TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4695478.2.1
(1201 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE363139.1|BE363139 DG1_9_D02.g1_A002 Dark Grown 1 (DG1)... 185 2e-068
gb|CD213428.1|CD213428 HS1_40_A07.g1_A012 Heat-shocked seed... 189 1e-065
gb|CW261808.1|CW261808 104_729_11229713_148_35203_077 Sorgh... 122 1e-064
gb|BE359158.1|BE359158 DG1_39_C02.b1_A002 Dark Grown 1 (DG1... 245 9e-064
gb|CN132257.1|CN132257 OX1_5_C03.b1_A002 Oxidatively-stress... 205 1e-063
gb|CN132335.1|CN132335 OX1_5_C03.g1_A002 Oxidatively-stress... 136 3e-063
gb|CN125662.1|CN125662 RHOH1_12_B03.g1_A002 Acid- and alkal... 108 5e-056
gb|CD206423.1|CD206423 HS1_22_G03.g1_A012 Heat-shocked seed... 210 3e-053
gb|CN124163.1|CN124163 RHOH1_3_B09.b1_A002 Acid- and alkali... 184 4e-051
gb|BE363053.1|BE363053 DG1_9_D02.b1_A002 Dark Grown 1 (DG1)... 203 6e-051
gb|CW403429.1|CW403429 fsbb001f095c10f0 Sorghum methylation... 88 2e-049
gb|CN135147.1|CN135147 OX1_30_G11.g1_A002 Oxidatively-stres... 123 2e-048
gb|CW168296.1|CW168296 104_577_11154068_148_36493_066 Sorgh... 107 2e-046
gb|CN152656.1|CN152656 WOUND1_83_A06.g1_A002 Wounded leaves... 107 3e-044
gb|CN124236.1|CN124236 RHOH1_3_B09.g1_A002 Acid- and alkali... 130 7e-044
gb|CN145669.1|CN145669 WOUND1_34_B03.g1_A002 Wounded leaves... 84 1e-043
gb|BE357345.1|BE357345 DG1_148_D02.g1_A002 Dark Grown 1 (DG... 169 2e-043
gb|BE360688.1|BE360688 DG1_66_C04.b2_A002 Dark Grown 1 (DG1... 100 6e-043
gb|BZ349735.1|BZ349735 hr45b01.g1 WGS-SbicolorF (JM107 adap... 107 1e-042
gb|BE357273.1|BE357273 DG1_148_D02.b1_A002 Dark Grown 1 (DG... 174 2e-042
gb|CX607102.1|CX607102 ANR1_6_E09.g1_A002 Anaerobic roots S... 120 2e-041
gb|CN125588.1|CN125588 RHOH1_12_B03.b1_A002 Acid- and alkal... 112 5e-041
gb|CX614598.1|CX614598 GABR1_15_C04.b1_A002 GA- or brassino... 112 5e-041
gb|CN146030.1|CN146030 WOUND1_37_A04.b1_A002 Wounded leaves... 112 5e-041
gb|CB925013.1|CB925013 ABA1_29_B06.g1_A012 Abscisic acid-tr... 170 5e-041
gb|CW031414.1|CW031414 104_260_10500796_114_30365 Sorghum m... 75 8e-040
gb|CF428507.1|CF428507 PH1_15_D07.g1_A002 Phosphorous-defic... 165 2e-039
gb|CF480908.1|CF480908 POL1_68_F11.g1_A002 Pollen Sorghum b... 107 4e-039
gb|BG048617.1|BG048617 OV1_14_H08.b1_A002 Ovary 1 (OV1) Sor... 144 9e-039
gb|CW403430.1|CW403430 fsbb001f095c10k0 Sorghum methylation... 110 3e-038
gb|AW922257.1|AW922257 DG1_17_G01.b1_A002 Dark Grown 1 (DG1... 100 5e-038
gb|BM324463.1|BM324463 PIC1_31_E07.b1_A002 Pathogen-infecte... 137 6e-038
gb|CW192938.1|CW192938 104_615_11179297_116_36769_005 Sorgh... 110 8e-038
gb|CB924988.1|CB924988 ABA1_29_B06.b1_A012 Abscisic acid-tr... 96 2e-037
gb|CD213339.1|CD213339 HS1_40_A07.b1_A012 Heat-shocked seed... 95 4e-037
gb|CD431095.1|CD431095 ETH1_6_A10.g1_A002 Ethylene-treated ... 121 4e-036
gb|CW194134.1|CW194134 104_617_11179939_116_36785_076 Sorgh... 68 8e-035
gb|CD206390.1|CD206390 HS1_22_H01.g1_A012 Heat-shocked seed... 149 1e-034
gb|CN147237.1|CN147237 WOUND1_48_B05.g1_A002 Wounded leaves... 75 2e-034
gb|AW671852.1|AW671852 LG1_352_C05.b1_A002 Light Grown 1 (L... 109 7e-034
gb|CN127950.1|CN127950 RHOH1_26_C10.b1_A002 Acid- and alkal... 125 2e-033
emb|AX512962.1| Sequence 7 from Patent WO02063021 73 3e-033
gb|CL173566.1|CL173566 104_377_10890963_116_31793_099 Sorgh... 89 6e-033
gb|CF756225.1|CF756225 DSAF1_4_G03.b1_A011 Drought-stressed... 98 1e-032
gb|BE359210.1|BE359210 DG1_39_C02.g1_A002 Dark Grown 1 (DG1... 96 2e-032
gb|BG240109.1|BG240109 OV1_18_A05.b1_A002 Ovary 1 (OV1) Sor... 128 2e-032
gb|CN138545.1|CN138545 OX1_64_A03.g1_A002 Oxidatively-stres... 129 1e-031
gb|CF482349.1|CF482349 POL1_6_A05.g1_A002 Pollen Sorghum bi... 107 1e-031
gb|CB925802.1|CB925802 ABA1_23_F05.g1_A012 Abscisic acid-tr... 59 1e-031
gb|CB925645.1|CB925645 ABA1_22_G02.g1_A012 Abscisic acid-tr... 75 5e-031
gb|CW139362.1|CW139362 104_529_11135198_148_34909_055 Sorgh... 88 5e-031
gb|CD205252.1|CD205252 HS1_13_D05.b1_A012 Heat-shocked seed... 96 1e-030
gb|CF428334.1|CF428334 PH1_14_C04.g1_A002 Phosphorous-defic... 56 2e-030
gb|CW194135.1|CW194135 104_617_11179939_148_36789_076 Sorgh... 64 3e-030
gb|CF429087.1|CF429087 PH1_19_G12.g1_A002 Phosphorous-defic... 109 8e-030
gb|CN129279.1|CN129279 RHOH1_34_B10.g1_A002 Acid- and alkal... 129 9e-030
gb|CN137521.1|CN137521 OX1_57_G07.g1_A002 Oxidatively-stres... 129 9e-030
gb|CN137640.1|CN137640 OX1_58_D03.g1_A002 Oxidatively-stres... 129 9e-030
gb|CX610621.1|CX610621 ANR1_19_G06.g1_A002 Anaerobic roots ... 129 9e-030
gb|CN128033.1|CN128033 RHOH1_26_C10.g1_A002 Acid- and alkal... 108 1e-029
gb|CW340854.1|CW340854 104_842_11486016_116_36172_096 Sorgh... 99 2e-029
gb|CW340855.1|CW340855 104_842_11486016_148_36171_096 Sorgh... 99 2e-029
gb|CL178820.1|CL178820 104_387_10894861_116_31906_157 Sorgh... 78 4e-029
gb|CW192819.1|CW192819 104_615_11179234_148_36775_041 Sorgh... 78 4e-029
gb|CD231600.1|CD231600 SS1_22_F09.g1_A012 Salt-stressed see... 129 7e-029
gb|CD225805.1|CD225805 CCC1_41_H04.g1_A007 Callus culture/c... 61 7e-029
gb|CF428425.1|CF428425 PH1_15_D07.b1_A002 Phosphorous-defic... 90 2e-028
gb|CF758652.1|CF758652 DSAF1_35_A01.g1_A011 Drought-stresse... 102 4e-028
gb|CW098263.1|CW098263 104_464_11002911_148_34364_052 Sorgh... 89 6e-028
gb|CW217859.1|CW217859 104_651_11195875_148_37457_076 Sorgh... 89 7e-028
gb|CW098262.1|CW098262 104_464_11002911_116_34360_052 Sorgh... 89 2e-027
gb|CX608316.1|CX608316 ANR1_37_H09.g1_A002 Anaerobic roots ... 125 2e-027
gb|CW316181.1|CW316181 104_807_11472758_116_35843_055 Sorgh... 103 6e-027
gb|CW338277.1|CW338277 104_838_11484658_116_36129_039 Sorgh... 103 6e-027
gb|BE125424.1|BE125424 DG1_25_G01.b1_A002 Dark Grown 1 (DG1... 100 9e-027
gb|CD213624.1|CD213624 HS1_52_G04.b1_A012 Heat-shocked seed... 72 1e-026
gb|CW181597.1|CW181597 104_596_11163596_148_36653_070 Sorgh... 73 4e-026
gb|CL183456.1|CL183456 104_396_10898188_114_31923_028 Sorgh... 84 4e-026
gb|CW346174.1|CW346174 104_849_11488883_148_36218_040 Sorgh... 100 5e-026
gb|CX614668.1|CX614668 GABR1_15_C04.g1_A002 GA- or brassino... 91 1e-025
gb|BM328785.1|BM328785 PIC1_26_E07.g1_A002 Pathogen-infecte... 118 1e-025
gb|CB927150.1|CB927150 ABA1_13_F08.g1_A012 Abscisic acid-tr... 118 1e-025
gb|CF432928.1|CF432928 NIT1_19_B11.g1_A002 Nitrogen-deficie... 109 2e-025
gb|CW266537.1|CW266537 104_736_11232481_116_35281_009 Sorgh... 80 3e-025
gb|CW480229.1|CW480229 fsbb001f239d02f0 Sorghum methylation... 100 1e-024
gb|CW139361.1|CW139361 104_529_11135198_116_34905_055 Sorgh... 70 2e-024
gb|CD228254.1|CD228254 CCC1_6_B12.g1_A007 Callus culture/ce... 75 3e-024
gb|CB926819.1|CB926819 ABA1_10_G05.g1_A012 Abscisic acid-tr... 75 3e-024
gb|CD206335.1|CD206335 HS1_22_G03.b1_A012 Heat-shocked seed... 96 7e-024
gb|CW332608.1|CW332608 104_830_11481507_116_36036_010 Sorgh... 78 1e-023
gb|CW203138.1|CW203138 104_629_11185470_116_36913_021 Sorgh... 103 2e-023
gb|BM324287.1|BM324287 PIC1_26_E07.b1_A002 Pathogen-infecte... 85 2e-023
gb|CW185694.1|CW185694 104_603_11166185_148_36702_073 Sorgh... 108 3e-023
gb|CW234023.1|CW234023 104_687_11213759_116_37381_088 Sorgh... 95 5e-023
gb|CW181342.1|CW181342 104_596_11163456_116_36654_092 Sorgh... 108 5e-023
gb|CW338278.1|CW338278 104_838_11484658_148_36128_039 Sorgh... 90 5e-023
gb|CW482651.1|CW482651 fsbb001f242n16k0 Sorghum methylation... 73 8e-023
gb|CW317382.1|CW317382 104_809_11473385_148_35865_077 Sorgh... 89 1e-022
gb|BI211450.1|BI211450 IP1_60_H10.b1_A002 Immature pannicle... 73 4e-022
gb|BI351580.1|BI351580 IP1_72_F10.b1_A002 Immature pannicle... 73 4e-022
gb|AF010283.1| Sorghum bicolor ADP-glucose pyrophosphorylas... 53 6e-022
gb|CW183575.1|CW183575 104_599_11164688_148_36677_024 Sorgh... 86 7e-022
gb|CW269378.1|CW269378 104_740_11401813_116_36229_055 Sorgh... 86 7e-022
gb|CF756307.1|CF756307 DSAF1_4_G03.g1_A011 Drought-stressed... 106 7e-022
gb|CL161050.1|CL161050 104_352_10805442_116_31827_114 Sorgh... 85 9e-022
gb|CW494628.1|CW494628 fsbb001f286a06f0 Sorghum methylation... 85 9e-022
gb|BM323476.1|BM323476 PIC1_19_G04.b1_A002 Pathogen-infecte... 61 9e-022
gb|BZ780254.1|BZ780254 ii38c12.g1 WGS-SbicolorF (DH5a methy... 73 1e-021
gb|CL183457.1|CL183457 104_396_10898188_116_31924_028 Sorgh... 73 1e-021
gb|CW065681.1|CW065681 104_312_10523281_114_30128 Sorghum m... 85 2e-021
gb|CW180919.1|CW180919 104_595_11163212_148_36646_070 Sorgh... 62 2e-021
gb|CW299315.1|CW299315 104_782_11463048_116_36235_092 Sorgh... 85 2e-021
gb|AW923197.1|AW923197 DG1_50_E07.b1_A002 Dark Grown 1 (DG1... 105 2e-021
gb|CD228754.1|CD228754 CCC1_9_E11.g1_A007 Callus culture/ce... 105 2e-021
gb|CD430564.1|CD430564 ETH1_19_A12.g1_A002 Ethylene-treated... 105 2e-021
gb|CL161049.1|CL161049 104_352_10805442_114_31826_114 Sorgh... 85 2e-021
gb|CW442746.1|CW442746 fsbb001f162i18k0 Sorghum methylation... 67 6e-021
gb|CD213720.1|CD213720 HS1_52_G04.g1_A012 Heat-shocked seed... 74 7e-021
gb|CN138460.1|CN138460 OX1_64_A03.b1_A002 Oxidatively-stres... 100 9e-021
gb|BE362094.1|BE362094 DG1_84_C11.b1_A002 Dark Grown 1 (DG1... 102 9e-021
>gb|BE363139.1|BE363139 DG1_9_D02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 453
Score = 185 bits (399), Expect(2) = 2e-068
Identities = 71/91 (78%), Positives = 84/91 (92%)
Frame = -2 / +2
Query: 546 LDVVTVNPAVVFGPLLQPTLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYE 367
LDVVT+NP +VFGPLLQPT+N S QFL+YFLKGGPD +R+KLWH+VDVRD ADALLL+YE
Sbjct: 2 LDVVTINPGLVFGPLLQPTVNASIQFLIYFLKGGPDLVRNKLWHVVDVRDLADALLLLYE 181
Query: 366 TPQASGRHICAPHFISARDLLELLKTMYPDD 274
P+A+GRHICAPH ISARDLL+LLK+MYPD+
Sbjct: 182 VPEAAGRHICAPHVISARDLLDLLKSMYPDN 274
Score = 110 bits (234), Expect(2) = 5e-036
Identities = 52/78 (66%), Positives = 55/78 (70%)
Frame = +2 / -1
Query: 314 RALMK*GAQMCLPEACGVSYTSRRASAVSLTSTMCQSLSLIRSGPPFRK*TRN*QLVLSV 493
RAL+ *GAQMCLP A G S +S ASA S TST CQSL L RSGPP RK* RN L +V
Sbjct: 234 RALIT*GAQMCLPAASGTS*SSSSASARSRTSTTCQSLFLTRSGPPLRK*MRNWMLAFTV 55
Query: 494 GCRRGPKTTAGLTVTTSS 547
GC RGP T GL VTTSS
Sbjct: 54 GCSRGPNTNPGLIVTTSS 1
Score = 95.9 bits (203), Expect(2) = 2e-068
Identities = 38/56 (67%), Positives = 43/56 (76%)
Frame = -2 / +2
Query: 276 DYPFISKESIYDMEHPAPMTSDKLKKLGWKVRPLKEPIAETVEFCQHAGFFEDVEG 109
D PFI+KESI D +HPAPMTSDKLK LGW RPL+E I +TVE CQ AGF + V G
Sbjct: 269 DNPFIAKESICDRDHPAPMTSDKLKNLGWSCRPLEETILDTVECCQRAGFLDGVAG 436
Score = 95.0 bits (201), Expect(2) = 6e-029
Identities = 41/91 (45%), Positives = 56/91 (61%)
Frame = +1 / -3
Query: 274 IIRVHRLQQLQQVTRADEMRSANVPAGGLWCLVHKQESIGSXXXXXXXXXXXXHSIRSSF 453
++RVH LQQ+QQV D MR A+VPAG LV +Q+ +G H + +SF
Sbjct: 274 VVRVHALQQVQQVAGTDNMRRADVPAGCFRHLVEQQQRVGEVTDIDDVPELVPHQVGASF 95
Query: 454 QEVDEELTARVERRLQKRAKDHSWIDRHNIQ 546
+EVDEEL A V RRLQ+ A+ WID H+++
Sbjct: 94 EEVDEELDACVHRRLQQGAEHQPWIDSHHVK 2
Score = 77.6 bits (163), Expect(2) = 5e-021
Identities = 42/86 (48%), Positives = 52/86 (60%)
Frame = -1 / +1
Query: 535 DGQSSCGLWPSSAADAQHELSVPRLLPERRT*SNEGQALAHRRRQGHCRCSPACVRDTTS 356
D QS G+ P +AAD + + VP LLP+RR E QALA RR R + A +R S
Sbjct: 13 DYQSRVGVRPPAAADGERKHPVPHLLPQRRPRPGEEQALARRRCP*PRRRAAAALRGA*S 192
Query: 355 LRQAHLRSSFHQRA*PAGAAEDDVP* 278
RQAHLR+S +Q PAG AE+ VP*
Sbjct: 193 SRQAHLRASCYQCPRPAGLAEEHVP* 270
Score = 63.4 bits (132), Expect(2) = 5e-036
Identities = 28/55 (50%), Positives = 34/55 (61%)
Frame = +2 / -1
Query: 107 NPSTSSKNPACWQNSTVSAMGSFSGLTFHPSFLSLSDVIGAGCXXXXXXXXXXKG 271
+P+T S+NPA WQ+STVS + S SG HP F SLS+VIGAG KG
Sbjct: 438 SPATPSRNPARWQHSTVSRIVSSSGRQLHPRFFSLSEVIGAG*SLSHMLSLAMKG 274
Score = 54.7 bits (113), Expect(2) = 6e-029
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +1 / -3
Query: 115 HVLEKPSMLAELNGFRNGFLQRPDLPSQFLELVGRHWSWVLHVVDALLANERVI 276
H ++KPS LA L+ ++ QRP P + L LV H WV+ + ALL NERV+
Sbjct: 430 HTVKKPSPLAALDCVQDRLFQRPAAPPEVL*LVRSHRCWVISITYALLGNERVV 269
Score = 45.5 bits (93), Expect(2) = 5e-021
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = -1 / +1
Query: 271 PFH*QGEHLRHGAPSSNDVRQAQETGMEGQAAEGTHCGNR*VLPACWV 128
PFH QGEH+ +PS++D QA+E +E AA G+ VLPA WV
Sbjct: 274 PFHCQGEHM**RSPSTDDF*QAKEPRVELPAAGRDDPGHSRVLPAGWV 417
>gb|CD213428.1|CD213428 HS1_40_A07.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_40_A07_A012 5', mRNA sequence
Length = 595
Score = 189 bits (407), Expect(3) = 1e-065
Identities = 79/108 (73%), Positives = 86/108 (79%)
Frame = -2 / +3
Query: 1101 RTEEAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASEN 922
R + T CVT A IASWLVKLLLSRGYTVHGTVRDLSD KT HLKRLENA+ N
Sbjct: 75 RRRQPMAGGTTVCVTGAGGFIASWLVKLLLSRGYTVHGTVRDLSDEKTNHLKRLENAAGN 254
Query: 921 LKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPEREMLGPAV 778
L++FKAD+LDYDAMA AV GCQGV HVATPVPS +TDPE +MLGPAV
Sbjct: 255 LRIFKADLLDYDAMAAAVVGCQGVLHVATPVPSENLTDPELQMLGPAV 398
Score = 146 bits (314), Expect(2) = 2e-046
Identities = 70/98 (71%), Positives = 73/98 (74%)
Frame = +2 / -1
Query: 779 TAGPSISRSGSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR*A 958
TAGP+I SGSV F EGTGVAT +TPWHP TA A+AS*S SALK LRF AFS RFR
Sbjct: 397 TAGPNICSSGSVRFSEGTGVATWRTPWHPTTAAAMAS*SSRSALKILRFPAAFSRRFRWF 218
Query: 959 VLLSLRSRTVPWTV*PRERRSLTSHEAMXXXAXVTHAV 1072
V SLRSRTVP TV*PRE RS TSHEAM A VTH V
Sbjct: 217 VFSSLRSRTVPCTV*PRESRSFTSHEAMNPPAPVTHTV 104
Score = 128 bits (275), Expect(2) = 3e-035
Identities = 62/105 (59%), Positives = 73/105 (69%)
Frame = +1 / -3
Query: 778 NSRTQHLSLWIGDLP*RNRSGDMKDSLAPCDCTRHSVVVKDISLEKLEVFGSIL*PLQMS 957
+SRTQHL LW+ + *R+ SG M++SLAP D + H VVV+ ISLE EV GSIL LQM
Sbjct: 398 DSRTQHL*LWVSQVL*RHWSGHMENSLAPDDRSCHGVVVQQISLENPEVSGSILQALQMV 219
Query: 958 GFIVTEVADGAVDGVATGEEELDEPRGDVXXGXRHARRLRAPGGL 1092
+VTEVADGAV GVA GE+EL EPRGD G HA R + GL
Sbjct: 218 RLLVTEVADGAVHGVAAGEQELHEPRGDEPAGAGHAHRCTSGHGL 84
Score = 85.4 bits (180), Expect(2) = 5e-028
Identities = 38/65 (58%), Positives = 43/65 (66%)
Frame = -1 / +2
Query: 973 Q*Q*NRSSEAVRECFRKPQAFQG*CP*LRRYGGCSRRVPGSLSCRHSCSFREDHRSRARD 794
Q*+ + SEA EC RKPQ FQG* LRR+G C RRVPGS C HS +FRE RA +
Sbjct: 203 Q*REDEPSEAPGECCRKPQDFQG*SAGLRRHGSCGRRVPGSSPCGHSSAFREPD*PRATN 382
Query: 793 AGSCC 779
GSCC
Sbjct: 383 VGSCC 397
Score = 62.9 bits (131), Expect(3) = 1e-065
Identities = 20/28 (71%), Positives = 26/28 (92%)
Frame = -2 / +3
Query: 696 EINPKDWPKDKIKDENCWSDKEFCRNEE 613
EI+PKDWP+ K++DE+CWSDKEFCR+ E
Sbjct: 435 EISPKDWPEGKVRDESCWSDKEFCRSIE 518
Score = 61.6 bits (128), Expect(2) = 2e-046
Identities = 25/39 (64%), Positives = 29/39 (74%)
Frame = +1 / -3
Query: 613 LFVPAELFI*PAVLIFDLVFGPVFRVDLNGNHG*NDDHS 729
L PAE F+*PA LI DL F P+F DLNGNHG*++ HS
Sbjct: 518 LNAPAEFFV*PAALISDLTFRPIFGADLNGNHG*HNHHS 402
Score = 61.1 bits (127), Expect(2) = 5e-028
Identities = 26/43 (60%), Positives = 29/43 (67%)
Frame = -3 / +1
Query: 728 EWSSFHPWLPLRSTRKTGPKTRSKMRTAGQIKSSAGTKRTGIL 600
EW HPWLPLRS K G K RS+MR AGQ K+SAG R +L
Sbjct: 403 EWWLCHPWLPLRSAPKIGLKVRSEMRAAGQTKNSAGALR*PVL 531
Score = 41.8 bits (85), Expect(2) = 3e-035
Identities = 20/28 (71%), Positives = 20/28 (71%)
Frame = +2 / -1
Query: 614 SSFLQNSLSDQQFSSLILSLGQSFGLIS 697
S LQNSLSDQQ SS L GQS GLIS
Sbjct: 517 SMLLQNSLSDQQLSSRTLPSGQSLGLIS 434
Score = 39.1 bits (79), Expect(3) = 1e-065
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / +2
Query: 736 CSSSGRRFIHGCR*DQPERLA 674
C +SG IHGCR*DQP+RLA
Sbjct: 395 CPASGGCVIHGCR*DQPQRLA 457
>gb|CW261808.1|CW261808 104_729_11229713_148_35203_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229713, DNA
sequence
Length = 677
Score = 122 bits (261), Expect(3) = 1e-064
Identities = 46/59 (77%), Positives = 55/59 (93%)
Frame = -2 / +2
Query: 450 GGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFISARDLLELLKTMYPDD 274
GGPD +R+KLWH+VDVRD ADALLL+YE P+A+GRHICAPH ISARDLL+LLK+MYPD+
Sbjct: 305 GGPDLVRNKLWHVVDVRDLADALLLLYEVPEAAGRHICAPHVISARDLLDLLKSMYPDN 481
Score = 107 bits (229), Expect(3) = 1e-064
Identities = 42/56 (75%), Positives = 49/56 (87%)
Frame = -2 / +2
Query: 615 ENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPTLNTSCQFLVYFLKG 448
++WY VAKI SEEAAL Y +QTGLDVVT+NP +VFGPLLQPT+N S QFL+YFLKG
Sbjct: 53 QSWYPVAKIISEEAALAYGRQTGLDVVTINPGLVFGPLLQPTVNASIQFLIYFLKG 220
Score = 81.7 bits (172), Expect(3) = 7e-032
Identities = 37/57 (64%), Positives = 40/57 (70%)
Frame = +2 / -3
Query: 449 PFRK*TRN*QLVLSVGCRRGPKTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSS 619
P RK* RN L +VGC RGP T GL VTTSSPVC Y+SAASS+ ILAT YQ S
Sbjct: 219 PLRK*MRNWMLAFTVGCSRGPNTNPGLIVTTSSPVCRPYASAASSEMILATGYQLWS 49
Score = 74.4 bits (156), Expect(3) = 1e-027
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = +1 / -2
Query: 448 SFQEVDEELTARVERRLQKRAKDHSWIDRHNIQPGLLRVFKCGLF*RDLGDRIPVL 615
+F+EVDEEL A V RRLQ+ A+ WID H+++PGL V + LF* DLGDR+P L
Sbjct: 220 TFEEVDEELDACVHRRLQQGAEHQPWIDSHHVKPGLPPVCERRLF*DDLGDRVPAL 53
Score = 67.5 bits (141), Expect(3) = 7e-032
Identities = 32/46 (69%), Positives = 34/46 (73%)
Frame = +2 / -3
Query: 314 RALMK*GAQMCLPEACGVSYTSRRASAVSLTSTMCQSLSLIRSGPP 451
RAL+ *GAQMCLP A G S +S ASA S TST CQSL L RSGPP
Sbjct: 441 RALIT*GAQMCLPAASGTS*SSSSASARSRTSTTCQSLFLTRSGPP 304
Score = 57.4 bits (119), Expect(3) = 1e-064
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -2 / +1
Query: 264 ISKESIYDMEHPAPMTSDKLKKLGWKVRPL 175
+ +ESI D +HPAPMTSDKLK LGW RPL
Sbjct: 586 VGRESICDRDHPAPMTSDKLKNLGWSCRPL 675
Score = 57.0 bits (118), Expect(3) = 1e-027
Identities = 29/58 (50%), Positives = 35/58 (60%)
Frame = +3 / -1
Query: 279 QGTSSSAAPAGHAR**NEERKCACRRLVVSRTQAGEHRQCP*RRRCAKACPSFDQVLL 452
QGT SSA+PAG **+E R+CACR L R A R+ RR A+AC S + LL
Sbjct: 476 QGTCSSASPAGRGH**HEARRCACRLLQAPRRAAAARRRGHGHRRRARACSSPGRGLL 303
Score = 32.7 bits (65), Expect(3) = 7e-032
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / -1
Query: 176 SGLTFHPSFLSLSDVIGAG 232
SG HP F SLS+VIGAG
Sbjct: 674 SGRQLHPRFFSLSEVIGAG 618
Score = 31.8 bits (63), Expect(3) = 1e-027
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1 / -3
Query: 175 QRPDLPSQFLELVGRHWSWVLHVVDALLANE 267
QRP P + L LV H WV+ + AL AN+
Sbjct: 675 QRPAAPPEVL*LVRSHRCWVISITYALPANQ 583
>gb|BE359158.1|BE359158 DG1_39_C02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 548
Score = 245 bits (530), Expect = 9e-064
Identities = 102/156 (65%), Positives = 113/156 (72%)
Frame = -2 / +3
Query: 1101 RTEEAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASEN 922
R + T CVT A IASWLVKLLLSRGYTVHGTVRDLSD KT HLKRLENA+ N
Sbjct: 81 RRRQPMAGGTTVCVTGAGGFIASWLVKLLLSRGYTVHGTVRDLSDEKTNHLKRLENAAGN 260
Query: 921 LKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPEREMLGPAVTGTINALKXXXX 742
L++FKAD+LDYDAMA AV GCQGV HVATPVPS +TDPE +MLGPAVTGT N LK
Sbjct: 261 LRIFKADLLDYDAMAAAVVGCQGVLHVATPVPSENLTDPELQMLGPAVTGTTNVLKAASA 440
Query: 741 XXXXXXXXXXXXXXVEINPKDWPKDKIKDENCWSDK 634
VEI+PKDWP+ KI+DE+CWSDK
Sbjct: 441 ANVQRVVVVSSMVAVEISPKDWPEGKIRDESCWSDK 548
Score = 185 bits (398), Expect = 1e-045
Identities = 91/146 (62%), Positives = 95/146 (65%)
Frame = +2 / -2
Query: 635 LSDQQFSSLILSLGQSFGLISXXXXXXXXXXXXXXXXXXXLSAFMVPVTAGPSISRSGSV 814
LSDQQ SS IL GQS GLIS LS +VPVTAGP+I SGSV
Sbjct: 547 LSDQQLSSRILPSGQSLGLISTATMDDTTTTRWTFAAEAALSTLVVPVTAGPNICSSGSV 368
Query: 815 IFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTVPW 994
F EGTGVAT +TPWHP TA A+AS*S SALK LRF AFS RFR V SLRSRTVP
Sbjct: 367 RFSEGTGVATWRTPWHPTTAAAMAS*SSRSALKILRFPAAFSRRFRWFVFSSLRSRTVPC 188
Query: 995 TV*PRERRSLTSHEAMXXXAXVTHAV 1072
TV*PRE RS TSHEAM A VTH V
Sbjct: 187 TV*PRESRSFTSHEAMNPPAPVTHTV 110
Score = 184 bits (397), Expect = 2e-045
Identities = 88/153 (57%), Positives = 104/153 (67%)
Frame = +1 / -1
Query: 634 FI*PAVLIFDLVFGPVFRVDLNGNHG*NDDHSTSICSRRSLECVYGAGNSRTQHLSLWIG 813
F+*PA LI DL F P+F DLNGNHG*++ HS I R SLE + +SRTQHL LW+
Sbjct: 548 FV*PAALISDLTFRPIFGADLNGNHG*HNHHSLDIRGRGSLEHISCTSDSRTQHL*LWVS 369
Query: 814 DLP*RNRSGDMKDSLAPCDCTRHSVVVKDISLEKLEVFGSIL*PLQMSGFIVTEVADGAV 993
+ *R+ SG M++SLAP D + H VVV+ ISLE EV GSIL LQM +VTEVADGAV
Sbjct: 368 QVL*RHWSGHMENSLAPDDRSCHGVVVQQISLENPEVSGSILQALQMVRLLVTEVADGAV 189
Query: 994 DGVATGEEELDEPRGDVXXGXRHARRLRAPGGL 1092
GVA GE+EL EPRGD G HA R + GL
Sbjct: 188 HGVAAGEQELHEPRGDEPAGAGHAHRCTSGHGL 90
Score = 132 bits (282), Expect = 1e-029
Identities = 57/100 (57%), Positives = 69/100 (69%)
Frame = -1 / +2
Query: 973 Q*Q*NRSSEAVRECFRKPQAFQG*CP*LRRYGGCSRRVPGSLSCRHSCSFREDHRSRARD 794
Q*+ + SEA EC RKPQ FQG* LRR+G C RRVPGS C HS +FRE RA +
Sbjct: 209 Q*REDEPSEAPGECCRKPQDFQG*SAGLRRHGSCGRRVPGSSPCGHSSAFREPD*PRATN 388
Query: 793 AGSCCYRHHKRTQGCVCCKCSSSGRRFIHGCR*DQPERLA 674
GSCC+ ++ QGC+C +C +SG IHGCR*DQP+RLA
Sbjct: 389 VGSCCHWYN*CAQGCLCRECPASGGCVIHGCR*DQPQRLA 508
Score = 117 bits (251), Expect = 3e-025
Identities = 59/105 (56%), Positives = 67/105 (63%)
Frame = -3 / +1
Query: 953 I*SG*RMLPKTSSFSRLMSLTTTLWRVQSQGARESFMSPLLFLQGRSPIQSERCWVLLLP 774
I*S RMLP+TS FSRL+ TTT W+++S GARE M PL LQ QS +CWVLL
Sbjct: 229 I*SAWRMLPETSGFSRLICWTTTPWQLRSSGAREFSMWPLQCLQRT*LTQSYKCWVLLSL 408
Query: 773 AP*THSRLRLLQMLVEWSSFHPWLPLRSTRKTGPKTRSKMRTAGQ 639
SRL L +M EW HPWLPLRS K G K RS+MR AGQ
Sbjct: 409 VQLMCSRLPLPRMSSEWWLCHPWLPLRSAPKIGLKVRSEMRAAGQ 543
Score = 106 bits (227), Expect = 5e-022
Identities = 53/93 (56%), Positives = 61/93 (65%)
Frame = +3 / -3
Query: 675 ASLSG*SQRQPWMKRRPLDEHLQQTQP*VRLWCR*QQDPASLALDR*SSLKEQEWRHERL 854
A+L G*SQRQPWM + PL H +Q QP* +*QQDP +AL + SLK EW H L
Sbjct: 507 ANLWG*SQRQPWMTQPPLAGHSRQRQP*AH*LYQ*QQDPTFVALGQSGSLKALEWPHGEL 328
Query: 855 PGTLRLHPP*RRSQGHQP*KA*GFRKHSLTASD 953
PGT R P RRS QP*K+*GFR+HS ASD
Sbjct: 327 PGTRRPQLPWRRSPADQP*KS*GFRQHSPGASD 229
>gb|CN132257.1|CN132257 OX1_5_C03.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_5_C03_A002 3', mRNA sequence
Length = 673
Score = 205 bits (442), Expect(2) = 1e-063
Identities = 79/134 (58%), Positives = 101/134 (75%)
Frame = -2 / +2
Query: 678 WPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLL 499
WP +IKDE+CWSDK FC ENWY+ AK +EE ALEY ++ GL+VVTV P +V GPLL
Sbjct: 17 WPHGRIKDESCWSDKNFCMKNENWYTAAKTIAEETALEYGEKNGLNVVTVCPCIVLGPLL 196
Query: 498 QPTLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFIS 319
QP +NT+ + L+Y +KGGP M++ W+IVDVRD ADALLLVYE +SGR+ICAP IS
Sbjct: 197 QPLINTTSELLIYIIKGGPRLMKNLPWNIVDVRDVADALLLVYEKVGSSGRYICAPDRIS 376
Query: 318 ARDLLELLKTMYPD 277
D+++LLK YP+
Sbjct: 377 TNDIVKLLKKSYPN 418
Score = 130 bits (279), Expect(2) = 3e-035
Identities = 67/120 (55%), Positives = 76/120 (63%)
Frame = +2 / -2
Query: 320 LMK*GAQMCLPEACGVSYTSRRASAVSLTSTMCQSLSLIRSGPPFRK*TRN*QLVLSVGC 499
L++ GAQM LP+ SYT +ASA S TSTM Q I GPPF * R+ +VL GC
Sbjct: 375 LIRSGAQMYLPDDPTFSYTKSKASATSRTSTMFQGRFFISLGPPFIM*MRSSLVVLIRGC 196
Query: 500 RRGPKTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSSLILSLGQ 679
R GPKT G TVTT SP YS+A SS +LA YQFS F+Q LSDQQ SSLIL GQ
Sbjct: 195 RSGPKTIQGQTVTTFSPFFSPYSNAVSSAIVLAAVYQFSFFMQKFLSDQQLSSLILPWGQ 16
Score = 60.6 bits (126), Expect(2) = 1e-063
Identities = 23/56 (41%), Positives = 39/56 (69%)
Frame = -2 / +2
Query: 276 DYPFISKESIYDMEHPAPMTSDKLKKLGWKVRPLKEPIAETVEFCQHAGFFEDVEG 109
+Y +++ E+ +P+TS+KLK LGWK R ++E + ++VE+ + AGF +DVEG
Sbjct: 416 NYNYVNCENKDYESEVSPVTSEKLKSLGWKPRKMEETLLDSVEYFEKAGFLQDVEG 583
Score = 40.0 bits (81), Expect(2) = 3e-035
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +2 / -2
Query: 110 PSTSSKNPACWQNSTVSAMGSFSGLTFHPSFLSLSDVIG 226
PSTS KNPA + ST+S S L F P LS SDV G
Sbjct: 582 PSTSCKNPAFSKYSTLSNKVSSIFLGFQPRLLSFSDVTG 466
>gb|CN132335.1|CN132335 OX1_5_C03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_5_C03_A002 5', mRNA sequence
Length = 626
Score = 136 bits (291), Expect(3) = 3e-063
Identities = 57/79 (72%), Positives = 64/79 (81%)
Frame = -2 / +1
Query: 1065 CVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYD 886
CVT +ASWLVKLLLSRGY VH TVRD SD K AHL+RL+ A E+L LFKADVLD D
Sbjct: 64 CVTGGGGYVASWLVKLLLSRGYAVHATVRDPSDPKNAHLRRLDGAPESLLLFKADVLDRD 243
Query: 885 AMAGAVAGCQGVFHVATPV 829
A+A AVAGC+GVFHVA+PV
Sbjct: 244 ALAAAVAGCEGVFHVASPV 300
Score = 102 bits (217), Expect(3) = 3e-063
Identities = 37/60 (61%), Positives = 45/60 (75%)
Frame = -2 / +3
Query: 678 WPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLL 499
WP +IKDE+CWSDK FC ENWY+ AK +EE ALEY ++ GL+VVTV P +V GPLL
Sbjct: 447 WPHGRIKDESCWSDKNFCMKNENWYTAAKTIAEETALEYGEKNGLNVVTVCPCIVLGPLL 626
Score = 89.0 bits (188), Expect(3) = 1e-040
Identities = 50/79 (63%), Positives = 52/79 (65%)
Frame = +2 / -1
Query: 830 TGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTVPWTV*PR 1009
TG AT KTP HPATA A AS S TSAL + S A S+R R A L SL SRTV T *PR
Sbjct: 299 TGEATWKTPSHPATAAARASRSSTSALNRSKLSGAPSSRRRCAFLGSLGSRTVACTA*PR 120
Query: 1010 ERRSLTSHEAMXXXAXVTH 1066
ERRSLTSHEA VTH
Sbjct: 119 ERRSLTSHEATYPPPPVTH 63
Score = 77.1 bits (162), Expect(3) = 1e-040
Identities = 37/60 (61%), Positives = 40/60 (66%)
Frame = +2 / -2
Query: 500 RRGPKTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSSLILSLGQ 679
R GPKT G TVTT SP YS+A SS +LA YQFS F+Q LSDQQ SSLIL GQ
Sbjct: 625 RSGPKTIQGQTVTTFSPFFSPYSNAVSSAIVLAAVYQFSFFMQKFLSDQQLSSLILPWGQ 446
Score = 72.5 bits (152), Expect(3) = 1e-024
Identities = 34/73 (46%), Positives = 45/73 (61%)
Frame = +1 / -3
Query: 826 RNRSGDMKDSLAPCDCTRHSVVVKDISLEKLEVFGSIL*PLQMSGFIVTEVADGAVDGVA 1005
++R GD++D LAP D R V V+ + LE+ + + P Q+ +T VAD V GVA
Sbjct: 303 QDRGGDVEDPLAPGDRGRQGVAVEHVGLEQEQALRGPVQPPQVRVLGITRVADSGVHGVA 124
Query: 1006 TGEEELDEPRGDV 1044
GEEELDEP GDV
Sbjct: 123 AGEEELDEP*GDV 85
Score = 53.3 bits (110), Expect(3) = 1e-024
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +1 / -1
Query: 535 HNIQPGLLRVFKCGLF*RDLGDRIPVLFVPAELFI*PAVLIFDLVFGP 678
+NI LL + +C LF LG +PVL + AE+F+*PA LIFD GP
Sbjct: 590 NNI*SILLSILQCCLFSNCLGSSVPVLILHAEVFV*PAALIFDSTMGP 447
Score = 44.6 bits (91), Expect(3) = 3e-063
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = -1 / +2
Query: 829 SFREDHRSRARDAGSCCYRHHKRTQGCVCCKCSSSGRRFIHGC 701
S R+ RS R SCC RH +R+ G + CS S R FIH C
Sbjct: 299 SCRQGPRS*VRGIVSCCQRHSERSSGLLGK*CSESCRGFIHSC 427
Score = 40.9 bits (83), Expect(3) = 1e-040
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +3 / -3
Query: 684 SG*SQRQPWMKRRPLDEHLQQTQP*VRLWCR*QQDPASLALDR*SSLKEQ 833
SG +++Q WMK R L EH ++P R C *QQ+ L DR L+++
Sbjct: 444 SGYNEQQLWMKPRQLSEHYLPSKPEERSECL*QQETIPLTQDRGPCLQDR 295
Score = 26.7 bits (52), Expect(3) = 1e-024
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2 / -2
Query: 764 FMVPVTAGPSISRSGSVIFPEGTG 835
F VP+TAG + S SGS G G
Sbjct: 364 FRVPLTAGDNTSDSGSRTLSAGQG 293
>gb|CN125662.1|CN125662 RHOH1_12_B03.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_12_B03_A002 5', mRNA sequence
Length = 688
Score = 108 bits (230), Expect(4) = 5e-056
Identities = 39/72 (54%), Positives = 53/72 (73%)
Frame = -2 / +3
Query: 678 WPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLL 499
WP+D++ DE CWSD EFCR +NWY ++K +E A +YAK+TGLDVV+V P++V GPL
Sbjct: 465 WPQDEVMDEACWSDVEFCRTNQNWYCLSKTLAETEAFDYAKRTGLDVVSVCPSLVIGPLR 644
Query: 498 QPTLNTSCQFLV 463
Q T+N S +V
Sbjct: 645 QSTVNASSSIIV 680
Score = 99.6 bits (211), Expect(4) = 5e-056
Identities = 40/67 (59%), Positives = 50/67 (74%)
Frame = -2 / +3
Query: 1023 KLLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFH 844
+LL Y VHGTVRD D K AHL ++ A+ L+LF+AD+LDY ++A AVAGC GVFH
Sbjct: 120 RLLAGGRYVVHGTVRDPGDAKNAHLAAMDGAAARLRLFRADLLDYGSVAAAVAGCDGVFH 299
Query: 843 VATPVPS 823
VA+PVPS
Sbjct: 300 VASPVPS 320
Score = 73.5 bits (154), Expect(4) = 2e-030
Identities = 36/67 (53%), Positives = 43/67 (64%)
Frame = +2 / -1
Query: 479 LVLSVGCRRGPKTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSS 658
L +V CR+GP T G T TTSSPV A S+A+ S +L +YQF LQNS SDQQ SS
Sbjct: 664 LAFTVDCRKGPITRDGQTDTTSSPVLLA*SNASVSASVLERQYQF*LVLQNSTSDQQASS 485
Query: 659 LILSLGQ 679
+ S GQ
Sbjct: 484 MTSSWGQ 464
Score = 51.5 bits (106), Expect(4) = 2e-030
Identities = 31/57 (54%), Positives = 32/57 (56%)
Frame = +2 / -1
Query: 827 GTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTVPWT 997
GTG AT KTP PATA A *S SAL + A S R A L S SRTVPWT
Sbjct: 316 GTGDATWKTPSQPATAAATLP*SSKSALNRRSRAAAPSIAARCAFLASPGSRTVPWT 146
Score = 38.6 bits (78), Expect(4) = 5e-056
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -2 / +3
Query: 816 ITDPEREMLGPAVTGTINALKXXXXXXXXXXXXXXXXXXVEINP 685
I DPE E+L PAVTGT+N LK V +NP
Sbjct: 330 IGDPEVELLAPAVTGTMNVLKASSEAKVKGVVVVSSVAAVMVNP 461
Score = 32.7 bits (65), Expect(4) = 2e-030
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +1 / -3
Query: 1003 ATGEEELDEPRGDVXXGXRHARRLRAPGGLLC 1098
A GEE LDEPRG HA R P C
Sbjct: 137 AAGEEALDEPRGHEASRAGHAHRRPRPRPPCC 42
Score = 32.2 bits (64), Expect(4) = 2e-030
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = +2 / -1
Query: 755 LSAFMVPVTAGPSISRSGSVI 817
L FMVPVTAG S S SGS I
Sbjct: 391 LRTFMVPVTAGASSSTSGSPI 329
Score = 30.4 bits (60), Expect(4) = 5e-056
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2 / +3
Query: 1065 CVTXAXXXIASWLVKLLLSRG 1003
CVT A +ASWLV+ LL+ G
Sbjct: 75 CVTGAGGFVASWLVERLLAGG 137
>gb|CD206423.1|CD206423 HS1_22_G03.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_22_G03_A012 5', mRNA sequence
Length = 511
Score = 210 bits (454), Expect = 3e-053
Identities = 91/141 (64%), Positives = 99/141 (70%)
Frame = -2 / +1
Query: 1101 RTEEAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASEN 922
R + T CVT A IASWLVKLLLSRGYTVHGTVRDLSD KT HLKRLENA+ N
Sbjct: 88 RRRQPMAGGTTVCVTGAGGFIASWLVKLLLSRGYTVHGTVRDLSDEKTNHLKRLENAAGN 267
Query: 921 LKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPEREMLGPAVTGTINALKXXXX 742
L++FKAD+LDYDAMA AV GCQGV HVATPVPS +TDPE +MLGPAVTGT N LK
Sbjct: 268 LRIFKADLLDYDAMAAAVVGCQGVLHVATPVPSENLTDPELQMLGPAVTGTTNVLKAASA 447
Query: 741 XXXXXXXXXXXXXXVEINPKD 679
VEI+PKD
Sbjct: 448 ANVQRVVVVSSMVAVEISPKD 510
Score = 164 bits (352), Expect = 3e-039
Identities = 80/131 (61%), Positives = 84/131 (64%)
Frame = +2 / -3
Query: 680 SFGLISXXXXXXXXXXXXXXXXXXXLSAFMVPVTAGPSISRSGSVIFPEGTGVAT*KTPW 859
S GLIS LS +VPVTAGP+I SGSV F EGTGVAT +TPW
Sbjct: 509 SLGLISTATMDDTTTTRWTFAAEAALSTLVVPVTAGPNICSSGSVRFSEGTGVATWRTPW 330
Query: 860 HPATAPAIAS*SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTVPWTV*PRERRSLTSHEA 1039
HP TA A+AS*S SALK LRF AFS RFR V SLRSRTVP TV*PRE RS TSHEA
Sbjct: 329 HPTTAAAMAS*SSRSALKILRFPAAFSRRFRWFVFSSLRSRTVPCTV*PRESRSFTSHEA 150
Query: 1040 MXXXAXVTHAV 1072
M A VTH V
Sbjct: 149 MNPPAPVTHTV 117
Score = 162 bits (349), Expect = 8e-039
Identities = 78/138 (56%), Positives = 93/138 (67%)
Frame = +1 / -2
Query: 679 VFRVDLNGNHG*NDDHSTSICSRRSLECVYGAGNSRTQHLSLWIGDLP*RNRSGDMKDSL 858
+F DLNGNHG*++ HS I R SLE + +SRTQHL LW+ + *R+ SG M++SL
Sbjct: 510 IFGADLNGNHG*HNHHSLDIRGRGSLEHISCTSDSRTQHL*LWVSQVL*RHWSGHMENSL 331
Query: 859 APCDCTRHSVVVKDISLEKLEVFGSIL*PLQMSGFIVTEVADGAVDGVATGEEELDEPRG 1038
AP D + H VVV+ ISLE EV GSIL LQM +VTEVADGAV GVA GE+EL EPRG
Sbjct: 330 APDDRSCHGVVVQQISLENPEVSGSILQALQMVRLLVTEVADGAVHGVAAGEQELHEPRG 151
Query: 1039 DVXXGXRHARRLRAPGGL 1092
D G HA R + GL
Sbjct: 150 DEPAGAGHAHRCTSGHGL 97
Score = 128 bits (274), Expect = 2e-028
Identities = 55/98 (56%), Positives = 67/98 (68%)
Frame = -1 / +3
Query: 973 Q*Q*NRSSEAVRECFRKPQAFQG*CP*LRRYGGCSRRVPGSLSCRHSCSFREDHRSRARD 794
Q*+ + SEA EC RKPQ FQG* LRR+G C RRVPGS C HS +FRE RA +
Sbjct: 216 Q*REDEPSEAPGECCRKPQDFQG*SAGLRRHGSCGRRVPGSSPCGHSSAFREPD*PRATN 395
Query: 793 AGSCCYRHHKRTQGCVCCKCSSSGRRFIHGCR*DQPER 680
GSCC+ ++ QGC+C +C +SG IHGCR*DQP+R
Sbjct: 396 VGSCCHWYN*CAQGCLCRECPASGGCVIHGCR*DQPQR 509
Score = 105 bits (223), Expect = 2e-021
Identities = 52/92 (56%), Positives = 60/92 (65%)
Frame = +3 / -1
Query: 678 SLSG*SQRQPWMKRRPLDEHLQQTQP*VRLWCR*QQDPASLALDR*SSLKEQEWRHERLP 857
+L G*SQRQPWM + PL H +Q QP* +*QQDP +AL + SLK EW H LP
Sbjct: 511 NLWG*SQRQPWMTQPPLAGHSRQRQP*AH*LYQ*QQDPTFVALGQSGSLKALEWPHGELP 332
Query: 858 GTLRLHPP*RRSQGHQP*KA*GFRKHSLTASD 953
GT R P RRS QP*K+*GFR+HS ASD
Sbjct: 331 GTRRPQLPWRRSPADQP*KS*GFRQHSPGASD 236
>gb|CN124163.1|CN124163 RHOH1_3_B09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_3_B09_A002 3', mRNA sequence
Length = 695
Score = 184 bits (396), Expect(2) = 4e-051
Identities = 71/133 (53%), Positives = 97/133 (72%)
Frame = -2 / +1
Query: 678 WPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLL 499
WPK K DE+CWSD+++CR E+WY ++K SE A YA +TGLDVVT+ PA+VFGPL+
Sbjct: 19 WPKGKAFDEDCWSDEDYCRKNEDWYYLSKTLSEREAFAYAAKTGLDVVTICPALVFGPLM 198
Query: 498 QPTLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFIS 319
Q LN S + L+ + KG + + ++L +IVDVRD ADALLL YE P+ASGR+IC+ I
Sbjct: 199 QSILNASSKILLNYFKGDRETIENRLRNIVDVRDVADALLLAYEKPEASGRYICSSQPIK 378
Query: 318 ARDLLELLKTMYP 280
D++ +LKT+YP
Sbjct: 379 VSDMINILKTLYP 417
Score = 39.6 bits (80), Expect(2) = 4e-051
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = -2 / +1
Query: 255 ESIYDMEHPAPMTSDKLKKLGWKVRPLKEPIAETVE 148
++ +M+ + +S+KL+KLGW RP++E + E+VE
Sbjct: 433 KNFVEMDDNSIYSSEKLQKLGWTFRPIEETLRESVE 540
>gb|BE363053.1|BE363053 DG1_9_D02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 509
Score = 203 bits (437), Expect = 6e-051
Identities = 85/116 (73%), Positives = 92/116 (79%)
Frame = -2 / +2
Query: 1101 RTEEAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASEN 922
R + T CVT A IASWLVKLLLSRGYTVHGTVRDLSD KT HLKRLENA+ N
Sbjct: 122 RRRQPMAGGTTVCVTGAGGFIASWLVKLLLSRGYTVHGTVRDLSDEKTNHLKRLENAAGN 301
Query: 921 LKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPEREMLGPAVTGTINALK 754
L++FKAD+LDYDAMA AV GCQGV HVATPVPS +TDPE +MLGPAVTGT N LK
Sbjct: 302 LRIFKADLLDYDAMAAAVVGCQGVLHVATPVPSENLTDPELQMLGPAVTGTTNVLK 469
Score = 157 bits (338), Expect = 3e-037
Identities = 75/106 (70%), Positives = 79/106 (74%)
Frame = +2 / -3
Query: 755 LSAFMVPVTAGPSISRSGSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEA 934
LS +VPVTAGP+I SGSV F EGTGVAT +TPWHP TA A+AS*S SALK LRF A
Sbjct: 468 LSTLVVPVTAGPNICSSGSVRFSEGTGVATWRTPWHPTTAAAMAS*SSRSALKILRFPAA 289
Query: 935 FSNRFR*AVLLSLRSRTVPWTV*PRERRSLTSHEAMXXXAXVTHAV 1072
FS RFR V SLRSRTVP TV*PRE RS TSHEAM A VTH V
Sbjct: 288 FSRRFRWFVFSSLRSRTVPCTV*PRESRSFTSHEAMNPPAPVTHTV 151
Score = 139 bits (299), Expect = 6e-032
Identities = 69/126 (54%), Positives = 83/126 (65%)
Frame = +1 / -2
Query: 715 NDDHSTSICSRRSLECVYGAGNSRTQHLSLWIGDLP*RNRSGDMKDSLAPCDCTRHSVVV 894
++ HS I R SLE + +SRTQHL LW+ + *R+ SG M++SLAP D + H VVV
Sbjct: 508 HNHHSLDIRGRGSLEHISCTSDSRTQHL*LWVSQVL*RHWSGHMENSLAPDDRSCHGVVV 329
Query: 895 KDISLEKLEVFGSIL*PLQMSGFIVTEVADGAVDGVATGEEELDEPRGDVXXGXRHARRL 1074
+ ISLE EV GSIL LQM +VTEVADGAV GVA GE+EL EPRGD G HA R
Sbjct: 328 QQISLENPEVSGSILQALQMVRLLVTEVADGAVHGVAAGEQELHEPRGDEPAGAGHAHRC 149
Query: 1075 RAPGGL 1092
+ GL
Sbjct: 148 TSGHGL 131
Score = 104 bits (222), Expect = 3e-021
Identities = 45/84 (53%), Positives = 56/84 (66%)
Frame = -1 / +1
Query: 973 Q*Q*NRSSEAVRECFRKPQAFQG*CP*LRRYGGCSRRVPGSLSCRHSCSFREDHRSRARD 794
Q*+ + SEA EC RKPQ FQG* LRR+G C RRVPGS C HS +FRE RA +
Sbjct: 250 Q*REDEPSEAPGECCRKPQDFQG*SAGLRRHGSCGRRVPGSSPCGHSSAFREPD*PRATN 429
Query: 793 AGSCCYRHHKRTQGCVCCKCSSSG 722
GSCC+ ++ QGC+C +C +SG
Sbjct: 430 VGSCCHWYN*CAQGCLCRECPASG 501
>gb|CW403429.1|CW403429 fsbb001f095c10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f095c10, DNA
sequence
Length = 663
Score = 87.7 bits (185), Expect(3) = 9e-029
Identities = 35/70 (50%), Positives = 43/70 (61%)
Frame = -2 / -3
Query: 822 GKITDPEREMLGPAVTGTINALKXXXXXXXXXXXXXXXXXXVEINPKDWPKDKIKDENCW 643
G + + +MLGPAVTGT N LK VEI+PKDWP+ KI+DE+CW
Sbjct: 469 GLTNNVQLQMLGPAVTGTTNVLKAASAANVQRVVVVSSMVAVEISPKDWPEGKIRDESCW 290
Query: 642 SDKEFCRNEE 613
SDKEFCR+ E
Sbjct: 289 SDKEFCRSIE 260
Score = 87.2 bits (184), Expect(3) = 2e-049
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = -2 / -1
Query: 615 ENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPTLNTS 478
++WY VAKI SEEAAL Y +QTGLDVVT+NP +VFGPLLQPT+N S
Sbjct: 138 QSWYPVAKIISEEAALAYGRQTGLDVVTINPGLVFGPLLQPTVNAS 1
Score = 81.7 bits (172), Expect(3) = 3e-041
Identities = 37/66 (56%), Positives = 44/66 (66%)
Frame = +1 / +2
Query: 613 LFVPAELFI*PAVLIFDLVFGPVFRVDLNGNHG*NDDHSTSICSRRSLECVYGAGNSRTQ 792
L PAE F+*PA LI DL F P+F DLNGNHG*++ HS I R SLE + +SRTQ
Sbjct: 260 LNAPAEFFV*PAALISDLTFRPIFGADLNGNHG*HNHHSLDIRGRGSLEHISCTSDSRTQ 439
Query: 793 HLSLWI 810
HL L +
Sbjct: 440 HL*LHV 457
Score = 77.1 bits (162), Expect(3) = 2e-049
Identities = 36/64 (56%), Positives = 40/64 (62%)
Frame = -3 / -1
Query: 803 SERCWVLLLPAP*THSRLRLLQMLVEWSSFHPWLPLRSTRKTGPKTRSKMRTAGQIKSSA 624
S +CWVLL SRL L +M EW HPWLPLRS K G K RS+MR AGQ K+SA
Sbjct: 450 SYKCWVLLSLVQLMCSRLPLPRMSSEWWLCHPWLPLRSAPKIGLKVRSEMRAAGQTKNSA 271
Query: 623 GTKR 612
G R
Sbjct: 270 GALR 259
Score = 72.5 bits (152), Expect(3) = 2e-049
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = -2 / -1
Query: 903 DVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPEREMLGP 784
D+LDYDAMA AV GCQGV HVATPVPS +TDPE + P
Sbjct: 663 DLLDYDAMAAAVVGCQGVLHVATPVPSENLTDPEASLFFP 544
Score = 70.7 bits (148), Expect(3) = 3e-041
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = +2 / +2
Query: 479 LVLSVGCRRGPKTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSS 619
L +VGC RGP T GL VTTSSPVC Y+SAASS+ ILAT YQ S
Sbjct: 2 LAFTVGCSRGPNTNPGLIVTTSSPVCRPYASAASSEMILATGYQLWS 142
Score = 63.8 bits (133), Expect(3) = 1e-026
Identities = 31/61 (50%), Positives = 33/61 (54%)
Frame = +2 / +3
Query: 614 SSFLQNSLSDQQFSSLILSLGQSFGLISXXXXXXXXXXXXXXXXXXXLSAFMVPVTAGPS 793
S LQNSLSDQQ SS IL GQS GLIS LS +VPVTAGP+
Sbjct: 261 SMLLQNSLSDQQLSSRILPSGQSLGLISTATMDDTTTTRWTFAAEAALSTLVVPVTAGPN 440
Query: 794 I 796
I
Sbjct: 441 I 443
Score = 57.4 bits (119), Expect(3) = 1e-026
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +1 / +1
Query: 478 ARVERRLQKRAKDHSWIDRHNIQPGLLRVFKCGLF*RDLGDRIPVL 615
A V RRLQ+ A+ WID H+++PGL V + LF* DLGDR+P L
Sbjct: 1 ACVHRRLQQGAEHQPWIDSHHVKPGLPPVCERRLF*DDLGDRVPAL 138
Score = 56.5 bits (117), Expect(3) = 3e-041
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = +2 / +2
Query: 803 SGSVIFPEGTGVAT*KTPWHPATAPAIAS*S 895
SGSV F EGTGVAT +TPWHP TA A+AS*S
Sbjct: 563 SGSVRFSEGTGVATWRTPWHPTTAAAMAS*S 655
Score = 46.0 bits (94), Expect(3) = 9e-029
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = -1 / -3
Query: 892 LRRYGGCSRRVPGSLSCRHSCSFRE 818
LRR+G C RRVPGS C HS +FRE
Sbjct: 652 LRRHGSCGRRVPGSSPCGHSSAFRE 578
Score = 38.2 bits (77), Expect(3) = 1e-026
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +1 / +1
Query: 802 LWIGDLP*RNRSGDMKDSLAPCDCTRHSVVVKDI 903
LW+ + *R+ SG M++SLAP D + H VV++ I
Sbjct: 562 LWVSQVL*RHWSGHMENSLAPDDRSCHGVVIQQI 663
Score = 37.7 bits (76), Expect(3) = 9e-029
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = -3 / -2
Query: 614 RTGILSPRSRQKRPHLNTRSRPGWML*RSIQLWSLALFC 498
R G SPRS QKR +T +PG * SIQ W A C
Sbjct: 137 RAGTRSPRSSQKRRRSHTGGKPGLTW*LSIQGWCSAPCC 21
>gb|CN135147.1|CN135147 OX1_30_G11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_30_G11_A002 5', mRNA sequence
Length = 773
Score = 123 bits (264), Expect(3) = 2e-048
Identities = 44/78 (56%), Positives = 62/78 (79%)
Frame = -2 / +1
Query: 681 DWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPL 502
+WP+D++KDE+CWSD EFC+ +E+WYSVAK +E+ A EYA+ GL+VV + P VFGPL
Sbjct: 496 NWPQDRLKDESCWSDTEFCKEKEDWYSVAKTLAEQEASEYARNNGLNVVALCPPYVFGPL 675
Query: 501 LQPTLNTSCQFLVYFLKG 448
LQ ++NTS + L+Y +KG
Sbjct: 676 LQSSVNTSSKLLIYVIKG 729
Score = 89.0 bits (188), Expect(3) = 2e-048
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = -2 / +3
Query: 969 DNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPE 802
D K AHLK+L+ A ENL LFKADVLD + + AV GCQGVFH+ATPVP KI P+
Sbjct: 24 DPKNAHLKKLDRAPENLHLFKADVLDCETLTPAVQGCQGVFHLATPVPEDKILHPD 191
Score = 84.9 bits (179), Expect(2) = 1e-023
Identities = 43/77 (55%), Positives = 50/77 (64%)
Frame = +2 / -1
Query: 449 PFRK*TRN*QLVLSVGCRRGPKTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQ 628
PF * R+ LV + C GPKT G + TT SP+ AYS A+ S +LATEYQ S LQ
Sbjct: 728 PFIT*MRSLLLVFTEDCNSGPKT*GGHSATTFSPLLRAYSEASCSARVLATEYQSSFSLQ 549
Query: 629 NSLSDQQFSSLILSLGQ 679
NS+SDQQ SSL LS GQ
Sbjct: 548 NSVSDQQLSSLSLS*GQ 498
Score = 49.6 bits (102), Expect(2) = 1e-023
Identities = 28/50 (56%), Positives = 29/50 (58%)
Frame = +2 / -2
Query: 803 SGSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR 952
SG I GTGVA KTP HP TA S S TSAL RFS A S+ FR
Sbjct: 190 SG*RILSSGTGVARWKTP*HP*TAGVRVSQSSTSALNRCRFSGALSSFFR 41
Score = 25.4 bits (49), Expect(3) = 2e-048
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1 / +3
Query: 802 ARDAGSCCYRHHKRTQGCVCCKCSSSGRRFIHGCR*DQPE 683
AR G CC R+ K +G + + S S + C QPE
Sbjct: 378 ARSTGPCCERYLKCFKGLLNSEGSQSCCDVLQCCCYFQPE 497
>gb|CW168296.1|CW168296 104_577_11154068_148_36493_066 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11154068, DNA
sequence
Length = 667
Score = 107 bits (229), Expect(3) = 2e-046
Identities = 42/56 (75%), Positives = 49/56 (87%)
Frame = -2 / -1
Query: 615 ENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPTLNTSCQFLVYFLKG 448
++WY VAKI SEEAAL Y +QTGLDVVT+NP +VFGPLLQPT+N S QFL+YFLKG
Sbjct: 298 QSWYPVAKIISEEAALAYGRQTGLDVVTINPGLVFGPLLQPTVNASIQFLIYFLKG 131
Score = 87.7 bits (185), Expect(3) = 2e-046
Identities = 35/70 (50%), Positives = 43/70 (61%)
Frame = -2 / -3
Query: 822 GKITDPEREMLGPAVTGTINALKXXXXXXXXXXXXXXXXXXVEINPKDWPKDKIKDENCW 643
G + + +MLGPAVTGT N LK VEI+PKDWP+ KI+DE+CW
Sbjct: 629 GLTNNVQLQMLGPAVTGTTNVLKAASAANVQRVVVVSSMVAVEISPKDWPEGKIRDESCW 450
Query: 642 SDKEFCRNEE 613
SDKEFCR+ E
Sbjct: 449 SDKEFCRSIE 420
Score = 81.7 bits (172), Expect(3) = 1e-036
Identities = 37/66 (56%), Positives = 44/66 (66%)
Frame = +1 / +3
Query: 613 LFVPAELFI*PAVLIFDLVFGPVFRVDLNGNHG*NDDHSTSICSRRSLECVYGAGNSRTQ 792
L PAE F+*PA LI DL F P+F DLNGNHG*++ HS I R SLE + +SRTQ
Sbjct: 420 LNAPAEFFV*PAALISDLTFRPIFGADLNGNHG*HNHHSLDIRGRGSLEHISCTSDSRTQ 599
Query: 793 HLSLWI 810
HL L +
Sbjct: 600 HL*LHV 617
Score = 81.7 bits (172), Expect(3) = 1e-036
Identities = 37/57 (64%), Positives = 40/57 (70%)
Frame = +2 / +3
Query: 449 PFRK*TRN*QLVLSVGCRRGPKTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSS 619
P RK* RN L +VGC RGP T GL VTTSSPVC Y+SAASS+ ILAT YQ S
Sbjct: 132 PLRK*MRNWMLAFTVGCSRGPNTNPGLIVTTSSPVCRPYASAASSEMILATGYQLWS 302
Score = 77.1 bits (162), Expect(2) = 2e-021
Identities = 36/64 (56%), Positives = 40/64 (62%)
Frame = -3 / -1
Query: 803 SERCWVLLLPAP*THSRLRLLQMLVEWSSFHPWLPLRSTRKTGPKTRSKMRTAGQIKSSA 624
S +CWVLL SRL L +M EW HPWLPLRS K G K RS+MR AGQ K+SA
Sbjct: 610 SYKCWVLLSLVQLMCSRLPLPRMSSEWWLCHPWLPLRSAPKIGLKVRSEMRAAGQTKNSA 431
Query: 623 GTKR 612
G R
Sbjct: 430 GALR 419
Score = 74.4 bits (156), Expect(2) = 1e-024
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = +1 / +2
Query: 448 SFQEVDEELTARVERRLQKRAKDHSWIDRHNIQPGLLRVFKCGLF*RDLGDRIPVL 615
+F+EVDEEL A V RRLQ+ A+ WID H+++PGL V + LF* DLGDR+P L
Sbjct: 131 TFEEVDEELDACVHRRLQQGAEHQPWIDSHHVKPGLPPVCERRLF*DDLGDRVPAL 298
Score = 63.8 bits (133), Expect(2) = 1e-024
Identities = 31/61 (50%), Positives = 33/61 (54%)
Frame = +2 / +1
Query: 614 SSFLQNSLSDQQFSSLILSLGQSFGLISXXXXXXXXXXXXXXXXXXXLSAFMVPVTAGPS 793
S LQNSLSDQQ SS IL GQS GLIS LS +VPVTAGP+
Sbjct: 421 SMLLQNSLSDQQLSSRILPSGQSLGLISTATMDDTTTTRWTFAAEAALSTLVVPVTAGPN 600
Query: 794 I 796
I
Sbjct: 601 I 603
Score = 50.1 bits (103), Expect(2) = 2e-021
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = -1 / -3
Query: 598 RQDLVRRGRT*IREADRAGCCDGQSSCGLWPSSAADAQHELSVPRLLPER 449
RQD +RRG IR A+RA D QS G+ P +AAD + + VP LLP+R
Sbjct: 281 RQDHLRRGGARIRAANRA*RGDYQSRVGVRPPAAADGERKHPVPHLLPQR 132
Score = 35.4 bits (71), Expect(3) = 2e-046
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -2 / -1
Query: 450 GGPDRMRDKLWHIVD 406
GGPD +R+KLWH+VD
Sbjct: 46 GGPDLVRNKLWHVVD 2
Score = 30.4 bits (60), Expect(3) = 1e-036
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +2 / +3
Query: 407 STMCQSLSLIRSGPP 451
ST CQSL L RSGPP
Sbjct: 3 STTCQSLFLTRSGPP 47
>gb|CN152656.1|CN152656 WOUND1_83_A06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_83_A06_A002 5', mRNA sequence
Length = 857
Score = 107 bits (229), Expect(3) = 3e-044
Identities = 43/123 (34%), Positives = 68/123 (55%)
Frame = -2 / +1
Query: 816 ITDPEREMLGPAVTGTINALKXXXXXXXXXXXXXXXXXXVEINPKDWPKDKIKDENCWSD 637
+ DP+ E+L PAV GT+N L V N K + DE ++D
Sbjct: 394 VKDPKAELLDPAVKGTLNVLGSCKKASITKVVITSSMAAVSYNEKPRTPEVTVDETWFTD 573
Query: 636 KEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPTLNTSCQFLVYF 457
+ C + WY ++K +E+AA ++++ G ++VT+NPA+V GPLLQPTLNTS + ++
Sbjct: 574 PQICEKTQQWYVLSKTLAEQAAWKFSRDNGFEIVTINPAMVIGPLLQPTLNTSAEAILKL 753
Query: 456 LKG 448
+ G
Sbjct: 754 ING 762
Score = 60.6 bits (126), Expect(3) = 3e-044
Identities = 24/41 (58%), Positives = 29/41 (70%)
Frame = -2 / +1
Query: 1083 GSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNK 961
G+ + CVT A IASW+V+LLL RGYTV TVRD +D K
Sbjct: 127 GAGKVVCVTGASGYIASWIVRLLLDRGYTVRATVRDTADPK 249
Score = 51.0 bits (105), Expect(3) = 3e-044
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = -2 / +1
Query: 963 KTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATP 832
KT HL L+ A + L LFKA +L+ + AV GC VFH A+P
Sbjct: 250 KTLHLTALDGAKDRLHLFKASLLEEGSFDAAVHGCDTVFHTASP 381
>gb|CN124236.1|CN124236 RHOH1_3_B09.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_3_B09_A002 5', mRNA sequence
Length = 566
Score = 130 bits (278), Expect(3) = 7e-044
Identities = 54/89 (60%), Positives = 67/89 (75%)
Frame = -2 / +1
Query: 1020 LLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHV 841
LL YTV GTVRD +K AHLK LE A E L+L K D+LDY ++A A+AGC+GVFHV
Sbjct: 172 LLSRGQYTVRGTVRDPGASKNAHLKALEGAMERLQLLKVDLLDYSSVASAIAGCEGVFHV 351
Query: 840 ATPVPSGKITDPEREMLGPAVTGTINALK 754
A+PVPSG+ ++PE E++GPAV GT N LK
Sbjct: 352 ASPVPSGRSSNPEVEVIGPAVLGTTNVLK 438
Score = 76.7 bits (161), Expect(3) = 8e-021
Identities = 43/81 (53%), Positives = 49/81 (60%)
Frame = +2 / -1
Query: 758 SAFMVPVTAGPSISRSGSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAF 937
+ +VP TAGP S SG PEGTG+AT KTP PA A A *S S L+S S A
Sbjct: 434 NTLVVPNTAGPMTSTSGLEDRPEGTGLATWKTPSQPAIADATLL*SNKSTLRSCNLSIAP 255
Query: 938 SNRFR*AVLLSLRSRTVPWTV 1000
S+ R*A LL+ SRTVP TV
Sbjct: 254 SSALR*AFLLAPGSRTVPRTV 192
Score = 48.3 bits (99), Expect(3) = 7e-044
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -2 / +1
Query: 1107 TGRTEEAAGSAETACVTXAXXXIASWLVKLLLSRG 1003
+ + +E A +A++ CVT A IASWLVKLLLSRG
Sbjct: 82 SAKPKEMAAAAKSVCVTGAGGFIASWLVKLLLSRG 186
Score = 40.0 bits (81), Expect(3) = 8e-021
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +2 / -1
Query: 1004 PRERRSLTSHEAMXXXAXVTHAVSALPAAS 1093
PRERRS TSH+AM A VTH + A A S
Sbjct: 185 PRERRSFTSHDAMKPPAPVTHTLFAAAAIS 96
Score = 39.6 bits (80), Expect(3) = 7e-044
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -2 / +2
Query: 678 WPKDKIKDENCWSDKEFC 625
WPK K DE+CWSD+++C
Sbjct: 512 WPKGKAFDEDCWSDEDYC 565
Score = 23.1 bits (44), Expect(3) = 8e-021
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +2 / -3
Query: 626 QNSLSDQQFSSLILSLGQ 679
Q S SDQQ SS L LGQ
Sbjct: 564 Q*SSSDQQSSSKALPLGQ 511
>gb|CN145669.1|CN145669 WOUND1_34_B03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_34_B03_A002 5', mRNA sequence
Length = 737
Score = 83.5 bits (176), Expect(3) = 1e-043
Identities = 31/77 (40%), Positives = 50/77 (64%)
Frame = -2 / +2
Query: 678 WPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLL 499
WP DK+ DE+ W+D E + + WY+V+K +E+AA ++A++ GL+ V +NPA+V GP L
Sbjct: 479 WPADKVVDEDSWADIEQLKKLQLWYNVSKTLAEKAAWDFAEKEGLEPVVLNPALVLGPTL 658
Query: 498 QPTLNTSCQFLVYFLKG 448
P + S Q + + G
Sbjct: 659 TPNIMASLQMFLQIMGG 709
Score = 75.3 bits (158), Expect(3) = 1e-043
Identities = 29/72 (40%), Positives = 51/72 (70%)
Frame = -2 / +2
Query: 969 DNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPEREML 790
+++T HL+ ++ A+ L+LF+ D+L+ ++ AV G +GVFHVA+PV + DPE E++
Sbjct: 191 ESETKHLQAMDGANSRLRLFQMDLLEPASIRPAVEGARGVFHVASPVILHRAQDPENELV 370
Query: 789 GPAVTGTINALK 754
PA+ GT++ L+
Sbjct: 371 EPALKGTLSVLR 406
Score = 58.3 bits (121), Expect(3) = 1e-043
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = -2 / +2
Query: 1092 EAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSD 967
+ G + CVT I SWLV+LLL RGYTVH TV++L D
Sbjct: 65 DGGGGSSLVCVTGGSGFIGSWLVRLLLGRGYTVHATVKNLQD 190
Score = 58.3 bits (121), Expect(3) = 8e-021
Identities = 31/69 (44%), Positives = 40/69 (57%)
Frame = +2 / -3
Query: 476 QLVLSVGCRRGPKTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFS 655
+L + +G + GP T AGL+ T S P A S AA S +L T YQ SFL S+S Q+ S
Sbjct: 681 RLAMILGVKVGPNTRAGLSTTGSKPSFSAKSHAAFSASVLETLYQS*SFLSCSMSAQESS 502
Query: 656 SLILSLGQS 682
S LS G +
Sbjct: 501 STTLSAGHA 475
Score = 46.0 bits (94), Expect(3) = 8e-021
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = +1 / -2
Query: 964 IVTEVADGAVDGVATGEEELDEPRGDVXXGXRHA 1065
+V EV DG VDGVA E+E DEP D RHA
Sbjct: 193 LVLEVLDGGVDGVAATEKEADEPGADEAAAARHA 92
Score = 35.4 bits (71), Expect(3) = 8e-021
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +2 / -3
Query: 770 VPVTAGPSISRSGSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKS 916
VP AG + S SGS TG AT KTP P+TA + + SR S S
Sbjct: 390 VPFNAGSTNSFSGSCARCRMTGEATWKTPRAPSTAGRMEAGSRRSIWNS 244
>gb|BE357345.1|BE357345 DG1_148_D02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 719
Score = 169 bits (364), Expect(2) = 2e-043
Identities = 67/118 (56%), Positives = 92/118 (77%)
Frame = -2 / +1
Query: 630 FCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPTLNTSCQFLVYFLK 451
FC+ E+WY VAK+ +E+ ALEYA++ GL+VVTV P + GPLL+P +N S +FL+Y +K
Sbjct: 7 FCKMNEDWYMVAKVIAEKTALEYAEKNGLNVVTVCPTMALGPLLRPMVNVSHEFLLYIIK 186
Query: 450 GGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFISARDLLELLKTMYPD 277
GGP MR+ WHIVDVRD ADALLLVYE +++ R+ICAP++ISA DL+ +LK +P+
Sbjct: 187 GGPTVMRNIPWHIVDVRDVADALLLVYEKEKSARRYICAPNYISAIDLVNMLKKAHPN 360
Score = 100 bits (213), Expect(2) = 1e-021
Identities = 55/104 (52%), Positives = 60/104 (57%)
Frame = +2 / -1
Query: 317 ALMK*GAQMCLPEACGVSYTSRRASAVSLTSTMCQSLSLIRSGPPFRK*TRN*QLVLSVG 496
ALM GAQM L SYT +ASA S TSTMCQ + LI GPP +RN L L++G
Sbjct: 320 ALM*FGAQMYLLADFSFSYTRSKASATSRTSTMCQGMFLITVGPPLIMYSRNSWLTLTIG 141
Query: 497 CRRGPKTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQ 628
R GPK G TVTT SP AYS A S LAT YQ S LQ
Sbjct: 140 RRSGPKAIVGQTVTTFSPFFSAYSKAVFSAITLATIYQSSFILQ 9
Score = 28.6 bits (56), Expect(2) = 2e-043
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / +1
Query: 225 PMTSDKLKKLGWKVR 181
P+ S+KLK LGWK R
Sbjct: 412 PIMSEKLKNLGWKPR 456
Score = 24.9 bits (48), Expect(2) = 1e-021
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2 / -1
Query: 182 LTFHPSFLSLSDVIG 226
L F P F S SD+IG
Sbjct: 455 LGFQPKFFSFSDIIG 411
>gb|BE360688.1|BE360688 DG1_66_C04.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 99.6 bits (211), Expect(3) = 6e-043
Identities = 37/74 (50%), Positives = 51/74 (68%)
Frame = -2 / +1
Query: 669 DKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPT 490
D + DE+CWSD EFC+ NWY K +E+AA + A+Q G+D+V VNP +V GPLLQPT
Sbjct: 331 DVVVDESCWSDLEFCKKTRNWYCYGKAVAEQAAWDAARQRGVDLVVVNPVLVVGPLLQPT 510
Query: 489 LNTSCQFLVYFLKG 448
+N S ++ +L G
Sbjct: 511 VNASIAHVLKYLDG 552
Score = 92.7 bits (196), Expect(3) = 6e-043
Identities = 39/59 (66%), Positives = 45/59 (76%)
Frame = -2 / +1
Query: 1005 GYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATPV 829
GYTV GTVR+ D K AHLK L+ A+E L L KAD+LDYDA+ AV GCQGVFH A+PV
Sbjct: 10 GYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASPV 186
Score = 22.6 bits (43), Expect(3) = 6e-043
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / +1
Query: 816 ITDPEREMLGPAVTGT 769
+TD +M+ PAV GT
Sbjct: 184 VTDDPEQMVEPAVRGT 231
>gb|BZ349735.1|BZ349735 hr45b01.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hr45b01 5', DNA sequence
Length = 583
Score = 107 bits (229), Expect(2) = 1e-042
Identities = 42/56 (75%), Positives = 49/56 (87%)
Frame = -2 / +3
Query: 615 ENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPTLNTSCQFLVYFLKG 448
++WY VAKI SEEAAL Y +QTGLDVVT+NP +VFGPLLQPT+N S QFL+YFLKG
Sbjct: 363 QSWYPVAKIISEEAALAYGRQTGLDVVTINPGLVFGPLLQPTVNASIQFLIYFLKG 530
Score = 87.7 bits (185), Expect(2) = 1e-042
Identities = 35/70 (50%), Positives = 43/70 (61%)
Frame = -2 / +2
Query: 822 GKITDPEREMLGPAVTGTINALKXXXXXXXXXXXXXXXXXXVEINPKDWPKDKIKDENCW 643
G + + +MLGPAVTGT N LK VEI+PKDWP+ KI+DE+CW
Sbjct: 32 GLTNNVQLQMLGPAVTGTTNVLKAASAANVQRVVVVSSMVAVEISPKDWPEGKIRDESCW 211
Query: 642 SDKEFCRNEE 613
SDKEFCR+ E
Sbjct: 212 SDKEFCRSIE 241
Score = 81.7 bits (172), Expect(2) = 5e-033
Identities = 37/66 (56%), Positives = 44/66 (66%)
Frame = +1 / -1
Query: 613 LFVPAELFI*PAVLIFDLVFGPVFRVDLNGNHG*NDDHSTSICSRRSLECVYGAGNSRTQ 792
L PAE F+*PA LI DL F P+F DLNGNHG*++ HS I R SLE + +SRTQ
Sbjct: 241 LNAPAEFFV*PAALISDLTFRPIFGADLNGNHG*HNHHSLDIRGRGSLEHISCTSDSRTQ 62
Query: 793 HLSLWI 810
HL L +
Sbjct: 61 HL*LHV 44
Score = 81.7 bits (172), Expect(2) = 5e-033
Identities = 37/57 (64%), Positives = 40/57 (70%)
Frame = +2 / -1
Query: 449 PFRK*TRN*QLVLSVGCRRGPKTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSS 619
P RK* RN L +VGC RGP T GL VTTSSPVC Y+SAASS+ ILAT YQ S
Sbjct: 529 PLRK*MRNWMLAFTVGCSRGPNTNPGLIVTTSSPVCRPYASAASSEMILATGYQLWS 359
Score = 77.1 bits (162), Expect(2) = 2e-021
Identities = 36/64 (56%), Positives = 40/64 (62%)
Frame = -3 / +3
Query: 803 SERCWVLLLPAP*THSRLRLLQMLVEWSSFHPWLPLRSTRKTGPKTRSKMRTAGQIKSSA 624
S +CWVLL SRL L +M EW HPWLPLRS K G K RS+MR AGQ K+SA
Sbjct: 51 SYKCWVLLSLVQLMCSRLPLPRMSSEWWLCHPWLPLRSAPKIGLKVRSEMRAAGQTKNSA 230
Query: 623 GTKR 612
G R
Sbjct: 231 GALR 242
Score = 74.4 bits (156), Expect(2) = 9e-025
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = +1 / -3
Query: 448 SFQEVDEELTARVERRLQKRAKDHSWIDRHNIQPGLLRVFKCGLF*RDLGDRIPVL 615
+F+EVDEEL A V RRLQ+ A+ WID H+++PGL V + LF* DLGDR+P L
Sbjct: 530 TFEEVDEELDACVHRRLQQGAEHQPWIDSHHVKPGLPPVCERRLF*DDLGDRVPAL 363
Score = 63.8 bits (133), Expect(2) = 9e-025
Identities = 31/61 (50%), Positives = 33/61 (54%)
Frame = +2 / -2
Query: 614 SSFLQNSLSDQQFSSLILSLGQSFGLISXXXXXXXXXXXXXXXXXXXLSAFMVPVTAGPS 793
S LQNSLSDQQ SS IL GQS GLIS LS +VPVTAGP+
Sbjct: 240 SMLLQNSLSDQQLSSRILPSGQSLGLISTATMDDTTTTRWTFAAEAALSTLVVPVTAGPN 61
Query: 794 I 796
I
Sbjct: 60 I 58
Score = 50.1 bits (103), Expect(2) = 2e-021
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = -1 / +2
Query: 598 RQDLVRRGRT*IREADRAGCCDGQSSCGLWPSSAADAQHELSVPRLLPER 449
RQD +RRG IR A+RA D QS G+ P +AAD + + VP LLP+R
Sbjct: 380 RQDHLRRGGARIRAANRA*RGDYQSRVGVRPPAAADGERKHPVPHLLPQR 529
>gb|BE357273.1|BE357273 DG1_148_D02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 548
Score = 174 bits (375), Expect = 2e-042
Identities = 73/106 (68%), Positives = 85/106 (80%)
Frame = -2 / +2
Query: 1071 TACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLD 892
T CVT A IASWLVKLLLSRGYTVH TVRD D K AHL RLE ASENL+LFKA+VLD
Sbjct: 203 TVCVTGAGGYIASWLVKLLLSRGYTVHATVRDPGDPKNAHLGRLEGASENLRLFKANVLD 382
Query: 891 YDAMAGAVAGCQGVFHVATPVPSGKITDPEREMLGPAVTGTINALK 754
+A+A AV+GC+GVFH+A PVP+ K+ DPE E+L PAV GT+N L+
Sbjct: 383 QNALAAAVSGCRGVFHLACPVPTDKVLDPESEVLAPAVQGTLNILQ 520
Score = 113 bits (242), Expect = 5e-024
Identities = 65/103 (63%), Positives = 66/103 (64%)
Frame = +2 / -3
Query: 764 FMVPVTAGPSISRSGSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSN 943
F VP TAG S S SGS GTG A KTP HP TA A A S T AL S RFSEA S+
Sbjct: 510 FKVPCTAGASTSDSGSRTLSVGTGQARWKTPRHPETAAASAFWSSTLALNSRRFSEAPSS 331
Query: 944 RFR*AVLLSLRSRTVPWTV*PRERRSLTSHEAMXXXAXVTHAV 1072
R R A L S SRTV TV*PRERRSLTSHEAM A VTH V
Sbjct: 330 RPRWAFLGSPGSRTVACTV*PRERRSLTSHEAM*PPAPVTHTV 202
Score = 104 bits (222), Expect = 3e-021
Identities = 52/107 (48%), Positives = 66/107 (61%)
Frame = +1 / -2
Query: 751 SLECVYGAGNSRTQHLSLWIGDLP*RNRSGDMKDSLAPCDCTRHSVVVKDISLEKLEVFG 930
SL+ V G +SR+Q+ L I +L +R+G M+D AP DC V+V+ + LE+ EV
Sbjct: 523 SLKNVQGTLHSRSQYF*LRIKNLIRGHRTGKMEDPPAPGDCGSQRVLVEHVGLEQPEVLR 344
Query: 931 SIL*PLQMSGFIVTEVADGAVDGVATGEEELDEPRGDVXXGXRHARR 1071
P Q+ +T VADG V GVA GEEELDEPRGDV G RHA R
Sbjct: 343 GPFQPPQVGVLGITRVADGGVHGVAAGEEELDEPRGDVAAGARHAHR 203
>gb|CX607102.1|CX607102 ANR1_6_E09.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_E09_A002 5', mRNA sequence
Length = 742
Score = 120 bits (256), Expect(3) = 2e-041
Identities = 51/85 (60%), Positives = 61/85 (71%)
Frame = -2 / +2
Query: 1083 GSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKA 904
G+ +T CVT A IASWLVK+LL +GYTV GTV + D K AHLK L+ A+E L L KA
Sbjct: 188 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVWNPDDPKNAHLKGLDGAAERLILCKA 367
Query: 903 DVLDYDAMAGAVAGCQGVFHVATPV 829
D+LDYDA+ AV GCQGVF +PV
Sbjct: 368 DLLDYDAICRAVQGCQGVFRTGSPV 442
Score = 67.0 bits (140), Expect(3) = 2e-041
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = -2 / +2
Query: 669 DKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVV 514
D + DE+CWSD FC+ NWY K +E+AA + A+ G+D+V VNP +V
Sbjct: 587 DVVVDESCWSDL*FCKKTRNWYCYGKAVAEQAAWDAARHRGVDLVVVNPVLV 742
Score = 22.6 bits (43), Expect(3) = 2e-041
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / +2
Query: 816 ITDPEREMLGPAVTGT 769
+TD +M+ PAV GT
Sbjct: 440 VTDDPEQMVEPAVRGT 487
>gb|CN125588.1|CN125588 RHOH1_12_B03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_12_B03_A002 3', mRNA sequence
Length = 763
Score = 112 bits (240), Expect(3) = 5e-041
Identities = 42/77 (54%), Positives = 56/77 (72%)
Frame = -2 / +1
Query: 678 WPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLL 499
WP+D++ DE CWSD EFCR +NWY ++K +E A +YAK+TGLDVV+V P++V GPL
Sbjct: 76 WPQDEVMDEACWSDVEFCRTNQNWYCLSKTLAETEAFDYAKRTGLDVVSVCPSLVIGPLR 255
Query: 498 QPTLNTSCQFLVYFLKG 448
Q T+N S +V LKG
Sbjct: 256 QSTVNASSSIIVDCLKG 306
Score = 77.1 bits (162), Expect(3) = 2e-022
Identities = 39/77 (50%), Positives = 48/77 (62%)
Frame = +2 / -3
Query: 449 PFRK*TRN*QLVLSVGCRRGPKTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQ 628
PF++ T L +V CR+GP T G T TTSSPV A S+A+ S +L +YQF LQ
Sbjct: 305 PFKQSTMMELLAFTVDCRKGPITRDGQTDTTSSPVLLA*SNASVSASVLERQYQF*LVLQ 126
Query: 629 NSLSDQQFSSLILSLGQ 679
NS SDQQ SS+ S GQ
Sbjct: 125 NSTSDQQASSMTSSWGQ 75
Score = 69.8 bits (146), Expect(3) = 5e-041
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = -2 / +1
Query: 447 GPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFISARDLLELLKTMYP 280
G ++ KL + VDVRD A+ALLLVYETP+ASGR+IC + D++ LLK YP
Sbjct: 304 GDHEVKLKLRNFVDVRDVANALLLVYETPEASGRYICDANARQVSDVIALLKNWYP 471
Score = 35.9 bits (72), Expect(3) = 2e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -3
Query: 335 AQMCLPEACGVSYTSRRASAVSLTSTMCQSLSLIRSGP 448
+QM P+A GVSYT RA A S TST S S P
Sbjct: 416 SQM*RPDASGVSYTRSRALATSRTSTKFLSFSFTS*SP 303
Score = 32.2 bits (64), Expect(3) = 2e-022
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1 / -2
Query: 151 NGFRNGFLQRPDLPSQFLELVGRHWSWVLHV 243
N G L+RP+ P+Q L+L+G ++ H+
Sbjct: 591 NAVPEGLLERPEFPAQRLQLLGAEQRFIAHL 499
Score = 25.8 bits (50), Expect(3) = 5e-041
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3 / +2
Query: 215 PTSSRNWDGRSGR*RNP 165
P S R W G SGR R P
Sbjct: 527 PRSWRRWAGNSGRSRRP 577
>gb|CX614598.1|CX614598 GABR1_15_C04.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_15_C04_A002 3', mRNA sequence
Length = 744
Score = 112 bits (240), Expect(3) = 5e-041
Identities = 42/77 (54%), Positives = 56/77 (72%)
Frame = -2 / +3
Query: 678 WPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLL 499
WP+D++ DE CWSD EFCR +NWY ++K +E A +YAK+TGLDVV+V P++V GPL
Sbjct: 54 WPQDEVMDEACWSDVEFCRTNQNWYCLSKTLAETEAFDYAKRTGLDVVSVCPSLVIGPLR 233
Query: 498 QPTLNTSCQFLVYFLKG 448
Q T+N S +V LKG
Sbjct: 234 QSTVNASSSIIVDCLKG 284
Score = 77.1 bits (162), Expect(3) = 2e-022
Identities = 39/77 (50%), Positives = 48/77 (62%)
Frame = +2 / -3
Query: 449 PFRK*TRN*QLVLSVGCRRGPKTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQ 628
PF++ T L +V CR+GP T G T TTSSPV A S+A+ S +L +YQF LQ
Sbjct: 283 PFKQSTMMELLAFTVDCRKGPITRDGQTDTTSSPVLLA*SNASVSASVLERQYQF*LVLQ 104
Query: 629 NSLSDQQFSSLILSLGQ 679
NS SDQQ SS+ S GQ
Sbjct: 103 NSTSDQQASSMTSSWGQ 53
Score = 69.8 bits (146), Expect(3) = 5e-041
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = -2 / +3
Query: 447 GPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFISARDLLELLKTMYP 280
G ++ KL + VDVRD A+ALLLVYETP+ASGR+IC + D++ LLK YP
Sbjct: 282 GDHEVKLKLRNFVDVRDVANALLLVYETPEASGRYICDANARQVSDVIALLKNWYP 449
Score = 35.9 bits (72), Expect(3) = 2e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -3
Query: 335 AQMCLPEACGVSYTSRRASAVSLTSTMCQSLSLIRSGP 448
+QM P+A GVSYT RA A S TST S S P
Sbjct: 394 SQM*RPDASGVSYTRSRALATSRTSTKFLSFSFTS*SP 281
Score = 32.2 bits (64), Expect(3) = 2e-022
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1 / -2
Query: 151 NGFRNGFLQRPDLPSQFLELVGRHWSWVLHV 243
N G L+RP+ P+Q L+L+G ++ H+
Sbjct: 569 NAVPEGLLERPEFPAQRLQLLGAEQRFIAHL 477
Score = 25.8 bits (50), Expect(3) = 5e-041
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3 / +1
Query: 215 PTSSRNWDGRSGR*RNP 165
P S R W G SGR R P
Sbjct: 505 PRSWRRWAGNSGRSRRP 555
>gb|CN146030.1|CN146030 WOUND1_37_A04.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_37_A04_A002 3', mRNA sequence
Length = 732
Score = 112 bits (240), Expect(3) = 5e-041
Identities = 42/77 (54%), Positives = 56/77 (72%)
Frame = -2 / +2
Query: 678 WPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLL 499
WP+D++ DE CWSD EFCR +NWY ++K +E A +YAK+TGLDVV+V P++V GPL
Sbjct: 44 WPQDEVMDEACWSDVEFCRTNQNWYCLSKTLAETEAFDYAKRTGLDVVSVCPSLVIGPLR 223
Query: 498 QPTLNTSCQFLVYFLKG 448
Q T+N S +V LKG
Sbjct: 224 QSTVNASSSIIVDCLKG 274
Score = 77.1 bits (162), Expect(3) = 2e-022
Identities = 39/77 (50%), Positives = 48/77 (62%)
Frame = +2 / -1
Query: 449 PFRK*TRN*QLVLSVGCRRGPKTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQ 628
PF++ T L +V CR+GP T G T TTSSPV A S+A+ S +L +YQF LQ
Sbjct: 273 PFKQSTMMELLAFTVDCRKGPITRDGQTDTTSSPVLLA*SNASVSASVLERQYQF*LVLQ 94
Query: 629 NSLSDQQFSSLILSLGQ 679
NS SDQQ SS+ S GQ
Sbjct: 93 NSTSDQQASSMTSSWGQ 43
Score = 69.8 bits (146), Expect(3) = 5e-041
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = -2 / +2
Query: 447 GPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFISARDLLELLKTMYP 280
G ++ KL + VDVRD A+ALLLVYETP+ASGR+IC + D++ LLK YP
Sbjct: 272 GDHEVKLKLRNFVDVRDVANALLLVYETPEASGRYICDANARQVSDVIALLKNWYP 439
Score = 35.9 bits (72), Expect(3) = 2e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -1
Query: 335 AQMCLPEACGVSYTSRRASAVSLTSTMCQSLSLIRSGP 448
+QM P+A GVSYT RA A S TST S S P
Sbjct: 384 SQM*RPDASGVSYTRSRALATSRTSTKFLSFSFTS*SP 271
Score = 32.2 bits (64), Expect(3) = 2e-022
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1 / -3
Query: 151 NGFRNGFLQRPDLPSQFLELVGRHWSWVLHV 243
N G L+RP+ P+Q L+L+G ++ H+
Sbjct: 559 NAVPEGLLERPEFPAQRLQLLGAEQRFIAHL 467
Score = 25.8 bits (50), Expect(3) = 5e-041
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3 / +3
Query: 215 PTSSRNWDGRSGR*RNP 165
P S R W G SGR R P
Sbjct: 495 PRSWRRWAGNSGRSRRP 545
>gb|CB925013.1|CB925013 ABA1_29_B06.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_29_B06_A012 5', mRNA sequence
Length = 642
Score = 170 bits (365), Expect = 5e-041
Identities = 71/98 (72%), Positives = 77/98 (78%)
Frame = -2 / +1
Query: 1101 RTEEAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASEN 922
R + T CVT A IASWLVKLLLSRGYTVHGTVRDLSD KT HLKRLENA+ N
Sbjct: 349 RRRQPMAGGTTVCVTGAGGFIASWLVKLLLSRGYTVHGTVRDLSDEKTNHLKRLENAAGN 528
Query: 921 LKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITD 808
L++FKAD+LDYDAMA AV GCQGV HVATPVPS +TD
Sbjct: 529 LRIFKADLLDYDAMAAAVVGCQGVLHVATPVPSENLTD 642
Score = 130 bits (279), Expect(2) = 3e-029
Identities = 63/88 (71%), Positives = 65/88 (73%)
Frame = +2 / -2
Query: 809 SVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTV 988
SV F EGTGVAT +TPWHP TA A+AS*S SALK LRF AFS RFR V SLRSRTV
Sbjct: 641 SVRFSEGTGVATWRTPWHPTTAAAMAS*SSRSALKILRFPAAFSRRFRWFVFSSLRSRTV 462
Query: 989 PWTV*PRERRSLTSHEAMXXXAXVTHAV 1072
P TV*PRE RS TSHEAM A VTH V
Sbjct: 461 PCTV*PRESRSFTSHEAMNPPAPVTHTV 378
Score = 109 bits (232), Expect = 1e-022
Identities = 54/95 (56%), Positives = 64/95 (67%)
Frame = +1 / -1
Query: 808 IGDLP*RNRSGDMKDSLAPCDCTRHSVVVKDISLEKLEVFGSIL*PLQMSGFIVTEVADG 987
+ + *R+ SG M++SLAP D + H VVV+ ISLE EV GSIL LQM +VTEVADG
Sbjct: 642 VSQVL*RHWSGHMENSLAPDDRSCHGVVVQQISLENPEVSGSILQALQMVRLLVTEVADG 463
Query: 988 AVDGVATGEEELDEPRGDVXXGXRHARRLRAPGGL 1092
AV GVA GE+EL EPRGD G HA R + GL
Sbjct: 462 AVHGVAAGEQELHEPRGDEPAGAGHAHRCTSGHGL 358
Score = 22.6 bits (43), Expect(2) = 3e-029
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3 / -3
Query: 1110 TWPPFSFSTSLIVRCCSCEVCL 1175
TWP SF+ S +++ +CL
Sbjct: 247 TWPSSSFAAS*LLQGLCALICL 182
>gb|CW031414.1|CW031414 104_260_10500796_114_30365 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500796, DNA
sequence
Length = 801
Score = 75.3 bits (158), Expect(3) = 8e-040
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = -2 / +2
Query: 954 HLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPE 802
HL L+ A E L+LFKAD+LD ++A AVAGC GVFHVA+PVP+ + T+P+
Sbjct: 2 HLMALDGAGERLRLFKADLLDRASVAAAVAGCDGVFHVASPVPAVEPTNPD 154
Score = 72.5 bits (152), Expect(3) = 8e-040
Identities = 29/56 (51%), Positives = 39/56 (69%)
Frame = -2 / +3
Query: 615 ENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPTLNTSCQFLVYFLKG 448
+NWY ++K +E AL Y ++TG+DVVTV P V GPLLQPT+N + V +LKG
Sbjct: 549 QNWYCLSKTVAEREALAYGERTGMDVVTVCPPWVLGPLLQPTVNATSMGFVKYLKG 716
Score = 56.5 bits (117), Expect(3) = 8e-040
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = -2 / +2
Query: 816 ITDPEREMLGPAVTGTINALKXXXXXXXXXXXXXXXXXXVEINPKDWPKDKIKDENCWSD 637
+T + E++ PAVTGT N L+ V NP P D + DE+CWSD
Sbjct: 242 VTCVQVEIMAPAVTGTQNMLEASHAANVRRVVVVSSVAAVIANPTSIPDDAVADEDCWSD 421
Query: 636 KEFCR 622
+++CR
Sbjct: 422 EDYCR 436
>gb|CF428507.1|CF428507 PH1_15_D07.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_15_D07_A002 5', mRNA sequence
Length = 623
Score = 165 bits (354), Expect = 2e-039
Identities = 69/93 (74%), Positives = 74/93 (79%)
Frame = -2 / +2
Query: 1101 RTEEAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASEN 922
R + T CVT A IASWLVKLLLSRGYTVHGTVRDLSD KT HLKRLENA+ N
Sbjct: 344 RRRQPMAGGTTVCVTGAGGFIASWLVKLLLSRGYTVHGTVRDLSDEKTNHLKRLENAAGN 523
Query: 921 LKLFKADVLDYDAMAGAVAGCQGVFHVATPVPS 823
L++FKAD+LDYDAMA AV GCQGV HVATPVPS
Sbjct: 524 LRIFKADLLDYDAMAAAVVGCQGVLHVATPVPS 622
Score = 126 bits (269), Expect(2) = 7e-028
Identities = 60/83 (72%), Positives = 62/83 (74%)
Frame = +2 / -3
Query: 824 EGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTVPWTV* 1003
EGTGVAT +TPWHP TA A+AS*S SALK LRF AFS RFR V SLRSRTVP TV*
Sbjct: 621 EGTGVATWRTPWHPTTAAAMAS*SSRSALKILRFPAAFSRRFRWFVFSSLRSRTVPCTV* 442
Query: 1004 PRERRSLTSHEAMXXXAXVTHAV 1072
PRE RS TSHEAM A VTH V
Sbjct: 441 PRESRSFTSHEAMNPPAPVTHTV 373
Score = 108 bits (231), Expect = 1e-022
Identities = 54/90 (60%), Positives = 62/90 (68%)
Frame = +1 / -2
Query: 823 *RNRSGDMKDSLAPCDCTRHSVVVKDISLEKLEVFGSIL*PLQMSGFIVTEVADGAVDGV 1002
*R+ SG M++SLAP D + H VVV+ ISLE EV GSIL LQM +VTEVADGAV GV
Sbjct: 622 *RHWSGHMENSLAPDDRSCHGVVVQQISLENPEVSGSILQALQMVRLLVTEVADGAVHGV 443
Query: 1003 ATGEEELDEPRGDVXXGXRHARRLRAPGGL 1092
A GE+EL EPRGD G HA R + GL
Sbjct: 442 AAGEQELHEPRGDEPAGAGHAHRCTSGHGL 353
Score = 22.6 bits (43), Expect(2) = 7e-028
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3 / -1
Query: 1110 TWPPFSFSTSLIVRCCSCEVCL 1175
TWP SF+ S +++ +CL
Sbjct: 242 TWPSSSFAAS*LLQGLCALICL 177
>gb|CF480908.1|CF480908 POL1_68_F11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_68_F11_A002 5', mRNA sequence
Length = 773
Score = 107 bits (229), Expect(3) = 4e-039
Identities = 43/123 (34%), Positives = 68/123 (55%)
Frame = -2 / +1
Query: 816 ITDPEREMLGPAVTGTINALKXXXXXXXXXXXXXXXXXXVEINPKDWPKDKIKDENCWSD 637
+ DP+ E+L PAV GT+N L V N K + DE ++D
Sbjct: 376 VKDPKAELLDPAVKGTLNVLGSCKKASITKVVITSSMAAVSYNEKPRTPEVTVDETWFTD 555
Query: 636 KEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPTLNTSCQFLVYF 457
+ C + WY ++K +E+AA ++++ G ++VT+NPA+V GPLLQPTLNTS + ++
Sbjct: 556 PQICEKTQQWYVLSKTLAEQAAWKFSRDNGFEIVTINPAMVIGPLLQPTLNTSAEAILKL 735
Query: 456 LKG 448
+ G
Sbjct: 736 ING 744
Score = 56.5 bits (117), Expect(3) = 4e-039
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = -2 / +2
Query: 1080 SAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSD 967
+ + CVT A IASW+V+LLL RGYTV TVRD +D
Sbjct: 149 AGKVVCVTGASGYIASWIVRLLLDRGYTVRATVRDTAD 262
Score = 37.7 bits (76), Expect(3) = 4e-039
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2 / +1
Query: 927 ENLKLFKADVLDYDAMAGAVAGCQGVFHVATP 832
+ L LFKA +L+ + AV GC VFH A+P
Sbjct: 268 DRLHLFKASLLEEGSFDAAVHGCDTVFHTASP 363
>gb|BG048617.1|BG048617 OV1_14_H08.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 482
Score = 144 bits (310), Expect(2) = 9e-039
Identities = 63/132 (47%), Positives = 82/132 (62%)
Frame = -2 / +1
Query: 1023 KLLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFH 844
+LL Y V GTVRD SD K AHL L+ A E L+LFKAD+LD ++A AVAGC GVFH
Sbjct: 85 RLLSRGDYLVRGTVRDPSDPKNAHLMALDGAGERLRLFKADLLDRASVAAAVAGCDGVFH 264
Query: 843 VATPVPSGKITDPEREMLGPAVTGTINALKXXXXXXXXXXXXXXXXXXVEINPKDWPKDK 664
VA+PVP+ + T+P+ E++ PAVTGT N L+ V NP P D
Sbjct: 265 VASPVPAVEPTNPDVEIMAPAVTGTQNMLEASHAANVRRVVVVSSVAAVIANPTSIPDDA 444
Query: 663 IKDENCWSDKEF 628
+ DE+CWSD+++
Sbjct: 445 VADEDCWSDEDY 480
Score = 89.5 bits (189), Expect(2) = 1e-023
Identities = 57/124 (45%), Positives = 60/124 (48%)
Frame = +2 / -1
Query: 626 QNSLSDQQFSSLILSLGQSFGLISXXXXXXXXXXXXXXXXXXXLSAFMVPVTAGPSISRS 805
Q S SDQQ SS S G G S F VPVTAG IS S
Sbjct: 482 Q*SSSDQQSSSATASSGMLVGFAITAATDDTTTTRRTLAAWLASSMFCVPVTAGAMISTS 303
Query: 806 GSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR*AVLLSLRSRT 985
G V GTG+AT KTP PATA A + S SAL S R S A S+ R A L SL SRT
Sbjct: 302 GLVGSTAGTGLATWKTPSQPATAAATLARSNKSALNSRRRSPAPSSAIRCAFLGSLGSRT 123
Query: 986 VPWT 997
VP T
Sbjct: 122 VPRT 111
Score = 42.3 bits (86), Expect(2) = 1e-023
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +1 / -3
Query: 1000 VATGEEELDEPRGDVXXGXRHARRL 1074
VA+GEE L EPRGD G RHA RL
Sbjct: 105 VASGEEALHEPRGDEAAGARHAHRL 31
Score = 37.7 bits (76), Expect(2) = 9e-039
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -2 / +1
Query: 1074 ETACVTXAXXXIASWLVKLLLSRG 1003
+T CVT A +ASWLV+ LLSRG
Sbjct: 31 KTVCVTGAGGFVASWLVQRLLSRG 102
>gb|CW403430.1|CW403430 fsbb001f095c10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f095c10, DNA
sequence
Length = 661
Score = 110 bits (235), Expect(2) = 3e-038
Identities = 44/62 (70%), Positives = 50/62 (80%)
Frame = -2 / +1
Query: 969 DNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPEREML 790
D KT HLKRLENA+ NL++FKAD+LDYDAMA AV GCQGV HVATPVPS +TDPE +
Sbjct: 403 DEKTNHLKRLENAAGNLRIFKADLLDYDAMAAAVVGCQGVLHVATPVPSENLTDPEASLF 582
Query: 789 GP 784
P
Sbjct: 583 FP 588
Score = 82.2 bits (173), Expect(2) = 2e-026
Identities = 37/50 (74%), Positives = 39/50 (78%)
Frame = +2 / -3
Query: 803 SGSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR 952
SGSV F EGTGVAT +TPWHP TA A+AS*S SALK LRF AFS RFR
Sbjct: 569 SGSVRFSEGTGVATWRTPWHPTTAAAMAS*SSRSALKILRFPAAFSRRFR 420
Score = 70.3 bits (147), Expect(2) = 3e-038
Identities = 30/44 (68%), Positives = 31/44 (70%)
Frame = -2 / +2
Query: 1101 RTEEAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLS 970
R + T CVT A IASWLVKLLLSRGYTVHGTVRDLS
Sbjct: 191 RRRQPMAGGTTVCVTGAGGFIASWLVKLLLSRGYTVHGTVRDLS 322
Score = 59.3 bits (123), Expect(2) = 2e-026
Identities = 26/41 (63%), Positives = 28/41 (68%)
Frame = +1 / -1
Query: 970 TEVADGAVDGVATGEEELDEPRGDVXXGXRHARRLRAPGGL 1092
TEVADGAV GVA GE+EL EPRGD G HA R + GL
Sbjct: 322 TEVADGAVHGVAAGEQELHEPRGDEPAGAGHAHRCTSGHGL 200
>gb|AW922257.1|AW922257 DG1_17_G01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 559
Score = 100 bits (212), Expect(2) = 5e-038
Identities = 42/78 (53%), Positives = 55/78 (70%)
Frame = -2 / +2
Query: 1062 VTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDA 883
VT A IASWLVK LL +GYTV GTVR+ D K HL+ L+ A++ L L +AD+LD ++
Sbjct: 11 VTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGAADRLVLLRADLLDPES 190
Query: 882 MAGAVAGCQGVFHVATPV 829
+ A +GC GVFH A+PV
Sbjct: 191 LVEAFSGCDGVFHAASPV 244
Score = 82.6 bits (174), Expect(2) = 5e-038
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = -2 / +2
Query: 669 DKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLL 499
+K D+ CWSD E+C+N +NWY AK +E+ A E A++ GLD++ VNP +V GPLL
Sbjct: 386 NKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRGLDLIVVNPVLVLGPLL 556
>gb|BM324463.1|BM324463 PIC1_31_E07.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 484
Score = 137 bits (293), Expect(2) = 6e-038
Identities = 55/89 (61%), Positives = 71/89 (79%)
Frame = -2 / +2
Query: 1020 LLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHV 841
LL + Y V GTVRDL D K AHL LE+A E L+L KAD+LDY ++A AVAGC+GVFHV
Sbjct: 146 LLSTGRYAVRGTVRDLGDGKNAHLMTLEDAGERLQLVKADMLDYGSVASAVAGCEGVFHV 325
Query: 840 ATPVPSGKITDPEREMLGPAVTGTINALK 754
A+PVPSG++++PE +++ PAVTGT+N LK
Sbjct: 326 ASPVPSGQLSNPEADVIAPAVTGTLNVLK 412
Score = 42.8 bits (87), Expect(2) = 6e-038
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -2 / +2
Query: 1083 GSAETACVTXAXXXIASWLVKLLLSRG 1003
G+ TACVT A +ASWLVKLLLS G
Sbjct: 80 GTVVTACVTGAGGFLASWLVKLLLSTG 160
>gb|CW192938.1|CW192938 104_615_11179297_116_36769_005 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11179297, DNA
sequence
Length = 712
Score = 110 bits (235), Expect(2) = 8e-038
Identities = 44/62 (70%), Positives = 50/62 (80%)
Frame = -2 / -3
Query: 969 DNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPEREML 790
D KT HLKRLENA+ NL++FKAD+LDYDAMA AV GCQGV HVATPVPS +TDPE +
Sbjct: 230 DEKTNHLKRLENAAGNLRIFKADLLDYDAMAAAVVGCQGVLHVATPVPSENLTDPEASLF 51
Query: 789 GP 784
P
Sbjct: 50 FP 45
Score = 82.2 bits (173), Expect(2) = 8e-026
Identities = 37/50 (74%), Positives = 39/50 (78%)
Frame = +2 / +1
Query: 803 SGSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR 952
SGSV F EGTGVAT +TPWHP TA A+AS*S SALK LRF AFS RFR
Sbjct: 64 SGSVRFSEGTGVATWRTPWHPTTAAAMAS*SSRSALKILRFPAAFSRRFR 213
Score = 68.9 bits (144), Expect(2) = 8e-038
Identities = 29/34 (85%), Positives = 29/34 (85%)
Frame = -2 / -1
Query: 1071 TACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLS 970
T CVT A IASWLVKLLLSRGYTVHGTVRDLS
Sbjct: 412 TVCVTGAGGFIASWLVKLLLSRGYTVHGTVRDLS 311
Score = 57.0 bits (118), Expect(2) = 8e-026
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = +1 / +2
Query: 970 TEVADGAVDGVATGEEELDEPRGDVXXGXRHARR 1071
TEVADGAV GVA GE+EL EPRGD G HA R
Sbjct: 311 TEVADGAVHGVAAGEQELHEPRGDEPAGAGHAHR 412
>gb|CB924988.1|CB924988 ABA1_29_B06.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_29_B06_A012 3', mRNA sequence
Length = 617
Score = 96.4 bits (204), Expect(2) = 2e-037
Identities = 38/56 (67%), Positives = 43/56 (76%)
Frame = -2 / +3
Query: 276 DYPFISKESIYDMEHPAPMTSDKLKKLGWKVRPLKEPIAETVEFCQHAGFFEDVEG 109
D PFI+KESI D +HPAPMTSDKLKKLGW RPL+E I +TVE CQ AGF + G
Sbjct: 114 DNPFIAKESICDRDHPAPMTSDKLKKLGWSCRPLEETILDTVECCQRAGFLDGAAG 281
Score = 81.7 bits (172), Expect(2) = 2e-037
Identities = 31/39 (79%), Positives = 37/39 (94%)
Frame = -2 / +3
Query: 390 DALLLVYETPQASGRHICAPHFISARDLLELLKTMYPDD 274
DALLL+YE P+A+GRHICAPH ISARDLL+LLK+MYPD+
Sbjct: 3 DALLLLYEVPEAAGRHICAPHVISARDLLDLLKSMYPDN 119
>gb|CD213339.1|CD213339 HS1_40_A07.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_40_A07_A012 3', mRNA sequence
Length = 610
Score = 95.5 bits (202), Expect(2) = 4e-037
Identities = 38/56 (67%), Positives = 42/56 (75%)
Frame = -2 / +3
Query: 276 DYPFISKESIYDMEHPAPMTSDKLKKLGWKVRPLKEPIAETVEFCQHAGFFEDVEG 109
D PFI+KESI D +HPAPMTSDKLKKLGW RPL+E I +TVE CQ AGF G
Sbjct: 114 DNPFIAKESICDRDHPAPMTSDKLKKLGWSCRPLEETILDTVECCQRAGFLNGAAG 281
Score = 81.7 bits (172), Expect(2) = 4e-037
Identities = 31/39 (79%), Positives = 37/39 (94%)
Frame = -2 / +3
Query: 390 DALLLVYETPQASGRHICAPHFISARDLLELLKTMYPDD 274
DALLL+YE P+A+GRHICAPH ISARDLL+LLK+MYPD+
Sbjct: 3 DALLLLYEVPEAAGRHICAPHVISARDLLDLLKSMYPDN 119
>gb|CD431095.1|CD431095 ETH1_6_A10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_A10_A002 5', mRNA sequence
Length = 681
Score = 121 bits (259), Expect(3) = 4e-036
Identities = 49/85 (57%), Positives = 58/85 (68%)
Frame = -2 / +3
Query: 1083 GSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKA 904
G T CVT A + SW+VKLLL RGY V GTVR+ D K AHL+ L A+E L L KA
Sbjct: 195 GQTTTVCVTGAGGYVGSWIVKLLLERGYAVRGTVRNPDDAKNAHLRALPGATERLALCKA 374
Query: 903 DVLDYDAMAGAVAGCQGVFHVATPV 829
D+LDYD + A+AGC GVFH A+PV
Sbjct: 375 DLLDYDTLRAAIAGCHGVFHTASPV 449
Score = 43.7 bits (89), Expect(3) = 4e-036
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -2 / +3
Query: 669 DKIKDENCWSDKEFCRNEENWY 604
D + DE+CWSD +FC+ +NWY
Sbjct: 594 DAVVDESCWSDLDFCKKTKNWY 659
Score = 26.7 bits (52), Expect(3) = 4e-036
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2 / +3
Query: 816 ITDPEREMLGPAVTGT 769
+TD EM+ PAVTGT
Sbjct: 447 VTDDPEEMVEPAVTGT 494
>gb|CW194134.1|CW194134 104_617_11179939_116_36785_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11179939, DNA
sequence
Length = 730
Score = 67.5 bits (141), Expect(3) = 8e-035
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = -2 / +2
Query: 447 GPDRMRDKLWHIVDVRDTADALLLVYETPQAS 352
GPD++ DKLWHIVDVRDTADALLLVYE P S
Sbjct: 32 GPDQVMDKLWHIVDVRDTADALLLVYEAPDTS 127
Score = 64.3 bits (134), Expect(3) = 8e-035
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = -2 / +2
Query: 264 ISKESIYDMEHPAPMTSDKLKKLGWKVRPLKEP 166
I +ESIY MEH AP+ SDKLKKLGWKVRPL+ P
Sbjct: 287 IGRESIYGMEHLAPIMSDKLKKLGWKVRPLRAP 385
Score = 55.6 bits (115), Expect(3) = 8e-035
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = -2 / +1
Query: 330 HFISARDLLELLKTMYPDDYPFISK 256
HF++AR LL+LLKTMYPDDYPFI+K
Sbjct: 133 HFVNARGLLDLLKTMYPDDYPFITK 207
Score = 54.7 bits (113), Expect(3) = 2e-022
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -1 / +1
Query: 256 GEHLRHGAPSSNDVRQAQETGMEGQAAEGTHCG 158
GEHL HGAPSSN VR A+ET MEGQAA+ T G
Sbjct: 295 GEHLWHGAPSSNYVR*AEETRMEGQAAKSTRNG 393
Score = 51.9 bits (107), Expect(3) = 4e-024
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = +1 / -1
Query: 178 RPDLPSQFLELVGRHWSWVLHVVDALLANERV 273
RPDLPS FL+L+G +WS VLH +DAL N R+
Sbjct: 373 RPDLPS*FLQLIGHNWS*VLHAIDALPTNFRI 278
Score = 51.0 bits (105), Expect(3) = 2e-022
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = -3 / +2
Query: 338 ALLISSARVTCWSC*RRCTLMITLSLARRASTT 240
++LISS V CW+C*R CTLMITLSL + S T
Sbjct: 125 SVLISSTPVACWTC*RPCTLMITLSLPSKPSLT 223
Score = 50.6 bits (104), Expect(3) = 1e-022
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +1 / -2
Query: 241 VVDALLANERVIIRVHRLQQLQQVTRADEMRS 336
V + LL NERVIIRVH LQQ+QQ T DEMR+
Sbjct: 222 VREGLLGNERVIIRVHGLQQVQQATGVDEMRT 127
Score = 50.1 bits (103), Expect(3) = 4e-024
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +2 / -2
Query: 353 EACGVSYTSRRASAVSLTSTMCQSLSLIRSGP 448
+ G S TSRRASAVS TSTMCQSLS+ SGP
Sbjct: 126 DVSGAS*TSRRASAVSRTSTMCQSLSIT*SGP 31
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = +3 / -1
Query: 261 **KGNHQGTSSSAAPAGHAR**NEERKCAC 350
**KGNHQGT SSA+PAGH R* NE R C
Sbjct: 202 **KGNHQGTWSSASPAGHGR*RNENRCVGC 113
Score = 48.3 bits (99), Expect(3) = 1e-022
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +2 / -2
Query: 167 GSFSGLTFHPSFLSLSDVIGAGC 235
G+ SGLTFHPSF SLSD+IGA C
Sbjct: 384 GALSGLTFHPSFFSLSDIIGARC 316
Score = 46.9 bits (96), Expect(3) = 1e-022
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3 / -3
Query: 384 EHRQCP*RRRCAKACPSFDQVLL 452
EH+QCP R+RCAK CPS DQV L
Sbjct: 95 EHQQCPERQRCAKVCPSLDQVPL 27
Score = 39.6 bits (80), Expect(3) = 2e-022
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = -1 / +1
Query: 463 LLPERRT*SNEGQALAHRRRQGHCRCS 383
L + T*S++GQ LAHR R GHC CS
Sbjct: 16 LAKRKGT*SSDGQTLAHR*RSGHC*CS 96
>gb|CD206390.1|CD206390 HS1_22_H01.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_22_H01_A012 5', mRNA sequence
Length = 592
Score = 149 bits (319), Expect = 1e-034
Identities = 62/86 (72%), Positives = 67/86 (77%)
Frame = -2 / +2
Query: 1101 RTEEAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASEN 922
R + T CVT A IASWLVKLLLSRGYTVHGTVRDLSD KT HLKRLENA+ N
Sbjct: 335 RRRQPMAGGTTVCVTGAGGFIASWLVKLLLSRGYTVHGTVRDLSDEKTNHLKRLENAAGN 514
Query: 921 LKLFKADVLDYDAMAGAVAGCQGVFH 844
L++FKAD+LDYDAMA AV GCQGV H
Sbjct: 515 LRIFKADLLDYDAMAAAVVGCQGVLH 592
Score = 111 bits (238), Expect(2) = 1e-023
Identities = 53/75 (70%), Positives = 55/75 (73%)
Frame = +2 / -2
Query: 848 KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTVPWTV*PRERRSLT 1027
+TPWHP TA A+AS*S SALK LRF AFS RFR V SLRSRTVP TV*PRE RS T
Sbjct: 588 RTPWHPTTAAAMAS*SSRSALKILRFPAAFSRRFRWFVFSSLRSRTVPCTV*PRESRSFT 409
Query: 1028 SHEAMXXXAXVTHAV 1072
SHEAM A VTH V
Sbjct: 408 SHEAMNPPAPVTHTV 364
Score = 102 bits (218), Expect = 9e-021
Identities = 50/83 (60%), Positives = 57/83 (68%)
Frame = +1 / -1
Query: 844 MKDSLAPCDCTRHSVVVKDISLEKLEVFGSIL*PLQMSGFIVTEVADGAVDGVATGEEEL 1023
M++SLAP D + H VVV+ ISLE EV GSIL LQM +VTEVADGAV GVA GE+EL
Sbjct: 592 MENSLAPDDRSCHGVVVQQISLENPEVSGSILQALQMVRLLVTEVADGAVHGVAAGEQEL 413
Query: 1024 DEPRGDVXXGXRHARRLRAPGGL 1092
EPRGD G HA R + GL
Sbjct: 412 HEPRGDEPAGAGHAHRCTSGHGL 344
Score = 22.6 bits (43), Expect(2) = 1e-023
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3 / -3
Query: 1110 TWPPFSFSTSLIVRCCSCEVCL 1175
TWP SF+ S +++ +CL
Sbjct: 233 TWPSSSFAAS*LLQGLCALICL 168
>gb|CN147237.1|CN147237 WOUND1_48_B05.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_48_B05_A002 5', mRNA sequence
Length = 737
Score = 75.3 bits (158), Expect(3) = 2e-034
Identities = 29/72 (40%), Positives = 51/72 (70%)
Frame = -2 / +1
Query: 969 DNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPEREML 790
+++T HL+ ++ A+ L+LF+ D+L+ ++ AV G +GVFHVA+PV + DPE E++
Sbjct: 223 ESETKHLQAMDGANSRLRLFQMDLLEPASIRPAVEGARGVFHVASPVILHRAQDPENELV 402
Query: 789 GPAVTGTINALK 754
PA+ GT++ L+
Sbjct: 403 EPALKGTLSVLR 438
Score = 58.3 bits (121), Expect(3) = 2e-034
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = -2 / +1
Query: 1092 EAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSD 967
+ G + CVT I SWLV+LLL RGYTVH TV++L D
Sbjct: 97 DGGGGSSLVCVTGGSGFIGSWLVRLLLGRGYTVHATVKNLQD 222
Score = 57.4 bits (119), Expect(3) = 2e-034
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = -2 / +1
Query: 528 NPAVVFGPLLQPTLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASG 349
NPA+V GP L + S Q + + G M + VDVRD A +L+++YE A G
Sbjct: 502 NPALVLGPTLTLNIMASLQMFLQIMGGKKYDMDEFFIGCVDVRDVAQSLIVLYENTSAEG 681
Query: 348 RHIC 337
RH+C
Sbjct: 682 RHLC 693
>gb|AW671852.1|AW671852 LG1_352_C05.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 570
Score = 109 bits (232), Expect(2) = 7e-034
Identities = 47/78 (60%), Positives = 55/78 (70%)
Frame = -2 / +1
Query: 987 TVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITD 808
+V D K AHLK+L+ A ENL LFKADVLD + + AV GCQGVFH+ATPVP KI
Sbjct: 313 SVTHACDPKNAHLKKLDRAPENLHLFKADVLDCETLTPAVQGCQGVFHLATPVPEDKILH 492
Query: 807 PEREMLGPAVTGTINALK 754
P+ E+L PAV GT N LK
Sbjct: 493 PDLEVLDPAVKGT*NVLK 546
Score = 57.0 bits (118), Expect(2) = 7e-034
Identities = 24/39 (61%), Positives = 25/39 (64%)
Frame = -2 / +3
Query: 1092 EAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRD 976
E A CVT IASWLVKLLLSRGY VH T+RD
Sbjct: 204 EMASQLPRVCVTGGGGFIASWLVKLLLSRGYAVHATLRD 320
>gb|CN127950.1|CN127950 RHOH1_26_C10.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_26_C10_A002 3', mRNA sequence
Length = 800
Score = 125 bits (267), Expect(2) = 2e-033
Identities = 51/94 (54%), Positives = 70/94 (74%)
Frame = -2 / +1
Query: 561 AKQTGLDVVTVNPAVVFGPLLQPTLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADAL 382
A +TGLDVVT+ PA+VFGPL+Q LN S + L+ + KG + + ++L +IVDVRD ADAL
Sbjct: 1 AAKTGLDVVTICPALVFGPLMQSILNASSKILLNYFKGDRETIENRLRNIVDVRDVADAL 180
Query: 381 LLVYETPQASGRHICAPHFISARDLLELLKTMYP 280
LL YE P+ASGR+IC+ I D++ +LKT+YP
Sbjct: 181 LLAYEKPEASGRYICSSQPIKVSDMINILKTLYP 282
Score = 39.6 bits (80), Expect(2) = 2e-033
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = -2 / +1
Query: 255 ESIYDMEHPAPMTSDKLKKLGWKVRPLKEPIAETVE 148
++ +M+ + +S+KL+KLGW RP++E + E+VE
Sbjct: 298 KNFVEMDDNSIYSSEKLQKLGWTFRPIEETLRESVE 405
>emb|AX512962.1| Sequence 7 from Patent WO02063021
Length = 697
Score = 72.5 bits (152), Expect(3) = 3e-033
Identities = 31/70 (44%), Positives = 44/70 (62%)
Frame = -2 / +1
Query: 963 KTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPEREMLGP 784
KTAHL +L A E L++ +AD+L+ + AV C GVFH A+PV + + + E L P
Sbjct: 103 KTAHLWKLPGAKERLQIVRADLLEEGSFDNAVMDCDGVFHTASPVLAKSDSSSKEETLCP 282
Query: 783 AVTGTINALK 754
AV GT+N L+
Sbjct: 283 AVNGTLNVLR 312
Score = 66.1 bits (138), Expect(3) = 3e-033
Identities = 27/74 (36%), Positives = 42/74 (56%)
Frame = -2 / +1
Query: 657 DENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPTLNTS 478
DE WS C + WY++AK+ +E+AA E+AK+ +D+VTV P+ V GP L L +
Sbjct: 409 DETTWSSVPLCEKMQLWYALAKVFAEKAAWEFAKENNIDLVTVLPSFVIGPSLSHELCVT 588
Query: 477 CQFLVYFLKGGPDR 436
++ +G R
Sbjct: 589 ASDVLGLFQGDTAR 630
Score = 43.2 bits (88), Expect(3) = 3e-033
Identities = 19/29 (65%), Positives = 20/29 (68%)
Frame = -2 / +1
Query: 1062 VTXAXXXIASWLVKLLLSRGYTVHGTVRD 976
VT A IASWL+K LL GY V GTVRD
Sbjct: 1 VTGASGFIASWLIKRLLESGYHVVGTVRD 87
>gb|CL173566.1|CL173566 104_377_10890963_116_31793_099 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890963, DNA
sequence
Length = 772
Score = 89.0 bits (188), Expect(4) = 6e-033
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = -2 / -1
Query: 969 DNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPE 802
D K AHLK+L+ A ENL LFKADVLD + + AV GCQGVFH+ATPVP KI P+
Sbjct: 622 DPKNAHLKKLDRAPENLHLFKADVLDCETLTPAVQGCQGVFHLATPVPEDKILHPD 455
Score = 52.4 bits (108), Expect(4) = 6e-033
Identities = 16/33 (48%), Positives = 27/33 (81%)
Frame = -2 / -2
Query: 681 DWPKDKIKDENCWSDKEFCRNEENWYSVAKISS 583
+WP+D++KDE+CWSD EFC+ +E S A++++
Sbjct: 150 NWPQDRLKDESCWSDTEFCKEKEVSNSSARLNA 52
Score = 37.7 bits (76), Expect(4) = 6e-033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2 / -3
Query: 1029 LVKLLLSRGYTVHGTVRD 976
LVKLLLSRGY VH T+RD
Sbjct: 770 LVKLLLSRGYAVHATLRD 717
Score = 25.4 bits (49), Expect(4) = 6e-033
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1 / -1
Query: 802 ARDAGSCCYRHHKRTQGCVCCKCSSSGRRFIHGCR*DQPE 683
AR G CC R+ K +G + + S S + C QPE
Sbjct: 268 ARSTGPCCERYLKCFKGLLNSEGSQSCCDVLQCCCYFQPE 149
>gb|CF756225.1|CF756225 DSAF1_4_G03.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_4_G03_A011 5', mRNA sequence
Length = 537
Score = 97.7 bits (207), Expect(2) = 1e-032
Identities = 39/101 (38%), Positives = 61/101 (60%)
Frame = -2 / +1
Query: 678 WPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLL 499
WP +++DE CW+D ++ WY V+K +E+AA ++A++ G+DVV VNP V G ++
Sbjct: 235 WPAGEVRDERCWTDIDYSEKNGVWYPVSKTLAEKAAWKFAEENGVDVVVVNPTSVLGTII 414
Query: 498 QPTLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLL 376
PT+N+S L+ L+G + +D V V D A A LL
Sbjct: 415 PPTINSSMSVLLRLLQGCTEEYKDIWMGAVHVEDVALAHLL 537
Score = 64.3 bits (134), Expect(2) = 1e-032
Identities = 23/53 (43%), Positives = 37/53 (69%)
Frame = -2 / +1
Query: 912 FKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPEREMLGPAVTGTINALK 754
F+ D+LD A+ A GC GVFH+A+P ++DP+++++ PAV GT+N L+
Sbjct: 1 FRGDLLDGAALIDAARGCSGVFHLASPCIVDAVSDPQKQLIVPAVEGTLNVLR 159
>gb|BE359210.1|BE359210 DG1_39_C02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 603
Score = 95.9 bits (203), Expect(2) = 2e-032
Identities = 38/56 (67%), Positives = 43/56 (76%)
Frame = -2 / +3
Query: 276 DYPFISKESIYDMEHPAPMTSDKLKKLGWKVRPLKEPIAETVEFCQHAGFFEDVEG 109
D PFI+KESI D +HPAPMTSDKLK LGW RPL+E I +TVE CQ AGF + V G
Sbjct: 90 DNPFIAKESICDRDHPAPMTSDKLKNLGWSCRPLEETILDTVECCQRAGFLDGVAG 257
Score = 65.7 bits (137), Expect(2) = 2e-032
Identities = 24/30 (80%), Positives = 29/30 (96%)
Frame = -2 / +3
Query: 363 PQASGRHICAPHFISARDLLELLKTMYPDD 274
P+A+GRHICAPH ISARDLL+LLK+MYPD+
Sbjct: 6 PEAAGRHICAPHVISARDLLDLLKSMYPDN 95
>gb|BG240109.1|BG240109 OV1_18_A05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 458
Score = 128 bits (275), Expect(2) = 2e-032
Identities = 53/122 (43%), Positives = 73/122 (59%)
Frame = -2 / +3
Query: 813 TDPEREMLGPAVTGTINALKXXXXXXXXXXXXXXXXXXVEINPKDWPKDKIKDENCWSDK 634
T+P+ E++ PAVTGT N L+ V NP P D + DE+CWSD+
Sbjct: 18 TNPDVEIMAPAVTGTQNMLEASHAANVRRVVVVSSVAAVIANPTSIPDDAVADEDCWSDE 197
Query: 633 EFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPTLNTSCQFLVYFL 454
++CR +NWY ++K +E AL Y ++TG+DVVTV P V GPLLQPT+N + V +L
Sbjct: 198 DYCRATKNWYCLSKTVAEREALAYGERTGMDVVTVCPPWVLGPLLQPTVNATSMGFVKYL 377
Query: 453 KG 448
KG
Sbjct: 378 KG 383
Score = 32.2 bits (64), Expect(2) = 2e-032
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -2 / +3
Query: 429 DKLWHIVDVRDTADALLLVYE 367
+K ++VDVRD ADAL+L YE
Sbjct: 396 EKRRNMVDVRDVADALVLTYE 458
>gb|CN138545.1|CN138545 OX1_64_A03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_64_A03_A002 5', mRNA sequence
Length = 784
Score = 129 bits (277), Expect(3) = 1e-031
Identities = 54/85 (63%), Positives = 64/85 (75%)
Frame = -2 / +3
Query: 1083 GSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKA 904
G+ +T CVT A IASWLVK+LL +GYTV GTVR+ D K AHLK L+ A+E L L KA
Sbjct: 351 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKA 530
Query: 903 DVLDYDAMAGAVAGCQGVFHVATPV 829
D+LDYDA+ AV GCQGVFH A+PV
Sbjct: 531 DLLDYDAICRAVQGCQGVFHTASPV 605
Score = 24.4 bits (47), Expect(3) = 1e-031
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2 / +3
Query: 669 DKIKDENCWSD 637
D + DE+CWSD
Sbjct: 750 DVVVDESCWSD 782
Score = 22.6 bits (43), Expect(3) = 1e-031
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / +3
Query: 816 ITDPEREMLGPAVTGT 769
+TD +M+ PAV GT
Sbjct: 603 VTDDPEQMVEPAVRGT 650
>gb|CF482349.1|CF482349 POL1_6_A05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_6_A05_A002 5', mRNA sequence
Length = 782
Score = 107 bits (229), Expect(2) = 1e-031
Identities = 43/123 (34%), Positives = 68/123 (55%)
Frame = -2 / +2
Query: 816 ITDPEREMLGPAVTGTINALKXXXXXXXXXXXXXXXXXXVEINPKDWPKDKIKDENCWSD 637
+ DP+ E+L PAV GT+N L V N K + DE ++D
Sbjct: 320 VKDPKAELLDPAVKGTLNVLGSCKKASITKVVITSSMAAVSYNEKPRTPEVTVDETWFTD 499
Query: 636 KEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPTLNTSCQFLVYF 457
+ C + WY ++K +E+AA ++++ G ++VT+NPA+V GPLLQPTLNTS + ++
Sbjct: 500 PQICEKTQQWYVLSKTLAEQAAWKFSRDNGFEIVTINPAMVIGPLLQPTLNTSAEAILKL 679
Query: 456 LKG 448
+ G
Sbjct: 680 ING 688
Score = 51.0 bits (105), Expect(2) = 1e-031
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = -2 / +2
Query: 963 KTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATP 832
KT HL L+ A + L LFKA +L+ + AV GC VFH A+P
Sbjct: 176 KTLHLTALDGAKDRLHLFKASLLEEGSFDAAVHGCDTVFHTASP 307
>gb|CB925802.1|CB925802 ABA1_23_F05.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_23_F05_A012 5', mRNA sequence
Length = 645
Score = 58.8 bits (122), Expect(4) = 1e-031
Identities = 19/52 (36%), Positives = 35/52 (67%)
Frame = -2 / +3
Query: 681 DWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVN 526
+WP K+ D++CW+D E + + WYSV+K +E+AA ++A++ L + +N
Sbjct: 489 NWPPGKVIDDDCWADVELLKKLQLWYSVSKTLAEKAAWDFAEKEELQIAVLN 644
Score = 54.2 bits (112), Expect(4) = 1e-031
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = -2 / +3
Query: 1065 CVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSD 967
CVT A I SWLV+ LL RGYTVH TV++L D
Sbjct: 108 CVTGASGFIGSWLVRCLLDRGYTVHATVKNLQD 206
Score = 46.9 bits (96), Expect(4) = 1e-031
Identities = 17/47 (36%), Positives = 31/47 (65%)
Frame = -2 / +3
Query: 969 DNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATPV 829
+ +T HL+ + A L+LF+ D++D ++ A+ G GVFH+A+P+
Sbjct: 207 EGETKHLQAMGGADARLRLFQMDLVDPASVQPAIEGAHGVFHLASPM 347
Score = 34.1 bits (68), Expect(4) = 1e-031
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -2 / +3
Query: 810 DPEREMLGPAVTGTINALK 754
DPE+E+L PAV GT+N L+
Sbjct: 363 DPEKELLEPAVKGTLNVLR 419
>gb|CB925645.1|CB925645 ABA1_22_G02.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_22_G02_A012 5', mRNA sequence
Length = 582
Score = 75.3 bits (158), Expect(3) = 5e-031
Identities = 29/72 (40%), Positives = 51/72 (70%)
Frame = -2 / +3
Query: 969 DNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPEREML 790
+++T HL+ ++ A+ L+LF+ D+L+ ++ AV G +GVFHVA+PV + DPE E++
Sbjct: 198 ESETKHLQAMDGANSRLRLFQMDLLEPASIRPAVEGARGVFHVASPVILHRAQDPENELV 377
Query: 789 GPAVTGTINALK 754
PA+ GT++ L+
Sbjct: 378 EPALKGTLSVLR 413
Score = 58.3 bits (121), Expect(3) = 5e-031
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = -2 / +3
Query: 1092 EAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSD 967
+ G + CVT I SWLV+LLL RGYTVH TV++L D
Sbjct: 72 DGGGGSSLVCVTGGSGFIGSWLVRLLLGRGYTVHATVKNLQD 197
Score = 40.9 bits (83), Expect(3) = 5e-031
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2 / +3
Query: 678 WPKDKIKDENCWSDKEFCRNEENWYSVAK 592
WP DK+ DE+ W+D E + + WY+V+K
Sbjct: 486 WPADKVVDEDSWADIEQLKKLQLWYNVSK 572
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,422,065,637
Number of Sequences: 832831
Number of extensions: 21510412
Number of successful extensions: 162958
Number of sequences better than 1.0e-020: 126
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 40585412744
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)