50
gb|CW031141.1|CW031141 104_259_10500633_114_30397 Sorghum m... 34 0.51
gb|CW303461.1|CW303461 104_788_11465250_148_35696_079 Sorgh... 32 0.54
gb|CW390593.1|CW390593 fsbb001f076f01k0 Sorghum methylation... 32 0.55
gb|BZ781474.1|BZ781474 ii29g06.g1 WGS-SbicolorF (DH5a methy... 36 0.57
gb|CW452295.1|CW452295 fsbb001f192m06f0 Sorghum methylation... 32 0.57
gb|CW329926.1|CW329926 104_826_11480102_148_35997_053 Sorgh... 32 0.57
gb|CL161843.1|CL161843 104_353_10806000_116_31829_288 Sorgh... 31 0.58
gb|CW318970.1|CW318970 104_811_11474239_116_35880_026 Sorgh... 30 0.58
gb|CX621089.1|CX621089 GABR1_56_A02.b1_A002 GA- or brassino... 31 0.58
gb|CN146447.1|CN146447 WOUND1_41_F07.b1_A002 Wounded leaves... 36 0.60
gb|BF655990.1|BF655990 FM1_42_E08.b1_A003 Floral-Induced Me... 30 0.60
gb|CL196677.1|CL196677 104_423_10943213_116_32331_031 Sorgh... 32 0.60
gb|CL187277.1|CL187277 104_402_10900772_114_32431_068 Sorgh... 38 0.62
gb|CW034025.1|CW034025 104_263_10502302_114_30359 Sorghum m... 38 0.62
gb|CW060495.1|CW060495 104_303_10519883_5_30087 Sorghum met... 38 0.62
gb|CW134337.1|CW134337 104_518_11117253_116_34820_087 Sorgh... 38 0.62
gb|CW251251.1|CW251251 104_713_11223828_148_35061_036 Sorgh... 38 0.62
gb|CW264519.1|CW264519 104_733_11231343_116_35253_058 Sorgh... 38 0.62
gb|CW312499.1|CW312499 104_802_11470791_148_35778_058 Sorgh... 38 0.62
gb|CW321494.1|CW321494 104_814_11475584_148_35939_018 Sorgh... 38 0.62
gb|CD213676.1|CD213676 HS1_52_B05.g1_A012 Heat-shocked seed... 38 0.62
gb|CN133850.1|CN133850 OX1_18_E08.g1_A002 Oxidatively-stres... 38 0.62
gb|CN136184.1|CN136184 OX1_41_F11.b1_A002 Oxidatively-stres... 36 0.66
gb|CW488211.1|CW488211 fsbb001f254h21f0 Sorghum methylation... 29 0.68
gb|CW425305.1|CW425305 fsbb001f136c04k0 Sorghum methylation... 33 0.68
gb|CW384884.1|CW384884 fsbb001f068b21f0 Sorghum methylation... 33 0.73
gb|BZ340467.1|BZ340467 ic39b03.g1 WGS-SbicolorF (JM107 adap... 33 0.73
gb|CF430195.1|CF430195 PH1_26_A08.g1_A002 Phosphorous-defic... 33 0.75
gb|CW309573.1|CW309573 104_798_11469264_148_35742_090 Sorgh... 33 0.75
gb|CW233758.1|CW233758 104_687_11213616_116_37384_094 Sorgh... 35 0.77
gb|CN140772.1|CN140772 OX1_47_A09.b1_A002 Oxidatively-stres... 37 0.77
gb|CW359084.1|CW359084 fsbb001f026i22f0 Sorghum methylation... 28 0.78
gb|CW152593.1|CW152593 104_553_11144574_148_36330_017 Sorgh... 29 0.78
gb|CW152592.1|CW152592 104_553_11144574_116_36325_017 Sorgh... 29 0.79
gb|CW456270.1|CW456270 fsbb001f201i17f0 Sorghum methylation... 29 0.79
gb|CN150788.1|CN150788 WOUND1_71_B01.g1_A002 Wounded leaves... 30 0.80
gb|CW039225.1|CW039225 104_271_10505374_114_30387 Sorghum m... 37 0.85
gb|CW060270.1|CW060270 104_303_10519764_5_30087 Sorghum met... 37 0.85
gb|CW234653.1|CW234653 104_688_11214138_116_37392_071 Sorgh... 37 0.85
gb|CW296926.1|CW296926 104_778_11461773_148_35634_081 Sorgh... 37 0.85
gb|CW388965.1|CW388965 fsbb001f073p06k0 Sorghum methylation... 37 0.85
gb|BE598763.1|BE598763 PI1_82_F05.b1_A002 Pathogen induced ... 37 0.85
gb|BF657105.1|BF657105 OV2_18_G01.b1_A002 Ovary 2 (OV2) Sor... 37 0.85
gb|BG048801.1|BG048801 OV1_23_C02.b1_A002 Ovary 1 (OV1) Sor... 37 0.85
gb|BG933646.1|BG933646 OV1_32_H05.g1_A002 Ovary 1 (OV1) Sor... 37 0.85
gb|CB924907.1|CB924907 ABA1_28_F05.g1_A012 Abscisic acid-tr... 37 0.85
gb|CB926097.1|CB926097 ABA1_31_E02.g1_A012 Abscisic acid-tr... 37 0.85
gb|CN133093.1|CN133093 OX1_10_D01.b1_A002 Oxidatively-stres... 37 0.85
gb|CN133178.1|CN133178 OX1_10_D06.g1_A002 Oxidatively-stres... 37 0.85
gb|CN142212.1|CN142212 WOUND1_4_C04.g1_A002 Wounded leaves ... 37 0.85
gb|BE356084.1|BE356084 DG1_122_F10.b1_A002 Dark Grown 1 (DG... 30 0.85
gb|CD463951.1|CD463951 ETH1_47_C07.g1_A002 Ethylene-treated... 33 0.97
gb|AW746880.1|AW746880 WS1_56_E03.b1_A002 Water-stressed 1 ... 36 0.97
gb|CL189926.1|CL189926 104_407_10905719_114_32475_086 Sorgh... 28 0.99
gb|CB925621.1|CB925621 ABA1_22_D07.g1_A012 Abscisic acid-tr... 34 1.0
gb|CW412047.1|CW412047 fsbb001f107i03f0 Sorghum methylation... 30 1.1
gb|CW252450.1|CW252450 104_715_11224503_116_35096_056 Sorgh... 29 1.1
gb|CB926270.1|CB926270 ABA1_7_H01.g1_A012 Abscisic acid-tre... 32 1.1
gb|BG649816.1|BG649816 RHIZ2_83_H12.b1_A003 Rhizome2 (RHIZ2... 28 1.1
gb|CD229780.1|CD229780 CCC1_19_G07.g1_A007 Callus culture/c... 32 1.1
gb|BG605977.1|BG605977 RHIZ2_83_H12.g1_A003 Rhizome2 (RHIZ2... 28 1.1
gb|CW346079.1|CW346079 104_849_11488834_148_36219_041 Sorgh... 34 1.1
gb|CW478290.1|CW478290 fsbb001f236b18f0 Sorghum methylation... 26 1.1
gb|CL150284.1|CL150284 104_331_10778409_116_31356_345 Sorgh... 37 1.2
gb|CL190963.1|CL190963 104_409_10906451_114_32490_040 Sorgh... 37 1.2
gb|CL190964.1|CL190964 104_409_10906451_116_32498_040 Sorgh... 37 1.2
gb|CW065479.1|CW065479 104_312_10523170_115_30130 Sorghum m... 37 1.2
gb|CW145412.1|CW145412 104_538_11138452_148_34981_016 Sorgh... 37 1.2
>gb|CN129079.1|CN129079 RHOH1_33_H09.b3_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_33_H09_A002 3', mRNA sequence
Length = 733
Score = 491 bits (1067), Expect = e-137
Identities = 206/219 (94%), Positives = 210/219 (95%)
Frame = +1 / +2
Query: 1162 GQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIIDPETGLSLHRNQPGEIC 1341
GQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKI+DP+TGLSL RNQPGEIC
Sbjct: 2 GQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIVDPDTGLSLRRNQPGEIC 181
Query: 1342 IRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAP 1521
IRGKQLMKGYLNNPEATAKTID EGWL TGDIGYVDD DEIFIVDRLKELIKYKGFQVAP
Sbjct: 182 IRGKQLMKGYLNNPEATAKTIDDEGWLDTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAP 361
Query: 1522 AELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKR 1701
AELEAMLIAHPSI DAAVV MKDDSCGEIPVAFVV SGG +TEDEIKQYVAKQVVFYKR
Sbjct: 362 AELEAMLIAHPSIADAAVVPMKDDSCGEIPVAFVVTSGGYEMTEDEIKQYVAKQVVFYKR 541
Query: 1702 LHKIFFVEAIPKAPSGKILRKDLRAKLASGFSNGSSC*C 1818
LHK+FFVEAIPKAPSGKILRKDLRAKLASGFSNGSSC*C
Sbjct: 542 LHKVFFVEAIPKAPSGKILRKDLRAKLASGFSNGSSC*C 658
Score = 450 bits (976), Expect = e-125
Identities = 192/219 (87%), Positives = 194/219 (88%)
Frame = -2 / -2
Query: 1817 HQHDDPLENPDASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPE 1638
HQHDDPLENPDASFALRSFL+ILPDGALG+ASTKK LCSLL*NTTCFATYCLISSSVI
Sbjct: 657 HQHDDPLENPDASFALRSFLRILPDGALGIASTKKTLCSLL*NTTCFATYCLISSSVIS* 478
Query: 1637 PPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKIS 1458
PPD TTNATGISPQESSFI TTAAS MLGW ATWNPLYLMSSLS STMKIS
Sbjct: 477 PPDVTTNATGISPQESSFIGTTAASAMLGWAMSMASSSAGATWNPLYLMSSLSLSTMKIS 298
Query: 1457 SPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFS 1278
S SSTYPMSPV SHPS SMVFAVASGLLRYPFINCLPLMQISPGWLR RDSPVSGS I S
Sbjct: 297 SSSSTYPMSPVSSHPSSSMVFAVASGLLRYPFINCLPLMQISPGWLRRRDSPVSGSTILS 118
Query: 1277 SAFLTTVPQAPDFTGNGSLANAMHIESTGPASVIP*PCP 1161
SAFLTTVPQAPDFTGNGS ANAMHIESTGPASVIP PCP
Sbjct: 117 SAFLTTVPQAPDFTGNGSFANAMHIESTGPASVIPYPCP 1
Score = 185 bits (399), Expect(2) = 3e-091
Identities = 76/91 (83%), Positives = 80/91 (87%)
Frame = -1 / -1
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHR 1258
NVSGVQPP VDGLRR LRVVEVPFHQLLAPDANLPGLVA EGQPG+RVDDL LG+PHHR
Sbjct: 277 NVSGVQPPFIVDGLRRGLRVVEVPFHQLLAPDANLPGLVAAEGQPGVRVDDLELGVPHHR 98
Query: 1257 AAGTGLHR*RLLGKRHAHREHRACLCHPITL 1165
AAG GLHR RLL KRHAH EH +CLCHP+ L
Sbjct: 97 AAGAGLHRQRLLCKRHAH*EHGSCLCHPVPL 5
Score = 181 bits (389), Expect(3) = 2e-071
Identities = 75/92 (81%), Positives = 75/92 (81%)
Frame = -3 / -3
Query: 1441 TQCLRCAATPPSRWSSPLPPGC*GTLSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSP 1262
TQCLRC AT RWSSP PPGC*GTLSSTACP*CKSPRAGCGGGTAR PGR S AR SSP
Sbjct: 281 TQCLRCPATLHRRWSSPWPPGC*GTLSSTACP*CKSPRAGCGGGTARCPGRRS*ARRSSP 102
Query: 1261 PCRRHRTSPVTAPWQTPCTSRAPGLPLSSHNP 1166
PCRR RTSP TAP QTPCT RA LPLSS P
Sbjct: 101 PCRRRRTSPATAPLQTPCTLRARVLPLSSRTP 6
Score = 173 bits (372), Expect(2) = 3e-091
Identities = 77/101 (76%), Positives = 80/101 (79%)
Frame = -1 / -1
Query: 1818 ASTR*PVGESRRQLCSQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPG 1639
ASTR* +G+SRR LCSQILP NLA WRLGD LHEEDLVQPLVEHHLFRHVL DLVLG
Sbjct: 658 ASTR*SIGKSRR*LCSQILPQNLARWRLGDSLHEEDLVQPLVEHHLFRHVLFDLVLGHLV 479
Query: 1638 AAGRHDERHRDLAAGVILHLXXXXXXXXXXXDEHGLELRRS 1516
AAGRHDERHRDLAAGV+LH DEHGLELRRS
Sbjct: 478 AAGRHDERHRDLAAGVVLHWHDGGVGDAGVGDEHGLELRRS 356
Score = 167 bits (360), Expect(3) = 2e-068
Identities = 67/80 (83%), Positives = 72/80 (90%)
Frame = +3 / +1
Query: 1167 GLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQ 1346
G+ DDRGR AL+VHGVC+GAV GEVR LRHGGEE RA+D RPG RAVPPPQPARGDLHQ
Sbjct: 7 GVRDDRGRTRALNVHGVCKGAVAGEVRRLRHGGEERRAQDRRPGHRAVPPPQPARGDLHQ 186
Query: 1347 GQAVDERVPQQPGGNGEDHR 1406
GQAVDERVPQQPGG+GEDHR
Sbjct: 187 GQAVDERVPQQPGGHGEDHR 246
Score = 100 bits (213), Expect(2) = 7e-028
Identities = 43/55 (78%), Positives = 44/55 (80%)
Frame = +2 / +3
Query: 1166 RVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW*GMPS*RSSTRRPGCPSTATSP 1330
R G*QRQ CS+CAWRL RSR R*SP PAARW*G PS RSSTR PGCPS ATSP
Sbjct: 6 RGTG*QRQDPCSQCAWRLQRSRCR*SPAPAARW*GTPSSRSSTRTPGCPSAATSP 170
Score = 97.3 bits (206), Expect(3) = 2e-068
Identities = 42/52 (80%), Positives = 45/52 (86%)
Frame = +3 / +1
Query: 1662 QAVRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKAGVWILQRVIVLM 1817
Q VRGETGGVLQEAAQ LLRGG+PQGAI QD +EGSESKA VWI Q +IVLM
Sbjct: 502 QTVRGETGGVLQEAAQGLLRGGYPQGAIWQDSEEGSESKASVWIFQWIIVLM 657
Score = 83.5 bits (176), Expect(3) = 2e-071
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -3 / -3
Query: 1816 INTMTRWRIQTPALLSDPSLKSCRMAPWGWPPRRRSCAASC 1694
INTM W+IQT ALLSDPS +SC+MAPWG PPRRR CAASC
Sbjct: 656 INTMIHWKIQTLALLSDPSSESCQMAPWG*PPRRRPCAASC 534
Score = 53.3 bits (110), Expect(3) = 2e-071
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = -3 / -3
Query: 1543 *AWPRAPPERLGTPCT**AP*A 1478
*AWPRAPPERLGTPCT**AP*A
Sbjct: 383 *AWPRAPPERLGTPCT**AP*A 318
Score = 50.1 bits (103), Expect(2) = 7e-028
Identities = 24/40 (60%), Positives = 24/40 (60%)
Frame = +2 / +3
Query: 1700 GCTXXXXXXXXXXXHPARF*GRI*EQSWRLDSPTGHRVDA 1819
GCT H ARF*GRI*EQS RLD P HRVDA
Sbjct: 540 GCTRSSSWRLSPRRHLARF*GRI*EQS*RLDFPMDHRVDA 659
Score = 42.8 bits (87), Expect(3) = 2e-068
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3 / +1
Query: 1479 AQGAHQVQGVPSRSGGA 1529
AQGAHQVQGVPSRSGGA
Sbjct: 319 AQGAHQVQGVPSRSGGA 369
>gb|CN129749.1|CN129749 RHOH1_37_E03.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_37_E03_A002 3', mRNA sequence
Length = 850
Score = 316 bits (684), Expect(3) = e-114
Identities = 126/158 (79%), Positives = 143/158 (90%)
Frame = +1 / +2
Query: 1105 PMGKELQDLLRAKLPRAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELK 1284
PMGK+++D AKLP AVLGQGYGMTEAGPVLSMC+AFAKEP VKSGACGTVVRNAELK
Sbjct: 155 PMGKDIEDAFMAKLPGAVLGQGYGMTEAGPVLSMCLAFAKEPFKVKSGACGTVVRNAELK 334
Query: 1285 IIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEI 1464
I+DP+TG SL RN PGEICIRG+Q+MKGYLNNP+AT +ID++GWLHTGD+G+VDD DEI
Sbjct: 335 IVDPDTGKSLARNLPGEICIRGQQIMKGYLNNPDATKNSIDADGWLHTGDVGFVDDDDEI 514
Query: 1465 FIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVV 1578
FIVDRLKE+IKYKG QVAPAE+EA+LI HPSI DAAVV
Sbjct: 515 FIVDRLKEIIKYKGLQVAPAEIEALLITHPSIADAAVV 628
Score = 237 bits (513), Expect(3) = 9e-077
Identities = 108/158 (68%), Positives = 113/158 (71%)
Frame = -2 / -2
Query: 1577 TTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMV 1398
TTAAS MLGW ATW PLY M SLS STMKISS SST P SPVCS PS SM+
Sbjct: 627 TTAASAMLGWVMSRASISAGATWRPLYFMISLSLSTMKISSSSSTKPTSPVCSQPSASML 448
Query: 1397 FAVASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLA 1218
F VASGL R PF+ C PLMQISPG R RD PVSGS I SSA TTVP APDFT GSLA
Sbjct: 447 FFVASGLFR*PFMICWPLMQISPGRFRARDLPVSGSTILSSALRTTVPHAPDFTLKGSLA 268
Query: 1217 NAMHIESTGPASVIP*PCPSTARGSLARSRSCSSLPMG 1104
NA H++STGPASV+P PCPSTA GSLA S S PMG
Sbjct: 267 NARHMDSTGPASVMPYPCPSTAPGSLAMKASSMSFPMG 154
Score = 149 bits (320), Expect(3) = 8e-041
Identities = 67/117 (57%), Positives = 81/117 (69%)
Frame = -1 / -1
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHR 1258
+V+GVQP + VD + R +RVV+V FH LLAPDA+L G V EG G+ VDDL LG+ HHR
Sbjct: 487 DVAGVQPTVSVDAILRRIRVVQVTFHDLLAPDADLSGEVPGEGLAGVGVDDLELGVAHHR 308
Query: 1257 AAGTGLHR*RLLGKRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAHGRGPRDD 1087
AA GLH LLG+R AH +HR L H + LSEHGA ELG + VL +L HGR R D
Sbjct: 307 AARAGLHLEGLLGERQAHGQHRPSLRHAVPLSEHGAGELGHEGVLDVLPHGRHERGD 137
Score = 104 bits (222), Expect = 4e-021
Identities = 48/87 (55%), Positives = 59/87 (67%)
Frame = +3 / +1
Query: 1164 TGLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLH 1343
TG+ D G GA+ V GV QGA+ GEVR +RHGG + RA+D RP R VP P+P R DLH
Sbjct: 214 TGVRHDGGWAGAVHVPGVRQGALQGEVRRVRHGGAQRRAQDRRPRHRQVPRPEPPRRDLH 393
Query: 1344 QGQAVDERVPQQPGGNGEDHRLGGVAA 1424
QG A ER+P+QPG + E HR +AA
Sbjct: 394 QGPADHERLPEQPGCDEE*HRR*RLAA 474
Score = 104 bits (222), Expect(2) = 3e-023
Identities = 48/81 (59%), Positives = 50/81 (61%)
Frame = +2 / +3
Query: 1088 SSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW* 1267
S R RPW R+ RT PSS APCSDR *+R RC CAWR PRS R*SP AARW
Sbjct: 138 SPRSCRPWGRTSRTPSWPSSPAPCSDRGTA*RRLGRCCPCAWRSPRSPSR*SPARAARWC 317
Query: 1268 GMPS*RSSTRRPGCPSTATSP 1330
PS RSST P PS TSP
Sbjct: 318 ATPSSRSSTPTPASPSPGTSP 380
Score = 100 bits (214), Expect = 6e-020
Identities = 48/89 (53%), Positives = 52/89 (58%)
Frame = -3 / -3
Query: 1429 RCAATPPSRWSSPLPPGC*GTLSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPPCRR 1250
RCAA R S PGC G LS +A P*C+S R G G GT R GR S AR +PPCR
Sbjct: 479 RCAANRQRRCYSSSHPGCSGNLS*SAGP*CRSLRGGSGRGTCRCRGRRS*ARRCAPPCRT 300
Query: 1249 HRTSPVTAPWQTPCTSRAPGLPLSSHNPV 1163
RTSP APW+TP T AP P S PV
Sbjct: 299 RRTSP*RAPWRTPGTWTAPAQPPSCRTPV 213
Score = 99.6 bits (211), Expect(3) = e-114
Identities = 38/72 (52%), Positives = 57/72 (79%)
Frame = +1 / +2
Query: 1567 AAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPS 1746
A V + + GEIPVAFV + GS ++ED++KQ+VAK+V++YK++ ++ F++ IPKAPS
Sbjct: 620 AVVGKQVEPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPS 799
Query: 1747 GKILRKDLRAKL 1782
GKILRK+LR +L
Sbjct: 800 GKILRKELRKQL 835
Score = 58.8 bits (122), Expect(3) = 9e-077
Identities = 33/73 (45%), Positives = 40/73 (54%)
Frame = -2 / -2
Query: 1772 LRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQE 1593
L S ILPDGALG+ S K + L* T AT CL SSS+ P T ATGISP
Sbjct: 825 LSSLRNILPDGALGILSMKITSRTFL**ITSLATNCLTSSSLSSLPLALATKATGISPIS 646
Query: 1592 SSFIWTTAASTML 1554
S + T A++ +
Sbjct: 645 GSTCFPTTAASAM 607
Score = 47.3 bits (97), Expect(3) = e-114
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1 / +2
Query: 730 LPYSSGTTGLPKGVMLSHR 786
LPYSSGTTGLPKGVML+HR
Sbjct: 74 LPYSSGTTGLPKGVMLTHR 130
Score = 39.6 bits (80), Expect(3) = 9e-077
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -2 / -2
Query: 785 RCDSITPLGSPVVPDEYG 732
RC SITPLGSPVVPDE G
Sbjct: 129 RCVSITPLGSPVVPDE*G 76
Score = 34.5 bits (69), Expect(3) = 8e-041
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -1 / -1
Query: 1752 LAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDLA 1600
LA W LGD ++E+ LV HL H L D++ G + RD +
Sbjct: 805 LARWGLGDLVNEDHFTDLLVVDHLLGHKLFDVIFTKLAPFGLGHKGDRDFS 653
Score = 31.3 bits (62), Expect(3) = 8e-041
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1 / -1
Query: 783 VRQHHPLGQPRRA 745
VRQHH LG+PRRA
Sbjct: 127 VRQHHALGEPRRA 89
Score = 30.9 bits (61), Expect(2) = 3e-023
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3 / +1
Query: 1662 QAVRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKA 1781
Q + G+ G +LQE L PQG I QD +G++ A
Sbjct: 715 QTICGQGGDLLQEGP*SDLH*QDPQGPIGQDIAQGAKEAA 834
>gb|CW077966.1|CW077966 104_386_10894698_116_31912_378 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894698, DNA
sequence
Length = 739
Score = 265 bits (573), Expect(2) = e-111
Identities = 112/119 (94%), Positives = 116/119 (97%)
Frame = +1 / +3
Query: 1012 LVLPIAVEMVKSDAIDRHDLSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEAG 1191
LVLPIAVEM KSDA+DRHDLSSVRMVISGAAPMG+ELQDLLRAKLP AVLGQGYGMTEAG
Sbjct: 3 LVLPIAVEMAKSDAMDRHDLSSVRMVISGAAPMGRELQDLLRAKLPGAVLGQGYGMTEAG 182
Query: 1192 PVLSMCMAFAKEPLPVKSGACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKG 1368
PVLSMCMAFAKEPLPVKSGACGTVVRNAELKI+DP+TGLSL RNQPGEICIRGKQLMKG
Sbjct: 183 PVLSMCMAFAKEPLPVKSGACGTVVRNAELKIVDPDTGLSLRRNQPGEICIRGKQLMKG 359
Score = 261 bits (565), Expect(2) = e-101
Identities = 111/119 (93%), Positives = 112/119 (94%)
Frame = -2 / -1
Query: 1367 PFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLANAMHIESTGP 1188
PFINCLPLMQISPGWLR RDSPVSGS I SSAFLTTVPQAPDFTGNGS ANAMHIESTGP
Sbjct: 358 PFINCLPLMQISPGWLRRRDSPVSGSTILSSAFLTTVPQAPDFTGNGSFANAMHIESTGP 179
Query: 1187 ASVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMRTDERSWRSMASLLTISTAMGSTS 1011
ASVIP PCPSTA GSLARSRSCSSLPMGAAPEMTMRT+ERSWRSMASLL ISTAMGSTS
Sbjct: 178 ASVIPYPCPSTAPGSLARSRSCSSLPMGAAPEMTMRTEERSWRSMASLLAISTAMGSTS 2
Score = 243 bits (525), Expect(2) = 2e-071
Identities = 102/129 (79%), Positives = 108/129 (83%)
Frame = -1 / -3
Query: 1398 LRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHRAAGTGLHR*RLLG 1219
+R+ R V FHQLLAPDANLPGLVA EGQPG+RVDDL LG+PHHRAAG GLHR RLL
Sbjct: 389 VRKKSRRVLRTFHQLLAPDANLPGLVAAEGQPGVRVDDLELGVPHHRAAGAGLHRQRLLC 210
Query: 1218 KRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGVALD 1039
KRHAH EH +CLCHP+ L EHGA ELGAQQVLQL AHGRGPRDDHAHR EVVAV GVAL
Sbjct: 209 KRHAH*EHGSCLCHPVPLPEHGAGELGAQQVLQLPAHGRGPRDDHAHRGEVVAVHGVALG 30
Query: 1038 HLHRDGQHE 1012
HLH DGQHE
Sbjct: 29 HLHGDGQHE 3
Score = 165 bits (355), Expect(4) = 2e-053
Identities = 67/82 (81%), Positives = 68/82 (82%)
Frame = +2 / +1
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW 1264
WSSRGPRPWA SCRTCCAPSS APCS R G*QRQ CS+CAWRL RSR R*SP PAARW
Sbjct: 76 WSSRGPRPWAGSCRTCCAPSSPAPCSGRGTG*QRQDPCSQCAWRLQRSRCR*SPAPAARW 255
Query: 1265 *GMPS*RSSTRRPGCPSTATSP 1330
*G PS RSSTR PGCPS ATSP
Sbjct: 256 *GTPSSRSSTRTPGCPSAATSP 321
Score = 164 bits (352), Expect(2) = e-111
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +1 / +1
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLI 1545
GYLNNPEATAKTID EGWLHTGDIGYVDD DEIFIVDRLKELIKYKGFQVAPAELEAMLI
Sbjct: 484 GYLNNPEATAKTIDDEGWLHTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLI 663
Query: 1546 AHPSIVDAAVV 1578
AHPSI DAAVV
Sbjct: 664 AHPSIADAAVV 696
Score = 135 bits (289), Expect = 3e-030
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +3 / +2
Query: 1167 GLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQ 1346
G+ DDRGR AL+VHGVC+GAV GEVR LRHGGEE RA+D RPG RAVPPPQPARGDLHQ
Sbjct: 158 GVRDDRGRTRALNVHGVCKGAVAGEVRRLRHGGEERRAQDRRPGHRAVPPPQPARGDLHQ 337
Query: 1347 GQAVDER 1367
GQAVDER
Sbjct: 338 GQAVDER 358
Score = 133 bits (285), Expect(2) = e-101
Identities = 57/71 (80%), Positives = 57/71 (80%)
Frame = -2 / -3
Query: 1577 TTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMV 1398
TTAAS MLGW ATWNPLYLMSSLS STMKISS SSTYPMSPVCSHPS SMV
Sbjct: 695 TTAASAMLGWAMSMASSSAGATWNPLYLMSSLSLSTMKISSSSSTYPMSPVCSHPSSSMV 516
Query: 1397 FAVASGLLRYP 1365
FAVASGLLRYP
Sbjct: 515 FAVASGLLRYP 483
Score = 131 bits (280), Expect(3) = 5e-040
Identities = 55/67 (82%), Positives = 55/67 (82%)
Frame = -3 / -2
Query: 1366 LSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAPGL 1187
LSSTACP*CKSPRAGCGGGTAR PGR S AR SSPPCRR RTSP TAP QTPCT RA L
Sbjct: 357 LSSTACP*CKSPRAGCGGGTARCPGRRS*ARRSSPPCRRRRTSPATAPLQTPCTLRARVL 178
Query: 1186 PLSSHNP 1166
PLSS P
Sbjct: 177 PLSSRTP 157
Score = 57.0 bits (118), Expect(3) = 5e-040
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -3 / -1
Query: 1441 TQCLRCAATPPSRWSSPLPPGC*GTL 1364
TQCLRCAAT RWSSP PPGC*GTL
Sbjct: 559 TQCLRCAATLHRRWSSPWPPGC*GTL 482
Score = 53.3 bits (110), Expect(2) = 2e-071
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = -3 / -1
Query: 1543 *AWPRAPPERLGTPCT**AP*A 1478
*AWPRAPPERLGTPCT**AP*A
Sbjct: 661 *AWPRAPPERLGTPCT**AP*A 596
Score = 48.7 bits (100), Expect = 3e-004
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -1 / -2
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVP 1366
NVSGVQPP VDGLRR LRVVEVP
Sbjct: 555 NVSGVQPPFIVDGLRRGLRVVEVP 484
Score = 42.8 bits (87), Expect(4) = 2e-053
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3 / +3
Query: 1479 AQGAHQVQGVPSRSGGA 1529
AQGAHQVQGVPSRSGGA
Sbjct: 597 AQGAHQVQGVPSRSGGA 647
Score = 39.6 bits (80), Expect(4) = 2e-053
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +3 / +3
Query: 1365 RVPQQPGGNGEDHRLGGVAA 1424
RVPQQPGG+GEDHR VAA
Sbjct: 483 RVPQQPGGHGEDHRR*RVAA 542
Score = 29.0 bits (57), Expect(4) = 2e-053
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +2
Query: 1041 QERRHRPPRPLV 1076
QERRH PPRPL+
Sbjct: 32 QERRHGPPRPLL 67
Score = 24.0 bits (46), Expect(3) = 5e-040
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -2
Query: 1542 EHGLELRRS 1516
EHGLELRRS
Sbjct: 660 EHGLELRRS 634
>gb|CW273595.1|CW273595 104_746_11403983_148_35368_094 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403983, DNA
sequence
Length = 523
Score = 385 bits (836), Expect = e-106
Identities = 163/172 (94%), Positives = 168/172 (97%)
Frame = +1 / -3
Query: 853 DVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAV 1032
DVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGIT+VPLVLPIAV
Sbjct: 521 DVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITVVPLVLPIAV 342
Query: 1033 EMVKSDAIDRHDLSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEAGPVLSMCM 1212
EM KSDA+DRHDLSSVRMVISGAAPMG+ELQDLLRAKLP AVLGQGYGMTEAGPVLSMCM
Sbjct: 341 EMAKSDAMDRHDLSSVRMVISGAAPMGRELQDLLRAKLPGAVLGQGYGMTEAGPVLSMCM 162
Query: 1213 AFAKEPLPVKSGACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKG 1368
AFAKEP PVKSGACGTVVRNAELKI+DP+TGLSL RNQPGEICIRGKQLMKG
Sbjct: 161 AFAKEP*PVKSGACGTVVRNAELKIVDPDTGLSLRRNQPGEICIRGKQLMKG 6
Score = 367 bits (796), Expect = e-100
Identities = 156/172 (90%), Positives = 159/172 (92%)
Frame = -2 / +1
Query: 1367 PFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLANAMHIESTGP 1188
PFINCLPLMQISPGWLR RDSPVSGS I SSAFLTTVPQAPDFTG GS ANAMHIESTGP
Sbjct: 7 PFINCLPLMQISPGWLRRRDSPVSGSTILSSAFLTTVPQAPDFTGYGSFANAMHIESTGP 186
Query: 1187 ASVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMRTDERSWRSMASLLTISTAMGSTSG 1008
ASVIP PCPSTA GSLARS+SCSSLPMGAAPEMTMRT+ERSWRSMASLL ISTAMGSTSG
Sbjct: 187 ASVIPYPCPSTAPGSLARSKSCSSLPMGAAPEMTMRTEERSWRSMASLLAISTAMGSTSG 366
Query: 1007 TIVMPCLFTSSNMRRVSKRFMITSAAPARIPHSRMECSEYTWNMGSTQRTTS 852
T VMPC FTSSNMR VSKRFM+TSAAPARIPHSRMECSE TWNMGSTQ TTS
Sbjct: 367 TTVMPCRFTSSNMRSVSKRFMMTSAAPARIPHSRMECSE*TWNMGSTQSTTS 522
Score = 345 bits (747), Expect = 2e-093
Identities = 142/166 (85%), Positives = 146/166 (87%)
Frame = -1 / +3
Query: 1365 FHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHRAAGTGLHR*RLLGKRHAHREHRAC 1186
FHQLLAPDANLPGLVA EGQPG+RVDDL LG+PHHRAAG GLHR RLL KRHAH EH +C
Sbjct: 9 FHQLLAPDANLPGLVAAEGQPGVRVDDLELGVPHHRAAGAGLHRLRLLCKRHAH*EHGSC 188
Query: 1185 LCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGVALDHLHRDGQHERH 1006
LCHP+ L EHGA ELGAQQVLQL AHGRGPRDDHAHR EVVAV GVAL HLH DGQHER
Sbjct: 189 LCHPVPLPEHGAGELGAQQVLQLPAHGRGPRDDHAHRGEVVAVHGVALGHLHGDGQHERD 368
Query: 1005 DRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHGQH 868
D DAVPLHQLEHAE VEALHD ERRAGAHPAQQDGVQRV VEHGQH
Sbjct: 369 DGDAVPLHQLEHAERVEALHDDERRAGAHPAQQDGVQRVDVEHGQH 506
Score = 165 bits (355), Expect(3) = 2e-052
Identities = 67/82 (81%), Positives = 68/82 (82%)
Frame = +2 / -1
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW 1264
WSSRGPRPWA SCRTCCAPSS APCS R G*QRQ CS+CAWRL RSR R*SP PAARW
Sbjct: 289 WSSRGPRPWAGSCRTCCAPSSPAPCSGRGTG*QRQDPCSQCAWRLQRSRSR*SPAPAARW 110
Query: 1265 *GMPS*RSSTRRPGCPSTATSP 1330
*G PS RSSTR PGCPS ATSP
Sbjct: 109 *GTPSSRSSTRTPGCPSAATSP 44
Score = 135 bits (289), Expect = 3e-030
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +3 / -2
Query: 1167 GLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQ 1346
G+ DDRGR AL+VHGVC+GAV GEVR LRHGGEE RA+D RPG RAVPPPQPARGDLHQ
Sbjct: 207 GVRDDRGRTRALNVHGVCKGAVAGEVRRLRHGGEERRAQDRRPGHRAVPPPQPARGDLHQ 28
Query: 1347 GQAVDER 1367
GQAVDER
Sbjct: 27 GQAVDER 7
Score = 131 bits (280), Expect = 4e-029
Identities = 55/67 (82%), Positives = 55/67 (82%)
Frame = -3 / +2
Query: 1366 LSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAPGL 1187
LSSTACP*CKSPRAGCGGGTAR PGR S AR SSPPCRR RTSP TAP QTPCT RA L
Sbjct: 8 LSSTACP*CKSPRAGCGGGTARCPGRRS*ARRSSPPCRRRRTSPATAPLQTPCTLRARVL 187
Query: 1186 PLSSHNP 1166
PLSS P
Sbjct: 188 PLSSRTP 208
Score = 53.3 bits (110), Expect(3) = 2e-052
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = +3 / -2
Query: 876 HVPRVLAALHPAVXXXXXXXXXXHEALRHSPHV 974
HVPR+LAALHPAV HEALRH+PHV
Sbjct: 498 HVPRLLAALHPAVRDARRRGARHHEALRHAPHV 400
Score = 29.0 bits (57), Expect(3) = 2e-052
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / -2
Query: 1041 QERRHRPPRPLV 1076
QERRH PPRPL+
Sbjct: 333 QERRHGPPRPLL 298
>gb|CN145355.1|CN145355 WOUND1_28_A03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_28_A03_A002 5', mRNA sequence
Length = 682
Score = 269 bits (581), Expect(2) = e-101
Identities = 108/143 (75%), Positives = 126/143 (88%)
Frame = +1 / +3
Query: 1276 ELKIIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDG 1455
ELKI+DP+T SL RNQPGEICIRG+Q+MKGYLN+PEAT TID +GWLHTGDIGYVDD
Sbjct: 252 ELKIVDPDTSESLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDD 431
Query: 1456 DEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASG 1635
DEIFIVDRLKE+IKYKGFQV PAE+EA+LI HP I DAAVV MKD+ GE+PVAF++ S
Sbjct: 432 DEIFIVDRLKEIIKYKGFQVPPAEVEALLITHPEIRDAAVVSMKDELAGEVPVAFIIQSE 611
Query: 1636 GSGITEDEIKQYVAKQVVFYKRL 1704
GS I+E+EIKQ+VAK+VVFYKR+
Sbjct: 612 GSEISENEIKQFVAKEVVFYKRI 680
Score = 185 bits (399), Expect(2) = 5e-064
Identities = 90/142 (63%), Positives = 94/142 (66%)
Frame = -2 / -1
Query: 1700 LL*NTTCFATYCLISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXX 1521
LL*NTT FAT CLIS S+I EP NATG SP SSFI TTAAS + G
Sbjct: 676 LL*NTTSFATNCLISFSLISEPSLCIMNATGTSPASSSFIETTAASLISGCVMRRASTSA 497
Query: 1520 XATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLM 1341
TW PLYL+ SLS STM ISS SST PMSPVCSHPS SMVF VASG R PF+ C P M
Sbjct: 496 GGTWKPLYLIISLSLSTMNISSSSST*PMSPVCSHPSLSMVFFVASGSFR*PFMICSPRM 317
Query: 1340 QISPGWLRWRDSPVSGSMIFSS 1275
ISPGW R DS VSGS I SS
Sbjct: 316 HISPGWFRPSDSLVSGSTILSS 251
Score = 126 bits (270), Expect(2) = e-101
Identities = 47/75 (62%), Positives = 62/75 (82%)
Frame = +1 / +3
Query: 814 VDGDNPNLHFREDDVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRH 993
VDG+NPNLHF DDVVLCVLP+FH+YSL+S+LL G+RAG A+VIM++F+ + ELV+ H
Sbjct: 33 VDGENPNLHFSSDDVVLCVLPLFHIYSLNSVLLAGLRAGCAIVIMRKFEIGALVELVRAH 212
Query: 994 GITIVPLVLPIAVEM 1038
G+T+ P V PI VE+
Sbjct: 213 GVTVAPFVPPIVVEL 257
Score = 85.8 bits (181), Expect(2) = 5e-064
Identities = 42/79 (53%), Positives = 44/79 (55%)
Frame = -2 / -1
Query: 1049 SLLTISTAMGSTSGTIVMPCLFTSSNMRRVSKRFMITSAAPARIPHSRMECSEYTWNMGS 870
S + ST MG T G V PC TSS +S MIT A PAR P E SE WN GS
Sbjct: 268 STILSSTTMGGTKGATVTPCARTSSTSAPISNLRMITMAHPARSPARSTELSE*MWNSGS 89
Query: 869 TQRTTSSSRKWRFGLSPST 813
T TTSS K RFG SPST
Sbjct: 88 THSTTSSLLKCRFGFSPST 32
Score = 62.5 bits (130), Expect(4) = 4e-022
Identities = 26/56 (46%), Positives = 31/56 (55%)
Frame = -1 / -3
Query: 1035 LHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHGQH 868
LH DG+HE AV HQL +E HDH+ GA P Q+ V+RV VE QH
Sbjct: 254 LHHDGRHEGRHGHAVRAHQLHQRADLELAHDHDGAPGAQPRQEHRVERVDVEQRQH 87
Score = 45.1 bits (92), Expect(4) = 4e-022
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = -1 / -3
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL 1282
NV VQP + ++G+ ++++ FH L A DA L LV+ + G+ VDDL
Sbjct: 413 NVPSVQPSILINGVLCRFWIIQITFHDLFAADAYLAWLVSSQRLAGVWVDDL 258
Score = 35.9 bits (72), Expect(4) = 4e-022
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -1 / -3
Query: 1701 PLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDLAAGVILH 1582
PLVEH L + L DLVL + A ++E +RD A+ I H
Sbjct: 677 PLVEHDLLCNKLFDLVLTNLRAFTLYNECNRDFASKFIFH 558
Score = 33.1 bits (66), Expect(3) = 0.028
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3 / +2
Query: 1278 AKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQQPGGNGEDHRLGGVAA 1424
A+D RP + V +PAR D+H + ER+ + + E H G +AA
Sbjct: 254 AQDRRPRHQRVAGTKPARRDMHPRRTNHERLSE*SRSDKEHH**GWMAA 400
Score = 26.7 bits (52), Expect(3) = 0.028
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3 / +2
Query: 1479 AQGAHQVQGVPSRSGGA 1529
AQG +Q+QG+PS S G+
Sbjct: 455 AQGDNQIQGLPSTSCGS 505
Score = 26.3 bits (51), Expect(4) = 4e-022
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3 / -2
Query: 1534 PRAPPERLGTPCT**AP*A 1478
P+ P E LG+PC * +P*A
Sbjct: 510 PQLPQEVLGSPCI*LSP*A 454
Score = 22.1 bits (42), Expect(3) = 0.028
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +2 / +1
Query: 1085 WSSRGPRPWARSCR 1126
W +R PW SCR
Sbjct: 199 WCARTA*PWRPSCR 240
>gb|CW128047.1|CW128047 104_509_11113781_148_34748_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113781, DNA
sequence
Length = 628
Score = 365 bits (791), Expect = 1e-099
Identities = 154/162 (95%), Positives = 159/162 (98%)
Frame = +1 / +3
Query: 883 HVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAVEMVKSDAIDR 1062
HVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGIT+VPLVLPIAVEM KSDA+DR
Sbjct: 3 HVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITVVPLVLPIAVEMAKSDAMDR 182
Query: 1063 HDLSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEAGPVLSMCMAFAKEPLPVK 1242
HDLSSVRMVISGAAPMG+ELQDLLRAKLP AVLGQGYGMTEAGPVLSMCMAFAKEPLPVK
Sbjct: 183 HDLSSVRMVISGAAPMGRELQDLLRAKLPGAVLGQGYGMTEAGPVLSMCMAFAKEPLPVK 362
Query: 1243 SGACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKG 1368
SGACGTVVRNAELKI+DP+TGLSL RNQPGEICIRGKQLMKG
Sbjct: 363 SGACGTVVRNAELKIVDPDTGLSLRRNQPGEICIRGKQLMKG 488
Score = 352 bits (763), Expect = 1e-095
Identities = 149/162 (91%), Positives = 151/162 (93%)
Frame = -2 / -1
Query: 1367 PFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLANAMHIESTGP 1188
PFINCLPLMQISPGWLR RDSPVSGS I SSAFLTTVPQAPDFTGNGS ANAMHIESTGP
Sbjct: 487 PFINCLPLMQISPGWLRRRDSPVSGSTILSSAFLTTVPQAPDFTGNGSFANAMHIESTGP 308
Query: 1187 ASVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMRTDERSWRSMASLLTISTAMGSTSG 1008
ASVIP PCPSTA GSLARSRSCSSLPMGAAPEMTMRT+ERSWRSMASLL ISTAMGSTSG
Sbjct: 307 ASVIPYPCPSTAPGSLARSRSCSSLPMGAAPEMTMRTEERSWRSMASLLAISTAMGSTSG 128
Query: 1007 TIVMPCLFTSSNMRRVSKRFMITSAAPARIPHSRMECSEYTW 882
T VMPC FTSSNMR VSKRFM+TSAAPARIPHSRMECSE TW
Sbjct: 127 TTVMPCRFTSSNMRSVSKRFMMTSAAPARIPHSRMECSE*TW 2
Score = 331 bits (717), Expect = 2e-089
Identities = 140/172 (81%), Positives = 146/172 (84%)
Frame = -1 / -3
Query: 1398 LRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHRAAGTGLHR*RLLG 1219
+R+ R V FHQLLAPDANLPGLVA EGQPG+RVDDL LG+PHHRAAG GLHR RLL
Sbjct: 518 VRKKSRRVLRTFHQLLAPDANLPGLVAAEGQPGVRVDDLELGVPHHRAAGAGLHRQRLLC 339
Query: 1218 KRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGVALD 1039
KRHAH EH +CLCHP+ L EHGA ELGAQQVLQL AHGRGPRDDHAHR EVVAV GVAL
Sbjct: 338 KRHAH*EHGSCLCHPVPLPEHGAGELGAQQVLQLPAHGRGPRDDHAHRGEVVAVHGVALG 159
Query: 1038 HLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHV 883
HLH DGQHER D DAVPLHQLEHAE VEALHD ERRAGAHPAQQDGVQRV V
Sbjct: 158 HLHGDGQHERDDGDAVPLHQLEHAERVEALHDDERRAGAHPAQQDGVQRVDV 3
Score = 165 bits (355), Expect(3) = 7e-051
Identities = 67/82 (81%), Positives = 68/82 (82%)
Frame = +2 / +1
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW 1264
WSSRGPRPWA SCRTCCAPSS APCS R G*QRQ CS+CAWRL RSR R*SP PAARW
Sbjct: 205 WSSRGPRPWAGSCRTCCAPSSPAPCSGRGTG*QRQDPCSQCAWRLQRSRCR*SPAPAARW 384
Query: 1265 *GMPS*RSSTRRPGCPSTATSP 1330
*G PS RSSTR PGCPS ATSP
Sbjct: 385 *GTPSSRSSTRTPGCPSAATSP 450
Score = 135 bits (289), Expect = 3e-030
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +3 / +2
Query: 1167 GLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQ 1346
G+ DDRGR AL+VHGVC+GAV GEVR LRHGGEE RA+D RPG RAVPPPQPARGDLHQ
Sbjct: 287 GVRDDRGRTRALNVHGVCKGAVAGEVRRLRHGGEERRAQDRRPGHRAVPPPQPARGDLHQ 466
Query: 1347 GQAVDER 1367
GQAVDER
Sbjct: 467 GQAVDER 487
Score = 131 bits (280), Expect = 4e-029
Identities = 55/67 (82%), Positives = 55/67 (82%)
Frame = -3 / -2
Query: 1366 LSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAPGL 1187
LSSTACP*CKSPRAGCGGGTAR PGR S AR SSPPCRR RTSP TAP QTPCT RA L
Sbjct: 486 LSSTACP*CKSPRAGCGGGTARCPGRRS*ARRSSPPCRRRRTSPATAPLQTPCTLRARVL 307
Query: 1186 PLSSHNP 1166
PLSS P
Sbjct: 306 PLSSRTP 286
Score = 47.8 bits (98), Expect(3) = 7e-051
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +3 / +2
Query: 882 PRVLAALHPAVXXXXXXXXXXHEALRHSPHV 974
PR+LAALHPAV HEALRH+PHV
Sbjct: 2 PRLLAALHPAVRDARRRGARHHEALRHAPHV 94
Score = 29.0 bits (57), Expect(3) = 7e-051
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +2
Query: 1041 QERRHRPPRPLV 1076
QERRH PPRPL+
Sbjct: 161 QERRHGPPRPLL 196
>gb|CW071495.1|CW071495 104_323_10591543_114_30471 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591543, DNA
sequence
Length = 740
Score = 222 bits (479), Expect(2) = 2e-098
Identities = 93/98 (94%), Positives = 96/98 (97%)
Frame = +1 / +2
Query: 1075 SVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGAC 1254
SVRMVISGAAPMG+ELQDLLRAKLP AVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGAC
Sbjct: 2 SVRMVISGAAPMGRELQDLLRAKLPGAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGAC 181
Query: 1255 GTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKG 1368
GTVVRNAELKI+DP+TGLSL RNQPGEICIRGKQLMKG
Sbjct: 182 GTVVRNAELKIVDPDTGLSLRRNQPGEICIRGKQLMKG 295
Score = 217 bits (469), Expect(2) = 8e-088
Identities = 91/98 (92%), Positives = 92/98 (93%)
Frame = -2 / -3
Query: 1367 PFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLANAMHIESTGP 1188
PFINCLPLMQISPGWLR RDSPVSGS I SSAFLTTVPQAPDFTGNGS ANAMHIESTGP
Sbjct: 294 PFINCLPLMQISPGWLRRRDSPVSGSTILSSAFLTTVPQAPDFTGNGSFANAMHIESTGP 115
Query: 1187 ASVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMRTD 1074
ASVIP PCPSTA GSLARSRSCSSLPMGAAPEMTMRT+
Sbjct: 114 ASVIPYPCPSTAPGSLARSRSCSSLPMGAAPEMTMRTE 1
Score = 205 bits (442), Expect(2) = 4e-060
Identities = 85/108 (78%), Positives = 91/108 (84%)
Frame = -1 / -2
Query: 1398 LRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHRAAGTGLHR*RLLG 1219
+R+ R V FHQLLAPDANLPGLVA EGQPG+RVDDL LG+PHHRAAG GLHR RLL
Sbjct: 325 VRKKSRRVLRTFHQLLAPDANLPGLVAAEGQPGVRVDDLELGVPHHRAAGAGLHRQRLLC 146
Query: 1218 KRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHAHR 1075
KRHAH EH +CLCHP+ L EHGA ELGAQQVLQL AHGRGPRDDHAHR
Sbjct: 145 KRHAH*EHGSCLCHPVPLPEHGAGELGAQQVLQLPAHGRGPRDDHAHR 2
Score = 165 bits (355), Expect(3) = 1e-050
Identities = 67/82 (81%), Positives = 68/82 (82%)
Frame = +2 / +3
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW 1264
WSSRGPRPWA SCRTCCAPSS APCS R G*QRQ CS+CAWRL RSR R*SP PAARW
Sbjct: 12 WSSRGPRPWAGSCRTCCAPSSPAPCSGRGTG*QRQDPCSQCAWRLQRSRCR*SPAPAARW 191
Query: 1265 *GMPS*RSSTRRPGCPSTATSP 1330
*G PS RSSTR PGCPS ATSP
Sbjct: 192 *GTPSSRSSTRTPGCPSAATSP 257
Score = 164 bits (352), Expect(2) = 2e-098
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +1 / +3
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLI 1545
GYLNNPEATAKTID EGWLHTGDIGYVDD DEIFIVDRLKELIKYKGFQVAPAELEAMLI
Sbjct: 420 GYLNNPEATAKTIDDEGWLHTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLI 599
Query: 1546 AHPSIVDAAVV 1578
AHPSI DAAVV
Sbjct: 600 AHPSIADAAVV 632
Score = 135 bits (289), Expect = 3e-030
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +3 / +1
Query: 1167 GLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQ 1346
G+ DDRGR AL+VHGVC+GAV GEVR LRHGGEE RA+D RPG RAVPPPQPARGDLHQ
Sbjct: 94 GVRDDRGRTRALNVHGVCKGAVAGEVRRLRHGGEERRAQDRRPGHRAVPPPQPARGDLHQ 273
Query: 1347 GQAVDER 1367
GQAVDER
Sbjct: 274 GQAVDER 294
Score = 133 bits (285), Expect(2) = 8e-088
Identities = 57/71 (80%), Positives = 57/71 (80%)
Frame = -2 / -2
Query: 1577 TTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMV 1398
TTAAS MLGW ATWNPLYLMSSLS STMKISS SSTYPMSPVCSHPS SMV
Sbjct: 631 TTAASAMLGWAMSMASSSAGATWNPLYLMSSLSLSTMKISSSSSTYPMSPVCSHPSSSMV 452
Query: 1397 FAVASGLLRYP 1365
FAVASGLLRYP
Sbjct: 451 FAVASGLLRYP 419
Score = 131 bits (280), Expect(3) = 5e-040
Identities = 55/67 (82%), Positives = 55/67 (82%)
Frame = -3 / -1
Query: 1366 LSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAPGL 1187
LSSTACP*CKSPRAGCGGGTAR PGR S AR SSPPCRR RTSP TAP QTPCT RA L
Sbjct: 293 LSSTACP*CKSPRAGCGGGTARCPGRRS*ARRSSPPCRRRRTSPATAPLQTPCTLRARVL 114
Query: 1186 PLSSHNP 1166
PLSS P
Sbjct: 113 PLSSRTP 93
Score = 57.0 bits (118), Expect(3) = 5e-040
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -3 / -3
Query: 1441 TQCLRCAATPPSRWSSPLPPGC*GTL 1364
TQCLRCAAT RWSSP PPGC*GTL
Sbjct: 495 TQCLRCAATLHRRWSSPWPPGC*GTL 418
Score = 53.3 bits (110), Expect(2) = 4e-060
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = -3 / -3
Query: 1543 *AWPRAPPERLGTPCT**AP*A 1478
*AWPRAPPERLGTPCT**AP*A
Sbjct: 597 *AWPRAPPERLGTPCT**AP*A 532
Score = 48.7 bits (100), Expect = 3e-004
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -1 / -1
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVP 1366
NVSGVQPP VDGLRR LRVVEVP
Sbjct: 491 NVSGVQPPFIVDGLRRGLRVVEVP 420
Score = 42.8 bits (87), Expect(3) = 1e-050
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3 / +2
Query: 1479 AQGAHQVQGVPSRSGGA 1529
AQGAHQVQGVPSRSGGA
Sbjct: 533 AQGAHQVQGVPSRSGGA 583
Score = 39.6 bits (80), Expect(3) = 1e-050
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +3 / +2
Query: 1365 RVPQQPGGNGEDHRLGGVAA 1424
RVPQQPGG+GEDHR VAA
Sbjct: 419 RVPQQPGGHGEDHRR*RVAA 478
Score = 24.0 bits (46), Expect(3) = 5e-040
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 1542 EHGLELRRS 1516
EHGLELRRS
Sbjct: 596 EHGLELRRS 570
>gb|BE597274.1|BE597274 PI1_70_C05.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 644
Score = 293 bits (635), Expect(2) = 1e-094
Identities = 117/144 (81%), Positives = 132/144 (91%)
Frame = +1 / +3
Query: 1147 PRAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIIDPETGLSLHRNQ 1326
P AVLGQGYGMTEAGPVLSMC+AFAKEP VKSGACGTVVRNAELKI+DP+TG SL RN
Sbjct: 3 PGAVLGQGYGMTEAGPVLSMCLAFAKEPFKVKSGACGTVVRNAELKIVDPDTGKSLARNL 182
Query: 1327 PGEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKG 1506
PGEICIRG+Q+MKGYLNNP+AT +ID++GWLHTGD+G+VDD DEIFIVDRLKE+IKYKG
Sbjct: 183 PGEICIRGQQIMKGYLNNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKG 362
Query: 1507 FQVAPAELEAMLIAHPSIVDAAVV 1578
QVAPAE+EA+LI HPSI DA+VV
Sbjct: 363 LQVAPAEIEALLITHPSIADASVV 434
Score = 220 bits (474), Expect(2) = 4e-063
Identities = 99/144 (68%), Positives = 104/144 (72%)
Frame = -2 / -2
Query: 1577 TTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMV 1398
TT AS MLGW ATW PLY M SLS STMKISS SST P SPVCS PS SM+
Sbjct: 433 TTEASAMLGWVMSRASISAGATWRPLYFMISLSLSTMKISSSSSTKPTSPVCSQPSASML 254
Query: 1397 FAVASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLA 1218
F VASGL R PF+ C PLMQISPG R RD PVSGS I SSA TTVP APDFT GSLA
Sbjct: 253 FFVASGLFR*PFMICWPLMQISPGRFRARDLPVSGSTILSSALRTTVPHAPDFTLKGSLA 74
Query: 1217 NAMHIESTGPASVIP*PCPSTARG 1146
NA H++STGPASV+P PCPSTA G
Sbjct: 73 NARHMDSTGPASVMPYPCPSTAPG 2
Score = 127 bits (271), Expect = 8e-028
Identities = 56/96 (58%), Positives = 68/96 (70%)
Frame = -1 / -1
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHR 1258
+V+GVQP + VD + R +RVV+V FH LLAPDA+L G V EG G+ VDDL LG+ HHR
Sbjct: 293 DVAGVQPTVSVDAILRRIRVVQVTFHDLLAPDADLSGEVPGEGLAGVGVDDLELGVAHHR 114
Query: 1257 AAGTGLHR*RLLGKRHAHREHRACLCHPITLSEHGA 1150
AA GLH LLG+R AH +HR L H + LSEHGA
Sbjct: 113 AARAGLHLEGLLGERQAHGQHRPSLRHAVPLSEHGA 6
Score = 104 bits (222), Expect = 4e-021
Identities = 48/87 (55%), Positives = 59/87 (67%)
Frame = +3 / +2
Query: 1164 TGLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLH 1343
TG+ D G GA+ V GV QGA+ GEVR +RHGG + RA+D RP R VP P+P R DLH
Sbjct: 20 TGVRHDGGWAGAVHVPGVRQGALQGEVRRVRHGGAQRRAQDRRPRHRQVPRPEPPRRDLH 199
Query: 1344 QGQAVDERVPQQPGGNGEDHRLGGVAA 1424
QG A ER+P+QPG + E HR +AA
Sbjct: 200 QGPADHERLPEQPGCDEE*HRR*RLAA 280
Score = 100 bits (214), Expect = 6e-020
Identities = 48/89 (53%), Positives = 52/89 (58%)
Frame = -3 / -3
Query: 1429 RCAATPPSRWSSPLPPGC*GTLSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPPCRR 1250
RCAA R S PGC G LS +A P*C+S R G G GT R GR S AR +PPCR
Sbjct: 285 RCAANRQRRCYSSSHPGCSGNLS*SAGP*CRSLRGGSGRGTCRCRGRRS*ARRCAPPCRT 106
Query: 1249 HRTSPVTAPWQTPCTSRAPGLPLSSHNPV 1163
RTSP APW+TP T AP P S PV
Sbjct: 105 RRTSP*RAPWRTPGTWTAPAQPPSCRTPV 19
Score = 83.1 bits (175), Expect = 1e-014
Identities = 38/62 (61%), Positives = 39/62 (62%)
Frame = +2 / +1
Query: 1145 SLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW*GMPS*RSSTRRPGCPSTAT 1324
S APCSDR *+R RC CAWR PRS R*SP AARW PS RSST P PS T
Sbjct: 1 SPAPCSDRGTA*RRLGRCCPCAWRSPRSPSR*SPARAARWCATPSSRSSTPTPASPSPGT 180
Query: 1325 SP 1330
SP
Sbjct: 181 SP 186
Score = 76.7 bits (161), Expect(2) = 1e-094
Identities = 27/62 (43%), Positives = 46/62 (74%)
Frame = +1 / +3
Query: 1567 AAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPS 1746
+ V + + GEIPVAFV + GS ++ED++KQ+VAK+V++YK++ ++ F++ IPKAP
Sbjct: 426 SVVGKQVEPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPR 605
Query: 1747 GK 1752
+
Sbjct: 606 AR 611
Score = 45.1 bits (92), Expect(2) = 4e-063
Identities = 27/66 (40%), Positives = 34/66 (51%)
Frame = -2 / -2
Query: 1751 LPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQESSFIWTT 1572
L GALG+ S K + L* T AT CL SSS+ P T ATGISP S + T
Sbjct: 610 LARGALGILSMKITSRTFL**ITSLATNCLTSSSLSSLPLALATKATGISPISGSTCFPT 431
Query: 1571 AASTML 1554
++ +
Sbjct: 430 TEASAM 413
>gb|CD229384.1|CD229384 CCC1_15_E01.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_15_E01_A007 3', mRNA sequence
Length = 613
Score = 269 bits (581), Expect(2) = 3e-094
Identities = 107/132 (81%), Positives = 121/132 (91%)
Frame = +1 / +1
Query: 1183 EAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLM 1362
EAGPVLSMC+AFAKEP VKSGACGTVVRNAELKI+DP+TG SL RN PGEICIRG+Q+M
Sbjct: 1 EAGPVLSMCLAFAKEPFKVKSGACGTVVRNAELKIVDPDTGKSLARNLPGEICIRGQQIM 180
Query: 1363 KGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAML 1542
KGYLNNP+AT +ID++GWLHTGD+G+VDD DEIFIVDRLKE+IKYKG QVAPAE+EA+L
Sbjct: 181 KGYLNNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEALL 360
Query: 1543 IAHPSIVDAAVV 1578
I HPSI DAAVV
Sbjct: 361 ITHPSIADAAVV 396
Score = 198 bits (427), Expect(2) = 7e-061
Identities = 90/131 (68%), Positives = 94/131 (71%)
Frame = -2 / -3
Query: 1577 TTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMV 1398
TTAAS MLGW ATW PLY M SLS STMKISS SST P SPVCS PS SM+
Sbjct: 395 TTAASAMLGWVMSRASISAGATWRPLYFMISLSLSTMKISSSSSTKPTSPVCSQPSASML 216
Query: 1397 FAVASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLA 1218
F VASGL R PF+ C PLMQISPG R RD PVSGS I SSA TTVP APDFT GSLA
Sbjct: 215 FFVASGLFR*PFMICWPLMQISPGRFRARDLPVSGSTILSSALRTTVPHAPDFTLKGSLA 36
Query: 1217 NAMHIESTGPA 1185
NA H++STGPA
Sbjct: 35 NARHMDSTGPA 3
Score = 110 bits (234), Expect(2) = 4e-026
Identities = 49/85 (57%), Positives = 60/85 (70%)
Frame = -1 / -2
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHR 1258
+V+GVQP + VD + R +RVV+V FH LLAPDA+L G V EG G+ VDDL LG+ HHR
Sbjct: 255 DVAGVQPTVSVDAILRRIRVVQVTFHDLLAPDADLSGEVPGEGLAGVGVDDLELGVAHHR 76
Query: 1257 AAGTGLHR*RLLGKRHAHREHRACL 1183
AA GLH LLG+R AH +HR L
Sbjct: 75 AARAGLHLEGLLGERQAHGQHRPSL 1
Score = 99.6 bits (211), Expect(2) = 3e-094
Identities = 38/72 (52%), Positives = 57/72 (79%)
Frame = +1 / +1
Query: 1567 AAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPS 1746
A V + + GEIPVAFV + GS ++ED++KQ+VAK+V++YK++ ++ F++ IPKAPS
Sbjct: 388 AVVGKQVEPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPS 567
Query: 1747 GKILRKDLRAKL 1782
GKILRK+LR +L
Sbjct: 568 GKILRKELRKQL 603
Score = 99.1 bits (210), Expect(2) = 8e-022
Identities = 45/80 (56%), Positives = 55/80 (68%)
Frame = +3 / +3
Query: 1185 GRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQGQAVDE 1364
G GA+ V GV QGA+ GEVR +RHGG + RA+D RP R VP P+P R DLHQG A E
Sbjct: 3 GWAGAVHVPGVRQGALQGEVRRVRHGGAQRRAQDRRPRHRQVPRPEPPRRDLHQGPADHE 182
Query: 1365 RVPQQPGGNGEDHRLGGVAA 1424
R+P+QPG + E HR +AA
Sbjct: 183 RLPEQPGCDEE*HRR*RLAA 242
Score = 95.9 bits (203), Expect = 2e-018
Identities = 45/82 (54%), Positives = 49/82 (59%)
Frame = -3 / -1
Query: 1429 RCAATPPSRWSSPLPPGC*GTLSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPPCRR 1250
RCAA R S PGC G LS +A P*C+S R G G GT R GR S AR +PPCR
Sbjct: 247 RCAANRQRRCYSSSHPGCSGNLS*SAGP*CRSLRGGSGRGTCRCRGRRS*ARRCAPPCRT 68
Query: 1249 HRTSPVTAPWQTPCTSRAPGLP 1184
RTSP APW+TP T AP P
Sbjct: 67 RRTSP*RAPWRTPGTWTAPAQP 2
Score = 67.5 bits (141), Expect = 7e-010
Identities = 30/49 (61%), Positives = 30/49 (61%)
Frame = +2 / +2
Query: 1184 RQARCSRCAWRLPRSRYR*SPVPAARW*GMPS*RSSTRRPGCPSTATSP 1330
R RC CAWR PRS R*SP AARW PS RSST P PS TSP
Sbjct: 2 RLGRCCPCAWRSPRSPSR*SPARAARWCATPSSRSSTPTPASPSPGTSP 148
Score = 58.8 bits (122), Expect(2) = 7e-061
Identities = 33/73 (45%), Positives = 40/73 (54%)
Frame = -2 / -3
Query: 1772 LRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQE 1593
L S ILPDGALG+ S K + L* T AT CL SSS+ P T ATGISP
Sbjct: 593 LSSLRNILPDGALGILSMKITSRTFL**ITSLATNCLTSSSLSSLPLALATKATGISPIS 414
Query: 1592 SSFIWTTAASTML 1554
S + T A++ +
Sbjct: 413 GSTCFPTTAASAM 375
Score = 34.5 bits (69), Expect(2) = 4e-026
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -1 / -2
Query: 1752 LAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDLA 1600
LA W LGD ++E+ LV HL H L D++ G + RD +
Sbjct: 573 LARWGLGDLVNEDHFTDLLVVDHLLGHKLFDVIFTKLAPFGLGHKGDRDFS 421
Score = 30.9 bits (61), Expect(2) = 8e-022
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3 / +3
Query: 1662 QAVRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKA 1781
Q + G+ G +LQE L PQG I QD +G++ A
Sbjct: 483 QTICGQGGDLLQEGP*SDLH*QDPQGPIGQDIAQGAKEAA 602
>gb|CW157694.1|CW157694 104_561_11147661_116_36391_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11147661, DNA
sequence
Length = 611
Score = 295 bits (639), Expect(2) = 8e-094
Identities = 124/133 (93%), Positives = 129/133 (96%)
Frame = +1 / -2
Query: 970 MFELVKRHGITIVPLVLPIAVEMVKSDAIDRHDLSSVRMVISGAAPMGKELQDLLRAKLP 1149
MFELVKRHGIT+VPLVLPIAVEM KSDA+DRHDLSSVRMVISGAAPMG+ELQD LRAKLP
Sbjct: 610 MFELVKRHGITVVPLVLPIAVEMAKSDAMDRHDLSSVRMVISGAAPMGRELQDXLRAKLP 431
Query: 1150 RAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIIDPETGLSLHRNQP 1329
AVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKI+DP+TGLSL RNQP
Sbjct: 430 GAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIVDPDTGLSLRRNQP 251
Query: 1330 GEICIRGKQLMKG 1368
GEICIRGKQLMKG
Sbjct: 250 GEICIRGKQLMKG 212
Score = 287 bits (622), Expect(2) = 5e-090
Identities = 122/133 (91%), Positives = 123/133 (92%)
Frame = -2 / +3
Query: 1367 PFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLANAMHIESTGP 1188
PFINCLPLMQISPGWLR RDSPVSGS I SSAFLTTVPQAPDFTGNGS ANAMHIESTGP
Sbjct: 213 PFINCLPLMQISPGWLRRRDSPVSGSTILSSAFLTTVPQAPDFTGNGSFANAMHIESTGP 392
Query: 1187 ASVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMRTDERSWRSMASLLTISTAMGSTSG 1008
ASVIP PCPSTA GSLARS SCSSLPMGAAPEMTMRT+ERSWRSMASLL ISTAMGSTSG
Sbjct: 393 ASVIPYPCPSTAPGSLARSXSCSSLPMGAAPEMTMRTEERSWRSMASLLAISTAMGSTSG 572
Query: 1007 TIVMPCLFTSSNM 969
T VMPC FTSSNM
Sbjct: 573 TTVMPCRFTSSNM 611
Score = 269 bits (582), Expect = 1e-070
Identities = 113/143 (79%), Positives = 119/143 (83%)
Frame = -1 / +2
Query: 1398 LRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHRAAGTGLHR*RLLG 1219
+R+ R V FHQLLAPDANLPGLVA EGQPG+RVDDL LG+PHHRAAG GLHR RLL
Sbjct: 182 VRKKSRRVLRTFHQLLAPDANLPGLVAAEGQPGVRVDDLELGVPHHRAAGAGLHRQRLLC 361
Query: 1218 KRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGVALD 1039
KRHAH EH +CLCHP+ L EHGA ELGAQ VLQL AHGRGPRDDHAHR EVVAV GVAL
Sbjct: 362 KRHAH*EHGSCLCHPVPLPEHGAGELGAQXVLQLPAHGRGPRDDHAHRGEVVAVHGVALG 541
Query: 1038 HLHRDGQHERHDRDAVPLHQLEH 970
HLH DGQHER D DAVPLHQLEH
Sbjct: 542 HLHGDGQHERDDGDAVPLHQLEH 610
Score = 165 bits (355), Expect(3) = 1e-046
Identities = 67/82 (81%), Positives = 68/82 (82%)
Frame = +2 / -3
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW 1264
WSSRGPRPWA SCRTCCAPSS APCS R G*QRQ CS+CAWRL RSR R*SP PAARW
Sbjct: 495 WSSRGPRPWAGSCRTCCAPSSPAPCSGRGTG*QRQDPCSQCAWRLQRSRCR*SPAPAARW 316
Query: 1265 *GMPS*RSSTRRPGCPSTATSP 1330
*G PS RSSTR PGCPS ATSP
Sbjct: 315 *GTPSSRSSTRTPGCPSAATSP 250
Score = 135 bits (289), Expect = 3e-030
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +3 / -1
Query: 1167 GLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQ 1346
G+ DDRGR AL+VHGVC+GAV GEVR LRHGGEE RA+D RPG RAVPPPQPARGDLHQ
Sbjct: 413 GVRDDRGRTRALNVHGVCKGAVAGEVRRLRHGGEERRAQDRRPGHRAVPPPQPARGDLHQ 234
Query: 1347 GQAVDER 1367
GQAVDER
Sbjct: 233 GQAVDER 213
Score = 131 bits (280), Expect(2) = 4e-039
Identities = 55/67 (82%), Positives = 55/67 (82%)
Frame = -3 / +1
Query: 1366 LSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAPGL 1187
LSSTACP*CKSPRAGCGGGTAR PGR S AR SSPPCRR RTSP TAP QTPCT RA L
Sbjct: 214 LSSTACP*CKSPRAGCGGGTARCPGRRS*ARRSSPPCRRRRTSPATAPLQTPCTLRARVL 393
Query: 1186 PLSSHNP 1166
PLSS P
Sbjct: 394 PLSSRTP 414
Score = 75.3 bits (158), Expect(2) = 8e-094
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +1 / -3
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDD 1452
GYLNNPEATAKTID EGWLHTGDIGYVDD
Sbjct: 87 GYLNNPEATAKTIDDEGWLHTGDIGYVDD 1
Score = 70.3 bits (147), Expect(2) = 5e-090
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -2 / +2
Query: 1451 SSTYPMSPVCSHPSESMVFAVASGLLRYP 1365
SSTYPMSPVCSHPS SMVFAVASGLLRYP
Sbjct: 2 SSTYPMSPVCSHPSSSMVFAVASGLLRYP 88
Score = 57.0 bits (118), Expect(2) = 4e-039
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -3 / +3
Query: 1441 TQCLRCAATPPSRWSSPLPPGC*GTL 1364
TQCLRCAAT RWSSP PPGC*GTL
Sbjct: 12 TQCLRCAATLHRRWSSPWPPGC*GTL 89
Score = 48.7 bits (100), Expect = 3e-004
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -1 / +1
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVP 1366
NVSGVQPP VDGLRR LRVVEVP
Sbjct: 16 NVSGVQPPFIVDGLRRGLRVVEVP 87
Score = 39.6 bits (80), Expect(3) = 1e-046
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +3 / -2
Query: 1365 RVPQQPGGNGEDHRLGGVAA 1424
RVPQQPGG+GEDHR VAA
Sbjct: 88 RVPQQPGGHGEDHRR*RVAA 29
Score = 29.0 bits (57), Expect(3) = 1e-046
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / -1
Query: 1041 QERRHRPPRPLV 1076
QERRH PPRPL+
Sbjct: 539 QERRHGPPRPLL 504
>gb|CW077967.1|CW077967 104_386_10894698_148_31911_378 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894698, DNA
sequence
Length = 748
Score = 176 bits (378), Expect(3) = 5e-092
Identities = 72/76 (94%), Positives = 74/76 (97%)
Frame = +1 / -3
Query: 1141 KLPRAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIIDPETGLSLHR 1320
KLP AVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKI+DP+TGLSL R
Sbjct: 746 KLPGAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIVDPDTGLSLRR 567
Query: 1321 NQPGEICIRGKQLMKG 1368
NQPGEICIRGKQLMKG
Sbjct: 566 NQPGEICIRGKQLMKG 519
Score = 168 bits (361), Expect(3) = 5e-081
Identities = 70/76 (92%), Positives = 70/76 (92%)
Frame = -2 / +1
Query: 1367 PFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLANAMHIESTGP 1188
PFINCLPLMQISPGWLR RDSPVSGS I SSAFLTTVPQAPDFTGNGS ANAMHIESTGP
Sbjct: 520 PFINCLPLMQISPGWLRRRDSPVSGSTILSSAFLTTVPQAPDFTGNGSFANAMHIESTGP 699
Query: 1187 ASVIP*PCPSTARGSL 1140
ASVIP PCPSTA GSL
Sbjct: 700 ASVIPYPCPSTAPGSL 747
Score = 164 bits (352), Expect(3) = 5e-092
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +1 / -1
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLI 1545
GYLNNPEATAKTID EGWLHTGDIGYVDD DEIFIVDRLKELIKYKGFQVAPAELEAMLI
Sbjct: 394 GYLNNPEATAKTIDDEGWLHTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLI 215
Query: 1546 AHPSIVDAAVV 1578
AHPSI DAAVV
Sbjct: 214 AHPSIADAAVV 182
Score = 154 bits (330), Expect(2) = 5e-036
Identities = 64/86 (74%), Positives = 70/86 (81%)
Frame = -1 / +3
Query: 1398 LRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHRAAGTGLHR*RLLG 1219
+R+ R V FHQLLAPDANLPGLVA EGQPG+RVDDL LG+PHHRAAG GLHR RLL
Sbjct: 489 VRKKSRRVLRTFHQLLAPDANLPGLVAAEGQPGVRVDDLELGVPHHRAAGAGLHRQRLLC 668
Query: 1218 KRHAHREHRACLCHPITLSEHGAREL 1141
KRHAH EH +CLCHP+ L EHGA EL
Sbjct: 669 KRHAH*EHGSCLCHPVPLPEHGAGEL 746
Score = 135 bits (289), Expect(3) = 1e-041
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +3 / -2
Query: 1167 GLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQ 1346
G+ DDRGR AL+VHGVC+GAV GEVR LRHGGEE RA+D RPG RAVPPPQPARGDLHQ
Sbjct: 720 GVRDDRGRTRALNVHGVCKGAVAGEVRRLRHGGEERRAQDRRPGHRAVPPPQPARGDLHQ 541
Query: 1347 GQAVDER 1367
GQAVDER
Sbjct: 540 GQAVDER 520
Score = 133 bits (285), Expect(3) = 5e-081
Identities = 57/71 (80%), Positives = 57/71 (80%)
Frame = -2 / +3
Query: 1577 TTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMV 1398
TTAAS MLGW ATWNPLYLMSSLS STMKISS SSTYPMSPVCSHPS SMV
Sbjct: 183 TTAASAMLGWAMSMASSSAGATWNPLYLMSSLSLSTMKISSSSSTYPMSPVCSHPSSSMV 362
Query: 1397 FAVASGLLRYP 1365
FAVASGLLRYP
Sbjct: 363 FAVASGLLRYP 395
Score = 131 bits (280), Expect(4) = 2e-056
Identities = 55/67 (82%), Positives = 55/67 (82%)
Frame = -3 / +2
Query: 1366 LSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAPGL 1187
LSSTACP*CKSPRAGCGGGTAR PGR S AR SSPPCRR RTSP TAP QTPCT RA L
Sbjct: 521 LSSTACP*CKSPRAGCGGGTARCPGRRS*ARRSSPPCRRRRTSPATAPLQTPCTLRARVL 700
Query: 1186 PLSSHNP 1166
PLSS P
Sbjct: 701 PLSSRTP 721
Score = 116 bits (248), Expect = 1e-024
Identities = 50/64 (78%), Positives = 51/64 (79%)
Frame = +2 / -1
Query: 1139 PSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW*GMPS*RSSTRRPGCPST 1318
PSS APCS R G*QRQ CS+CAWRL RSR R*SP PAARW*G PS RSSTR PGCPS
Sbjct: 748 PSSPAPCSGRGTG*QRQDPCSQCAWRLQRSRCR*SPAPAARW*GTPSSRSSTRTPGCPSA 569
Query: 1319 ATSP 1330
ATSP
Sbjct: 568 ATSP 557
Score = 57.0 bits (118), Expect(4) = 2e-056
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -3 / +1
Query: 1441 TQCLRCAATPPSRWSSPLPPGC*GTL 1364
TQCLRCAAT RWSSP PPGC*GTL
Sbjct: 319 TQCLRCAATLHRRWSSPWPPGC*GTL 396
Score = 53.3 bits (110), Expect(4) = 2e-056
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = -3 / +1
Query: 1543 *AWPRAPPERLGTPCT**AP*A 1478
*AWPRAPPERLGTPCT**AP*A
Sbjct: 217 *AWPRAPPERLGTPCT**AP*A 282
Score = 48.7 bits (100), Expect = 3e-004
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -1 / +2
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVP 1366
NVSGVQPP VDGLRR LRVVEVP
Sbjct: 323 NVSGVQPPFIVDGLRRGLRVVEVP 394
Score = 48.3 bits (99), Expect(3) = 5e-081
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -1 / +3
Query: 1638 AAGRHDERHRDLAAGVILH 1582
AAGRHDERHRDLAAGV+LH
Sbjct: 12 AAGRHDERHRDLAAGVVLH 68
Score = 46.9 bits (96), Expect(3) = 5e-092
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1 / -3
Query: 1579 QMKDDSCGEIPVAFVVASGG 1638
+MKDDSCGEIPVAFVV SGG
Sbjct: 71 RMKDDSCGEIPVAFVVTSGG 12
Score = 46.0 bits (94), Expect(4) = 2e-056
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2 / +1
Query: 1637 PPDATTNATGISPQESSFI 1581
PPD TTNATGISPQESSFI
Sbjct: 13 PPDVTTNATGISPQESSFI 69
Score = 42.8 bits (87), Expect(3) = 1e-041
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3 / -3
Query: 1479 AQGAHQVQGVPSRSGGA 1529
AQGAHQVQGVPSRSGGA
Sbjct: 281 AQGAHQVQGVPSRSGGA 231
Score = 39.6 bits (80), Expect(3) = 1e-041
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +3 / -3
Query: 1365 RVPQQPGGNGEDHRLGGVAA 1424
RVPQQPGG+GEDHR VAA
Sbjct: 395 RVPQQPGGHGEDHRR*RVAA 336
Score = 24.0 bits (46), Expect(2) = 5e-036
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / +2
Query: 1542 EHGLELRRS 1516
EHGLELRRS
Sbjct: 218 EHGLELRRS 244
>gb|CN129170.1|CN129170 RHOH1_33_H09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_33_H09_A002 5', mRNA sequence
Length = 712
Score = 288 bits (624), Expect(3) = 3e-087
Identities = 124/127 (97%), Positives = 125/127 (98%)
Frame = +1 / +3
Query: 187 TTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAG 366
TTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDR+SRRVAAG
Sbjct: 111 TTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRVSRRVAAG 290
Query: 367 MRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATV 546
MRA LGVRSGGTVMLLLPN VEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATV
Sbjct: 291 MRAALGVRSGGTVMLLLPNCVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATV 470
Query: 547 VITEPAF 567
VITEPAF
Sbjct: 471 VITEPAF 491
Score = 164 bits (353), Expect(6) = 2e-071
Identities = 71/76 (93%), Positives = 72/76 (94%)
Frame = -2 / -1
Query: 566 NAGSVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLR 387
NAGSVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANST+FG SSITVPPLR
Sbjct: 490 NAGSVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTQFGSSSITVPPLR 311
Query: 386 TPRQARIPAATRRDRR 339
TP ARIPAATRRD R
Sbjct: 310 TPSAARIPAATRRDTR 263
Score = 62.5 bits (130), Expect(6) = 2e-071
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = -1 / -3
Query: 669 IVGGGSEVGERDAALCAVARGDDGDAGEPPH 577
+VGG E+GE DAAL AVARGDDGDAGEPPH
Sbjct: 593 VVGGVGELGEGDAALGAVARGDDGDAGEPPH 501
Score = 55.1 bits (114), Expect(3) = 3e-087
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +1 / +3
Query: 730 LPYSSGTTGLPKGVMLSHRGLV 795
LPYSSGTTGLPKGVMLSHRGLV
Sbjct: 645 LPYSSGTTGLPKGVMLSHRGLV 710
Score = 52.8 bits (109), Expect(6) = 2e-071
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -2 / -1
Query: 797 VTSPRCDSITPLGSPVVPDEYG 732
VTSPRCDSITPLGSPVVPDE G
Sbjct: 712 VTSPRCDSITPLGSPVVPDE*G 647
Score = 50.6 bits (104), Expect(5) = 5e-016
Identities = 25/50 (50%), Positives = 27/50 (54%)
Frame = -1 / -3
Query: 441 ECELHGVWEKQHXXXXXXXXXXXXXXXRDAS*QAVHVAEGERFARGAVDE 292
E EL VWE+QH RDA+ AVHVAE ER RGAVDE
Sbjct: 365 ERELDAVWEQQHHRPTAADAERGAHPRRDAARHAVHVAERERLPRGAVDE 216
Score = 39.1 bits (79), Expect(5) = 5e-016
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1 / -3
Query: 795 YQPTVRQHHPLGQPRRA 745
+QP VRQHH LGQPRRA
Sbjct: 710 HQPAVRQHHALGQPRRA 660
Score = 37.7 bits (76), Expect(4) = 1e-008
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3 / +2
Query: 735 VLVRHDGAAQGGDAVAP 785
+LVRHDGAAQG DAVAP
Sbjct: 650 LLVRHDGAAQGRDAVAP 700
Score = 37.3 bits (75), Expect(4) = 1e-008
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 477 HHGQPAPHPARD 512
HHGQPAPHPARD
Sbjct: 401 HHGQPAPHPARD 436
Score = 32.7 bits (65), Expect(2) = 2.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -3 / -2
Query: 793 PAHGATASPPWAAP 752
PA GATAS PWAAP
Sbjct: 708 PARGATASRPWAAP 667
Score = 32.2 bits (64), Expect(6) = 2e-071
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2 / -1
Query: 113 GVTCRRQEACCFR 75
G TC+ QEACCFR
Sbjct: 43 GATCKSQEACCFR 5
Score = 29.9 bits (59), Expect(5) = 5e-016
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 114 WSYVQETRGLLLP 76
WSYVQE R LLLP
Sbjct: 44 WSYVQEPRSLLLP 6
Score = 28.6 bits (56), Expect(6) = 2e-071
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2 / -1
Query: 221 AMSGSVERNTVV 186
AMSGSVERNTVV
Sbjct: 145 AMSGSVERNTVV 110
Score = 26.7 bits (52), Expect(3) = 3e-087
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3 / +2
Query: 75 PEAASLLSPARNSSLQRHTYTSAGSEEDGVAYG 173
PEAAS L+ AR+S+ G +DG A G
Sbjct: 5 PEAASFLALARSSNPASSATREDGVADDGGAEG 103
Score = 24.4 bits (47), Expect(2) = 2.0
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3 / -2
Query: 115 LELRAGDKRLAASG 74
LELRA K+LAASG
Sbjct: 45 LELRARAKKLAASG 4
Score = 24.4 bits (47), Expect(6) = 2e-071
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1 / -1
Query: 132 TCGAGGW 112
TCGAGGW
Sbjct: 67 TCGAGGW 47
Score = 24.0 bits (46), Expect(4) = 1e-008
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 76 RKQQASCLLHV 108
RKQQAS LLHV
Sbjct: 6 RKQQASWLLHV 38
Score = 23.5 bits (45), Expect(5) = 5e-016
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = -3 / -3
Query: 136 VYVWRWRLE 110
++VWRWRL+
Sbjct: 71 LHVWRWRLD 45
Score = 23.5 bits (45), Expect(4) = 1e-008
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 110 LQPPAPHVHL 139
+QPPAPHV +
Sbjct: 45 IQPPAPHVKM 74
Score = 23.1 bits (44), Expect(5) = 5e-016
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / -2
Query: 217 CPEASSGTP 191
CP ASSGTP
Sbjct: 141 CPGASSGTP 115
>gb|CW128046.1|CW128046 104_509_11113781_116_34744_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113781, DNA
sequence
Length = 650
Score = 177 bits (380), Expect(2) = 1e-081
Identities = 74/80 (92%), Positives = 77/80 (96%)
Frame = +1 / -3
Query: 1579 QMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKIL 1758
+MKDDSCGEIPVAFVV SGG +TEDEIKQYVAKQVVFYKRLHK+FFVEAIPKAPSGKIL
Sbjct: 327 RMKDDSCGEIPVAFVVTSGGYEMTEDEIKQYVAKQVVFYKRLHKVFFVEAIPKAPSGKIL 148
Query: 1759 RKDLRAKLASGFSNGSSC*C 1818
RKDLRAKLASGFSNGSSC*C
Sbjct: 147 RKDLRAKLASGFSNGSSC*C 88
Score = 174 bits (374), Expect(2) = 3e-072
Identities = 73/79 (92%), Positives = 75/79 (94%)
Frame = -2 / +2
Query: 1817 HQHDDPLENPDASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPE 1638
HQHDDPLENPDASFALRSFL+ILPDGALG+ASTKK LCSLL*NTTCFATYCLISSSVI
Sbjct: 89 HQHDDPLENPDASFALRSFLRILPDGALGIASTKKTLCSLL*NTTCFATYCLISSSVIS* 268
Query: 1637 PPDATTNATGISPQESSFI 1581
PPD TTNATGISPQESSFI
Sbjct: 269 PPDVTTNATGISPQESSFI 325
Score = 158 bits (339), Expect(3) = 1e-052
Identities = 67/79 (84%), Positives = 70/79 (88%)
Frame = -1 / +1
Query: 1818 ASTR*PVGESRRQLCSQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPG 1639
ASTR* +G+SRR LCSQILP NLA WRLGD LHEEDLVQPLVEHHLFRHVL DLVLG
Sbjct: 88 ASTR*SIGKSRR*LCSQILPQNLARWRLGDSLHEEDLVQPLVEHHLFRHVLFDLVLGHLV 267
Query: 1638 AAGRHDERHRDLAAGVILH 1582
AAGRHDERHRDLAAGV+LH
Sbjct: 268 AAGRHDERHRDLAAGVVLH 324
Score = 149 bits (321), Expect(2) = 1e-081
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +1 / -1
Query: 1378 NPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPS 1557
+PEATAKTID EGWLHTGD+GYVDD DEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPS
Sbjct: 638 HPEATAKTIDDEGWLHTGDMGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPS 459
Query: 1558 IVDAAVV 1578
I DAAVV
Sbjct: 458 IADAAVV 438
Score = 121 bits (258), Expect(2) = 3e-072
Identities = 52/66 (78%), Positives = 52/66 (78%)
Frame = -2 / +1
Query: 1577 TTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMV 1398
TTAAS MLGW ATWNPLYLMSSLS STMKISS SSTYPMSPVCSHPS SMV
Sbjct: 439 TTAASAMLGWAMSMASSSAGATWNPLYLMSSLSLSTMKISSSSSTYPMSPVCSHPSSSMV 618
Query: 1397 FAVASG 1380
FAVASG
Sbjct: 619 FAVASG 636
Score = 97.3 bits (206), Expect(3) = 5e-027
Identities = 42/52 (80%), Positives = 45/52 (86%)
Frame = +3 / -2
Query: 1662 QAVRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKAGVWILQRVIVLM 1817
Q VRGETGGVLQEAAQ LLRGG+PQGAI QD +EGSESKA VWI Q +IVLM
Sbjct: 244 QTVRGETGGVLQEAAQGLLRGGYPQGAIWQDSEEGSESKASVWIFQWIIVLM 89
Score = 83.5 bits (176), Expect(3) = 3e-021
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -3 / +3
Query: 1816 INTMTRWRIQTPALLSDPSLKSCRMAPWGWPPRRRSCAASC 1694
INTM W+IQT ALLSDPS +SC+MAPWG PPRRR CAASC
Sbjct: 90 INTMIHWKIQTLALLSDPSSESCQMAPWG*PPRRRPCAASC 212
Score = 53.3 bits (110), Expect(3) = 1e-052
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = -3 / +2
Query: 1543 *AWPRAPPERLGTPCT**AP*A 1478
*AWPRAPPERLGTPCT**AP*A
Sbjct: 473 *AWPRAPPERLGTPCT**AP*A 538
Score = 50.1 bits (103), Expect = 1e-004
Identities = 24/40 (60%), Positives = 24/40 (60%)
Frame = +2 / -1
Query: 1700 GCTXXXXXXXXXXXHPARF*GRI*EQSWRLDSPTGHRVDA 1819
GCT H ARF*GRI*EQS RLD P HRVDA
Sbjct: 206 GCTRSSSWRLSPRRHLARF*GRI*EQS*RLDFPMDHRVDA 87
Score = 42.8 bits (87), Expect(3) = 1e-052
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = -3 / +2
Query: 1441 TQCLRCAATPPSRWSSPLPPG 1379
T CLRCAAT RWSSP PPG
Sbjct: 575 TPCLRCAATLHRRWSSPWPPG 637
Score = 42.8 bits (87), Expect(3) = 5e-027
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3 / -3
Query: 1479 AQGAHQVQGVPSRSGGA 1529
AQGAHQVQGVPSRSGGA
Sbjct: 537 AQGAHQVQGVPSRSGGA 487
Score = 40.5 bits (82), Expect(3) = 3e-021
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = -1 / +3
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVP 1366
+VSGVQPP VDGLRR LRV+ P
Sbjct: 579 HVSGVQPPFIVDGLRRGLRVLRYP 650
Score = 27.6 bits (54), Expect(3) = 5e-027
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3 / -3
Query: 1380 PGGNGEDHRLGGVAA 1424
PGG+GEDHR VAA
Sbjct: 636 PGGHGEDHRR*RVAA 592
Score = 24.0 bits (46), Expect(3) = 3e-021
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / +3
Query: 1542 EHGLELRRS 1516
EHGLELRRS
Sbjct: 474 EHGLELRRS 500
>gb|CX613435.1|CX613435 GABR1_8_D10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_D10_A002 3', mRNA sequence
Length = 693
Score = 305 bits (660), Expect = 2e-081
Identities = 123/158 (77%), Positives = 141/158 (89%)
Frame = +1 / +3
Query: 1318 RNQPGEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIK 1497
RNQPGEICIRG+Q+MKGYLN+ E+T TID +GWLHTGDIGYVDD DEIFIVDRLKE+IK
Sbjct: 3 RNQPGEICIRGEQIMKGYLNDLESTKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIK 182
Query: 1498 YKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVA 1677
YKGFQV PAELEA+LI HP I DAAVV MKDD GEIPVAF+V + GS +TEDEIKQ+VA
Sbjct: 183 YKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTEDEIKQFVA 362
Query: 1678 KQVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLASG 1791
K+VVFYK++HK+FF E+IPK PSGKILRKDLRA+LA+G
Sbjct: 363 KEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAG 476
Score = 209 bits (450), Expect = 2e-052
Identities = 102/162 (62%), Positives = 106/162 (65%)
Frame = -2 / -3
Query: 1802 PLENPDASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDAT 1623
P P AS AL+SFL+ILPDG LGM S KK L L* TT AT CLISSSV EP T
Sbjct: 487 PQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVTSEPSVRT 308
Query: 1622 TNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSST 1443
ATGISP SSFI TTAAS + G TWNPLYLM SLS STMKISS SST
Sbjct: 307 MKATGISPARSSFIDTTAASLISGCVMRSASSSAGGTWNPLYLMISLSLSTMKISSSSST 128
Query: 1442 YPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISPGWLR 1317
PMSPVCS PS SMVF V S R PF+ C P MQISPGW R
Sbjct: 127 *PMSPVCSQPSLSMVFFVDSRSFR*PFMICSPRMQISPGWFR 2
Score = 82.2 bits (173), Expect(3) = 3e-028
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = -1 / -2
Query: 1773 SQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDLAAG 1594
SQ+LP*+LAG LGDG EE+LV LVE+HL LLDL+LGD A G HDE RD +
Sbjct: 458 SQVLP*DLAGRVLGDGFSEENLVDLLVENHLLGDKLLDLILGDFRAFGPHDEGDRDFTSK 279
Query: 1593 VILH 1582
+ILH
Sbjct: 278 IILH 267
Score = 51.9 bits (107), Expect(3) = 3e-028
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = -1 / -2
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLV 1321
+V+GVQP + VDG+ L+VV+V FH LLA DA+L GLV
Sbjct: 122 DVAGVQPAVLVDGVLCRLKVVQVTFHDLLAADADLAGLV 6
Score = 43.7 bits (89), Expect(3) = 4e-012
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +3 / +2
Query: 1662 QAVRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKA 1781
QA+ + GG LQE Q L HPQ +RQD KEG ES+A
Sbjct: 347 QAICRQGGGFLQEDPQGFLH*IHPQEPVRQDPKEGLESQA 466
Score = 43.2 bits (88), Expect(2) = 1e-008
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / -1
Query: 1780 ALLSDPSLKSCRMAPWGWPPRRRSCAASC 1694
A LS PSL SCR WGW R+ C +SC
Sbjct: 465 AWLSSPSLGSCRTGSWGWIQ*RKPCGSSC 379
Score = 42.8 bits (87), Expect(3) = 4e-012
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +3 / +2
Query: 1317 PQPARGDLHQGQAVDERVPQQPGGNGEDHRLGGVAA 1424
P+PAR DLH +A ER+P++P + E HR G +AA
Sbjct: 2 PEPARRDLHPRRADHERLPERP*VDKEHHRQGRLAA 109
Score = 42.3 bits (86), Expect(2) = 1e-008
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = -3 / -1
Query: 1441 TQCLRCAATPPSRWSSPLPPGC*GTLSSTACP*CKSPRAGCG 1316
++C RCAA+ P RW S G G LS +A C+S RAG G
Sbjct: 126 SRCRRCAASRPCRWCSLSTQGRSGNLS*SARRGCRSRRAGSG 1
Score = 31.8 bits (63), Expect(3) = 3e-028
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -3 / -1
Query: 1534 PRAPPERLGTPCT**AP*A 1478
PRA P GTPCT**+P*A
Sbjct: 219 PRARPAAPGTPCT**SP*A 163
Score = 30.4 bits (60), Expect(3) = 4e-012
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3 / +2
Query: 1479 AQGAHQVQGVPSRSGGA 1529
AQG HQVQGVP +G A
Sbjct: 164 AQGDHQVQGVPGAAGRA 214
>gb|CW157695.1|CW157695 104_561_11147661_148_36392_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11147661, DNA
sequence
Length = 548
Score = 248 bits (536), Expect(2) = 4e-073
Identities = 107/110 (97%), Positives = 108/110 (98%)
Frame = +1 / +3
Query: 238 PLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAGMRACLGVRSGGTVMLLL 417
PLHDYVLERLAERRDRACLIDGATGETLTFGDVDR+SRRVAAGMRA LGVRSGGTVMLLL
Sbjct: 3 PLHDYVLERLAERRDRACLIDGATGETLTFGDVDRVSRRVAAGMRAALGVRSGGTVMLLL 182
Query: 418 PNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVITEPAF 567
PN VEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVITEPAF
Sbjct: 183 PNCVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVITEPAF 332
Score = 164 bits (353), Expect(3) = 9e-061
Identities = 71/76 (93%), Positives = 72/76 (94%)
Frame = -2 / -2
Query: 566 NAGSVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLR 387
NAGSVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANST+FG SSITVPPLR
Sbjct: 331 NAGSVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTQFGSSSITVPPLR 152
Query: 386 TPRQARIPAATRRDRR 339
TP ARIPAATRRD R
Sbjct: 151 TPSAARIPAATRRDTR 104
Score = 62.5 bits (130), Expect(3) = 9e-061
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = -1 / -1
Query: 669 IVGGGSEVGERDAALCAVARGDDGDAGEPPH 577
+VGG E+GE DAAL AVARGDDGDAGEPPH
Sbjct: 434 VVGGVGELGEGDAALGAVARGDDGDAGEPPH 342
Score = 53.3 bits (110), Expect(2) = 4e-073
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / +3
Query: 730 LPYSSGTTGLPKGVMLSHRGL 792
LPYSSGTTGLPKGVMLSHRGL
Sbjct: 486 LPYSSGTTGLPKGVMLSHRGL 548
Score = 50.6 bits (104), Expect(2) = 1e-009
Identities = 25/50 (50%), Positives = 27/50 (54%)
Frame = -1 / -1
Query: 441 ECELHGVWEKQHXXXXXXXXXXXXXXXRDAS*QAVHVAEGERFARGAVDE 292
E EL VWE+QH RDA+ AVHVAE ER RGAVDE
Sbjct: 206 ERELDAVWEQQHHRPAAADAERGAHPRRDAARHAVHVAERERLPRGAVDE 57
Score = 48.7 bits (100), Expect(3) = 9e-061
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = -2 / -2
Query: 791 SPRCDSITPLGSPVVPDEYG 732
SPRCDSITPLGSPVVPDE G
Sbjct: 547 SPRCDSITPLGSPVVPDE*G 488
Score = 38.2 bits (77), Expect(2) = 1e-009
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -1 / -1
Query: 792 QPTVRQHHPLGQPRRA 745
QP VRQHH LGQPRRA
Sbjct: 548 QPAVRQHHALGQPRRA 501
Score = 37.7 bits (76), Expect(2) = 1e-005
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3 / +2
Query: 735 VLVRHDGAAQGGDAVAP 785
+LVRHDGAAQG DAVAP
Sbjct: 491 LLVRHDGAAQGRDAVAP 541
Score = 37.3 bits (75), Expect(2) = 1e-005
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 477 HHGQPAPHPARD 512
HHGQPAPHPARD
Sbjct: 242 HHGQPAPHPARD 277
>gb|CF430022.1|CF430022 PH1_25_E11.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_E11_A002 5', mRNA sequence
Length = 737
Score = 172 bits (370), Expect(3) = 2e-068
Identities = 66/96 (68%), Positives = 85/96 (88%)
Frame = +1 / +1
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQLVDGDNPNLHFREDDVVLCVLPMFHVYSLHSIL 909
LPYSSGTTGLPKGVML+HR L+TSVAQ VDG+NPNL+F +DDVVLC+LP+FH+YSL+S+L
Sbjct: 448 LPYSSGTTGLPKGVMLTHRSLITSVAQQVDGENPNLYFSKDDVVLCLLPLFHIYSLNSVL 627
Query: 910 LCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLV 1017
L G+RAG+ +VIM++FD + +LV++HGITI P V
Sbjct: 628 LAGLRAGSTIVIMRKFDLGALVDLVRKHGITIAPFV 735
Score = 113 bits (242), Expect(3) = 6e-038
Identities = 55/95 (57%), Positives = 59/95 (62%)
Frame = -2 / -1
Query: 1016 TSGTIVMPCLFTSSNMRRVSKRFMITSAAPARIPHSRMECSEYTWNMGSTQRTTSSSRKW 837
T G +VMPCL T S S MIT PAR P S E SE WN GS Q TTSS K+
Sbjct: 734 TKGAMVMPCLRTRSTSAPRSNLRMITMVDPARSPASSTELSE*MWNSGSRQSTTSSLLKY 555
Query: 836 RFGLSPSTSCATLVTSPRCDSITPLGSPVVPDEYG 732
RFG SPST CATLV R S+TPLG PVVP+E G
Sbjct: 554 RFGFSPSTCCATLVMRLRWVSMTPLGRPVVPEE*G 450
Score = 82.2 bits (173), Expect(3) = 2e-068
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = +1 / +1
Query: 352 RVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAA 531
R AA +GV G VM LL N EFA FL +RLGAA TTANP +TP EI +QA A
Sbjct: 82 RRAASGLRAMGVGKGDVVMNLLRNCPEFAFTFLGAARLGAATTTANPFYTPHEIHRQAEA 261
Query: 532 SGATVVITE 558
+GA V++TE
Sbjct: 262 AGAKVIVTE 288
Score = 57.4 bits (119), Expect(3) = 6e-038
Identities = 33/69 (47%), Positives = 37/69 (53%)
Frame = -2 / -1
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPR 378
SV T+AP A+A IS GV +GLAVV AAP R R ANS + IT PL TP
Sbjct: 287 SVTMTLAPAASAWRWISCGV*NGLAVVVAAPSRAAPRKVKANSGQLRSRFITTSPLPTPM 108
Query: 377 QARIPAATR 351
AA R
Sbjct: 107 ARSPDAARR 81
Score = 53.3 bits (110), Expect(3) = 2e-068
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +1 / +1
Query: 268 AERRDRACLIDGATGETLTFGDVDRLSRRVAAGMRA 375
+E DRACLIDG TG + T+ +V+ LSRR A+G+RA
Sbjct: 1 SEVADRACLIDGQTGASYTYAEVESLSRRAASGLRA 108
Score = 50.6 bits (104), Expect(2) = 1e-005
Identities = 23/49 (46%), Positives = 26/49 (53%)
Frame = -1 / -3
Query: 1017 HERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHGQ 871
HE D DAV HQ+ VE HDH+ A P QQ V+RV VE Q
Sbjct: 735 HEGRDGDAVLAHQVHQRAQVELAHDHDGGPRAQPRQQHRVERVDVEQRQ 589
Score = 27.6 bits (54), Expect(3) = 6e-038
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1 / -3
Query: 660 GGSEVGERDAALCAVARGDDGDA 592
G +GE AA+ A GDDGDA
Sbjct: 399 GRDRLGELHAAVEAAVDGDDGDA 331
Score = 24.4 bits (47), Expect(2) = 1e-005
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -2 / -1
Query: 473 AAPRREHARNASANSTEFGRSSITVPPLRTPRQAR 369
AAPR+ A + S S + P R+P AR
Sbjct: 188 AAPRKVKANSGQLRSRFITTSPLPTPMARSPDAAR 84
>gb|CW380206.1|CW380206 fsbb001f059o07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f059o07, DNA
sequence
Length = 683
Score = 143 bits (306), Expect(3) = 3e-068
Identities = 57/72 (79%), Positives = 63/72 (87%)
Frame = +1 / -1
Query: 1165 QGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIIDPETGLSLHRNQPGEICI 1344
QGYGMTEAGPVLSMC AFAKEP P K G+CGTVVRNAELK++DP+TGLSL RN PGEICI
Sbjct: 659 QGYGMTEAGPVLSMCPAFAKEPTPAKPGSCGTVVRNAELKVVDPDTGLSLGRNLPGEICI 480
Query: 1345 RGKQLMKGYLNN 1380
RG Q+MKG + N
Sbjct: 479 RGPQIMKGTVIN 444
Score = 111 bits (236), Expect(3) = 3e-068
Identities = 42/50 (84%), Positives = 48/50 (96%)
Frame = +1 / -1
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQV 1515
GYLN+PEATA+TID +GWLHTGDIGYVDD DE+FIVDR+KELIK+KGFQV
Sbjct: 344 GYLNDPEATARTIDVDGWLHTGDIGYVDDDDEVFIVDRVKELIKFKGFQV 195
Score = 102 bits (218), Expect(2) = 3e-039
Identities = 46/72 (63%), Positives = 51/72 (70%)
Frame = -2 / +1
Query: 1379 LLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLANAMHIE 1200
L+ PF+ C P MQISPG LR R+ PVSGS SSA TTVP P G GSLANA H++
Sbjct: 445 LITVPFMICGPRMQISPGRLRPRERPVSGSTTLSSALRTTVPHDPGLAGVGSLANAGHMD 624
Query: 1199 STGPASVIP*PC 1164
STGPASVIP PC
Sbjct: 625 STGPASVIPYPC 660
Score = 82.2 bits (173), Expect(2) = 3e-039
Identities = 37/50 (74%), Positives = 39/50 (78%)
Frame = -2 / +1
Query: 1514 TWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYP 1365
TW PL LMSSL+RSTMK SS SST PMSPV S PS S+V AVASG RYP
Sbjct: 196 TWKPLNLMSSLTRSTMKTSSSSST*PMSPVWSQPSTSIVLAVASGSFRYP 345
Score = 78.0 bits (164), Expect(2) = 1e-017
Identities = 38/73 (52%), Positives = 44/73 (60%)
Frame = -1 / +3
Query: 1365 FHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHRAAGTGLHR*RLLGKRHAHREHRAC 1186
FH L APDA+L G VA EG+ + V L LGI HHRAA L RLLG+R AH +H
Sbjct: 459 FHDLRAPDADLAGEVAAEGEARVGVHHLELGIAHHRAARPRLGGRRLLGERRAHGQHGPG 638
Query: 1185 LCHPITLSEHGAR 1147
L HP+ L G R
Sbjct: 639 LRHPVPLQPPGRR 677
Score = 69.3 bits (145), Expect(3) = 2e-016
Identities = 32/67 (47%), Positives = 39/67 (58%)
Frame = +3 / -3
Query: 1167 GLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQ 1346
G+ DD GR A+ V GV QGA + +RHGG +CRA+ P +P PQP R DLH
Sbjct: 657 GVRDDGGRARAVHVPGVRQGADARQAGVVRHGGAQCRAQGGGPRHGPLPRPQPPRRDLHP 478
Query: 1347 GQAVDER 1367
G A ER
Sbjct: 477 GPADHER 457
Score = 62.0 bits (129), Expect(2) = 2e-010
Identities = 30/67 (44%), Positives = 35/67 (52%)
Frame = -3 / +2
Query: 1366 LSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAPGL 1187
LS +A P C+S R GCG G G ARH +PPCR +APW+TP T A
Sbjct: 458 LS*SAGPGCRSRRGGCGRGRGPCRGPPP*ARHCAPPCRTTPAWRASAPWRTPGTWTARAR 637
Query: 1186 PLSSHNP 1166
P SS P
Sbjct: 638 PPSSRTP 658
Score = 49.6 bits (102), Expect = 2e-004
Identities = 29/59 (49%), Positives = 30/59 (50%)
Frame = +2 / -2
Query: 1154 PCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW*GMPS*RSSTRRPGCPSTATSP 1330
P R G*+R C CA R PRSR S AARW MPS R T PS ATSP
Sbjct: 670 PGGCRGTG*RRPGPCCPCARRSPRSRRPPSRGRAARWCAMPSSRWWTPTRASPSAATSP 494
Score = 46.9 bits (96), Expect(3) = 3e-068
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +1 / -3
Query: 1510 QVAPAELEAMLIAHPSIVDAAVV 1578
QV PAELEA+LIAHPSI DAAVV
Sbjct: 87 QVPPAELEALLIAHPSIADAAVV 19
Score = 34.5 bits (69), Expect(2) = 1e-017
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = -3 / +2
Query: 1510 GTPCT**AP*AGXXXXXXXXXXRTQCLRCAATPPSRWSSPLPPGC*GTL 1364
G+P T**AP* G R++C RC A+ R S PPG GTL
Sbjct: 200 GSP*T**AP*RGRR*RPRRRRRRSRCRRCGASRRRRSSWRWPPGRSGTL 346
Score = 30.9 bits (61), Expect(3) = 2e-016
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3 / -3
Query: 1476 PAQGAHQVQGVPSRS 1520
P QGAHQVQG+P S
Sbjct: 234 PRQGAHQVQGLPGNS 190
Score = 26.3 bits (51), Expect(2) = 2e-010
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1 / +3
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVP 1366
+V+GV+P + VD LRVV+VP
Sbjct: 273 DVAGVEPAVDVDRPGGGLRVVQVP 344
Score = 25.4 bits (49), Expect(3) = 2e-016
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3 / -3
Query: 1365 RVPQQPGGNGEDHR 1406
RVP++PGG+ +D R
Sbjct: 345 RVPERPGGHRQDDR 304
>gb|BE597495.1|BE597495 PI1_70_C05.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 438
Score = 251 bits (542), Expect = 3e-065
Identities = 101/143 (70%), Positives = 119/143 (83%)
Frame = +1 / +1
Query: 829 PNLHFREDDVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIV 1008
PN+ F DDV+LC LPMFH+YSL++I++CG+R GAA+V+M+RFD RM ELV+RH ITI
Sbjct: 10 PNIGFTADDVILCSLPMFHIYSLNTIMMCGLRVGAAIVVMRRFDLARMMELVERHRITIA 189
Query: 1009 PLVLPIAVEMVKSDAIDRHDLSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEA 1188
PLV PI V + KSD HDLSSVRMV+SGAAPMGK+++D AKLP AVLGQGYGMTEA
Sbjct: 190 PLVPPIVVAVAKSDEAASHDLSSVRMVLSGAAPMGKDIEDAFMAKLPGAVLGQGYGMTEA 369
Query: 1189 GPVLSMCMAFAKEPLPVKSGACG 1257
GPVLSMC+AFAKEP VKSGACG
Sbjct: 370 GPVLSMCLAFAKEPFKVKSGACG 438
Score = 178 bits (384), Expect = 2e-043
Identities = 83/143 (58%), Positives = 96/143 (67%)
Frame = -2 / -2
Query: 1256 PQAPDFTGNGSLANAMHIESTGPASVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMRT 1077
P APDFT GSLANA H++STGPASV+P PCPSTA GSLA S S PMGAAPE T+ T
Sbjct: 437 PHAPDFTLKGSLANARHMDSTGPASVMPYPCPSTAPGSLAMKASSMSFPMGAAPESTILT 258
Query: 1076 DERSWRSMASLLTISTAMGSTSGTIVMPCLFTSSNMRRVSKRFMITSAAPARIPHSRMEC 897
++RSW + +SLL +T MG TSG +V+ TSS + SKR M T AAP R PH M
Sbjct: 257 EDRSWDAASSLLATATTMGGTSGAMVIRWRSTSSIILARSKRRMTTMAAPTRRPHIMMVL 78
Query: 896 SEYTWNMGSTQRTTSSSRKWRFG 828
SE WNMGS R TSS+ K G
Sbjct: 77 SE*MWNMGSEHRITSSAVKPMLG 9
Score = 147 bits (315), Expect = 7e-034
Identities = 68/129 (52%), Positives = 79/129 (61%)
Frame = -1 / -1
Query: 1257 AAGTGLHR*RLLGKRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHAH 1078
AA GLH LLG+R AH +HR L H + LSEHGA ELG + VL +L HGRG + H
Sbjct: 438 AARAGLHLEGLLGERQAHGQHRPSLRHAVPLSEHGAGELGHEGVLDVLPHGRGAGEHHPD 259
Query: 1077 RREVVAVDGVALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGV 898
+VV VAL DG+HER D D V LH+L H VEA HDH+ A A A DGV
Sbjct: 258 GGQVVGRGLVALGDGDHDGRHERGDGDPVALHELHHPGEVEAAHDHDGGADAEAAHHDGV 79
Query: 897 QRVHVEHGQ 871
+RV VEHGQ
Sbjct: 78 ERVDVEHGQ 52
Score = 79.4 bits (167), Expect(2) = 2e-014
Identities = 34/57 (59%), Positives = 36/57 (63%)
Frame = +2 / +2
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPA 1255
W S PRPW R+ RT PSS APCSDR *+R RC CAWR PRS R*SP A
Sbjct: 266 WCSPAPRPWGRTSRTPSWPSSPAPCSDRGTA*RRLGRCCPCAWRSPRSPSR*SPARA 436
Score = 39.6 bits (80), Expect(2) = 0.024
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -3 / -3
Query: 1255 RRHRTSPVTAPWQTPCTSRAPGLPLSSHNPV 1163
R RTSP APW+TP T AP P S PV
Sbjct: 436 RTRRTSP*RAPWRTPGTWTAPAQPPSCRTPV 344
Score = 35.4 bits (71), Expect = 3.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3 / +3
Query: 1164 TGLWDDRGRPGALDVHGVCQGAVTGEVRCLR 1256
TG+ D G GA+ V GV QGA+ GEVR +R
Sbjct: 345 TGVRHDGGWAGAVHVPGVRQGALQGEVRRVR 437
Score = 23.5 bits (45), Expect(2) = 0.024
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1 / -1
Query: 1089 DHAHRREVVAVDGVALDHLHRDGQHE 1012
DH R E D VAL LH G+ E
Sbjct: 213 DHDGRHERGDGDPVALHELHHPGEVE 136
Score = 22.1 bits (42), Expect(2) = 2e-014
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3 / +3
Query: 1041 QERRHRPPRPLV 1076
QERR R PRP++
Sbjct: 222 QERRGRVPRPVL 257
>gb|CD429206.1|CD429206 ETH1_3_C09.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_3_C09_A002 3', mRNA sequence
Length = 652
Score = 158 bits (340), Expect(2) = 4e-061
Identities = 61/78 (78%), Positives = 72/78 (92%)
Frame = +1 / +2
Query: 1345 RGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPA 1524
RG+Q+MKGYLNNP+AT +ID++GWLHTGD+G+VDD DEIFIVDRLKE+IKYKG QVAPA
Sbjct: 2 RGQQIMKGYLNNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPA 181
Query: 1525 ELEAMLIAHPSIVDAAVV 1578
E+EA+LI HPSI DAAVV
Sbjct: 182 EIEALLITHPSIADAAVV 235
Score = 113 bits (241), Expect(2) = 2e-035
Identities = 51/78 (65%), Positives = 53/78 (67%)
Frame = -2 / -2
Query: 1577 TTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMV 1398
TTAAS MLGW ATW PLY M SLS STMKISS SST P SPVCS PS SM+
Sbjct: 234 TTAASAMLGWVMSRASISAGATWRPLYFMISLSLSTMKISSSSSTKPTSPVCSQPSASML 55
Query: 1397 FAVASGLLRYPFINCLPL 1344
F VASGL R PF+ C PL
Sbjct: 54 FFVASGLFR*PFMICWPL 1
Score = 99.6 bits (211), Expect(2) = 4e-061
Identities = 38/72 (52%), Positives = 57/72 (79%)
Frame = +1 / +2
Query: 1567 AAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPS 1746
A V + + GEIPVAFV + GS ++ED++KQ+VAK+V++YK++ ++ F++ IPKAPS
Sbjct: 227 AVVGKQVEPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPS 406
Query: 1747 GKILRKDLRAKL 1782
GKILRK+LR +L
Sbjct: 407 GKILRKELRKQL 442
Score = 58.8 bits (122), Expect(2) = 2e-035
Identities = 33/73 (45%), Positives = 40/73 (54%)
Frame = -2 / -2
Query: 1772 LRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQE 1593
L S ILPDGALG+ S K + L* T AT CL SSS+ P T ATGISP
Sbjct: 432 LSSLRNILPDGALGILSMKITSRTFL**ITSLATNCLTSSSLSSLPLALATKATGISPIS 253
Query: 1592 SSFIWTTAASTML 1554
S + T A++ +
Sbjct: 252 GSTCFPTTAASAM 214
Score = 45.1 bits (92), Expect(2) = 6e-007
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -1 / -1
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAP 1345
+V+GVQP + VD + R +RVV+V FH LLAP
Sbjct: 94 DVAGVQPTVSVDAILRRIRVVQVTFHDLLAP 2
Score = 34.5 bits (69), Expect(2) = 6e-007
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -1 / -1
Query: 1752 LAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDLA 1600
LA W LGD ++E+ LV HL H L D++ G + RD +
Sbjct: 412 LARWGLGDLVNEDHFTDLLVVDHLLGHKLFDVIFTKLAPFGLGHKGDRDFS 260
Score = 30.9 bits (61), Expect(2) = 0.16
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3 / +1
Query: 1662 QAVRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKA 1781
Q + G+ G +LQE L PQG I QD +G++ A
Sbjct: 322 QTICGQGGDLLQEGP*SDLH*QDPQGPIGQDIAQGAKEAA 441
Score = 29.9 bits (59), Expect(2) = 0.16
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3 / +1
Query: 1344 QGQAVDERVPQQPGGNGEDHRLGGVAA 1424
QG A ER+P+QPG + E HR +AA
Sbjct: 1 QGPADHERLPEQPGCDEE*HRR*RLAA 81
>gb|BE359084.1|BE359084 DG1_38_H02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 384
Score = 235 bits (507), Expect = 2e-060
Identities = 97/124 (78%), Positives = 110/124 (88%)
Frame = +1 / +3
Query: 1420 LHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSC 1599
LHTGDIGYVDD DEIFIVDRLKE+IKYKG QV PAELEA+LI HP I DAAVV MKDD
Sbjct: 3 LHTGDIGYVDDDDEIFIVDRLKEIIKYKGLQVPPAELEALLITHPEIKDAAVVSMKDDLA 182
Query: 1600 GEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAK 1779
GEIPVAF+V + GS +TEDEIKQ+VAK+VVFYK++HK+FF E+IPK PSGKILRKDLRA+
Sbjct: 183 GEIPVAFIVRTEGSEVTEDEIKQFVAKEVVFYKKIHKVFFSESIPKNPSGKILRKDLRAR 362
Query: 1780 LASG 1791
LA+G
Sbjct: 363 LAAG 374
Score = 157 bits (337), Expect = 6e-037
Identities = 79/124 (63%), Positives = 82/124 (66%)
Frame = -2 / -3
Query: 1790 PDASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNAT 1611
P AS AL+SFL+ILPDG LGM S KK L L* TT AT CLISSSV EP T AT
Sbjct: 373 PAASLALKSFLRILPDGFLGMDSEKKTLWIFL*KTTSLATNCLISSSVTSEPSVRTMKAT 194
Query: 1610 GISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMS 1431
GISP SSFI TTAAS + G T NPLYLM SLS STMKISS SST PMS
Sbjct: 193 GISPARSSFIDTTAASLISGCVMRSASSSAGGTCNPLYLMISLSLSTMKISSSSST*PMS 14
Query: 1430 PVCS 1419
PVCS
Sbjct: 13 PVCS 2
Score = 82.6 bits (174), Expect(2) = 5e-017
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = -1 / -2
Query: 1773 SQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDLAAG 1594
SQ+LP*+LAG LGDG EE+LV LVE+HL LLDL+LGD A G HDE RD +
Sbjct: 356 SQVLP*DLAGRVLGDGFREENLVDLLVENHLLGDKLLDLILGDFRAFGPHDEGDRDFTSK 177
Query: 1593 VILH 1582
+ILH
Sbjct: 176 IILH 165
Score = 47.3 bits (97), Expect = 8e-004
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = -3 / -1
Query: 1780 ALLSDPSLKSCRMAPWGWPPRRRSCAASC 1694
A LS PSL SCR WGW RR+ C +SC
Sbjct: 363 AWLSSPSLGSCRTGSWGWIQRRKPCGSSC 277
Score = 42.8 bits (87), Expect(2) = 3e-004
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +3 / +2
Query: 1662 QAVRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKA 1781
QA+ + GG LQE Q L HPQ +RQD KEG ES+A
Sbjct: 245 QAICRQGGGFLQEDPQGFLL*IHPQEPVRQDPKEGLESQA 364
Score = 27.6 bits (54), Expect(2) = 5e-017
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -3 / -1
Query: 1534 PRAPPERLGTPCT**AP*A 1478
PRA P TPCT**+P*A
Sbjct: 117 PRARPAAPVTPCT**SP*A 61
Score = 26.7 bits (52), Expect(2) = 3e-004
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3 / +2
Query: 1479 AQGAHQVQGVPSRSGGA 1529
AQG HQVQGV +G A
Sbjct: 62 AQGDHQVQGVTGAAGRA 112
>gb|CW194292.1|CW194292 104_617_11180020_148_36790_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180020, DNA
sequence
Length = 721
Score = 138 bits (295), Expect(3) = 5e-059
Identities = 56/70 (80%), Positives = 61/70 (87%)
Frame = +1 / +2
Query: 1369 YLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIA 1548
YLN+ E+T TID +GWLHTGDIGYVDD DEIFIVDRLKE+IKYKGFQV PAELEA+LI
Sbjct: 2 YLNDLESTKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLIT 181
Query: 1549 HPSIVDAAVV 1578
HP I DAAVV
Sbjct: 182 HPEIKDAAVV 211
Score = 88.6 bits (187), Expect(3) = 5e-035
Identities = 43/69 (62%), Positives = 44/69 (63%)
Frame = -2 / -2
Query: 1577 TTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMV 1398
TTAAS + G TWNPLYLM SLS STMKISS SST PMSPVCS PS SMV
Sbjct: 210 TTAASLISGCVMRSASSSAGGTWNPLYLMISLSLSTMKISSSSST*PMSPVCSQPSLSMV 31
Query: 1397 FAVASGLLR 1371
F V S R
Sbjct: 30 FFVDSRSFR 4
Score = 75.3 bits (158), Expect(3) = 5e-059
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +1 / +2
Query: 1672 VAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLASG 1791
V QVVFYK++HK+FF E+IPK PSGKILRKDLRA+LA G
Sbjct: 575 VMLQVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLARG 694
Score = 62.9 bits (131), Expect(3) = 5e-059
Identities = 25/37 (67%), Positives = 32/37 (86%)
Frame = +1 / +2
Query: 1576 VQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQV 1686
++MKDD GEIPVAF+V + GS +TEDEIKQ+VAK+V
Sbjct: 305 LRMKDDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 415
Score = 57.9 bits (120), Expect(3) = 5e-035
Identities = 27/45 (60%), Positives = 30/45 (66%)
Frame = -2 / -2
Query: 1802 PLENPDASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATY 1668
P P AS AL+SFL+ILPDG LGM S KK L L* TTC T+
Sbjct: 705 PQ*TPRASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTCSITF 571
Score = 50.6 bits (104), Expect(2) = 1e-006
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = -1 / -1
Query: 1773 SQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDP 1642
SQ+LP*+LAG LGDG EE+LV LVE+HL ++ + DP
Sbjct: 676 SQVLP*DLAGRVLGDGFSEENLVDLLVENHLQHYIYIRFQSQDP 545
Score = 48.7 bits (100), Expect(3) = 5e-035
Identities = 23/35 (65%), Positives = 23/35 (65%)
Frame = -2 / -2
Query: 1685 TCFATYCLISSSVIPEPPDATTNATGISPQESSFI 1581
T AT CLISSSV EP T ATGISP SSFI
Sbjct: 414 TSLATNCLISSSVTSEPSVRTMKATGISPARSSFI 310
Score = 43.2 bits (88), Expect(4) = 1e-014
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / -3
Query: 1780 ALLSDPSLKSCRMAPWGWPPRRRSCAASC 1694
A LS PSL SCR WGW R+ C +SC
Sbjct: 683 AWLSSPSLGSCRTGSWGWIQ*RKPCGSSC 597
Score = 40.9 bits (83), Expect(4) = 1e-014
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = -1 / -1
Query: 1686 HLFRHVLLDLVLGDPGAAGRHDERHRDLAAGVILH 1582
+L LLDL+LGD A G HDE RD + +ILH
Sbjct: 415 YLLGDKLLDLILGDFRAFGPHDEGDRDFTSKIILH 311
Score = 40.5 bits (82), Expect(2) = 2e-004
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = +3 / +1
Query: 1683 GGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKA 1781
GG LQE Q L HPQ +RQD KEG ES+A
Sbjct: 586 GGFLQEDPQGFLH*IHPQEPVRQDPKEGLESQA 684
Score = 31.8 bits (63), Expect(4) = 1e-014
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -3 / -3
Query: 1534 PRAPPERLGTPCT**AP*A 1478
PRA P GTPCT**+P*A
Sbjct: 167 PRARPAAPGTPCT**SP*A 111
Score = 30.4 bits (60), Expect(2) = 2e-004
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 1479 AQGAHQVQGVPSRSGGA 1529
AQG HQVQGVP +G A
Sbjct: 112 AQGDHQVQGVPGAAGRA 162
Score = 28.1 bits (55), Expect(2) = 1e-006
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -1 / -1
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEV 1369
+V+GVQP + VDG+ L+VV+V
Sbjct: 70 DVAGVQPAVLVDGVLCRLKVVQV 2
Score = 28.1 bits (55), Expect(4) = 1e-014
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3 / -3
Query: 1441 TQCLRCAATPPSRWSS 1394
++C RCAA+ P RW S
Sbjct: 74 SRCRRCAASRPCRWCS 27
>gb|CW078695.1|CW078695 104_396_10898313_114_31923_153 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10898313, DNA
sequence
Length = 767
Score = 180 bits (387), Expect(2) = 2e-058
Identities = 68/112 (60%), Positives = 89/112 (79%)
Frame = +1 / +3
Query: 1240 KSGACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTIDSEGW 1419
K + G ++ N E+K +DP+TG SL +N PGEIC+R + +M+GY E T TID+ GW
Sbjct: 123 KKKSVGFILPNLEVKFVDPDTGRSLPKNTPGEICVRSQAVMQGYYRRKEETESTIDAAGW 302
Query: 1420 LHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAV 1575
LHTGD+GY+DD ++FIVDR+KELIKYKGFQVAPAELEA+L++HPS+ DAAV
Sbjct: 303 LHTGDVGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEAILLSHPSVEDAAV 458
Score = 101 bits (216), Expect(2) = 8e-030
Identities = 54/100 (54%), Positives = 59/100 (59%)
Frame = -2 / -2
Query: 1574 TAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVF 1395
TAAS+ G ATW PLYLMSSL RSTMK S SS YP SPV SHP+ SMV
Sbjct: 457 TAASSTDG*DRRMASSSAGATWKPLYLMSSLIRSTMKTSPSSSMYPTSPVWSHPAASMVL 278
Query: 1394 AVASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSS 1275
+V+S LL P I QISPG D PVSGS F+S
Sbjct: 277 SVSSFLL**PCITAWLRTQISPGVFLGSDRPVSGSTNFTS 158
Score = 69.3 bits (145), Expect(2) = 2e-058
Identities = 29/65 (44%), Positives = 45/65 (69%)
Frame = +1 / +2
Query: 1579 QMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKIL 1758
++ D+ GE+P + VV G+ +E ++ YVA++V YK+L + FV+AIPK+ SGKIL
Sbjct: 539 RLPDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKIL 718
Query: 1759 RKDLR 1773
R+ LR
Sbjct: 719 RRQLR 733
Score = 62.5 bits (130), Expect(2) = 1e-016
Identities = 34/82 (41%), Positives = 40/82 (48%)
Frame = -3 / -3
Query: 1537 WPRAPPERLGTPCT**AP*AGXXXXXXXXXXRTQCLRCAATPPSRWSSPLPPGC*GTLSS 1358
WP A G+PCT**AP*+G T+ RC ATP RW SP PP + +S
Sbjct: 420 WPPARQGPPGSPCT**AP*SGRR*RRRRRRRCTRRRRCGATPRRRWCSPSPPSSCSSPAS 241
Query: 1357 TACP*CKSPRAGCGGGTARSPG 1292
+SPRA TA PG
Sbjct: 240 RPGSARRSPRACSWAATAPCPG 175
Score = 51.5 bits (106), Expect(2) = 8e-030
Identities = 27/63 (42%), Positives = 36/63 (57%)
Frame = -2 / -3
Query: 1775 ALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQ 1596
+L +ILPD LGMAST + S L + T ATY ++S+S+ P TT+ G SP
Sbjct: 735 SLSCLRRILPDTDLGMASTNRSSRSFLYDATRSATYAIMSASLSGAPRRRTTHDAGTSPA 556
Query: 1595 ESS 1587
SS
Sbjct: 555 SSS 547
Score = 50.1 bits (103), Expect(2) = 1e-016
Identities = 25/61 (40%), Positives = 33/61 (54%)
Frame = -1 / -2
Query: 1782 QLCSQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDL 1603
++ ++ P +LAG RLGDG+HE + LV H RHV + L A H R RDL
Sbjct: 742 EVVPELPPQDLAGHRLGDGVHEPQQPELLVRRHALRHVRHHVRLALRRATTPHHARRRDL 563
Query: 1602 A 1600
A
Sbjct: 562 A 560
Score = 49.6 bits (102), Expect(2) = 2e-008
Identities = 25/56 (44%), Positives = 33/56 (58%)
Frame = -1 / -1
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGI 1270
+V+GV+PP VDG R L V H LAP A+LPG V + P +RV +L L +
Sbjct: 320 DVAGVEPPRGVDGALRLLLPPVVALHHGLAPHADLPGRVLGQRPPRVRVHELHLQV 153
Score = 42.3 bits (86), Expect(3) = 2e-010
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +3 / +2
Query: 1293 PGDRAVPPPQPARGDLHQGQAVDERVPQQPGGNGEDHRLGGVA 1421
PG AV + ARGDL D + Q+ GG+GE HR GVA
Sbjct: 176 PGHGAVAAQEHARGDLRAEPGRDAGLLQEEGGDGEHHRRRGVA 304
Score = 40.5 bits (82), Expect(3) = 2e-010
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3 / +1
Query: 1668 VRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESK 1778
VRG GV+QEA +RG HPQ +RQD E ++ +
Sbjct: 628 VRGGARGVVQEAPAAAVRGRHPQVGVRQDPAEAAQGR 738
Score = 35.0 bits (70), Expect(2) = 2e-008
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3 / -1
Query: 1762 SLKSCRMAPWGWPPRRRSCAASC 1694
S SCR WGW PR + ASC
Sbjct: 722 SAGSCRTPTWGWRPRTAAAGASC 654
Score = 28.6 bits (56), Expect(3) = 2e-010
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +2
Query: 1476 PAQGAHQVQGVP 1511
P QGAHQVQG+P
Sbjct: 359 PDQGAHQVQGLP 394
>gb|U23787.1|SBU23787 Sorghum bicolor 4-hydroxycinnamic acid: CoA ligase gene, partial cds
Length = 1157
Score = 138 bits (296), Expect(3) = 2e-057
Identities = 54/87 (62%), Positives = 73/87 (83%)
Frame = +1 / +1
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQLVDGDNPNLHFREDDVVLCVLPMFHVYSLHSIL 909
LP+SSGTTGLPKGV+L+H G V++VAQ VDG NPNL+ RE DV LCVLP+FH++SL+S+L
Sbjct: 763 LPFSSGTTGLPKGVVLTHGGQVSNVAQQVDGANPNLYMREGDVALCVLPLFHIFSLNSVL 942
Query: 910 LCGMRAGAALVIMKRFDTLRMFELVKR 990
LC +RAGAA+++M +F+ M E ++R
Sbjct: 943 LCALRAGAAVMLMPKFEMGAMLEGIQR 1023
Score = 101 bits (215), Expect(5) = 9e-044
Identities = 46/82 (56%), Positives = 53/82 (64%)
Frame = -2 / -1
Query: 977 SNMRRVSKRFMITSAAPARIPHSRMECSEYTWNMGSTQRTTSSSRKWRFGLSPSTSCATL 798
S++ +S + +AAPAR HS E SE WN GSTQ TS SR +RFG +PST CATL
Sbjct: 1010 SSIAPISNLGISITAAPARSAHSSTELSEKMWNSGSTQSATSPSRMYRFGFAPSTCCATL 831
Query: 797 VTSPRCDSITPLGSPVVPDEYG 732
T P S TPLG PVVPDE G
Sbjct: 830 DTCPPWVSTTPLGRPVVPDENG 765
Score = 84.0 bits (177), Expect(3) = 2e-057
Identities = 42/76 (55%), Positives = 48/76 (63%)
Frame = +1 / +1
Query: 340 RLSRRVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAK 519
RL R AA LGV G VM+LL NSVEF L FL S LGA AT ANP TP EI K
Sbjct: 346 RLLCRKAAASLHGLGVGHGDRVMILLQNSVEFVLTFLGASFLGAVATAANPFCTPLEIHK 525
Query: 520 QAAASGATVVITEPAF 567
Q ASGA +++T+ A+
Sbjct: 526 QFRASGAKLIVTQSAY 573
Score = 73.0 bits (153), Expect = 1e-011
Identities = 33/65 (50%), Positives = 37/65 (56%)
Frame = +1 / +1
Query: 175 PQAETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRR 354
P E TVFRS LPDI I HLPLH+Y R AE D CLI ATG T + L R+
Sbjct: 184 PAREETVFRSKLPDIDIASHLPLHEYCFARAAEVPDAPCLIAAATGRTYAVHETRLLCRK 363
Query: 355 VAAGM 369
AA +
Sbjct: 364 AAASL 378
Score = 66.1 bits (138), Expect(5) = 9e-044
Identities = 34/72 (47%), Positives = 39/72 (54%)
Frame = -2 / -1
Query: 554 VMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPRQ 375
V ++APEA CL IS GV +GLA VA APR + R S NSTEF +T P TP
Sbjct: 560 VTMSLAPEALNCLWISSGVQNGLAAVATAPRNDAPRKVSTNSTEFWSRIMTRSPWPTPSP 381
Query: 374 ARIPAATRRDRR 339
AA R R
Sbjct: 380 CSDAAALRHRSR 345
Score = 49.6 bits (102), Expect(3) = 2e-057
Identities = 18/34 (52%), Positives = 29/34 (85%)
Frame = +1 / +1
Query: 1021 PIAVEMVKSDAIDRHDLSSVRMVISGAAPMGKEL 1122
P+A+ + K+ A +++DLSS+R+ +SGAAP+GKEL
Sbjct: 1054 PLALALAKNPAPEKYDLSSIRIALSGAAPIGKEL 1155
Score = 49.6 bits (102), Expect(2) = 3e-008
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = -1 / -3
Query: 990 PLHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHGQH 868
PL L+H +E H H RRAG AQQ GV+R VE QH
Sbjct: 1023 PLDALQHRAHLELGHQHHRRAGTQRAQQHGVEREDVEQRQH 901
Score = 36.8 bits (74), Expect(5) = 9e-044
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -2 / -1
Query: 1121 SSLPMGAAPEMTMRTDERSWRSMASLLTISTAMG 1020
SSLP+GAAPE +R + RS+ S A L ++A G
Sbjct: 1154 SSLPIGAAPESAIRMELRSYFSGAGFLAKASASG 1053
Score = 30.9 bits (61), Expect(2) = 3e-008
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1 / -3
Query: 804 HAGYQPTVRQHHPLGQPRRA 745
H G+ P V +HH LGQ R A
Sbjct: 837 HVGHLPAVGEHHALGQARGA 778
Score = 24.9 bits (48), Expect(5) = 9e-044
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 221 AMSGSVERNTVVSACG 174
+MSGS +RNTV S G
Sbjct: 230 SMSGSFDRNTVSSRAG 183
Score = 24.4 bits (47), Expect(5) = 9e-044
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1 / -3
Query: 669 IVGGGSEVGERDAALCAVARGDDGDAGE 586
+VGG ++ E AA V DG+ GE
Sbjct: 717 VVGGRDQLPEGQAAFRGVGHVVDGEDGE 634
>gb|BZ629316.1|BZ629316 ih65e07.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih65e07 5', DNA sequence
Length = 668
Score = 173 bits (373), Expect(2) = 1e-056
Identities = 65/100 (65%), Positives = 83/100 (83%)
Frame = +1 / +2
Query: 1276 ELKIIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDG 1455
E+K +DP+TG SL +N PGEIC+R + +M+GY E T TID+ GWLHTGD+GY+DD
Sbjct: 2 EVKFVDPDTGRSLPKNTPGEICVRSQAVMQGYYRRKEETESTIDAAGWLHTGDVGYIDDD 181
Query: 1456 DEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAV 1575
++FIVDR+KELIKYKGFQVAPAELEA+L++HPS+ DAAV
Sbjct: 182 GDVFIVDRIKELIKYKGFQVAPAELEAILLSHPSVEDAAV 301
Score = 101 bits (216), Expect(2) = 8e-030
Identities = 54/100 (54%), Positives = 59/100 (59%)
Frame = -2 / -3
Query: 1574 TAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVF 1395
TAAS+ G ATW PLYLMSSL RSTMK S SS YP SPV SHP+ SMV
Sbjct: 300 TAASSTDG*DRRMASSSAGATWKPLYLMSSLIRSTMKTSPSSSMYPTSPVWSHPAASMVL 121
Query: 1394 AVASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSS 1275
+V+S LL P I QISPG D PVSGS F+S
Sbjct: 120 SVSSFLL**PCITAWLRTQISPGVFLGSDRPVSGSTNFTS 1
Score = 69.3 bits (145), Expect(2) = 1e-056
Identities = 29/65 (44%), Positives = 45/65 (69%)
Frame = +1 / +1
Query: 1579 QMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKIL 1758
++ D+ GE+P + VV G+ +E ++ YVA++V YK+L + FV+AIPK+ SGKIL
Sbjct: 382 RLPDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKIL 561
Query: 1759 RKDLR 1773
R+ LR
Sbjct: 562 RRQLR 576
Score = 62.5 bits (130), Expect(2) = 1e-016
Identities = 34/82 (41%), Positives = 40/82 (48%)
Frame = -3 / -1
Query: 1537 WPRAPPERLGTPCT**AP*AGXXXXXXXXXXRTQCLRCAATPPSRWSSPLPPGC*GTLSS 1358
WP A G+PCT**AP*+G T+ RC ATP RW SP PP + +S
Sbjct: 263 WPPARQGPPGSPCT**AP*SGRR*RRRRRRRCTRRRRCGATPRRRWCSPSPPSSCSSPAS 84
Query: 1357 TACP*CKSPRAGCGGGTARSPG 1292
+SPRA TA PG
Sbjct: 83 RPGSARRSPRACSWAATAPCPG 18
Score = 51.5 bits (106), Expect(2) = 8e-030
Identities = 27/63 (42%), Positives = 36/63 (57%)
Frame = -2 / -1
Query: 1775 ALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQ 1596
+L +ILPD LGMAST + S L + T ATY ++S+S+ P TT+ G SP
Sbjct: 578 SLSCLRRILPDTDLGMASTNRSSRSFLYDATRSATYAIMSASLSGAPRRRTTHDAGTSPA 399
Query: 1595 ESS 1587
SS
Sbjct: 398 SSS 390
Score = 50.1 bits (103), Expect(2) = 1e-016
Identities = 25/61 (40%), Positives = 33/61 (54%)
Frame = -1 / -3
Query: 1782 QLCSQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDL 1603
++ ++ P +LAG RLGDG+HE + LV H RHV + L A H R RDL
Sbjct: 585 EVVPELPPQDLAGHRLGDGVHEPQQPELLVRRHALRHVRHHVRLALRRATTPHHARRRDL 406
Query: 1602 A 1600
A
Sbjct: 405 A 403
Score = 49.2 bits (101), Expect(2) = 3e-008
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = -1 / -2
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL 1282
+V+GV+PP VDG R L V H LAP A+LPG V + P +RV +L
Sbjct: 163 DVAGVEPPRGVDGALRLLLPPVVALHHGLAPHADLPGRVLGQRPPRVRVHEL 8
Score = 42.3 bits (86), Expect(3) = 1e-010
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +3 / +1
Query: 1293 PGDRAVPPPQPARGDLHQGQAVDERVPQQPGGNGEDHRLGGVA 1421
PG AV + ARGDL D + Q+ GG+GE HR GVA
Sbjct: 19 PGHGAVAAQEHARGDLRAEPGRDAGLLQEEGGDGEHHRRRGVA 147
Score = 40.5 bits (82), Expect(3) = 1e-010
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3 / +3
Query: 1668 VRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESK 1778
VRG GV+QEA +RG HPQ +RQD E ++ +
Sbjct: 471 VRGGARGVVQEAPAAAVRGRHPQVGVRQDPAEAAQGR 581
Score = 35.0 bits (70), Expect(2) = 3e-008
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3 / -2
Query: 1762 SLKSCRMAPWGWPPRRRSCAASC 1694
S SCR WGW PR + ASC
Sbjct: 565 SAGSCRTPTWGWRPRTAAAGASC 497
Score = 28.6 bits (56), Expect(3) = 1e-010
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 1476 PAQGAHQVQGVP 1511
P QGAHQVQG+P
Sbjct: 202 PDQGAHQVQGLP 237
>gb|CX606247.1|CX606247 ANR1_2_A04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_2_A04_A002 3', mRNA sequence
Length = 632
Score = 161 bits (347), Expect(2) = 4e-050
Identities = 67/107 (62%), Positives = 80/107 (74%)
Frame = +1 / +3
Query: 1324 QPGEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYK 1503
+ GE+ IRG Q+M GY NNPEAT +TID++GWL TGDI Y D +IVDRLKELIK K
Sbjct: 87 ETGELYIRGPQVMAGYHNNPEATRETIDADGWLRTGDIAYYDREGYFYIVDRLKELIKTK 266
Query: 1504 GFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSG 1644
GFQVAPAELEA+L+ HP I DAAV+ D+ GE+P AFVVA +G
Sbjct: 267 GFQVAPAELEAILLTHPKIADAAVIPSPDERAGEVPKAFVVAKPNAG 407
Score = 59.7 bits (124), Expect(2) = 4e-050
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +1 / +3
Query: 1645 ITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAK 1779
+ E E+ +VA +V +KRLH + FVEAIPK SGKILR+DL+ +
Sbjct: 411 LAEAEVMDFVAGKVAHFKRLHFVEFVEAIPKTSSGKILRRDLKER 545
Score = 57.0 bits (118), Expect(2) = 3e-009
Identities = 29/67 (43%), Positives = 34/67 (50%)
Frame = -3 / -3
Query: 1534 PRAPPERLGTPCT**AP*AGXXXXXXXXXXRTQCLRCAATPPSRWSSPLPPGC*GTLSST 1355
P APP RL + +**AP* G QC CAAT RWS PPGC G+ S
Sbjct: 297 PPAPPVRLESLWS**AP*GGRRCKSSPRGRNRQCRPCAATRRRRWSRAWPPGCCGSRPSP 118
Query: 1354 ACP*CKS 1334
A C++
Sbjct: 117 AARGCRA 97
Score = 51.0 bits (105), Expect(3) = 2e-018
Identities = 28/54 (51%), Positives = 29/54 (53%)
Frame = -2 / -2
Query: 1628 ATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTM 1467
ATTNA G SP SS TAAS + G AT PL LMSSL RSTM
Sbjct: 391 ATTNALGTSPARSSGDGITAASAIFGCVSRIASSSAGAT*KPLVLMSSLRRSTM 230
Score = 47.3 bits (97), Expect(3) = 2e-018
Identities = 24/36 (66%), Positives = 24/36 (66%)
Frame = -2 / -2
Query: 1436 MSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
MSPV SHPS SMV VASGLL P I C P M SP
Sbjct: 199 MSPVRSHPSASMVSRVASGLLW*PAITCGPRM*SSP 92
Score = 41.8 bits (85), Expect(2) = 0.026
Identities = 22/48 (45%), Positives = 25/48 (52%)
Frame = -1 / -1
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLR 1294
NV+ QPP+ VDGL R LRVV V H L D L L + P R
Sbjct: 200 NVARAQPPVGVDGLARGLRVVVVAGHHLRPADVELARLHRPQQPPARR 57
Score = 40.0 bits (81), Expect(2) = 3e-005
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +3 / +2
Query: 1338 LHQGQAVDERVPQQPGGNGEDHRLGGVAA 1424
LH A D R+PQQPGG+ DHR VAA
Sbjct: 101 LHPRAAGDGRLPQQPGGHARDHRRRRVAA 187
Score = 34.1 bits (68), Expect(3) = 2e-018
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -1 / -1
Query: 1737 LGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAG 1630
L +GLH+ D V+PL HL RH + L LG+ + G
Sbjct: 503 LRNGLHKLDKVEPLEVRHLPRHEVHHLGLGEWASVG 396
Score = 30.4 bits (60), Expect(2) = 3e-005
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3 / +2
Query: 1476 PAQGAHQVQGVPSRSGGA 1529
P QGAHQ Q + SR+GGA
Sbjct: 239 PPQGAHQDQRLSSRTGGA 292
Score = 26.7 bits (52), Expect(2) = 3e-009
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = -2 / -2
Query: 1781 SFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSS 1650
S +LRS +ILP GMAST S L T AT + S+S
Sbjct: 547 SRSLRSRRRILPLLVFGMASTNSTKWSRLKCATFPATKSITSAS 416
Score = 21.7 bits (41), Expect(2) = 0.026
Identities = 5/6 (83%), Positives = 5/6 (83%)
Frame = -3 / -3
Query: 1735 WGWPPR 1718
W WPPR
Sbjct: 399 WAWPPR 382
>gb|BI211898.1|BI211898 IP1_62_G05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 679
Score = 197 bits (424), Expect = 6e-049
Identities = 79/139 (56%), Positives = 106/139 (76%)
Frame = +1 / +1
Query: 1357 LMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEA 1536
+M+GY E T TID+ GWLHTGD+GY+DD ++FIVDR+KELIKYKGFQVAPAELEA
Sbjct: 10 VMQGYYRRKEETESTIDAAGWLHTGDVGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEA 189
Query: 1537 MLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIF 1716
+L++HPS+ DAAV + D+ GE+P + VV G+ +E ++ YVA++V YK+L +
Sbjct: 190 ILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLR 369
Query: 1717 FVEAIPKAPSGKILRKDLR 1773
FV+AIPK+ SGKILR+ LR
Sbjct: 370 FVDAIPKSVSGKILRRQLR 426
Score = 124 bits (265), Expect = 5e-027
Identities = 68/139 (48%), Positives = 81/139 (58%)
Frame = -2 / -3
Query: 1775 ALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQ 1596
+L +ILPD LGMAST + S L + T ATY ++S+S+ P TT+ G SP
Sbjct: 428 SLSCLRRILPDTDLGMASTNRSSRSFLYDATRSATYAIMSASLSGAPRRRTTHDAGTSPA 249
Query: 1595 ESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSH 1416
SS TAAS+ G ATW PLYLMSSL RSTMK S SS YP SPV SH
Sbjct: 248 SSSGSPKTAASSTDG*DRRMASSSAGATWKPLYLMSSLIRSTMKTSPSSSMYPTSPVWSH 69
Query: 1415 PSESMVFAVASGLLRYPFI 1359
P+ SMV +V+S LL P I
Sbjct: 68 PAASMVLSVSSFLL**PCI 12
Score = 53.3 bits (110), Expect(2) = 5e-015
Identities = 25/52 (48%), Positives = 28/52 (53%)
Frame = -3 / -1
Query: 1537 WPRAPPERLGTPCT**AP*AGXXXXXXXXXXRTQCLRCAATPPSRWSSPLPP 1382
WP A G+PCT**AP*+G T+ RC ATP RW SP PP
Sbjct: 190 WPPARQGPPGSPCT**AP*SGRR*RRRRRRRCTRRRRCGATPRRRWCSPSPP 35
Score = 50.1 bits (103), Expect(2) = 5e-015
Identities = 25/61 (40%), Positives = 33/61 (54%)
Frame = -1 / -2
Query: 1782 QLCSQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDL 1603
++ ++ P +LAG RLGDG+HE + LV H RHV + L A H R RDL
Sbjct: 435 EVVPELPPQDLAGHRLGDGVHEPQQPELLVRRHALRHVRHHVRLALRRATTPHHARRRDL 256
Query: 1602 A 1600
A
Sbjct: 255 A 253
Score = 40.5 bits (82), Expect(3) = 3e-006
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3 / +3
Query: 1668 VRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESK 1778
VRG GV+QEA +RG HPQ +RQD E ++ +
Sbjct: 321 VRGGARGVVQEAPAAAVRGRHPQVGVRQDPAEAAQGR 431
Score = 35.0 bits (70), Expect(2) = 0.028
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3 / -1
Query: 1762 SLKSCRMAPWGWPPRRRSCAASC 1694
S SCR WGW PR + ASC
Sbjct: 415 SAGSCRTPTWGWRPRTAAAGASC 347
Score = 28.6 bits (56), Expect(2) = 0.028
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1 / -2
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLA 1348
+V+GV+PP VDG R L V H LA
Sbjct: 90 DVAGVEPPRGVDGALRLLLPPVVALHHGLA 1
Score = 28.6 bits (56), Expect(3) = 3e-006
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 1476 PAQGAHQVQGVP 1511
P QGAHQVQG+P
Sbjct: 129 PDQGAHQVQGLP 164
Score = 27.2 bits (53), Expect(3) = 3e-006
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3 / +3
Query: 1359 DERVPQQPGGNGEDHRLGGVA 1421
D + Q+ GG+GE HR GVA
Sbjct: 12 DAGLLQEEGGDGEHHRRRGVA 74
>gb|CD232716.1|CD232716 SS1_1_H12.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_1_H12_A012 3', mRNA sequence
Length = 559
Score = 194 bits (418), Expect = 4e-048
Identities = 80/106 (75%), Positives = 93/106 (87%)
Frame = +1 / +2
Query: 1474 DRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITE 1653
DRLKE+IKYKGFQV PAELEA+LI HP I DAAVV MKDD GEIPVAF+V + GS +TE
Sbjct: 2 DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTE 181
Query: 1654 DEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLASG 1791
EIKQ+VAK+VVFYK++HK+FF E+IPK PSGKILRKDLRA+LA+G
Sbjct: 182 GEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAG 319
Score = 127 bits (272), Expect = 6e-028
Identities = 64/110 (58%), Positives = 67/110 (60%)
Frame = -2 / -2
Query: 1802 PLENPDASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDAT 1623
P P AS AL+SFL+ILPDG LGM S KK L L* TT AT CLIS SV EP T
Sbjct: 330 PQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISPSVTSEPSVRT 151
Query: 1622 TNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRS 1473
ATGISP SSFI TTAAS + G TWNPLYLM SLS S
Sbjct: 150 MKATGISPARSSFIDTTAASLISGCVMRSASSSAGGTWNPLYLMISLSLS 1
Score = 78.5 bits (165), Expect(2) = 5e-017
Identities = 37/64 (57%), Positives = 44/64 (68%)
Frame = -1 / -1
Query: 1773 SQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDLAAG 1594
SQ+LP*+LAG LGDG EE+LV LVE+HL LLDL LGD A G HDE R+ +
Sbjct: 301 SQVLP*DLAGRVLGDGFSEENLVDLLVENHLLGDKLLDLTLGDFRAFGPHDEGDRNFTSK 122
Query: 1593 VILH 1582
+ILH
Sbjct: 121 IILH 110
Score = 43.7 bits (89), Expect(2) = 2e-005
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +3 / +1
Query: 1662 QAVRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKA 1781
QA+ + GG LQE Q L HPQ +RQD KEG ES+A
Sbjct: 190 QAICRQGGGFLQEDPQGFLH*IHPQEPVRQDPKEGLESQA 309
Score = 43.2 bits (88), Expect = 0.014
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / -3
Query: 1780 ALLSDPSLKSCRMAPWGWPPRRRSCAASC 1694
A LS PSL SCR WGW R+ C +SC
Sbjct: 308 AWLSSPSLGSCRTGSWGWIQ*RKPCGSSC 222
Score = 31.8 bits (63), Expect(2) = 5e-017
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -3 / -3
Query: 1534 PRAPPERLGTPCT**AP*A 1478
PRA P GTPCT**+P*A
Sbjct: 62 PRARPAAPGTPCT**SP*A 6
Score = 30.4 bits (60), Expect(2) = 2e-005
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 1479 AQGAHQVQGVPSRSGGA 1529
AQG HQVQGVP +G A
Sbjct: 7 AQGDHQVQGVPGAAGRA 57
>gb|CF429879.1|CF429879 PH1_25_E11.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_E11_A002 3', mRNA sequence
Length = 591
Score = 194 bits (418), Expect = 4e-048
Identities = 80/104 (76%), Positives = 92/104 (88%)
Frame = +1 / +2
Query: 1474 DRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITE 1653
DRLKE+IKYKGFQV PAELEA+LI HP I DAAVV MKDD GEIPVAF+V + GS +TE
Sbjct: 2 DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTE 181
Query: 1654 DEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLA 1785
DEIKQ+VAK+VVFYK++HK+FF E+IPK PSGKILRKDLRA+LA
Sbjct: 182 DEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLA 313
Score = 128 bits (274), Expect = 3e-028
Identities = 64/108 (59%), Positives = 68/108 (62%)
Frame = -2 / -1
Query: 1796 ENPDASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTN 1617
E+ AS AL+SFL+ILPDG LGM S KK L L* TT AT CLISSSV EP T
Sbjct: 324 EHRXASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVTSEPSVRTMK 145
Query: 1616 ATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRS 1473
ATGISP SSFI TTAAS + G TWNPLYLM SLS S
Sbjct: 144 ATGISPARSSFIDTTAASLISGCVMRSASSSAGGTWNPLYLMISLSLS 1
Score = 82.2 bits (173), Expect(2) = 4e-018
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = -1 / -3
Query: 1773 SQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDLAAG 1594
SQ+LP*+LAG LGDG EE+LV LVE+HL LLDL+LGD A G HDE RD +
Sbjct: 301 SQVLP*DLAGRVLGDGFSEENLVDLLVENHLLGDKLLDLILGDFRAFGPHDEGDRDFTSK 122
Query: 1593 VILH 1582
+ILH
Sbjct: 121 IILH 110
Score = 43.7 bits (89), Expect(2) = 2e-005
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +3 / +1
Query: 1662 QAVRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKA 1781
QA+ + GG LQE Q L HPQ +RQD KEG ES+A
Sbjct: 190 QAICRQGGGFLQEDPQGFLH*IHPQEPVRQDPKEGLESQA 309
Score = 43.2 bits (88), Expect = 0.014
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / -2
Query: 1780 ALLSDPSLKSCRMAPWGWPPRRRSCAASC 1694
A LS PSL SCR WGW R+ C +SC
Sbjct: 308 AWLSSPSLGSCRTGSWGWIQ*RKPCGSSC 222
Score = 31.8 bits (63), Expect(2) = 4e-018
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -3 / -2
Query: 1534 PRAPPERLGTPCT**AP*A 1478
PRA P GTPCT**+P*A
Sbjct: 62 PRARPAAPGTPCT**SP*A 6
Score = 30.4 bits (60), Expect(2) = 2e-005
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 1479 AQGAHQVQGVPSRSGGA 1529
AQG HQVQGVP +G A
Sbjct: 7 AQGDHQVQGVPGAAGRA 57
>gb|CN127673.1|CN127673 RHOH1_24_H12.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_24_H12_A002 3', mRNA sequence
Length = 759
Score = 193 bits (417), Expect = 6e-048
Identities = 79/143 (55%), Positives = 102/143 (71%)
Frame = +1 / +2
Query: 1342 IRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAP 1521
IRG +MKGY N EAT T+ +GWL TGD+ Y+D+ +F+VDRLKELIKYKG+QV P
Sbjct: 2 IRGPYVMKGYFKNTEATQSTLTPDGWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQVPP 181
Query: 1522 AELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKR 1701
AELEA+L+ H I D AV+ D G+ P+A+VV GS ++E E+ ++VAKQV YK+
Sbjct: 182 AELEALLLTHSEIQDVAVIPFPDREVGQFPMAYVVRKKGSNLSEREVMEFVAKQVAPYKK 361
Query: 1702 LHKIFFVEAIPKAPSGKILRKDL 1770
+ K+ FV IPK SGKILRKDL
Sbjct: 362 VRKVAFVTEIPKNASGKILRKDL 430
Score = 91.3 bits (193), Expect = 5e-017
Identities = 58/147 (39%), Positives = 69/147 (46%)
Frame = -2 / -1
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATG 1608
D + +RSFL ILPD LG++ T + L* TC AT + S S P TT A G
Sbjct: 447 DVASLMRSFLSILPDAFLGISVTNATFLTFL*GATCLATNSITSRSDKLLPFFLTT*AIG 268
Query: 1607 ISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSP 1428
P S TA S + T PLYL++S RST K SS SP
Sbjct: 267 NWPTSRSGNGITATSWISECVSKRASNSAGGT*YPLYLINSFRRSTTKRYPSSSM*QRSP 88
Query: 1427 VCSHPSESMVFAVASGLLRYPFINCLP 1347
V SHPS V VAS L+YPF+ P
Sbjct: 87 VLSHPSGVNVDCVASVFLKYPFMTYGP 7
Score = 34.1 bits (68), Expect(2) = 0.004
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1 / -3
Query: 1434 VSGVQPPLRVDGLRRCLRVVEVPFHQLLAPD 1342
+ ++P +R CLRV+E+PFH + PD
Sbjct: 94 IPSLEPSIRCQC*LCCLRVLEIPFHDVWPPD 2
Score = 32.7 bits (65), Expect(2) = 0.004
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -1 / -3
Query: 1770 QILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDLA 1600
+ILP LAG LG+ H+ L L+ +LF H L L L H H +LA
Sbjct: 430 EILPQYLAGRVLGNFCHKRHLSNLLIRRYLFGHKLHHLAL*QIAPLLPHYVGHWELA 260
>gb|CN134916.1|CN134916 OX1_29_H04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_29_H04_A002 3', mRNA sequence
Length = 737
Score = 192 bits (413), Expect = 2e-047
Identities = 75/138 (54%), Positives = 107/138 (77%)
Frame = +1 / +1
Query: 1357 LMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEA 1536
+MKGY+ + EATA T+DSEGWL TGD+ Y ++ ++IVDRLKELIKYKG+QV PAEL
Sbjct: 7 VMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQVPPAELGH 186
Query: 1537 MLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIF 1716
+L +HP I+DAAV+ D+ G++P+AF+V GS +T+ ++ +VAKQV YK++ ++
Sbjct: 187 ILNSHPDIMDAAVIPYPDEDVGQLPMAFIVRKPGSNLTKQQVMDFVAKQVAPYKKVRRVA 366
Query: 1717 FVEAIPKAPSGKILRKDL 1770
FV AIPK+P+GKILR++L
Sbjct: 367 FVSAIPKSPAGKILRREL 420
Score = 79.9 bits (168), Expect = 1e-013
Identities = 54/143 (37%), Positives = 66/143 (46%)
Frame = -2 / -1
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATG 1608
D + + S KI P G LG+A TK + L TC AT + V EP T A G
Sbjct: 437 DTACSTSSRRKIFPAGDLGIAETKATRRTFLYGATCLATKSMTCCLVRFEPGFLTIKAIG 258
Query: 1607 ISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSP 1428
P SS TAAS + G T PLY ++S +RSTM + S SP
Sbjct: 257 SCPTSSSGYGITAASMISG*EFRICPSSAGGT*YPLYFINSFNRSTM*RNPSSLK*HRSP 78
Query: 1427 VCSHPSESMVFAVASGLLRYPFI 1359
V + PSES V AVAS PF+
Sbjct: 77 VFNQPSESTVAAVASSSPT*PFM 9
>gb|CW361238.1|CW361238 fsbb001f029k23k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f029k23, DNA
sequence
Length = 594
Score = 177 bits (380), Expect(2) = 2e-044
Identities = 74/80 (92%), Positives = 77/80 (96%)
Frame = +1 / -2
Query: 1579 QMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKIL 1758
+MKDDSCGEIPVAFVV SGG +TEDEIKQYVAKQVVFYKRLHK+FFVEAIPKAPSGKIL
Sbjct: 449 RMKDDSCGEIPVAFVVTSGGYEMTEDEIKQYVAKQVVFYKRLHKVFFVEAIPKAPSGKIL 270
Query: 1759 RKDLRAKLASGFSNGSSC*C 1818
RKDLRAKLASGFSNGSSC*C
Sbjct: 269 RKDLRAKLASGFSNGSSC*C 210
Score = 174 bits (374), Expect(4) = 5e-046
Identities = 73/79 (92%), Positives = 75/79 (94%)
Frame = -2 / +1
Query: 1817 HQHDDPLENPDASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPE 1638
HQHDDPLENPDASFALRSFL+ILPDGALG+ASTKK LCSLL*NTTCFATYCLISSSVI
Sbjct: 211 HQHDDPLENPDASFALRSFLRILPDGALGIASTKKTLCSLL*NTTCFATYCLISSSVIS* 390
Query: 1637 PPDATTNATGISPQESSFI 1581
PPD TTNATGISPQESSFI
Sbjct: 391 PPDVTTNATGISPQESSFI 447
Score = 158 bits (339), Expect(2) = 7e-038
Identities = 67/79 (84%), Positives = 70/79 (88%)
Frame = -1 / +3
Query: 1818 ASTR*PVGESRRQLCSQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPG 1639
ASTR* +G+SRR LCSQILP NLA WRLGD LHEEDLVQPLVEHHLFRHVL DLVLG
Sbjct: 210 ASTR*SIGKSRR*LCSQILPQNLARWRLGDSLHEEDLVQPLVEHHLFRHVLFDLVLGHLV 389
Query: 1638 AAGRHDERHRDLAAGVILH 1582
AAGRHDERHRDLAAGV+LH
Sbjct: 390 AAGRHDERHRDLAAGVVLH 446
Score = 97.3 bits (206), Expect = 7e-019
Identities = 42/52 (80%), Positives = 45/52 (86%)
Frame = +3 / -1
Query: 1662 QAVRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKAGVWILQRVIVLM 1817
Q VRGETGGVLQEAAQ LLRGG+PQGAI QD +EGSESKA VWI Q +IVLM
Sbjct: 366 QTVRGETGGVLQEAAQGLLRGGYPQGAIWQDSEEGSESKASVWIFQWIIVLM 211
Score = 83.5 bits (176), Expect = 1e-014
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -3 / +2
Query: 1816 INTMTRWRIQTPALLSDPSLKSCRMAPWGWPPRRRSCAASC 1694
INTM W+IQT ALLSDPS +SC+MAPWG PPRRR CAASC
Sbjct: 212 INTMIHWKIQTLALLSDPSSESCQMAPWG*PPRRRPCAASC 334
Score = 50.1 bits (103), Expect(2) = 1e-004
Identities = 24/40 (60%), Positives = 24/40 (60%)
Frame = +2 / -3
Query: 1700 GCTXXXXXXXXXXXHPARF*GRI*EQSWRLDSPTGHRVDA 1819
GCT H ARF*GRI*EQS RLD P HRVDA
Sbjct: 328 GCTRSSSWRLSPRRHLARF*GRI*EQS*RLDFPMDHRVDA 209
Score = 25.4 bits (49), Expect(2) = 2e-044
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -3
Query: 1546 AHPSIVDAAVV 1578
AHPSI DAAVV
Sbjct: 592 AHPSIADAAVV 560
Score = 24.9 bits (48), Expect(4) = 5e-046
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / +3
Query: 1577 TTAASTMLGW 1548
TTAAS MLGW
Sbjct: 561 TTAASAMLGW 590
Score = 22.6 bits (43), Expect(4) = 5e-046
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1 / +1
Query: 1926 DCFLFTPF 1903
DCF FTPF
Sbjct: 88 DCFSFTPF 111
Score = 22.1 bits (42), Expect(4) = 5e-046
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / +1
Query: 1904 FLYIYLF*LVQHK 1866
F +LF*LVQHK
Sbjct: 112 FCISFLF*LVQHK 150
Score = 22.1 bits (42), Expect(2) = 7e-038
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / +3
Query: 1927 *LLLVYTVFCIYIF 1886
*LLLVYTVF F
Sbjct: 87 *LLLVYTVFLYIFF 128
Score = 21.7 bits (41), Expect(2) = 1e-004
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1 / -2
Query: 1885 KRYIYRKRCKQEAVNHVQDML 1947
K+ I + ++ NHVQD+L
Sbjct: 128 KKDIQKNGVNEKQSNHVQDLL 66
>gb|CW493569.1|CW493569 fsbb001f284g08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f284g08, DNA
sequence
Length = 724
Score = 103 bits (219), Expect(3) = 1e-045
Identities = 43/50 (86%), Positives = 45/50 (90%)
Frame = +1 / -2
Query: 1429 GDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVV 1578
GDIGYVDD DEIFIVDRLKE+IKYKGFQV PAELEA+LI HP I DAAVV
Sbjct: 723 GDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 574
Score = 69.3 bits (145), Expect(3) = 1e-045
Identities = 26/42 (61%), Positives = 36/42 (85%)
Frame = +1 / -2
Query: 1684 VVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLASGFSNGSS 1809
VVFYKR++++FF ++IPK PSGKILRKDLRA+LA+G + +
Sbjct: 135 VVFYKRINRVFFTDSIPKNPSGKILRKDLRARLAAGIPSSDN 10
Score = 58.8 bits (122), Expect(3) = 2e-024
Identities = 28/50 (56%), Positives = 30/50 (60%)
Frame = -2 / +2
Query: 1577 TTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSP 1428
TTAAS + G TW PLYL+ SLS STM ISS SST PMSP
Sbjct: 575 TTAASLISGCVMRRASSSAGGTWKPLYLIISLSLSTMNISSSSST*PMSP 724
Score = 58.8 bits (122), Expect(3) = 1e-045
Identities = 22/37 (59%), Positives = 32/37 (86%)
Frame = +1 / -1
Query: 1579 QMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVV 1689
+MKD+ GE+PVAF++ S GS I+E+EIKQ+VAK+V+
Sbjct: 469 RMKDELAGEVPVAFIIRSEGSEISENEIKQFVAKEVI 359
Score = 53.8 bits (111), Expect(3) = 2e-024
Identities = 26/44 (59%), Positives = 30/44 (68%)
Frame = -2 / +2
Query: 1790 PDASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLI 1659
P AS ALRSFL+ILP+G GM S KK L LL*NTT + +I
Sbjct: 29 PAASRALRSFLRILPEGFFGMESVKKTLLILL*NTTYYIVETVI 160
Score = 46.9 bits (96), Expect(3) = 2e-024
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -2 / +3
Query: 1685 TCFATYCLISSSVIPEPPDATTNATGISPQESSFI 1581
T FAT CLIS S+I EP NATG SP SSFI
Sbjct: 363 TSFATNCLISFSLISEPSLRIMNATGTSPASSSFI 467
Score = 43.7 bits (89), Expect(2) = 3e-004
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -1 / +1
Query: 1773 SQILP*NLAGWRLGDGLHEEDLVQPLVEHHL 1681
SQ+LP NLAG L +G+ EE+ V PLVEH L
Sbjct: 46 SQVLPKNLAGGILRNGIREENSVDPLVEHDL 138
Score = 36.3 bits (73), Expect(2) = 0.055
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +3 / -1
Query: 1683 GGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKA 1781
G VLQE Q L G H + ++RQD EG ES A
Sbjct: 136 GRVLQEDQQSFLHGFHSEESLRQDS*EGPESAA 38
Score = 26.7 bits (52), Expect(2) = 3e-004
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3 / +3
Query: 1534 PRAPPERLGTPCT**AP*A 1478
P+ P E LG+PC * +P*A
Sbjct: 618 PQVPQEVLGSPCI*LSP*A 674
Score = 26.3 bits (51), Expect(2) = 0.055
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3 / -1
Query: 1479 AQGAHQVQGVPSRSGG 1526
AQG +Q+QG+PS S G
Sbjct: 673 AQGDNQIQGLPSTSCG 626
>gb|CL190993.1|CL190993 104_409_10906471_114_32488_022 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10906471, DNA
sequence
Length = 759
Score = 146 bits (314), Expect(2) = 2e-045
Identities = 59/71 (83%), Positives = 63/71 (88%)
Frame = +1 / -3
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLI 1545
GYLN+PEAT TID +GWLHTGDIGYVDD DEIFIVDRLKE+IKYKGFQV PAELEA+LI
Sbjct: 568 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 389
Query: 1546 AHPSIVDAAVV 1578
HP I DAAVV
Sbjct: 388 THPEIKDAAVV 356
Score = 92.7 bits (196), Expect(2) = 1e-025
Identities = 44/71 (61%), Positives = 46/71 (64%)
Frame = -2 / +3
Query: 1577 TTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMV 1398
TTAAS + G TW PLYL+ SLS STM ISS SST PMSPVCSHPS SMV
Sbjct: 357 TTAASLISGCVMRRASSSAGGTWKPLYLIISLSLSTMNISSSSST*PMSPVCSHPSLSMV 536
Query: 1397 FAVASGLLRYP 1365
F VASG R P
Sbjct: 537 FFVASGSFR*P 569
Score = 58.8 bits (122), Expect(2) = 2e-045
Identities = 22/37 (59%), Positives = 32/37 (86%)
Frame = +1 / -2
Query: 1579 QMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVV 1689
+MKD+ GE+PVAF++ S GS I+E+EIKQ+VAK+V+
Sbjct: 251 RMKDELAGEVPVAFIIRSEGSEISENEIKQFVAKEVI 141
Score = 46.9 bits (96), Expect(2) = 1e-025
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -2 / +1
Query: 1685 TCFATYCLISSSVIPEPPDATTNATGISPQESSFI 1581
T FAT CLIS S+I EP NATG SP SSFI
Sbjct: 145 TSFATNCLISFSLISEPSLRIMNATGTSPASSSFI 249
>gb|CW331181.1|CW331181 104_828_11480770_148_36025_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480770, DNA
sequence
Length = 694
Score = 146 bits (314), Expect(2) = 2e-045
Identities = 59/71 (83%), Positives = 63/71 (88%)
Frame = +1 / +3
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLI 1545
GYLN+PEAT TID +GWLHTGDIGYVDD DEIFIVDRLKE+IKYKGFQV PAELEA+LI
Sbjct: 111 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 290
Query: 1546 AHPSIVDAAVV 1578
HP I DAAVV
Sbjct: 291 THPEIKDAAVV 323
Score = 92.7 bits (196), Expect(2) = 1e-025
Identities = 44/71 (61%), Positives = 46/71 (64%)
Frame = -2 / -1
Query: 1577 TTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMV 1398
TTAAS + G TW PLYL+ SLS STM ISS SST PMSPVCSHPS SMV
Sbjct: 322 TTAASLISGCVMRRASSSAGGTWKPLYLIISLSLSTMNISSSSST*PMSPVCSHPSLSMV 143
Query: 1397 FAVASGLLRYP 1365
F VASG R P
Sbjct: 142 FFVASGSFR*P 110
Score = 58.8 bits (122), Expect(2) = 2e-045
Identities = 22/37 (59%), Positives = 32/37 (86%)
Frame = +1 / +2
Query: 1579 QMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVV 1689
+MKD+ GE+PVAF++ S GS I+E+EIKQ+VAK+V+
Sbjct: 428 RMKDELAGEVPVAFIIRSEGSEISENEIKQFVAKEVI 538
Score = 46.9 bits (96), Expect(2) = 1e-025
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -2 / -2
Query: 1685 TCFATYCLISSSVIPEPPDATTNATGISPQESSFI 1581
T FAT CLIS S+I EP NATG SP SSFI
Sbjct: 534 TSFATNCLISFSLISEPSLRIMNATGTSPASSSFI 430
>gb|CW134050.1|CW134050 104_518_11117099_148_34816_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117099, DNA
sequence
Length = 664
Score = 140 bits (301), Expect(2) = 8e-045
Identities = 57/71 (80%), Positives = 62/71 (87%)
Frame = +1 / -1
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLI 1545
GYLN+ E+T TID +GWLHTGDIGYVDD DEIFIVDRLKE+IKYKGFQV PAELEA+LI
Sbjct: 544 GYLNDLESTKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 365
Query: 1546 AHPSIVDAAVV 1578
HP I DAAVV
Sbjct: 364 THPEIKDAAVV 332
Score = 90.0 bits (190), Expect(2) = 2e-025
Identities = 44/71 (61%), Positives = 45/71 (63%)
Frame = -2 / +3
Query: 1577 TTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMV 1398
TTAAS + G TWNPLYLM SLS STMKISS SST PMSPVCS PS SMV
Sbjct: 333 TTAASLISGCVMRSASSSAGGTWNPLYLMISLSLSTMKISSSSST*PMSPVCSQPSLSMV 512
Query: 1397 FAVASGLLRYP 1365
F V S R P
Sbjct: 513 FFVDSRSFR*P 545
Score = 62.9 bits (131), Expect(2) = 8e-045
Identities = 25/37 (67%), Positives = 32/37 (86%)
Frame = +1 / -1
Query: 1576 VQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQV 1686
++MKDD GEIPVAF+V + GS +TEDEIKQ+VAK+V
Sbjct: 238 LRMKDDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 128
Score = 48.7 bits (100), Expect(2) = 2e-025
Identities = 23/35 (65%), Positives = 23/35 (65%)
Frame = -2 / +3
Query: 1685 TCFATYCLISSSVIPEPPDATTNATGISPQESSFI 1581
T AT CLISSSV EP T ATGISP SSFI
Sbjct: 129 TSLATNCLISSSVTSEPSVRTMKATGISPARSSFI 233
Score = 40.9 bits (83), Expect(3) = 6e-008
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = -1 / +2
Query: 1686 HLFRHVLLDLVLGDPGAAGRHDERHRDLAAGVILH 1582
+L LLDL+LGD A G HDE RD + +ILH
Sbjct: 128 YLLGDKLLDLILGDFRAFGPHDEGDRDFTSKIILH 232
Score = 31.8 bits (63), Expect(3) = 6e-008
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -3 / +1
Query: 1534 PRAPPERLGTPCT**AP*A 1478
PRA P GTPCT**+P*A
Sbjct: 376 PRARPAAPGTPCT**SP*A 432
Score = 29.5 bits (58), Expect(3) = 6e-008
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3 / +1
Query: 1441 TQCLRCAATPPSRWSSPLPPGC*GTLS 1361
++C RCAA+ P RW S G G L+
Sbjct: 469 SRCRRCAASRPCRWCSLSTQGRSGNLN 549
>gb|BE362940.2|BE362940 DG1_91_B11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 440
Score = 182 bits (392), Expect = 2e-044
Identities = 68/126 (53%), Positives = 100/126 (79%)
Frame = +1 / +1
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKD 1590
+GWLHTGD+GY D+ ++ +VDRLKELIKYKGFQ+APAELE +L++HP I+DAAV+ D
Sbjct: 34 QGWLHTGDLGYFDERGQLHVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAAVIPYPD 213
Query: 1591 DSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDL 1770
GE+P+A+VV S S + E ++++++ KQV YKRL K+ FV+++PK+ +GKILR++L
Sbjct: 214 PEAGEVPIAYVVRSPKSSLAEVDVQKFIEKQVAHYKRLRKVKFVDSVPKSAAGKILRREL 393
Query: 1771 RAKLAS 1788
A++ S
Sbjct: 394 IAQVRS 411
Score = 94.1 bits (199), Expect = 7e-018
Identities = 54/125 (43%), Positives = 62/125 (49%)
Frame = -2 / -1
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATG 1608
D ++A+ S LKI P G ST SLL* TCF+ S+S D TT A G
Sbjct: 410 DLTWAMSSLLKIFPAADFGTLSTNFTFLSLL*CATCFSINFWTSTSASELFGDRTT*AIG 231
Query: 1607 ISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSP 1428
SP S TAAS + G A W PLYL+SSLS ST SS YP SP
Sbjct: 230 TSPASGSGYGITAASRISG*DKSNPSSSAGAIWKPLYLISSLSLSTT*SWPLSSKYPRSP 51
Query: 1427 VCSHP 1413
VC+HP
Sbjct: 50 VCNHP 36
>gb|CW362994.1|CW362994 fsbb001f034f02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f034f02, DNA
sequence
Length = 687
Score = 178 bits (384), Expect = 2e-043
Identities = 66/112 (58%), Positives = 90/112 (80%)
Frame = +1 / -1
Query: 1240 KSGACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTIDSEGW 1419
K + G ++ N E+K +DP+TG SL +N GEIC+R + +M+GY E T +TID++GW
Sbjct: 459 KKNSVGFILPNLEVKFVDPDTGRSLPKNTAGEICVRSQAVMQGYYRKKEETERTIDAKGW 280
Query: 1420 LHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAV 1575
LHTGD+GY+DD ++F+VDR+KELIKYKGFQVAPAELEA+L++HPS+ DAAV
Sbjct: 279 LHTGDVGYIDDDGDVFVVDRIKELIKYKGFQVAPAELEAILLSHPSVEDAAV 124
Score = 87.7 bits (185), Expect = 6e-016
Identities = 49/100 (49%), Positives = 53/100 (53%)
Frame = -2 / +2
Query: 1574 TAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVF 1395
TAAS+ GW ATW PLYLMSSL RST S SS P SPV S P SMV
Sbjct: 125 TAASSTDGWDRRMASSSAGATWKPLYLMSSLIRSTTNTSPSSSM*PTSPVWSQPLASMVR 304
Query: 1394 AVASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSS 1275
+V+S L P I QISP D PVSGS F+S
Sbjct: 305 SVSSFFL**PCITAWLRTQISPAVFLGSDRPVSGSTNFTS 424
Score = 57.0 bits (118), Expect = 1e-006
Identities = 30/83 (36%), Positives = 40/83 (48%)
Frame = -3 / +3
Query: 1537 WPRAPPERLGTPCT**AP*AGXXXXXXXXXXRTQCLRCAATPPSRWSSPLPPGC*GTLSS 1358
WP A E+ G+PCT**AP*+G ++ RC A+P RW +P PP + +S
Sbjct: 162 WPPARQEQPGSPCT**AP*SGRRRTRRRRRRCSRRRRCGASPWRRWCAPSPPSSCSSPAS 341
Query: 1357 TACP*CKSPRAGCGGGTARSPGR 1289
+SPR T GR
Sbjct: 342 RPGSGRRSPRPCSWAATGPCRGR 410
Score = 49.6 bits (102), Expect = 2e-004
Identities = 25/56 (44%), Positives = 34/56 (60%)
Frame = -1 / +1
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGI 1270
+V+GV+P L VDG R L + V H LAPDA+LPG V + + VD+L L +
Sbjct: 262 DVAGVEPALGVDGALRLLLLPVVALHHGLAPDADLPGRVLGQRPARVGVDELHLQV 429
Score = 32.7 bits (65), Expect(2) = 0.008
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3 / -3
Query: 1290 RPGDRAVPPPQPARGDLHQGQAVDERVPQQPGGNGEDHRLGGVA 1421
RP V + RGDL D + Q+ GG+G HR G+A
Sbjct: 409 RPRHGPVAAQEHGRGDLRPEPGRDAGLLQEEGGDGAHHRRQGLA 278
Score = 29.0 bits (57), Expect(2) = 0.008
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3 / -3
Query: 1476 PAQGAHQVQGVPSRS 1520
P QGAHQVQG+P S
Sbjct: 223 PDQGAHQVQGLPGCS 179
>gb|CD235658.1|CD235658 SS1_37_F06.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_37_F06_A012 3', mRNA sequence
Length = 515
Score = 177 bits (381), Expect = 5e-043
Identities = 74/105 (70%), Positives = 89/105 (84%)
Frame = +1 / +3
Query: 1483 KELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEI 1662
KELIK+KGFQV PAELEA+LIAHPSI DAAVV KDD+ GE+PVAFVV + S I ED I
Sbjct: 3 KELIKFKGFQVPPAELEALLIAHPSIADAAVVPQKDDAAGEVPVAFVVRAADSDIAEDAI 182
Query: 1663 KQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLASGFS 1797
K++V+KQVVFYKRLHK++F +IPK+ SGKILR++LRAKLA+ S
Sbjct: 183 KEFVSKQVVFYKRLHKVYFTPSIPKSASGKILRRELRAKLAAAAS 317
Score = 113 bits (242), Expect = 8e-024
Identities = 54/101 (53%), Positives = 58/101 (57%)
Frame = -2 / -2
Query: 1784 ASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGI 1605
AS A S L+I PD LGM K LCSLL*NTTC T L++SS + E TT ATG
Sbjct: 304 ASLARSSLLRIFPDADLGMEGVKYTLCSLL*NTTCLETNSLMASSAMSESAARTTKATGT 125
Query: 1604 SPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSL 1482
SP SSF TTAAS M GW TW PL LMSSL
Sbjct: 124 SPAASSFCGTTAASAMDGWAMSRASSSAGGTWKPLNLMSSL 2
Score = 68.9 bits (144), Expect(2) = 5e-012
Identities = 36/67 (53%), Positives = 41/67 (61%)
Frame = -1 / -1
Query: 1785 RQLCSQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRD 1606
R+L + + P +L G RLGDG E LV PLVEHHL LLD +L D G G E RD
Sbjct: 305 RELGA*LSPQDLPGRRLGDGGGEVHLV*PLVEHHLLGDELLDGILRDVGVGGADHEGDRD 126
Query: 1605 LAAGVIL 1585
LA GVIL
Sbjct: 125 LAGGVIL 105
Score = 42.3 bits (86), Expect(2) = 6e-005
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +3 / +2
Query: 1662 QAVRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKA 1781
Q VR + GGVLQEA Q +L HPQ +R+D +E + +A
Sbjct: 182 QGVRLQAGGVLQEATQGVLHPLHPQVGVREDPEERATRQA 301
Score = 29.9 bits (59), Expect(2) = 6e-005
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3 / +2
Query: 1482 QGAHQVQGVPSRSGGA 1529
QGAHQVQG+P +G A
Sbjct: 2 QGAHQVQGLPGAAGRA 49
Score = 24.4 bits (47), Expect(2) = 5e-012
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -3 / -3
Query: 1543 *AWPRAPPERLGTPCT**AP* 1481
*A PRA P G+P T**AP*
Sbjct: 63 *AEPRARPAAPGSP*T**AP* 1
>gb|CW344133.1|CW344133 104_846_11487796_116_36192_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11487796, DNA
sequence
Length = 518
Score = 176 bits (378), Expect = 1e-042
Identities = 71/106 (66%), Positives = 87/106 (82%)
Frame = +1 / +3
Query: 850 DDVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIA 1029
DDV+LC LPMFH+YSL++I++CG+R GAA+V+M+RFD RM ELV+RH ITI PLV PI
Sbjct: 3 DDVILCSLPMFHIYSLNTIMMCGLRVGAAIVVMRRFDLARMMELVERHRITIAPLVPPIV 182
Query: 1030 VEMVKSDAIDRHDLSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQ 1167
V + KSD HDLSSVRMV+SGAAPMGK+++D AKLP AVLGQ
Sbjct: 183 VAVAKSDEAASHDLSSVRMVLSGAAPMGKDIEDAFMAKLPGAVLGQ 320
Score = 124 bits (266), Expect = 4e-027
Identities = 59/106 (55%), Positives = 68/106 (64%)
Frame = -2 / -2
Query: 1166 CPSTARGSLARSRSCSSLPMGAAPEMTMRTDERSWRSMASLLTISTAMGSTSGTIVMPCL 987
CPSTA GSLA S S PMGAAPE T+ T++RSW + +SLL +T MG TSG +V+
Sbjct: 319 CPSTAPGSLAMKASSMSFPMGAAPESTILTEDRSWDAASSLLATATTMGGTSGAMVIRWR 140
Query: 986 FTSSNMRRVSKRFMITSAAPARIPHSRMECSEYTWNMGSTQRTTSS 849
TSS + SKR M T AAP R PH M SE WNMGS R TSS
Sbjct: 139 STSSIILARSKRRMTTMAAPTRRPHIMMVLSE*MWNMGSEHRITSS 2
Score = 115 bits (246), Expect = 2e-024
Identities = 53/99 (53%), Positives = 61/99 (61%)
Frame = -1 / -1
Query: 1167 LSEHGARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGVALDHLHRDGQHERHDRDAVP 988
LSEHGA ELG + VL +L HGRG + H +VV VAL DG+HER D D V
Sbjct: 320 LSEHGAGELGHEGVLDVLPHGRGAGEHHPDGGQVVGRGLVALGDGDHDGRHERGDGDPVA 141
Query: 987 LHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHGQ 871
LH+L H VEA HDH+ A A A DGV+RV VEHGQ
Sbjct: 140 LHELHHPGEVEAAHDHDGGADAEAAHHDGVERVDVEHGQ 24
Score = 47.3 bits (97), Expect(2) = 5e-005
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = +2 / +1
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDR 1168
W S PRPW R+ RT PSS APCSDR
Sbjct: 238 WCSPAPRPWGRTSRTPSWPSSPAPCSDR 321
Score = 22.1 bits (42), Expect(2) = 5e-005
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3 / +2
Query: 1041 QERRHRPPRPLV 1076
QERR R PRP++
Sbjct: 194 QERRGRVPRPVL 229
>gb|CF760165.1|CF760165 DSAF1_56_C09.b1_A011 Drought-stressed after flowering Sorghum bicolor
cDNA clone DSAF1_56_C09_A011 5', mRNA sequence
Length = 564
Score = 176 bits (378), Expect = 1e-042
Identities = 68/124 (54%), Positives = 97/124 (78%)
Frame = +1 / +1
Query: 1399 TIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVV 1578
T+DSEGWL TGD+ Y ++ ++IVDRLKELIKYKG+QV PAELE +L +HP I+DAAV+
Sbjct: 1 TVDSEGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVI 180
Query: 1579 QMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKIL 1758
D+ G++P+AF+V GS +T+ ++ +VAKQV YK++ ++ FV AIPK+P+GKIL
Sbjct: 181 PYPDEDVGQLPMAFIVRKPGSNLTKQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKIL 360
Query: 1759 RKDL 1770
R++L
Sbjct: 361 RREL 372
Score = 71.2 bits (149), Expect = 5e-011
Identities = 47/128 (36%), Positives = 58/128 (45%)
Frame = -2 / -2
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATG 1608
D + + S KI P G LG+A TK + L TC AT + V EP T A G
Sbjct: 389 DTACSTSSRRKIFPAGDLGIAETKATRRTFLYGATCLATKSMTCCLVRFEPGFLTIKAIG 210
Query: 1607 ISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSP 1428
P SS TAAS + G T PLY ++S +RSTM + S SP
Sbjct: 209 SCPTSSSGYGITAASMISG*EFRICSSSAGGT*YPLYFINSFNRSTM*RNPSSLK*HRSP 30
Query: 1427 VCSHPSES 1404
V + PSES
Sbjct: 29 VFNQPSES 6
>gb|CW345534.1|CW345534 104_848_11488543_148_36210_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488543, DNA
sequence
Length = 632
Score = 145 bits (311), Expect(2) = 7e-042
Identities = 56/71 (78%), Positives = 65/71 (91%)
Frame = +1 / +3
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLI 1545
GYLNNP+AT +ID++GWLHTGD+G+VDD DEIFIVDRLKE+IKYKG QVAPAE+EA+LI
Sbjct: 15 GYLNNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEALLI 194
Query: 1546 AHPSIVDAAVV 1578
HPSI DAAVV
Sbjct: 195 THPSIADAAVV 227
Score = 103 bits (219), Expect(2) = 2e-024
Identities = 47/71 (66%), Positives = 48/71 (67%)
Frame = -2 / -2
Query: 1577 TTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMV 1398
TTAAS MLGW ATW PLY M SLS STMKISS SST P SPVCS PS SM+
Sbjct: 226 TTAASAMLGWVMSRASISAGATWRPLYFMISLSLSTMKISSSSSTKPTSPVCSQPSASML 47
Query: 1397 FAVASGLLRYP 1365
F VASGL R P
Sbjct: 46 FFVASGLFR*P 14
Score = 51.9 bits (107), Expect(2) = 7e-042
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +1 / +3
Query: 1600 GEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAI 1731
GEIPVAFV + GS ++ED++KQ+VAK+V+F L F+ +
Sbjct: 369 GEIPVAFVAKAKGSELSEDDVKQFVAKEVIFIFLLPPFEFMHVL 500
Score = 35.9 bits (72), Expect(2) = 2e-024
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = -2 / -2
Query: 1691 NTTCFATYCLISSSVIPEPPDATTNATGISPQESS 1587
N T AT CL SSS+ P T ATGISP S
Sbjct: 460 NITSLATNCLTSSSLSSLPLALATKATGISPISGS 356
>gb|CW073480.1|CW073480 104_335_10779929_114_31363_329 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779929, DNA
sequence
Length = 743
Score = 137 bits (294), Expect(2) = 4e-041
Identities = 53/68 (77%), Positives = 62/68 (91%)
Frame = +1 / +3
Query: 1375 NNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHP 1554
NNP+AT +ID++GWLHTGD+G+VDD DEIFIVDRLKE+IKYKG QVAPAE+EA+LI HP
Sbjct: 3 NNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEALLITHP 182
Query: 1555 SIVDAAVV 1578
SI DAAVV
Sbjct: 183 SIADAAVV 206
Score = 99.6 bits (211), Expect(3) = 1e-025
Identities = 45/67 (67%), Positives = 46/67 (68%)
Frame = -2 / -2
Query: 1577 TTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMV 1398
TTAAS MLGW ATW PLY M SLS STMKISS SST P SPVCS PS SM+
Sbjct: 205 TTAASAMLGWVMSRASISAGATWRPLYFMISLSLSTMKISSSSSTKPTSPVCSQPSASML 26
Query: 1397 FAVASGL 1377
F VASGL
Sbjct: 25 FFVASGL 5
Score = 57.4 bits (119), Expect(2) = 4e-041
Identities = 20/34 (58%), Positives = 30/34 (88%)
Frame = +1 / +3
Query: 1681 QVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKL 1782
QV++YK++ ++ F++ IPKAPSGKILRK+LR +L
Sbjct: 570 QVIYYKKVREVIFIDKIPKAPSGKILRKELRKQL 671
Score = 51.9 bits (107), Expect = 3e-005
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +1 / +3
Query: 1600 GEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAI 1731
GEIPVAFV + GS ++ED++KQ+VAK+V+F L F+ +
Sbjct: 348 GEIPVAFVAKAKGSELSEDDVKQFVAKEVIFIFLLPPFEFMHVL 479
Score = 35.9 bits (72), Expect(3) = 1e-025
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = -2 / -2
Query: 1691 NTTCFATYCLISSSVIPEPPDATTNATGISPQESS 1587
N T AT CL SSS+ P T ATGISP S
Sbjct: 439 NITSLATNCLTSSSLSSLPLALATKATGISPISGS 335
Score = 27.6 bits (54), Expect(3) = 1e-025
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2 / -2
Query: 1772 LRSFLKILPDGALGMASTK 1716
L S ILPDGALG+ S K
Sbjct: 661 LSSLRNILPDGALGILSMK 605
>gb|CD429254.1|CD429254 ETH1_3_C09.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_3_C09_A002 5', mRNA sequence
Length = 577
Score = 92.3 bits (195), Expect(2) = 6e-039
Identities = 44/70 (62%), Positives = 49/70 (70%)
Frame = +1 / +3
Query: 349 RRVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAA 528
R AA RA LG+ G VM L+ NS EF L+F A SR+GAA TTANP+ TP EIA Q A
Sbjct: 282 RLAAALRRAPLGLGRGAVVMNLMLNSAEFVLSFFAASRVGAAVTTANPMSTPHEIANQIA 461
Query: 529 ASGATVVITE 558
ASGATVV TE
Sbjct: 462 ASGATVVFTE 491
Score = 91.8 bits (194), Expect(2) = 6e-039
Identities = 39/67 (58%), Positives = 47/67 (70%)
Frame = +1 / +3
Query: 172 EPQAETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSR 351
E + +FRS LPDIAI + LPLH Y ERL E DR CLIDGATG T+ +VDRL+R
Sbjct: 102 EEASPEIIFRSKLPDIAITNFLPLHRYCFERLPEVADRPCLIDGATGAVRTYAEVDRLTR 281
Query: 352 RVAAGMR 372
R+AA +R
Sbjct: 282 RLAAALR 302
Score = 77.1 bits (162), Expect = 8e-013
Identities = 41/70 (58%), Positives = 44/70 (62%)
Frame = -2 / -1
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPR 378
SV TTVAPEAA LAIS GV GLAVV AAP R+ A+ S NS EF IT P +P
Sbjct: 490 SVNTTVAPEAAIWLAISCGVDIGLAVVTAAPTRDAAKKESTNSAEFSIRFITTAPRPSPS 311
Query: 377 QARIPAATRR 348
AR AA RR
Sbjct: 310 GARRSAAARR 281
>gb|CX613521.1|CX613521 GABR1_8_D10.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_D10_A002 5', mRNA sequence
Length = 775
Score = 82.2 bits (173), Expect(3) = 3e-038
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = +1 / +2
Query: 352 RVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAA 531
R AA +GV G VM LL N EFA FL +RLGAA TTANP +TP EI +QA A
Sbjct: 350 RRAASGLRAMGVGKGDVVMNLLRNCPEFAFTFLGAARLGAATTTANPFYTPHEIHRQAEA 529
Query: 532 SGATVVITE 558
+GA V++TE
Sbjct: 530 AGAKVIVTE 556
Score = 76.7 bits (161), Expect(3) = 3e-038
Identities = 32/70 (45%), Positives = 44/70 (62%)
Frame = +1 / +2
Query: 166 PTEPQAETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRL 345
P + VFRS LPD+ I + L Y +++E DRACLIDG TG + T+ +V+ L
Sbjct: 167 PEAEEKAAVVFRSKLPDVEINNSQSLQTYCFGKMSEVADRACLIDGQTGASYTYAEVESL 346
Query: 346 SRRVAAGMRA 375
SRR A+G+RA
Sbjct: 347 SRRAASGLRA 376
Score = 57.4 bits (119), Expect(3) = 4e-013
Identities = 33/69 (47%), Positives = 37/69 (53%)
Frame = -2 / -2
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPR 378
SV T+AP A+A IS GV +GLAVV AAP R R ANS + IT PL TP
Sbjct: 555 SVTMTLAPAASAWRWISCGV*NGLAVVVAAPSRAAPRKVKANSGQLRSRFITTSPLPTPM 376
Query: 377 QARIPAATR 351
AA R
Sbjct: 375 ARSPDAARR 349
Score = 47.3 bits (97), Expect(3) = 3e-038
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1 / +2
Query: 730 LPYSSGTTGLPKGVMLSHR 786
LPYSSGTTGLPKGVML+HR
Sbjct: 716 LPYSSGTTGLPKGVMLTHR 772
Score = 29.0 bits (57), Expect(3) = 4e-013
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2 / -2
Query: 776 SITPLGSPVVPDEYG 732
S+TPLG PVVP+E G
Sbjct: 762 SMTPLGRPVVPEE*G 718
Score = 27.6 bits (54), Expect(3) = 4e-013
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1 / -1
Query: 660 GGSEVGERDAALCAVARGDDGDA 592
G +GE AA+ A GDDGDA
Sbjct: 667 GRDHLGELHAAVEAAVDGDDGDA 599
>gb|CW302339.1|CW302339 104_786_11464668_116_35663_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464668, DNA
sequence
Length = 703
Score = 122 bits (261), Expect(2) = 1e-037
Identities = 43/84 (51%), Positives = 62/84 (73%)
Frame = +1 / +3
Query: 1240 KSGACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTIDSEGW 1419
K + G ++ N E+K +DP+TG SL +N GEIC+R + +M GY E T +TID++GW
Sbjct: 450 KKNSVGFILPNLEVKFVDPDTGRSLPKNTAGEICVRSQAVMXGYYRKKEETERTIDAKGW 629
Query: 1420 LHTGDIGYVDDGDEIFIVDRLKEL 1491
LHTGD+GY+DD ++F+VDR+KEL
Sbjct: 630 LHTGDVGYIDDDGDVFVVDRIKEL 701
Score = 60.6 bits (126), Expect(2) = 1e-037
Identities = 25/77 (32%), Positives = 39/77 (50%)
Frame = +1 / +2
Query: 856 VVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAVE 1035
V L ++P FH+Y + I +R +V+M RFD + H + P+V P+ +
Sbjct: 56 VTLGLMPFFHIYGITGICCSTLRHKGTVVVMDRFDLRTFLGALVTHRVRFAPIVPPVMLA 235
Query: 1036 MVKSDAIDRHDLSSVRM 1086
MVKS D DLS + +
Sbjct: 236 MVKSSVADEFDLSDLAL 286
Score = 58.8 bits (122), Expect(2) = 7e-012
Identities = 36/73 (49%), Positives = 39/73 (53%)
Frame = -2 / -1
Query: 1493 MSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISPGWLRW 1314
MSSL RST S SS P SPV S P SMV +V+S L P I QISP
Sbjct: 703 MSSLIRSTTNTSPSSSM*PTSPVWSQPLASMVRSVSSFFL**PCITAWLRTQISPAVFLG 524
Query: 1313 RDSPVSGSMIFSS 1275
D PVSGS F+S
Sbjct: 523 SDRPVSGSTNFTS 485
Score = 49.2 bits (101), Expect(2) = 1e-007
Identities = 25/56 (44%), Positives = 34/56 (60%)
Frame = -1 / -3
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGI 1270
+V+GV+P L VDG R L + V H LAPDA+LPG V + + VD+L L +
Sbjct: 647 DVAGVEPALGVDGALRLLLLPVVAXHHGLAPDADLPGRVLGQRPARVGVDELHLQV 480
Score = 37.7 bits (76), Expect(2) = 7e-012
Identities = 21/66 (31%), Positives = 27/66 (40%)
Frame = -1 / -1
Query: 1071 EVVAVDGVALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQR 892
EV V AL H G+H+ + AV + + VEA+H H R D
Sbjct: 271 EVELVGHGALHHGQHHGRHDGSEPHAVSHQRAQEGAQVEAVHHHHRALVPERGAADAGDA 92
Query: 891 VHVEHG 874
V VE G
Sbjct: 91 VDVEEG 74
Score = 35.4 bits (71), Expect = 3.0
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = -3 / -2
Query: 1492 *AP*AGXXXXXXXXXXRTQCLRCAATPPSRWSSPLPPGC*GTLSSTACP*CKSPRAGCGG 1313
*AP*+G ++ RC A+P RW +P PP + +S +SPR
Sbjct: 702 *AP*SGRRRTRRRRRRCSRRRRCGASPWRRWCAPSPPSSCSSXASRPGSGRRSPRPCSWA 523
Query: 1312 GTARSPGR 1289
T GR
Sbjct: 522 ATGPCRGR 499
Score = 32.7 bits (65), Expect(2) = 1e-007
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = -2 / -2
Query: 1073 ERSWRSMASLLTISTAMGSTSGTIVMPCLFTSSNMRRVSKRFMITSAAPARIPHSRMECS 894
ERS S L T+++ G T G + + ++ R SKR + T+ R +M
Sbjct: 273 ERSNSSATELFTMASITGGTMGANLTR*VTSAPRKVRRSKRSITTTVPLCRSVEQQMPVM 94
Query: 893 EYTWNMGSTQRTTS 852
W G + R T+
Sbjct: 93 P*MWKKGMSPRVTT 52
>gb|CW188088.1|CW188088 104_607_11172835_116_36721_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11172835, DNA
sequence
Length = 621
Score = 157 bits (338), Expect = 4e-037
Identities = 61/99 (61%), Positives = 80/99 (80%)
Frame = +1 / -3
Query: 814 VDGDNPNLHFREDDVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRH 993
VDG+NPNLHF DDVVLCVLP+FH+YSL+S+LL G+RAG A+VIM++F+ + ELV+ H
Sbjct: 298 VDGENPNLHFSSDDVVLCVLPLFHIYSLNSVLLAGLRAGCAIVIMRKFEIGALVELVRAH 119
Query: 994 GITIVPLVLPIAVEMVKSDAIDRHDLSSVRMVISGAAPM 1110
G+T+ P V PI VE+ KS + DL+S+RMV+SGAAPM
Sbjct: 118 GVTVAPFVPPIVVEIAKSPRVGAADLASIRMVMSGAAPM 2
Score = 113 bits (241), Expect = 1e-023
Identities = 55/99 (55%), Positives = 58/99 (58%)
Frame = -2 / +3
Query: 1109 MGAAPEMTMRTDERSWRSMASLLTISTAMGSTSGTIVMPCLFTSSNMRRVSKRFMITSAA 930
MGAAP+MTMR + RS LL IST MG T G V PC TSS +S MIT A
Sbjct: 3 MGAAPDMTMRMEARSAAPTRGLLAISTTMGGTKGATVTPCARTSSTSAPISNLRMITMAH 182
Query: 929 PARIPHSRMECSEYTWNMGSTQRTTSSSRKWRFGLSPST 813
PAR P E SE WN GST TTSS K RFG SPST
Sbjct: 183 PARSPARSTELSE*MWNSGSTHSTTSSLLKCRFGFSPST 299
Score = 78.0 bits (164), Expect = 5e-013
Identities = 36/81 (44%), Positives = 41/81 (50%)
Frame = -1 / +2
Query: 1110 HGRGPRDDHAHRREVVAVDGVALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERR 931
HGR DHA EV AL LH DG+HE AV HQL +E HDH+
Sbjct: 2 HGRRAGHDHADGGEVGGAHAGALGDLHHDGRHEGRHGHAVRAHQLHQRADLELAHDHDGA 181
Query: 930 AGAHPAQQDGVQRVHVEHGQH 868
GA P Q+ V+RV VE QH
Sbjct: 182 PGAQPRQEHRVERVDVEQRQH 244
>gb|CW041863.1|CW041863 104_275_10506796_115_30285 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506796, DNA
sequence
Length = 601
Score = 155 bits (333), Expect = 2e-036
Identities = 60/98 (61%), Positives = 79/98 (80%)
Frame = +1 / -1
Query: 814 VDGDNPNLHFREDDVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRH 993
VDG+NPNLHF DDVVLCVLP+FH+YSL+S+LL G+RAG A+VIM++F+ + ELV+ H
Sbjct: 295 VDGENPNLHFSSDDVVLCVLPLFHIYSLNSVLLAGLRAGCAIVIMRKFEIGALVELVRAH 116
Query: 994 GITIVPLVLPIAVEMVKSDAIDRHDLSSVRMVISGAAP 1107
G+T+ P V PI VE+ KS + DL+S+RMV+SGAAP
Sbjct: 115 GVTVAPFVPPIVVEIAKSPRVGAADLASIRMVMSGAAP 2
Score = 111 bits (236), Expect = 5e-023
Identities = 54/98 (55%), Positives = 57/98 (58%)
Frame = -2 / +3
Query: 1106 GAAPEMTMRTDERSWRSMASLLTISTAMGSTSGTIVMPCLFTSSNMRRVSKRFMITSAAP 927
GAAP+MTMR + RS LL IST MG T G V PC TSS +S MIT A P
Sbjct: 3 GAAPDMTMRMEARSAAPTRGLLAISTTMGGTKGATVTPCARTSSTSAPISNLRMITMAHP 182
Query: 926 ARIPHSRMECSEYTWNMGSTQRTTSSSRKWRFGLSPST 813
AR P E SE WN GST TTSS K RFG SPST
Sbjct: 183 ARSPARSTELSE*MWNSGSTHSTTSSLLKCRFGFSPST 296
Score = 74.4 bits (156), Expect = 6e-012
Identities = 35/80 (43%), Positives = 40/80 (50%)
Frame = -1 / +2
Query: 1107 GRGPRDDHAHRREVVAVDGVALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRA 928
GR DHA EV AL LH DG+HE AV HQL +E HDH+
Sbjct: 2 GRRAGHDHADGGEVGGAHAGALGDLHHDGRHEGRHGHAVRAHQLHQRADLELAHDHDGAP 181
Query: 927 GAHPAQQDGVQRVHVEHGQH 868
GA P Q+ V+RV VE QH
Sbjct: 182 GAQPRQEHRVERVDVEQRQH 241
>gb|CL185168.1|CL185168 104_399_10899340_114_32393_016 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899340, DNA
sequence
Length = 753
Score = 86.3 bits (182), Expect(3) = 2e-033
Identities = 39/108 (36%), Positives = 62/108 (57%)
Frame = +1 / +2
Query: 799 SVAQLVDGDNPNLHFREDDVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFE 978
+ A +V D L +V LC LPMFH++ + + L ++ G A+V+M RFD +
Sbjct: 428 AAATMVTSDQDELGEGGRNVFLCFLPMFHIFGMAVVTLGQLQRGNAVVVMARFDVDAVLA 607
Query: 979 LVKRHGITIVPLVLPIAVEMVKSDAIDRHDLSSVRMVISGAAPMGKEL 1122
V+RH +T + P + + K R+DLSS+R + SGAAP+GK++
Sbjct: 608 AVERHRVTYIFGAPPAMIALAKHGGGRRYDLSSLRCIGSGAAPLGKDV 751
Score = 67.5 bits (141), Expect(3) = 2e-033
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +1 / +2
Query: 403 VMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
V+LL PN V + + FLA + LGA ATTANP +TP EIAKQAA + A +V+T
Sbjct: 8 VLLLAPNCVLYPVCFLAVTSLGAVATTANPRYTPREIAKQAADARAKLVVT 160
Score = 52.4 bits (108), Expect(3) = 4e-016
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = -2 / -1
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSIT 402
+V T++A +AACLAIS GV GLAVVA AP AR + ST+ G S T
Sbjct: 162 TVTTSLARASAACLAISRGV*RGLAVVATAPSEVTARKQTG*STQLGARSST 7
Score = 46.9 bits (96), Expect(3) = 4e-016
Identities = 30/83 (36%), Positives = 34/83 (40%)
Frame = -1 / -3
Query: 1119 LLAHGRGPRDDHAHRREVVAVDGVALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDH 940
+LA RG R D R EVV L + RDAV L EH VE HD
Sbjct: 748 VLAERRGARADAPERAEVVPAAPAVLGERDHRRRRAEDVRDAVALDGGEHGVDVEPGHDD 569
Query: 939 ERRAGAHPAQQDGVQRVHVEHGQ 871
+ A A+ D VEHGQ
Sbjct: 568 DGVAALQLAEGDHGHAEDVEHGQ 500
Score = 35.9 bits (72), Expect(3) = 2e-033
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1 / +2
Query: 736 YSSGTTGLPKGVMLSHRGLVTSVAQL 813
YSSGTTG KGV+L+HR + + +
Sbjct: 368 YSSGTTGESKGVVLTHRNFIAAATMV 445
Score = 31.8 bits (63), Expect(3) = 4e-016
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2 / -1
Query: 785 RCDSITPLGSPVVPDE 738
RC S TPL SPVVPDE
Sbjct: 417 RCVSTTPLLSPVVPDE 370
>gb|CW351983.1|CW351983 fsbb001f014a08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f014a08, DNA
sequence
Length = 510
Score = 114 bits (244), Expect(2) = 6e-033
Identities = 44/62 (70%), Positives = 55/62 (88%)
Frame = +1 / +3
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQLVDGDNPNLHFREDDVVLCVLPMFHVYSLHSIL 909
LP+SSGTTGLPKGV+L+H G V++VAQ VDG NPNL+ RE DV LCVLP+FH++SL+S+L
Sbjct: 324 LPFSSGTTGLPKGVVLTHGGQVSNVAQQVDGANPNLYMREGDVALCVLPLFHIFSLNSVL 503
Query: 910 LC 915
LC
Sbjct: 504 LC 509
Score = 92.3 bits (195), Expect(3) = 9e-027
Identities = 40/61 (65%), Positives = 42/61 (68%)
Frame = -2 / -3
Query: 914 HSRMECSEYTWNMGSTQRTTSSSRKWRFGLSPSTSCATLVTSPRCDSITPLGSPVVPDEY 735
HS E SE WN GSTQ TS SR +RFG +PST CATL T P S TPLGSPVVPDE
Sbjct: 508 HSSTELSEKMWNSGSTQSATSPSRMYRFGFAPSTCCATLDTCPPWVSTTPLGSPVVPDEN 329
Query: 734 G 732
G
Sbjct: 328 G 326
Score = 52.4 bits (108), Expect(2) = 6e-033
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +1 / +3
Query: 439 LAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVITEPAF 567
L FL S LGA T ANP TP EI KQ ASGA +++T+ A+
Sbjct: 6 LTFLGASFLGAVTTAANPFCTPLEIHKQFRASGAKLIVTQSAY 134
Score = 44.1 bits (90), Expect(3) = 9e-027
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = -2 / -3
Query: 554 VMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNAS 438
V ++APEA CL IS GV +GLA V APR + R S
Sbjct: 121 VTMSLAPEALNCLWISSGVQNGLAAVVTAPRNDAPRKVS 5
Score = 34.5 bits (69), Expect(2) = 0.053
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1 / -2
Query: 804 HAGYQPTVRQHHPLGQPRRA 745
H G+ P V +HH LGQPR A
Sbjct: 398 HVGHLPAVGEHHALGQPRGA 339
Score = 24.4 bits (47), Expect(3) = 9e-027
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1 / -2
Query: 669 IVGGGSEVGERDAALCAVARGDDGDAGE 586
+VGG ++ E AA V DG+ GE
Sbjct: 278 VVGGRDQLPEGQAAFRGVGHVVDGEDGE 195
Score = 24.4 bits (47), Expect(2) = 0.053
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1 / -2
Query: 915 AQQDGVQRVHVEHGQH 868
AQQ GV+R VE QH
Sbjct: 509 AQQHGVEREDVEQRQH 462
>gb|CW217309.1|CW217309 104_650_11195588_116_37132_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195588, DNA
sequence
Length = 601
Score = 144 bits (308), Expect = 6e-033
Identities = 55/93 (59%), Positives = 74/93 (79%)
Frame = +1 / +2
Query: 814 VDGDNPNLHFREDDVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRH 993
VDG+NPNLHF DDVVLCVLP+FH+YSL+S+LL G+RAG A+VIM++F+ + ELV+ H
Sbjct: 323 VDGENPNLHFSSDDVVLCVLPLFHIYSLNSVLLAGLRAGCAIVIMRKFEIGALVELVRAH 502
Query: 994 GITIVPLVLPIAVEMVKSDAIDRHDLSSVRMVI 1092
G+T+ P V PI VE+ KS + DL+S+RMV+
Sbjct: 503 GVTVAPFVPPIVVEIAKSPRVGAADLASIRMVM 601
Score = 100 bits (213), Expect = 8e-020
Identities = 50/93 (53%), Positives = 52/93 (55%)
Frame = -2 / -2
Query: 1091 MTMRTDERSWRSMASLLTISTAMGSTSGTIVMPCLFTSSNMRRVSKRFMITSAAPARIPH 912
MTMR + RS LL IST MG T G V PC TSS +S MIT A PAR P
Sbjct: 600 MTMRMEARSAAPTRGLLAISTTMGGTKGATVTPCARTSSTSAPISNLRMITMAHPARSPA 421
Query: 911 SRMECSEYTWNMGSTQRTTSSSRKWRFGLSPST 813
E SE WN GST TTSS K RFG SPST
Sbjct: 420 RSTELSE*MWNSGSTHSTTSSLLKCRFGFSPST 322
Score = 72.1 bits (151), Expect = 3e-011
Identities = 33/74 (44%), Positives = 38/74 (51%)
Frame = -1 / -1
Query: 1089 DHAHRREVVAVDGVALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQ 910
DHA EV AL LH DG+HE AV HQL +E HDH+ GA P Q
Sbjct: 598 DHADGGEVGGAHAGALGDLHHDGRHEGRHGHAVRAHQLHQRADLELAHDHDGAPGAQPRQ 419
Query: 909 QDGVQRVHVEHGQH 868
+ V+RV VE QH
Sbjct: 418 EHRVERVDVEQRQH 377
>gb|CW034153.1|CW034153 104_264_10502381_115_30380 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502381, DNA
sequence
Length = 541
Score = 100 bits (213), Expect(2) = 8e-033
Identities = 42/49 (85%), Positives = 44/49 (89%)
Frame = +1 / -2
Query: 1432 DIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVV 1578
DIGYVDD DEIFIVDRLKE+IKYKGFQV PAELEA+LI HP I DAAVV
Sbjct: 540 DIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 394
Score = 62.9 bits (131), Expect(2) = 2e-017
Identities = 30/49 (61%), Positives = 31/49 (63%)
Frame = -2 / +2
Query: 1577 TTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMS 1431
TTAAS + G TWNPLYLM SLS STMKISS SST PMS
Sbjct: 395 TTAASLISGCVMRSASSSAGGTWNPLYLMISLSLSTMKISSSSST*PMS 541
Score = 62.9 bits (131), Expect(2) = 8e-033
Identities = 25/37 (67%), Positives = 32/37 (86%)
Frame = +1 / -2
Query: 1576 VQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQV 1686
++MKDD GEIPVAF+V + GS +TEDEIKQ+VAK+V
Sbjct: 300 LRMKDDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 190
Score = 48.7 bits (100), Expect(2) = 2e-017
Identities = 23/35 (65%), Positives = 23/35 (65%)
Frame = -2 / +2
Query: 1685 TCFATYCLISSSVIPEPPDATTNATGISPQESSFI 1581
T AT CLISSSV EP T ATGISP SSFI
Sbjct: 191 TSLATNCLISSSVTSEPSVRTMKATGISPARSSFI 295
Score = 40.9 bits (83), Expect(2) = 5e-005
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = -1 / +1
Query: 1686 HLFRHVLLDLVLGDPGAAGRHDERHRDLAAGVILH 1582
+L LLDL+LGD A G HDE RD + +ILH
Sbjct: 190 YLLGDKLLDLILGDFRAFGPHDEGDRDFTSKIILH 294
Score = 31.8 bits (63), Expect(2) = 5e-005
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -3 / +3
Query: 1534 PRAPPERLGTPCT**AP*A 1478
PRA P GTPCT**+P*A
Sbjct: 438 PRARPAAPGTPCT**SP*A 494
>gb|CW380207.1|CW380207 fsbb001f059o07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f059o07, DNA
sequence
Length = 603
Score = 143 bits (306), Expect = 1e-032
Identities = 57/72 (79%), Positives = 63/72 (87%)
Frame = +1 / +2
Query: 1165 QGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIIDPETGLSLHRNQPGEICI 1344
QGYGMTEAGPVLSMC AFAKEP P K G+CGTVVRNAELK++DP+TGLSL RN PGEICI
Sbjct: 383 QGYGMTEAGPVLSMCPAFAKEPTPAKPGSCGTVVRNAELKVVDPDTGLSLGRNLPGEICI 562
Query: 1345 RGKQLMKGYLNN 1380
RG Q+MKG + N
Sbjct: 563 RGPQIMKGTVIN 598
Score = 102 bits (218), Expect = 2e-020
Identities = 46/72 (63%), Positives = 51/72 (70%)
Frame = -2 / -1
Query: 1379 LLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLANAMHIE 1200
L+ PF+ C P MQISPG LR R+ PVSGS SSA TTVP P G GSLANA H++
Sbjct: 597 LITVPFMICGPRMQISPGRLRPRERPVSGSTTLSSALRTTVPHDPGLAGVGSLANAGHMD 418
Query: 1199 STGPASVIP*PC 1164
STGPASVIP PC
Sbjct: 417 STGPASVIPYPC 382
Score = 78.0 bits (164), Expect = 5e-013
Identities = 38/73 (52%), Positives = 44/73 (60%)
Frame = -1 / -3
Query: 1365 FHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHRAAGTGLHR*RLLGKRHAHREHRAC 1186
FH L APDA+L G VA EG+ + V L LGI HHRAA L RLLG+R AH +H
Sbjct: 583 FHDLRAPDADLAGEVAAEGEARVGVHHLELGIAHHRAARPRLGGRRLLGERRAHGQHGPG 404
Query: 1185 LCHPITLSEHGAR 1147
L HP+ L G R
Sbjct: 403 LRHPVPLQPPGRR 365
Score = 69.3 bits (145), Expect = 2e-010
Identities = 32/67 (47%), Positives = 39/67 (58%)
Frame = +3 / +1
Query: 1167 GLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQ 1346
G+ DD GR A+ V GV QGA + +RHGG +CRA+ P +P PQP R DLH
Sbjct: 385 GVRDDGGRARAVHVPGVRQGADARQAGVVRHGGAQCRAQGGGPRHGPLPRPQPPRRDLHP 564
Query: 1347 GQAVDER 1367
G A ER
Sbjct: 565 GPADHER 585
Score = 62.0 bits (129), Expect = 3e-008
Identities = 30/67 (44%), Positives = 35/67 (52%)
Frame = -3 / -2
Query: 1366 LSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAPGL 1187
LS +A P C+S R GCG G G ARH +PPCR +APW+TP T A
Sbjct: 584 LS*SAGPGCRSRRGGCGRGRGPCRGPPP*ARHCAPPCRTTPAWRASAPWRTPGTWTARAR 405
Query: 1186 PLSSHNP 1166
P SS P
Sbjct: 404 PPSSRTP 384
Score = 49.6 bits (102), Expect = 2e-004
Identities = 29/59 (49%), Positives = 30/59 (50%)
Frame = +2 / +3
Query: 1154 PCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW*GMPS*RSSTRRPGCPSTATSP 1330
P R G*+R C CA R PRSR S AARW MPS R T PS ATSP
Sbjct: 372 PGGCRGTG*RRPGPCCPCARRSPRSRRPPSRGRAARWCAMPSSRWWTPTRASPSAATSP 548
>gb|CW426309.1|CW426309 fsbb001f137k03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f137k03, DNA
sequence
Length = 479
Score = 142 bits (305), Expect = 2e-032
Identities = 55/73 (75%), Positives = 66/73 (90%)
Frame = +1 / -3
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLI 1545
GYLNNP+AT +ID++GWLHTGD+G+VDD DEIFIVDR KE+IKYKG QVAPAE+EA+LI
Sbjct: 342 GYLNNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRPKEIIKYKGLQVAPAEIEALLI 163
Query: 1546 AHPSIVDAAVVQM 1584
HPSI DAAVV++
Sbjct: 162 IHPSIADAAVVRV 124
Score = 101 bits (215), Expect = 4e-020
Identities = 46/71 (64%), Positives = 47/71 (66%)
Frame = -2 / +2
Query: 1577 TTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMV 1398
TTAAS MLGW ATW PLY M SL STMKISS SST P SPVCS PS SM+
Sbjct: 131 TTAASAMLGWMMSRASISAGATWRPLYFMISLGLSTMKISSSSSTKPTSPVCSQPSASML 310
Query: 1397 FAVASGLLRYP 1365
F VASGL R P
Sbjct: 311 FFVASGLFR*P 343
>gb|BG053729.1|BG053729 RHIZ2_9_A09.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 470
Score = 140 bits (301), Expect = 6e-032
Identities = 55/92 (59%), Positives = 76/92 (82%)
Frame = +1 / +2
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQLVDGDNPNLHFREDDVVLCVLPMFHVYSLHSIL 909
LP+SSGTTGLPKGV+L+H G V++VAQ VDG NPNL+ RE DV LCVLP+FH++SL+S+L
Sbjct: 188 LPFSSGTTGLPKGVVLTHGGQVSNVAQQVDGANPNLYMREGDVALCVLPLFHIFSLNSVL 367
Query: 910 LCGMRAGAALVIMKRFDTLRMFELVKRHGITI 1005
LC +RAGAA+++M +F+ M E ++R +T+
Sbjct: 368 LCALRAGAAVMLMPKFEMGAMLEGIQRWRVTM 463
Score = 103 bits (220), Expect(2) = 2e-023
Identities = 47/82 (57%), Positives = 54/82 (65%)
Frame = -2 / -3
Query: 977 SNMRRVSKRFMITSAAPARIPHSRMECSEYTWNMGSTQRTTSSSRKWRFGLSPSTSCATL 798
S++ +S + +AAPAR HS E SE WN GSTQ TS SR +RFG +PST CATL
Sbjct: 435 SSIAPISNLGISITAAPARSAHSSTELSEKMWNSGSTQSATSPSRMYRFGFAPSTCCATL 256
Query: 797 VTSPRCDSITPLGSPVVPDEYG 732
T P S TPLGSPVVPDE G
Sbjct: 255 DTCPPWVSTTPLGSPVVPDENG 190
Score = 55.6 bits (115), Expect(2) = 4e-011
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -1 / -2
Query: 1002 RDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHGQH 868
RDA PL L+H +E H H RRAG AQQ GV+R VE QH
Sbjct: 460 RDAPPLDALQHRAHLELGHQHHRRAGTQRAQQHGVEREDVEQRQH 326
Score = 34.5 bits (69), Expect(2) = 4e-011
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1 / -2
Query: 804 HAGYQPTVRQHHPLGQPRRA 745
H G+ P V +HH LGQPR A
Sbjct: 262 HVGHLPAVGEHHALGQPRGA 203
Score = 28.1 bits (55), Expect(2) = 2e-023
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1 / -2
Query: 669 IVGGGSEVGERDAALCAVARGDDGDAGE 586
+VG G ++ ER AA V R DG+ GE
Sbjct: 142 VVGWGDQLPER*AAFRGVGRVVDGEDGE 59
>gb|CD232738.1|CD232738 SS1_1_H12.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_1_H12_A012 5', mRNA sequence
Length = 641
Score = 82.2 bits (173), Expect(2) = 1e-031
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = +1 / +2
Query: 352 RVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAA 531
R AA +GV G VM LL N EFA FL +RLGAA TTANP +TP EI +QA A
Sbjct: 368 RRAASGLRAMGVGKGDVVMNLLRNCPEFAFTFLGAARLGAATTTANPFYTPHEIHRQAEA 547
Query: 532 SGATVVITE 558
+GA V++TE
Sbjct: 548 AGAKVIVTE 574
Score = 77.1 bits (162), Expect(2) = 1e-031
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = +1 / +2
Query: 166 PTEPQAETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRL 345
P + VFRS LPDI I + L Y +++E DRACLIDG TG + T+ +V+ L
Sbjct: 185 PEAEEKAVVVFRSKLPDIEINNSQSLQTYCFGKMSEVADRACLIDGQTGASYTYAEVESL 364
Query: 346 SRRVAAGMRA 375
SRR A+G+RA
Sbjct: 365 SRRAASGLRA 394
Score = 57.4 bits (119), Expect(2) = 2e-007
Identities = 33/69 (47%), Positives = 37/69 (53%)
Frame = -2 / -3
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPR 378
SV T+AP A+A IS GV +GLAVV AAP R R ANS + IT PL TP
Sbjct: 573 SVTMTLAPAASAWRWISCGV*NGLAVVVAAPSRAAPRKVKANSGQLRSRFITTSPLPTPM 394
Query: 377 QARIPAATR 351
AA R
Sbjct: 393 ARSPDAARR 367
Score = 23.5 bits (45), Expect(2) = 2e-007
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2 / -3
Query: 221 AMSGSVERNTVVSACGSVG 165
+MSGS+ERNT + + G
Sbjct: 240 SMSGSLERNTTTAFSSASG 184
>gb|CL190994.1|CL190994 104_409_10906471_116_32496_022 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10906471, DNA
sequence
Length = 737
Score = 137 bits (294), Expect = 5e-031
Identities = 54/65 (83%), Positives = 58/65 (89%)
Frame = +1 / +3
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLI 1545
GYLN+PEAT TID +GWLHTGDIGYVDD DEIFIVDRLKE+IKYKGFQV PAELEA+LI
Sbjct: 516 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 695
Query: 1546 AHPSI 1560
HP I
Sbjct: 696 THPEI 710
Score = 84.5 bits (178), Expect = 5e-015
Identities = 38/50 (76%), Positives = 39/50 (78%)
Frame = -2 / -2
Query: 1514 TWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYP 1365
TW PLYL+ SLS STM ISS SST PMSPVCSHPS SMVF VASG R P
Sbjct: 664 TWKPLYLIISLSLSTMNISSSSST*PMSPVCSHPSLSMVFFVASGSFR*P 515
>gb|CW186710.1|CW186710 104_604_11166709_148_36710_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11166709, DNA
sequence
Length = 668
Score = 134 bits (287), Expect = 5e-030
Identities = 54/94 (57%), Positives = 73/94 (77%)
Frame = +1 / +1
Query: 886 VYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAVEMVKSDAIDRH 1065
+YSL+S+LL G+RAG A+VIM++F+ + ELV+ HG+T+ P V PI VE+ KS +
Sbjct: 1 IYSLNSVLLAGLRAGCAIVIMRKFEIGALVELVRAHGVTVAPFVPPIVVEIAKSPRVGAA 180
Query: 1066 DLSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQ 1167
DL+S+RMV+SGAAPMGK+LQD AK+P AVLGQ
Sbjct: 181 DLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQ 282
Score = 95.9 bits (203), Expect = 2e-018
Identities = 48/91 (52%), Positives = 52/91 (57%)
Frame = -2 / -1
Query: 1163 PSTARGSLARSRSCSSLPMGAAPEMTMRTDERSWRSMASLLTISTAMGSTSGTIVMPCLF 984
PSTA G LA + S S PMGAAP+MTMR + RS LL IST MG T G V PC
Sbjct: 278 PSTALGILAMNASWRSFPMGAAPDMTMRMEARSAAPTRGLLAISTTMGGTKGATVTPCAR 99
Query: 983 TSSNMRRVSKRFMITSAAPARIPHSRMECSE 891
TSS +S MIT A PAR P E SE
Sbjct: 98 TSSTSAPISNLRMITMAHPARSPARSTELSE 6
Score = 91.8 bits (194), Expect = 3e-017
Identities = 41/93 (44%), Positives = 52/93 (55%)
Frame = -1 / -3
Query: 1167 LSEHGARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGVALDHLHRDGQHERHDRDAVP 988
L+EHG +LG ++VL++L HGR DHA EV AL LH DG+HE AV
Sbjct: 282 LAEHGVGDLGHERVLEVLPHGRRAGHDHADGGEVGGAHAGALGDLHHDGRHEGRHGHAVR 103
Query: 987 LHQLEHAESVEALHDHERRAGAHPAQQDGVQRV 889
HQL +E HDH+ GA P Q+ V+RV
Sbjct: 102 AHQLHQRADLELAHDHDGAPGAQPRQEHRVERV 4
Score = 35.4 bits (71), Expect = 3.0
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +2 / +2
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDR 1168
WS RPW R+ RT P S PCS R
Sbjct: 200 WSCPARRPWGRTSRTRSWPRSPTPCSAR 283
>gb|CN129828.1|CN129828 RHOH1_37_E03.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_37_E03_A002 5', mRNA sequence
Length = 433
Score = 91.8 bits (194), Expect(2) = 8e-030
Identities = 39/67 (58%), Positives = 47/67 (70%)
Frame = +1 / +2
Query: 172 EPQAETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSR 351
E + +FRS LPDIAI + LPLH Y ERL E DR CLIDGATG T+ +VDRL+R
Sbjct: 95 EEASPEIIFRSKLPDIAITNFLPLHRYCFERLPEVADRPCLIDGATGAVRTYAEVDRLTR 274
Query: 352 RVAAGMR 372
R+AA +R
Sbjct: 275 RLAAALR 295
Score = 61.6 bits (128), Expect(2) = 8e-030
Identities = 29/52 (55%), Positives = 34/52 (65%)
Frame = +1 / +2
Query: 349 RRVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTP 504
R AA RA LG+ G VM L+ NS EF L+F A S +GAA TTANP+ TP
Sbjct: 275 RLAAALRRAPLGLGRGAVVMNLMLNSAEFVLSFFAASLVGAAVTTANPMSTP 430
Score = 52.4 bits (108), Expect(2) = 2e-005
Identities = 27/52 (51%), Positives = 30/52 (57%)
Frame = -2 / -2
Query: 503 GVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPRQARIPAATRR 348
GV GLAVV AAP R+ A+ S NS EF IT P +P AR AA RR
Sbjct: 429 GVDIGLAVVTAAPTRDAAKKESTNSAEFSIRFITTAPRPSPSGARRSAAARR 274
Score = 21.7 bits (41), Expect(2) = 2e-005
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1 / -1
Query: 345 QAVHVAEGERFARGAVDE 292
QAVH+ G A AVDE
Sbjct: 268 QAVHLGVGAHGAGRAVDE 215
>gb|CW146571.1|CW146571 104_539_11139064_116_34991_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11139064, DNA
sequence
Length = 696
Score = 81.7 bits (172), Expect(3) = 3e-029
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +1 / -1
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQV 1515
GY+ + EA A + DSEGWL TGD+ Y+D +F+VDRLKELIKYKG+QV
Sbjct: 582 GYVADEEANASSFDSEGWLRTGDLCYIDQDGFLFVVDRLKELIKYKGYQV 433
Score = 52.8 bits (109), Expect(3) = 3e-029
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +1 / -2
Query: 1573 VVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEA 1728
V + + G+IPVA VV GS +TE ++ +VAK+V YK++ K+ FV++
Sbjct: 158 VYRYPHEEAGQIPVALVVRQPGSKVTEAQVIDHVAKRVAPYKKIRKVLFVDS 3
Score = 51.0 bits (105), Expect(2) = 4e-010
Identities = 26/50 (52%), Positives = 29/50 (58%)
Frame = -2 / +2
Query: 1505 PLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFIN 1356
PLYLMSS S ST S SPV SHPSES + A+AS YP I+
Sbjct: 443 PLYLMSSFSLSTTNKKPS*SM*QRSPVLSHPSESKLLALASSSATYPAIH 592
Score = 39.6 bits (80), Expect(2) = 4e-010
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = -2 / +1
Query: 1730 MASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQES 1590
M STK L L* T FAT+ + +SV P TT+ATGI P S
Sbjct: 1 MESTKSTLRIFL*GATLFATWSMT*ASVTLLPGCLTTSATGICPASS 141
Score = 34.5 bits (69), Expect(3) = 3e-029
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1 / -2
Query: 1498 YKGFQVAPAELEAMLIAHPSIVDAAVV 1578
Y QV PAELE +L + P ++DAAV+
Sbjct: 335 YLSLQVPPAELELVLQSLPEVIDAAVM 255
>gb|CW482182.1|CW482182 fsbb001f242c09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f242c09, DNA
sequence
Length = 599
Score = 77.1 bits (162), Expect(2) = 5e-029
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = +1 / +3
Query: 166 PTEPQAETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRL 345
P + VFRS LPDI I + L Y +++E DRACLIDG TG + T+ +V+ L
Sbjct: 225 PEAEEKAAVVFRSKLPDIEINNSQSLQTYCFGKMSEVADRACLIDGQTGASYTYAEVESL 404
Query: 346 SRRVAAGMRA 375
SRR A+G+RA
Sbjct: 405 SRRAASGLRA 434
Score = 73.5 bits (154), Expect(2) = 5e-029
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1 / +3
Query: 352 RVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAA 531
R AA +GV G VM LL N EFA FL +RLGAA TTANP +TP EI +QA A
Sbjct: 408 RRAASGLRAMGVGKGDVVMNLLRNCPEFAFTFLGAARLGAATTTANPFYTPHEIHRQAEA 587
Query: 532 SGA 540
+GA
Sbjct: 588 AGA 596
Score = 52.4 bits (108), Expect(2) = 6e-006
Identities = 30/64 (46%), Positives = 34/64 (53%)
Frame = -2 / -2
Query: 542 VAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPRQARIP 363
+AP A+A IS GV +GLAVV AAP R R ANS + IT PL TP
Sbjct: 598 LAPAASAWRWISCGV*NGLAVVVAAPSRAAPRKVKANSGQLRSRFITTSPLPTPMARSPD 419
Query: 362 AATR 351
AA R
Sbjct: 418 AARR 407
Score = 23.5 bits (45), Expect(2) = 6e-006
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2 / -2
Query: 221 AMSGSVERNTVVSACGSVG 165
+MSGS+ERNT + + G
Sbjct: 280 SMSGSLERNTTAAFSSASG 224
>gb|CL171779.1|CL171779 104_373_10889666_148_31776_338 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10889666, DNA
sequence
Length = 753
Score = 98.2 bits (208), Expect(3) = 3e-028
Identities = 39/105 (37%), Positives = 66/105 (62%)
Frame = +1 / +3
Query: 853 DVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAV 1032
+V LC LPMFH++ L + M+ G ++V+M RFD + V+RH +T + V P+ +
Sbjct: 381 NVFLCFLPMFHIFGLSVLTFAQMQRGNSVVVMSRFDMDSVMAAVQRHRVTHLFCVPPVMI 560
Query: 1033 EMVKSDAIDRHDLSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQ 1167
+ K ++ ++DLSS+R + SGAAP+GK++ + + P AV+ Q
Sbjct: 561 ALAKLGSVGKYDLSSLRFIGSGAAPLGKDVMEGVAKNFPEAVIAQ 695
Score = 55.1 bits (114), Expect(2) = 1e-010
Identities = 32/99 (32%), Positives = 43/99 (43%)
Frame = -1 / -2
Query: 1167 LSEHGARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGVALDHLHRDGQHERHDRDAVP 988
L HG ++ + +LA R R D R EVV D L + D +H D VP
Sbjct: 695 LGNHGFWKVLGHALHHVLAERRCARADEPERAEVVFPDTPELGERYHDRRHAEEVSDTVP 516
Query: 987 LHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHGQ 871
LH H V+ H + A H +++ Q VEHGQ
Sbjct: 515 LHGGHHRVHVKP*HHDDGVATLHLREREDGQAEDVEHGQ 399
Score = 40.0 bits (81), Expect(3) = 3e-028
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1 / +3
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQL 813
L YSSGTTG KGV+L+HR +++ A +
Sbjct: 264 LLYSSGTTGASKGVILTHRNFISAAAMM 347
Score = 39.6 bits (80), Expect = 0.17
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = -2 / -3
Query: 1157 TARGSLARSRSCSSLPMGAAPEMTMRTDERSWRSMASLLTISTAMGSTSGTIVMPCLFTS 978
TA G + S +SLP GAAPE ++ RS+ L + G T V C T+
Sbjct: 685 TASGKFLATPSITSLPSGAAPEPMNLSELRSYFPTLPSLASAIMTGGTQKR*VTRCRCTA 506
Query: 977 SNMRRVSKRFMITSAAP 927
+ +S R + T+ P
Sbjct: 505 AITESMSNRDITTTELP 455
Score = 34.1 bits (68), Expect(3) = 3e-028
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1 / +3
Query: 487 NPLHTPPEIAKQAAASGATVVIT 555
NPL+TP E+AKQA S A + IT
Sbjct: 3 NPLYTPREVAKQATDSRAKLAIT 71
Score = 33.6 bits (67), Expect(2) = 1e-010
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2 / -3
Query: 785 RCDSITPLGSPVVPDEY 735
RC ITPL +PVVPDEY
Sbjct: 319 RCVRITPLLAPVVPDEY 269
>gb|CW339593.1|CW339593 104_840_11485351_148_36139_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485351, DNA
sequence
Length = 679
Score = 96.8 bits (205), Expect(3) = 9e-028
Identities = 45/88 (51%), Positives = 57/88 (64%)
Frame = +1 / -2
Query: 292 LIDGATGETLTFGDVDRLSRRVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGA 471
L+D ATG LTFG + AA + + GVR G V+LL PN V + + FLA + LGA
Sbjct: 678 LVDAATGRALTFGSLRSAVLVAAAALSSRAGVRRGDAVLLLAPNCVLYPVCFLAVTSLGA 499
Query: 472 AATTANPLHTPPEIAKQAAASGATVVIT 555
ATTANP +TP EIAKQAA + A +V+T
Sbjct: 498 VATTANPRYTPREIAKQAADARAKLVVT 415
Score = 63.8 bits (133), Expect(2) = 1e-011
Identities = 33/67 (49%), Positives = 40/67 (59%)
Frame = -2 / +2
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPR 378
+V T++A +AACLAIS GV GLAVVA AP AR + ST+ G S T P RTP
Sbjct: 413 TVTTSLARASAACLAISRGV*RGLAVVATAPSEVTARKQTG*STQLGARSSTASPRRTPA 592
Query: 377 QARIPAA 357
+ AA
Sbjct: 593 REESAAA 613
Score = 37.7 bits (76), Expect(3) = 9e-028
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1 / -2
Query: 799 SVAQLVDGDNPNLHFREDDVVLCVLPMFHVYSLHSILLCGMRAGAALVI 945
+ A +V D L +V LC LPMFH++ + + L ++ G A+V+
Sbjct: 147 AAATMVTSDQDELGEGGRNVFLCFLPMFHIFGMAVVTLGQLQRGNAVVV 1
Score = 35.9 bits (72), Expect(3) = 9e-028
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1 / -2
Query: 736 YSSGTTGLPKGVMLSHRGLVTSVAQL 813
YSSGTTG KGV+L+HR + + +
Sbjct: 207 YSSGTTGESKGVVLTHRNFIAAATMV 130
Score = 31.8 bits (63), Expect(2) = 1e-011
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2 / +2
Query: 785 RCDSITPLGSPVVPDE 738
RC S TPL SPVVPDE
Sbjct: 158 RCVSTTPLLSPVVPDE 205
>gb|BI643612.1|BI643612 DG1_91_B11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 471
Score = 66.1 bits (138), Expect(3) = 3e-027
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +1 / +2
Query: 982 VKRHGITIVPLVLPIAVEMVKSDAIDRHDLSSVRMVISGAAPMGKELQDLLRAKLPRAVL 1161
V+RH +T + P + + K R+DLSS+R + SGAAP+GK++ + + P A +
Sbjct: 8 VERHRVTYIFGAPPAMIALAKHGGGRRYDLSSLRCIGSGAAPLGKDVMVAMADRFPGADI 187
Query: 1162 GQGYGMTEAGPVLSM 1206
QGYGMTE ++S+
Sbjct: 188 VQGYGMTETCGIISL 232
Score = 61.6 bits (128), Expect(3) = 3e-027
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = +1 / +2
Query: 1246 GACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTI 1404
G+ G +V E KI+D +T L NQ GEIC+RG +M+GY NN +AT TI
Sbjct: 266 GSTGALVIGVEAKIVDTKTMKHLPANQLGEICVRGPNIMEGYFNNVQATEFTI 424
Score = 39.1 bits (79), Expect(3) = 3e-011
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = -2 / -1
Query: 1184 SVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMRTDERSW 1062
SVIP*P +A G+L+ + +SLP GAAPE ++ RS+
Sbjct: 210 SVIP*PWTMSAPGNLSAIATMTSLPSGAAPEPMHLSELRSY 88
Score = 38.2 bits (77), Expect(3) = 3e-011
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = -2 / -1
Query: 1403 MVFAVASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPD 1242
+V +VA LL+ P I P QISP W R V S IF+S +T+ P P+
Sbjct: 423 IVNSVACTLLK*PSIMFGPRTQISPSWFAGRCFIVFVSTIFASTPMTSAPVEPN 262
Score = 35.9 bits (72), Expect = 2.2
Identities = 25/73 (34%), Positives = 29/73 (39%)
Frame = -1 / -3
Query: 1203 REHRACLCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGVALDHLHRD 1024
R + A H ITL GA E + +LA RG R D R EVV L
Sbjct: 229 RYYPAGFSHTITLDNVGAGESVSHSHHDVLAERRGARADAPERAEVVPAAPAVLGERDHR 50
Query: 1023 GQHERHDRDAVPL 985
+ RDAV L
Sbjct: 49 RRRAEDVRDAVAL 11
Score = 35.0 bits (70), Expect(3) = 3e-027
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +1 / +2
Query: 1411 EGWLHTGDIGYVDD 1452
+GWLHTGD+GY D+
Sbjct: 428 QGWLHTGDLGYFDE 469
Score = 30.4 bits (60), Expect(3) = 3e-011
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2 / -1
Query: 1451 SSTYPMSPVCSHP 1413
SS YP SPVC+HP
Sbjct: 468 SSKYPRSPVCNHP 430
>gb|CW222301.1|CW222301 104_657_11202303_148_37174_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11202303, DNA
sequence
Length = 690
Score = 122 bits (260), Expect = 3e-026
Identities = 46/60 (76%), Positives = 55/60 (91%)
Frame = +1 / +2
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLI 1545
GYLNNP+AT +ID++GWLHTGD+G+VDD DEIFIVDRLKE+IKYKG VAPAE+EA+LI
Sbjct: 506 GYLNNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLPVAPAEIEALLI 685
Score = 80.3 bits (169), Expect = 9e-014
Identities = 38/62 (61%), Positives = 39/62 (62%)
Frame = -2 / -1
Query: 1550 WXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLR 1371
W AT PLY M SLS STMKISS SST P SPVCS PS SM+F VASGL R
Sbjct: 690 WVMSRASISAGATGRPLYFMISLSLSTMKISSSSSTKPTSPVCSQPSASMLFFVASGLFR 511
Query: 1370 YP 1365
P
Sbjct: 510 *P 505
>gb|BZ350862.1|BZ350862 ht61f07.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ht61f07 5', DNA sequence
Length = 714
Score = 77.1 bits (162), Expect(3) = 3e-026
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = +1 / +3
Query: 1372 LNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQV 1515
+ + EATA T+DSEGWL TGD+ Y ++ ++IVDRLKELIKYKG+QV
Sbjct: 3 VGDDEATAATVDSEGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQV 146
Score = 43.7 bits (89), Expect(3) = 3e-026
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +1 / +1
Query: 1570 AVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQV 1686
A+ + D+ G++P+AF+V GS +T+ ++ +VAKQV
Sbjct: 415 ALCRYPDEDVGQLPMAFIVRKPGSNLTKQQVMDFVAKQV 531
Score = 40.0 bits (81), Expect = 0.13
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = -2 / -3
Query: 1505 PLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVAS 1383
PLY ++S +RSTM + S SPV + PSES V AVAS
Sbjct: 136 PLYFINSFNRSTM*RNPSSLK*HRSPVFNQPSESTVAAVAS 14
Score = 38.2 bits (77), Expect(3) = 3e-026
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1 / +1
Query: 1489 LIKYKGFQVAPAELEAMLIAHPSIVDAAVV 1578
++ Y QV PAELE +L +HP I+DAAV+
Sbjct: 223 VLTYILLQVPPAELEHILNSHPDIMDAAVI 312
>gb|CN143608.1|CN143608 WOUND1_17_G06.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_17_G06_A002 3', mRNA sequence
Length = 478
Score = 121 bits (259), Expect = 4e-026
Identities = 49/84 (58%), Positives = 67/84 (79%)
Frame = +1 / +1
Query: 1558 IVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPK 1737
I DAAVV MKD+ GE+PVAF++ S GS I+E+EIK +VAK+VVF KR++++FF ++IPK
Sbjct: 1 IKDAAVVSMKDELAGEVPVAFIIRSEGSEISENEIKHFVAKEVVFSKRINRVFFTDSIPK 180
Query: 1738 APSGKILRKDLRAKLASGFSNGSS 1809
PSGKI RKDLRA+LA+ + +
Sbjct: 181 NPSGKIFRKDLRARLAAAIPSSDN 252
Score = 100 bits (212), Expect = 1e-019
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -2 / -3
Query: 1784 ASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGI 1605
AS ALRSFLKILP+G GM S KK L LL NTT FAT CLIS S+I EP NATG
Sbjct: 227 ASRALRSFLKILPEGFFGMESVKKTLLILLENTTSFATKCLISFSLISEPSLRIMNATGT 48
Query: 1604 SPQESSFIWTTAAS 1563
SP SSFI TTAAS
Sbjct: 47 SPASSSFIETTAAS 6
Score = 56.1 bits (116), Expect = 2e-006
Identities = 28/64 (43%), Positives = 39/64 (60%)
Frame = -1 / -2
Query: 1773 SQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDLAAG 1594
SQ+LP NLAG L +G+ EE+ V PL EH L + + DLVL + A ++E +RD +
Sbjct: 216 SQVLPKNLAGGILRNGIREENSVDPLGEHDLLCNKMFDLVLTNLRAFTPYNECNRDFPSK 37
Query: 1593 VILH 1582
I H
Sbjct: 36 FIFH 25
Score = 40.0 bits (81), Expect = 0.13
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +3 / +3
Query: 1683 GGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKA 1781
G VLQE Q L G H + ++RQDF EG ES A
Sbjct: 126 GRVLQEDQQSFLHGFHSEESLRQDF*EGPESAA 224
>gb|CN143696.1|CN143696 WOUND1_17_G06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_17_G06_A002 5', mRNA sequence
Length = 403
Score = 121 bits (259), Expect = 4e-026
Identities = 45/71 (63%), Positives = 59/71 (83%)
Frame = +1 / +2
Query: 814 VDGDNPNLHFREDDVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRH 993
VDG+NPNLHF DDVVLCVLP+FH+YSL+S+LL G+RAG A+VIM++F+ + ELV+ H
Sbjct: 191 VDGENPNLHFSSDDVVLCVLPLFHIYSLNSVLLAGLRAGCAIVIMRKFEIGALVELVRAH 370
Query: 994 GITIVPLVLPI 1026
G+T+ P V PI
Sbjct: 371 GVTVAPFVPPI 403
Score = 80.8 bits (170), Expect = 7e-014
Identities = 39/71 (54%), Positives = 40/71 (56%)
Frame = -2 / -2
Query: 1025 MGSTSGTIVMPCLFTSSNMRRVSKRFMITSAAPARIPHSRMECSEYTWNMGSTQRTTSSS 846
MG T G V PC TSS +S MIT A PAR P E SE WN GST TTSS
Sbjct: 402 MGGTKGATVTPCARTSSTSAPISNLRMITMAHPARSPARSTELSE*MWNSGSTHSTTSSL 223
Query: 845 RKWRFGLSPST 813
K RFG SPST
Sbjct: 222 LKCRFGFSPST 190
Score = 56.1 bits (116), Expect = 2e-006
Identities = 24/53 (45%), Positives = 29/53 (54%)
Frame = -1 / -1
Query: 1026 DGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHGQH 868
DG+HE AV HQL +E HDH+ GA P Q+ V+RV VE QH
Sbjct: 403 DGRHEGRHGHAVRAHQLHQRADLELAHDHDGAPGAQPRQEH*VERVDVEQRQH 245
>gb|CW079348.1|CW079348 104_400_10899868_114_32401_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899868, DNA
sequence
Length = 726
Score = 99.6 bits (211), Expect(2) = 1e-025
Identities = 41/117 (35%), Positives = 67/117 (57%)
Frame = +1 / +2
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GW HTGDIG VD+ + +V R+KELI G +++P E++A+L+ P + A + DD
Sbjct: 221 GWFHTGDIGVVDEEGYVRLVGRIKELINRGGEKISPIEVDAVLLGAPGVAQAVSFGVPDD 400
Query: 1594 SCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRK 1764
GE V+ GS + E+E+ + + + +K K+F + +PK +GKI R+
Sbjct: 401 KYGEEINCAVIPRDGSALREEEVLAHCRRNLASFKVPKKVFITDDLPKTATGKIQRR 571
Score = 44.1 bits (90), Expect(2) = 9e-005
Identities = 29/85 (34%), Positives = 36/85 (42%)
Frame = -2 / -1
Query: 1658 SSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLS 1479
SSS +P T SP SS A G ++P LMSSL
Sbjct: 465 SSSRSADPSRGITAQLISSPYLSSGTPNDTACATPGAPSSTASTSIGEIFSPPRLMSSLI 286
Query: 1478 RSTMKISSPSSTYPMSPVCSHPSES 1404
R T + SST PMSPV +HP+ +
Sbjct: 285 RPTRRTYPSSSTTPMSPVWNHPNRN 211
Score = 40.0 bits (81), Expect(2) = 1e-025
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1 / +2
Query: 1297 ETGLSLHRNQPGEICIRGKQLMKGYLNNPEA 1389
E G + PGE+CIRG + GY NPEA
Sbjct: 107 EEGRRVAAGSPGEVCIRGDNVTAGYKGNPEA 199
Score = 24.4 bits (47), Expect(2) = 9e-005
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2 / -1
Query: 1388 ASGLLRYPFINCLPLMQISPG 1326
ASG YP + P M SPG
Sbjct: 198 ASGFPLYPAVTLSPRMHTSPG 136
>gb|CW071497.1|CW071497 104_323_10591543_116_30454 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591543, DNA
sequence
Length = 693
Score = 113 bits (241), Expect = 1e-023
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = +1 / -2
Query: 1675 AKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLASGFSNGSSC*C 1818
AKQVVFYKRLHK+FFVEAIPKAPSGKILRKDLRAKLASGFSNGSSC*C
Sbjct: 677 AKQVVFYKRLHKVFFVEAIPKAPSGKILRKDLRAKLASGFSNGSSC*C 534
Score = 111 bits (236), Expect(3) = 3e-025
Identities = 45/48 (93%), Positives = 47/48 (97%)
Frame = -2 / +1
Query: 1817 HQHDDPLENPDASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFA 1674
HQHDDPLENPDASFALRSFL+ILPDGALG+ASTKK LCSLL*NTTCFA
Sbjct: 535 HQHDDPLENPDASFALRSFLRILPDGALGIASTKKTLCSLL*NTTCFA 678
Score = 97.7 bits (207), Expect(2) = 7e-020
Identities = 41/48 (85%), Positives = 43/48 (89%)
Frame = -1 / +3
Query: 1818 ASTR*PVGESRRQLCSQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFR 1675
ASTR* +G+SRR LCSQILP NLA WRLGD LHEEDLVQPLVEHHLFR
Sbjct: 534 ASTR*SIGKSRR*LCSQILPQNLARWRLGDSLHEEDLVQPLVEHHLFR 677
Score = 88.1 bits (186), Expect = 4e-016
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = +3 / -1
Query: 1677 ETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKAGVWILQRVIVLM 1817
ETGGVLQEAAQ LLRGG+PQGAI QD +EGSESKA VWI Q +IVLM
Sbjct: 675 ETGGVLQEAAQGLLRGGYPQGAIWQDSEEGSESKASVWIFQWIIVLM 535
Score = 83.5 bits (176), Expect = 1e-014
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -3 / +2
Query: 1816 INTMTRWRIQTPALLSDPSLKSCRMAPWGWPPRRRSCAASC 1694
INTM W+IQT ALLSDPS +SC+MAPWG PPRRR CAASC
Sbjct: 536 INTMIHWKIQTLALLSDPSSESCQMAPWG*PPRRRPCAASC 658
Score = 50.1 bits (103), Expect = 1e-004
Identities = 24/40 (60%), Positives = 24/40 (60%)
Frame = +2 / -3
Query: 1700 GCTXXXXXXXXXXXHPARF*GRI*EQSWRLDSPTGHRVDA 1819
GCT H ARF*GRI*EQS RLD P HRVDA
Sbjct: 652 GCTRSSSWRLSPRRHLARF*GRI*EQS*RLDFPMDHRVDA 533
Score = 22.6 bits (43), Expect(3) = 3e-025
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1 / +1
Query: 1926 DCFLFTPF 1903
DCF FTPF
Sbjct: 412 DCFSFTPF 435
Score = 22.1 bits (42), Expect(3) = 3e-025
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / +1
Query: 1904 FLYIYLF*LVQHK 1866
F +LF*LVQHK
Sbjct: 436 FCISFLF*LVQHK 474
Score = 22.1 bits (42), Expect(2) = 7e-020
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / +3
Query: 1927 *LLLVYTVFCIYIF 1886
*LLLVYTVF F
Sbjct: 411 *LLLVYTVFLYIFF 452
>gb|CW194291.1|CW194291 104_617_11180020_116_36786_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180020, DNA
sequence
Length = 688
Score = 76.2 bits (160), Expect(3) = 3e-025
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +1 / -2
Query: 1672 VAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLASG 1791
V QVVFYK++HK+FF E+IPK PSGKILRKDLRA+LA+G
Sbjct: 288 VMLQVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAG 169
Score = 62.9 bits (131), Expect(3) = 3e-025
Identities = 25/37 (67%), Positives = 32/37 (86%)
Frame = +1 / -2
Query: 1576 VQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQV 1686
++MKDD GEIPVAF+V + GS +TEDEIKQ+VAK+V
Sbjct: 558 LRMKDDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 448
Score = 57.9 bits (120), Expect(2) = 7e-015
Identities = 27/45 (60%), Positives = 30/45 (66%)
Frame = -2 / +2
Query: 1802 PLENPDASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATY 1668
P P AS AL+SFL+ILPDG LGM S KK L L* TTC T+
Sbjct: 158 PQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTCSITF 292
Score = 50.6 bits (104), Expect = 9e-005
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = -1 / +1
Query: 1773 SQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDP 1642
SQ+LP*+LAG LGDG EE+LV LVE+HL ++ + DP
Sbjct: 187 SQVLP*DLAGRVLGDGFSEENLVDLLVENHLQHYIYIRFQSQDP 318
Score = 48.7 bits (100), Expect(2) = 7e-015
Identities = 23/35 (65%), Positives = 23/35 (65%)
Frame = -2 / +2
Query: 1685 TCFATYCLISSSVIPEPPDATTNATGISPQESSFI 1581
T AT CLISSSV EP T ATGISP SSFI
Sbjct: 449 TSLATNCLISSSVTSEPSVRTMKATGISPARSSFI 553
Score = 43.2 bits (88), Expect(2) = 3e-008
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / +3
Query: 1780 ALLSDPSLKSCRMAPWGWPPRRRSCAASC 1694
A LS PSL SCR WGW R+ C +SC
Sbjct: 180 AWLSSPSLGSCRTGSWGWIQ*RKPCGSSC 266
Score = 40.9 bits (83), Expect(2) = 3e-008
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = -1 / +1
Query: 1686 HLFRHVLLDLVLGDPGAAGRHDERHRDLAAGVILH 1582
+L LLDL+LGD A G HDE RD + +ILH
Sbjct: 448 YLLGDKLLDLILGDFRAFGPHDEGDRDFTSKIILH 552
Score = 40.5 bits (82), Expect = 0.092
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = +3 / -1
Query: 1683 GGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKA 1781
GG LQE Q L HPQ +RQD KEG ES+A
Sbjct: 277 GGFLQEDPQGFLH*IHPQEPVRQDPKEGLESQA 179
Score = 22.6 bits (43), Expect(3) = 3e-025
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / -2
Query: 1543 IAHPSIVDAAVV 1578
I HP I DAAVV
Sbjct: 687 ITHPEIKDAAVV 652
>gb|CW186709.1|CW186709 104_604_11166709_116_36709_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11166709, DNA
sequence
Length = 694
Score = 118 bits (252), Expect = 3e-025
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +1 / -1
Query: 1165 QGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIIDPETGLSLHRNQPGE 1335
QGYGMTEAGPVL+MC+AFAKEP VKSG+CGTVVRNAELKI+DP+T SL RNQPGE
Sbjct: 172 QGYGMTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTSESLGRNQPGE 2
Score = 99.1 bits (210), Expect = 2e-019
Identities = 43/56 (76%), Positives = 44/56 (78%)
Frame = -2 / +3
Query: 1334 SPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLANAMHIESTGPASVIP*P 1167
SPGW R DS VSGS I SSAFLTTVPQ PDFT NGSLA A H+ STGPASVIP P
Sbjct: 3 SPGWFRPSDSLVSGSTILSSAFLTTVPQEPDFTSNGSLAKARHMASTGPASVIPYP 170
Score = 65.7 bits (137), Expect = 2e-009
Identities = 30/55 (54%), Positives = 36/55 (65%)
Frame = +3 / -3
Query: 1167 GLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPAR 1331
G+WDDRGR A V G+ QGAV GEVR LRH +E A+D RP + V +PAR
Sbjct: 170 GVWDDRGRARAGHVPGLRQGAVRGEVRLLRHRRQERGAQDRRPRHQRVAGTKPAR 6
Score = 62.0 bits (129), Expect = 3e-008
Identities = 30/59 (50%), Positives = 36/59 (61%)
Frame = -1 / +2
Query: 1335 LPGLVAVEGQPGLRVDDL*LGIPHHRAAGTGLHR*RLLGKRHAHREHRACLCHPITLSE 1159
L LV+ + G+ VDDL L +P AAG GLH RLLG+ AH +H CL HPI L E
Sbjct: 2 LAWLVSSQRLAGVWVDDLELRVPDDGAAGAGLHLERLLGEGQAHGQHGPCLGHPIPLVE 178
Score = 57.4 bits (119), Expect = 7e-007
Identities = 31/56 (55%), Positives = 32/56 (57%)
Frame = +2 / -2
Query: 1160 SDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW*GMPS*RSSTRRPGCPSTATS 1327
S R MG* RQ C CAW PRSR R*SP PAA G S RSST+ P TS
Sbjct: 177 STRGMG*PRQGPCWPCAWPSPRSRSR*SPAPAAPSSGTRSSRSSTQTPASRWDETS 10
Score = 51.5 bits (106), Expect = 5e-005
Identities = 25/43 (58%), Positives = 26/43 (60%)
Frame = -3 / +1
Query: 1294 GR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAPGLPLSSHNP 1166
GR S A S CRR RTSP TAPW+ P T A LP SSH P
Sbjct: 43 GRRS*APRS*RRCRRSRTSPRTAPWRRPGTWPARALPRSSHTP 171
>gb|CW258266.1|CW258266 104_724_11227784_148_35167_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227784, DNA
sequence
Length = 557
Score = 58.8 bits (122), Expect(3) = 5e-025
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +1 / -1
Query: 853 DVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAV 1032
+ LC +PMFHVY L + + GA +V++ +++ M + +G+T +PLV PI V
Sbjct: 512 ETFLCTVPMFHVYGLVAFATGLLGCGATIVVLSKYELPEMLRSINEYGVTYLPLVPPILV 333
Query: 1033 EMV 1041
M+
Sbjct: 332 AML 324
Score = 50.1 bits (103), Expect(3) = 5e-025
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +1 / -1
Query: 1246 GACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKG 1368
G G + N E KI+DPETG +L N+ GE+ IRG +MKG
Sbjct: 134 GTAGLLSPNTEAKIVDPETGEALPVNRTGELWIRGPYVMKG 12
Score = 46.0 bits (94), Expect(3) = 5e-025
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +1 / -1
Query: 1069 LSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEA 1188
L ++R V+SG AP+ KEL + + K P+ + QGYG+TE+
Sbjct: 302 LGNLRKVLSGGAPLSKELIEGFKEKYPQVEILQGYGLTES 183
Score = 36.8 bits (74), Expect(4) = 2e-013
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -1 / +3
Query: 1038 HLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHG 874
H DG+HER D V + +H + + A A + +G + VHVEHG
Sbjct: 327 HGDEDGRHEREVGDPVFIDGAQHLGELVLGEHDDGGAAAEQPRGEGDKAVHVEHG 491
Score = 35.4 bits (71), Expect(4) = 2e-013
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -1 / +3
Query: 1365 FHQLLAPDANLPGLVAVEGQPGLRVDDL*LGI 1270
FH + PD L G V + GLRVDDL LG+
Sbjct: 15 FHDVWPPDPELAGAVHRQCLAGLRVDDLSLGV 110
Score = 32.2 bits (64), Expect(4) = 2e-013
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -2 / +1
Query: 1184 SVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMR 1080
SV P PC + G + + S SSL GA PE T+R
Sbjct: 187 SVSPYPCRISTCGYFSLNPSMSSLLSGAPPESTLR 291
Score = 27.6 bits (54), Expect(4) = 2e-013
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / +1
Query: 890 YTWNMGSTQRTTS 852
YTWNMG+ QR S
Sbjct: 475 YTWNMGTVQRKVS 513
>gb|CW439870.1|CW439870 fsbb001f158d16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f158d16, DNA
sequence
Length = 520
Score = 58.8 bits (122), Expect(3) = 5e-025
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +1 / +1
Query: 853 DVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAV 1032
+ LC +PMFHVY L + + GA +V++ +++ M + +G+T +PLV PI V
Sbjct: 1 ETFLCTVPMFHVYGLVAFATGLLGCGATIVVLSKYELPEMLRSINEYGVTYLPLVPPILV 180
Query: 1033 EMV 1041
M+
Sbjct: 181 AML 189
Score = 50.1 bits (103), Expect(3) = 5e-025
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +1 / +1
Query: 1246 GACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKG 1368
G G + N E KI+DPETG +L N+ GE+ IRG +MKG
Sbjct: 379 GTAGLLSPNTEAKIVDPETGEALPVNRTGELWIRGPYVMKG 501
Score = 46.0 bits (94), Expect(3) = 5e-025
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +1 / +1
Query: 1069 LSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEA 1188
L ++R V+SG AP+ KEL + + K P+ + QGYG+TE+
Sbjct: 211 LGNLRKVLSGGAPLSKELIEGFKEKYPQVEILQGYGLTES 330
Score = 35.4 bits (71), Expect(3) = 4e-009
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -1 / -2
Query: 1365 FHQLLAPDANLPGLVAVEGQPGLRVDDL*LGI 1270
FH + PD L G V + GLRVDDL LG+
Sbjct: 498 FHDVWPPDPELAGAVHRQCLAGLRVDDLSLGV 403
Score = 32.7 bits (65), Expect(3) = 4e-009
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -1 / -2
Query: 1038 HLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHG 874
H DG+HER D V + +H + + A A + +G + V VEHG
Sbjct: 186 HGDEDGRHEREVGDPVFIDGAQHLGELVLGEHDDGGAAAEQPRGEGDKAVDVEHG 22
Score = 32.2 bits (64), Expect(3) = 4e-009
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -2 / -3
Query: 1184 SVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMR 1080
SV P PC + G + + S SSL GA PE T+R
Sbjct: 326 SVSPYPCRISTCGYFSLNPSMSSLLSGAPPESTLR 222
>gb|CW353056.1|CW353056 fsbb001f015k03f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f015k03, DNA
sequence
Length = 665
Score = 76.2 bits (160), Expect(2) = 2e-024
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +1 / -1
Query: 1672 VAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLASG 1791
V QVVFYK++HK+FF E+IPK PSGKILRKDLRA+LA+G
Sbjct: 296 VMLQVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAG 177
Score = 62.9 bits (131), Expect(2) = 2e-024
Identities = 25/37 (67%), Positives = 32/37 (86%)
Frame = +1 / -1
Query: 1576 VQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQV 1686
++MKDD GEIPVAF+V + GS +TEDEIKQ+VAK+V
Sbjct: 566 LRMKDDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 456
Score = 57.9 bits (120), Expect(2) = 7e-015
Identities = 27/45 (60%), Positives = 30/45 (66%)
Frame = -2 / +1
Query: 1802 PLENPDASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATY 1668
P P AS AL+SFL+ILPDG LGM S KK L L* TTC T+
Sbjct: 166 PQ*TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTCSITF 300
Score = 50.6 bits (104), Expect = 9e-005
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = -1 / +3
Query: 1773 SQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDP 1642
SQ+LP*+LAG LGDG EE+LV LVE+HL ++ + DP
Sbjct: 195 SQVLP*DLAGRVLGDGFSEENLVDLLVENHLQHYIYIRFQSQDP 326
Score = 48.7 bits (100), Expect(2) = 7e-015
Identities = 23/35 (65%), Positives = 23/35 (65%)
Frame = -2 / +1
Query: 1685 TCFATYCLISSSVIPEPPDATTNATGISPQESSFI 1581
T AT CLISSSV EP T ATGISP SSFI
Sbjct: 457 TSLATNCLISSSVTSEPSVRTMKATGISPARSSFI 561
Score = 43.2 bits (88), Expect(2) = 3e-008
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / +2
Query: 1780 ALLSDPSLKSCRMAPWGWPPRRRSCAASC 1694
A LS PSL SCR WGW R+ C +SC
Sbjct: 188 AWLSSPSLGSCRTGSWGWIQ*RKPCGSSC 274
Score = 40.9 bits (83), Expect(2) = 3e-008
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = -1 / +3
Query: 1686 HLFRHVLLDLVLGDPGAAGRHDERHRDLAAGVILH 1582
+L LLDL+LGD A G HDE RD + +ILH
Sbjct: 456 YLLGDKLLDLILGDFRAFGPHDEGDRDFTSKIILH 560
Score = 40.5 bits (82), Expect = 0.092
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = +3 / -3
Query: 1683 GGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKA 1781
GG LQE Q L HPQ +RQD KEG ES+A
Sbjct: 285 GGFLQEDPQGFLH*IHPQEPVRQDPKEGLESQA 187
>gb|CW208270.1|CW208270 104_637_11188585_116_37043_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11188585, DNA
sequence
Length = 625
Score = 69.3 bits (145), Expect(2) = 2e-024
Identities = 29/65 (44%), Positives = 45/65 (69%)
Frame = +1 / +3
Query: 1579 QMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKIL 1758
++ D+ GE+P + VV G+ +E ++ YVA++V YK+L + FV+AIPK+ SGKIL
Sbjct: 177 RLPDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKIL 356
Query: 1759 RKDLR 1773
R+ LR
Sbjct: 357 RRQLR 371
Score = 65.7 bits (137), Expect(2) = 2e-024
Identities = 26/32 (81%), Positives = 31/32 (96%)
Frame = +1 / +1
Query: 1480 LKELIKYKGFQVAPAELEAMLIAHPSIVDAAV 1575
+KELIKYKGFQVAPAELEA+L++HPS+ DAAV
Sbjct: 1 IKELIKYKGFQVAPAELEAILLSHPSVEDAAV 96
Score = 51.5 bits (106), Expect(2) = 2e-009
Identities = 27/63 (42%), Positives = 36/63 (57%)
Frame = -2 / -1
Query: 1775 ALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQ 1596
+L +ILPD LGMAST + S L + T ATY ++S+S+ P TT+ G SP
Sbjct: 373 SLSCLRRILPDTDLGMASTNRSSRSFLYDATRSATYAIMSASLSGAPRRRTTHDAGTSPA 194
Query: 1595 ESS 1587
SS
Sbjct: 193 SSS 185
Score = 50.1 bits (103), Expect(2) = 4e-006
Identities = 25/61 (40%), Positives = 33/61 (54%)
Frame = -1 / -3
Query: 1782 QLCSQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDL 1603
++ ++ P +LAG RLGDG+HE + LV H RHV + L A H R RDL
Sbjct: 380 EVVPELPPQDLAGHRLGDGVHEPQQPELLVRRHALRHVRHHVRLALRRATTPHHARRRDL 201
Query: 1602 A 1600
A
Sbjct: 200 A 198
Score = 40.5 bits (82), Expect(2) = 0.003
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3 / +2
Query: 1668 VRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESK 1778
VRG GV+QEA +RG HPQ +RQD E ++ +
Sbjct: 266 VRGGARGVVQEAPAAAVRGRHPQVGVRQDPAEAAQGR 376
Score = 35.0 bits (70), Expect = 4.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3 / -2
Query: 1762 SLKSCRMAPWGWPPRRRSCAASC 1694
S SCR WGW PR + ASC
Sbjct: 360 SAGSCRTPTWGWRPRTAAAGASC 292
Score = 32.7 bits (65), Expect(2) = 2e-009
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = -2 / -3
Query: 1574 TAASTMLGWXXXXXXXXXXATWNPLYLMSSL 1482
TAAS+ G ATW PLYLMSSL
Sbjct: 95 TAASSTDG*DRRMASSSAGATWKPLYLMSSL 3
Score = 26.7 bits (52), Expect(2) = 4e-006
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -3 / -1
Query: 1537 WPRAPPERLGTPCT**AP* 1481
WP A G+PCT**AP*
Sbjct: 58 WPPARQGPPGSPCT**AP* 2
Score = 26.3 bits (51), Expect(2) = 0.003
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / +3
Query: 1482 QGAHQVQGVP 1511
QGAHQVQG+P
Sbjct: 3 QGAHQVQGLP 32
>gb|CW140602.1|CW140602 104_531_11135871_148_34920_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135871, DNA
sequence
Length = 506
Score = 75.8 bits (159), Expect(2) = 4e-024
Identities = 33/55 (60%), Positives = 39/55 (70%)
Frame = +1 / -1
Query: 394 GGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVITE 558
G VM LL N EFA FL +RLGAA TTANP +TP EI +QA A+GA V++TE
Sbjct: 503 GDVVMNLLRNCPEFAFTFLGAARLGAATTTANPFYTPHEIHRQAEAAGAKVIVTE 339
Score = 61.6 bits (128), Expect(2) = 4e-024
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1 / -1
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQLV 816
LPYSSGTTGLPKGVML+HR L+TSVAQ V
Sbjct: 179 LPYSSGTTGLPKGVMLTHRSLITSVAQQV 93
Score = 51.9 bits (107), Expect(3) = 3e-016
Identities = 28/55 (50%), Positives = 32/55 (58%)
Frame = -2 / +1
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPP 393
SV T+AP A+A IS GV +GLAVV AAP R RN ANS + IT P
Sbjct: 340 SVTMTLAPAASAWRWISCGV*NGLAVVVAAPSRAAPRNVKANSGQLRSRFITTSP 504
Score = 40.5 bits (82), Expect(3) = 3e-016
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -2 / +1
Query: 815 TSCATLVTSPRCDSITPLGSPVVPDEYG 732
T CATLV R S+TPLG PVVP+E G
Sbjct: 94 TCCATLVMRLRWVSMTPLGRPVVPEE*G 177
Score = 32.7 bits (65), Expect(3) = 3e-016
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / +3
Query: 660 GGSEVGERDAALCAVARGDDGDA 592
GG GE DAA+ A GDDGDA
Sbjct: 228 GGDHGGELDAAVEAAVDGDDGDA 296
>gb|BI211968.1|BI211968 IP1_62_G05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 527
Score = 59.7 bits (124), Expect(3) = 3e-023
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +1 / +1
Query: 1240 KSGACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGY 1371
K + G ++ N E+K +DP+TG SL +N PGEIC+R + +M+GY
Sbjct: 394 KKKSVGFILPNLEVKFVDPDTGRSLPKNTPGEICVRSQAVMQGY 525
Score = 56.5 bits (117), Expect(3) = 3e-023
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1 / +1
Query: 874 PMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAVEMVKSDA 1053
P FH+Y + I +R +V+M RFD + H + P+V PI + MVKS
Sbjct: 10 PFFHIYGITGICCATLRHKGTVVVMDRFDLRGFLGALLTHKVMFAPVVPPIMLAMVKSPV 189
Query: 1054 IDRHDLSSVRM 1086
D DLS + +
Sbjct: 190 ADEFDLSGLAL 222
Score = 45.1 bits (92), Expect(2) = 6e-006
Identities = 23/67 (34%), Positives = 30/67 (44%)
Frame = -1 / -3
Query: 1074 REVVAVDGVALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQ 895
R+V V AL H D +H+ + D V + + A VEA+HDH R D
Sbjct: 210 RQVELVGHGALHHGQHDRRHDGREHDFVRQQRAQEAAQVEAVHDHHRALVPQRGAADAGD 31
Query: 894 RVHVEHG 874
V VE G
Sbjct: 30 AVDVEEG 10
Score = 32.7 bits (65), Expect(3) = 3e-023
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1 / +1
Query: 1075 SVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTE 1185
++R V++ AAP+ EL K P + + YG+TE
Sbjct: 217 ALRSVMTAAAPLAPELLAAFERKFPGVQVEEAYGLTE 327
Score = 30.9 bits (61), Expect(2) = 6e-006
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1 / -3
Query: 1371 VPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGI 1270
V H LAP A+LPG V + P +RV +L L +
Sbjct: 525 VALHHGLAPHADLPGRVLGQRPPRVRVHELHLQV 424
>gb|CN139882.1|CN139882 OX1_24_E09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_E09_A002 5', mRNA sequence
Length = 781
Score = 84.5 bits (178), Expect(2) = 5e-023
Identities = 31/67 (46%), Positives = 52/67 (77%)
Frame = +1 / +3
Query: 1588 DDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKD 1767
D GE+P+A+VV S S +TE ++++++ KQV +YK+L ++ FV+++PK+ SGKILR++
Sbjct: 126 DAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRE 305
Query: 1768 LRAKLAS 1788
L AK+ S
Sbjct: 306 LIAKVRS 326
Score = 51.9 bits (107), Expect = 3e-005
Identities = 28/67 (41%), Positives = 35/67 (52%)
Frame = -2 / -1
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATG 1608
D + A+ S LKI P+ G STK L + L* TCF+ S+SV D TT A G
Sbjct: 325 DLTLAISSLLKIFPEADFGTLSTKVTLLNFL*YATCFSINFWTSTSVKELTGDLTT*AIG 146
Query: 1607 ISPQESS 1587
SP +S
Sbjct: 145 TSPASAS 125
Score = 46.0 bits (94), Expect(2) = 5e-023
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +1 / +1
Query: 1501 KGFQVAPAELEAMLIAHPSIVDAAVV 1578
KGFQ+AP ELE +L++HP I+DA V+
Sbjct: 22 KGFQIAPFELEGLLLSHPEILDAVVI 99
>gb|CW445621.1|CW445621 fsbb001f170n20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f170n20, DNA
sequence
Length = 679
Score = 70.7 bits (148), Expect(3) = 6e-023
Identities = 25/35 (71%), Positives = 31/35 (88%)
Frame = +1 / -1
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQV 1515
+GWLHTGD+GY D+ ++ +VDRLKELIKYKGFQV
Sbjct: 634 QGWLHTGDLGYFDERGQLHVVDRLKELIKYKGFQV 530
Score = 52.4 bits (108), Expect = 2e-005
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = -2 / +3
Query: 1514 TWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHP 1413
TW PLYL+SSLS ST SS YP SPVC+HP
Sbjct: 531 TWKPLYLISSLSLSTT*SWPLSSKYPRSPVCNHP 632
Score = 43.2 bits (88), Expect(3) = 6e-023
Identities = 15/24 (62%), Positives = 22/24 (91%)
Frame = +1 / -1
Query: 1507 FQVAPAELEAMLIAHPSIVDAAVV 1578
+Q+APAELE +L++HP I+DAAV+
Sbjct: 361 WQIAPAELEGLLLSHPEILDAAVI 290
Score = 40.0 bits (81), Expect(3) = 6e-023
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1 / -2
Query: 1588 DDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKR 1701
D GE+P+A+VV S S + E ++++++ KQV+ R
Sbjct: 201 DPEAGEVPIAYVVRSPKSSLAEVDVQKFIEKQVMLASR 88
>gb|CX617895.1|CX617895 GABR1_36_B02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_36_B02_A002 5', mRNA sequence
Length = 538
Score = 76.7 bits (161), Expect(2) = 7e-023
Identities = 34/73 (46%), Positives = 44/73 (60%)
Frame = +1 / +2
Query: 157 MVSPTEPQAETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDV 336
M P + VFRS LPDI I + L Y + +E DRACLIDG TG + T+ +V
Sbjct: 128 MPEPEAEENAAVVFRSKLPDIEINNSQSLQTYCFGKTSEVADRACLIDGQTGASYTYAEV 307
Query: 337 DRLSRRVAAGMRA 375
+ LSRR A+G+RA
Sbjct: 308 ESLSRRAASGLRA 346
Score = 53.3 bits (110), Expect(2) = 7e-023
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +1 / +3
Query: 445 FLACSRLGAAATTANPLHTPPEIAKQAAASGATVVITE 558
FL +RLGAA TTA +TP EI +QA A+GA V++TE
Sbjct: 414 FLGAARLGAATTTAKAFYTPHEIHRQAEAAGAKVIVTE 527
Score = 35.9 bits (72), Expect(2) = 0.18
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -2 / -1
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHAR 447
SV T+AP A+A IS GV + LAVV AAP R R
Sbjct: 526 SVTMTLAPAASAWRWISCGV*NALAVVVAAPSRAAPR 416
Score = 24.4 bits (47), Expect(2) = 0.18
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2 / -2
Query: 221 AMSGSVERNTVVSACGSVGDTI 156
+MSGS+ERNT + + G I
Sbjct: 192 SMSGSLERNTTAAFSSASGSGI 127
>gb|CX609752.1|CX609752 ANR1_14_B11.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_14_B11_A002 5', mRNA sequence
Length = 756
Score = 82.2 bits (173), Expect(2) = 1e-022
Identities = 41/76 (53%), Positives = 47/76 (61%)
Frame = +1 / +1
Query: 340 RLSRRVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAK 519
RL R AA LGV G VM+LL NSVEF L FL S LGA T ANP TP EI K
Sbjct: 256 RLLCRKAAASLHGLGVGHGDRVMILLQNSVEFVLTFLGASFLGAVTTAANPFCTPLEIHK 435
Query: 520 QAAASGATVVITEPAF 567
Q ASGA +++T+ A+
Sbjct: 436 QFRASGAKLIVTQSAY 483
Score = 74.4 bits (156), Expect(2) = 6e-012
Identities = 32/62 (51%), Positives = 37/62 (59%)
Frame = +1 / +1
Query: 184 ETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAA 363
E TVFRS LPDI HLPLH+Y R AE D CLI ATG T T+ + L R+ AA
Sbjct: 103 EETVFRSKLPDIDFASHLPLHEYCFARAAEVADAPCLIAAATGRTYTYAETRLLCRKAAA 282
Query: 364 GM 369
+
Sbjct: 283 SL 288
Score = 64.3 bits (134), Expect(4) = 4e-020
Identities = 33/72 (45%), Positives = 38/72 (52%)
Frame = -2 / -2
Query: 554 VMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPRQ 375
V ++APEA CL IS GV +GLA V APR + R S NSTEF +T P TP
Sbjct: 470 VTMSLAPEALNCLWISSGVQNGLAAVVTAPRNDAPRKVSTNSTEFWSRIMTRSPWPTPSP 291
Query: 374 ARIPAATRRDRR 339
AA R R
Sbjct: 290 CSDAAALRHRSR 255
Score = 51.0 bits (105), Expect(2) = 1e-022
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +1 / +1
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQ 810
LP+SSGTTGLPKGV+L+H G V++VAQ
Sbjct: 673 LPFSSGTTGLPKGVVLTHGGQVSNVAQ 753
Score = 43.7 bits (89), Expect(4) = 4e-020
Identities = 19/26 (73%), Positives = 19/26 (73%)
Frame = -2 / -2
Query: 809 CATLVTSPRCDSITPLGSPVVPDEYG 732
CATL T P S TPLGSPVVPDE G
Sbjct: 752 CATLDTCPPWVSTTPLGSPVVPDENG 675
Score = 34.5 bits (69), Expect = 5.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1 / -1
Query: 804 HAGYQPTVRQHHPLGQPRRA 745
H G+ P V +HH LGQPR A
Sbjct: 747 HVGHLPAVGEHHALGQPRGA 688
Score = 24.4 bits (47), Expect(4) = 4e-020
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1 / -1
Query: 669 IVGGGSEVGERDAALCAVARGDDGDAGE 586
+VGG ++ E AA V DG+ GE
Sbjct: 627 VVGGRDQLPEGQAAFRGVGHVVDGEDGE 544
Score = 22.6 bits (43), Expect(2) = 6e-012
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 735 VLVRHDGAAQGGDA 776
VLV H GAAQG A
Sbjct: 678 VLVGHHGAAQGRGA 719
Score = 22.6 bits (43), Expect(4) = 4e-020
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2 / -2
Query: 221 AMSGSVERNTVVS 183
+MSGS +RNTV S
Sbjct: 140 SMSGSFDRNTVSS 102
>gb|CW464152.1|CW464152 fsbb001f213e01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f213e01, DNA
sequence
Length = 646
Score = 98.2 bits (208), Expect(2) = 1e-021
Identities = 39/105 (37%), Positives = 66/105 (62%)
Frame = +1 / -2
Query: 853 DVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAV 1032
+V LC LPMFH++ L + M+ G ++V+M RFD + V+RH +T + V P+ +
Sbjct: 549 NVFLCFLPMFHIFGLSVLTFAQMQRGNSVVVMSRFDMDSVMAAVQRHRVTHLFCVPPVMI 370
Query: 1033 EMVKSDAIDRHDLSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQ 1167
+ K ++ ++DLSS+R + SGAAP+GK++ + + P AV+ Q
Sbjct: 369 ALAKLGSVGKYDLSSLRFIGSGAAPLGKDVMEGVAKNFPEAVIAQ 235
Score = 55.1 bits (114), Expect = 4e-006
Identities = 32/99 (32%), Positives = 43/99 (43%)
Frame = -1 / +1
Query: 1167 LSEHGARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGVALDHLHRDGQHERHDRDAVP 988
L HG ++ + +LA R R D R EVV D L + D +H D VP
Sbjct: 235 LGNHGFWKVLGHALHHVLAERRCARADEPERAEVVFPDTPELGERYHDRRHAEEVSDTVP 414
Query: 987 LHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHGQ 871
LH H V+ H + A H +++ Q VEHGQ
Sbjct: 415 LHGGHHRVHVKP*HHDDGVATLHLREREDGQAEDVEHGQ 531
Score = 39.6 bits (80), Expect = 0.17
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = -2 / +2
Query: 1157 TARGSLARSRSCSSLPMGAAPEMTMRTDERSWRSMASLLTISTAMGSTSGTIVMPCLFTS 978
TA G + S +SLP GAAPE ++ RS+ L + G T V C T+
Sbjct: 245 TASGKFLATPSITSLPSGAAPEPMNLSELRSYFPTLPSLASAIMTGGTQKR*VTRCRCTA 424
Query: 977 SNMRRVSKRFMITSAAP 927
+ +S R + T+ P
Sbjct: 425 AITESMSNRDITTTELP 475
Score = 27.6 bits (54), Expect(2) = 1e-021
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1 / -2
Query: 751 TGLPKGVMLSHRGLVTSVAQL 813
TG KGV+L+HR +++ A +
Sbjct: 645 TGASKGVILTHRNFISAAAMM 583
>gb|CW448537.1|CW448537 fsbb001f182d10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f182d10, DNA
sequence
Length = 578
Score = 75.3 bits (158), Expect(2) = 2e-021
Identities = 27/35 (77%), Positives = 32/35 (91%)
Frame = +1 / +1
Query: 814 VDGDNPNLHFREDDVVLCVLPMFHVYSLHSILLCG 918
VDG+NPNLHF DDVVLCVLP+FH+YSL+S+LL G
Sbjct: 346 VDGENPNLHFSSDDVVLCVLPLFHIYSLNSVLLAG 450
Score = 50.1 bits (103), Expect(2) = 2e-021
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1 / +2
Query: 916 GMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLP 1023
G+RAG A+VIM++F+ + ELV+ HG+T+ P V P
Sbjct: 449 GLRAGCAIVIMRKFEIGALVELVRAHGVTVAPFVPP 556
Score = 46.0 bits (94), Expect(2) = 2e-009
Identities = 21/35 (60%), Positives = 21/35 (60%)
Frame = -2 / -1
Query: 917 PHSRMECSEYTWNMGSTQRTTSSSRKWRFGLSPST 813
P E SE WN GST TTSS K RFG SPST
Sbjct: 449 PARSTELSE*MWNSGSTHSTTSSLLKCRFGFSPST 345
Score = 38.6 bits (78), Expect(2) = 2e-009
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = -2 / -3
Query: 1022 GSTSGTIVMPCLFTSSNMRRVSKRFMITSAAPARIP 915
G T G V PC TSS +S MIT A PAR P
Sbjct: 555 GGTKGATVTPCARTSSTSAPISNLRMITMAHPARSP 448
Score = 37.3 bits (75), Expect = 0.85
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -1 / -2
Query: 1023 GQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHP 916
G+HE AV HQL +E HDH+ GA P
Sbjct: 556 GRHEGRHGHAVRAHQLHQRADLELAHDHDGAPGAQP 449
>gb|CW339592.1|CW339592 104_840_11485351_116_36138_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485351, DNA
sequence
Length = 619
Score = 105 bits (225), Expect = 2e-021
Identities = 54/113 (47%), Positives = 66/113 (58%)
Frame = +1 / +1
Query: 217 IAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAGMRACLGVRSG 396
IA L L D VL R A L+D ATG LTFG + AA + + GVR G
Sbjct: 226 IASDPGLSLADLVLRRAAACPSAPALVDAATGRALTFGSLRSAVLVAAAALSSRAGVRRG 405
Query: 397 GTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
V+LL PN V + + FLA + LGA ATTANP +TP EIAKQAA + A +V+T
Sbjct: 406 DAVLLLAPNCVLYPVCFLAVTSLGAVATTANPRYTPREIAKQAADARAKLVVT 564
Score = 63.8 bits (133), Expect = 8e-009
Identities = 33/67 (49%), Positives = 40/67 (59%)
Frame = -2 / -3
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPR 378
+V T++A +AACLAIS GV GLAVVA AP AR + ST+ G S T P RTP
Sbjct: 566 TVTTSLARASAACLAISRGV*RGLAVVATAPSEVTARKQTG*STQLGARSSTASPRRTPA 387
Query: 377 QARIPAA 357
+ AA
Sbjct: 386 REESAAA 366
>gb|BZ329364.1|BZ329364 hv85d06.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hv85d06 5', DNA sequence
Length = 658
Score = 105 bits (224), Expect = 2e-021
Identities = 47/110 (42%), Positives = 65/110 (59%)
Frame = +1 / +2
Query: 1324 QPGEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYK 1503
QPGEI IRG Q+M GY P+ TAK + +G+ TGDIG +D IVDR K++I
Sbjct: 131 QPGEIAIRGPQVMPGYWQRPDETAKVMTPDGFFKTGDIGVMDAQGYTKIVDRKKDMILVS 310
Query: 1504 GFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITE 1653
GF V P E+E ++ HP++++ A V + D+ GE FVV S +E
Sbjct: 311 GFNVYPNEIEGVVAQHPAVLECACVGVPDEHTGEAVKLFVVRKDKSLTSE 460
Score = 69.3 bits (145), Expect = 2e-010
Identities = 47/128 (36%), Positives = 58/128 (45%)
Frame = -2 / -2
Query: 1661 ISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSL 1482
IS S++ + TT + SP SS T A S+ G T P + S
Sbjct: 468 ISCSLVSDLSLRTTKSLTASPVCSSGTPTQAHSSTAGCCATTPSISXG*TLKPETRIMSF 289
Query: 1481 SRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISPGWLRWRDSP 1302
RST+ + +S PMSPV PS M AV+SG + P I C P M ISPGW P
Sbjct: 288 LRSTILV*PCASITPMSPVLKKPSGVMTLAVSSGRCQ*PGITCGPRMAISPGWPSGTGWP 109
Query: 1301 VSGSMIFS 1278
S M S
Sbjct: 108 SSSRMAIS 85
Score = 36.8 bits (74), Expect = 1.2
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1 / +2
Query: 1612 VAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
V V +T +++ Y +Q YK+ I F + +PK G ILR++LR
Sbjct: 416 VKLFVVRKDKSLTSEQLMAYCKEQFTGYKKPKYIEFRDELPKTNVGXILRRELR 577
>gb|CW273594.1|CW273594 104_746_11403983_116_35364_094 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403983, DNA
sequence
Length = 267
Score = 94.5 bits (200), Expect(3) = 3e-021
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = +1 / +1
Query: 187 TTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGD 333
TTVFRST+PDIAIP+HLPLH+YVLE LAERRD CLI GATGE + F D
Sbjct: 121 TTVFRSTIPDIAIPNHLPLHNYVLESLAERRDCTCLIKGATGEMIMFSD 267
Score = 32.2 bits (64), Expect(4) = 3e-006
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 113 GVTCRRQEACCFRPG 69
G TC+ QE CCFR G
Sbjct: 53 GATCKSQEVCCFRVG 9
Score = 29.9 bits (59), Expect(2) = 5.0
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -1
Query: 114 WSYVQETRGLLLP 76
WSYVQE R LLLP
Sbjct: 54 WSYVQEPRSLLLP 16
Score = 25.8 bits (50), Expect(4) = 3e-006
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 221 AMSGSVERNTVV 186
AMSG VERNTVV
Sbjct: 155 AMSGIVERNTVV 120
Score = 24.9 bits (48), Expect(4) = 3e-006
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -3 / -1
Query: 136 VYVWRWRLE 110
V+VWRWRL+
Sbjct: 81 VHVWRWRLD 55
Score = 24.4 bits (47), Expect(3) = 3e-021
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / +1
Query: 70 PGRKQQASCLLHV 108
P RKQQ S LLHV
Sbjct: 10 PTRKQQTSWLLHV 48
Score = 23.5 bits (45), Expect(4) = 3e-006
Identities = 5/6 (83%), Positives = 5/6 (83%)
Frame = -2 / -1
Query: 74 PGWWSW 57
PGWW W
Sbjct: 18 PGWWRW 1
Score = 23.1 bits (44), Expect(3) = 3e-021
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = +2 / +1
Query: 110 LQPPAPHVHL 139
+QPPAPH+++
Sbjct: 55 IQPPAPHMNM 84
Score = 22.1 bits (42), Expect(2) = 5.0
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1 / -2
Query: 129 CGAGGW 112
CGAGGW
Sbjct: 74 CGAGGW 57
>gb|CW331180.1|CW331180 104_828_11480770_116_36026_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480770, DNA
sequence
Length = 683
Score = 69.3 bits (145), Expect(2) = 3e-021
Identities = 26/42 (61%), Positives = 36/42 (85%)
Frame = +1 / -1
Query: 1684 VVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLASGFSNGSS 1809
VVFYKR++++FF ++IPK PSGKILRKDLRA+LA+G + +
Sbjct: 248 VVFYKRINRVFFTDSIPKNPSGKILRKDLRARLAAGIPSSDN 123
Score = 58.8 bits (122), Expect(2) = 3e-021
Identities = 22/37 (59%), Positives = 32/37 (86%)
Frame = +1 / -3
Query: 1579 QMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVV 1689
+MKD+ GE+PVAF++ S GS I+E+EIKQ+VAK+V+
Sbjct: 582 RMKDELAGEVPVAFIIRSEGSEISENEIKQFVAKEVI 472
Score = 53.8 bits (111), Expect(2) = 4e-013
Identities = 26/44 (59%), Positives = 30/44 (68%)
Frame = -2 / +1
Query: 1790 PDASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLI 1659
P AS ALRSFL+ILP+G GM S KK L LL*NTT + +I
Sbjct: 142 PAASRALRSFLRILPEGFFGMESVKKTLLILL*NTTYYIVETVI 273
Score = 46.9 bits (96), Expect(2) = 4e-013
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -2 / +2
Query: 1685 TCFATYCLISSSVIPEPPDATTNATGISPQESSFI 1581
T FAT CLIS S+I EP NATG SP SSFI
Sbjct: 476 TSFATNCLISFSLISEPSLRIMNATGTSPASSSFI 580
Score = 43.7 bits (89), Expect = 0.010
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -1 / +3
Query: 1773 SQILP*NLAGWRLGDGLHEEDLVQPLVEHHL 1681
SQ+LP NLAG L +G+ EE+ V PLVEH L
Sbjct: 159 SQVLPKNLAGGILRNGIREENSVDPLVEHDL 251
Score = 36.3 bits (73), Expect = 1.6
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +3 / -3
Query: 1683 GGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKA 1781
G VLQE Q L G H + ++RQD EG ES A
Sbjct: 249 GRVLQEDQQSFLHGFHSEESLRQDS*EGPESAA 151
>gb|CW351984.1|CW351984 fsbb001f014a08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f014a08, DNA
sequence
Length = 656
Score = 105 bits (223), Expect = 3e-021
Identities = 40/85 (47%), Positives = 66/85 (77%)
Frame = +1 / -2
Query: 913 CGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAVEMVKSDAIDRHDLSSVRMVI 1092
C +RAGAA+++M +F+ M E ++R +T+ +V P+ + + K+ A++++DLSS+R+V+
Sbjct: 655 CALRAGAAVMLMPKFEMGAMLEGIQRWRVTVAAVVPPLVLALAKNPALEKYDLSSIRIVL 476
Query: 1093 SGAAPMGKELQDLLRAKLPRAVLGQ 1167
SGAAP+GKEL D LRA++P+AV GQ
Sbjct: 475 SGAAPLGKELVDALRARVPQAVFGQ 401
Score = 71.6 bits (150), Expect = 4e-011
Identities = 36/85 (42%), Positives = 49/85 (57%)
Frame = -2 / +3
Query: 1166 CPSTARGSLARSRSCSSLPMGAAPEMTMRTDERSWRSMASLLTISTAMGSTSGTIVMPCL 987
CP TA G+ ARS S SSLP GAAPE T+R + RS+ S A L ++ G T+ V
Sbjct: 402 CPKTACGTRARSASTSSLPSGAAPESTIRMELRSYFSSAGFLAKASTSGGTTAATVTRHR 581
Query: 986 FTSSNMRRVSKRFMITSAAPARIPH 912
+ S++ +S + +AAPAR H
Sbjct: 582 WMPSSIAPISNLGISITAAPARSAH 656
Score = 59.3 bits (123), Expect = 2e-007
Identities = 32/85 (37%), Positives = 41/85 (48%)
Frame = -1 / +2
Query: 1167 LSEHGARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGVALDHLHRDGQHERHDRDAVP 988
LSE G GA++V +LLA RG + EVV + L +H+ RDA P
Sbjct: 401 LSEDGLWHAGAERVDELLAKRRGAGEHDPDGTEVVLLQRGVLGQGEHQRRHDGGHRDAPP 580
Query: 987 LHQLEHAESVEALHDHERRAGAHPA 913
L L+H +E H H RRAG A
Sbjct: 581 LDALQHRAHLELGHQHHRRAGTQRA 655
>gb|CN152126.1|CN152126 WOUND1_80_A04.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_80_A04_A002 3', mRNA sequence
Length = 681
Score = 104 bits (222), Expect = 4e-021
Identities = 38/84 (45%), Positives = 64/84 (76%)
Frame = +1 / +2
Query: 1537 MLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIF 1716
+L++HP I+DA V+ D GE+P+A+VV S S +TE ++++++ KQV +YK+L ++
Sbjct: 5 LLLSHPEILDAVVIPFPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVAYYKKLRRVT 184
Query: 1717 FVEAIPKAPSGKILRKDLRAKLAS 1788
FV+++PK+ SGKILR++L AK+ S
Sbjct: 185 FVDSVPKSASGKILRRELIAKVRS 256
Score = 55.6 bits (115), Expect = 3e-006
Identities = 32/79 (40%), Positives = 40/79 (50%)
Frame = -2 / -1
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATG 1608
D + A+ S LKI P+ G STK L + L* TCF+ S+SV D TT A G
Sbjct: 255 DLTLAISSLLKIFPEADFGTLSTKVTLLNFL*YATCFSINFWTSTSVKELTGDLTT*AIG 76
Query: 1607 ISPQESSFIWTTAASTMLG 1551
SP +S T AS + G
Sbjct: 75 TSPASASGNGITTASRISG 19
>gb|CW471409.1|CW471409 fsbb001f225e14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f225e14, DNA
sequence
Length = 182
Score = 104 bits (221), Expect = 6e-021
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +1 / +2
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKG 1506
GYLNNPEATAKTID EGWLHTGD+GYV D DEIFI DRL+ELIKYKG
Sbjct: 38 GYLNNPEATAKTIDHEGWLHTGDVGYVYDDDEIFIGDRLRELIKYKG 178
Score = 92.7 bits (196), Expect = 2e-017
Identities = 41/48 (85%), Positives = 42/48 (87%)
Frame = -2 / -3
Query: 1508 NPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYP 1365
+PLYLMSSLS S MKISS S TYP SPVCSHPS SMVFAVASGLLRYP
Sbjct: 180 HPLYLMSSLSLSPMKISSSS*TYPTSPVCSHPSWSMVFAVASGLLRYP 37
Score = 51.9 bits (107), Expect(2) = 1e-006
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = -3 / -1
Query: 1441 TQCLRCAATPPSRWSSPLPPGC*GTL 1364
TQ LRCAAT RWSSP PPGC*GTL
Sbjct: 113 TQRLRCAATLHGRWSSPWPPGC*GTL 36
Score = 49.6 bits (102), Expect = 2e-004
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -1 / -2
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVP 1366
NVSGVQPP VDGLRR LRVVEVP
Sbjct: 109 NVSGVQPPFMVDGLRRGLRVVEVP 38
Score = 39.1 bits (79), Expect(2) = 8e-004
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +3 / +1
Query: 1365 RVPQQPGGNGEDHRLGGVAA 1424
RVPQQPGG+GEDHR VAA
Sbjct: 37 RVPQQPGGHGEDHRP*RVAA 96
Score = 26.3 bits (51), Expect(2) = 8e-004
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / +1
Query: 1479 AQGAHQVQGV 1508
AQGAHQVQGV
Sbjct: 151 AQGAHQVQGV 180
Score = 23.1 bits (44), Expect(2) = 1e-006
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 1507 TPCT**AP*A 1478
TPCT**AP*A
Sbjct: 179 TPCT**AP*A 150
>gb|CX612469.1|CX612469 GABR1_2_D03.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_2_D03_A002 5', mRNA sequence
Length = 740
Score = 80.8 bits (170), Expect(2) = 2e-020
Identities = 40/76 (52%), Positives = 47/76 (61%)
Frame = +1 / +1
Query: 340 RLSRRVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAK 519
RL R AA LGV G VM+LL NSVEF L FL S LGA T ANP TP EI +
Sbjct: 253 RLLCRKAAASLHGLGVGHGDRVMILLQNSVEFVLTFLGASFLGAVTTAANPFCTPLEIHR 432
Query: 520 QAAASGATVVITEPAF 567
Q ASGA +++T+ A+
Sbjct: 433 QFKASGAKLIVTQSAY 480
Score = 76.2 bits (160), Expect(2) = 2e-012
Identities = 33/62 (53%), Positives = 38/62 (61%)
Frame = +1 / +1
Query: 184 ETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAA 363
E TVFRS LPDI I HLPLH+Y R AE D CLI ATG T T+ + L R+ AA
Sbjct: 100 EETVFRSKLPDIDIASHLPLHEYCFARAAEVADAPCLIAAATGRTYTYAETRLLCRKAAA 279
Query: 364 GM 369
+
Sbjct: 280 SL 285
Score = 64.3 bits (134), Expect(4) = 1e-017
Identities = 33/72 (45%), Positives = 38/72 (52%)
Frame = -2 / -1
Query: 554 VMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPRQ 375
V ++APEA CL IS GV +GLA V APR + R S NSTEF +T P TP
Sbjct: 467 VTMSLAPEALNCLWISSGVQNGLAAVVTAPRNDAPRKVSTNSTEFWSRIMTRSPWPTPSP 288
Query: 374 ARIPAATRRDRR 339
AA R R
Sbjct: 287 CSDAAALRHRSR 252
Score = 44.6 bits (91), Expect(2) = 2e-020
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +1 / +1
Query: 730 LPYSSGTTGLPKGVMLSHRGLVT 798
LP+SSGTTGLPKGV+L+H G V+
Sbjct: 670 LPFSSGTTGLPKGVVLTHGGQVS 738
Score = 35.4 bits (71), Expect(4) = 1e-017
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = -2 / -1
Query: 800 LVTSPRCDSITPLGSPVVPDEYG 732
L T P S TPLGSPVVPDE G
Sbjct: 740 LDTCPPWVSTTPLGSPVVPDENG 672
Score = 24.4 bits (47), Expect(4) = 1e-017
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1 / -3
Query: 669 IVGGGSEVGERDAALCAVARGDDGDAGE 586
+VGG ++ E AA V DG+ GE
Sbjct: 624 VVGGRDQLPEGQAAFRGVGHVVDGEDGE 541
Score = 22.6 bits (43), Expect(2) = 2e-012
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 735 VLVRHDGAAQGGDA 776
VLV H GAAQG A
Sbjct: 675 VLVGHHGAAQGRGA 716
Score = 22.6 bits (43), Expect(4) = 1e-017
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2 / -1
Query: 221 AMSGSVERNTVVS 183
+MSGS +RNTV S
Sbjct: 137 SMSGSFDRNTVSS 99
>gb|CW188089.1|CW188089 104_607_11172835_148_36722_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11172835, DNA
sequence
Length = 657
Score = 63.8 bits (133), Expect(2) = 3e-020
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = +1 / +1
Query: 436 ALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVITE 558
A FL +RLGAA TTANP +TP EI +QAAA+GA V++TE
Sbjct: 1 AFVFLGAARLGAATTTANPFYTPHEIHRQAAAAGAKVIVTE 123
Score = 61.1 bits (127), Expect(2) = 3e-020
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1 / +1
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQLV 816
LPYSSGTTG+PKGVML+HR LVTSVAQ V
Sbjct: 289 LPYSSGTTGMPKGVMLTHRSLVTSVAQQV 375
Score = 47.8 bits (98), Expect(2) = 2e-009
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -2 / -2
Query: 815 TSCATLVTSPRCDSITPLGSPVVPDEYG 732
T CATLVT RC S+TPLG PVVP+E G
Sbjct: 374 TCCATLVTRLRCVSMTPLGIPVVPEE*G 291
Score = 40.0 bits (81), Expect(2) = 2e-009
Identities = 22/37 (59%), Positives = 24/37 (64%)
Frame = -2 / -2
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHAR 447
SV T+AP AAA IS GV +GLAVV AAP R R
Sbjct: 122 SVTITLAPAAAAWRWISCGV*NGLAVVVAAPSRAAPR 12
>gb|CX613072.1|CX613072 GABR1_6_C10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_6_C10_A002 3', mRNA sequence
Length = 762
Score = 96.4 bits (204), Expect(2) = 7e-020
Identities = 42/104 (40%), Positives = 63/104 (60%)
Frame = +1 / +1
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGF 1509
GEI +RG +M GYLN+ +A I +GW +TGD+G + + I DR K++I G
Sbjct: 112 GEIVLRGGCVMLGYLNDDKAAGAAIREDGWFYTGDVGVMHPDGYMEICDRSKDVIISGGE 291
Query: 1510 QVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGS 1641
++ E+E++L +HP++ +AAVV DD GE P AFV G+
Sbjct: 292 NISSVEVESVLYSHPAVNEAAVVARPDDFWGETPCAFVGLKEGA 423
Score = 68.0 bits (142), Expect = 5e-010
Identities = 37/103 (35%), Positives = 50/103 (48%)
Frame = -2 / -2
Query: 1637 PPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKIS 1458
P + TNA G+SPQ+SS TTAAS GW ++P +++SL RS + +
Sbjct: 419 PSLSPTNAHGVSPQKSSGRATTAASFTAGWL*STDSTSTLLMFSPPLMITSLDRSQISMY 240
Query: 1457 SPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
P SPV +HPS + A LR P + P ISP
Sbjct: 239 PSGCITPTSPV*NHPSSRIAAPAALSSLR*PSMTQPPRSTISP 111
Score = 23.5 bits (45), Expect(2) = 7e-020
Identities = 10/48 (20%), Positives = 23/48 (47%)
Frame = +1 / +1
Query: 1630 SGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
+ +T ++ + +++ Y + F + +PK +GKI + LR
Sbjct: 421 ASAGAVTAADVIAWCRQRMPHYMVPRTVVFRDELPKTSTGKIQKYVLR 564
>gb|BE592413.1|BE592413 WS1_94_D11.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 593
Score = 99.6 bits (211), Expect = 1e-019
Identities = 41/117 (35%), Positives = 67/117 (57%)
Frame = +1 / +1
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GW HTGDIG VD+ + +V R+KELI G +++P E++A+L+ P + A + DD
Sbjct: 88 GWFHTGDIGVVDEEGYVRLVGRIKELINRGGEKISPIEVDAVLLGAPGVAQAVSFGVPDD 267
Query: 1594 SCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRK 1764
GE V+ GS + E+E+ + + + +K K+F + +PK +GKI R+
Sbjct: 268 KYGEEINCAVIPRDGSALREEEVLAHCRRNLASFKVPKKVFITDDLPKTATGKIQRR 438
Score = 44.1 bits (90), Expect = 0.007
Identities = 29/85 (34%), Positives = 36/85 (42%)
Frame = -2 / -1
Query: 1658 SSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLS 1479
SSS +P T SP SS A G ++P LMSSL
Sbjct: 332 SSSRSADPSRGITAQLISSPYLSSGTPNDTACATPGAPSSTASTSIGEIFSPPRLMSSLI 153
Query: 1478 RSTMKISSPSSTYPMSPVCSHPSES 1404
R T + SST PMSPV +HP+ +
Sbjct: 152 RPTRRTYPSSSTTPMSPVWNHPNRN 78
>gb|CD424257.1|CD424257 SA1_4_H11.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_4_H11_A002 3', mRNA sequence
Length = 584
Score = 99.6 bits (211), Expect = 1e-019
Identities = 37/80 (46%), Positives = 60/80 (75%)
Frame = +1 / +1
Query: 1549 HPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEA 1728
HP I+DA V+ D GE+P+A+VV S S +TE ++++++ KQV +YK+L ++ FV++
Sbjct: 1 HPEILDAVVIPFPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVAYYKKLRRVPFVDS 180
Query: 1729 IPKAPSGKILRKDLRAKLAS 1788
+PK+ SGKILR++L AK+ S
Sbjct: 181 VPKSASGKILRRELIAKVRS 240
Score = 55.6 bits (115), Expect = 3e-006
Identities = 32/79 (40%), Positives = 40/79 (50%)
Frame = -2 / -1
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATG 1608
D + A+ S LKI P+ G STK L + L* TCF+ S+SV D TT A G
Sbjct: 239 DLTLAISSLLKIFPEADFGTLSTKGTLLNFL*YATCFSINFWTSTSVKELTGDLTT*AIG 60
Query: 1607 ISPQESSFIWTTAASTMLG 1551
SP +S T AS + G
Sbjct: 59 TSPASASGNGITTASRISG 3
>gb|CW165082.1|CW165082 104_573_11152317_148_36475_091 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11152317, DNA
sequence
Length = 575
Score = 58.3 bits (121), Expect(3) = 2e-019
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = +1 / +1
Query: 421 NSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
N V + + FLA + LGA ATTANP +TP EIAKQAA + A +V+T
Sbjct: 1 NCVLYPVCFLAVTSLGAVATTANPRYTPREIAKQAADARAKLVVT 135
Score = 47.3 bits (97), Expect(3) = 6e-008
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = -2 / -1
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTE 423
+V T++A +AACLAIS GV GLAVVA AP AR + ST+
Sbjct: 137 TVTTSLARASAACLAISRGV*RGLAVVATAPSEVTARKQTG*STQ 3
Score = 47.3 bits (97), Expect(3) = 2e-019
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +1 / +1
Query: 799 SVAQLVDGDNPNLHFREDDVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFD 960
+ A +V D L +V LC LPMFH++ + + L ++ G A+V+M RFD
Sbjct: 403 AAATMVTSDQDELGEGGRNVFLCFLPMFHIFGMAVVTLGQLQRGNAVVVMARFD 564
Score = 35.9 bits (72), Expect(3) = 2e-019
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1 / +1
Query: 736 YSSGTTGLPKGVMLSHRGLVTSVAQL 813
YSSGTTG KGV+L+HR + + +
Sbjct: 343 YSSGTTGESKGVVLTHRNFIAAATMV 420
Score = 31.8 bits (63), Expect(3) = 6e-008
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2 / -1
Query: 785 RCDSITPLGSPVVPDE 738
RC S TPL SPVVPDE
Sbjct: 392 RCVSTTPLLSPVVPDE 345
Score = 22.6 bits (43), Expect(3) = 6e-008
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -1 / -3
Query: 960 VEALHDHERRAGAHPAQQDGVQRVHVEHGQ 871
VE HD + A A+ D VEHGQ
Sbjct: 564 VEPGHDDDGVAALQLAEGDHGHAEDVEHGQ 475
>gb|BE363463.1|BE363463 WS1_63_B11.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 349
Score = 97.7 bits (207), Expect = 5e-019
Identities = 41/116 (35%), Positives = 65/116 (56%)
Frame = +1 / +2
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GW HTGDIG VD+ + V R+KELI G +++P E++A+L+ P + A + DD
Sbjct: 2 GWFHTGDIGVVDEEGYVRFVGRIKELINRGGEKISPIEVDAVLLGAPGVAQAVSFGVPDD 181
Query: 1594 SCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILR 1761
GE V+ GS + E+E+ + + + +K K+F + +PK +GKI R
Sbjct: 182 KYGEEINCAVIPRDGSALREEEVLAHCRRNLASFKVPKKVFITDDLPKTATGKIQR 349
Score = 43.2 bits (88), Expect = 0.014
Identities = 29/82 (35%), Positives = 34/82 (41%)
Frame = -2 / -2
Query: 1658 SSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLS 1479
SSS +P T SP SS A G ++P LMSSL
Sbjct: 246 SSSRSADPSRGITAQLISSPYLSSGTPNDTACATPGAPSSTASTSIGEIFSPPRLMSSLI 67
Query: 1478 RSTMKISSPSSTYPMSPVCSHP 1413
R T + SST PMSPV +HP
Sbjct: 66 RPTKRTYPSSSTTPMSPVWNHP 1
>gb|CW176273.1|CW176273 104_589_11158401_116_36586_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11158401, DNA
sequence
Length = 497
Score = 82.2 bits (173), Expect(2) = 6e-019
Identities = 41/76 (53%), Positives = 47/76 (61%)
Frame = +1 / -2
Query: 340 RLSRRVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAK 519
RL R AA LGV G VM+LL NSVEF L FL S LGA T ANP TP EI K
Sbjct: 469 RLLCRKAAASLHGLGVGHGDRVMILLQNSVEFVLTFLGASFLGAVTTAANPFCTPLEIHK 290
Query: 520 QAAASGATVVITEPAF 567
Q ASGA +++T+ A+
Sbjct: 289 QFRASGAKLIVTQSAY 242
Score = 64.3 bits (134), Expect(3) = 2e-015
Identities = 33/72 (45%), Positives = 38/72 (52%)
Frame = -2 / +3
Query: 554 VMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPRQ 375
V ++APEA CL IS GV +GLA V APR + R S NSTEF +T P TP
Sbjct: 255 VTMSLAPEALNCLWISSGVQNGLAAVVTAPRNDAPRKVSTNSTEFWSRIMTRSPWPTPSP 434
Query: 374 ARIPAATRRDRR 339
AA R R
Sbjct: 435 CSDAAALRHRSR 470
Score = 37.7 bits (76), Expect(2) = 6e-019
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +1 / -2
Query: 730 LPYSSGTTGLPKGVMLS 780
LP+SSGTTGLPKGV+L+
Sbjct: 52 LPFSSGTTGLPKGVVLT 2
Score = 33.1 bits (66), Expect(3) = 2e-015
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2 / +3
Query: 776 SITPLGSPVVPDEYG 732
S TPLGSPVVPDE G
Sbjct: 6 STTPLGSPVVPDENG 50
Score = 24.4 bits (47), Expect(3) = 2e-015
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1 / +2
Query: 669 IVGGGSEVGERDAALCAVARGDDGDAGE 586
+VGG ++ E AA V DG+ GE
Sbjct: 98 VVGGRDQLPEGQAAFRGVGHVVDGEDGE 181
>gb|BE365886.1|BE365886 PI1_2_B05.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 475
Score = 77.1 bits (162), Expect(2) = 9e-019
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = +1 / +2
Query: 166 PTEPQAETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRL 345
P + VFRS LPDI I + L Y +++E DRACLIDG TG + T+ +V+ L
Sbjct: 173 PEAEEKAAVVFRSKLPDIEINNSQSLQTYCFGKMSEVADRACLIDGQTGASYTYAEVESL 352
Query: 346 SRRVAAGMRA 375
SRR A+G+RA
Sbjct: 353 SRRAASGLRA 382
Score = 39.1 bits (79), Expect(2) = 9e-019
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = +1 / +2
Query: 352 RVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGA 471
R AA +GV G VM LL N EFA FL +RLGA
Sbjct: 356 RRAASGLRAMGVGKGDVVMNLLRNCPEFAFTFLGAARLGA 475
>gb|BG739344.1|BG739344 EM1_81_G11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 740
Score = 70.3 bits (147), Expect(3) = 1e-018
Identities = 28/82 (34%), Positives = 47/82 (57%)
Frame = +1 / +1
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GW H+GD+G + + DR+K++I G ++ E+E ++ HP++++A+VV D+
Sbjct: 157 GWYHSGDLGVKHPDGYVEVRDRMKDVIISGGENISSLEVEKVVCTHPAVLEASVVARADE 336
Query: 1594 SCGEIPVAFVVASGGSGITEDE 1659
GE P AFV G+ DE
Sbjct: 337 RWGESPCAFVTLKDGAADGSDE 402
Score = 38.2 bits (77), Expect(3) = 1e-018
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1 / +1
Query: 1330 GEICIRGKQLMKGYLNNPEATAK 1398
GEI +RG +MKGYL NP+A A+
Sbjct: 76 GEIVLRGNAVMKGYLKNPKANAE 144
Score = 24.9 bits (48), Expect(3) = 1e-018
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 1729 IPKAPSGKILRKDLRAK 1779
+PK +GKI + +LRAK
Sbjct: 487 LPKTATGKIKKHELRAK 537
>gb|BF588386.1|BF588386 FM1_36_A10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 667
Score = 70.3 bits (147), Expect(3) = 1e-018
Identities = 28/82 (34%), Positives = 47/82 (57%)
Frame = +1 / +3
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GW H+GD+G + + DR+K++I G ++ E+E ++ HP++++A+VV D+
Sbjct: 99 GWYHSGDLGVKHPDGYVEVRDRMKDVIISGGENISSLEVEKVVCTHPAVLEASVVARADE 278
Query: 1594 SCGEIPVAFVVASGGSGITEDE 1659
GE P AFV G+ DE
Sbjct: 279 RWGESPCAFVTLKDGAADGSDE 344
Score = 38.2 bits (77), Expect(3) = 1e-018
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEATAK 1398
GEI +RG +MKGYL NP+A A+
Sbjct: 18 GEIVLRGNAVMKGYLKNPKANAE 86
Score = 24.9 bits (48), Expect(3) = 1e-018
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / +3
Query: 1729 IPKAPSGKILRKDLRAK 1779
+PK +GKI + +LRAK
Sbjct: 429 LPKTATGKIKKHELRAK 479
>gb|BE593832.1|BE593832 WS1_102_H06.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 660
Score = 70.3 bits (147), Expect(3) = 1e-018
Identities = 28/82 (34%), Positives = 47/82 (57%)
Frame = +1 / +2
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GW H+GD+G + + DR+K++I G ++ E+E ++ HP++++A+VV D+
Sbjct: 95 GWYHSGDLGVKHPDGYVEVRDRMKDVIISGGENISSLEVEKVVCTHPAVLEASVVARADE 274
Query: 1594 SCGEIPVAFVVASGGSGITEDE 1659
GE P AFV G+ DE
Sbjct: 275 RWGESPCAFVTLKDGAADGSDE 340
Score = 38.2 bits (77), Expect(3) = 1e-018
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1 / +2
Query: 1330 GEICIRGKQLMKGYLNNPEATAK 1398
GEI +RG +MKGYL NP+A A+
Sbjct: 14 GEIVLRGNAVMKGYLKNPKANAE 82
Score = 24.9 bits (48), Expect(3) = 1e-018
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 1729 IPKAPSGKILRKDLRAK 1779
+PK +GKI + +LRAK
Sbjct: 425 LPKTATGKIKKHELRAK 475
>gb|CD208904.1|CD208904 HS1_45_C10.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_45_C10_A012 3', mRNA sequence
Length = 661
Score = 70.3 bits (147), Expect(3) = 1e-018
Identities = 28/82 (34%), Positives = 47/82 (57%)
Frame = +1 / +3
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GW H+GD+G + + DR+K++I G ++ E+E ++ HP++++A+VV D+
Sbjct: 84 GWYHSGDLGVKHPDGYVEVRDRMKDVIISGGENISSLEVEKVVCTHPAVLEASVVARADE 263
Query: 1594 SCGEIPVAFVVASGGSGITEDE 1659
GE P AFV G+ DE
Sbjct: 264 RWGESPCAFVTLKDGAADGSDE 329
Score = 38.2 bits (77), Expect(3) = 1e-018
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEATAK 1398
GEI +RG +MKGYL NP+A A+
Sbjct: 3 GEIVLRGNAVMKGYLKNPKANAE 71
Score = 24.9 bits (48), Expect(3) = 1e-018
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / +3
Query: 1729 IPKAPSGKILRKDLRAK 1779
+PK +GKI + +LRAK
Sbjct: 414 LPKTATGKIKKHELRAK 464
>gb|BE355204.1|BE355204 DG1_10_H02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 621
Score = 70.3 bits (147), Expect(3) = 1e-018
Identities = 28/82 (34%), Positives = 47/82 (57%)
Frame = +1 / +2
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GW H+GD+G + + DR+K++I G ++ E+E ++ HP++++A+VV D+
Sbjct: 122 GWYHSGDLGVKHPDGYVEVRDRMKDVIISGGENISSLEVEKVVCTHPAVLEASVVARADE 301
Query: 1594 SCGEIPVAFVVASGGSGITEDE 1659
GE P AFV G+ DE
Sbjct: 302 RWGESPCAFVTLKDGAADGSDE 367
Score = 38.2 bits (77), Expect(3) = 1e-018
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1 / +2
Query: 1330 GEICIRGKQLMKGYLNNPEATAK 1398
GEI +RG +MKGYL NP+A A+
Sbjct: 41 GEIVLRGNAVMKGYLKNPKANAE 109
Score = 24.9 bits (48), Expect(3) = 1e-018
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 1729 IPKAPSGKILRKDLRAK 1779
+PK +GKI + +LRAK
Sbjct: 451 LPKTATGKIKKHELRAK 501
>gb|CW090129.1|CW090129 104_435_10949104_116_32613_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10949104, DNA
sequence
Length = 730
Score = 96.4 bits (204), Expect = 1e-018
Identities = 42/98 (42%), Positives = 61/98 (62%)
Frame = +1 / +1
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGF 1509
GEI +RG +M GYLN+ EAT I +GW +TGD+G + + I DR K++I G
Sbjct: 430 GEIVVRGGCVMLGYLNDDEATKAAIREDGWFYTGDVGVMHPDGYLEIRDRSKDVIINAGE 609
Query: 1510 QVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFV 1623
++ E+E++L HP++ +AAVV D+ GE P AFV
Sbjct: 610 NISSVEVESVLYDHPAVNEAAVVARPDELRGETPCAFV 723
Score = 59.3 bits (123), Expect(2) = 2e-007
Identities = 35/98 (35%), Positives = 46/98 (46%)
Frame = -2 / -3
Query: 1622 TNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSST 1443
TNA G+SP+ SS TTAAS G ++P +++SL RS +
Sbjct: 722 TNAHGVSPRNSSGRATTAASFTAG*S*STDSTSTLLMFSPALMITSLERSRISR*PSGCI 543
Query: 1442 YPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
P SPV +HPS + VAS R P + P ISP
Sbjct: 542 TPTSPV*NHPSSRIAALVASSSFR*PSMTQPPRTTISP 429
Score = 22.1 bits (42), Expect(2) = 2e-007
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2 / -3
Query: 1124 CSSLPMGAAPEMTMRTDERSWRSMAS 1047
CS+ G AP + MRT S R S
Sbjct: 206 CSTAAGGGAPAVRMRTFPGSGRRTPS 129
>gb|CW255633.1|CW255633 104_720_11226343_148_35134_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11226343, DNA
sequence
Length = 627
Score = 50.1 bits (103), Expect(3) = 4e-018
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +1 / -3
Query: 1246 GACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKG 1368
G G + N E KI+DPETG +L N+ GE+ IRG +MKG
Sbjct: 325 GTAGLLSPNTEAKIVDPETGEALPVNRTGELWIRGPYVMKG 203
Score = 46.0 bits (94), Expect(3) = 4e-018
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +1 / -3
Query: 1069 LSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEA 1188
L ++R V+SG AP+ KEL + + K P+ + QGYG+TE+
Sbjct: 493 LGNLRKVLSGGAPLSKELIEGFKEKYPQVEILQGYGLTES 374
Score = 35.4 bits (71), Expect(3) = 4e-006
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -1 / +2
Query: 1365 FHQLLAPDANLPGLVAVEGQPGLRVDDL*LGI 1270
FH + PD L G V + GLRVDDL LG+
Sbjct: 206 FHDVWPPDPELAGAVHRQCLAGLRVDDLSLGV 301
Score = 35.4 bits (71), Expect(3) = 4e-018
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1 / -3
Query: 931 AALVIMKRFDTLRMFELVKRHGITIVPLVLPIAVEMV 1041
A +V++ +++ M + +G+T +PLV PI V M+
Sbjct: 625 ATIVVLSKYELPEMLRSINEYGVTYLPLVPPILVAML 515
Score = 32.2 bits (64), Expect(3) = 4e-006
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -2 / +3
Query: 1184 SVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMR 1080
SV P PC + G + + S SSL GA PE T+R
Sbjct: 378 SVSPYPCRISTCGYFSLNPSMSSLLSGAPPESTLR 482
Score = 22.1 bits (42), Expect(3) = 4e-006
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1 / +2
Query: 1038 HLHRDGQHERHDRDAVPLHQLEH 970
H DG+HER D V + +H
Sbjct: 518 HGDEDGRHEREVGDPVFIDGAQH 586
>gb|CW077546.1|CW077546 104_382_10892899_148_31762_115 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10892899, DNA
sequence
Length = 731
Score = 91.8 bits (194), Expect(2) = 4e-018
Identities = 41/98 (41%), Positives = 59/98 (60%)
Frame = +1 / -2
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGF 1509
GEI +RG +M GYLN+ AT I GW +TGD+G + + I DR K++I G
Sbjct: 448 GEIVLRGGCVMLGYLNDDTATRAAIRDNGWFYTGDVGVMHPDGYMEIRDRSKDVIISGGE 269
Query: 1510 QVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFV 1623
++ E+E++L HP++ +AAVV D+ GE P AFV
Sbjct: 268 NISSVEVESVLYNHPAVNEAAVVARPDEFWGETPCAFV 155
Score = 65.7 bits (137), Expect = 2e-009
Identities = 36/98 (36%), Positives = 47/98 (47%)
Frame = -2 / +3
Query: 1622 TNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSST 1443
TNA G+SPQ SS TTAAS GW ++P +++SL RS + +
Sbjct: 156 TNAHGVSPQNSSGRATTAASFTAGWL*STDSTSTLLMFSPPLMITSLDRSRISMYPSGCI 335
Query: 1442 YPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
P SPV +HP + VA LR P + P ISP
Sbjct: 336 TPTSPV*NHPLSRIAALVAVSSLR*PSMTHPPRSTISP 449
Score = 22.1 bits (42), Expect(2) = 4e-018
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / -2
Query: 1273 AELKIIDPETGLSLHRN 1323
AE+ I+D ETG S+ R+
Sbjct: 511 AEVDIVDGETGHSVPRD 461
>gb|CW090128.1|CW090128 104_435_10949104_114_32612_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10949104, DNA
sequence
Length = 734
Score = 94.1 bits (199), Expect = 7e-018
Identities = 42/98 (42%), Positives = 60/98 (61%)
Frame = +1 / -1
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGF 1509
GEI RG +M GYLN+ EAT I +GW +TGD+G + + I DR K++I G
Sbjct: 707 GEIVSRGGCVMLGYLNDDEATKAAIREDGWFYTGDVGVMHPDGYLEIRDRSKDVIINAGE 528
Query: 1510 QVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFV 1623
++ E+E++L HP++ +AAVV D+ GE P AFV
Sbjct: 527 NISSVEVESVLYDHPAVNEAAVVARPDELRGETPCAFV 414
Score = 58.3 bits (121), Expect = 4e-007
Identities = 35/98 (35%), Positives = 46/98 (46%)
Frame = -2 / +1
Query: 1622 TNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSST 1443
TNA G+SP+ SS TTAAS G ++P +++SL RS +
Sbjct: 415 TNAHGVSPRNSSGRATTAASFTAG*S*STDSTSTLLMFSPALMITSLERSRISR*PSGCI 594
Query: 1442 YPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
P SPV +HPS + VAS R P + P ISP
Sbjct: 595 TPTSPV*NHPSSRIAALVASSSFR*PSMTQPPRDTISP 708
>gb|CF758077.1|CF758077 DSAF1_27_A03.g1_A011 Drought-stressed after flowering Sorghum bicolor
cDNA clone DSAF1_27_A03_A011 3', mRNA sequence
Length = 532
Score = 91.8 bits (194), Expect = 3e-017
Identities = 34/71 (47%), Positives = 54/71 (76%)
Frame = +1 / +3
Query: 1558 IVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPK 1737
I+DAAV+ D+ G++P+AF+V GS +T+ ++ +VAKQV YK++ ++ FV AIPK
Sbjct: 3 IMDAAVIPYPDEDVGQLPMAFIVRKPGSNLTKQQVMDFVAKQVAPYKKVRRVAFVSAIPK 182
Query: 1738 APSGKILRKDL 1770
+P+GKILR++L
Sbjct: 183 SPAGKILRREL 215
Score = 46.0 bits (94), Expect = 0.002
Identities = 29/75 (38%), Positives = 34/75 (45%)
Frame = -2 / -1
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATG 1608
D + + S KI P G LG+A TK + L TC AT + V EP T A G
Sbjct: 232 DTACSTSSRRKIFPAGDLGIAETKATRRTFLYGATCLATKSMTCCLVRFEPGFLTIKAIG 53
Query: 1607 ISPQESSFIWTTAAS 1563
P SS TAAS
Sbjct: 52 SCPTSSSGYGITAAS 8
>gb|CW499007.1|CW499007 fsbb001f293i23f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f293i23, DNA
sequence
Length = 715
Score = 83.1 bits (175), Expect(2) = 4e-017
Identities = 38/102 (37%), Positives = 55/102 (53%)
Frame = +1 / +2
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GWL TGD+G I I DR K++I G ++ E+E++L HP+++DAAVV DD
Sbjct: 131 GWLRTGDLGVRHRDGYIQIKDRSKDIIISGGENISSIEVESVLFGHPAVLDAAVVARPDD 310
Query: 1594 SCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFF 1719
GE P AFV G+ T D+I + ++ Y + F
Sbjct: 311 HWGETPCAFVTLKNGATATADDIIGFCRARLPHYMAPRTVVF 436
Score = 59.3 bits (123), Expect = 2e-007
Identities = 34/96 (35%), Positives = 48/96 (50%)
Frame = -2 / -2
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
++SS+V P + TNA G+SPQ SS + TTAAS+ G ++P +M S
Sbjct: 381 MMSSAVAVAPFLSVTNAHGVSPQWSSGLATTAASSTAGCPNSTDSTSMELMFSPPEMMMS 202
Query: 1484 LSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGL 1377
L RS + + P SPV SHP + A+ L
Sbjct: 201 LDRSLIWMYPSRWRTPRSPVRSHPPRTASSVAAASL 94
Score = 27.6 bits (54), Expect(2) = 4e-017
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1 / +2
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GE+ +RG +M GY + AT + +
Sbjct: 50 GEVMLRGNTVMSGYYKDAAATEEAV 124
>gb|CW220527.1|CW220527 104_655_11197397_116_37153_027 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197397, DNA
sequence
Length = 664
Score = 51.9 bits (107), Expect(3) = 4e-017
Identities = 19/36 (52%), Positives = 30/36 (83%)
Frame = +1 / +2
Query: 1681 QVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLAS 1788
QV +YK+L ++ FV+++PK+ SGKILR++L AK+ S
Sbjct: 473 QVAYYKKLRRVTFVDSVPKSASGKILRRELIAKVRS 580
Score = 41.4 bits (84), Expect(3) = 4e-017
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +1 / +3
Query: 1507 FQVAPAELEAMLIAHPSIVDAAVV 1578
+Q+APAELE +L++HP I+DA V+
Sbjct: 18 WQIAPAELEGLLLSHPEILDAVVI 89
Score = 40.5 bits (82), Expect(3) = 4e-017
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +1 / +2
Query: 1588 DDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRL 1704
D GE+P+A+VV S S +TE ++++++ KQV + L
Sbjct: 206 DAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVSLCRNL 322
Score = 35.4 bits (71), Expect = 3.0
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -2 / -2
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTC 1680
D + A+ S LKI P+ G STK L + L* TC
Sbjct: 579 DLTLAISSLLKIFPEADFGTLSTKVTLLNFL*YATC 472
>gb|CW311232.1|CW311232 104_800_11470125_148_35757_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470125, DNA
sequence
Length = 682
Score = 51.9 bits (107), Expect(3) = 5e-017
Identities = 19/36 (52%), Positives = 30/36 (83%)
Frame = +1 / +3
Query: 1681 QVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLAS 1788
QV +YK+L ++ FV+++PK+ SGKILR++L AK+ S
Sbjct: 489 QVAYYKKLRRVTFVDSVPKSASGKILRRELIAKVRS 596
Score = 41.4 bits (84), Expect(3) = 5e-017
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +1 / +1
Query: 1507 FQVAPAELEAMLIAHPSIVDAAVV 1578
+Q+APAELE +L++HP I+DA V+
Sbjct: 34 WQIAPAELEGLLLSHPEILDAVVI 105
Score = 40.5 bits (82), Expect(3) = 5e-017
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +1 / +3
Query: 1588 DDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRL 1704
D GE+P+A+VV S S +TE ++++++ KQV + L
Sbjct: 222 DAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVSLCRNL 338
Score = 35.4 bits (71), Expect = 3.0
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -2 / -1
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTC 1680
D + A+ S LKI P+ G STK L + L* TC
Sbjct: 595 DLTLAISSLLKIFPEADFGTLSTKVTLLNFL*YATC 488
>gb|CW194265.1|CW194265 104_617_11180005_148_36791_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180005, DNA
sequence
Length = 706
Score = 51.9 bits (107), Expect(3) = 5e-017
Identities = 19/36 (52%), Positives = 30/36 (83%)
Frame = +1 / -1
Query: 1681 QVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLAS 1788
QV +YK+L ++ FV+++PK+ SGKILR++L AK+ S
Sbjct: 220 QVAYYKKLRRVTFVDSVPKSASGKILRRELIAKVRS 113
Score = 41.4 bits (84), Expect(3) = 5e-017
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +1 / -2
Query: 1507 FQVAPAELEAMLIAHPSIVDAAVV 1578
+Q+APAELE +L++HP I+DA V+
Sbjct: 675 WQIAPAELEGLLLSHPEILDAVVI 604
Score = 40.5 bits (82), Expect(3) = 5e-017
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +1 / -1
Query: 1588 DDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRL 1704
D GE+P+A+VV S S +TE ++++++ KQV + L
Sbjct: 487 DAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVSLCRNL 371
Score = 35.4 bits (71), Expect = 3.0
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -2 / +3
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTC 1680
D + A+ S LKI P+ G STK L + L* TC
Sbjct: 114 DLTLAISSLLKIFPEADFGTLSTKVTLLNFL*YATC 221
>gb|CW251944.1|CW251944 104_714_11224217_116_35068_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11224217, DNA
sequence
Length = 602
Score = 83.5 bits (176), Expect(2) = 5e-017
Identities = 38/102 (37%), Positives = 56/102 (54%)
Frame = +1 / -2
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GWLHTGD+ I + DR K++I G V+ E+E +L +HP++++AAVV DD
Sbjct: 343 GWLHTGDLAVRHPDGSIQVKDRAKDIIISGGENVSSIEVETLLSSHPAVLEAAVVARPDD 164
Query: 1594 SCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFF 1719
GE P AFV G+ TE EI + +++ Y + F
Sbjct: 163 HWGETPCAFVKLKDGASATEAEIIGFCRERLPRYMAPRTVVF 38
Score = 49.6 bits (102), Expect(2) = 8e-006
Identities = 27/64 (42%), Positives = 36/64 (56%)
Frame = -2 / +3
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+IS+SV P + TNA G+SPQ SS + TTAAS G T++P +M S
Sbjct: 93 MISASVALAPSLSFTNAHGVSPQWSSGLATTAASRTAG*LDSSVSTSIELTFSPPEMMMS 272
Query: 1484 LSRS 1473
L+RS
Sbjct: 273 LARS 284
Score = 26.7 bits (52), Expect(2) = 5e-017
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1 / -2
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GE+ RG +M GY + +AT + +
Sbjct: 424 GEVMFRGNTMMSGYYRDLDATKEAM 350
Score = 22.6 bits (43), Expect(2) = 8e-006
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / +3
Query: 1433 SPVCSHP 1413
SPVCSHP
Sbjct: 324 SPVCSHP 344
>gb|CN131390.1|CN131390 RHOH1_47_E11.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_47_E11_A002 5', mRNA sequence
Length = 599
Score = 83.5 bits (176), Expect(2) = 5e-017
Identities = 38/102 (37%), Positives = 56/102 (54%)
Frame = +1 / -3
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GWLHTGD+ I + DR K++I G V+ E+E +L +HP++++AAVV DD
Sbjct: 333 GWLHTGDLAVRHPDGSIQVKDRAKDIIISGGENVSSIEVETLLSSHPAVLEAAVVARPDD 154
Query: 1594 SCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFF 1719
GE P AFV G+ TE EI + +++ Y + F
Sbjct: 153 HWGETPCAFVKLKDGASATEAEIIGFCRERLPRYMAPRTVVF 28
Score = 49.6 bits (102), Expect(2) = 8e-006
Identities = 27/64 (42%), Positives = 36/64 (56%)
Frame = -2 / +2
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+IS+SV P + TNA G+SPQ SS + TTAAS G T++P +M S
Sbjct: 83 MISASVALAPSLSFTNAHGVSPQWSSGLATTAASRTAG*LDSSVSTSIELTFSPPEMMMS 262
Query: 1484 LSRS 1473
L+RS
Sbjct: 263 LARS 274
Score = 26.7 bits (52), Expect(2) = 5e-017
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1 / -3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GE+ RG +M GY + +AT + +
Sbjct: 414 GEVMFRGNTMMSGYYRDLDATKEAM 340
Score = 22.6 bits (43), Expect(2) = 8e-006
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / +2
Query: 1433 SPVCSHP 1413
SPVCSHP
Sbjct: 314 SPVCSHP 334
>gb|CW461851.1|CW461851 fsbb001f209l10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f209l10, DNA
sequence
Length = 603
Score = 50.1 bits (103), Expect(4) = 8e-017
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +1 / -3
Query: 1246 GACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKG 1368
G G + N E KI+DPETG +L N+ GE+ IRG +MKG
Sbjct: 265 GTAGLLSPNTEAKIVDPETGEALPVNRTGELWIRGPYVMKG 143
Score = 38.2 bits (77), Expect(4) = 8e-017
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1 / -2
Query: 928 GAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAVEMV 1041
GA +V++ +++ M + +G+T +PLV PI V M+
Sbjct: 569 GATIVVLSKYELPEMLRSINEYGVTYLPLVPPILVAML 456
Score = 35.4 bits (71), Expect(2) = 1.2
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -1 / +2
Query: 1365 FHQLLAPDANLPGLVAVEGQPGLRVDDL*LGI 1270
FH + PD L G V + GLRVDDL LG+
Sbjct: 146 FHDVWPPDPELAGAVHRQCLAGLRVDDLSLGV 241
Score = 31.3 bits (62), Expect(4) = 8e-017
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +1 / -2
Query: 1069 LSSVRMVISGAAPMGKELQDLLRAKLP 1149
L ++R V+SG AP+ KEL + ++ ++P
Sbjct: 434 LGNLRKVLSGGAPLSKELIEAVQGEVP 354
Score = 24.0 bits (46), Expect(4) = 8e-017
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1 / -3
Query: 1135 RAKLPRAVLGQGYGMTEA 1188
+ K P+ + QGYG+TE+
Sbjct: 367 KEKYPQVEILQGYGLTES 314
Score = 22.1 bits (42), Expect(2) = 1.2
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1 / +3
Query: 1038 HLHRDGQHERHDRDAVPLHQLEH 970
H DG+HER D V + +H
Sbjct: 459 HGDEDGRHEREVGDPVFIDGAQH 527
>gb|CD229432.1|CD229432 CCC1_15_E01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_15_E01_A007 5', mRNA sequence
Length = 328
Score = 90.4 bits (191), Expect = 8e-017
Identities = 37/61 (60%), Positives = 46/61 (75%)
Frame = +1 / +1
Query: 193 VFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAGMR 372
+FR+ LPDIAI + LPLH Y ERL E DR CLIDGATG T+ +VDRL+RR+AA +R
Sbjct: 121 IFRTKLPDIAITNFLPLHRYCFERLPEVADRPCLIDGATGAVRTYAEVDRLTRRLAAALR 300
Query: 373 A 375
+
Sbjct: 301 S 303
>gb|CN147316.1|CN147316 WOUND1_49_A07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_49_A07_A002 3', mRNA sequence
Length = 752
Score = 83.1 bits (175), Expect(2) = 9e-017
Identities = 36/102 (35%), Positives = 57/102 (55%)
Frame = +1 / +2
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GWLHTGD+ I + DR K++I G ++ E+E+++ +HP++++AAVV DD
Sbjct: 203 GWLHTGDLAVRHPDGYIELKDRAKDIIISGGENISSIEVESVIFSHPAVLEAAVVARPDD 382
Query: 1594 SCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFF 1719
GE P AFV G+ TE EI + +++ Y + F
Sbjct: 383 HWGETPCAFVKLKDGASATEAEIISFCRERLPHYMAPKTVVF 508
Score = 66.1 bits (138), Expect = 2e-009
Identities = 34/84 (40%), Positives = 43/84 (51%)
Frame = -2 / -3
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+IS+SV P + TNA G+SPQ SS TTAAS GW ++P +M S
Sbjct: 453 MISASVALAPSLSLTNAHGVSPQWSSGRATTAASRTAGWLKITDSTSMELMFSPPEMMMS 274
Query: 1484 LSRSTMKISSPSSTYPMSPVCSHP 1413
L+RS + SPVCSHP
Sbjct: 273 LARSLSSMYPSGCRTARSPVCSHP 202
Score = 26.3 bits (51), Expect(2) = 9e-017
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1 / +2
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GE+ RG +M GY + +AT +++
Sbjct: 122 GEVMFRGNTVMSGYYKDLKATKESM 196
>gb|CW073815.1|CW073815 104_340_10781690_116_31470_170 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10781690, DNA
sequence
Length = 621
Score = 83.1 bits (175), Expect(2) = 9e-017
Identities = 36/102 (35%), Positives = 57/102 (55%)
Frame = +1 / -3
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GWLHTGD+ I + DR K++I G ++ E+E+++ +HP++++AAVV DD
Sbjct: 340 GWLHTGDLAVRHPDGYIELKDRAKDIIISGGENISSIEVESVIFSHPAVLEAAVVARPDD 161
Query: 1594 SCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFF 1719
GE P AFV G+ TE EI + +++ Y + F
Sbjct: 160 HWGETPCAFVKLKDGASATEAEIISFCRERLPHYMAPKTVVF 35
Score = 66.1 bits (138), Expect = 2e-009
Identities = 34/84 (40%), Positives = 43/84 (51%)
Frame = -2 / +3
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+IS+SV P + TNA G+SPQ SS TTAAS GW ++P +M S
Sbjct: 90 MISASVALAPSLSLTNAHGVSPQWSSGRATTAASRTAGWLKITDSTSMELMFSPPEMMMS 269
Query: 1484 LSRSTMKISSPSSTYPMSPVCSHP 1413
L+RS + SPVCSHP
Sbjct: 270 LARSLSSMYPSGCRTARSPVCSHP 341
Score = 26.3 bits (51), Expect(2) = 9e-017
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1 / -3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GE+ RG +M GY + +AT +++
Sbjct: 421 GEVMFRGNTVMSGYYKDLKATKESM 347
>gb|CW271688.1|CW271688 104_744_11403133_116_36221_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403133, DNA
sequence
Length = 655
Score = 49.2 bits (101), Expect(3) = 1e-016
Identities = 19/36 (52%), Positives = 29/36 (80%)
Frame = +1 / -1
Query: 1681 QVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLAS 1788
QV YKRL K+ FV+++PK+ +GKILR++L A++ S
Sbjct: 175 QVAHYKRLRKVKFVDSVPKSAAGKILRRELIAQVRS 68
Score = 43.2 bits (88), Expect(3) = 1e-016
Identities = 15/24 (62%), Positives = 22/24 (91%)
Frame = +1 / -2
Query: 1507 FQVAPAELEAMLIAHPSIVDAAVV 1578
+Q+APAELE +L++HP I+DAAV+
Sbjct: 621 WQIAPAELEGLLLSHPEILDAAVI 550
Score = 40.0 bits (81), Expect(3) = 1e-016
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1 / -3
Query: 1588 DDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKR 1701
D GE+P+A+VV S S + E ++++++ KQV+ R
Sbjct: 461 DPEAGEVPIAYVVRSPKSSLAEVDVQKFIEKQVMLASR 348
>gb|CW464151.1|CW464151 fsbb001f213e01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f213e01, DNA
sequence
Length = 579
Score = 66.6 bits (139), Expect(3) = 1e-016
Identities = 31/66 (46%), Positives = 39/66 (59%)
Frame = +1 / +2
Query: 358 AAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASG 537
A + + GVR G V+ PN + + F A + LGA ATTANPL+TP E AKQA S
Sbjct: 35 AVALSSRAGVRRGDVVLFFAPNCFLYPVCFFAVTALGAVATTANPLYTPREGAKQATDSR 214
Query: 538 ATVVIT 555
A + IT
Sbjct: 215 AKLAIT 232
Score = 53.3 bits (110), Expect(3) = 2e-010
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = -2 / -1
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPR 378
+V+ ++A E+ ACLA S GV GLAVVA APR A+ + + G T P RTP
Sbjct: 234 TVIASLARESVACLAPSRGV*RGLAVVATAPRAVTAKKQTG*RKQLGAKKRTTSPRRTPA 55
Query: 377 QARIPAATRR 348
+ A R
Sbjct: 54 REESATAVVR 25
Score = 40.0 bits (81), Expect(3) = 1e-016
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1 / +2
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQL 813
L YSSGTTG KGV+L+HR +++ A +
Sbjct: 425 LLYSSGTTGASKGVILTHRNFISAAAMM 508
Score = 33.6 bits (67), Expect(3) = 2e-010
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2 / -1
Query: 785 RCDSITPLGSPVVPDEY 735
RC ITPL +PVVPDEY
Sbjct: 480 RCVRITPLLAPVVPDEY 430
Score = 25.4 bits (49), Expect(3) = 1e-016
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1 / +2
Query: 853 DVVLCVLPMFHV 888
+V LC LPMFH+
Sbjct: 542 NVFLCFLPMFHI 577
Score = 23.5 bits (45), Expect(3) = 2e-010
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3 / -2
Query: 1729 WPPRRRSCAAS 1697
WPP R SC AS
Sbjct: 503 WPPPR*SCGAS 471
>gb|BZ694054.1|BZ694054 SP__Ba0042B06.r SP__Ba Sorghum propinquum genomic clone SP__Ba0042B06
3', DNA sequence
Length = 942
Score = 78.5 bits (165), Expect(2) = 2e-016
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = +1 / +3
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQV 1515
+GWLHTGDIGY D+G ++F+VDRLKELIKYKGFQV
Sbjct: 288 QGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQV 392
Score = 54.7 bits (113), Expect = 5e-006
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = -2 / -3
Query: 1514 TWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHP 1413
T PLYL+SSLS ST K PSS YP+SPVC+HP
Sbjct: 391 T*KPLYLISSLSLSTTKS*PPSSKYPISPVCNHP 290
Score = 34.1 bits (68), Expect(2) = 2e-016
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1 / +3
Query: 1498 YKGFQVAPAELEAMLIAHPSIVDA 1569
Y +Q+APAEL +L++HP I+DA
Sbjct: 834 YFFWQIAPAEL*RLLLSHPEILDA 905
>gb|CW235334.1|CW235334 104_690_11214926_116_37408_053 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214926, DNA
sequence
Length = 594
Score = 89.0 bits (188), Expect = 2e-016
Identities = 43/107 (40%), Positives = 57/107 (53%)
Frame = +1 / -3
Query: 235 LPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAGMRACLGVRSGGTVMLL 414
L L+D + R L+D ATG++LTF A + + GVR G V+
Sbjct: 538 LSLNDLLFRRADACPSALALVDSATGQSLTFAAFRSAVLTTAVALSSRAGVRRGDVVLFF 359
Query: 415 LPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
PN + + F A + LGA ATTANPL+TP E+AKQA S A + IT
Sbjct: 358 APNCFLYPVCFFAVTALGAVATTANPLYTPREVAKQATDSRAKLAIT 218
Score = 54.2 bits (112), Expect(2) = 8e-007
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = -2 / +3
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPR 378
+V+ ++A E+ ACLA S GV GLAVVA APR A+ + + G T P RTP
Sbjct: 216 TVIASLARESVACLATSRGV*RGLAVVATAPRAVTAKKQTG*RKQLGAKKRTTSPRRTPA 395
Query: 377 QARIPAATRR 348
+ A R
Sbjct: 396 REESATAVVR 425
Score = 24.9 bits (48), Expect(2) = 8e-007
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3 / +1
Query: 106 RAGDKRLAASGRVGGAGPGSELCAR 32
R G +R G G GPG CAR
Sbjct: 490 RRGTRRRGGRGGR*GRGPGRTRCAR 564
>gb|CW235335.1|CW235335 104_690_11214926_148_37412_053 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214926, DNA
sequence
Length = 653
Score = 89.0 bits (188), Expect = 2e-016
Identities = 43/107 (40%), Positives = 57/107 (53%)
Frame = +1 / +1
Query: 235 LPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAGMRACLGVRSGGTVMLL 414
L L+D + R L+D ATG++LTF A + + GVR G V+
Sbjct: 166 LSLNDLLFRRADACPSALALVDSATGQSLTFAAFRSAVLTTAVALSSRAGVRRGDVVLFF 345
Query: 415 LPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
PN + + F A + LGA ATTANPL+TP E+AKQA S A + IT
Sbjct: 346 APNCFLYPVCFFAVTALGAVATTANPLYTPREVAKQATDSRAKLAIT 486
Score = 54.2 bits (112), Expect(2) = 8e-007
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = -2 / -1
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPR 378
+V+ ++A E+ ACLA S GV GLAVVA APR A+ + + G T P RTP
Sbjct: 488 TVIASLARESVACLATSRGV*RGLAVVATAPRAVTAKKQTG*RKQLGAKKRTTSPRRTPA 309
Query: 377 QARIPAATRR 348
+ A R
Sbjct: 308 REESATAVVR 279
Score = 24.9 bits (48), Expect(2) = 8e-007
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3 / -2
Query: 106 RAGDKRLAASGRVGGAGPGSELCAR 32
R G +R G G GPG CAR
Sbjct: 214 RRGTRRRGGRGGR*GRGPGRTRCAR 140
>gb|CD423222.1|CD423222 SA1_27_B10.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_27_B10_A002 5', mRNA sequence
Length = 590
Score = 89.0 bits (188), Expect = 2e-016
Identities = 43/107 (40%), Positives = 57/107 (53%)
Frame = +1 / +3
Query: 235 LPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAGMRACLGVRSGGTVMLL 414
L L+D + R L+D ATG++LTF A + + GVR G V+
Sbjct: 210 LSLNDLLFRRADACPSALALVDSATGQSLTFAAFRSAVLTTAVALSSRAGVRRGDVVLFF 389
Query: 415 LPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
PN + + F A + LGA ATTANPL+TP E+AKQA S A + IT
Sbjct: 390 APNCFLYPVCFFAVTALGAVATTANPLYTPREVAKQATDSRAKLAIT 530
Score = 54.2 bits (112), Expect(2) = 7e-007
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = -2 / -2
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPR 378
+V+ ++A E+ ACLA S GV GLAVVA APR A+ + + G T P RTP
Sbjct: 532 TVIASLARESVACLATSRGV*RGLAVVATAPRAVTAKKQTG*RKQLGAKKRTTSPRRTPA 353
Query: 377 QARIPAATRR 348
+ A R
Sbjct: 352 REESATAVVR 323
Score = 24.9 bits (48), Expect(2) = 7e-007
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3 / -3
Query: 106 RAGDKRLAASGRVGGAGPGSELCAR 32
R G +R G G GPG CAR
Sbjct: 258 RRGTRRRGGRGGR*GRGPGRTRCAR 184
>gb|CD424325.1|CD424325 SA1_4_H11.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_4_H11_A002 5', mRNA sequence
Length = 744
Score = 89.0 bits (188), Expect = 2e-016
Identities = 43/107 (40%), Positives = 57/107 (53%)
Frame = +1 / +2
Query: 235 LPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAGMRACLGVRSGGTVMLL 414
L L+D + R L+D ATG++LTF A + + GVR G V+
Sbjct: 212 LSLNDLLFRRADACPSALALVDSATGQSLTFAAFRSAVLTTAVALSSRAGVRRGDVVLFF 391
Query: 415 LPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
PN + + F A + LGA ATTANPL+TP E+AKQA S A + IT
Sbjct: 392 APNCFLYPVCFFAVTALGAVATTANPLYTPREVAKQATDSRAKLAIT 532
Score = 54.2 bits (112), Expect(2) = 9e-007
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = -2 / -1
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPR 378
+V+ ++A E+ ACLA S GV GLAVVA APR A+ + + G T P RTP
Sbjct: 534 TVIASLARESVACLATSRGV*RGLAVVATAPRAVTAKKQTG*RKQLGAKKRTTSPRRTPA 355
Query: 377 QARIPAATRR 348
+ A R
Sbjct: 354 REESATAVVR 325
Score = 24.9 bits (48), Expect(2) = 9e-007
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3 / -2
Query: 106 RAGDKRLAASGRVGGAGPGSELCAR 32
R G +R G G GPG CAR
Sbjct: 260 RRGTRRRGGRGGR*GRGPGRTRCAR 186
>gb|CW200592.1|CW200592 104_626_11184133_148_36870_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11184133, DNA
sequence
Length = 441
Score = 82.6 bits (174), Expect(2) = 3e-016
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +1 / -1
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GWL TGD+G I I DR K++I G ++ E+E++L+ HP+++DAAVV DD
Sbjct: 363 GWLRTGDLGVRHRDGYIQIKDRSKDIIISGGENISSIEVESVLLGHPAVLDAAVVARPDD 184
Query: 1594 SCGEIPVAFVVASGGSGITEDEI 1662
GE P AFV G+ T D+I
Sbjct: 183 HWGETPCAFVTLKNGATATADDI 115
Score = 59.3 bits (123), Expect = 2e-007
Identities = 34/96 (35%), Positives = 48/96 (50%)
Frame = -2 / +2
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
++SS+V P + TNA G+SPQ SS + TTAAS+ G ++P +M S
Sbjct: 113 MMSSAVAVAPFLSVTNAHGVSPQWSSGLATTAASSTAGCPNSTDSTSMELMFSPPEMMMS 292
Query: 1484 LSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGL 1377
L RS + + P SPV SHP + A+ L
Sbjct: 293 LDRSLIWMYPSRWRTPRSPVRSHPPRTASSVAAASL 400
Score = 24.9 bits (48), Expect(2) = 3e-016
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1 / -1
Query: 1333 EICIRGKQLMKGYLNNPEATAKTI 1404
E+ +RG +M GY + AT + +
Sbjct: 441 EVMLRGNTVMSGYYKDAAATEEAV 370
>gb|CW359305.1|CW359305 fsbb001f026n23k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f026n23, DNA
sequence
Length = 184
Score = 87.2 bits (184), Expect = 8e-016
Identities = 34/42 (80%), Positives = 39/42 (92%)
Frame = +1 / -2
Query: 1243 SGACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKG 1368
SG+CGTVVRNAELKI+DP+T SL RNQPGEICIRG+Q+MKG
Sbjct: 183 SGSCGTVVRNAELKIVDPDTSESLGRNQPGEICIRGEQIMKG 58
Score = 70.7 bits (148), Expect = 7e-011
Identities = 30/42 (71%), Positives = 31/42 (73%)
Frame = -2 / +2
Query: 1367 PFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPD 1242
PF+ C P M ISPGW R DS VSGS I SSAFLTTVPQ PD
Sbjct: 59 PFMICSPRMHISPGWFRPSDSLVSGSTILSSAFLTTVPQEPD 184
Score = 41.4 bits (84), Expect = 0.049
Identities = 23/55 (41%), Positives = 30/55 (54%)
Frame = -1 / +1
Query: 1407 VDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHRAAGTG 1243
V G R+ + + FH L A DA L LV+ + G+ VDDL L +P AAG G
Sbjct: 19 VSGKRQESKGLGGTFHDLFAADAYLAWLVSSQRLAGVWVDDLELRVPDDGAAGAG 183
Score = 38.6 bits (78), Expect = 0.33
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +3 / -1
Query: 1242 VRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQGQAVDER 1367
VR LRH +E A+D RP + V +PAR D+H + ER
Sbjct: 184 VRLLRHRRQERGAQDRRPRHQRVAGTKPARRDMHPRRTNHER 59
>gb|CB924558.1|CB924558 ABA1_21_C11.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_21_C11_A012 5', mRNA sequence
Length = 689
Score = 87.2 bits (184), Expect = 8e-016
Identities = 42/107 (39%), Positives = 57/107 (53%)
Frame = +1 / +1
Query: 235 LPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAGMRACLGVRSGGTVMLL 414
L L+D + R L+D ATG++L+F A + + GVR G V+
Sbjct: 202 LSLNDLLFRRADACPSALALVDSATGQSLSFAAFRSAVLTTAVALSSRAGVRRGDVVLFF 381
Query: 415 LPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
PN + + F A + LGA ATTANPL+TP E+AKQA S A + IT
Sbjct: 382 APNCFLYPVCFFAVTALGAVATTANPLYTPREVAKQATDSRAKLAIT 522
Score = 54.7 bits (113), Expect(2) = 6e-007
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = -2 / -1
Query: 566 NAGSVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLR 387
++ +V+ ++A E+ ACLA S GV GLAVVA APR A+ + + G T P R
Sbjct: 533 SSDTVIASLARESVACLATSRGV*RGLAVVATAPRAVTAKKQTG*RKQLGAKKRTTSPRR 354
Query: 386 TPRQARIPAATRR 348
TP + A R
Sbjct: 353 TPAREESATAVVR 315
Score = 24.9 bits (48), Expect(2) = 6e-007
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3 / -2
Query: 106 RAGDKRLAASGRVGGAGPGSELCAR 32
R G +R G G GPG CAR
Sbjct: 250 RRGTRRRGGRGGR*GRGPGRTRCAR 176
>gb|CB927879.1|CB927879 ABA1_34_D08.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_34_D08_A012 5', mRNA sequence
Length = 624
Score = 87.2 bits (184), Expect = 8e-016
Identities = 42/107 (39%), Positives = 57/107 (53%)
Frame = +1 / +3
Query: 235 LPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAGMRACLGVRSGGTVMLL 414
L L+D + R L+D ATG++L+F A + + GVR G V+
Sbjct: 216 LSLNDLLFRRADACPSALALVDSATGQSLSFAAFRSAVLTTAVALSSRAGVRRGDVVLFF 395
Query: 415 LPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
PN + + F A + LGA ATTANPL+TP E+AKQA S A + IT
Sbjct: 396 APNCFLYPVCFFAVTALGAVATTANPLYTPREVAKQATDSRAKLAIT 536
Score = 54.7 bits (113), Expect(2) = 6e-007
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = -2 / -3
Query: 566 NAGSVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLR 387
++ +V+ ++A E+ ACLA S GV GLAVVA APR A+ + + G T P R
Sbjct: 547 SSDTVIASLARESVACLATSRGV*RGLAVVATAPRAVTAKKQTG*RKQLGAKKRTTSPRR 368
Query: 386 TPRQARIPAATRR 348
TP + A R
Sbjct: 367 TPAREESATAVVR 329
Score = 24.9 bits (48), Expect(2) = 6e-007
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3 / -1
Query: 106 RAGDKRLAASGRVGGAGPGSELCAR 32
R G +R G G GPG CAR
Sbjct: 264 RRGTRRRGGRGGR*GRGPGRTRCAR 190
>gb|CD207192.1|CD207192 HS1_27_H05.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_27_H05_A012 5', mRNA sequence
Length = 598
Score = 87.2 bits (184), Expect = 8e-016
Identities = 42/107 (39%), Positives = 57/107 (53%)
Frame = +1 / +1
Query: 235 LPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAGMRACLGVRSGGTVMLL 414
L L+D + R L+D ATG++L+F A + + GVR G V+
Sbjct: 217 LSLNDLLFRRADACPSALALVDSATGQSLSFAAFRSAVLTTAVALSSRAGVRRGDVVLFF 396
Query: 415 LPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
PN + + F A + LGA ATTANPL+TP E+AKQA S A + IT
Sbjct: 397 APNCFLYPVCFFAVTALGAVATTANPLYTPREVAKQATDSRAKLAIT 537
Score = 54.7 bits (113), Expect(2) = 6e-007
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = -2 / -3
Query: 566 NAGSVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLR 387
++ +V+ ++A E+ ACLA S GV GLAVVA APR A+ + + G T P R
Sbjct: 548 SSDTVIASLARESVACLATSRGV*RGLAVVATAPRAVTAKKQTG*RKQLGAKKRTTSPRR 369
Query: 386 TPRQARIPAATRR 348
TP + A R
Sbjct: 368 TPAREESATAVVR 330
Score = 24.9 bits (48), Expect(2) = 6e-007
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3 / -1
Query: 106 RAGDKRLAASGRVGGAGPGSELCAR 32
R G +R G G GPG CAR
Sbjct: 265 RRGTRRRGGRGGR*GRGPGRTRCAR 191
>gb|CD231789.1|CD231789 SS1_23_H09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_23_H09_A012 5', mRNA sequence
Length = 600
Score = 87.2 bits (184), Expect = 8e-016
Identities = 42/107 (39%), Positives = 57/107 (53%)
Frame = +1 / +3
Query: 235 LPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAGMRACLGVRSGGTVMLL 414
L L+D + R L+D ATG++L+F A + + GVR G V+
Sbjct: 219 LSLNDLLFRRADACPSALALVDSATGQSLSFAAFRSAVLTTAVALSSRAGVRRGDVVLFF 398
Query: 415 LPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
PN + + F A + LGA ATTANPL+TP E+AKQA S A + IT
Sbjct: 399 APNCFLYPVCFFAVTALGAVATTANPLYTPREVAKQATDSRAKLAIT 539
Score = 54.7 bits (113), Expect(2) = 6e-007
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = -2 / -3
Query: 566 NAGSVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLR 387
++ +V+ ++A E+ ACLA S GV GLAVVA APR A+ + + G T P R
Sbjct: 550 SSDTVIASLARESVACLATSRGV*RGLAVVATAPRAVTAKKQTG*RKQLGAKKRTTSPRR 371
Query: 386 TPRQARIPAATRR 348
TP + A R
Sbjct: 370 TPAREESATAVVR 332
Score = 24.9 bits (48), Expect(2) = 6e-007
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3 / -1
Query: 106 RAGDKRLAASGRVGGAGPGSELCAR 32
R G +R G G GPG CAR
Sbjct: 267 RRGTRRRGGRGGR*GRGPGRTRCAR 193
>gb|CW030917.1|CW030917 104_259_10500498_116_30398 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500498, DNA
sequence
Length = 876
Score = 78.0 bits (164), Expect(2) = 8e-016
Identities = 35/102 (34%), Positives = 56/102 (54%)
Frame = +1 / -2
Query: 1468 IVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGI 1647
I+DR K++I G ++ E+EA L AHP++ +AAVV D+ GE P AFV G +
Sbjct: 620 ILDRSKDIIISGGENISTIEVEAALFAHPAVAEAAVVGRPDEYWGETPCAFVTLKEGKDV 441
Query: 1648 TEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
+E+ + ++ Y + FV +PK +GK+ + LR
Sbjct: 440 GAEEVMAFCRARLPRYMAPRTVVFVAELPKTATGKVQKFALR 315
Score = 42.3 bits (86), Expect(2) = 9e-005
Identities = 24/64 (37%), Positives = 31/64 (48%)
Frame = -2 / +1
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+ SS+ P + TNA G+SPQ SS TTAAS G ++P +M S
Sbjct: 424 MTSSAPTSLPSLSVTNAHGVSPQYSSGRPTTAASATAGCANSAASTSMVLMFSPPEMMMS 603
Query: 1484 LSRS 1473
L RS
Sbjct: 604 LDRS 615
Score = 28.1 bits (55), Expect(2) = 8e-016
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / -2
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GE+ RG +M GY + ATA+ +
Sbjct: 758 GEVMFRGNTVMSGYYKDAAATAEAM 684
Score = 26.3 bits (51), Expect(2) = 9e-005
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 1401 GLRRCLRVVEVPFHQLLAPDANLPGLVAVEG 1309
GLRR RV+ VP H +A + + P V G
Sbjct: 687 GLRRRRRVLVVPAHHRVATEHDFPHGAPVGG 779
>gb|CW416941.1|CW416941 fsbb001f117l12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f117l12, DNA
sequence
Length = 723
Score = 78.0 bits (164), Expect(2) = 8e-016
Identities = 35/102 (34%), Positives = 56/102 (54%)
Frame = +1 / +3
Query: 1468 IVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGI 1647
I+DR K++I G ++ E+EA L AHP++ +AAVV D+ GE P AFV G +
Sbjct: 147 ILDRSKDIIISGGENISTIEVEAALFAHPAVAEAAVVGRPDEYWGETPCAFVTLKEGKDV 326
Query: 1648 TEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
+E+ + ++ Y + FV +PK +GK+ + LR
Sbjct: 327 GAEEVMAFCRARLPRYMAPRTVVFVAELPKTATGKVQKFALR 452
Score = 42.3 bits (86), Expect(2) = 1e-004
Identities = 24/64 (37%), Positives = 31/64 (48%)
Frame = -2 / -3
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+ SS+ P + TNA G+SPQ SS TTAAS G ++P +M S
Sbjct: 343 MTSSAPTSLPSLSVTNAHGVSPQYSSGRPTTAASATAGCANSAASTSMVLMFSPPEMMMS 164
Query: 1484 LSRS 1473
L RS
Sbjct: 163 LDRS 152
Score = 28.1 bits (55), Expect(2) = 8e-016
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GE+ RG +M GY + ATA+ +
Sbjct: 9 GEVMFRGNTVMSGYYKDAAATAEAM 83
Score = 25.8 bits (50), Expect(2) = 1e-004
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1 / -2
Query: 1401 GLRRCLRVVEVPFHQLLAPDANLP 1330
GLRR RV+ VP H +A + + P
Sbjct: 80 GLRRRRRVLVVPAHHRVATEHDFP 9
>gb|BE599173.1|BE599173 PI1_86_C08.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 511
Score = 78.0 bits (164), Expect(2) = 8e-016
Identities = 35/102 (34%), Positives = 56/102 (54%)
Frame = +1 / +2
Query: 1468 IVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGI 1647
I+DR K++I G ++ E+EA L AHP++ +AAVV D+ GE P AFV G +
Sbjct: 203 ILDRSKDIIISGGENISTIEVEAALFAHPAVAEAAVVGRPDEYWGETPCAFVTLKEGKDV 382
Query: 1648 TEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
+E+ + ++ Y + FV +PK +GK+ + LR
Sbjct: 383 GAEEVMAFCRARLPRYMAPRTVVFVAELPKTATGKVQKFALR 508
Score = 42.3 bits (86), Expect(2) = 9e-005
Identities = 24/64 (37%), Positives = 31/64 (48%)
Frame = -2 / -2
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+ SS+ P + TNA G+SPQ SS TTAAS G ++P +M S
Sbjct: 399 MTSSAPTSLPSLSVTNAHGVSPQYSSGRPTTAASATAGCANSAASTSMVLMFSPPEMMMS 220
Query: 1484 LSRS 1473
L RS
Sbjct: 219 LDRS 208
Score = 28.1 bits (55), Expect(2) = 8e-016
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +2
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GE+ RG +M GY + ATA+ +
Sbjct: 65 GEVMFRGNTVMSGYYKDAAATAEAM 139
Score = 26.3 bits (51), Expect(2) = 9e-005
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / -1
Query: 1401 GLRRCLRVVEVPFHQLLAPDANLPGLVAVEG 1309
GLRR RV+ VP H +A + + P V G
Sbjct: 136 GLRRRRRVLVVPAHHRVATEHDFPHGAPVGG 44
>gb|CF432574.1|CF432574 NIT1_17_E08.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_17_E08_A002 5', mRNA sequence
Length = 590
Score = 86.8 bits (183), Expect = 1e-015
Identities = 42/107 (39%), Positives = 57/107 (53%)
Frame = +1 / +3
Query: 235 LPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAGMRACLGVRSGGTVMLL 414
L L+D + R L+D ATG++LTF A + + GVR G V+
Sbjct: 210 LSLNDLLFRRADACPSALALVDSATGQSLTFAAFRSAVLTTAVALSSRAGVRRGDVVLFF 389
Query: 415 LPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
PN + + F A + LGA ATTA+PL+TP E+AKQA S A + IT
Sbjct: 390 APNCFLYPVCFFAVTALGAVATTASPLYTPREVAKQATDSRAKLAIT 530
Score = 54.2 bits (112), Expect(2) = 7e-007
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = -2 / -2
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPR 378
+V+ ++A E+ ACLA S GV GLAVVA APR A+ + + G T P RTP
Sbjct: 532 TVIASLARESVACLATSRGV*RGLAVVATAPRAVTAKKQTG*RKQLGAKKRTTSPRRTPA 353
Query: 377 QARIPAATRR 348
+ A R
Sbjct: 352 REESATAVVR 323
Score = 24.9 bits (48), Expect(2) = 7e-007
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3 / -3
Query: 106 RAGDKRLAASGRVGGAGPGSELCAR 32
R G +R G G GPG CAR
Sbjct: 258 RRGTRRRGGRGGR*GRGPGRTRCAR 184
>gb|CW394228.1|CW394228 fsbb001f081l09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f081l09, DNA
sequence
Length = 618
Score = 83.5 bits (176), Expect(2) = 1e-015
Identities = 38/102 (37%), Positives = 56/102 (54%)
Frame = +1 / +1
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GWLHTGD+ I + DR K++I G V+ E+E +L +HP++++AAVV DD
Sbjct: 67 GWLHTGDLAVRHPDGSIQVKDRAKDIIISGGENVSSIEVETLLSSHPAVLEAAVVARPDD 246
Query: 1594 SCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFF 1719
GE P AFV G+ TE EI + +++ Y + F
Sbjct: 247 HWGETPCAFVKLKDGASATEAEIIGFCRERLPRYMAPRTVVF 372
Score = 49.6 bits (102), Expect(2) = 8e-006
Identities = 27/64 (42%), Positives = 36/64 (56%)
Frame = -2 / -2
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+IS+SV P + TNA G+SPQ SS + TTAAS G T++P +M S
Sbjct: 317 MISASVALAPSLSFTNAHGVSPQWSSGLATTAASRTAG*LDSSVSTSIELTFSPPEMMMS 138
Query: 1484 LSRS 1473
L+RS
Sbjct: 137 LARS 126
Score = 22.6 bits (43), Expect(2) = 8e-006
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -2
Query: 1433 SPVCSHP 1413
SPVCSHP
Sbjct: 86 SPVCSHP 66
Score = 22.1 bits (42), Expect(2) = 1e-015
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1 / +1
Query: 1723 EAIPKAPSGKILRKDLRAK 1779
E +PK P+GK + LR K
Sbjct: 373 EDLPKTPTGKTQKFVLREK 429
>gb|CW432107.1|CW432107 fsbb001f146k07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f146k07, DNA
sequence
Length = 593
Score = 86.3 bits (182), Expect = 1e-015
Identities = 38/92 (41%), Positives = 56/92 (60%)
Frame = +1 / -3
Query: 1348 GKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAE 1527
G +M GYLN+ EAT I +GW +TGD+G + + I DR K++I G ++ E
Sbjct: 591 GGCVMLGYLNDDEATKAAIREDGWFYTGDVGVMHPDGYLEIRDRSKDVIINAGENISSVE 412
Query: 1528 LEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFV 1623
+E++L HP++ +AAVV D+ GE P AFV
Sbjct: 411 VESVLYDHPAVNEAAVVARPDELRGETPCAFV 316
Score = 54.2 bits (112), Expect = 7e-006
Identities = 31/86 (36%), Positives = 41/86 (47%)
Frame = -2 / +2
Query: 1622 TNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSST 1443
TNA G+SP+ SS TTAAS G ++P +++SL RS +
Sbjct: 317 TNAHGVSPRNSSGRATTAASFTAG*S*STDSTSTLLMFSPALMITSLERSRISR*PSGCI 496
Query: 1442 YPMSPVCSHPSESMVFAVASGLLRYP 1365
P SPV +HPS + VAS R P
Sbjct: 497 TPTSPV*NHPSSRIAALVASSSFR*P 574
>gb|AI724956.1|AI724956 RHIZ1_31_H10.y3_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 373
Score = 86.3 bits (182), Expect = 1e-015
Identities = 34/53 (64%), Positives = 45/53 (84%)
Frame = +1 / +2
Query: 1639 SGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLASGFS 1797
S I ED IK++++KQVVFYKRLHK++F +IPK+ SGKILR++LRAKLA+ S
Sbjct: 11 SDIAEDAIKEFISKQVVFYKRLHKVYFTPSIPKSASGKILRRELRAKLAAAAS 169
Score = 55.6 bits (115), Expect = 3e-006
Identities = 26/49 (53%), Positives = 30/49 (61%)
Frame = -2 / -2
Query: 1784 ASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPE 1638
AS A S L+I PD LGM K LCSLL*NTTC L++SS + E
Sbjct: 156 ASLARSSLLRIFPDADLGMEGVKYTLCSLL*NTTCLEMNSLMASSAMSE 10
Score = 52.4 bits (108), Expect = 2e-005
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = -1 / -1
Query: 1785 RQLCSQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAG 1630
R+L + + P +L G RLGDG E LV PLVEHHL LLD +L D G G
Sbjct: 157 RELGA*LSPQDLPGRRLGDGGGEVHLV*PLVEHHLLGDELLDGILRDVGVGG 2
Score = 40.0 bits (81), Expect = 0.13
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +3 / +1
Query: 1662 QAVRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKA 1781
Q V + GGVLQEA Q +L HPQ +R+D +E + +A
Sbjct: 34 QGVHLQAGGVLQEATQGVLHPLHPQVGVREDPEERATRQA 153
>gb|CF432526.1|CF432526 NIT1_17_E08.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_17_E08_A002 3', mRNA sequence
Length = 516
Score = 86.3 bits (182), Expect = 1e-015
Identities = 33/77 (42%), Positives = 56/77 (72%)
Frame = +1 / +1
Query: 1558 IVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPK 1737
I+DA V+ D GE+P+ +VV S S +TE ++++++ KQV + K+L ++ FV+++PK
Sbjct: 4 ILDAVVIPFPDAEAGEVPIPYVVRSPVSSLTEVDVQKFIEKQVAYSKKLRRVPFVDSVPK 183
Query: 1738 APSGKILRKDLRAKLAS 1788
+ SGKILR++L AK+ S
Sbjct: 184 SASGKILRRELIAKVRS 234
Score = 49.6 bits (102), Expect = 2e-004
Identities = 29/75 (38%), Positives = 36/75 (48%)
Frame = -2 / -2
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATG 1608
D + A+ S LKI P+ G STK L + L TCF+ S+SV D TT G
Sbjct: 233 DLTLAISSLLKIFPEADFGTLSTKGTLLNFLEYATCFSINFWTSTSVKELTGDLTT*GIG 54
Query: 1607 ISPQESSFIWTTAAS 1563
SP +S T AS
Sbjct: 53 TSPASASGNGITTAS 9
>gb|CW255632.1|CW255632 104_720_11226343_116_35130_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11226343, DNA
sequence
Length = 617
Score = 60.2 bits (125), Expect(3) = 2e-015
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +1 / +3
Query: 853 DVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAV 1032
+ LC +PMFHVY L + + GA +V++ +++ M + +G+T +PLV PI V
Sbjct: 372 ETFLCTVPMFHVYGLVAFATGLLGCGATIVVLSKYELPEMLRSINEYGVTYLPLVPPILV 551
Query: 1033 EMV 1041
+M+
Sbjct: 552 DML 560
Score = 36.8 bits (74), Expect(3) = 2e-015
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1 / +3
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSV 804
L YSSGTTG KGV+ +HR L++ V
Sbjct: 252 LLYSSGTTGPSKGVVATHRSLISMV 326
Score = 35.0 bits (70), Expect(3) = 9e-005
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = -1 / -1
Query: 1038 HLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHG 874
H+ DG+HER D V + +H + + A A + +G + V VEHG
Sbjct: 557 HVDEDGRHEREVGDPVFIDGAQHLGELVLGEHDDGGAAAEQPRGEGDKAVDVEHG 393
Score = 30.9 bits (61), Expect(3) = 2e-015
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1 / +3
Query: 487 NPLHTPPEIAKQAAASGATVVIT 555
NPL+TP EIAKQ A + V T
Sbjct: 3 NPLNTPAEIAKQVADARPVVAFT 71
Score = 29.0 bits (57), Expect(3) = 9e-005
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2 / -2
Query: 554 VMTTVAPEAAACLAISGGVWSGL 486
V T +A CLAIS GV SGL
Sbjct: 70 VKATTGRASATCLAISAGVLSGL 2
Score = 26.7 bits (52), Expect(3) = 9e-005
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2 / -2
Query: 785 RCDSITPLGSPVVPDE 738
RC + TPL PVVP+E
Sbjct: 307 RCVATTPLLGPVVPEE 260
>gb|CW427570.1|CW427570 fsbb001f139k07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f139k07, DNA
sequence
Length = 446
Score = 85.8 bits (181), Expect = 2e-015
Identities = 38/66 (57%), Positives = 42/66 (63%)
Frame = +1 / +2
Query: 175 PQAETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRR 354
P A + VFRS LPDI IP HL L Y ERL E R CLIDG TG T+ DV+RLSR
Sbjct: 197 PAAASVVFRSKLPDIEIPRHLSLQAYCFERLPEVSSRPCLIDGQTGAVHTYADVERLSRT 376
Query: 355 VAAGMR 372
AA +R
Sbjct: 377 AAAALR 394
>gb|CW359304.1|CW359304 fsbb001f026n23f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f026n23, DNA
sequence
Length = 166
Score = 85.4 bits (180), Expect = 3e-015
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = +1 / +3
Query: 1246 GACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKG 1368
G+CGTVVRNAELKI+DP+T SL RNQPGEICIRG+Q+MKG
Sbjct: 3 GSCGTVVRNAELKIVDPDTSESLGRNQPGEICIRGEQIMKG 125
Score = 68.0 bits (142), Expect = 5e-010
Identities = 29/41 (70%), Positives = 30/41 (73%)
Frame = -2 / -1
Query: 1367 PFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAP 1245
PF+ C P M ISPGW R DS VSGS I SSAFLTTVPQ P
Sbjct: 124 PFMICSPRMHISPGWFRPSDSLVSGSTILSSAFLTTVPQEP 2
Score = 38.6 bits (78), Expect = 0.33
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = -1 / -3
Query: 1407 VDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHRAAG 1249
V G R+ + + FH L A DA L LV+ + G+ VDDL L +P AAG
Sbjct: 164 VSGKRQESKGLGGTFHDLFAADAYLAWLVSSQRLAGVWVDDLELRVPDDGAAG 6
Score = 36.8 bits (74), Expect = 1.2
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3 / +2
Query: 1245 RCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQGQAVDER 1367
R LRH +E A+D RP + V +PAR D+H + ER
Sbjct: 2 RLLRHRRQERGAQDRRPRHQRVAGTKPARRDMHPRRTNHER 124
>gb|BZ344833.1|BZ344833 hr40h09.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hr40h09 5', DNA sequence
Length = 424
Score = 84.9 bits (179), Expect = 4e-015
Identities = 36/88 (40%), Positives = 55/88 (62%)
Frame = +1 / +2
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGF 1509
GEI +RG +M GYLN+ EAT I +GW +TGD+G + + I DR K++I G
Sbjct: 161 GEIVVRGGCVMLGYLNDDEATKAAIREDGWFYTGDVGVMHPDGYLEIRDRSKDVIINAGE 340
Query: 1510 QVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
++ E+E++L HP++ +AAVV D+
Sbjct: 341 NISSVEVESVLYDHPAVNEAAVVARPDE 424
Score = 44.1 bits (90), Expect = 0.007
Identities = 27/83 (32%), Positives = 36/83 (43%)
Frame = -2 / -2
Query: 1577 TTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMV 1398
TTAAS G ++P +++SL RS + P SPV +HPS +
Sbjct: 408 TTAASFTAG*S*STDSTSTLLMFSPALMITSLERSRISR*PSGCITPTSPV*NHPSSRIA 229
Query: 1397 FAVASGLLRYPFINCLPLMQISP 1329
VAS R P + P ISP
Sbjct: 228 ALVASSSFR*PSMTQPPRTTISP 160
>gb|CW141369.1|CW141369 104_532_11136279_116_34934_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136279, DNA
sequence
Length = 631
Score = 84.9 bits (179), Expect = 4e-015
Identities = 41/102 (40%), Positives = 54/102 (52%)
Frame = +1 / -1
Query: 235 LPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAGMRACLGVRSGGTVMLL 414
L L+D + R L+D ATG++LTF A + + GVR G V+
Sbjct: 316 LSLNDLLFRRADACPSALALVDSATGQSLTFAAFRSAVLTTAVALSSRAGVRRGDVVLFF 137
Query: 415 LPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGA 540
PN + + F A + LGA ATTANPL+TP E+AKQA S A
Sbjct: 136 APNCFLYPVCFFAVTALGAVATTANPLYTPREVAKQATDSRA 11
Score = 51.5 bits (106), Expect(2) = 5e-006
Identities = 27/66 (40%), Positives = 34/66 (51%)
Frame = -2 / +3
Query: 545 TVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPRQARI 366
++A E+ ACLA S GV GLAVVA APR A+ + + G T P RTP +
Sbjct: 6 SLARESVACLATSRGV*RGLAVVATAPRAVTAKKQTG*RKQLGAKKRTTSPRRTPAREES 185
Query: 365 PAATRR 348
A R
Sbjct: 186 ATAVVR 203
Score = 24.9 bits (48), Expect(2) = 5e-006
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3 / +1
Query: 106 RAGDKRLAASGRVGGAGPGSELCAR 32
R G +R G G GPG CAR
Sbjct: 268 RRGTRRRGGRGGR*GRGPGRTRCAR 342
>gb|CW271687.1|CW271687 104_744_11403133_116_35346_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403133, DNA
sequence
Length = 627
Score = 43.2 bits (88), Expect(3) = 5e-015
Identities = 17/36 (47%), Positives = 27/36 (75%)
Frame = +1 / -3
Query: 1681 QVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLAS 1788
QV YKRL K+ V+++PK+ +GK LR++L A++ S
Sbjct: 175 QVAHYKRLRKVKSVDSVPKSAAGKTLRRELIAQVRS 68
Score = 43.2 bits (88), Expect(3) = 5e-015
Identities = 15/24 (62%), Positives = 22/24 (91%)
Frame = +1 / -1
Query: 1507 FQVAPAELEAMLIAHPSIVDAAVV 1578
+Q+APAELE +L++HP I+DAAV+
Sbjct: 621 WQIAPAELEGLLLSHPEILDAAVI 550
Score = 40.0 bits (81), Expect(3) = 5e-015
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1 / -2
Query: 1588 DDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKR 1701
D GE+P+A+VV S S + E ++++++ KQV+ R
Sbjct: 461 DPEAGEVPIAYVVRSPKSSLAEVDVQKFIEKQVMLASR 348
>gb|CW231701.1|CW231701 104_681_11211263_148_37351_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11211263, DNA
sequence
Length = 594
Score = 64.8 bits (135), Expect(2) = 7e-015
Identities = 27/82 (32%), Positives = 44/82 (53%)
Frame = +1 / -2
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GW H+GD+G + + DR K++I G ++ E+E + HP++++A+VV D+
Sbjct: 359 GWFHSGDLGVRHGDGYVEVRDRAKDIIISGGENISSLEVEKAVYLHPAVLEASVVARADE 180
Query: 1594 SCGEIPVAFVVASGGSGITEDE 1659
GE P AFV + DE
Sbjct: 179 QWGESPCAFVTLKDAAVDRSDE 114
Score = 38.2 bits (77), Expect(2) = 7e-015
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1 / -2
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDS 1410
GEI +RG +MKGYL NP A A+ ++
Sbjct: 440 GEIVMRGNGVMKGYLKNPRANAEAFEN 360
>gb|CW408015.1|CW408015 fsbb001f101l18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f101l18, DNA
sequence
Length = 729
Score = 65.7 bits (137), Expect(2) = 1e-014
Identities = 34/93 (36%), Positives = 48/93 (51%)
Frame = +1 / +3
Query: 850 DDVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIA 1029
D+V L LPMFHVY L + + G+ +V+MKRFD + + R +T P+V PI
Sbjct: 279 DNVYLAALPMFHVYGLALFAVGLLSLGSTVVVMKRFDAGDAVKAIHRFKVTHFPVVPPIM 458
Query: 1030 VEMVKSDAIDRHDLSSVRMVISGAAPMGKELQD 1128
+V + L S+ V +GAAP L D
Sbjct: 459 AALVHATKPAAMPLESLVQVSTGAAPSSGRLID 557
Score = 45.5 bits (93), Expect(2) = 6e-007
Identities = 28/86 (32%), Positives = 36/86 (41%)
Frame = -2 / -3
Query: 1106 GAAPEMTMRTDERSWRSMASLLTISTAMGSTSGTIVMPCLFTSSNMRRVSKRFMITSAAP 927
GAAP T D + T + MG T+G V L+ + S FM T+ P
Sbjct: 535 GAAPVDTCTKDSNGIAAGLVACTRAAMMGGTTGKCVTLNLWMALTASPASNLFMTTTVEP 356
Query: 926 ARIPHSRMECSEYTWNMGSTQRTTSS 849
+ + S TWNMGS R T S
Sbjct: 355 SESRPTAKSASP*TWNMGSAAR*TLS 278
Score = 38.6 bits (78), Expect = 0.33
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -1 / -2
Query: 1026 DGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHGQ 871
DG+++R RD + L VE LHD R A + + V VEHGQ
Sbjct: 455 DGRNDREVRDLESVDGLNGVARVEPLHDDHRGTEREQAHGEERESVDVEHGQ 300
Score = 36.8 bits (74), Expect(2) = 1e-014
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1 / +3
Query: 736 YSSGTTGLPKGVMLSHRGLVTSVAQLV 816
YSSGT G KGV+L+HR L+ +V V
Sbjct: 162 YSSGTGGRSKGVVLTHRNLIATVELFV 242
Score = 30.4 bits (60), Expect(2) = 6e-007
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2 / -3
Query: 824 SPSTSCATLVTSPRCDSITPLGSPVVPDE 738
S T +T+ RC S TPL P VPDE
Sbjct: 250 SKRTKSSTVAMRLRCVSTTPLLRPPVPDE 164
>gb|CW230339.1|CW230339 104_679_11210489_116_37331_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11210489, DNA
sequence
Length = 595
Score = 83.1 bits (175), Expect = 1e-014
Identities = 36/102 (35%), Positives = 57/102 (55%)
Frame = +1 / -2
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GWLHTGD+ I + DR K++I G ++ E+E+++ +HP++++AAVV DD
Sbjct: 570 GWLHTGDLAVRHPDGYIELKDRAKDIIISGGENISSIEVESVIFSHPAVLEAAVVARPDD 391
Query: 1594 SCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFF 1719
GE P AFV G+ TE EI + +++ Y + F
Sbjct: 390 HWGETPCAFVKLKDGASATEAEIISFCRERLPHYMAPKTVVF 265
Score = 66.1 bits (138), Expect = 2e-009
Identities = 34/84 (40%), Positives = 43/84 (51%)
Frame = -2 / +2
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+IS+SV P + TNA G+SPQ SS TTAAS GW ++P +M S
Sbjct: 320 MISASVALAPSLSLTNAHGVSPQWSSGRATTAASRTAGWLKITDSTSMELMFSPPEMMMS 499
Query: 1484 LSRSTMKISSPSSTYPMSPVCSHP 1413
L+RS + SPVCSHP
Sbjct: 500 LARSLSSMYPSGCRTARSPVCSHP 571
>gb|CD235758.1|CD235758 SS1_37_F06.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_37_F06_A012 5', mRNA sequence
Length = 597
Score = 82.2 bits (173), Expect = 3e-014
Identities = 41/76 (53%), Positives = 47/76 (61%)
Frame = +1 / +1
Query: 340 RLSRRVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAK 519
RL R AA LGV G VM+LL NSVEF L FL S LGA T ANP TP EI K
Sbjct: 271 RLLCRKAAASLHGLGVGHGDRVMILLQNSVEFVLTFLGASFLGAVTTAANPFCTPLEIHK 450
Query: 520 QAAASGATVVITEPAF 567
Q ASGA +++T+ A+
Sbjct: 451 QFRASGAKLIVTQSAY 498
Score = 76.2 bits (160), Expect = 2e-012
Identities = 33/62 (53%), Positives = 38/62 (61%)
Frame = +1 / +1
Query: 184 ETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAA 363
E TVFRS LPDI I HLPLH+Y R AE D CLI ATG T T+ + L R+ AA
Sbjct: 118 EETVFRSKLPDIDIASHLPLHEYCFARAAEVADAPCLIAAATGRTYTYAETRLLCRKAAA 297
Query: 364 GM 369
+
Sbjct: 298 SL 303
Score = 64.3 bits (134), Expect(2) = 4e-010
Identities = 33/72 (45%), Positives = 38/72 (52%)
Frame = -2 / -2
Query: 554 VMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPRQ 375
V ++APEA CL IS GV +GLA V APR + R S NSTEF +T P TP
Sbjct: 485 VTMSLAPEALNCLWISSGVQNGLAAVVTAPRNDAPRKVSTNSTEFWSRIMTRSPWPTPSP 306
Query: 374 ARIPAATRRDRR 339
AA R R
Sbjct: 305 CSDAAALRHRSR 270
Score = 22.6 bits (43), Expect(2) = 4e-010
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2 / -2
Query: 221 AMSGSVERNTVVS 183
+MSGS +RNTV S
Sbjct: 155 SMSGSFDRNTVSS 117
>gb|CX608451.1|CX608451 ANR1_38_E05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_38_E05_A002 5', mRNA sequence
Length = 625
Score = 82.2 bits (173), Expect = 3e-014
Identities = 41/76 (53%), Positives = 47/76 (61%)
Frame = +1 / +2
Query: 340 RLSRRVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAK 519
RL R AA LGV G VM+LL NSVEF L FL S LGA T ANP TP EI K
Sbjct: 257 RLLCRKAAASLHGLGVGHGDRVMILLQNSVEFVLTFLGASFLGAVTTAANPFCTPLEIHK 436
Query: 520 QAAASGATVVITEPAF 567
Q ASGA +++T+ A+
Sbjct: 437 QFRASGAKLIVTQSAY 484
Score = 76.2 bits (160), Expect = 2e-012
Identities = 33/62 (53%), Positives = 38/62 (61%)
Frame = +1 / +2
Query: 184 ETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAA 363
E TVFRS LPDI I HLPLH+Y R AE D CLI ATG T T+ + L R+ AA
Sbjct: 104 EETVFRSKLPDIDIASHLPLHEYCFARAAEVADAPCLIAAATGRTYTYAETRLLCRKAAA 283
Query: 364 GM 369
+
Sbjct: 284 SL 289
Score = 64.3 bits (134), Expect(3) = 6e-012
Identities = 33/72 (45%), Positives = 38/72 (52%)
Frame = -2 / -2
Query: 554 VMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPRQ 375
V ++APEA CL IS GV +GLA V APR + R S NSTEF +T P TP
Sbjct: 471 VTMSLAPEALNCLWISSGVQNGLAAVVTAPRNDAPRKVSTNSTEFWSRIMTRSPWPTPSP 292
Query: 374 ARIPAATRRDRR 339
AA R R
Sbjct: 291 CSDAAALRHRSR 256
Score = 23.1 bits (44), Expect(3) = 6e-012
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1 / -1
Query: 666 VGGGSEVGERDAALCAVARGDDGDAGE 586
VGG ++ E AA V DG+ GE
Sbjct: 625 VGGRDQLPEGQAAFRGVGHVVDGEDGE 545
Score = 22.6 bits (43), Expect(3) = 6e-012
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2 / -2
Query: 221 AMSGSVERNTVVS 183
+MSGS +RNTV S
Sbjct: 141 SMSGSFDRNTVSS 103
>gb|CX619759.1|CX619759 GABR1_47_D08.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_47_D08_A002 5', mRNA sequence
Length = 653
Score = 82.2 bits (173), Expect = 3e-014
Identities = 41/76 (53%), Positives = 47/76 (61%)
Frame = +1 / +2
Query: 340 RLSRRVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAK 519
RL R AA LGV G VM+LL NSVEF L FL S LGA T ANP TP EI K
Sbjct: 245 RLLCRKAAASLHGLGVGHGDRVMILLQNSVEFVLTFLGASFLGAVTTAANPFCTPLEIHK 424
Query: 520 QAAASGATVVITEPAF 567
Q ASGA +++T+ A+
Sbjct: 425 QFRASGAKLIVTQSAY 472
Score = 73.0 bits (153), Expect = 1e-011
Identities = 32/62 (51%), Positives = 37/62 (59%)
Frame = +1 / +2
Query: 184 ETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAA 363
E TVFRS LPDI I HLPLH+Y R AE D CLI AT T T+ + L R+ AA
Sbjct: 92 EETVFRSKLPDIDIASHLPLHEYCFSRAAEVADAPCLIAAATERTYTYAETRLLCRKAAA 271
Query: 364 GM 369
+
Sbjct: 272 SL 277
Score = 64.3 bits (134), Expect(3) = 2e-012
Identities = 33/72 (45%), Positives = 38/72 (52%)
Frame = -2 / -3
Query: 554 VMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPRQ 375
V ++APEA CL IS GV +GLA V APR + R S NSTEF +T P TP
Sbjct: 459 VTMSLAPEALNCLWISSGVQNGLAAVVTAPRNDAPRKVSTNSTEFWSRIMTRSPWPTPSP 280
Query: 374 ARIPAATRRDRR 339
AA R R
Sbjct: 279 CSDAAALRHRSR 244
Score = 24.4 bits (47), Expect(3) = 2e-012
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1 / -2
Query: 669 IVGGGSEVGERDAALCAVARGDDGDAGE 586
+VGG ++ E AA V DG+ GE
Sbjct: 616 VVGGRDQLPEGQAAFRGVGHVVDGEDGE 533
Score = 22.6 bits (43), Expect(3) = 2e-012
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2 / -3
Query: 221 AMSGSVERNTVVS 183
+MSGS +RNTV S
Sbjct: 129 SMSGSFDRNTVSS 91
>gb|CW408016.1|CW408016 fsbb001f101l18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f101l18, DNA
sequence
Length = 752
Score = 65.7 bits (137), Expect(2) = 3e-014
Identities = 34/93 (36%), Positives = 48/93 (51%)
Frame = +1 / -3
Query: 850 DDVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIA 1029
D+V L LPMFHVY L + + G+ +V+MKRFD + + R +T P+V PI
Sbjct: 579 DNVYLAALPMFHVYGLALFAVGLLSLGSTVVVMKRFDAGDAVKAIHRFKVTHFPVVPPIM 400
Query: 1030 VEMVKSDAIDRHDLSSVRMVISGAAPMGKELQD 1128
+V + L S+ V +GAAP L D
Sbjct: 399 AALVHATKPAAMPLESLVQVSTGAAPSSGRLID 301
Score = 45.5 bits (93), Expect(2) = 2e-006
Identities = 28/86 (32%), Positives = 36/86 (41%)
Frame = -2 / +2
Query: 1106 GAAPEMTMRTDERSWRSMASLLTISTAMGSTSGTIVMPCLFTSSNMRRVSKRFMITSAAP 927
GAAP T D + T + MG T+G V L+ + S FM T+ P
Sbjct: 323 GAAPVDTCTKDSNGIAAGLVACTKAAMMGGTTGKCVTLNLWMALTASPASNLFMTTTVEP 502
Query: 926 ARIPHSRMECSEYTWNMGSTQRTTSS 849
+ + S TWNMGS R T S
Sbjct: 503 SESRPTAKSASP*TWNMGSAAR*TLS 580
Score = 38.6 bits (78), Expect = 0.33
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -1 / +1
Query: 1026 DGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHGQ 871
DG+++R RD + L VE LHD R A + + V VEHGQ
Sbjct: 403 DGRNDREVRDLESVDGLNGVARVEPLHDDHRGTEREQAHGEERESVDVEHGQ 558
Score = 35.0 bits (70), Expect(2) = 3e-014
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1 / -3
Query: 736 YSSGTTGLPKGVMLSHRGLVTSVAQLV 816
YSSGT G KGV+ +HR L+ +V V
Sbjct: 696 YSSGTGGRSKGVVFTHRNLIATVELFV 616
Score = 29.0 bits (57), Expect(2) = 2e-006
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2 / +2
Query: 824 SPSTSCATLVTSPRCDSITPLGSPVVPDE 738
S T +T+ RC + TPL P VPDE
Sbjct: 608 SKRTKSSTVAMRLRCVNTTPLLRPPVPDE 694
>gb|BE599008.1|BE599008 PI1_86_C08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 577
Score = 78.0 bits (164), Expect(2) = 5e-014
Identities = 35/102 (34%), Positives = 56/102 (54%)
Frame = +1 / +2
Query: 1468 IVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGI 1647
I+DR K++I G ++ E+EA L AHP++ +AAVV D+ GE P AFV G +
Sbjct: 119 ILDRSKDIIISGGENISTIEVEAALFAHPAVAEAAVVGRPDEYWGETPCAFVTLKEGKDV 298
Query: 1648 TEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
+E+ + ++ Y + FV +PK +GK+ + LR
Sbjct: 299 GAEEVMAFCRARLPRYMAPRTVVFVAELPKTATGKVQKFALR 424
Score = 42.3 bits (86), Expect = 0.026
Identities = 24/64 (37%), Positives = 31/64 (48%)
Frame = -2 / -2
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+ SS+ P + TNA G+SPQ SS TTAAS G ++P +M S
Sbjct: 315 MTSSAPTSLPSLSVTNAHGVSPQYSSGRPTTAASATAGCANSAASTSMVLMFSPPEMMMS 136
Query: 1484 LSRS 1473
L RS
Sbjct: 135 LDRS 124
Score = 22.1 bits (42), Expect(2) = 5e-014
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3 / +1
Query: 1359 DERVPQQPGGNGEDH 1403
DERV Q GG+G H
Sbjct: 10 DERVLQGRGGDGGGH 54
>gb|CW215264.1|CW215264 104_647_11194448_148_37463_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194448, DNA
sequence
Length = 572
Score = 78.0 bits (164), Expect(2) = 5e-014
Identities = 35/102 (34%), Positives = 56/102 (54%)
Frame = +1 / +3
Query: 1468 IVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGI 1647
I+DR K++I G ++ E+EA L AHP++ +AAVV D+ GE P AFV G +
Sbjct: 126 ILDRSKDIIISGGENISTIEVEAALFAHPAVAEAAVVGRPDEYWGETPCAFVTLKEGKDV 305
Query: 1648 TEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
+E+ + ++ Y + FV +PK +GK+ + LR
Sbjct: 306 GAEEVMAFCRARLPRYMAPRTVVFVAELPKTATGKVQKFALR 431
Score = 42.3 bits (86), Expect(2) = 0.001
Identities = 24/64 (37%), Positives = 31/64 (48%)
Frame = -2 / -2
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+ SS+ P + TNA G+SPQ SS TTAAS G ++P +M S
Sbjct: 322 MTSSAPTSLPSLSVTNAHGVSPQYSSGRPTTAASATAGCANSAASTSMVLMFSPPEMMMS 143
Query: 1484 LSRS 1473
L RS
Sbjct: 142 LDRS 131
Score = 22.6 bits (43), Expect(2) = 0.001
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2 / -2
Query: 1406 SMVFAVASGLLRYPFINCLP 1347
+M AVA+ L YP I LP
Sbjct: 64 AMASAVAAASL*YPLITVLP 5
Score = 22.1 bits (42), Expect(2) = 5e-014
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1 / +3
Query: 1345 RGKQLMKGYLNNPEATAKTI 1404
RG +M GY + ATA+ +
Sbjct: 3 RGNTVMSGYYKDAAATAEAM 62
>gb|BZ346611.1|BZ346611 hv82a12.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hv82a12 5', DNA sequence
Length = 392
Score = 81.3 bits (171), Expect = 5e-014
Identities = 30/50 (60%), Positives = 38/50 (76%)
Frame = +1 / +1
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQV 1515
GY N EAT T+ +GWL TGD+ Y+D+ +F+VDRLKELIKYKG+QV
Sbjct: 7 GYFKNTEATQSTLTPDGWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQV 156
Score = 48.7 bits (100), Expect = 3e-004
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = -2 / -1
Query: 1505 PLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYP 1365
PLYL++S RST K SS SPV SHPS V VAS L+YP
Sbjct: 146 PLYLINSFRRSTTKRYPSSSM*QRSPVLSHPSGVNVDCVASVFLKYP 6
>gb|CL152124.1|CL152124 104_335_10779736_116_31364_136 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779736, DNA
sequence
Length = 513
Score = 81.3 bits (171), Expect = 5e-014
Identities = 30/50 (60%), Positives = 38/50 (76%)
Frame = +1 / +3
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQV 1515
GY N EAT T+ +GWL TGD+ Y+D+ +F+VDRLKELIKYKG+QV
Sbjct: 207 GYFKNTEATQSTLTPDGWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQV 356
Score = 48.7 bits (100), Expect = 3e-004
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = -2 / -3
Query: 1505 PLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYP 1365
PLYL++S RST K SS SPV SHPS V VAS L+YP
Sbjct: 346 PLYLINSFRRSTTKRYPSSSM*QRSPVLSHPSGVNVDCVASVFLKYP 206
>gb|CW059926.1|CW059926 104_303_10519581_5_30087 Sorghum methylation filtered library (LibID:
104) Sorghum bicolor genomic clone 10519581, DNA sequence
Length = 556
Score = 81.3 bits (171), Expect = 5e-014
Identities = 30/50 (60%), Positives = 38/50 (76%)
Frame = +1 / +1
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQV 1515
GY N EAT T+ +GWL TGD+ Y+D+ +F+VDRLKELIKYKG+QV
Sbjct: 19 GYFKNTEATQSTLTPDGWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQV 168
Score = 48.7 bits (100), Expect = 3e-004
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = -2 / -3
Query: 1505 PLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYP 1365
PLYL++S RST K SS SPV SHPS V VAS L+YP
Sbjct: 158 PLYLINSFRRSTTKRYPSSSM*QRSPVLSHPSGVNVDCVASVFLKYP 18
>gb|CW130609.1|CW130609 104_513_11115210_148_34779_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11115210, DNA
sequence
Length = 656
Score = 81.3 bits (171), Expect = 5e-014
Identities = 30/50 (60%), Positives = 38/50 (76%)
Frame = +1 / +3
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQV 1515
GY N EAT T+ +GWL TGD+ Y+D+ +F+VDRLKELIKYKG+QV
Sbjct: 348 GYFKNTEATQSTLTPDGWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQV 497
Score = 48.7 bits (100), Expect = 3e-004
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = -2 / -2
Query: 1505 PLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYP 1365
PLYL++S RST K SS SPV SHPS V VAS L+YP
Sbjct: 487 PLYLINSFRRSTTKRYPSSSM*QRSPVLSHPSGVNVDCVASVFLKYP 347
>gb|CW213087.1|CW213087 104_644_11191363_116_37026_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11191363, DNA
sequence
Length = 670
Score = 81.3 bits (171), Expect = 5e-014
Identities = 30/50 (60%), Positives = 38/50 (76%)
Frame = +1 / -1
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQV 1515
GY N EAT T+ +GWL TGD+ Y+D+ +F+VDRLKELIKYKG+QV
Sbjct: 166 GYFKNTEATQSTLTPDGWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQV 17
Score = 48.7 bits (100), Expect = 3e-004
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = -2 / +3
Query: 1505 PLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYP 1365
PLYL++S RST K SS SPV SHPS V VAS L+YP
Sbjct: 27 PLYLINSFRRSTTKRYPSSSM*QRSPVLSHPSGVNVDCVASVFLKYP 167
>gb|CW315075.1|CW315075 104_806_11472165_148_35827_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472165, DNA
sequence
Length = 686
Score = 81.3 bits (171), Expect = 5e-014
Identities = 30/50 (60%), Positives = 38/50 (76%)
Frame = +1 / +3
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQV 1515
GY N EAT T+ +GWL TGD+ Y+D+ +F+VDRLKELIKYKG+QV
Sbjct: 513 GYFKNTEATQSTLTPDGWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQV 662
Score = 48.7 bits (100), Expect = 3e-004
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = -2 / -2
Query: 1505 PLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYP 1365
PLYL++S RST K SS SPV SHPS V VAS L+YP
Sbjct: 652 PLYLINSFRRSTTKRYPSSSM*QRSPVLSHPSGVNVDCVASVFLKYP 512
>gb|CW023465.1|CW023465 104_163_10432464_1_30001 Sorghum methylation filtered library (LibID:
104) Sorghum bicolor genomic clone 10432464, DNA sequence
Length = 530
Score = 67.5 bits (141), Expect(2) = 7e-014
Identities = 29/88 (32%), Positives = 50/88 (56%)
Frame = +1 / -1
Query: 904 ILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAVEMVKSDAIDRHDLSSVR 1083
++L + G V+M RFD + ++R+ +T++P P+ V M+KS+ R DLSS+
Sbjct: 527 MMLRSVAMGETAVLMARFDFVAALRAIERYRVTLLPAAPPVLVAMIKSEEARRRDLSSLI 348
Query: 1084 MVISGAAPMGKELQDLLRAKLPRAVLGQ 1167
++ G AP+G+E+ + A P L Q
Sbjct: 347 VIGIGGAPLGREVAERFAAIFPNIELVQ 264
Score = 46.0 bits (94), Expect = 0.002
Identities = 26/78 (33%), Positives = 40/78 (51%)
Frame = -2 / +1
Query: 1160 STARGSLARSRSCSSLPMGAAPEMTMRTDERSWRSMASLLTISTAMGSTSGTIVMPCLFT 981
S+ G +A RS +S P GA P +ERS R +S L ++T+ G +G+ V
Sbjct: 271 SSMLGKMAAKRSATSRPSGAPPIPMTMREERSRRRASSDLIMATSTGGAAGSRVTRYRSM 450
Query: 980 SSNMRRVSKRFMITSAAP 927
+ + SKR M T+ +P
Sbjct: 451 ARSAATKSKRAMRTAVSP 504
Score = 36.8 bits (74), Expect = 1.2
Identities = 22/77 (28%), Positives = 31/77 (40%)
Frame = -1 / +3
Query: 1173 ITLSEHGARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGVALDHLHRDGQHERHDRDA 994
+ L E E G + + L A R D EV A + LDH H+ D+
Sbjct: 258 LNLDEFDVGEDGGEALGDLAAEWRAADPDDDEGGEVAAARLLGLDHGHQHRGGRGQQGDS 437
Query: 993 VPLHQLEHAESVEALHD 943
VPL + + VE H+
Sbjct: 438 VPLDGAQRGDEVETGHE 488
Score = 35.4 bits (71), Expect(2) = 7e-014
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1 / -1
Query: 1246 GACGTVVRNAELKIIDPETGLSLHRNQPGEICIR 1347
G+ G + + E KI+DP TG +L Q GE+ +R
Sbjct: 104 GSVGKLASHLEAKIVDPSTGEALGPGQRGELWVR 3
>gb|BM318057.1|BM318057 PI1_78_A06.g9_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 291
Score = 80.3 bits (169), Expect = 9e-014
Identities = 34/83 (40%), Positives = 50/83 (60%)
Frame = +1 / +2
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GWLHTGD+ I + DR K++I G ++ E+E+++ +HP++++AAVV DD
Sbjct: 32 GWLHTGDLAVRHPDGYIELKDRAKDIIISGGENISSIEVESVIFSHPAVLEAAVVARPDD 211
Query: 1594 SCGEIPVAFVVASGGSGITEDEI 1662
GE P AFV G+ TE EI
Sbjct: 212 HWGETPCAFVKLKDGASATEAEI 280
Score = 66.1 bits (138), Expect = 2e-009
Identities = 34/84 (40%), Positives = 43/84 (51%)
Frame = -2 / -1
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+IS+SV P + TNA G+SPQ SS TTAAS GW ++P +M S
Sbjct: 282 MISASVALAPSLSLTNAHGVSPQWSSGRATTAASRTAGWLKITDSTSMELMFSPPEMMMS 103
Query: 1484 LSRSTMKISSPSSTYPMSPVCSHP 1413
L+RS + SPVCSHP
Sbjct: 102 LARSLSSMYPSGCRTARSPVCSHP 31
>gb|CW247168.1|CW247168 104_708_11221650_116_35018_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221650, DNA
sequence
Length = 665
Score = 71.2 bits (149), Expect(2) = 1e-013
Identities = 31/69 (44%), Positives = 42/69 (60%)
Frame = +1 / +1
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GWL TGD+G I I DR K++I G ++ E+E++L HP+++DAAVV DD
Sbjct: 457 GWLRTGDLGVRHRDGYIQIKDRSKDIIISGGENISSIEVESVLFGHPAVLDAAVVARPDD 636
Query: 1594 SCGEIPVAF 1620
GE P AF
Sbjct: 637 HWGETPCAF 663
Score = 53.8 bits (111), Expect = 9e-006
Identities = 30/82 (36%), Positives = 40/82 (48%)
Frame = -2 / -1
Query: 1622 TNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSST 1443
TNA G+SPQ SS + TTAAS+ G ++P +M SL RS + +
Sbjct: 665 TNAHGVSPQWSSGLATTAASSTAGCPNSTDSTSMELMFSPPEMMMSLDRSLIWMYPSRWR 486
Query: 1442 YPMSPVCSHPSESMVFAVASGL 1377
P SPV SHP + A+ L
Sbjct: 485 TPRSPVRSHPPRTASSVAAASL 420
Score = 27.6 bits (54), Expect(2) = 1e-013
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1 / +1
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GE+ +RG +M GY + AT + +
Sbjct: 376 GEVMLRGNTVMSGYYKDAAATEEAV 450
>gb|CW262711.1|CW262711 104_730_11230230_116_35224_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11230230, DNA
sequence
Length = 609
Score = 75.3 bits (158), Expect(2) = 1e-013
Identities = 33/86 (38%), Positives = 51/86 (59%)
Frame = +1 / -2
Query: 1384 EATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIV 1563
+AT I +GW +TGD+G + + I DR K++I G ++ E+E++L +HP++
Sbjct: 599 KATGAAIREDGWFYTGDVGVMHPDGYMEIRDRSKDVIISGGENISSVEVESVLYSHPAVN 420
Query: 1564 DAAVVQMKDDSCGEIPVAFVVASGGS 1641
+AAVV DD GE P AFV G+
Sbjct: 419 EAAVVARPDDFWGETPCAFVGLKEGA 342
Score = 61.1 bits (127), Expect = 6e-008
Identities = 31/84 (36%), Positives = 43/84 (51%)
Frame = -2 / +1
Query: 1637 PPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKIS 1458
P + TNA G+SPQ+SS TTAAS GW ++P +++SL RS + +
Sbjct: 346 PSLSPTNAHGVSPQKSSGRATTAASFTAGWL*STDSTSTLLMFSPPLMITSLDRSRISMY 525
Query: 1457 SPSSTYPMSPVCSHPSESMVFAVA 1386
P SPV +HPS + VA
Sbjct: 526 PSGCITPTSPV*NHPSSRIAAPVA 597
Score = 23.5 bits (45), Expect(2) = 1e-013
Identities = 10/48 (20%), Positives = 23/48 (47%)
Frame = +1 / -2
Query: 1630 SGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
+ +T ++ + +++ Y + F + +PK +GKI + LR
Sbjct: 344 ASAGAVTAADVIAWCRQRMPHYMVPRTVVFRDELPKTSTGKIQKYVLR 201
>gb|CW788141.1|CW788141 SP__Ba0042B06.r SP__Ba Sorghum propinquum genomic clone SP__Ba0042B06
3', DNA sequence
Length = 853
Score = 78.5 bits (165), Expect(2) = 2e-013
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = +1 / +2
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQV 1515
+GWLHTGDIGY D+G ++F+VDRLKELIKYKGFQV
Sbjct: 254 QGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQV 358
Score = 54.7 bits (113), Expect = 5e-006
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = -2 / -2
Query: 1514 TWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHP 1413
T PLYL+SSLS ST K PSS YP+SPVC+HP
Sbjct: 357 T*KPLYLISSLSLSTTKS*PPSSKYPISPVCNHP 256
Score = 24.0 bits (46), Expect(2) = 2e-013
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1 / +2
Query: 1498 YKGFQVAPAELEAMLIAH 1551
Y +Q+APAEL +L++H
Sbjct: 800 YFFWQIAPAEL*RLLLSH 853
>gb|CW416942.1|CW416942 fsbb001f117l12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f117l12, DNA
sequence
Length = 791
Score = 78.0 bits (164), Expect(3) = 2e-013
Identities = 35/102 (34%), Positives = 56/102 (54%)
Frame = +1 / -2
Query: 1468 IVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGI 1647
I+DR K++I G ++ E+EA L AHP++ +AAVV D+ GE P AFV G +
Sbjct: 682 ILDRSKDIIISGGENISTIEVEAALFAHPAVAEAAVVGRPDEYWGETPCAFVTLKEGKDV 503
Query: 1648 TEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
+E+ + ++ Y + FV +PK +GK+ + LR
Sbjct: 502 GAEEVMAFCRARLPRYMAPRTVVFVAELPKTATGKVQKFALR 377
Score = 42.3 bits (86), Expect = 0.026
Identities = 24/64 (37%), Positives = 31/64 (48%)
Frame = -2 / +3
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+ SS+ P + TNA G+SPQ SS TTAAS G ++P +M S
Sbjct: 486 MTSSAPTSLPSLSVTNAHGVSPQYSSGRPTTAASATAGCANSAASTSMVLMFSPPEMMMS 665
Query: 1484 LSRS 1473
L RS
Sbjct: 666 LDRS 677
Score = 21.7 bits (41), Expect(3) = 2e-013
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1 / -2
Query: 1414 GWLHTGDIGYVDDGD 1458
GWL +GD+ GD
Sbjct: 739 GWLRSGDLAVRHAGD 695
Score = 21.7 bits (41), Expect(3) = 2e-013
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3 / -1
Query: 1359 DERVPQQPGGNGEDH 1403
DERV Q GG+G H
Sbjct: 791 DERVLQGRGGDGGAH 747
>gb|CW234719.1|CW234719 104_688_11214180_148_37391_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214180, DNA
sequence
Length = 631
Score = 70.3 bits (147), Expect(2) = 3e-013
Identities = 31/82 (37%), Positives = 46/82 (56%)
Frame = +1 / -2
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GWL +GD+ + I+DR K++I G ++ E+EA L AHP++ +AAVV D+
Sbjct: 309 GWLRSGDLAVRHRDGYVKIMDRSKDIIISGGENISTIEVEAALFAHPAVAEAAVVARPDE 130
Query: 1594 SCGEIPVAFVVASGGSGITEDE 1659
GE P AFV G+ +E
Sbjct: 129 YWGETPCAFVTLRDGTDAVGEE 64
Score = 52.4 bits (108), Expect = 2e-005
Identities = 32/94 (34%), Positives = 40/94 (42%)
Frame = -2 / +2
Query: 1658 SSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLS 1479
SS P + TNA G+SPQ SS + TTAAS G ++P +M SL
Sbjct: 65 SSPTASVPSLSVTNAHGVSPQYSSGLATTAASATAGCAKSAASTSMVLMFSPPEMMMSLE 244
Query: 1478 RSTMKISSPSSTYPMSPVCSHPSESMVFAVASGL 1377
RS + SP SHP S A+ L
Sbjct: 245 RSMILTYPSRCLTARSPDRSHPPASASAVAAASL 346
Score = 27.2 bits (53), Expect(2) = 3e-013
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / -2
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GEI +RG + GY + ATA+ +
Sbjct: 390 GEIMLRGNTVTSGYYKDAAATAEAL 316
>gb|CW053185.1|CW053185 104_293_10515824_114_30185 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515824, DNA
sequence
Length = 686
Score = 78.5 bits (165), Expect = 3e-013
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = +1 / +3
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQV 1515
+GWLHTGDIGY D+G ++F+VDRLKELIKYKGFQV
Sbjct: 315 QGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQV 419
Score = 54.7 bits (113), Expect = 5e-006
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = -2 / -2
Query: 1514 TWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHP 1413
T PLYL+SSLS ST K PSS YP+SPVC+HP
Sbjct: 418 T*KPLYLISSLSLSTTKS*PPSSKYPISPVCNHP 317
>gb|CW252368.1|CW252368 104_715_11224460_148_35093_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11224460, DNA
sequence
Length = 659
Score = 78.5 bits (165), Expect = 3e-013
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = +1 / +3
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQV 1515
+GWLHTGDIGY D+G ++F+VDRLKELIKYKGFQV
Sbjct: 264 QGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQV 368
Score = 54.7 bits (113), Expect = 5e-006
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = -2 / -2
Query: 1514 TWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHP 1413
T PLYL+SSLS ST K PSS YP+SPVC+HP
Sbjct: 367 T*KPLYLISSLSLSTTKS*PPSSKYPISPVCNHP 266
>gb|CN152193.1|CN152193 WOUND1_80_A04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_80_A04_A002 5', mRNA sequence
Length = 492
Score = 78.5 bits (165), Expect = 3e-013
Identities = 36/95 (37%), Positives = 50/95 (52%)
Frame = +1 / +2
Query: 235 LPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAGMRACLGVRSGGTVMLL 414
L L+D + R L+D ATG++LTF A + + GVR G ++
Sbjct: 206 LSLNDLLFRRADACPSALALVDSATGQSLTFAAFRSAVLTTAVALSSRAGVRRGDVILFF 385
Query: 415 LPNSVEFALAFLACSRLGAAATTANPLHTPPEIAK 519
PN + + F A + LGA ATTANPL+TP E+AK
Sbjct: 386 APNCFLYPVCFFAVTALGAVATTANPLYTPREVAK 490
Score = 42.3 bits (86), Expect(2) = 0.002
Identities = 23/58 (39%), Positives = 27/58 (46%)
Frame = -2 / -1
Query: 521 CLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPRQARIPAATRR 348
CLA S GV GLAVVA APR A+ + + G P RTP + A R
Sbjct: 492 CLATSRGV*RGLAVVATAPRAVTAKKQTG*RKQLGAKKRMTSPRRTPAREESATAVVR 319
Score = 24.9 bits (48), Expect(2) = 0.002
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3 / -2
Query: 106 RAGDKRLAASGRVGGAGPGSELCAR 32
R G +R G G GPG CAR
Sbjct: 254 RRGTRRRGGRGGR*GRGPGRTRCAR 180
>gb|CW031048.1|CW031048 104_259_10500576_114_30397 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500576, DNA
sequence
Length = 736
Score = 64.8 bits (135), Expect(3) = 4e-013
Identities = 27/82 (32%), Positives = 44/82 (53%)
Frame = +1 / -1
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GW H+GD+G + + DR K++I G ++ E+E + HP++++A+VV D+
Sbjct: 688 GWFHSGDLGVRHGDGYVEVRDRAKDIIISGGENISSLEVEKAVYLHPAVLEASVVARADE 509
Query: 1594 SCGEIPVAFVVASGGSGITEDE 1659
GE P AFV + DE
Sbjct: 508 QWGESPCAFVTLKDAAVDRSDE 443
Score = 24.9 bits (48), Expect(3) = 4e-013
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / -1
Query: 1729 IPKAPSGKILRKDLRAK 1779
+PK +GKI + +LRAK
Sbjct: 358 LPKTATGKIKKHELRAK 308
Score = 24.4 bits (47), Expect(3) = 4e-013
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1 / -1
Query: 1363 KGYLNNPEATAKTIDS 1410
KGYL NP A A+ ++
Sbjct: 736 KGYLKNPRANAEAFEN 689
>gb|CW304120.1|CW304120 104_788_11465610_148_35698_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11465610, DNA
sequence
Length = 672
Score = 60.2 bits (125), Expect(2) = 4e-013
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +1 / +1
Query: 1408 SEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAH 1551
++GWL TGDI Y D ++IV RLKE+IKYKGFQV L H
Sbjct: 187 NDGWLRTGDIAYFDFDGYLYIVGRLKEVIKYKGFQVCRLPLAGPAKVH 330
Score = 40.9 bits (83), Expect = 0.067
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1 / +2
Query: 1510 QVAPAELEAMLIAHPSIVDAAV 1575
Q+APA+LEA+LI HP IVD AV
Sbjct: 419 QIAPADLEAILIEHPGIVDVAV 484
Score = 40.5 bits (82), Expect(2) = 4e-013
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1 / +3
Query: 1585 KDDSCGEIPVAFVVASGGSGITEDEIKQYVA 1677
+D GEIPVAFVV GSG++ ++ YVA
Sbjct: 579 EDKEAGEIPVAFVVRKSGSGLSCTQVMDYVA 671
Score = 35.0 bits (70), Expect(2) = 0.31
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = -2 / -2
Query: 1514 TWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPS 1410
T NPLYL++S R TM S MSPV S PS
Sbjct: 293 T*NPLYLITSFKRPTMYKYPSKSK*AMSPVRSQPS 189
Score = 24.9 bits (48), Expect(2) = 0.31
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2 / -3
Query: 1643 PEPPDATTNATGISPQESSFI 1581
P P TT ATGISP S +
Sbjct: 637 PLPDFLTTKATGISPASLSSV 575
>gb|CW215263.1|CW215263 104_647_11194448_116_37464_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194448, DNA
sequence
Length = 680
Score = 78.0 bits (164), Expect = 5e-013
Identities = 35/102 (34%), Positives = 56/102 (54%)
Frame = +1 / -3
Query: 1468 IVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGI 1647
I+DR K++I G ++ E+EA L AHP++ +AAVV D+ GE P AFV G +
Sbjct: 663 ILDRSKDIIISGGENISTIEVEAALFAHPAVAEAAVVGRPDEYWGETPCAFVTLKEGKDV 484
Query: 1648 TEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
+E+ + ++ Y + FV +PK +GK+ + LR
Sbjct: 483 GAEEVMAFCRARLPRYMAPRTVVFVAELPKTATGKVQKFALR 358
Score = 42.3 bits (86), Expect = 0.026
Identities = 24/64 (37%), Positives = 31/64 (48%)
Frame = -2 / +2
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+ SS+ P + TNA G+SPQ SS TTAAS G ++P +M S
Sbjct: 467 MTSSAPTSLPSLSVTNAHGVSPQYSSGRPTTAASATAGCANSAASTSMVLMFSPPEMMMS 646
Query: 1484 LSRS 1473
L RS
Sbjct: 647 LDRS 658
>gb|CW236366.1|CW236366 104_692_11215579_116_37501_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11215579, DNA
sequence
Length = 653
Score = 78.0 bits (164), Expect = 5e-013
Identities = 35/102 (34%), Positives = 56/102 (54%)
Frame = +1 / -1
Query: 1468 IVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGI 1647
I+DR K++I G ++ E+EA L AHP++ +AAVV D+ GE P AFV G +
Sbjct: 587 ILDRSKDIIISGGENISTIEVEAALFAHPAVAEAAVVGRPDEYWGETPCAFVTLKEGKDV 408
Query: 1648 TEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
+E+ + ++ Y + FV +PK +GK+ + LR
Sbjct: 407 GAEEVMAFCRARLPRYMAPRTVVFVAELPKTATGKVQKFALR 282
Score = 42.3 bits (86), Expect = 0.026
Identities = 24/64 (37%), Positives = 31/64 (48%)
Frame = -2 / +1
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+ SS+ P + TNA G+SPQ SS TTAAS G ++P +M S
Sbjct: 391 MTSSAPTSLPSLSVTNAHGVSPQYSSGRPTTAASATAGCANSAASTSMVLMFSPPEMMMS 570
Query: 1484 LSRS 1473
L RS
Sbjct: 571 LDRS 582
>gb|CW296766.1|CW296766 104_778_11461690_116_35629_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461690, DNA
sequence
Length = 559
Score = 78.0 bits (164), Expect = 5e-013
Identities = 35/102 (34%), Positives = 56/102 (54%)
Frame = +1 / -3
Query: 1468 IVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGI 1647
I+DR K++I G ++ E+EA L AHP++ +AAVV D+ GE P AFV G +
Sbjct: 539 ILDRSKDIIISGGENISTIEVEAALFAHPAVAEAAVVGRPDEYWGETPCAFVTLKEGKDV 360
Query: 1648 TEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
+E+ + ++ Y + FV +PK +GK+ + LR
Sbjct: 359 GAEEVMAFCRARLPRYMAPRTVVFVAELPKTATGKVQKFALR 234
Score = 42.3 bits (86), Expect = 0.026
Identities = 24/64 (37%), Positives = 31/64 (48%)
Frame = -2 / +1
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+ SS+ P + TNA G+SPQ SS TTAAS G ++P +M S
Sbjct: 343 MTSSAPTSLPSLSVTNAHGVSPQYSSGRPTTAASATAGCANSAASTSMVLMFSPPEMMMS 522
Query: 1484 LSRS 1473
L RS
Sbjct: 523 LDRS 534
>gb|CF432019.1|CF432019 NIT1_16_F12.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_16_F12_A002 5', mRNA sequence
Length = 413
Score = 78.0 bits (164), Expect = 5e-013
Identities = 38/96 (39%), Positives = 49/96 (51%)
Frame = +1 / +3
Query: 235 LPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAGMRACLGVRSGGTVMLL 414
L L+D + R L+D ATG++LTF A + + GVR G V+
Sbjct: 126 LSLNDLLFRRADACPSALALVDSATGQSLTFAAFRSAVLTTAVALSSRAGVRRGDVVLFF 305
Query: 415 LPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQ 522
PN + F A LGA ATTANPL+TP E+AKQ
Sbjct: 306 APNCFLYPGCFFAVPALGAVATTANPLYTPREVAKQ 413
Score = 44.1 bits (90), Expect(2) = 4e-004
Identities = 24/58 (41%), Positives = 27/58 (46%)
Frame = -2 / -2
Query: 521 CLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPRQARIPAATRR 348
CLA S GV GLAVVA APR A+ + G T P RTP + A R
Sbjct: 412 CLATSRGV*RGLAVVATAPRAGTAKKQPG*RKQLGAKKRTTSPRRTPAREESATAVVR 239
Score = 24.9 bits (48), Expect(2) = 4e-004
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3 / -3
Query: 106 RAGDKRLAASGRVGGAGPGSELCAR 32
R G +R G G GPG CAR
Sbjct: 174 RRGTRRRGGRGGR*GRGPGRTRCAR 100
>gb|BZ423489.1|BZ423489 id49h06.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id49h06 5', DNA sequence
Length = 720
Score = 77.6 bits (163), Expect = 6e-013
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = +1 / +1
Query: 166 PTEPQAETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRL 345
P + VFRS LPDI I + L Y +++E DRACLIDG TG + T+ +V+ L
Sbjct: 511 PEAEEKAAVVFRSKLPDIEINNRQSLQTYCFGKMSEVADRACLIDGQTGASYTYAEVESL 690
Query: 346 SRRVAAGMRA 375
SRR A+G+RA
Sbjct: 691 SRRAASGLRA 720
>gb|BG273620.1|BG273620 OV2_27_H08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 483
Score = 77.6 bits (163), Expect = 6e-013
Identities = 34/108 (31%), Positives = 60/108 (55%)
Frame = +1 / -1
Query: 1303 GLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRL 1482
G L + + G + RG +GY +P+ A D+ G+ +GD+ +D I + R
Sbjct: 360 GNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGRE 181
Query: 1483 KELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVV 1626
K+ I G ++A E+E +L+ HP+++ AA+V M+D+ GE A++V
Sbjct: 180 KDQINRGGEKIAAEEIENLLLRHPAVIYAALVSMEDELMGEKSCAYLV 37
>gb|CW296767.1|CW296767 104_778_11461690_148_35633_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461690, DNA
sequence
Length = 693
Score = 67.5 bits (141), Expect(2) = 1e-012
Identities = 30/89 (33%), Positives = 48/89 (53%)
Frame = +1 / +3
Query: 1468 IVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGI 1647
I+DR K++I G ++ E+EA L AHP++ +AAVV D+ GE P AFV G +
Sbjct: 426 ILDRSKDIIISGGENISTIEVEAALFAHPAVAEAAVVGRPDEYWGETPCAFVTLKEGKDV 605
Query: 1648 TEDEIKQYVAKQVVFYKRLHKIFFVEAIP 1734
+E+ + ++ Y + FV +P
Sbjct: 606 GAEEVMAFCRARLPRYMAPRTVVFVAELP 692
Score = 42.3 bits (86), Expect(2) = 9e-005
Identities = 24/64 (37%), Positives = 31/64 (48%)
Frame = -2 / -3
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+ SS+ P + TNA G+SPQ SS TTAAS G ++P +M S
Sbjct: 622 MTSSAPTSLPSLSVTNAHGVSPQYSSGRPTTAASATAGCANSAASTSMVLMFSPPEMMMS 443
Query: 1484 LSRS 1473
L RS
Sbjct: 442 LDRS 431
Score = 28.1 bits (55), Expect(2) = 1e-012
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GE+ RG +M GY + ATA+ +
Sbjct: 288 GEVMFRGNTVMSGYYKDAAATAEAM 362
Score = 26.3 bits (51), Expect(2) = 9e-005
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / -2
Query: 1401 GLRRCLRVVEVPFHQLLAPDANLPGLVAVEG 1309
GLRR RV+ VP H +A + + P V G
Sbjct: 359 GLRRRRRVLVVPAHHRVATEHDFPHGAPVGG 267
>gb|CW029876.1|CW029876 104_257_10499927_114_30401 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499927, DNA
sequence
Length = 830
Score = 63.8 bits (133), Expect(2) = 1e-012
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +1 / +3
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQV 1515
GWL TGD+ Y+D+ +F+VDRLKELIKYKG+QV
Sbjct: 3 GWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQV 104
Score = 35.9 bits (72), Expect = 2.2
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = -2 / -2
Query: 1505 PLYLMSSLSRSTMKISSPSSTYPMSPVCSHP 1413
PLYL++S RST K SS SPV SHP
Sbjct: 94 PLYLINSFRRSTTKRYPSSSM*QRSPVLSHP 2
Score = 35.4 bits (71), Expect(2) = 1e-012
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1 / +1
Query: 1510 QVAPAELEAMLIAHPSIVDAAVV 1578
QV PAELEA+L+ H I D AV+
Sbjct: 640 QVPPAELEALLLTHSEIQDVAVI 708
>gb|AW563237.1|AW563237 LG1_204_D08.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 583
Score = 70.3 bits (147), Expect(2) = 1e-012
Identities = 28/82 (34%), Positives = 47/82 (57%)
Frame = +1 / +3
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GW H+GD+G + + DR+K++I G ++ E+E ++ HP++++A+VV D+
Sbjct: 6 GWYHSGDLGVKHPDGYVEVRDRMKDVIISGGENISSLEVEKVVCTHPAVLEASVVARADE 185
Query: 1594 SCGEIPVAFVVASGGSGITEDE 1659
GE P AFV G+ DE
Sbjct: 186 RWGESPCAFVTLKDGAADGSDE 251
Score = 24.9 bits (48), Expect(2) = 1e-012
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / +3
Query: 1729 IPKAPSGKILRKDLRAK 1779
+PK +GKI + +LRAK
Sbjct: 336 LPKTATGKIKKHELRAK 386
>gb|CW172771.1|CW172771 104_584_11156470_116_36544_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156470, DNA
sequence
Length = 584
Score = 71.2 bits (149), Expect(2) = 2e-012
Identities = 31/80 (38%), Positives = 48/80 (60%)
Frame = +1 / -2
Query: 1402 IDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQ 1581
I +GW +TGD+G + + I DR K++I G ++ E+E++L +HP++ +AAVV
Sbjct: 583 IREDGWFYTGDVGVMHPDGYMEIRDRSKDVIISGGENISSVEVESVLYSHPAVNEAAVVA 404
Query: 1582 MKDDSCGEIPVAFVVASGGS 1641
DD GE P AFV G+
Sbjct: 403 RPDDFWGETPCAFVGLKEGA 344
Score = 58.8 bits (122), Expect = 3e-007
Identities = 29/76 (38%), Positives = 40/76 (52%)
Frame = -2 / +3
Query: 1637 PPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKIS 1458
P + TNA G+SPQ+SS TTAAS GW ++P +++SL RS + +
Sbjct: 348 PSLSPTNAHGVSPQKSSGRATTAASFTAGWL*STDSTSTLLMFSPPLMITSLDRSRISMY 527
Query: 1457 SPSSTYPMSPVCSHPS 1410
P SPV +HPS
Sbjct: 528 PSGCITPTSPV*NHPS 575
Score = 23.5 bits (45), Expect(2) = 2e-012
Identities = 10/48 (20%), Positives = 23/48 (47%)
Frame = +1 / -2
Query: 1630 SGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
+ +T ++ + +++ Y + F + +PK +GKI + LR
Sbjct: 346 ASAGAVTAADVIAWCRQRMPHYMVPRTVVFRDELPKTSTGKIQKYVLR 203
>gb|CN127763.1|CN127763 RHOH1_24_H12.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_24_H12_A002 5', mRNA sequence
Length = 698
Score = 68.0 bits (142), Expect(2) = 4e-012
Identities = 30/59 (50%), Positives = 37/59 (62%)
Frame = +1 / +3
Query: 379 LGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
L +R G ++L PNS+ F +A LA LGA TTANPL+TP EIAKQ A + V T
Sbjct: 387 LSLRKGQVALILSPNSIHFPVAALAAMSLGAVLTTANPLNTPAEIAKQVADARPVVAFT 563
Score = 51.5 bits (106), Expect = 5e-005
Identities = 27/57 (47%), Positives = 30/57 (52%)
Frame = -2 / -2
Query: 554 VMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRT 384
V T +A CLAIS GV SGLAVV APR A A+ EFG PLR+
Sbjct: 562 VKATTGRASATCLAISAGVLSGLAVVRTAPRDMAASAATGKWMEFGERMSATWPLRS 392
Score = 25.8 bits (50), Expect(2) = 4e-012
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1 / +3
Query: 292 LIDGATGETLTFGDVDRLSRRVAAGMRA 375
LID ATG +TF D+ R A + A
Sbjct: 297 LIDAATGRRVTFRDLWRAVEGAATALAA 380
>gb|CW461850.1|CW461850 fsbb001f209l10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f209l10, DNA
sequence
Length = 482
Score = 65.7 bits (137), Expect(2) = 2e-011
Identities = 28/50 (56%), Positives = 34/50 (68%)
Frame = +1 / +3
Query: 379 LGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAA 528
L +R G ++L PNS+ F +A LA LGA TTANPL+TP EIAKQ A
Sbjct: 309 LSLRKGQVALILSPNSIHFPVAALAAMSLGAVLTTANPLNTPAEIAKQVA 458
Score = 49.2 bits (101), Expect = 2e-004
Identities = 25/49 (51%), Positives = 28/49 (57%)
Frame = -2 / -2
Query: 530 AAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRT 384
+A CLAIS GV SGLAVV APR A A+ EFG PLR+
Sbjct: 460 SATCLAISAGVLSGLAVVRTAPRDMAASAATGKWMEFGERMSATWPLRS 314
Score = 25.8 bits (50), Expect(2) = 2e-011
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1 / +3
Query: 292 LIDGATGETLTFGDVDRLSRRVAAGMRA 375
LID ATG +TF D+ R A + A
Sbjct: 219 LIDAATGRRVTFRDLWRAVEGAATALAA 302
>gb|CW302340.1|CW302340 104_786_11464668_148_35667_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464668, DNA
sequence
Length = 595
Score = 72.5 bits (152), Expect = 2e-011
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = +1 / -1
Query: 1582 MKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILR 1761
+ D+ GE+PV+ VV GS +E +I YVA +V YK+L ++ FV+ IPK+ SGKILR
Sbjct: 478 LPDEEAGEVPVSCVVRRRGSSESEADIMAYVAGRVASYKKLRQLQFVDVIPKSVSGKILR 299
Query: 1762 KDLR 1773
+ LR
Sbjct: 298 RQLR 287
Score = 53.3 bits (110), Expect = 1e-005
Identities = 27/61 (44%), Positives = 34/61 (55%)
Frame = -1 / +2
Query: 1782 QLCSQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDL 1603
+L ++ P +LAG RLGD +HE L + LV H HV D+ L A H RHRDL
Sbjct: 278 ELVPKLPPQDLAGHRLGDDVHELQLPELLVRRHATGHVRHDVCLALRRATPPHHARHRDL 457
Query: 1602 A 1600
A
Sbjct: 458 A 460
Score = 51.9 bits (107), Expect = 3e-005
Identities = 27/57 (47%), Positives = 34/57 (59%)
Frame = -2 / +3
Query: 1757 KILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQESS 1587
+ILPD LGM ST S L + T ATY ++S+S+ EP TT+ TG SP SS
Sbjct: 303 RILPDTDLGMTSTNCSCRSFLYDATRPATYAMMSASLSDEPRRRTTHDTGTSPASSS 473
Score = 39.6 bits (80), Expect = 0.17
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3 / -3
Query: 1668 VRGETGGVLQEAAQDLLRGGHPQGAIRQD 1754
VRG + GV+QEA +RG HPQ +RQD
Sbjct: 392 VRGRSRGVVQEAPAAAVRGRHPQVGVRQD 306
>gb|CF430358.1|CF430358 PH1_27_C01.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_C01_A002 5', mRNA sequence
Length = 773
Score = 46.9 bits (96), Expect(3) = 2e-011
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +1 / -2
Query: 1585 KDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQV 1686
+D+ GEIPVAFVV GSG++ ++ YVAKQV
Sbjct: 223 EDEVLGEIPVAFVVRKSGSGLSCTQVMDYVAKQV 122
Score = 40.9 bits (83), Expect(3) = 2e-011
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1 / -3
Query: 1510 QVAPAELEAMLIAHPSIVDAAV 1575
Q+APA+LEA+LI HP IVD AV
Sbjct: 390 QIAPADLEAILIQHPGIVDVAV 325
Score = 26.7 bits (52), Expect(3) = 2e-011
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1 / -2
Query: 1408 SEGWLHTGDIGY 1443
++GWL TGDI Y
Sbjct: 598 NDGWLRTGDIAY 563
>gb|CW259290.1|CW259290 104_725_11228343_116_35184_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11228343, DNA
sequence
Length = 557
Score = 68.9 bits (144), Expect(2) = 2e-011
Identities = 30/75 (40%), Positives = 44/75 (58%)
Frame = +1 / -1
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGF 1509
GEI +RG +M GYLN+ AT I GW +TGD+G + + I DR K++I G
Sbjct: 227 GEIVLRGGCVMLGYLNDDTATRAAIRDNGWFYTGDVGVMHPDGYMEIRDRSKDVIISGGE 48
Query: 1510 QVAPAELEAMLIAHP 1554
++ E+E++L HP
Sbjct: 47 NISSVEVESVLYNHP 3
Score = 40.5 bits (82), Expect = 0.092
Identities = 22/75 (29%), Positives = 32/75 (42%)
Frame = -2 / +1
Query: 1553 GWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLL 1374
GW ++P +++SL RS + + P SPV +HP + VA L
Sbjct: 4 GWL*STDSTSTLLMFSPPLMITSLDRSRISMYPSGCITPTSPV*NHPLSRIAALVAVSSL 183
Query: 1373 RYPFINCLPLMQISP 1329
R P + P ISP
Sbjct: 184 R*PSMTHPPRSTISP 228
Score = 22.1 bits (42), Expect(2) = 2e-011
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / -1
Query: 1273 AELKIIDPETGLSLHRN 1323
AE+ I+D ETG S+ R+
Sbjct: 290 AEVDIVDGETGHSVPRD 240
>gb|CW311231.1|CW311231 104_800_11470125_116_35753_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470125, DNA
sequence
Length = 643
Score = 51.9 bits (107), Expect(2) = 6e-011
Identities = 19/36 (52%), Positives = 30/36 (83%)
Frame = +1 / -2
Query: 1681 QVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLAS 1788
QV +YK+L ++ FV+++PK+ SGKILR++L AK+ S
Sbjct: 366 QVAYYKKLRRVTFVDSVPKSASGKILRRELIAKVRS 259
Score = 41.4 bits (84), Expect(2) = 6e-011
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +1 / -2
Query: 1588 DDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRL 1704
D GE+P+A+VV+S S +TE ++++++ KQV + L
Sbjct: 633 DAEAGEVPIAYVVSSPVSSLTEVDVQKFIEKQVSLCRNL 517
Score = 35.4 bits (71), Expect = 3.0
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -2 / +2
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTC 1680
D + A+ S LKI P+ G STK L + L* TC
Sbjct: 260 DLTLAISSLLKIFPEADFGTLSTKVTLLNFL*YATC 367
>gb|BE355205.1|BE355205 DG1_10_G04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 542
Score = 64.8 bits (135), Expect(2) = 6e-011
Identities = 27/82 (32%), Positives = 44/82 (53%)
Frame = +1 / +1
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GW H+GD+G + + DR K++I G ++ E+E + HP++++A+VV D+
Sbjct: 28 GWFHSGDLGVRHGDGYVEVRDRAKDIIISGGENISSLEVEKAVYLHPAVLEASVVARADE 207
Query: 1594 SCGEIPVAFVVASGGSGITEDE 1659
GE P AFV + DE
Sbjct: 208 QWGESPCAFVTLKDAAVDRSDE 273
Score = 24.9 bits (48), Expect(2) = 6e-011
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 1729 IPKAPSGKILRKDLRAK 1779
+PK +GKI + +LRAK
Sbjct: 358 LPKTATGKIKKHELRAK 408
>gb|CB926952.1|CB926952 ABA1_11_E07.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_11_E07_A012 5', mRNA sequence
Length = 530
Score = 70.3 bits (147), Expect = 1e-010
Identities = 33/90 (36%), Positives = 46/90 (51%)
Frame = +1 / +3
Query: 235 LPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAGMRACLGVRSGGTVMLL 414
L L+D + R L+D ATG++L+F A + + GVR G V+
Sbjct: 258 LSLNDLLFRRADACPSALALVDSATGQSLSFAAFRSAVLTTAVALSSRAGVRRGDVVLFF 437
Query: 415 LPNSVEFALAFLACSRLGAAATTANPLHTP 504
PN + + F A + LGA ATTANPL+TP
Sbjct: 438 APNCFLYPVCFFAVTALGAVATTANPLYTP 527
Score = 36.8 bits (74), Expect(2) = 0.099
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = -2 / -2
Query: 503 GVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPRQARIPAATRR 348
GV GLAVVA APR A+ + + G T P RTP + A R
Sbjct: 526 GV*RGLAVVATAPRAVTAKKQTG*RKQLGAKKRTTSPRRTPAREESATAVVR 371
Score = 24.4 bits (47), Expect(2) = 0.099
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3 / -3
Query: 106 RAGDKRLAASGRVGGAGPGSELCAR 32
R G +R G G GPG CAR
Sbjct: 306 RRGTRRRGERGGR*GRGPGRTRCAR 232
>gb|BE361897.1|BE361897 DG1_83_C04.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 564
Score = 66.6 bits (139), Expect(2) = 1e-010
Identities = 26/56 (46%), Positives = 34/56 (60%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIK 1497
GEIC+RG + GY + T + ID +GWLHTGDIG G + I+DR K + K
Sbjct: 198 GEICVRGPIVFHGYYKDEVQTKEVIDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 365
Score = 41.8 bits (85), Expect = 0.036
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = -2 / -3
Query: 1454 PSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
P S PMSPVC+ PS SM V + L P+ PL QISP
Sbjct: 322 PGSHRPMSPVCNQPSSSMTSFV*TSSL**PWNTIGPLTQISP 197
Score = 22.1 bits (42), Expect(2) = 1e-010
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1 / +3
Query: 1165 QGYGMTEAGPVLS 1203
+GYGMTE ++S
Sbjct: 39 EGYGMTETSCIIS 77
>gb|CF760595.1|CF760595 DSAF1_63_D01.b1_A011 Drought-stressed after flowering Sorghum bicolor
cDNA clone DSAF1_63_D01_A011 5', mRNA sequence
Length = 455
Score = 66.6 bits (139), Expect(2) = 1e-010
Identities = 26/56 (46%), Positives = 34/56 (60%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIK 1497
GEIC+RG + GY + T + ID +GWLHTGDIG G + I+DR K + K
Sbjct: 180 GEICVRGPIVFHGYYKDEVQTKEVIDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 347
Score = 41.8 bits (85), Expect = 0.036
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = -2 / -2
Query: 1454 PSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
P S PMSPVC+ PS SM V + L P+ PL QISP
Sbjct: 304 PGSHRPMSPVCNQPSSSMTSFV*TSSL**PWNTIGPLTQISP 179
Score = 22.1 bits (42), Expect(2) = 1e-010
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1 / +3
Query: 1165 QGYGMTEAGPVLS 1203
+GYGMTE ++S
Sbjct: 21 EGYGMTETSCIIS 59
>gb|CX606328.1|CX606328 ANR1_2_A04.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_2_A04_A002 5', mRNA sequence
Length = 870
Score = 52.8 bits (109), Expect(3) = 1e-010
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +1 / +2
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQLVDGDNPN 834
LPYSSGTTGLPKGV L+H ++++ Q+ D D P+
Sbjct: 557 LPYSSGTTGLPKGVCLTHFNIISNFLQMADIDPPD 661
Score = 37.7 bits (76), Expect(3) = 1e-010
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +1 / +1
Query: 202 STLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRR 354
S PD+A+ L ++L C IDG +GE TFG V L RR
Sbjct: 22 SPWPDVALEYRSDLTQWLLTNSEGLPHNPCFIDGHSGELYTFGQVASLIRR 174
Score = 21.7 bits (41), Expect(3) = 1e-010
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1 / +2
Query: 850 DDVVLCVLPMFHVYSL 897
D V L +LP FH Y +
Sbjct: 671 DKVQLGLLPFFHSYGM 718
>gb|CL192003.1|CL192003 104_414_10939937_114_32245_071 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10939937, DNA
sequence
Length = 669
Score = 69.3 bits (145), Expect = 2e-010
Identities = 29/65 (44%), Positives = 45/65 (69%)
Frame = +1 / -3
Query: 1579 QMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKIL 1758
++ D+ GE+P + VV G+ +E ++ YVA++V YK+L + FV+AIPK+ SGKIL
Sbjct: 589 RLPDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKIL 410
Query: 1759 RKDLR 1773
R+ LR
Sbjct: 409 RRQLR 395
Score = 51.5 bits (106), Expect = 5e-005
Identities = 27/63 (42%), Positives = 36/63 (57%)
Frame = -2 / +3
Query: 1775 ALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQ 1596
+L +ILPD LGMAST + S L + T ATY ++S+S+ P TT+ G SP
Sbjct: 393 SLSCLRRILPDTDLGMASTNRSSRSFLYDATRSATYAIMSASLSGAPRRRTTHDAGTSPA 572
Query: 1595 ESS 1587
SS
Sbjct: 573 SSS 581
Score = 50.1 bits (103), Expect = 1e-004
Identities = 25/61 (40%), Positives = 33/61 (54%)
Frame = -1 / +2
Query: 1782 QLCSQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDL 1603
++ ++ P +LAG RLGDG+HE + LV H RHV + L A H R RDL
Sbjct: 386 EVVPELPPQDLAGHRLGDGVHEPQQPELLVRRHALRHVRHHVRLALRRATTPHHARRRDL 565
Query: 1602 A 1600
A
Sbjct: 566 A 568
Score = 40.5 bits (82), Expect = 0.092
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3 / -2
Query: 1668 VRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESK 1778
VRG GV+QEA +RG HPQ +RQD E ++ +
Sbjct: 500 VRGGARGVVQEAPAAAVRGRHPQVGVRQDPAEAAQGR 390
Score = 35.0 bits (70), Expect = 4.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3 / +1
Query: 1762 SLKSCRMAPWGWPPRRRSCAASC 1694
S SCR WGW PR + ASC
Sbjct: 406 SAGSCRTPTWGWRPRTAAAGASC 474
>gb|CW222300.1|CW222300 104_657_11202303_116_37173_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11202303, DNA
sequence
Length = 687
Score = 57.4 bits (119), Expect(2) = 2e-010
Identities = 20/34 (58%), Positives = 30/34 (88%)
Frame = +1 / -2
Query: 1681 QVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKL 1782
QV++YK++ ++ F++ IPKAPSGKILRK+LR +L
Sbjct: 482 QVIYYKKVREVIFIDKIPKAPSGKILRKELRKQL 381
Score = 34.1 bits (68), Expect(2) = 2e-010
Identities = 11/19 (57%), Positives = 18/19 (94%)
Frame = +1 / -2
Query: 1636 GSGITEDEIKQYVAKQVVF 1692
GS ++ED++KQ+VAK+V+F
Sbjct: 668 GSELSEDDVKQFVAKEVIF 612
>gb|CW791231.1|CW791231 SP__Ba0077I13.r SP__Ba Sorghum propinquum genomic clone SP__Ba0077I13
3', DNA sequence
Length = 365
Score = 68.9 bits (144), Expect = 3e-010
Identities = 28/74 (37%), Positives = 44/74 (59%)
Frame = +1 / -1
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GWLHTGD+ + I + DR K++I G ++ E+E+++ +HP++++AAVV D
Sbjct: 230 GWLHTGDLAVRNPDGYIELKDRAKDIIISGGENISSIEVESVIFSHPAVLEAAVVARPHD 51
Query: 1594 SCGEIPVAFVVASG 1635
GE P AF G
Sbjct: 50 HWGETPCAFCQGQG 9
Score = 54.7 bits (113), Expect = 5e-006
Identities = 27/69 (39%), Positives = 34/69 (49%)
Frame = -2 / +1
Query: 1619 NATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTY 1440
NA G+SPQ S TTAAS+ GW ++P +M SL+RS +
Sbjct: 25 NAHGVSPQWSCGRATTAASSTAGWLKITDSTSMELMFSPPEMMMSLARSLSSMYPSGFRT 204
Query: 1439 PMSPVCSHP 1413
SPVCSHP
Sbjct: 205 ARSPVCSHP 231
>gb|BE600316.1|BE600316 PI1_94_H11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 193
Score = 68.0 bits (142), Expect = 5e-010
Identities = 25/56 (44%), Positives = 42/56 (75%)
Frame = +1 / +2
Query: 1600 GEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKD 1767
GEIPVAFV + GS ++ED++KQ+VAK+V++YK++ ++ P+ P G+ +RK+
Sbjct: 17 GEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVILH*QDPQGPIGQDMRKE 184
Score = 38.2 bits (77), Expect = 0.45
Identities = 23/54 (42%), Positives = 25/54 (46%)
Frame = -2 / -2
Query: 1748 PDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQESS 1587
P G G K + L* T AT CL SSS+ P T ATGISP S
Sbjct: 165 PMGPWGSCQCKITSRTFL*YITSLATNCLTSSSLSSLPLALATKATGISPISGS 4
>gb|BG558804.1|BG558804 RHIZ2_56_G08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 375
Score = 67.5 bits (141), Expect = 7e-010
Identities = 30/59 (50%), Positives = 37/59 (62%)
Frame = +1 / +3
Query: 379 LGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
L +R G ++L PNS+ F +A LA LGA TTANPL+TP EIAKQ A + V T
Sbjct: 45 LSLRKGQVALILSPNSIHFPVAALATMSLGAVLTTANPLNTPAEIAKQVADARPVVAFT 221
Score = 51.0 bits (105), Expect = 6e-005
Identities = 27/57 (47%), Positives = 30/57 (52%)
Frame = -2 / -3
Query: 554 VMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRT 384
V T +A CLAIS GV SGLAVV APR A A+ EFG PLR+
Sbjct: 220 VKATTGRASATCLAISAGVLSGLAVVRTAPRDMVASAATGKWMEFGERMSATWPLRS 50
>gb|BZ343984.1|BZ343984 hp58d09.b2 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hp58d09 5', DNA sequence
Length = 474
Score = 66.6 bits (139), Expect = 1e-009
Identities = 23/30 (76%), Positives = 28/30 (93%)
Frame = +1 / +1
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKY 1500
+GWLHTGDIGY D+G ++F+VDRLKELIKY
Sbjct: 385 QGWLHTGDIGYFDEGGQLFVVDRLKELIKY 474
Score = 49.2 bits (101), Expect = 2e-004
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -2 / -2
Query: 1499 YLMSSLSRSTMKISSPSSTYPMSPVCSHP 1413
YL+SSLS ST K PSS YP+SPVC+HP
Sbjct: 473 YLISSLSLSTTKS*PPSSKYPISPVCNHP 387
>gb|CW372862.1|CW372862 fsbb001f048p10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f048p10, DNA
sequence
Length = 344
Score = 66.6 bits (139), Expect = 1e-009
Identities = 31/98 (31%), Positives = 52/98 (53%)
Frame = +1 / -2
Query: 1426 TGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGE 1605
TGD+ I + DR K++I G ++ +E+++ +HP++++AAVV DD GE
Sbjct: 343 TGDLAVRHPDGYIELKDRAKDIIISGGENISSIGVESVIFSHPAVLEAAVVARPDDHWGE 164
Query: 1606 IPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFF 1719
P AFV G+ TE EI + +++ Y + F
Sbjct: 163 TPCAFVKLKDGASATEAEIISFCRERLPHYMAPKTVVF 50
Score = 52.4 bits (108), Expect = 2e-005
Identities = 30/80 (37%), Positives = 39/80 (48%)
Frame = -2 / +3
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+IS+SV P + TNA G+SPQ SS TTAAS GW ++P +M S
Sbjct: 105 MISASVALAPSLSLTNAHGVSPQWSSGRATTAASRTAGWLKITDSTPMELMFSPPEMMMS 284
Query: 1484 LSRSTMKISSPSSTYPMSPV 1425
L+RS + SPV
Sbjct: 285 LARSLSSMYPSGCRTARSPV 344
>gb|BE362340.1|BE362340 DG1_86_A10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 606
Score = 66.6 bits (139), Expect = 1e-009
Identities = 26/56 (46%), Positives = 34/56 (60%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIK 1497
GEIC+RG + GY + T + ID +GWLHTGDIG G + I+DR K + K
Sbjct: 132 GEICVRGPIVFHGYYKDEVQTKEVIDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 299
Score = 41.8 bits (85), Expect = 0.036
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = -2 / -3
Query: 1454 PSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
P S PMSPVC+ PS SM V + L P+ PL QISP
Sbjct: 256 PGSHRPMSPVCNQPSSSMTSFV*TSSL**PWNTIGPLTQISP 131
>gb|CX621405.1|CX621405 GABR1_58_A01.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_58_A01_A002 3', mRNA sequence
Length = 752
Score = 66.1 bits (138), Expect = 2e-009
Identities = 31/91 (34%), Positives = 44/91 (48%)
Frame = +1 / +2
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLI 1545
GY N + + GWL TGD G++D ++++ R K IK G V P E+E +L
Sbjct: 5 GYWANNKVDSSDCVRNGWLDTGDTGWIDKAGNLWLMGRQKGRIKTGGENVYPEEVELVLS 184
Query: 1546 AHPSIVDAAVVQMKDDSCGEIPVAFVVASGG 1638
HP + VV + D GE +A V G
Sbjct: 185 QHPGVARVVVVGIPDSRLGEKVIACVSIRDG 277
>gb|CF072555.1|CF072555 FE1_3_D02.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA clone
FE1_3_D02_A002 5', mRNA sequence
Length = 479
Score = 65.7 bits (137), Expect = 2e-009
Identities = 29/86 (33%), Positives = 49/86 (56%)
Frame = +1 / -2
Query: 1462 IFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGS 1641
I + DR K++I G ++ E+E+++ +HP++++AAVV DD GE P AFV G+
Sbjct: 454 IELKDRAKDIIISGGENISSIEVESVIFSHPAVLEAAVVARPDDHWGETPCAFVKLKDGA 275
Query: 1642 GITEDEIKQYVAKQVVFYKRLHKIFF 1719
TE EI + +++ Y + F
Sbjct: 274 SATEAEIISFCRERLPHYMAPKTVVF 197
Score = 51.5 bits (106), Expect = 5e-005
Identities = 27/64 (42%), Positives = 35/64 (54%)
Frame = -2 / +3
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+IS+SV P + TNA G+SPQ SS TTAAS GW ++P +M S
Sbjct: 252 MISASVALAPSLSLTNAHGVSPQWSSGRATTAASRTAGWLKITDSTSMELMFSPPEMMMS 431
Query: 1484 LSRS 1473
L+RS
Sbjct: 432 LARS 443
>gb|CW482066.1|CW482066 fsbb001f241p11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f241p11, DNA
sequence
Length = 661
Score = 58.8 bits (122), Expect(2) = 3e-009
Identities = 25/77 (32%), Positives = 43/77 (55%)
Frame = +1 / -2
Query: 1429 GDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEI 1608
GD+G + + DR+K++I G ++ E+E ++ HP++++A+VV D+ GE
Sbjct: 660 GDLGVKHPDGYVEVRDRMKDVIISGGENISSLEVEKVVCTHPAVLEASVVARADERWGES 481
Query: 1609 PVAFVVASGGSGITEDE 1659
P AFV G+ DE
Sbjct: 480 PCAFVTLKDGAADGSDE 430
Score = 24.9 bits (48), Expect(2) = 3e-009
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / -2
Query: 1729 IPKAPSGKILRKDLRAK 1779
+PK +GKI + +LRAK
Sbjct: 345 LPKTATGKIKKHELRAK 295
>gb|CW194264.1|CW194264 104_617_11180005_116_36787_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180005, DNA
sequence
Length = 688
Score = 41.4 bits (84), Expect(2) = 1e-008
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +1 / +1
Query: 1507 FQVAPAELEAMLIAHPSIVDAAVV 1578
+Q+APAELE +L++HP I+DA V+
Sbjct: 298 WQIAPAELEGLLLSHPEILDAVVI 369
Score = 40.5 bits (82), Expect(2) = 1e-008
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +1 / +3
Query: 1588 DDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRL 1704
D GE+P+A+VV S S +TE ++++++ KQV + L
Sbjct: 486 DAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVSLCRNL 602
>gb|CW252367.1|CW252367 104_715_11224460_116_35097_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11224460, DNA
sequence
Length = 612
Score = 41.4 bits (84), Expect(2) = 1e-008
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +1 / -3
Query: 1507 FQVAPAELEAMLIAHPSIVDAAVV 1578
+Q+APAELE +L++HP I+DA V+
Sbjct: 481 WQIAPAELEGLLLSHPEILDAVVI 410
Score = 40.5 bits (82), Expect(2) = 1e-008
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +1 / -2
Query: 1588 DDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRL 1704
D GE+P+A+VV S S +TE ++++++ KQV + L
Sbjct: 293 DAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVSLCRNL 177
>gb|CD423783.1|CD423783 SA1_1_E11.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_1_E11_A002 3', mRNA sequence
Length = 735
Score = 52.8 bits (109), Expect(2) = 3e-008
Identities = 25/71 (35%), Positives = 41/71 (57%)
Frame = +1 / +1
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKD 1590
+G+ TGD D +I R+ +++ G +++ AE+EA L+ H S+ DAAVV + D
Sbjct: 40 KGYYFTGDGAARDHEGFYWIRGRVDDVVNVSGHRLSTAEIEAALLEHHSVADAAVVGIAD 219
Query: 1591 DSCGEIPVAFV 1623
+ G+ AFV
Sbjct: 220 ELTGQAVNAFV 252
Score = 27.6 bits (54), Expect(2) = 3e-008
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1 / +1
Query: 1657 EIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLA 1785
E+ V K + + ++ V +PK SGKI+R+ LR +A
Sbjct: 295 ELVVQVRKSIGPFAAPKAVYVVPDMPKTRSGKIMRRVLRKIVA 423
>gb|CL158207.1|CL158207 104_346_10803385_116_31376_361 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10803385, DNA
sequence
Length = 691
Score = 40.0 bits (81), Expect(2) = 4e-008
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1 / -1
Query: 379 LGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVITE 558
+G+R G V++ LPN + + L GA + NP EI KQ S A +V+ +
Sbjct: 271 VGIRKGHVVVVALPNLAVYPVVSLGIMSAGAVFSGVNPRAVAGEIKKQVEDSEARLVVAD 92
Score = 40.0 bits (81), Expect(2) = 4e-008
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1 / -1
Query: 172 EPQAETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATG 312
E Q + +FRS P +A+PD + + ++VL D+ L++ A G
Sbjct: 478 EEQEQEHIFRSRFPPVAVPDDVTVPEFVLAGAEAYADKTALVEAAPG 338
>gb|BZ422124.1|BZ422124 id49h06.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id49h06 5', DNA sequence
Length = 575
Score = 61.6 bits (128), Expect = 4e-008
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1 / -2
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQLV 816
LPYSSGTTGLPKGVML+HR L+TSVAQ V
Sbjct: 364 LPYSSGTTGLPKGVMLTHRSLITSVAQQV 278
Score = 40.5 bits (82), Expect = 0.092
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -2 / +3
Query: 815 TSCATLVTSPRCDSITPLGSPVVPDEYG 732
T CATLV R S+TPLG PVVP+E G
Sbjct: 279 TCCATLVMRLRWVSMTPLGRPVVPEE*G 362
>gb|CW049940.1|CW049940 104_289_10514355_115_30204 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10514355, DNA
sequence
Length = 317
Score = 61.6 bits (128), Expect = 4e-008
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1 / -2
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQLV 816
LPYSSGTTGLPKGVML+HR L+TSVAQ V
Sbjct: 289 LPYSSGTTGLPKGVMLTHRSLITSVAQQV 203
Score = 40.5 bits (82), Expect = 0.092
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -2 / +3
Query: 815 TSCATLVTSPRCDSITPLGSPVVPDEYG 732
T CATLV R S+TPLG PVVP+E G
Sbjct: 204 TCCATLVMRLRWVSMTPLGRPVVPEE*G 287
>gb|CW187934.1|CW187934 104_607_11172750_148_36727_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11172750, DNA
sequence
Length = 550
Score = 61.6 bits (128), Expect = 4e-008
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1 / -1
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQLV 816
LPYSSGTTGLPKGVML+HR L+TSVAQ V
Sbjct: 520 LPYSSGTTGLPKGVMLTHRSLITSVAQQV 434
Score = 40.5 bits (82), Expect = 0.092
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -2 / +3
Query: 815 TSCATLVTSPRCDSITPLGSPVVPDEYG 732
T CATLV R S+TPLG PVVP+E G
Sbjct: 435 TCCATLVMRLRWVSMTPLGRPVVPEE*G 518
>gb|CW235267.1|CW235267 104_690_11214890_116_37410_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214890, DNA
sequence
Length = 604
Score = 61.6 bits (128), Expect = 4e-008
Identities = 27/79 (34%), Positives = 43/79 (54%)
Frame = +1 / +2
Query: 1483 KELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEI 1662
K++I G ++ E+E++L HP+++DAAVV DD GE P AFV G+ T D+I
Sbjct: 2 KDIIISGGENISSIEVESVLFGHPAVLDAAVVARPDDHWGETPCAFVTLKNGATATADDI 181
Query: 1663 KQYVAKQVVFYKRLHKIFF 1719
+ ++ Y + F
Sbjct: 182 IGFCRARLPHYMAPRTVVF 238
Score = 42.3 bits (86), Expect = 0.026
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = -2 / -2
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
++SS+V P + TNA G+SPQ SS + TTAAS+ G ++P +M S
Sbjct: 183 MMSSAVAVAPFLSVTNAHGVSPQWSSGLATTAASSTAGCPNSTDSTSMELMFSPPEMMMS 4
Query: 1484 L 1482
L
Sbjct: 3 L 1
>gb|CW482181.1|CW482181 fsbb001f242c09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f242c09, DNA
sequence
Length = 549
Score = 61.6 bits (128), Expect = 4e-008
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1 / -1
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQLV 816
LPYSSGTTGLPKGVML+HR L+TSVAQ V
Sbjct: 528 LPYSSGTTGLPKGVMLTHRSLITSVAQQV 442
Score = 40.5 bits (82), Expect = 0.092
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -2 / +2
Query: 815 TSCATLVTSPRCDSITPLGSPVVPDEYG 732
T CATLV R S+TPLG PVVP+E G
Sbjct: 443 TCCATLVMRLRWVSMTPLGRPVVPEE*G 526
>gb|CW065572.1|CW065572 104_312_10523225_114_30128 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10523225, DNA
sequence
Length = 544
Score = 53.3 bits (110), Expect(2) = 5e-008
Identities = 20/54 (37%), Positives = 35/54 (64%)
Frame = +1 / +3
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAV 1575
GWLHTGD+ I + DR K++I G ++ E+E+++ +HP++++AAV
Sbjct: 381 GWLHTGDLAVRHPDGYIELKDRAKDIIISGGENISSIEVESVIFSHPAVLEAAV 542
Score = 43.2 bits (88), Expect = 0.014
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = -2 / -1
Query: 1577 TTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHP 1413
TTAAS GW ++P +M SL+RS + SPVCSHP
Sbjct: 544 TTAASRTAGWLKITDSTSMELMFSPPEMMMSLARSLSSMYPSGCRTARSPVCSHP 380
Score = 26.3 bits (51), Expect(2) = 5e-008
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GE+ RG +M GY + +AT +++
Sbjct: 300 GEVMFRGNTVMSGYYKDLKATKESM 374
>gb|CW121115.1|CW121115 104_498_11109715_116_34649_066 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11109715, DNA
sequence
Length = 231
Score = 61.1 bits (127), Expect = 6e-008
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1 / +1
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQLV 816
LPYSSGTTG+PKGVML+HR LVTSVAQ V
Sbjct: 55 LPYSSGTTGMPKGVMLTHRSLVTSVAQQV 141
Score = 47.8 bits (98), Expect = 6e-004
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -2 / -2
Query: 815 TSCATLVTSPRCDSITPLGSPVVPDEYG 732
T CATLVT RC S+TPLG PVVP+E G
Sbjct: 140 TCCATLVTRLRCVSMTPLGIPVVPEE*G 57
>gb|CD220328.1|CD220328 CCC1_66_E03.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_66_E03_A007 5', mRNA sequence
Length = 432
Score = 61.1 bits (127), Expect = 6e-008
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = +1 / +3
Query: 1336 ICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIK 1497
IC+RG + GY + T + ID +GWLHTGDIG G + I+DR K + K
Sbjct: 36 ICVRGPIIFCGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 197
Score = 34.5 bits (69), Expect = 5.7
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = -2 / -3
Query: 1454 PSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQI 1335
P S PMSPVC+ PS SM V + L P PL QI
Sbjct: 154 PGSHKPMSPVCNQPSSSMTSLVWTSSL**PQNIIGPLTQI 35
>gb|CN134995.1|CN134995 OX1_29_H04.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_29_H04_A002 5', mRNA sequence
Length = 704
Score = 60.6 bits (126), Expect(2) = 8e-008
Identities = 28/94 (29%), Positives = 46/94 (48%)
Frame = +1 / +1
Query: 280 DRACLIDGATGETLTFGDVDRLSRRVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACS 459
DR L+D ATG +++ R +A G+ + LG+R G +++ P+ ++ + A
Sbjct: 238 DRPALVDAATGIAVSYPSFLAAVRSLAGGLWSVLGLRPGDVALVVSPSRIDVPVIDFALM 417
Query: 460 RLGAAATTANPLHTPPEIAKQAAASGATVVITEP 561
+GA + ANP T E A A S V + P
Sbjct: 418 SIGAVVSPANPASTADEYAHMVALSRPVVALAAP 519
Score = 22.1 bits (42), Expect(2) = 8e-008
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1 / +1
Query: 736 YSSGTTGLPKGVMLS 780
YSSGTTG K +S
Sbjct: 658 YSSGTTGRVKAAAVS 702
>gb|CW362993.1|CW362993 fsbb001f034f02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f034f02, DNA
sequence
Length = 381
Score = 60.6 bits (126), Expect = 8e-008
Identities = 25/77 (32%), Positives = 39/77 (50%)
Frame = +1 / +1
Query: 856 VVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAVE 1035
V L ++P FH+Y + I +R +V+M RFD + H + P+V P+ +
Sbjct: 28 VTLGLMPFFHIYGITGICCSTLRHKGTVVVMDRFDLRTFLGALVTHRVRFAPIVPPVMLA 207
Query: 1036 MVKSDAIDRHDLSSVRM 1086
MVKS D DLS + +
Sbjct: 208 MVKSSVADEFDLSDLAL 258
Score = 37.7 bits (76), Expect = 0.62
Identities = 21/66 (31%), Positives = 27/66 (40%)
Frame = -1 / -1
Query: 1071 EVVAVDGVALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQR 892
EV V AL H G+H+ + AV + + VEA+H H R D
Sbjct: 243 EVELVGHGALHHGQHHGRHDGSEPHAVSHQRAQEGAQVEAVHHHHRALVPERGAADAGDA 64
Query: 891 VHVEHG 874
V VE G
Sbjct: 63 VDVEEG 46
>gb|CW251599.1|CW251599 104_714_11224020_148_35073_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11224020, DNA
sequence
Length = 689
Score = 42.8 bits (87), Expect(2) = 1e-007
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1 / -3
Query: 1231 LPVKSGACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEA 1389
L + G + +A++K + + GEI +RG +MKGYLNNPEA
Sbjct: 168 LKARQGVSVLSLADADVKNAETMVSVPRDGKTVGEIVLRGSSVMKGYLNNPEA 10
Score = 39.6 bits (80), Expect(2) = 1e-007
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1 / -3
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQLV 816
L Y+SGTT PKGV+ SHRG S L+
Sbjct: 684 LNYTSGTTSAPKGVVYSHRGAYLSTTSLL 598
Score = 34.1 bits (68), Expect(2) = 2.6
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / +2
Query: 1397 FAVASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSSA 1272
F+ ASGLLR PF+ LP ISP L R + S +SA
Sbjct: 2 FSFASGLLR*PFMTLLPRRTISPTVLPSRGTLTMVSAFLTSA 127
Score = 22.6 bits (43), Expect(2) = 2.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2 / +2
Query: 818 STSCATLVTSPRCDSITPLGSPVVPD 741
S+ L +PR TPLG+ VVP+
Sbjct: 596 SSRLVVLRYAPRWL*TTPLGADVVPE 673
>gb|CD234219.1|CD234219 SS1_26_B12.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_26_B12_A012 3', mRNA sequence
Length = 638
Score = 52.4 bits (108), Expect(2) = 1e-007
Identities = 25/55 (45%), Positives = 32/55 (58%)
Frame = +1 / +3
Query: 1462 IFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVV 1626
I I DR K++I G + E+E +L HP++ DAAVV M GE P AFVV
Sbjct: 24 IEIKDRSKDVIISGGENICSKEVEEVLFRHPAVADAAVVAMPHPHWGETPCAFVV 188
Score = 42.3 bits (86), Expect = 0.026
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -2 / -2
Query: 1625 TTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKI 1461
TT A G+SPQ + TTAAS GW ++P +++SL RS + +
Sbjct: 187 TTKAHGVSPQWGCGMATTAASATAGWRNSTSSTSLLHMFSPPLMITSLDRSLISM 23
Score = 26.3 bits (51), Expect(2) = 1e-007
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +1 / +3
Query: 1645 ITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
++ED++ + K++ + K+ V A+P+ GK+ + LR
Sbjct: 210 LSEDDVLAFCRKRMARFMVPKKVQVVGALPRNALGKVEKVKLR 338
>gb|CD423579.1|CD423579 SA1_24_E02.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_24_E02_A002 3', mRNA sequence
Length = 558
Score = 53.8 bits (111), Expect(2) = 1e-007
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +1 / +1
Query: 1474 DRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITE 1653
DR+K++I G ++ E+E ++ HP++++A+VV D+ GE P AFV G+
Sbjct: 25 DRMKDVIISGGENISSLEVEKVVCTHPAVLEASVVARADERWGESPCAFVTLKDGAADGS 204
Query: 1654 DE 1659
DE
Sbjct: 205 DE 210
Score = 24.9 bits (48), Expect(2) = 1e-007
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 1729 IPKAPSGKILRKDLRAK 1779
+PK +GKI + +LRAK
Sbjct: 295 LPKTATGKIKKHELRAK 345
>gb|CW494697.1|CW494697 fsbb001f286b24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f286b24, DNA
sequence
Length = 555
Score = 53.8 bits (111), Expect(2) = 1e-007
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +1 / -1
Query: 1474 DRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITE 1653
DR+K++I G ++ E+E ++ HP++++A+VV D+ GE P AFV G+
Sbjct: 459 DRMKDVIISGGENISSLEVEKVVCTHPAVLEASVVARADERWGESPCAFVTLKDGAADGS 280
Query: 1654 DE 1659
DE
Sbjct: 279 DE 274
Score = 24.9 bits (48), Expect(2) = 1e-007
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / -1
Query: 1729 IPKAPSGKILRKDLRAK 1779
+PK +GKI + +LRAK
Sbjct: 189 LPKTATGKIKKHELRAK 139
>gb|CL185925.1|CL185925 104_400_10899868_116_32405_010 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899868, DNA
sequence
Length = 703
Score = 59.7 bits (124), Expect = 1e-007
Identities = 24/85 (28%), Positives = 46/85 (54%)
Frame = +1 / -2
Query: 1510 QVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVV 1689
+++P E++A+L+ P + A + DD GE V+ GS + E+E+ + + +
Sbjct: 678 KISPIEVDAVLLGAPGVAQAVSFGVPDDKYGEEINCAVIPRDGSALREEEVLAHCRRNLA 499
Query: 1690 FYKRLHKIFFVEAIPKAPSGKILRK 1764
+K K+F + +PK +GKI R+
Sbjct: 498 SFKVPKKVFITDDLPKTATGKIQRR 424
>gb|CW094071.1|CW094071 104_457_11000117_116_37473_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11000117, DNA
sequence
Length = 609
Score = 59.7 bits (124), Expect = 1e-007
Identities = 28/91 (30%), Positives = 45/91 (49%)
Frame = +1 / +3
Query: 292 LIDGATGETLTFGDVDRLSRRVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGA 471
L+D ATGE L+F + R +A +R+ + + G +L P ++ + + A GA
Sbjct: 255 LLDAATGEVLSFPEFLSQVRALAGALRSVVRLGRGDVAFILAPTRLDIPVLYFALLSFGA 434
Query: 472 AATTANPLHTPPEIAKQAAASGATVVITEPA 564
+ NP T E+A+ A SGA+V A
Sbjct: 435 VVSPVNPTLTADEVARLVALSGASVAFAVSA 527
>gb|CW046323.1|CW046323 104_283_10510123_115_30138 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10510123, DNA
sequence
Length = 560
Score = 59.3 bits (123), Expect = 2e-007
Identities = 23/62 (37%), Positives = 41/62 (66%)
Frame = +1 / -2
Query: 982 VKRHGITIVPLVLPIAVEMVKSDAIDRHDLSSVRMVISGAAPMGKELQDLLRAKLPRAVL 1161
V+RH +T + V P+ + + K ++ ++DLSS+R + SGAAP+GK++ + + P AV+
Sbjct: 550 VQRHRVTHLFCVPPVMIALAKLGSVGKYDLSSLRFIGSGAAPLGKDVMEGVAKNFPEAVI 371
Query: 1162 GQ 1167
Q
Sbjct: 370 AQ 365
Score = 38.6 bits (78), Expect = 0.33
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = -1 / +2
Query: 1167 LSEHGARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGVALDHLHRDGQHERHDRDAVP 988
L HG ++ + +LA R R D R EVV D L + D +H D VP
Sbjct: 365 LXNHGFWKVLGHALHHVLAERRCARADEPERAEVVFPDTPELGERYHDRRHAEEVSDTVP 544
Query: 987 LH 982
LH
Sbjct: 545 LH 550
>gb|CW373427.1|CW373427 fsbb001f049n04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f049n04, DNA
sequence
Length = 707
Score = 43.2 bits (88), Expect(3) = 2e-007
Identities = 14/26 (53%), Positives = 23/26 (88%)
Frame = +1 / +1
Query: 1693 YKRLHKIFFVEAIPKAPSGKILRKDL 1770
YK++ K+ FV++IP+ PSGK+LR++L
Sbjct: 367 YKKIRKVCFVDSIPRLPSGKLLRREL 444
Score = 29.0 bits (57), Expect(3) = 2e-007
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1 / +1
Query: 1630 SGGSGITEDEIKQYVAKQV 1686
+G +TED+I ++VAKQV
Sbjct: 178 NGSKNLTEDQIMEFVAKQV 234
Score = 28.1 bits (55), Expect(3) = 2e-007
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1 / +1
Query: 1573 VVQMKDDSCGEIPVAFVVASGGS 1641
+++ D+ G+IP+AFVV GS
Sbjct: 118 LLRYPDEEVGQIPMAFVVRQNGS 186
>gb|CW396384.1|CW396384 fsbb001f084m22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f084m22, DNA
sequence
Length = 590
Score = 58.8 bits (122), Expect = 3e-007
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / -2
Query: 1366 GYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLK 1485
GYL ++T++ DSEGWL TGD+ Y+D ++IVDRLK
Sbjct: 121 GYLGEEDSTSEIFDSEGWLRTGDLCYIDQDGFVYIVDRLK 2
>gb|CW117751.1|CW117751 104_493_11107822_148_34613_081 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11107822, DNA
sequence
Length = 617
Score = 54.2 bits (112), Expect(2) = 5e-007
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +1 / -3
Query: 1525 ELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRL 1704
E+E +L +HP++++AAVV DD GE P AFV G+ TE EI + +++ Y
Sbjct: 606 EVETLLSSHPAVLEAAVVARPDDHWGETPCAFVKLKDGASATEAEIIGFCRERLPRYMAP 427
Query: 1705 HKIFF 1719
+ F
Sbjct: 426 RTVVF 412
Score = 39.1 bits (79), Expect = 0.24
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = -2 / +2
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLG 1551
+IS+SV P + TNA G+SPQ SS + TTAAS G
Sbjct: 467 MISASVALAPSLSFTNAHGVSPQWSSGLATTAASRTAG 580
Score = 22.1 bits (42), Expect(2) = 5e-007
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1 / -3
Query: 1723 EAIPKAPSGKILRKDLRAK 1779
E +PK P+GK + LR K
Sbjct: 411 EDLPKTPTGKTQKFVLREK 355
>gb|CF757766.1|CF757766 DSAF1_22_A08.g1_A011 Drought-stressed after flowering Sorghum bicolor
cDNA clone DSAF1_22_A08_A011 3', mRNA sequence
Length = 461
Score = 57.9 bits (120), Expect = 5e-007
Identities = 21/41 (51%), Positives = 33/41 (80%)
Frame = +1 / +3
Query: 1648 TEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDL 1770
T+ ++ +VAKQV YK++ ++ FV AIPK+P+GKILR++L
Sbjct: 21 TKQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 143
>gb|CW327532.1|CW327532 104_823_11478800_116_35982_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478800, DNA
sequence
Length = 686
Score = 44.1 bits (90), Expect(2) = 6e-007
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1 / +3
Query: 1681 QVVFYKRLHKIFFVEAIPKAPSGKILRKDL 1770
QV YK++ K+ FV IPK SGKILRKDL
Sbjct: 444 QVAPYKKVRKVAFVTEIPKNASGKILRKDL 533
Score = 37.7 bits (76), Expect = 0.62
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -2 / -2
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTC 1680
D + +RSFL ILPD LG++ T + L* TC
Sbjct: 550 DVASLMRSFLSILPDAFLGISVTNATFLTFL*GATC 443
Score = 35.4 bits (71), Expect(2) = 6e-007
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1 / +1
Query: 1510 QVAPAELEAMLIAHPSIVDAAVV 1578
QV PAELEA+L+ H I D AV+
Sbjct: 31 QVPPAELEALLLTHSEIQDVAVI 99
>gb|CW345533.1|CW345533 104_848_11488543_116_36209_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488543, DNA
sequence
Length = 690
Score = 57.4 bits (119), Expect = 7e-007
Identities = 20/34 (58%), Positives = 30/34 (88%)
Frame = +1 / -1
Query: 1681 QVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKL 1782
QV++YK++ ++ F++ IPKAPSGKILRK+LR +L
Sbjct: 417 QVIYYKKVREVIFIDKIPKAPSGKILRKELRKQL 316
Score = 51.9 bits (107), Expect = 3e-005
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +1 / -1
Query: 1600 GEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAI 1731
GEIPVAFV + GS ++ED++KQ+VAK+V+F L F+ +
Sbjct: 639 GEIPVAFVAKAKGSELSEDDVKQFVAKEVIFIFLLPPFEFMHVL 508
Score = 35.9 bits (72), Expect(2) = 0.028
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = -2 / +2
Query: 1691 NTTCFATYCLISSSVIPEPPDATTNATGISPQESS 1587
N T AT CL SSS+ P T ATGISP S
Sbjct: 548 NITSLATNCLTSSSLSSLPLALATKATGISPISGS 652
Score = 27.6 bits (54), Expect(2) = 0.028
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2 / +2
Query: 1772 LRSFLKILPDGALGMASTK 1716
L S ILPDGALG+ S K
Sbjct: 326 LSSLRNILPDGALGILSMK 382
>gb|CW465136.1|CW465136 fsbb001f215m01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f215m01, DNA
sequence
Length = 483
Score = 57.4 bits (119), Expect = 7e-007
Identities = 20/34 (58%), Positives = 30/34 (88%)
Frame = +1 / +1
Query: 1681 QVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKL 1782
QV++YK++ ++ F++ IPKAPSGKILRK+LR +L
Sbjct: 235 QVIYYKKVREVIFIDKIPKAPSGKILRKELRKQL 336
Score = 51.9 bits (107), Expect = 3e-005
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +1 / +1
Query: 1600 GEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAI 1731
GEIPVAFV + GS ++ED++KQ+VAK+V+F L F+ +
Sbjct: 13 GEIPVAFVAKAKGSELSEDDVKQFVAKEVIFIFLLPPFEFMHVL 144
Score = 35.4 bits (71), Expect(2) = 0.027
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -2 / -2
Query: 1691 NTTCFATYCLISSSVIPEPPDATTNATGISP 1599
N T AT CL SSS+ P T ATGISP
Sbjct: 104 NITSLATNCLTSSSLSSLPLALATKATGISP 12
Score = 27.6 bits (54), Expect(2) = 0.027
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2 / -2
Query: 1772 LRSFLKILPDGALGMASTK 1716
L S ILPDGALG+ S K
Sbjct: 326 LSSLRNILPDGALGILSMK 270
>gb|CW029877.1|CW029877 104_257_10499927_116_30402 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499927, DNA
sequence
Length = 812
Score = 44.1 bits (90), Expect(2) = 8e-007
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1 / -1
Query: 1681 QVVFYKRLHKIFFVEAIPKAPSGKILRKDL 1770
QV YK++ K+ FV IPK SGKILRKDL
Sbjct: 317 QVAPYKKVRKVAFVTEIPKNASGKILRKDL 228
Score = 37.7 bits (76), Expect = 0.62
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -2 / +1
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTC 1680
D + +RSFL ILPD LG++ T + L* TC
Sbjct: 211 DVASLMRSFLSILPDAFLGISVTNATFLTFL*GATC 318
Score = 35.4 bits (71), Expect(2) = 8e-007
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1 / -2
Query: 1510 QVAPAELEAMLIAHPSIVDAAVV 1578
QV PAELEA+L+ H I D AV+
Sbjct: 730 QVPPAELEALLLTHSEIQDVAVI 662
>gb|CW065573.1|CW065573 104_312_10523225_115_30130 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10523225, DNA
sequence
Length = 387
Score = 56.5 bits (117), Expect = 1e-006
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +1 / -3
Query: 1513 VAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVF 1692
++ E+E+++ +HP++++AAVV DD GE P AFV G+ TE EI + +++
Sbjct: 382 ISSIEVESVIFSHPAVLEAAVVARPDDHWGETPCAFVKLKDGASATEAEIISFCRERLPH 203
Query: 1693 YKRLHKIFF 1719
Y + F
Sbjct: 202 YMAPKTVVF 176
Score = 42.3 bits (86), Expect = 0.026
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = -2 / +3
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGW 1548
+IS+SV P + TNA G+SPQ SS TTAAS GW
Sbjct: 231 MISASVALAPSLSLTNAHGVSPQWSSGRATTAASRTAGW 347
>gb|CW445620.1|CW445620 fsbb001f170n20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f170n20, DNA
sequence
Length = 655
Score = 56.1 bits (116), Expect = 2e-006
Identities = 26/75 (34%), Positives = 42/75 (56%)
Frame = +1 / +2
Query: 943 IMKRFDTLRMFELVKRHGITIVPLVLPIAVEMVKSDAIDRHDLSSVRMVISGAAPMGKEL 1122
+M RFD + V+RH +T + P + + K R+DLSS+R + SGAAP+GK++
Sbjct: 2 VMARFDVDAVLAAVERHRVTYIFGAPPAMIALAKHGGGRRYDLSSLRCIGSGAAPLGKDV 181
Query: 1123 QDLLRAKLPRAVLGQ 1167
+ + P A + Q
Sbjct: 182 MVAMADRFPGADIVQ 226
Score = 37.3 bits (75), Expect = 0.85
Identities = 26/75 (34%), Positives = 29/75 (38%)
Frame = -1 / -1
Query: 1167 LSEHGARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGVALDHLHRDGQHERHDRDAVP 988
L GA E + +LA RG R D R EVV L + RDAV
Sbjct: 226 LDNVGAGESVSHSHHDVLAERRGARADAPERAEVVPAAPAVLGERDHRRRRAEDVRDAVA 47
Query: 987 LHQLEHAESVEALHD 943
L EH VE HD
Sbjct: 46 LDGGEHGVDVEPGHD 2
>gb|BG558803.1|BG558803 RHIZ2_56_G07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 379
Score = 55.1 bits (114), Expect = 4e-006
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / +1
Query: 421 NSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
NS+ F +A LA LGA TTANPL+TP EIAKQ A + V T
Sbjct: 88 NSIHFPVAALATMSLGAVLTTANPLNTPAEIAKQVADARPVVAFT 222
Score = 44.1 bits (90), Expect = 0.007
Identities = 23/45 (51%), Positives = 25/45 (55%)
Frame = -2 / -3
Query: 554 VMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEF 420
V T +A CLAIS GV SGLAVV APR A A+ EF
Sbjct: 221 VKATTGRASATCLAISAGVLSGLAVVRTAPRDMVASAATGKWMEF 87
>gb|CW114398.1|CW114398 104_489_11105970_148_34566_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11105970, DNA
sequence
Length = 635
Score = 47.3 bits (97), Expect(2) = 4e-006
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1 / -1
Query: 1246 GACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKG 1368
G+ G +V E KI+D ET L NQ GEIC+RG +M+G
Sbjct: 197 GSTGALVSGVEAKIVDVETLKCLPPNQLGEICVRGLNIMQG 75
Score = 25.8 bits (50), Expect(2) = 4e-006
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1 / -1
Query: 1153 AVLGQGYGMTEAGPVLSM 1206
A+L QGYGMTE ++S+
Sbjct: 284 ALLLQGYGMTETCGIISL 231
>gb|CF761525.1|CF761525 DSAF1_77_D02.b1_A011 Drought-stressed after flowering Sorghum bicolor
cDNA clone DSAF1_77_D02_A011 5', mRNA sequence
Length = 475
Score = 44.1 bits (90), Expect(2) = 4e-006
Identities = 21/66 (31%), Positives = 36/66 (54%)
Frame = +1 / +3
Query: 1477 RLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITED 1656
R+ ++I G ++ AE+E+ L++HP +AAVV + + G+ AFV G ++D
Sbjct: 3 RVDDVINVSGHRIGTAEVESALVSHPKCAEAAVVGIDHEVKGQGIYAFVTLVDGVPYSDD 182
Query: 1657 EIKQYV 1674
K V
Sbjct: 183 LRKSLV 200
Score = 29.0 bits (57), Expect(2) = 4e-006
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1 / +3
Query: 1672 VAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
V Q+ + KI + +PK SGKI+R+ LR
Sbjct: 207 VRSQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 308
>gb|CD212702.1|CD212702 HS1_16_E02.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_16_E02_A012 3', mRNA sequence
Length = 617
Score = 49.2 bits (101), Expect(2) = 6e-006
Identities = 23/58 (39%), Positives = 35/58 (60%)
Frame = +1 / +1
Query: 1468 IVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGS 1641
I DR K++I G ++ E+E++L +HP++ +AAVV D GE P AFV G+
Sbjct: 19 IRDRSKDVIISGGENISSVEVESVLYSHPAVNEAAVVARPDGFWGETPCAFVGLKEGA 192
Score = 43.2 bits (88), Expect = 0.014
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = -2 / -1
Query: 1637 PPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKI 1461
P + TNA G+SPQ+ S TTAAS GW ++P +++SL RS + +
Sbjct: 188 PSLSPTNAHGVSPQKPSGRATTAASFTAGWL*STDSTSTLLMFSPPLMITSLDRSRISM 12
Score = 23.5 bits (45), Expect(2) = 6e-006
Identities = 10/48 (20%), Positives = 23/48 (47%)
Frame = +1 / +1
Query: 1630 SGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
+ +T ++ + +++ Y + F + +PK +GKI + LR
Sbjct: 190 ASAGAVTAADVIAWCRQRMPHYMVPRTVVFRDELPKTSTGKIQKYVLR 333
>gb|CF427259.1|CF427259 PH1_4_B12.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_4_B12_A002 5', mRNA sequence
Length = 612
Score = 35.4 bits (71), Expect(3) = 6e-006
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1 / +3
Query: 1384 EATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIK 1497
E K + +GW HTGDIG + I+DR K + K
Sbjct: 333 EDLTKEVLIDGWFHTGDIGEWQPDGCMKIIDRKKNIFK 446
Score = 31.3 bits (62), Expect(3) = 6e-006
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GEICIRG+ L GY + T + +
Sbjct: 282 GEICIRGETLFSGYYKREDLTKEVL 356
Score = 28.1 bits (55), Expect(3) = 6e-006
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +1 / +3
Query: 1075 SVRMVISGAAPMGKELQDLLR 1137
+VR+++SGAAP+ +++ LR
Sbjct: 36 NVRVILSGAAPLATHVEEYLR 98
>gb|BG322694.1|BG322694 EM1_13_B08.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 509
Score = 54.2 bits (112), Expect = 7e-006
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1 / +1
Query: 1345 RGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIK 1497
RG + GY + T + ID +GWLHTGDIG G + I+DR K + K
Sbjct: 10 RGPIVFHGYYKDEVQTKEVIDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 162
>gb|CW271690.1|CW271690 104_744_11403133_148_36222_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403133, DNA
sequence
Length = 634
Score = 40.0 bits (81), Expect(2) = 1e-005
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +1 / +3
Query: 1264 VRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKG 1368
V E KI+D +T L NQ GEIC+RG +M+G
Sbjct: 3 VIGVEAKIVDTKTMKHLPPNQLGEICVRGPNIMEG 107
Score = 35.0 bits (70), Expect(2) = 1e-005
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +1 / +2
Query: 1411 EGWLHTGDIGYVDD 1452
+GWLHTGD+GY D+
Sbjct: 593 QGWLHTGDLGYFDE 634
Score = 30.4 bits (60), Expect(2) = 4.3
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2 / -2
Query: 1451 SSTYPMSPVCSHP 1413
SS YP SPVC+HP
Sbjct: 633 SSKYPRSPVCNHP 595
Score = 25.4 bits (49), Expect(2) = 4.3
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -2 / -1
Query: 1367 PFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLT 1263
P I P QISP W R V S IF+S +T
Sbjct: 106 PSIMFGPRTQISPSWFGGRCFIVFVSTIFASTPMT 2
>gb|CW422442.1|CW422442 fsbb001f131l15k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f131l15, DNA
sequence
Length = 716
Score = 43.7 bits (89), Expect(2) = 1e-005
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +1 / +1
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHP 1554
GWL TGD+G I I DR K++I G + E+E++L HP
Sbjct: 571 GWLRTGDLGVRHRDGYIQIKDRSKDIIISGGENITSIEVESVLFGHP 711
Score = 27.6 bits (54), Expect(2) = 1e-005
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1 / +1
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GE+ +RG +M GY + AT + +
Sbjct: 490 GEVMLRGNTVMSGYYKDAAATEEAV 564
>gb|CW158010.1|CW158010 104_561_11147826_116_36390_069 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11147826, DNA
sequence
Length = 729
Score = 52.8 bits (109), Expect = 2e-005
Identities = 24/67 (35%), Positives = 33/67 (49%)
Frame = +1 / -3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGF 1509
G I RG M GY N + + GWL TGD G++D ++++ R K IK G
Sbjct: 631 GNILTRGFHTMAGYWANNKVDSSDCVRNGWLDTGDTGWIDKAGNLWLMGRQKGRIKTGGE 452
Query: 1510 QVAPAEL 1530
V P E+
Sbjct: 451 NVYPEEV 431
>gb|BG357101.1|BG357101 OV2_9_H07.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 572
Score = 43.2 bits (88), Expect(2) = 2e-005
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +1 / +3
Query: 736 YSSGTTGLPKGVMLSHRGLVTSVA 807
Y+SGTTG PKGV+LSH L+ +VA
Sbjct: 267 YTSGTTGTPKGVVLSHENLIANVA 338
Score = 27.6 bits (54), Expect(2) = 2e-005
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1 / +3
Query: 814 VDGDNPNLHFREDDVVLCVLPMFHVY 891
V G + N+ F DV + LP+ H+Y
Sbjct: 333 VAGSSLNIKFYPSDVYISYLPLAHIY 410
>gb|BM318634.1|BM318634 PI1_15_H03.b9_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 472
Score = 43.2 bits (88), Expect(2) = 2e-005
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +1 / +3
Query: 736 YSSGTTGLPKGVMLSHRGLVTSVA 807
Y+SGTTG PKGV+LSH L+ +VA
Sbjct: 234 YTSGTTGTPKGVVLSHENLIANVA 305
Score = 27.6 bits (54), Expect(2) = 2e-005
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1 / +3
Query: 814 VDGDNPNLHFREDDVVLCVLPMFHVY 891
V G + N+ F DV + LP+ H+Y
Sbjct: 300 VAGSSLNIKFYPSDVYISYLPLAHIY 377
>gb|BZ340466.1|BZ340466 ic39b03.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic39b03 5', DNA sequence
Length = 646
Score = 52.4 bits (108), Expect = 2e-005
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = +1 / -1
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGF 1509
G I RG M GY N + + GWL TGD G++D ++++ R K IK G
Sbjct: 199 GNILTRGFHTMAGYWANNKVDSSDCVRNGWLDTGDTGWIDKAGNLWLMGRQKGRIKTGGE 20
Query: 1510 QVAPAE 1527
V P E
Sbjct: 19 NVYPEE 2
>gb|CW344134.1|CW344134 104_846_11487796_148_36191_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11487796, DNA
sequence
Length = 652
Score = 52.4 bits (108), Expect = 2e-005
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +1 / -3
Query: 1081 RMVISGAAPMGKELQDLLRAKLPRAVLGQ 1167
RMV+SGAAPMGK+++D AKLP AVLGQ
Sbjct: 650 RMVLSGAAPMGKDIEDAFMAKLPGAVLGQ 564
Score = 47.3 bits (97), Expect = 8e-004
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = +2 / -1
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDR 1168
W S PRPW R+ RT PSS APCSDR
Sbjct: 646 WCSPAPRPWGRTSRTPSWPSSPAPCSDR 563
Score = 45.1 bits (92), Expect = 0.004
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = -2 / +1
Query: 1166 CPSTARGSLARSRSCSSLPMGAAPEMTM 1083
CPSTA GSLA S S PMGAAPE T+
Sbjct: 565 CPSTAPGSLAMKASSMSFPMGAAPESTI 648
Score = 41.8 bits (85), Expect = 0.036
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = -1 / +3
Query: 1167 LSEHGARELGAQQVLQLLAHGRGPRDDH 1084
LSEHGA ELG + VL +L HGRG + H
Sbjct: 564 LSEHGAGELGHEGVLDVLPHGRGAGEHH 647
>gb|CW165081.1|CW165081 104_573_11152317_116_36470_091 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11152317, DNA
sequence
Length = 664
Score = 46.0 bits (94), Expect(2) = 3e-005
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +1 / -1
Query: 1246 GACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKG 1368
G+ G +V E KI+D +T L NQ GEIC+RG +M+G
Sbjct: 223 GSTGALVIGVEAKIVDTKTMKHLPPNQLGEICVRGPNIMEG 101
Score = 24.0 bits (46), Expect(2) = 3e-005
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / -1
Query: 1156 VLGQGYGMTEAGPVLSM 1206
+L QGYGMTE ++S+
Sbjct: 307 LLLQGYGMTETCGIISL 257
Database: Sorghum_nucl_with_EST.fasta
Posted date: May 2, 2006 3:37 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,905,515,754
Number of Sequences: 832831
Number of extensions: 29823229
Number of successful extensions: 350454
Number of sequences better than 10.0: 1325
length of database: 163,786,556
effective HSP length: 57
effective length of database: 116,315,189
effective search space used: 70254374156
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)