TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4679577.2.1
(833 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW056944.1|CW056944 104_298_10517953_114_30151 Sorghum m... 339 e-102
gb|CD227568.1|CD227568 CCC1_52_A02.b1_A007 Callus culture/c... 359 3e-098
gb|CW324492.1|CW324492 104_819_11477191_148_35910_030 Sorgh... 339 4e-092
gb|CW363965.1|CW363965 fsbb001f035m22f0 Sorghum methylation... 339 4e-092
gb|CW405242.1|CW405242 fsbb001f097l13f0 Sorghum methylation... 166 3e-085
gb|CX610007.1|CX610007 ANR1_16_C10.b1_A002 Anaerobic roots ... 162 2e-082
gb|CD227591.1|CD227591 CCC1_52_A02.g1_A007 Callus culture/c... 298 8e-080
gb|AW922776.1|AW922776 DG1_46_C01.g1_A002 Dark Grown 1 (DG1... 162 1e-077
gb|CX613448.1|CX613448 GABR1_8_E12.b1_A002 GA- or brassinol... 162 1e-076
gb|AY047607.1| Sorghum bicolor chitinase-B mRNA, partial cds 149 1e-075
gb|AY047608.1| Sorghum bicolor chitinase-B1 mRNA, complete cds 149 9e-075
gb|CN132942.1|CN132942 OX1_9_D11.b1_A002 Oxidatively-stress... 150 1e-073
gb|BE918012.1|BE918012 OV1_8_G11.g1_A002 Ovary 1 (OV1) Sorg... 150 5e-072
gb|CD223183.1|CD223183 CCC1_26_G01.g1_A007 Callus culture/c... 150 7e-072
gb|AF402939.1|AF402939 Sorghum halepense chitinase-B gene, ... 151 2e-070
gb|CW489486.1|CW489486 fsbb001f274h04f0 Sorghum methylation... 179 3e-070
gb|BG049497.1|BG049497 OV1_20_G04.g1_A002 Ovary 1 (OV1) Sor... 179 3e-070
gb|AF402938.1|AF402938 Sorghum arundinaceum chitinase-B gen... 149 8e-070
gb|CN133023.1|CN133023 OX1_9_D11.g1_A002 Oxidatively-stress... 150 2e-069
gb|CN151360.1|CN151360 WOUND1_75_B02.b1_A002 Wounded leaves... 162 2e-068
gb|AY048375.1| Sorghum bicolor chitinase-B gene, partial cds 145 2e-068
gb|CW275250.1|CW275250 104_748_11404861_148_35382_055 Sorgh... 153 3e-068
gb|BE918591.1|BE918591 OV1_8_G11.b1_A002 Ovary 1 (OV1) Sorg... 150 4e-067
gb|CD226631.1|CD226631 CCC1_47_H05.b1_A007 Callus culture/c... 149 8e-066
gb|BE363714.1|BE363714 WS1_69_C06.g2_A002 Water-stressed 1 ... 149 1e-065
gb|CD222353.1|CD222353 CCC1_21_F09.b1_A007 Callus culture/c... 149 1e-065
gb|CD221995.1|CD221995 CCC1_1_C09.b1_A007 Callus culture/ce... 149 1e-065
gb|AW680953.1|AW680953 WS1_9_A06.b1_A002 Water-stressed 1 (... 149 1e-065
gb|BE357811.1|BE357811 DG1_22_D10.g1_A002 Dark Grown 1 (DG1... 162 4e-065
gb|CD225895.1|CD225895 CCC1_42_B03.b1_A007 Callus culture/c... 147 7e-065
gb|BE363379.1|BE363379 WS1_62_C05.g1_A002 Water-stressed 1 ... 150 1e-064
gb|BG101749.1|BG101749 EM1_5_G10.b1_A002 Embryo 1 (EM1) Sor... 149 3e-064
gb|CD423411.1|CD423411 SA1_23_C09.b1_A002 Salicylic acid-tr... 155 3e-064
gb|CW150339.1|CW150339 104_549_11142974_116_36302_051 Sorgh... 162 1e-063
gb|AW924229.1|AW924229 WS1_51_H04.b1_A002 Water-stressed 1 ... 162 1e-063
gb|CW318996.1|CW318996 104_811_11474252_116_35881_074 Sorgh... 159 9e-063
gb|BE359997.1|BE359997 DG1_60_H07.g2_A002 Dark Grown 1 (DG1... 159 9e-063
gb|CW357974.1|CW357974 fsbb001f024n22k0 Sorghum methylation... 153 5e-061
gb|AW746018.1|AW746018 WS1_38_H11.g1_A002 Water-stressed 1 ... 150 6e-061
gb|CD224094.1|CD224094 CCC1_32_C12.b1_A007 Callus culture/c... 150 6e-061
gb|CD226332.1|CD226332 CCC1_45_F08.b1_A007 Callus culture/c... 150 6e-061
gb|BG102665.1|BG102665 RHIZ2_35_G08.g1_A003 Rhizome2 (RHIZ2... 193 2e-060
gb|CD464022.1|CD464022 ETH1_48_G10.b1_A002 Ethylene-treated... 149 3e-060
gb|CW448428.1|CW448428 fsbb001f182a11k0 Sorghum methylation... 153 4e-060
gb|CW400945.1|CW400945 fsbb001f091i05f0 Sorghum methylation... 129 2e-059
gb|CD220272.1|CD220272 CCC1_66_G11.b1_A007 Callus culture/c... 146 3e-059
gb|CX613534.1|CX613534 GABR1_8_E12.g1_A002 GA- or brassinol... 162 3e-059
gb|CW365833.1|CW365833 fsbb001f038i18k0 Sorghum methylation... 150 8e-059
gb|CL160722.1|CL160722 104_351_10805186_116_31825_242 Sorgh... 150 8e-059
gb|CD226807.1|CD226807 CCC1_48_C11.b1_A007 Callus culture/c... 150 8e-059
gb|CD228493.1|CD228493 CCC1_8_E11.b1_A007 Callus culture/ce... 150 8e-059
gb|CX610094.1|CX610094 ANR1_16_C10.g1_A002 Anaerobic roots ... 159 3e-058
gb|CX616381.1|CX616381 GABR1_27_C09.g1_A002 GA- or brassino... 159 3e-058
gb|AW922735.1|AW922735 DG1_45_B06.g1_A002 Dark Grown 1 (DG1... 149 6e-058
gb|AW746695.1|AW746695 WS1_54_E02.g1_A002 Water-stressed 1 ... 149 6e-058
gb|AW924422.1|AW924422 WS1_69_C06.b1_A002 Water-stressed 1 ... 149 6e-058
gb|AW745819.1|AW745819 WS1_37_H11.g1_A002 Water-stressed 1 ... 146 1e-057
gb|CN151443.1|CN151443 WOUND1_75_B02.g1_A002 Wounded leaves... 160 2e-057
gb|CW150340.1|CW150340 104_549_11142974_148_36301_051 Sorgh... 162 4e-057
gb|BG049053.1|BG049053 OV1_22_F09.g1_A002 Ovary 1 (OV1) Sor... 135 5e-057
gb|CW400946.1|CW400946 fsbb001f091i05k0 Sorghum methylation... 220 3e-056
gb|CD432114.1|CD432114 ETH1_26_H07.b1_A002 Ethylene-treated... 141 6e-056
gb|CW302450.1|CW302450 104_786_11464725_116_35662_085 Sorgh... 150 8e-056
gb|CD220455.1|CD220455 CCC1_67_F06.b1_A007 Callus culture/c... 142 9e-056
gb|CD227859.1|CD227859 CCC1_56_F04.b1_A007 Callus culture/c... 140 4e-055
gb|CD228687.1|CD228687 CCC1_9_D03.b1_A007 Callus culture/ce... 140 4e-055
gb|CD226496.1|CD226496 CCC1_46_E08.b1_A007 Callus culture/c... 140 4e-055
gb|CD223269.1|CD223269 CCC1_27_E04.b1_A007 Callus culture/c... 140 4e-055
gb|CD228140.1|CD228140 CCC1_6_E03.b1_A007 Callus culture/ce... 140 4e-055
gb|BG556500.1|BG556500 EM1_37_H12.g1_A002 Embryo 1 (EM1) So... 140 4e-055
gb|CD221392.1|CD221392 CCC1_54_C04.b1_A007 Callus culture/c... 138 1e-054
gb|CD224145.1|CD224145 CCC1_32_A09.b1_A007 Callus culture/c... 138 2e-054
gb|CD225586.1|CD225586 CCC1_40_H10.b1_A007 Callus culture/c... 140 2e-054
gb|CW098317.1|CW098317 104_464_11002941_148_34366_083 Sorgh... 137 3e-054
gb|CN134928.1|CN134928 OX1_29_A10.g1_A002 Oxidatively-stres... 149 4e-054
gb|CW066077.1|CW066077 104_313_10523499_114_30148 Sorghum m... 128 6e-053
gb|CD229477.1|CD229477 CCC1_16_C07.b1_A007 Callus culture/c... 134 9e-053
gb|CD222930.1|CD222930 CCC1_25_F06.b1_A007 Callus culture/c... 146 8e-052
gb|CD220568.1|CD220568 CCC1_68_B04.b1_A007 Callus culture/c... 122 2e-050
gb|CW088904.1|CW088904 104_434_10948392_114_32602_096 Sorgh... 149 2e-050
gb|BE362915.2|BE362915 DG1_90_E12.g1_A002 Dark Grown 1 (DG1... 122 3e-050
gb|CD223155.1|CD223155 CCC1_26_G01.b1_A007 Callus culture/c... 122 3e-050
gb|CW039394.1|CW039394 104_272_10505475_115_30390 Sorghum m... 122 7e-050
gb|CW324491.1|CW324491 104_819_11477191_116_35914_030 Sorgh... 198 1e-049
gb|CD229267.1|CD229267 CCC1_14_D09.b1_A007 Callus culture/c... 121 2e-049
gb|CN129927.1|CN129927 RHOH1_38_F07.b1_A002 Acid- and alkal... 136 8e-049
gb|CN135214.1|CN135214 OX1_31_G02.b1_A002 Oxidatively-stres... 102 2e-048
gb|CN134927.1|CN134927 OX1_29_A09.g1_A002 Oxidatively-stres... 123 8e-048
gb|CD423525.1|CD423525 SA1_23_C09.g1_A002 Salicylic acid-tr... 148 1e-047
gb|BE357733.1|BE357733 DG1_22_D10.b1_A002 Dark Grown 1 (DG1... 190 2e-047
gb|CD464127.1|CD464127 ETH1_48_G10.g1_A002 Ethylene-treated... 133 2e-047
gb|DQ190424.1| Sorghum halepense isolate hal6 chitinase-B (... 149 2e-047
gb|CW350033.1|CW350033 fsbb001f011c12f0 Sorghum methylation... 138 2e-046
gb|CW284180.1|CW284180 104_760_11409637_148_35487_049 Sorgh... 138 2e-046
gb|CW445566.1|CW445566 fsbb001f170m12f0 Sorghum methylation... 138 2e-046
gb|CW464036.1|CW464036 fsbb001f213a24k0 Sorghum methylation... 138 2e-046
gb|BG464391.1|BG464391 EM1_69_B11.g1_A002 Embryo 1 (EM1) So... 130 2e-046
gb|DQ190423.1| Sorghum halepense isolate hal4 chitinase-B (... 145 2e-046
gb|CN135290.1|CN135290 OX1_31_G02.g1_A002 Oxidatively-stres... 102 2e-045
gb|DQ190422.1| Sorghum halepense isolate hal3 chitinase-B (... 142 2e-045
gb|AW678309.1|AW678309 WS1_14_G01.g1_A002 Water-stressed 1 ... 105 1e-044
gb|CW117036.1|CW117036 104_493_11107443_148_34610_016 Sorgh... 153 1e-044
gb|CW159279.1|CW159279 104_565_11149276_116_36410_010 Sorgh... 103 3e-044
gb|CW265113.1|CW265113 104_734_11231683_116_35257_076 Sorgh... 97 8e-044
gb|CW388025.1|CW388025 fsbb001f072j20k0 Sorghum methylation... 76 9e-044
gb|CW110423.1|CW110423 104_483_11103696_148_34524_094 Sorgh... 122 2e-043
gb|BG463695.1|BG463695 EM1_50_H02.g1_A002 Embryo 1 (EM1) So... 100 5e-043
gb|CN137269.1|CN137269 OX1_56_F03.b1_A002 Oxidatively-stres... 130 6e-043
gb|CW430429.1|CW430429 fsbb001f144c05k0 Sorghum methylation... 130 9e-043
gb|CN130014.1|CN130014 RHOH1_38_F07.g1_A002 Acid- and alkal... 136 4e-042
gb|CD226725.1|CD226725 CCC1_47_H05.g1_A007 Callus culture/c... 143 5e-042
gb|CW204755.1|CW204755 104_632_11186715_116_37060_002 Sorgh... 122 5e-042
gb|CW493211.1|CW493211 fsbb001f283n22k0 Sorghum methylation... 141 8e-042
gb|CN137353.1|CN137353 OX1_56_F03.g1_A002 Oxidatively-stres... 130 3e-041
gb|CN130329.1|CN130329 RHOH1_40_F08.g1_A002 Acid- and alkal... 130 3e-041
gb|CW430428.1|CW430428 fsbb001f144c05f0 Sorghum methylation... 130 3e-041
gb|CN130255.1|CN130255 RHOH1_40_F08.b1_A002 Acid- and alkal... 123 1e-040
gb|CW200665.1|CW200665 104_626_11184168_148_36867_092 Sorgh... 115 2e-040
gb|CW363966.1|CW363966 fsbb001f035m22k0 Sorghum methylation... 166 6e-040
gb|CD227445.1|CD227445 CCC1_51_E06.g1_A007 Callus culture/c... 108 1e-039
gb|CW265114.1|CW265114 104_734_11231683_148_35261_076 Sorgh... 91 4e-039
gb|CD229358.1|CD229358 CCC1_14_E11.g1_A007 Callus culture/c... 105 9e-039
gb|CN130309.1|CN130309 RHOH1_40_D04.g1_A002 Acid- and alkal... 67 1e-038
gb|CD222883.1|CD222883 CCC1_24_C04.g1_A007 Callus culture/c... 101 4e-038
gb|CD221556.1|CD221556 CCC1_55_F09.g1_A007 Callus culture/c... 101 6e-038
gb|CD226424.1|CD226424 CCC1_45_F08.g1_A007 Callus culture/c... 102 6e-038
gb|CW425870.1|CW425870 fsbb001f137a05f0 Sorghum methylation... 159 7e-038
gb|CD226602.1|CD226602 CCC1_46_E08.g1_A007 Callus culture/c... 101 1e-037
gb|CD229356.1|CD229356 CCC1_14_A10.g1_A007 Callus culture/c... 105 1e-037
gb|CD222500.1|CD222500 CCC1_22_B03.b1_A007 Callus culture/c... 98 1e-037
gb|CL191324.1|CL191324 104_410_10906720_114_32533_060 Sorgh... 97 3e-037
gb|CD432211.1|CD432211 ETH1_26_H07.g1_A002 Ethylene-treated... 100 4e-037
gb|CD223234.1|CD223234 CCC1_26_D09.g1_A007 Callus culture/c... 98 5e-037
gb|CW307372.1|CW307372 104_795_11468105_148_35736_073 Sorgh... 115 7e-037
gb|CD228683.1|CD228683 CCC1_9_D11.b1_A007 Callus culture/ce... 96 9e-037
gb|AW746206.1|AW746206 WS1_40_B10.b1_A002 Water-stressed 1 ... 88 1e-036
gb|CD228603.1|CD228603 CCC1_8_E11.g1_A007 Callus culture/ce... 98 1e-036
gb|CD229697.1|CD229697 CCC1_18_D08.g1_A007 Callus culture/c... 96 2e-036
gb|CD223041.1|CD223041 CCC1_25_F06.g1_A007 Callus culture/c... 96 2e-036
gb|CD222724.1|CD222724 CCC1_23_G10.g1_A007 Callus culture/c... 100 2e-036
gb|CW263590.1|CW263590 104_731_11230799_148_35217_082 Sorgh... 132 4e-036
gb|AW745790.1|AW745790 WS1_37_H11.b1_A002 Water-stressed 1 ... 108 4e-036
gb|CD222097.1|CD222097 CCC1_2_C04.b1_A007 Callus culture/ce... 96 6e-036
gb|CD220668.1|CD220668 CCC1_68_B04.g1_A007 Callus culture/c... 95 8e-036
gb|CD226002.1|CD226002 CCC1_42_B03.g1_A007 Callus culture/c... 95 1e-035
gb|CD223379.1|CD223379 CCC1_27_E04.g1_A007 Callus culture/c... 93 1e-035
gb|CD222476.1|CD222476 CCC1_22_B04.b1_A007 Callus culture/c... 98 3e-035
gb|CW119449.1|CW119449 104_496_11108775_116_34638_058 Sorgh... 96 3e-035
gb|CD229365.1|CD229365 CCC1_14_D09.g1_A007 Callus culture/c... 90 7e-035
gb|CD223848.1|CD223848 CCC1_30_F03.g1_A007 Callus culture/c... 90 9e-035
gb|CD221837.1|CD221837 CCC1_71_F05.b1_A007 Callus culture/c... 95 2e-034
gb|CD220604.1|CD220604 CCC1_68_C10.b1_A007 Callus culture/c... 96 2e-034
gb|CD229563.1|CD229563 CCC1_16_C07.g1_A007 Callus culture/c... 90 8e-034
gb|CW206617.1|CW206617 104_635_11187687_116_36961_058 Sorgh... 103 9e-034
gb|CW285685.1|CW285685 104_763_11410466_148_35506_013 Sorgh... 144 1e-033
gb|CD220381.1|CD220381 CCC1_66_G11.g1_A007 Callus culture/c... 86 2e-033
gb|CW388024.1|CW388024 fsbb001f072j20f0 Sorghum methylation... 76 2e-033
gb|CW231901.1|CW231901 104_681_11211372_148_37350_042 Sorgh... 144 2e-033
gb|CD463973.1|CD463973 ETH1_47_H03.g1_A002 Ethylene-treated... 96 3e-033
gb|CD222029.1|CD222029 CCC1_1_C09.g1_A007 Callus culture/ce... 84 4e-033
gb|CD220480.1|CD220480 CCC1_67_F06.g1_A007 Callus culture/c... 84 4e-033
gb|CD220708.1|CD220708 CCC1_68_C10.g1_A007 Callus culture/c... 84 4e-033
gb|CD227763.1|CD227763 CCC1_53_C09.g1_A007 Callus culture/c... 84 4e-033
gb|CD463839.1|CD463839 ETH1_47_H03.b1_A002 Ethylene-treated... 96 4e-033
gb|CF486597.1|CF486597 POL1_38_D07.g1_A002 Pollen Sorghum b... 102 6e-033
gb|BE358239.1|BE358239 DG1_26_D03.b2_A002 Dark Grown 1 (DG1... 73 7e-033
gb|CW159280.1|CW159280 104_565_11149276_148_36409_010 Sorgh... 90 2e-032
gb|CD226858.1|CD226858 CCC1_48_E04.g1_A007 Callus culture/c... 82 2e-032
gb|CD462568.1|CD462568 ETH1_38_G06.g1_A002 Ethylene-treated... 80 8e-032
gb|AW922596.1|AW922596 DG1_46_C01.b1_A002 Dark Grown 1 (DG1... 69 8e-032
gb|CD431984.1|CD431984 ETH1_12_F04.b1_A002 Ethylene-treated... 98 3e-031
gb|CD222692.1|CD222692 CCC1_23_G09.g1_A007 Callus culture/c... 82 3e-031
gb|BE597800.1|BE597800 PI1_65_E11.g1_A002 Pathogen induced ... 104 5e-031
gb|AW924442.1|AW924442 WS1_69_C06.g1_A002 Water-stressed 1 ... 96 5e-031
gb|CD228252.1|CD228252 CCC1_6_E03.g1_A007 Callus culture/ce... 77 7e-031
gb|BE598085.1|BE598085 PI1_65_E11.b1_A002 Pathogen induced ... 103 9e-031
gb|CD221665.1|CD221665 CCC1_70_G05.b1_A007 Callus culture/c... 96 3e-030
gb|CW488277.1|CW488277 fsbb001f254j12f0 Sorghum methylation... 103 2e-029
gb|CF770982.1|CF770982 DSBF1_12_D05.g1_A010 Drought-stresse... 96 2e-029
gb|CD223669.1|CD223669 CCC1_29_G02.g1_A007 Callus culture/c... 71 4e-029
gb|CD224981.1|CD224981 CCC1_37_D02.g1_A007 Callus culture/c... 71 4e-029
gb|CD220677.1|CD220677 CCC1_68_C11.g1_A007 Callus culture/c... 71 4e-029
gb|CD225687.1|CD225687 CCC1_40_B05.g1_A007 Callus culture/c... 71 4e-029
gb|BZ338038.1|BZ338038 ia92e12.b1 WGS-SbicolorF (JM107 adap... 76 9e-029
gb|CW437319.1|CW437319 fsbb001f154g03k0 Sorghum methylation... 90 9e-029
gb|CD229903.1|CD229903 CCC1_20_C03.g1_A007 Callus culture/c... 82 1e-028
gb|CW069060.1|CW069060 104_318_10525580_1_30095 Sorghum met... 85 2e-028
gb|BG649146.1|BG649146 EM1_56_F01.b1_A002 Embryo 1 (EM1) So... 68 2e-028
gb|AW287001.2|AW287001 LG1_264_C03.b1_A002 Light Grown 1 (L... 127 3e-028
gb|CW046146.1|CW046146 104_283_10509998_114_30137 Sorghum m... 126 6e-028
gb|CD228270.1|CD228270 CCC1_6_F02.g1_A007 Callus culture/ce... 68 6e-028
gb|CW276618.1|CW276618 104_750_11405587_148_35398_074 Sorgh... 76 1e-027
gb|BG464063.1|BG464063 EM1_69_B11.b1_A002 Embryo 1 (EM1) So... 78 1e-027
gb|CD228767.1|CD228767 CCC1_9_D11.g1_A007 Callus culture/ce... 64 3e-027
gb|CL161206.1|CL161206 104_352_10805558_116_31827_230 Sorgh... 80 6e-027
gb|BE367523.1|BE367523 PI1_8_E06.g1_A002 Pathogen induced 1... 86 2e-025
gb|CD229825.1|CD229825 CCC1_19_F11.g1_A007 Callus culture/c... 57 4e-025
gb|CW280673.1|CW280673 104_756_11407748_148_35454_080 Sorgh... 100 1e-024
gb|CW204756.1|CW204756 104_632_11186715_148_36922_002 Sorgh... 73 2e-023
gb|BG102992.1|BG102992 RHIZ2_35_G08.b1_A003 Rhizome2 (RHIZ2... 105 2e-023
gb|CD429983.1|CD429983 ETH1_16_A10.g1_A002 Ethylene-treated... 72 1e-022
gb|CW246023.1|CW246023 104_706_11221179_148_37598_002 Sorgh... 106 3e-022
gb|CD222193.1|CD222193 CCC1_2_C04.g1_A007 Callus culture/ce... 45 1e-021
gb|CD220577.1|CD220577 CCC1_68_C11.b1_A007 Callus culture/c... 96 1e-021
gb|AW672289.1|AW672289 LG1_358_A05.b1_A002 Light Grown 1 (L... 62 2e-021
gb|CD432032.1|CD432032 ETH1_12_F04.g1_A002 Ethylene-treated... 45 3e-021
gb|CF486513.1|CF486513 POL1_38_D07.b1_A002 Pollen Sorghum b... 62 3e-021
>gb|CW056944.1|CW056944 104_298_10517953_114_30151 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10517953, DNA
sequence
Length = 652
Score = 339 bits (734), Expect(2) = e-102
Identities = 128/151 (84%), Positives = 140/151 (92%)
Frame = +2 / -1
Query: 260 IKFCYINEIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGD 439
++FCYINEIDGPSKNYCD NNT+WPCQAGKGYYGRGPLQISWN+NYGPAGQSIGFDGLGD
Sbjct: 481 VEFCYINEIDGPSKNYCDANNTEWPCQAGKGYYGRGPLQISWNYNYGPAGQSIGFDGLGD 302
Query: 440 PDAVARSAVLAFRSALWYWMNNVHGAIVSGQGFGATIRAINGALECDGKNPNSVNNRVAY 619
PDAVARSAV+AFR+ALWYWMN+VHG VSGQGFGATIRAINGALECDGKNP+SVN+RVAY
Sbjct: 301 PDAVARSAVVAFRAALWYWMNSVHGVFVSGQGFGATIRAINGALECDGKNPDSVNDRVAY 122
Query: 620 YKQFCQDFGVDPGNNLTC*MFSLSLGCCPVL 712
YKQFCQDFGVDPG+NLTC* + C V+
Sbjct: 121 YKQFCQDFGVDPGSNLTC**LTSCTSCVDVV 29
Score = 294 bits (636), Expect(2) = 2e-086
Identities = 125/137 (91%), Positives = 126/137 (91%)
Frame = -3 / +3
Query: 675 QQVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKPWPETMAPCTLFI 496
Q VRLLPGSTPKSWQNCL**ATR LTE GFLPSHSSAPLMARMVAPKP PET PCTLFI
Sbjct: 66 QHVRLLPGSTPKSWQNCL**ATRSLTESGFLPSHSSAPLMARMVAPKPCPETKTPCTLFI 245
Query: 495 QYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP*YPFPAWHGHCVLF 316
QYQSA RNA+TALRATASGSPSPSKPMLCPAGP*L F EICSGPRP*YPFPAWHGH VLF
Sbjct: 246 QYQSAARNATTALRATASGSPSPSKPMLCPAGP*L*FHEICSGPRP*YPFPAWHGHSVLF 425
Query: 315 RSQ*FLLGPSISLM*QN 265
SQ*FLLGPSISLM*QN
Sbjct: 426 ASQ*FLLGPSISLM*QN 476
Score = 104 bits (221), Expect(2) = 1e-025
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = +1 / -3
Query: 262 KVLLHQRDRRAEQELLRPEQHAVAVPGGEGVLRPRPAADLLELQLRARGAEH 417
+VLLHQRDRRAEQELLR EQH VAVPGGE VLR RPAADL+ELQLRA GAEH
Sbjct: 479 RVLLHQRDRRAEQELLRREQHGVAVPGGERVLRARPAADLVELQLRAGGAEH 324
Score = 55.1 bits (114), Expect(2) = e-102
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2 / -3
Query: 197 GTVDDSKREIAAFFGNANHETI 262
GTVDDSKREIAAFFGNANHETI
Sbjct: 650 GTVDDSKREIAAFFGNANHETI 585
Score = 46.9 bits (96), Expect(2) = 2e-086
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3 / +1
Query: 261 MVSWLALPKKAAISRLESST 202
MVSWLALPKKAAISRLESST
Sbjct: 586 MVSWLALPKKAAISRLESST 645
Score = 35.9 bits (72), Expect(2) = 1e-025
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1 / -3
Query: 625 AVLPGFRRRPGQQPH 669
AVLPGFRRRP +QPH
Sbjct: 116 AVLPGFRRRPRKQPH 72
>gb|CD227568.1|CD227568 CCC1_52_A02.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_52_A02_A007 3', mRNA sequence
Length = 618
Score = 359 bits (779), Expect = 3e-098
Identities = 137/158 (86%), Positives = 147/158 (93%)
Frame = +2 / +1
Query: 239 GNANHETIKFCYINEIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSI 418
GNANHETIKFCYINEIDGPSKNYCD NNT+WPCQAGKGYYGRGPLQISWN+NYGPAGQSI
Sbjct: 1 GNANHETIKFCYINEIDGPSKNYCDANNTEWPCQAGKGYYGRGPLQISWNYNYGPAGQSI 180
Query: 419 GFDGLGDPDAVARSAVLAFRSALWYWMNNVHGAIVSGQGFGATIRAINGALECDGKNPNS 598
GFDGLGDPDAVARSAV+AFR+ALWYWMN+VHG VSGQGFGATIRAINGALECDGKNP+S
Sbjct: 181 GFDGLGDPDAVARSAVVAFRAALWYWMNSVHGVFVSGQGFGATIRAINGALECDGKNPDS 360
Query: 599 VNNRVAYYKQFCQDFGVDPGNNLTC*MFSLSLGCCPVL 712
VN+RVAYYKQFCQDFGVDPG+NLTC* + C V+
Sbjct: 361 VNDRVAYYKQFCQDFGVDPGSNLTC**LTSCTSCVDVV 474
Score = 319 bits (691), Expect = 3e-086
Identities = 139/175 (79%), Positives = 144/175 (82%)
Frame = -3 / -2
Query: 765 PKHPHHAIAIYPSTNTCVSTGQQPNERENIQQVRLLPGSTPKSWQNCL**ATRLLTELGF 586
P H H I + ++T Q + Q VRLLPGSTPKSWQNCL**ATR LTE GF
Sbjct: 527 PTHTSHTIHTTKPNHIHMTTSTQLVHDVSHQHVRLLPGSTPKSWQNCL**ATRSLTESGF 348
Query: 585 LPSHSSAPLMARMVAPKPWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCP 406
LPSHSSAPLMARMVAPKP PET PCTLFIQYQSA RNA+TALRATASGSPSPSKPMLCP
Sbjct: 347 LPSHSSAPLMARMVAPKPCPETKTPCTLFIQYQSAARNATTALRATASGSPSPSKPMLCP 168
Query: 405 AGP*LKFQEICSGPRP*YPFPAWHGHCVLFRSQ*FLLGPSISLM*QNFMVSWLAL 241
AGP*L F EICSGPRP*YPFPAWHGH VLF SQ*FLLGPSISLM*QNFMVSWLAL
Sbjct: 167 AGP*L*FHEICSGPRP*YPFPAWHGHSVLFASQ*FLLGPSISLM*QNFMVSWLAL 3
Score = 105 bits (224), Expect(2) = 5e-026
Identities = 46/52 (88%), Positives = 47/52 (90%)
Frame = +1 / +3
Query: 262 KVLLHQRDRRAEQELLRPEQHAVAVPGGEGVLRPRPAADLLELQLRARGAEH 417
KVLLHQRDRRAEQELLR EQH VAVPGGE VLR RPAADL+ELQLRA GAEH
Sbjct: 24 KVLLHQRDRRAEQELLRREQHGVAVPGGERVLRARPAADLVELQLRAGGAEH 179
Score = 35.9 bits (72), Expect(2) = 5e-026
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1 / +3
Query: 625 AVLPGFRRRPGQQPH 669
AVLPGFRRRP +QPH
Sbjct: 387 AVLPGFRRRPRKQPH 431
>gb|CW324492.1|CW324492 104_819_11477191_148_35910_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477191, DNA
sequence
Length = 720
Score = 339 bits (734), Expect = 4e-092
Identities = 128/151 (84%), Positives = 140/151 (92%)
Frame = +2 / +3
Query: 260 IKFCYINEIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGD 439
++FCYINEIDGPSKNYCD NNT+WPCQAGKGYYGRGPLQISWN+NYGPAGQSIGFDGLGD
Sbjct: 57 VEFCYINEIDGPSKNYCDANNTEWPCQAGKGYYGRGPLQISWNYNYGPAGQSIGFDGLGD 236
Query: 440 PDAVARSAVLAFRSALWYWMNNVHGAIVSGQGFGATIRAINGALECDGKNPNSVNNRVAY 619
PDAVARSAV+AFR+ALWYWMN+VHG VSGQGFGATIRAINGALECDGKNP+SVN+RVAY
Sbjct: 237 PDAVARSAVVAFRAALWYWMNSVHGVFVSGQGFGATIRAINGALECDGKNPDSVNDRVAY 416
Query: 620 YKQFCQDFGVDPGNNLTC*MFSLSLGCCPVL 712
YKQFCQDFGVDPG+NLTC* + C V+
Sbjct: 417 YKQFCQDFGVDPGSNLTC**LTSCTSCVDVV 509
Score = 298 bits (646), Expect = 6e-080
Identities = 131/167 (78%), Positives = 136/167 (81%)
Frame = -3 / -3
Query: 765 PKHPHHAIAIYPSTNTCVSTGQQPNERENIQQVRLLPGSTPKSWQNCL**ATRLLTELGF 586
P H H I + ++T Q + Q VRLLPGSTPKSWQNCL**ATR LTE GF
Sbjct: 562 PTHNLHTIHTTKPNHIHMTTSTQLVHDVSHQHVRLLPGSTPKSWQNCL**ATRSLTESGF 383
Query: 585 LPSHSSAPLMARMVAPKPWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCP 406
LPSHSSAPLMARMVAPKP PET PCTLFIQYQSA RNA+TALRATASGSPSPSKPMLCP
Sbjct: 382 LPSHSSAPLMARMVAPKPCPETKTPCTLFIQYQSAARNATTALRATASGSPSPSKPMLCP 203
Query: 405 AGP*LKFQEICSGPRP*YPFPAWHGHCVLFRSQ*FLLGPSISLM*QN 265
AGP*L F EICSGPRP*YPFPAWHGH VLF SQ*FLLGPSISLM*QN
Sbjct: 202 AGP*L*FHEICSGPRP*YPFPAWHGHSVLFASQ*FLLGPSISLM*QN 62
Score = 104 bits (221), Expect(2) = 1e-025
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = +1 / +2
Query: 262 KVLLHQRDRRAEQELLRPEQHAVAVPGGEGVLRPRPAADLLELQLRARGAEH 417
+VLLHQRDRRAEQELLR EQH VAVPGGE VLR RPAADL+ELQLRA GAEH
Sbjct: 59 RVLLHQRDRRAEQELLRREQHGVAVPGGERVLRARPAADLVELQLRAGGAEH 214
Score = 35.9 bits (72), Expect(2) = 1e-025
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1 / +2
Query: 625 AVLPGFRRRPGQQPH 669
AVLPGFRRRP +QPH
Sbjct: 422 AVLPGFRRRPRKQPH 466
>gb|CW363965.1|CW363965 fsbb001f035m22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f035m22, DNA
sequence
Length = 690
Score = 339 bits (734), Expect = 4e-092
Identities = 128/151 (84%), Positives = 140/151 (92%)
Frame = +2 / -3
Query: 260 IKFCYINEIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGD 439
++FCYINEIDGPSKNYCD NNT+WPCQAGKGYYGRGPLQISWN+NYGPAGQSIGFDGLGD
Sbjct: 574 VEFCYINEIDGPSKNYCDANNTEWPCQAGKGYYGRGPLQISWNYNYGPAGQSIGFDGLGD 395
Query: 440 PDAVARSAVLAFRSALWYWMNNVHGAIVSGQGFGATIRAINGALECDGKNPNSVNNRVAY 619
PDAVARSAV+AFR+ALWYWMN+VHG VSGQGFGATIRAINGALECDGKNP+SVN+RVAY
Sbjct: 394 PDAVARSAVVAFRAALWYWMNSVHGVFVSGQGFGATIRAINGALECDGKNPDSVNDRVAY 215
Query: 620 YKQFCQDFGVDPGNNLTC*MFSLSLGCCPVL 712
YKQFCQDFGVDPG+NLTC* + C V+
Sbjct: 214 YKQFCQDFGVDPGSNLTC**LTSCTSCVDVV 122
Score = 298 bits (646), Expect = 6e-080
Identities = 131/167 (78%), Positives = 136/167 (81%)
Frame = -3 / +3
Query: 765 PKHPHHAIAIYPSTNTCVSTGQQPNERENIQQVRLLPGSTPKSWQNCL**ATRLLTELGF 586
P H H I + ++T Q + Q VRLLPGSTPKSWQNCL**ATR LTE GF
Sbjct: 69 PTHNLHTIHTTKPNHIHMTTSTQLVHDVSHQHVRLLPGSTPKSWQNCL**ATRSLTESGF 248
Query: 585 LPSHSSAPLMARMVAPKPWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCP 406
LPSHSSAPLMARMVAPKP PET PCTLFIQYQSA RNA+TALRATASGSPSPSKPMLCP
Sbjct: 249 LPSHSSAPLMARMVAPKPCPETKTPCTLFIQYQSAARNATTALRATASGSPSPSKPMLCP 428
Query: 405 AGP*LKFQEICSGPRP*YPFPAWHGHCVLFRSQ*FLLGPSISLM*QN 265
AGP*L F EICSGPRP*YPFPAWHGH VLF SQ*FLLGPSISLM*QN
Sbjct: 429 AGP*L*FHEICSGPRP*YPFPAWHGHSVLFASQ*FLLGPSISLM*QN 569
Score = 104 bits (221), Expect(2) = 1e-025
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = +1 / -2
Query: 262 KVLLHQRDRRAEQELLRPEQHAVAVPGGEGVLRPRPAADLLELQLRARGAEH 417
+VLLHQRDRRAEQELLR EQH VAVPGGE VLR RPAADL+ELQLRA GAEH
Sbjct: 572 RVLLHQRDRRAEQELLRREQHGVAVPGGERVLRARPAADLVELQLRAGGAEH 417
Score = 35.9 bits (72), Expect(2) = 1e-025
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1 / -2
Query: 625 AVLPGFRRRPGQQPH 669
AVLPGFRRRP +QPH
Sbjct: 209 AVLPGFRRRPRKQPH 165
>gb|CW405242.1|CW405242 fsbb001f097l13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f097l13, DNA
sequence
Length = 641
Score = 166 bits (356), Expect(3) = 3e-085
Identities = 67/82 (81%), Positives = 68/82 (82%)
Frame = +2 / +3
Query: 17 CQSGPCDVPETNNASVASIVTPXXXXXXXXXXXXSCEANGFYTRDAFLAAAGYYPAFGRT 196
CQSGPCDVP TNN SVASIVTP SCEANGFYTRDAFLAAAGYYP+FGRT
Sbjct: 54 CQSGPCDVPATNNVSVASIVTPAFFDALLAQAAASCEANGFYTRDAFLAAAGYYPSFGRT 233
Query: 197 GTVDDSKREIAAFFGNANHETI 262
GTVDDSKREIAAFFGNANHETI
Sbjct: 234 GTVDDSKREIAAFFGNANHETI 299
Score = 160 bits (343), Expect(3) = 3e-085
Identities = 56/61 (91%), Positives = 60/61 (98%)
Frame = +2 / +1
Query: 260 IKFCYINEIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGD 439
++FCYINEIDGPSKNYCD NNT+WPCQAGKGYYGRGPLQISWN+NYGPAGQSIGFDGLGD
Sbjct: 403 VEFCYINEIDGPSKNYCDANNTEWPCQAGKGYYGRGPLQISWNYNYGPAGQSIGFDGLGD 582
Query: 440 P 442
P
Sbjct: 583 P 585
Score = 134 bits (287), Expect(4) = 5e-054
Identities = 55/59 (93%), Positives = 55/59 (93%)
Frame = -3 / -1
Query: 441 GSPSPSKPMLCPAGP*LKFQEICSGPRP*YPFPAWHGHCVLFRSQ*FLLGPSISLM*QN 265
GSPSPSKPMLCPAGP*L F EICSGPRP*YPFPAWHGH VLF SQ*FLLGPSISLM*QN
Sbjct: 584 GSPSPSKPMLCPAGP*L*FHEICSGPRP*YPFPAWHGHSVLFASQ*FLLGPSISLM*QN 408
Score = 104 bits (221), Expect(2) = 3e-030
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = +1 / +3
Query: 262 KVLLHQRDRRAEQELLRPEQHAVAVPGGEGVLRPRPAADLLELQLRARGAEH 417
+VLLHQRDRRAEQELLR EQH VAVPGGE VLR RPAADL+ELQLRA GAEH
Sbjct: 405 RVLLHQRDRRAEQELLRREQHGVAVPGGERVLRARPAADLVELQLRAGGAEH 560
Score = 57.9 bits (120), Expect(4) = 5e-054
Identities = 25/42 (59%), Positives = 26/42 (61%)
Frame = -3 / -2
Query: 141 *KPLXXXXXXXXXXXXXXXAGVTMLATDALLVSGTSQGPDWH 16
*KPL AGVTMLATD LLV+GTSQGPDWH
Sbjct: 178 *KPLASQEAAACARSASKKAGVTMLATDTLLVAGTSQGPDWH 53
Score = 51.5 bits (106), Expect(2) = 3e-030
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 10 RRVPVGPLRRAGDQQRVRGQH 72
R VPVGPLRRAGDQQRVRGQH
Sbjct: 47 RHVPVGPLRRAGDQQRVRGQH 109
Score = 46.9 bits (96), Expect(4) = 5e-054
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3 / -2
Query: 261 MVSWLALPKKAAISRLESST 202
MVSWLALPKKAAISRLESST
Sbjct: 298 MVSWLALPKKAAISRLESST 239
Score = 30.4 bits (60), Expect(3) = 3e-085
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 441 PTRWRAAPCSRS 476
PTRWRAAP SRS
Sbjct: 585 PTRWRAAPSSRS 620
Score = 30.4 bits (60), Expect(4) = 5e-054
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -2 / -2
Query: 487 ERGAEREHGAARHRVG 440
ER ER+ GAARHRVG
Sbjct: 631 ERRPERDDGAARHRVG 584
>gb|CX610007.1|CX610007 ANR1_16_C10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_16_C10_A002 3', mRNA sequence
Length = 714
Score = 162 bits (349), Expect(4) = 2e-082
Identities = 58/77 (75%), Positives = 68/77 (88%)
Frame = +2 / +3
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD + TQWPC AG+ YYGRGPLQISWN+NYGPAGQSIGFDGLG+PDAVA+ AV+AF++A
Sbjct: 297 YCDSSYTQWPCAAGQKYYGRGPLQISWNYNYGPAGQSIGFDGLGNPDAVAQDAVIAFKAA 476
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+WMNNVHG + G G
Sbjct: 477 LWFWMNNVHGVMPQGFG 527
Score = 120 bits (257), Expect(3) = 4e-032
Identities = 56/79 (70%), Positives = 57/79 (72%)
Frame = -3 / -3
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLFIQ QSA NA TA ATASG PSPSKPMLCPAGP*L F EIC GP P*
Sbjct: 526 PNPCGITPCTLFIQNQSAALNAITASCATASGFPSPSKPMLCPAGP*L*FHEICRGPLP* 347
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHCV SQ* L
Sbjct: 346 YFCPAAHGHCV*LESQ*AL 290
Score = 102 bits (218), Expect(4) = 2e-082
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +2 / +3
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+G NP +N RV YYKQ+CQ FGVDPG+NLTC*
Sbjct: 507 VMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQFGVDPGSNLTC* 662
Score = 62.0 bits (129), Expect(4) = 2e-082
Identities = 25/43 (58%), Positives = 31/43 (72%)
Frame = +2 / +3
Query: 161 AAAGYYPAFGRTGTVDDSKREIAAFFGNANHETIKFCYINEID 289
A+A Y F + G+ DD KREIAAFF +A HET FCYI+EI+
Sbjct: 156 ASASAYSGFAQGGSEDDGKREIAAFFAHATHETGHFCYISEIN 284
Score = 37.7 bits (76), Expect(4) = 2e-082
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2 / +3
Query: 50 NNASVASIVTPXXXXXXXXXXXXSCEANGFYTRDAFLAAA 169
+ A+V ++VT CE + FY+RDAFL+AA
Sbjct: 39 SGANVGNVVTDAFFNGIKNQAGSGCEGSNFYSRDAFLSAA 158
Score = 34.1 bits (68), Expect(3) = 4e-032
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -3 / -3
Query: 285 ISLM*QNFMVSWLALPKKAAISRLESST 202
ISLM*Q VS +A KKAAISRL SS+
Sbjct: 280 ISLM*QKCPVSCVA*AKKAAISRLPSSS 197
Score = 23.1 bits (44), Expect(3) = 4e-032
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -2
Query: 673 AGEVVARVDAEI 638
AGEV RVDAE+
Sbjct: 659 AGEVAPRVDAEL 624
>gb|CD227591.1|CD227591 CCC1_52_A02.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_52_A02_A007 5', mRNA sequence
Length = 619
Score = 298 bits (645), Expect = 8e-080
Identities = 114/132 (86%), Positives = 117/132 (88%)
Frame = +2 / +2
Query: 17 CQSGPCDVPETNNASVASIVTPXXXXXXXXXXXXSCEANGFYTRDAFLAAAGYYPAFGRT 196
CQSGPCDVP TNN SVASIVTP SCEANGFYTRDAFLAAAGYYP+FGRT
Sbjct: 224 CQSGPCDVPATNNVSVASIVTPAFFDALLAQAAASCEANGFYTRDAFLAAAGYYPSFGRT 403
Query: 197 GTVDDSKREIAAFFGNANHETIKFCYINEIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQ 376
GTVDDSKREIAAFFGNANHETIKFCYINEIDGPSKNYCD NNT+WPCQAGKGYYGRGPLQ
Sbjct: 404 GTVDDSKREIAAFFGNANHETIKFCYINEIDGPSKNYCDANNTEWPCQAGKGYYGRGPLQ 583
Query: 377 ISWNFNYGPAGQ 412
ISWN+NYGPAGQ
Sbjct: 584 ISWNYNYGPAGQ 619
Score = 156 bits (336), Expect(2) = 2e-048
Identities = 66/70 (94%), Positives = 66/70 (94%)
Frame = -3 / -2
Query: 411 CPAGP*LKFQEICSGPRP*YPFPAWHGHCVLFRSQ*FLLGPSISLM*QNFMVSWLALPKK 232
CPAGP*L F EICSGPRP*YPFPAWHGH VLF SQ*FLLGPSISLM*QNFMVSWLALPKK
Sbjct: 618 CPAGP*L*FHEICSGPRP*YPFPAWHGHSVLFASQ*FLLGPSISLM*QNFMVSWLALPKK 439
Query: 231 AAISRLESST 202
AAISRLESST
Sbjct: 438 AAISRLESST 409
Score = 99.6 bits (211), Expect(2) = 6e-029
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = +1 / +1
Query: 262 KVLLHQRDRRAEQELLRPEQHAVAVPGGEGVLRPRPAADLLELQLRARGA 411
KVLLHQRDRRAEQELLR EQH VAVPGGE VLR RPAADL+ELQLRA GA
Sbjct: 469 KVLLHQRDRRAEQELLRREQHGVAVPGGERVLRARPAADLVELQLRAGGA 618
Score = 57.9 bits (120), Expect(2) = 2e-048
Identities = 25/42 (59%), Positives = 26/42 (61%)
Frame = -3 / -2
Query: 141 *KPLXXXXXXXXXXXXXXXAGVTMLATDALLVSGTSQGPDWH 16
*KPL AGVTMLATD LLV+GTSQGPDWH
Sbjct: 348 *KPLASHEAAACARSASKKAGVTMLATDTLLVAGTSQGPDWH 223
Score = 51.5 bits (106), Expect(2) = 6e-029
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1 / +1
Query: 10 RRVPVGPLRRAGDQQRVRGQH 72
R VPVGPLRRAGDQQRVRGQH
Sbjct: 217 RHVPVGPLRRAGDQQRVRGQH 279
>gb|AW922776.1|AW922776 DG1_46_C01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 737
Score = 162 bits (349), Expect(4) = 1e-077
Identities = 58/77 (75%), Positives = 68/77 (88%)
Frame = +2 / +1
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD + TQWPC AG+ YYGRGPLQISWN+NYGPAGQSIGFDGLG+PDAVA+ AV+AF++A
Sbjct: 169 YCDSSYTQWPCAAGQKYYGRGPLQISWNYNYGPAGQSIGFDGLGNPDAVAQDAVIAFKAA 348
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+WMNNVHG + G G
Sbjct: 349 LWFWMNNVHGVMPQGFG 399
Score = 120 bits (257), Expect(3) = 4e-032
Identities = 56/79 (70%), Positives = 57/79 (72%)
Frame = -3 / -1
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLFIQ QSA NA TA ATASG PSPSKPMLCPAGP*L F EIC GP P*
Sbjct: 398 PNPCGITPCTLFIQNQSAALNAITASCATASGFPSPSKPMLCPAGP*L*FHEICRGPLP* 219
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHCV SQ* L
Sbjct: 218 YFCPAAHGHCV*LESQ*AL 162
Score = 102 bits (218), Expect(4) = 1e-077
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +2 / +1
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+G NP +N RV YYKQ+CQ FGVDPG+NLTC*
Sbjct: 379 VMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQFGVDPGSNLTC* 534
Score = 62.0 bits (129), Expect(4) = 1e-077
Identities = 25/43 (58%), Positives = 31/43 (72%)
Frame = +2 / +1
Query: 161 AAAGYYPAFGRTGTVDDSKREIAAFFGNANHETIKFCYINEID 289
A+A Y F + G+ DD KREIAAFF +A HET FCYI+EI+
Sbjct: 28 ASASAYSGFAQGGSEDDGKREIAAFFAHATHETGHFCYISEIN 156
Score = 34.1 bits (68), Expect(3) = 4e-032
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -3 / -1
Query: 285 ISLM*QNFMVSWLALPKKAAISRLESST 202
ISLM*Q VS +A KKAAISRL SS+
Sbjct: 152 ISLM*QKCPVSCVA*AKKAAISRLPSSS 69
Score = 23.1 bits (44), Expect(3) = 4e-032
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -3
Query: 673 AGEVVARVDAEI 638
AGEV RVDAE+
Sbjct: 531 AGEVAPRVDAEL 496
Score = 22.1 bits (42), Expect(4) = 1e-077
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2 / +1
Query: 140 YTRDAFLAAA 169
Y+RDAFL+AA
Sbjct: 1 YSRDAFLSAA 30
>gb|CX613448.1|CX613448 GABR1_8_E12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_E12_A002 3', mRNA sequence
Length = 722
Score = 162 bits (349), Expect(3) = 1e-076
Identities = 58/77 (75%), Positives = 68/77 (88%)
Frame = +2 / +3
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD + TQWPC AG+ YYGRGPLQISWN+NYGPAGQSIGFDGLG+PDAVA+ AV+AF++A
Sbjct: 147 YCDSSYTQWPCAAGQKYYGRGPLQISWNYNYGPAGQSIGFDGLGNPDAVAQDAVIAFKAA 326
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+WMNNVHG + G G
Sbjct: 327 LWFWMNNVHGVMPQGFG 377
Score = 120 bits (257), Expect(3) = 4e-032
Identities = 56/79 (70%), Positives = 57/79 (72%)
Frame = -3 / -2
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLFIQ QSA NA TA ATASG PSPSKPMLCPAGP*L F EIC GP P*
Sbjct: 376 PNPCGITPCTLFIQNQSAALNAITASCATASGFPSPSKPMLCPAGP*L*FHEICRGPLP* 197
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHCV SQ* L
Sbjct: 196 YFCPAAHGHCV*LESQ*AL 140
Score = 102 bits (218), Expect(3) = 1e-076
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +2 / +3
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+G NP +N RV YYKQ+CQ FGVDPG+NLTC*
Sbjct: 357 VMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQFGVDPGSNLTC* 512
Score = 62.0 bits (129), Expect(3) = 1e-076
Identities = 25/43 (58%), Positives = 31/43 (72%)
Frame = +2 / +3
Query: 161 AAAGYYPAFGRTGTVDDSKREIAAFFGNANHETIKFCYINEID 289
A+A Y F + G+ DD KREIAAFF +A HET FCYI+EI+
Sbjct: 6 ASASAYSGFAQGGSEDDGKREIAAFFAHATHETGHFCYISEIN 134
Score = 34.1 bits (68), Expect(3) = 4e-032
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -3 / -2
Query: 285 ISLM*QNFMVSWLALPKKAAISRLESST 202
ISLM*Q VS +A KKAAISRL SS+
Sbjct: 130 ISLM*QKCPVSCVA*AKKAAISRLPSSS 47
Score = 23.1 bits (44), Expect(3) = 4e-032
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -1
Query: 673 AGEVVARVDAEI 638
AGEV RVDAE+
Sbjct: 509 AGEVAPRVDAEL 474
>gb|AY047607.1| Sorghum bicolor chitinase-B mRNA, partial cds
Length = 789
Score = 149 bits (321), Expect(5) = 1e-075
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +1
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG++IGF+GL +P+ VA+ AV+AF++A
Sbjct: 424 YCDSSNKQWPCAAGQKYYGRGPLQISWNYNYGPAGKAIGFNGLANPNKVAQDAVIAFKTA 603
Query: 485 LWYWMNNVHGAIVSGQG 535
LWYW NNVHG + G G
Sbjct: 604 LWYWTNNVHGVMSQGFG 654
Score = 113 bits (241), Expect(4) = 3e-044
Identities = 52/79 (65%), Positives = 55/79 (69%)
Frame = -3 / -2
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLF+QYQSA NA TA AT G SP KPM PAGP*L F EICSGPRP*
Sbjct: 653 PNPCDITPCTLFVQYQSAVLNAITASCATLFGFASPLKPMAFPAGP*L*FHEICSGPRP* 474
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 473 YFCPAAHGHCLLLESQ*AL 417
Score = 96.4 bits (204), Expect(5) = 1e-075
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +2 / +1
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+GKN +N RV YYKQ+C+ GVDPG NLTC*
Sbjct: 634 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYKQYCRQLGVDPGPNLTC* 789
Score = 63.4 bits (132), Expect(4) = 3e-044
Identities = 31/47 (65%), Positives = 31/47 (65%)
Frame = -3 / -2
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP Q CL** TR FLP HS APLMA MVAP P
Sbjct: 785 QVRLGPGSTPSCRQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 645
Score = 44.1 bits (90), Expect(5) = 1e-075
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2 / +1
Query: 215 KREIAAFFGNANHETIKFCYINEID 289
KREIAAFF + HET FCYI+EI+
Sbjct: 337 KREIAAFFAHVTHETGHFCYISEIN 411
Score = 44.1 bits (90), Expect(5) = 1e-075
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2 / +1
Query: 47 TNNASVASIVTPXXXXXXXXXXXXSCEANGFYTRDAFLAAAGYYPAFG 190
+ +V S+VT CE FYTR AFL+AA Y +FG
Sbjct: 175 SGGGNVGSVVTDAFFNGIKNQAASGCEGKNFYTRSAFLSAANSYKSFG 318
Score = 35.9 bits (72), Expect(4) = 3e-044
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = -3 / -2
Query: 285 ISLM*QNFMVSWLALPKKAAISRLESS 205
ISLM*Q VSW+ KKAAISRL ++
Sbjct: 407 ISLM*QKCPVSWVTWAKKAAISRLPAT 327
Score = 28.1 bits (55), Expect(4) = 3e-044
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3 / -2
Query: 54 LLVSGTSQGPDWHPAP 7
LL+ GPDWHP+P
Sbjct: 173 LLLPLERHGPDWHPSP 126
Score = 25.8 bits (50), Expect(5) = 1e-075
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2 / +1
Query: 8 GAGCQSGPC 34
G GCQSGPC
Sbjct: 127 GDGCQSGPC 153
>gb|AY047608.1| Sorghum bicolor chitinase-B1 mRNA, complete cds
Length = 819
Score = 149 bits (321), Expect(5) = 9e-075
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +1
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG++IGF+GL +P+ VA+ AV+AF++A
Sbjct: 454 YCDSSNKQWPCAAGQKYYGRGPLQISWNYNYGPAGKAIGFNGLANPNKVAQDAVIAFKTA 633
Query: 485 LWYWMNNVHGAIVSGQG 535
LWYW NNVHG + G G
Sbjct: 634 LWYWTNNVHGVMSQGFG 684
Score = 113 bits (241), Expect(4) = 8e-044
Identities = 52/79 (65%), Positives = 55/79 (69%)
Frame = -3 / -2
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLF+QYQSA NA TA AT G SP KPM PAGP*L F EICSGPRP*
Sbjct: 683 PNPCDITPCTLFVQYQSAVLNAITASCATLFGFASPLKPMAFPAGP*L*FHEICSGPRP* 504
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 503 YFCPAAHGHCLLLESQ*AL 447
Score = 93.6 bits (198), Expect(5) = 9e-075
Identities = 37/52 (71%), Positives = 41/52 (78%)
Frame = +2 / +1
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+GKN +N RV YYKQ+C+ GVDPG NL C*
Sbjct: 664 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYKQYCRQLGVDPGPNLIC* 819
Score = 62.0 bits (129), Expect(4) = 8e-044
Identities = 30/47 (63%), Positives = 31/47 (65%)
Frame = -3 / -2
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
Q+RL PGSTP Q CL** TR FLP HS APLMA MVAP P
Sbjct: 815 QMRLGPGSTPSCRQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 675
Score = 44.1 bits (90), Expect(5) = 9e-075
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2 / +1
Query: 215 KREIAAFFGNANHETIKFCYINEID 289
KREIAAFF + HET FCYI+EI+
Sbjct: 367 KREIAAFFAHVTHETGHFCYISEIN 441
Score = 44.1 bits (90), Expect(5) = 9e-075
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2 / +1
Query: 47 TNNASVASIVTPXXXXXXXXXXXXSCEANGFYTRDAFLAAAGYYPAFG 190
+ +V S+VT CE FYTR AFL+AA Y +FG
Sbjct: 205 SGGGNVGSVVTDAFFNGIKNQAASGCEGKNFYTRSAFLSAANSYKSFG 348
Score = 35.9 bits (72), Expect(4) = 8e-044
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = -3 / -2
Query: 285 ISLM*QNFMVSWLALPKKAAISRLESS 205
ISLM*Q VSW+ KKAAISRL ++
Sbjct: 437 ISLM*QKCPVSWVTWAKKAAISRLPAT 357
Score = 28.1 bits (55), Expect(4) = 8e-044
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3 / -2
Query: 54 LLVSGTSQGPDWHPAP 7
LL+ GPDWHP+P
Sbjct: 203 LLLPLERHGPDWHPSP 156
Score = 25.8 bits (50), Expect(5) = 9e-075
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2 / +1
Query: 8 GAGCQSGPC 34
G GCQSGPC
Sbjct: 157 GDGCQSGPC 183
>gb|CN132942.1|CN132942 OX1_9_D11.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_9_D11_A002 3', mRNA sequence
Length = 812
Score = 150 bits (323), Expect(4) = 1e-073
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +2 / +3
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG+ IGFDGL +PD VA+ AV+AF++A
Sbjct: 258 YCDSSNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFDGLRNPDRVAQDAVVAFKTA 437
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+W NNVHG + G G
Sbjct: 438 LWFWTNNVHGVMSQGFG 488
Score = 111 bits (238), Expect(3) = 7e-042
Identities = 52/79 (65%), Positives = 56/79 (70%)
Frame = -3 / -2
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTL +Q QSA NA+TA AT SG SPSKPM PAGP*L F EICSGPRP*
Sbjct: 487 PNPCDITPCTLLVQNQSAVLNATTASCATLSGFRSPSKPMSLPAGP*L*FHEICSGPRP* 308
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 307 YF*PAAHGHCLLLESQ*AL 251
Score = 98.2 bits (208), Expect(4) = 1e-073
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = +2 / +3
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC*MFSLSLGC 700
V QGFGATIRAINGALEC+GKN +N RV YY+Q+CQ GVDPG NLTC*+ +
Sbjct: 468 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYRQYCQQLGVDPGPNLTC*VARRAASA 647
Query: 701 CPV 709
P+
Sbjct: 648 SPL 656
Score = 69.8 bits (146), Expect(3) = 7e-042
Identities = 32/47 (68%), Positives = 32/47 (68%)
Frame = -3 / -2
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP WQ CL** TR FLP HS APLMA MVAP P
Sbjct: 619 QVRLGPGSTPSCWQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 479
Score = 44.1 bits (90), Expect(4) = 1e-073
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2 / +3
Query: 188 GRTGTVDDSKREIAAFFGNANHETIKFCYINEID 289
G G KREIAAFF + HET FCYI+EI+
Sbjct: 144 GFGGRSVQGKREIAAFFAHITHETGHFCYISEIN 245
Score = 42.8 bits (87), Expect(4) = 1e-073
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2 / +3
Query: 47 TNNASVASIVTPXXXXXXXXXXXXSCEANGFYTRDAFLAAAGYYPAFG 190
+ +VA +VT CE FYTR AFL+AA Y FG
Sbjct: 9 SGGGNVAGVVTDAFFNSIKNQAGNGCEGKNFYTRSAFLSAADAYKGFG 152
Score = 29.0 bits (57), Expect(3) = 7e-042
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -3 / -2
Query: 285 ISLM*QNFMVSWLALPKKAAISRL 214
ISLM*Q VS + KKAAISRL
Sbjct: 241 ISLM*QKCPVSCVMWAKKAAISRL 170
>gb|BE918012.1|BE918012 OV1_8_G11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 710
Score = 150 bits (323), Expect(4) = 5e-072
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +2 / +2
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG+ IGFDGL +PD VA+ AV+AF++A
Sbjct: 197 YCDSSNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFDGLRNPDRVAQDAVVAFKTA 376
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+W NNVHG + G G
Sbjct: 377 LWFWTNNVHGVMSQGFG 427
Score = 111 bits (238), Expect(3) = 7e-042
Identities = 52/79 (65%), Positives = 56/79 (70%)
Frame = -3 / -3
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTL +Q QSA NA+TA AT SG SPSKPM PAGP*L F EICSGPRP*
Sbjct: 426 PNPCDITPCTLLVQNQSAVLNATTASCATLSGFRSPSKPMSLPAGP*L*FHEICSGPRP* 247
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 246 YF*PAAHGHCLLLESQ*AL 190
Score = 98.2 bits (208), Expect(4) = 5e-072
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = +2 / +2
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC*MFSLSLGC 700
V QGFGATIRAINGALEC+GKN +N RV YY+Q+CQ GVDPG NLTC*+ +
Sbjct: 407 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYRQYCQQLGVDPGPNLTC*VARRAASA 586
Query: 701 CPV 709
P+
Sbjct: 587 SPL 595
Score = 69.8 bits (146), Expect(3) = 7e-042
Identities = 32/47 (68%), Positives = 32/47 (68%)
Frame = -3 / -3
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP WQ CL** TR FLP HS APLMA MVAP P
Sbjct: 558 QVRLGPGSTPSCWQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 418
Score = 44.1 bits (90), Expect(4) = 5e-072
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2 / +2
Query: 188 GRTGTVDDSKREIAAFFGNANHETIKFCYINEID 289
G G KREIAAFF + HET FCYI+EI+
Sbjct: 83 GFGGRSVQGKREIAAFFAHITHETGHFCYISEIN 184
Score = 37.3 bits (75), Expect(4) = 5e-072
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +2 / +2
Query: 122 CEANGFYTRDAFLAAAGYYPAFG 190
CE FYTR AFL+AA Y FG
Sbjct: 23 CEGKNFYTRSAFLSAADAYKGFG 91
Score = 29.0 bits (57), Expect(3) = 7e-042
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -3 / -3
Query: 285 ISLM*QNFMVSWLALPKKAAISRL 214
ISLM*Q VS + KKAAISRL
Sbjct: 180 ISLM*QKCPVSCVMWAKKAAISRL 109
>gb|CD223183.1|CD223183 CCC1_26_G01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_26_G01_A007 5', mRNA sequence
Length = 662
Score = 150 bits (323), Expect(4) = 7e-072
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +2 / +1
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG+ IGFDGL +PD VA+ AV+AF++A
Sbjct: 208 YCDSSNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFDGLRNPDRVAQDAVVAFKTA 387
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+W NNVHG + G G
Sbjct: 388 LWFWTNNVHGVMSQGFG 438
Score = 111 bits (238), Expect(3) = 3e-041
Identities = 52/79 (65%), Positives = 56/79 (70%)
Frame = -3 / -1
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTL +Q QSA NA+TA AT SG SPSKPM PAGP*L F EICSGPRP*
Sbjct: 437 PNPCDITPCTLLVQNQSAVLNATTASCATLSGFRSPSKPMSLPAGP*L*FHEICSGPRP* 258
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 257 YF*PAAHGHCLLLESQ*AL 201
Score = 98.2 bits (208), Expect(4) = 7e-072
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = +2 / +1
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC*MFSLSLGC 700
V QGFGATIRAINGALEC+GKN +N RV YY+Q+CQ GVDPG NLTC*+ +
Sbjct: 418 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYRQYCQQLGVDPGPNLTC*VARRAASA 597
Query: 701 CPV 709
P+
Sbjct: 598 SPL 606
Score = 69.8 bits (146), Expect(3) = 3e-041
Identities = 32/47 (68%), Positives = 32/47 (68%)
Frame = -3 / -1
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP WQ CL** TR FLP HS APLMA MVAP P
Sbjct: 569 QVRLGPGSTPSCWQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 429
Score = 43.7 bits (89), Expect(4) = 7e-072
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2 / +1
Query: 188 GRTGTVDDSKREIAAFFGNANHETIKFCYINEID 289
G G KRE+AAFF + HET FCYI+EI+
Sbjct: 94 GFGGRSVQGKREVAAFFAHITHETGHFCYISEIN 195
Score = 37.3 bits (75), Expect(4) = 7e-072
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +2 / +1
Query: 122 CEANGFYTRDAFLAAAGYYPAFG 190
CE FYTR AFL+AA Y FG
Sbjct: 34 CEGKNFYTRSAFLSAADAYKGFG 102
Score = 26.7 bits (52), Expect(3) = 3e-041
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -3 / -1
Query: 285 ISLM*QNFMVSWLALPKKAAISRL 214
ISLM*Q VS + KKAA SRL
Sbjct: 191 ISLM*QKCPVSCVMWAKKAATSRL 120
>gb|AF402939.1|AF402939 Sorghum halepense chitinase-B gene, partial cds
Length = 922
Score = 151 bits (324), Expect(5) = 2e-070
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +2 / +2
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG+ IGFDGL +PD VA+ AV+AF++A
Sbjct: 557 YCDSSNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFDGLRNPDRVAQDAVIAFKTA 736
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+W NNVHG + G G
Sbjct: 737 LWFWTNNVHGVMSQGFG 787
Score = 110 bits (235), Expect(3) = 3e-039
Identities = 52/79 (65%), Positives = 55/79 (69%)
Frame = -3 / -2
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTL +Q QSA NA TA AT SG SPSKPM PAGP*L F EICSGPRP*
Sbjct: 786 PNPCDITPCTLLVQNQSAVLNAITASCATLSGFRSPSKPMSLPAGP*L*FHEICSGPRP* 607
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 606 YF*PAAHGHCLLLESQ*AL 550
Score = 96.8 bits (205), Expect(5) = 2e-070
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +2 / +2
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+GKN +N RV YY+Q+CQ GVDPG NLTC*
Sbjct: 767 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYRQYCQQLGVDPGPNLTC* 922
Score = 68.0 bits (142), Expect(3) = 3e-039
Identities = 31/47 (65%), Positives = 31/47 (65%)
Frame = -3 / -2
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP WQ CL** TR F P HS APLMA MVAP P
Sbjct: 918 QVRLGPGSTPSCWQYCL**PTRAFIWAVFFPLHSRAPLMALMVAPNP 778
Score = 44.1 bits (90), Expect(5) = 2e-070
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2 / +1
Query: 47 TNNASVASIVTPXXXXXXXXXXXXSCEANGFYTRDAFLAAAGYYPAFG 190
+ +VAS+VT CE FYTR AFL+AA Y FG
Sbjct: 172 SGGGNVASVVTDAFFNGIKNQAGNGCEGKNFYTRSAFLSAADAYKGFG 315
Score = 29.5 bits (58), Expect(5) = 2e-070
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2 / +1
Query: 215 KREIAAFFGNANHET 259
KREIAAFF + HET
Sbjct: 334 KREIAAFFAHVTHET 378
Score = 27.6 bits (54), Expect(3) = 3e-039
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3 / -3
Query: 54 LLVSGTSQGPDWHPAP 7
LL GPDWHP+P
Sbjct: 173 LLPPPERHGPDWHPSP 126
Score = 25.8 bits (50), Expect(5) = 2e-070
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2 / +1
Query: 8 GAGCQSGPC 34
G GCQSGPC
Sbjct: 127 GDGCQSGPC 153
>gb|CW489486.1|CW489486 fsbb001f274h04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f274h04, DNA
sequence
Length = 597
Score = 179 bits (386), Expect(2) = 3e-070
Identities = 63/90 (70%), Positives = 76/90 (84%)
Frame = +2 / +1
Query: 266 FCYINEIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPD 445
FCYINEI+G S+NYCD NN QWPC GK YYGRGPLQISWN+NYGPAG++IGFDGLG+PD
Sbjct: 4 FCYINEINGASRNYCDANNRQWPCAPGKKYYGRGPLQISWNYNYGPAGKAIGFDGLGNPD 183
Query: 446 AVARSAVLAFRSALWYWMNNVHGAIVSGQG 535
VA+ V++F++ALW+WMNNVH + G G
Sbjct: 184 KVAQDPVISFKTALWFWMNNVHQVMPQGFG 273
Score = 133 bits (285), Expect(2) = 3e-045
Identities = 63/89 (70%), Positives = 64/89 (71%)
Frame = -3 / -2
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P M CTLFIQ QSA N T AT SG PSPSKPM PAGP*L F EICSGPRP*
Sbjct: 272 PNPCGMTWCTLFIQNQSAVLNEITGSCATLSGFPSPSKPMAFPAGP*L*FHEICSGPRP* 93
Query: 354 YPFPAWHGHCVLFRSQ*FLLGPSISLM*Q 268
Y FP HGHC+LF SQ*FLL P ISLM*Q
Sbjct: 92 YFFPGAHGHCLLFASQ*FLLAPLISLM*Q 6
Score = 107 bits (228), Expect(2) = 3e-070
Identities = 42/60 (70%), Positives = 47/60 (78%)
Frame = +2 / +1
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC*MFSLSLGC 700
V QGFGATIRAINGALEC+GKNP +VN RV YYK +C+ FGVDPGNNLTC* + C
Sbjct: 253 VMPQGFGATIRAINGALECNGKNPGAVNARVGYYKDYCKQFGVDPGNNLTC*RCRVHRSC 432
Score = 70.3 bits (147), Expect(2) = 3e-045
Identities = 33/47 (70%), Positives = 33/47 (70%)
Frame = -3 / -2
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP Q L** TR T GFLP HS APLMARMVAP P
Sbjct: 404 QVRLFPGSTPNCLQ*SL**PTRAFTAPGFLPLHSRAPLMARMVAPNP 264
>gb|BG049497.1|BG049497 OV1_20_G04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 561
Score = 179 bits (386), Expect(2) = 3e-070
Identities = 63/90 (70%), Positives = 76/90 (84%)
Frame = +2 / +1
Query: 266 FCYINEIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPD 445
FCYINEI+G S+NYCD NN QWPC GK YYGRGPLQISWN+NYGPAG++IGFDGLG+PD
Sbjct: 1 FCYINEINGASRNYCDANNRQWPCAPGKKYYGRGPLQISWNYNYGPAGKAIGFDGLGNPD 180
Query: 446 AVARSAVLAFRSALWYWMNNVHGAIVSGQG 535
VA+ V++F++ALW+WMNNVH + G G
Sbjct: 181 KVAQDPVISFKTALWFWMNNVHQVMPQGFG 270
Score = 133 bits (285), Expect(2) = 3e-045
Identities = 63/89 (70%), Positives = 64/89 (71%)
Frame = -3 / -2
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P M CTLFIQ QSA N T AT SG PSPSKPM PAGP*L F EICSGPRP*
Sbjct: 269 PNPCGMTWCTLFIQNQSAVLNEITGSCATLSGFPSPSKPMAFPAGP*L*FHEICSGPRP* 90
Query: 354 YPFPAWHGHCVLFRSQ*FLLGPSISLM*Q 268
Y FP HGHC+LF SQ*FLL P ISLM*Q
Sbjct: 89 YFFPGAHGHCLLFASQ*FLLAPLISLM*Q 3
Score = 107 bits (228), Expect(2) = 3e-070
Identities = 42/60 (70%), Positives = 47/60 (78%)
Frame = +2 / +1
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC*MFSLSLGC 700
V QGFGATIRAINGALEC+GKNP +VN RV YYK +C+ FGVDPGNNLTC* + C
Sbjct: 250 VMPQGFGATIRAINGALECNGKNPGAVNARVGYYKDYCKQFGVDPGNNLTC*RCRVHRSC 429
Score = 70.3 bits (147), Expect(2) = 3e-045
Identities = 33/47 (70%), Positives = 33/47 (70%)
Frame = -3 / -2
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP Q L** TR T GFLP HS APLMARMVAP P
Sbjct: 401 QVRLFPGSTPNCLQ*SL**PTRAFTAPGFLPLHSRAPLMARMVAPNP 261
>gb|AF402938.1|AF402938 Sorghum arundinaceum chitinase-B gene, partial cds
Length = 922
Score = 149 bits (321), Expect(5) = 8e-070
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +2
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD + TQWPC AG+ YYGRGPLQISWN+NYGPAG++IGF+GL +P+ VA+ AV+AF++A
Sbjct: 557 YCDTSKTQWPCAAGQKYYGRGPLQISWNYNYGPAGKAIGFNGLANPNKVAQDAVIAFKTA 736
Query: 485 LWYWMNNVHGAIVSGQG 535
LWYW NNVHG + G G
Sbjct: 737 LWYWTNNVHGVMSQGFG 787
Score = 112 bits (239), Expect(4) = 1e-040
Identities = 52/77 (67%), Positives = 54/77 (70%)
Frame = -3 / -2
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLF+QYQSA NA TA AT G SP KPM PAGP*L F EICSGPRP*
Sbjct: 786 PNPCDITPCTLFVQYQSAVLNAITASCATLFGFASPLKPMAFPAGP*L*FHEICSGPRP* 607
Query: 354 YPFPAWHGHCVLFRSQ* 304
Y PA HGHCVL SQ*
Sbjct: 606 YFCPAAHGHCVLLVSQ* 556
Score = 96.4 bits (204), Expect(5) = 8e-070
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +2 / +2
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+GKN +N RV YYKQ+C+ GVDPG NLTC*
Sbjct: 767 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYKQYCRQLGVDPGPNLTC* 922
Score = 61.6 bits (128), Expect(4) = 1e-040
Identities = 30/47 (63%), Positives = 30/47 (63%)
Frame = -3 / -2
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP Q CL** TR F P HS APLMA MVAP P
Sbjct: 918 QVRLGPGSTPSCRQYCL**PTRAFIWAVFFPLHSRAPLMALMVAPNP 778
Score = 44.1 bits (90), Expect(5) = 8e-070
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2 / +1
Query: 47 TNNASVASIVTPXXXXXXXXXXXXSCEANGFYTRDAFLAAAGYYPAFG 190
+ +V S+VT CE FYTR AFL+AA Y +FG
Sbjct: 175 SGGGNVGSVVTDAFFNGIKNQAASGCEGKNFYTRSAFLSAANSYKSFG 318
Score = 29.5 bits (58), Expect(5) = 8e-070
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2 / +1
Query: 215 KREIAAFFGNANHET 259
KREIAAFF + HET
Sbjct: 337 KREIAAFFAHVTHET 381
Score = 28.1 bits (55), Expect(4) = 1e-040
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3 / -3
Query: 54 LLVSGTSQGPDWHPAP 7
LL+ GPDWHP+P
Sbjct: 173 LLLPLERHGPDWHPSP 126
Score = 27.2 bits (53), Expect(4) = 1e-040
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3 / -3
Query: 258 VSWLALPKKAAISRLESS 205
VSW+ KKAAISRL ++
Sbjct: 380 VSWVTWAKKAAISRLPAT 327
Score = 25.8 bits (50), Expect(5) = 8e-070
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2 / +1
Query: 8 GAGCQSGPC 34
G GCQSGPC
Sbjct: 127 GDGCQSGPC 153
>gb|CN133023.1|CN133023 OX1_9_D11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_9_D11_A002 5', mRNA sequence
Length = 837
Score = 150 bits (323), Expect(5) = 2e-069
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +2 / +2
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG+ IGFDGL +PD VA+ AV+AF++A
Sbjct: 500 YCDSSNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFDGLRNPDRVAQDAVVAFKTA 679
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+W NNVHG + G G
Sbjct: 680 LWFWTNNVHGVMSQGFG 730
Score = 111 bits (238), Expect(4) = 2e-039
Identities = 52/79 (65%), Positives = 56/79 (70%)
Frame = -3 / -1
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTL +Q QSA NA+TA AT SG SPSKPM PAGP*L F EICSGPRP*
Sbjct: 729 PNPCDITPCTLLVQNQSAVLNATTASCATLSGFRSPSKPMSLPAGP*L*FHEICSGPRP* 550
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 549 YF*PAAHGHCLLLESQ*AL 493
Score = 75.8 bits (159), Expect(5) = 2e-069
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = +2 / +2
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFG 646
V QGFGATIRAINGALEC+GKN +N RV YY+Q+CQ G
Sbjct: 710 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYRQYCQQLG 835
Score = 55.6 bits (115), Expect(4) = 2e-039
Identities = 25/39 (64%), Positives = 25/39 (64%)
Frame = -3 / -1
Query: 648 TPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
TP WQ CL** TR FLP HS APLMA MVAP P
Sbjct: 837 TPSCWQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 721
Score = 44.1 bits (90), Expect(5) = 2e-069
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2 / +2
Query: 188 GRTGTVDDSKREIAAFFGNANHETIKFCYINEID 289
G G KREIAAFF + HET FCYI+EI+
Sbjct: 386 GFGGRSVQGKREIAAFFAHITHETGHFCYISEIN 487
Score = 42.8 bits (87), Expect(5) = 2e-069
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2 / +2
Query: 47 TNNASVASIVTPXXXXXXXXXXXXSCEANGFYTRDAFLAAAGYYPAFG 190
+ +VA +VT CE FYTR AFL+AA Y FG
Sbjct: 251 SGGGNVAGVVTDAFFNSIKNQAGNGCEGKNFYTRSAFLSAADAYKGFG 394
Score = 29.0 bits (57), Expect(4) = 2e-039
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -3 / -1
Query: 285 ISLM*QNFMVSWLALPKKAAISRL 214
ISLM*Q VS + KKAAISRL
Sbjct: 483 ISLM*QKCPVSCVMWAKKAAISRL 412
Score = 27.6 bits (54), Expect(4) = 2e-039
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3 / -1
Query: 54 LLVSGTSQGPDWHPAP 7
LL GPDWHP+P
Sbjct: 252 LLPPPERHGPDWHPSP 205
Score = 25.8 bits (50), Expect(5) = 2e-069
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2 / +2
Query: 8 GAGCQSGPC 34
G GCQSGPC
Sbjct: 206 GDGCQSGPC 232
>gb|CN151360.1|CN151360 WOUND1_75_B02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_75_B02_A002 3', mRNA sequence
Length = 715
Score = 162 bits (349), Expect(3) = 2e-068
Identities = 58/77 (75%), Positives = 68/77 (88%)
Frame = +2 / +1
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD + TQWPC AG+ YYGRGPLQISWN+NYGPAGQSIGFDGLG+PDAVA+ AV+AF++A
Sbjct: 145 YCDSSYTQWPCAAGQKYYGRGPLQISWNYNYGPAGQSIGFDGLGNPDAVAQDAVIAFKAA 324
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+WMNNVHG + G G
Sbjct: 325 LWFWMNNVHGVMPQGFG 375
Score = 120 bits (257), Expect(2) = 2e-027
Identities = 56/79 (70%), Positives = 57/79 (72%)
Frame = -3 / -3
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLFIQ QSA NA TA ATASG PSPSKPMLCPAGP*L F EIC GP P*
Sbjct: 374 PNPCGITPCTLFIQNQSAALNAITASCATASGFPSPSKPMLCPAGP*L*FHEICRGPLP* 195
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHCV SQ* L
Sbjct: 194 YFCPAAHGHCV*LESQ*AL 138
Score = 102 bits (218), Expect(3) = 2e-068
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +2 / +1
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+G NP +N RV YYKQ+CQ FGVDPG+NLTC*
Sbjct: 355 VMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQFGVDPGSNLTC* 510
Score = 34.5 bits (69), Expect(3) = 2e-068
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2 / +1
Query: 179 PAFGRTGTVDDSKREIAAFFGNANHETIKFCYINEID 289
PA R + FF +A HET FCYI+EI+
Sbjct: 22 PASPRAARRTTASARSPPFFAHATHETGHFCYISEIN 132
Score = 23.1 bits (44), Expect(2) = 2e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -2
Query: 673 AGEVVARVDAEI 638
AGEV RVDAE+
Sbjct: 507 AGEVAPRVDAEL 472
>gb|AY048375.1| Sorghum bicolor chitinase-B gene, partial cds
Length = 927
Score = 145 bits (311), Expect(5) = 2e-068
Identities = 50/77 (64%), Positives = 64/77 (83%)
Frame = +2 / +1
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD + TQWPC AG+ YYGRGPL+ISW++NYGPAG+ IGF+GL +P+ VA+ AV+AF++A
Sbjct: 562 YCDSSKTQWPCAAGQKYYGRGPLKISWDYNYGPAGKGIGFNGLANPNKVAQDAVIAFKTA 741
Query: 485 LWYWMNNVHGAIVSGQG 535
LWYW NNVHG + G G
Sbjct: 742 LWYWTNNVHGVMSQGFG 792
Score = 104 bits (221), Expect(4) = 2e-038
Identities = 50/77 (64%), Positives = 52/77 (67%)
Frame = -3 / -2
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLF+QYQSA NA TA AT G SP KPM PAGP*L EI SGPRP*
Sbjct: 791 PNPCDITPCTLFVQYQSAVLNAITASCATLFGFASPLKPMPFPAGP*L*SHEIFSGPRP* 612
Query: 354 YPFPAWHGHCVLFRSQ* 304
Y PA HGHCVL SQ*
Sbjct: 611 YFCPAAHGHCVLLESQ* 561
Score = 96.4 bits (204), Expect(5) = 2e-068
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +2 / +1
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+GKN +N RV YYKQ+C+ GVDPG NLTC*
Sbjct: 772 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYKQYCRQLGVDPGPNLTC* 927
Score = 63.4 bits (132), Expect(4) = 2e-038
Identities = 31/47 (65%), Positives = 31/47 (65%)
Frame = -3 / -2
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP Q CL** TR FLP HS APLMA MVAP P
Sbjct: 923 QVRLGPGSTPSCRQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 783
Score = 44.1 bits (90), Expect(5) = 2e-068
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2 / +1
Query: 47 TNNASVASIVTPXXXXXXXXXXXXSCEANGFYTRDAFLAAAGYYPAFG 190
+ +V S+VT CE FYTR AFL+AA Y +FG
Sbjct: 175 SGGGNVGSVVTDAFFNGIKNQAASGCEGKNFYTRSAFLSAANSYKSFG 318
Score = 29.5 bits (58), Expect(5) = 2e-068
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2 / +1
Query: 215 KREIAAFFGNANHET 259
KREIAAFF + HET
Sbjct: 337 KREIAAFFAHVTHET 381
Score = 27.2 bits (53), Expect(4) = 2e-038
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -3 / -2
Query: 30 GPDWHPAP 7
GPDWHP+P
Sbjct: 149 GPDWHPSP 126
Score = 27.2 bits (53), Expect(4) = 2e-038
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3 / -2
Query: 258 VSWLALPKKAAISRLESS 205
VSW+ KKAAISRL ++
Sbjct: 380 VSWVTWAKKAAISRLPAT 327
Score = 25.8 bits (50), Expect(5) = 2e-068
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2 / +1
Query: 8 GAGCQSGPC 34
G GCQSGPC
Sbjct: 127 GDGCQSGPC 153
>gb|CW275250.1|CW275250 104_748_11404861_148_35382_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404861, DNA
sequence
Length = 627
Score = 153 bits (328), Expect(3) = 3e-068
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +2 / -1
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YC+ +N QWPC GK YYGRGPLQISWN+NYGPAG+ IGFDGLG+PD VA+ V+AF++A
Sbjct: 393 YCNSSNAQWPCAPGKKYYGRGPLQISWNYNYGPAGREIGFDGLGNPDMVAQDPVIAFKTA 214
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+WMNNVHG + G G
Sbjct: 213 LWFWMNNVHGVMPQGFG 163
Score = 113 bits (241), Expect(2) = 2e-038
Identities = 52/79 (65%), Positives = 54/79 (68%)
Frame = -3 / +2
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLFIQ QSA NA T AT SG PSPSKP+ PAGP*L F EICSGPRP*
Sbjct: 164 PNPCGITPCTLFIQNQSAVLNAITGSCATMSGFPSPSKPISLPAGP*L*FHEICSGPRP* 343
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y FP HGHC L Q* L
Sbjct: 344 YFFPGAHGHCALLELQ*AL 400
Score = 100 bits (213), Expect(3) = 3e-068
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = +2 / -1
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAI+GALEC+G NP +N RV YYKQ+CQ FGVDPGN+LTC*
Sbjct: 183 VMPQGFGATIRAIDGALECNGNNPAQMNARVGYYKQYCQQFGVDPGNSLTC* 28
Score = 68.0 bits (142), Expect(2) = 2e-038
Identities = 30/47 (63%), Positives = 30/47 (63%)
Frame = -3 / +2
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP WQ CL** TR G P HS AP MA MVAP P
Sbjct: 32 QVRLFPGSTPNCWQYCL**PTRAFICAGLFPLHSRAPSMALMVAPNP 172
Score = 48.7 bits (100), Expect(3) = 3e-068
Identities = 20/33 (60%), Positives = 22/33 (66%)
Frame = +2 / -3
Query: 161 AAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
AA+ YPAF GT D KREIAAFF + HET
Sbjct: 622 AASSSYPAFAHGGTEADGKREIAAFFAHVTHET 524
>gb|BE918591.1|BE918591 OV1_8_G11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 618
Score = 150 bits (323), Expect(4) = 4e-067
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +2 / +3
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG+ IGFDGL +PD VA+ AV+AF++A
Sbjct: 279 YCDSSNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFDGLRNPDRVAQDAVVAFKTA 458
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+W NNVHG + G G
Sbjct: 459 LWFWTNNVHGVMSQGFG 509
Score = 111 bits (238), Expect(3) = 5e-037
Identities = 52/79 (65%), Positives = 56/79 (70%)
Frame = -3 / -3
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTL +Q QSA NA+TA AT SG SPSKPM PAGP*L F EICSGPRP*
Sbjct: 508 PNPCDITPCTLLVQNQSAVLNATTASCATLSGFRSPSKPMSLPAGP*L*FHEICSGPRP* 329
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 328 YF*PAAHGHCLLLESQ*AL 272
Score = 76.2 bits (160), Expect(4) = 4e-067
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = +2 / +3
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGV 649
V QGFGATIRAINGALEC+GKN +N RV YY Q+CQ GV
Sbjct: 489 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYXQYCQQLGV 617
Score = 53.3 bits (110), Expect(3) = 5e-037
Identities = 24/39 (61%), Positives = 24/39 (61%)
Frame = -3 / -3
Query: 648 TPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
TP WQ C ** TR FLP HS APLMA MVAP P
Sbjct: 616 TPSCWQYCX**PTRAFIWAVFLPLHSRAPLMALMVAPNP 500
Score = 44.1 bits (90), Expect(4) = 4e-067
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2 / +3
Query: 188 GRTGTVDDSKREIAAFFGNANHETIKFCYINEID 289
G G KREIAAFF + HET FCYI+EI+
Sbjct: 165 GFGGRSVQGKREIAAFFAHITHETGHFCYISEIN 266
Score = 42.8 bits (87), Expect(4) = 4e-067
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2 / +3
Query: 47 TNNASVASIVTPXXXXXXXXXXXXSCEANGFYTRDAFLAAAGYYPAFG 190
+ +VA +VT CE FYTR AFL+AA Y FG
Sbjct: 30 SGGGNVAGVVTDAFFNSIKNQAGNGCEGKNFYTRSAFLSAADAYKGFG 173
Score = 29.0 bits (57), Expect(3) = 5e-037
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -3 / -3
Query: 285 ISLM*QNFMVSWLALPKKAAISRL 214
ISLM*Q VS + KKAAISRL
Sbjct: 262 ISLM*QKCPVSCVMWAKKAAISRL 191
>gb|CD226631.1|CD226631 CCC1_47_H05.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_47_H05_A007 3', mRNA sequence
Length = 658
Score = 149 bits (321), Expect(3) = 8e-066
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +3
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG++IGF+GL +P+ VA+ AV+AF++A
Sbjct: 123 YCDSSNKQWPCAAGQKYYGRGPLQISWNYNYGPAGKAIGFNGLANPNKVAQDAVIAFKTA 302
Query: 485 LWYWMNNVHGAIVSGQG 535
LWYW NNVHG + G G
Sbjct: 303 LWYWTNNVHGVMSQGFG 353
Score = 113 bits (241), Expect(3) = 1e-042
Identities = 52/79 (65%), Positives = 55/79 (69%)
Frame = -3 / -1
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLF+QYQSA NA TA AT G SP KPM PAGP*L F EICSGPRP*
Sbjct: 352 PNPCDITPCTLFVQYQSAVLNAITASCATLFGFASPLKPMAFPAGP*L*FHEICSGPRP* 173
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 172 YFCPAAHGHCLLLESQ*AL 116
Score = 96.4 bits (204), Expect(3) = 8e-066
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +2 / +3
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+GKN +N RV YYKQ+C+ GVDPG NLTC*
Sbjct: 333 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYKQYCRQLGVDPGPNLTC* 488
Score = 63.4 bits (132), Expect(3) = 1e-042
Identities = 31/47 (65%), Positives = 31/47 (65%)
Frame = -3 / -1
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP Q CL** TR FLP HS APLMA MVAP P
Sbjct: 484 QVRLGPGSTPSCRQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 344
Score = 45.1 bits (92), Expect(3) = 8e-066
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +2 / +3
Query: 209 DSKREIAAFFGNANHETIKFCYINEID 289
+ KREIAAFF + HET FCYI+EI+
Sbjct: 30 EGKREIAAFFAHVTHETGHFCYISEIN 110
Score = 36.8 bits (74), Expect(3) = 1e-042
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -3 / -1
Query: 285 ISLM*QNFMVSWLALPKKAAISRLES 208
ISLM*Q VSW+ KKAAISRL S
Sbjct: 106 ISLM*QKCPVSWVTWAKKAAISRLPS 29
>gb|BE363714.1|BE363714 WS1_69_C06.g2_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 705
Score = 149 bits (321), Expect(3) = 1e-065
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +1
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG++IGF+GL +P+ VA+ AV+AF++A
Sbjct: 103 YCDSSNKQWPCAAGQKYYGRGPLQISWNYNYGPAGKAIGFNGLANPNKVAQDAVIAFKTA 282
Query: 485 LWYWMNNVHGAIVSGQG 535
LWYW NNVHG + G G
Sbjct: 283 LWYWTNNVHGVMSQGFG 333
Score = 113 bits (241), Expect(3) = 2e-042
Identities = 52/79 (65%), Positives = 55/79 (69%)
Frame = -3 / -2
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLF+QYQSA NA TA AT G SP KPM PAGP*L F EICSGPRP*
Sbjct: 332 PNPCDITPCTLFVQYQSAVLNAITASCATLFGFASPLKPMAFPAGP*L*FHEICSGPRP* 153
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 152 YFCPAAHGHCLLLESQ*AL 96
Score = 96.4 bits (204), Expect(3) = 1e-065
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +2 / +1
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+GKN +N RV YYKQ+C+ GVDPG NLTC*
Sbjct: 313 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYKQYCRQLGVDPGPNLTC* 468
Score = 63.4 bits (132), Expect(3) = 2e-042
Identities = 31/47 (65%), Positives = 31/47 (65%)
Frame = -3 / -2
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP Q CL** TR FLP HS APLMA MVAP P
Sbjct: 464 QVRLGPGSTPSCRQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 324
Score = 44.1 bits (90), Expect(3) = 1e-065
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2 / +1
Query: 215 KREIAAFFGNANHETIKFCYINEID 289
KREIAAFF + HET FCYI+EI+
Sbjct: 16 KREIAAFFAHVTHETGHFCYISEIN 90
Score = 35.9 bits (72), Expect(3) = 2e-042
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = -3 / -2
Query: 285 ISLM*QNFMVSWLALPKKAAISRLESS 205
ISLM*Q VSW+ KKAAISRL ++
Sbjct: 86 ISLM*QKCPVSWVTWAKKAAISRLPAT 6
>gb|CD222353.1|CD222353 CCC1_21_F09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_21_F09_A007 3', mRNA sequence
Length = 647
Score = 149 bits (321), Expect(3) = 1e-065
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +1
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG++IGF+GL +P+ VA+ AV+AF++A
Sbjct: 121 YCDSSNKQWPCAAGQKYYGRGPLQISWNYNYGPAGKAIGFNGLANPNKVAQDAVIAFKTA 300
Query: 485 LWYWMNNVHGAIVSGQG 535
LWYW NNVHG + G G
Sbjct: 301 LWYWTNNVHGVMSQGFG 351
Score = 113 bits (241), Expect(3) = 2e-042
Identities = 52/79 (65%), Positives = 55/79 (69%)
Frame = -3 / -1
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLF+QYQSA NA TA AT G SP KPM PAGP*L F EICSGPRP*
Sbjct: 350 PNPCDITPCTLFVQYQSAVLNAITASCATLFGFASPLKPMAFPAGP*L*FHEICSGPRP* 171
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 170 YFCPAAHGHCLLLESQ*AL 114
Score = 96.4 bits (204), Expect(3) = 1e-065
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +2 / +1
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+GKN +N RV YYKQ+C+ GVDPG NLTC*
Sbjct: 331 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYKQYCRQLGVDPGPNLTC* 486
Score = 63.4 bits (132), Expect(3) = 2e-042
Identities = 31/47 (65%), Positives = 31/47 (65%)
Frame = -3 / -1
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP Q CL** TR FLP HS APLMA MVAP P
Sbjct: 482 QVRLGPGSTPSCRQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 342
Score = 44.1 bits (90), Expect(3) = 1e-065
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2 / +1
Query: 215 KREIAAFFGNANHETIKFCYINEID 289
KREIAAFF + HET FCYI+EI+
Sbjct: 34 KREIAAFFAHVTHETGHFCYISEIN 108
Score = 35.9 bits (72), Expect(3) = 2e-042
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = -3 / -1
Query: 285 ISLM*QNFMVSWLALPKKAAISRLESS 205
ISLM*Q VSW+ KKAAISRL ++
Sbjct: 104 ISLM*QKCPVSWVTWAKKAAISRLPAT 24
>gb|CD221995.1|CD221995 CCC1_1_C09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_1_C09_A007 3', mRNA sequence
Length = 637
Score = 149 bits (321), Expect(3) = 1e-065
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +3
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG++IGF+GL +P+ VA+ AV+AF++A
Sbjct: 111 YCDSSNKQWPCAAGQKYYGRGPLQISWNYNYGPAGKAIGFNGLANPNKVAQDAVIAFKTA 290
Query: 485 LWYWMNNVHGAIVSGQG 535
LWYW NNVHG + G G
Sbjct: 291 LWYWTNNVHGVMSQGFG 341
Score = 113 bits (241), Expect(3) = 2e-042
Identities = 52/79 (65%), Positives = 55/79 (69%)
Frame = -3 / -1
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLF+QYQSA NA TA AT G SP KPM PAGP*L F EICSGPRP*
Sbjct: 340 PNPCDITPCTLFVQYQSAVLNAITASCATLFGFASPLKPMAFPAGP*L*FHEICSGPRP* 161
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 160 YFCPAAHGHCLLLESQ*AL 104
Score = 96.4 bits (204), Expect(3) = 1e-065
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +2 / +3
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+GKN +N RV YYKQ+C+ GVDPG NLTC*
Sbjct: 321 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYKQYCRQLGVDPGPNLTC* 476
Score = 63.4 bits (132), Expect(3) = 2e-042
Identities = 31/47 (65%), Positives = 31/47 (65%)
Frame = -3 / -1
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP Q CL** TR FLP HS APLMA MVAP P
Sbjct: 472 QVRLGPGSTPSCRQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 332
Score = 44.1 bits (90), Expect(3) = 1e-065
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2 / +3
Query: 215 KREIAAFFGNANHETIKFCYINEID 289
KREIAAFF + HET FCYI+EI+
Sbjct: 24 KREIAAFFAHVTHETGHFCYISEIN 98
Score = 35.9 bits (72), Expect(3) = 2e-042
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = -3 / -1
Query: 285 ISLM*QNFMVSWLALPKKAAISRLESS 205
ISLM*Q VSW+ KKAAISRL ++
Sbjct: 94 ISLM*QKCPVSWVTWAKKAAISRLPAT 14
>gb|AW680953.1|AW680953 WS1_9_A06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 536
Score = 149 bits (321), Expect(3) = 1e-065
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +2
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG++IGF+GL +P+ VA+ AV+AF++A
Sbjct: 101 YCDSSNKQWPCAAGQKYYGRGPLQISWNYNYGPAGKAIGFNGLANPNKVAQDAVIAFKTA 280
Query: 485 LWYWMNNVHGAIVSGQG 535
LWYW NNVHG + G G
Sbjct: 281 LWYWTNNVHGVMSQGFG 331
Score = 113 bits (241), Expect(3) = 7e-043
Identities = 52/79 (65%), Positives = 55/79 (69%)
Frame = -3 / -3
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLF+QYQSA NA TA AT G SP KPM PAGP*L F EICSGPRP*
Sbjct: 330 PNPCDITPCTLFVQYQSAVLNAITASCATLFGFASPLKPMAFPAGP*L*FHEICSGPRP* 151
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 150 YFCPAAHGHCLLLESQ*AL 94
Score = 96.4 bits (204), Expect(3) = 1e-065
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +2 / +2
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+GKN +N RV YYKQ+C+ GVDPG NLTC*
Sbjct: 311 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYKQYCRQLGVDPGPNLTC* 466
Score = 63.4 bits (132), Expect(3) = 7e-043
Identities = 31/47 (65%), Positives = 31/47 (65%)
Frame = -3 / -3
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP Q CL** TR FLP HS APLMA MVAP P
Sbjct: 462 QVRLGPGSTPSCRQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 322
Score = 44.1 bits (90), Expect(3) = 1e-065
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2 / +2
Query: 215 KREIAAFFGNANHETIKFCYINEID 289
KREIAAFF + HET FCYI+EI+
Sbjct: 14 KREIAAFFAHVTHETGHFCYISEIN 88
Score = 37.3 bits (75), Expect(3) = 7e-043
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -3 / -3
Query: 285 ISLM*QNFMVSWLALPKKAAISRLESS 205
ISLM*Q VSW+ KKAAISRL +S
Sbjct: 84 ISLM*QKCPVSWVTWAKKAAISRLPAS 4
>gb|BE357811.1|BE357811 DG1_22_D10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 624
Score = 162 bits (349), Expect(2) = 4e-065
Identities = 57/84 (67%), Positives = 70/84 (83%)
Frame = +2 / +2
Query: 284 IDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSA 463
I+G S+NYCD NN QWPC GK YYGRGPLQISWN+NYGPAG++IGFDGLG+PD VA+
Sbjct: 2 INGASRNYCDANNRQWPCAPGKKYYGRGPLQISWNYNYGPAGKAIGFDGLGNPDKVAQDP 181
Query: 464 VLAFRSALWYWMNNVHGAIVSGQG 535
V++F++ALW+WMNNVH + G G
Sbjct: 182 VISFKTALWFWMNNVHQVMPQGFG 253
Score = 124 bits (266), Expect(2) = 1e-042
Identities = 58/84 (69%), Positives = 59/84 (70%)
Frame = -3 / -1
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P M CTLFIQ QSA N T AT SG PSPSKPM PAGP*L F EICSGPRP*
Sbjct: 252 PNPCGMTWCTLFIQNQSAVLNEITGSCATLSGFPSPSKPMAFPAGP*L*FHEICSGPRP* 73
Query: 354 YPFPAWHGHCVLFRSQ*FLLGPSI 283
Y FP HGHC+LF SQ*FLL P I
Sbjct: 72 YFFPGAHGHCLLFASQ*FLLAPLI 1
Score = 107 bits (228), Expect(2) = 4e-065
Identities = 42/60 (70%), Positives = 47/60 (78%)
Frame = +2 / +2
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC*MFSLSLGC 700
V QGFGATIRAINGALEC+GKNP +VN RV YYK +C+ FGVDPGNNLTC* + C
Sbjct: 233 VMPQGFGATIRAINGALECNGKNPGAVNARVGYYKDYCKQFGVDPGNNLTC*RCRVHRSC 412
Score = 70.3 bits (147), Expect(2) = 1e-042
Identities = 33/47 (70%), Positives = 33/47 (70%)
Frame = -3 / -1
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP Q L** TR T GFLP HS APLMARMVAP P
Sbjct: 384 QVRLFPGSTPNCLQ*SL**PTRAFTAPGFLPLHSRAPLMARMVAPNP 244
>gb|CD225895.1|CD225895 CCC1_42_B03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_42_B03_A007 3', mRNA sequence
Length = 653
Score = 147 bits (316), Expect(3) = 7e-065
Identities = 51/77 (66%), Positives = 65/77 (84%)
Frame = +2 / +1
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG++IGF+GL +P+ VA+ AV+AF++A
Sbjct: 118 YCDSSNKQWPCAAGQKYYGRGPLQISWNYNYGPAGKAIGFNGLANPNKVAQDAVIAFKTA 297
Query: 485 LWYWMNNVHGAIVSGQG 535
LWYW +NVHG + G G
Sbjct: 298 LWYWTDNVHGVMSQGFG 348
Score = 109 bits (233), Expect(3) = 2e-041
Identities = 51/79 (64%), Positives = 54/79 (68%)
Frame = -3 / -1
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTL +QYQSA NA TA AT G SP KPM PAGP*L F EICSGPRP*
Sbjct: 347 PNPCDITPCTLSVQYQSAVLNAITASCATLFGFASPLKPMAFPAGP*L*FHEICSGPRP* 168
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 167 YFCPAAHGHCLLLESQ*AL 111
Score = 96.4 bits (204), Expect(3) = 7e-065
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +2 / +1
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+GKN +N RV YYKQ+C+ GVDPG NLTC*
Sbjct: 328 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYKQYCRQLGVDPGPNLTC* 483
Score = 63.4 bits (132), Expect(3) = 2e-041
Identities = 31/47 (65%), Positives = 31/47 (65%)
Frame = -3 / -1
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP Q CL** TR FLP HS APLMA MVAP P
Sbjct: 479 QVRLGPGSTPSCRQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 339
Score = 44.1 bits (90), Expect(3) = 7e-065
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2 / +1
Query: 215 KREIAAFFGNANHETIKFCYINEID 289
KREIAAFF + HET FCYI+EI+
Sbjct: 31 KREIAAFFAHVTHETGHFCYISEIN 105
Score = 35.9 bits (72), Expect(3) = 2e-041
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = -3 / -1
Query: 285 ISLM*QNFMVSWLALPKKAAISRLESS 205
ISLM*Q VSW+ KKAAISRL ++
Sbjct: 101 ISLM*QKCPVSWVTWAKKAAISRLPAT 21
>gb|BE363379.1|BE363379 WS1_62_C05.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 534
Score = 150 bits (323), Expect(3) = 1e-064
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +2 / +3
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG+ IGFDGL +PD VA+ AV+AF++A
Sbjct: 141 YCDSSNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFDGLRNPDRVAQDAVVAFKTA 320
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+W NNVHG + G G
Sbjct: 321 LWFWTNNVHGVMSQGFG 371
Score = 111 bits (238), Expect(3) = 7e-042
Identities = 52/79 (65%), Positives = 56/79 (70%)
Frame = -3 / -3
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTL +Q QSA NA+TA AT SG SPSKPM PAGP*L F EICSGPRP*
Sbjct: 370 PNPCDITPCTLLVQNQSAVLNATTASCATLSGFRSPSKPMSLPAGP*L*FHEICSGPRP* 191
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 190 YF*PAAHGHCLLLESQ*AL 134
Score = 92.3 bits (195), Expect(3) = 1e-064
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2 / +3
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLT 670
V QGFGATIRAINGALEC+GKN +N RV YY+Q+CQ GVDPG NLT
Sbjct: 351 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYRQYCQQLGVDPGPNLT 500
Score = 69.8 bits (146), Expect(3) = 7e-042
Identities = 32/47 (68%), Positives = 32/47 (68%)
Frame = -3 / -3
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP WQ CL** TR FLP HS APLMA MVAP P
Sbjct: 502 QVRLGPGSTPSCWQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 362
Score = 44.1 bits (90), Expect(3) = 1e-064
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2 / +3
Query: 188 GRTGTVDDSKREIAAFFGNANHETIKFCYINEID 289
G G KREIAAFF + HET FCYI+EI+
Sbjct: 27 GFGGRSVQGKREIAAFFAHITHETGHFCYISEIN 128
Score = 29.0 bits (57), Expect(3) = 7e-042
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -3 / -3
Query: 285 ISLM*QNFMVSWLALPKKAAISRL 214
ISLM*Q VS + KKAAISRL
Sbjct: 124 ISLM*QKCPVSCVMWAKKAAISRL 53
>gb|BG101749.1|BG101749 EM1_5_G10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 519
Score = 149 bits (321), Expect(4) = 3e-064
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +3
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG++IGF+GL +P+ VA+ AV+AF++A
Sbjct: 195 YCDSSNKQWPCAAGQKYYGRGPLQISWNYNYGPAGKAIGFNGLANPNKVAQDAVIAFKTA 374
Query: 485 LWYWMNNVHGAIVSGQG 535
LWYW NNVHG + G G
Sbjct: 375 LWYWTNNVHGVMSQGFG 425
Score = 113 bits (241), Expect(3) = 4e-037
Identities = 52/79 (65%), Positives = 55/79 (69%)
Frame = -3 / -3
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLF+QYQSA NA TA AT G SP KPM PAGP*L F EICSGPRP*
Sbjct: 424 PNPCDITPCTLFVQYQSAVLNAITASCATLFGFASPLKPMAFPAGP*L*FHEICSGPRP* 245
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 244 YFCPAAHGHCLLLESQ*AL 188
Score = 72.1 bits (151), Expect(4) = 3e-064
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = +2 / +3
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFC 634
V QGFGATIRAINGALEC+GKN +N RV YYKQ+C
Sbjct: 405 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYKQYC 518
Score = 45.5 bits (93), Expect(3) = 4e-037
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -3 / -3
Query: 633 QNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
Q CL** TR FLP HS APLMA MVAP P
Sbjct: 517 QYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 416
Score = 44.1 bits (90), Expect(4) = 3e-064
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2 / +3
Query: 215 KREIAAFFGNANHETIKFCYINEID 289
KREIAAFF + HET FCYI+EI+
Sbjct: 108 KREIAAFFAHVTHETGHFCYISEIN 182
Score = 38.2 bits (77), Expect(4) = 3e-064
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 122 CEANGFYTRDAFLAAAGYYPAFG 190
CE FYTR AFL+AA Y +FG
Sbjct: 21 CEGKNFYTRSAFLSAANSYKSFG 89
Score = 35.9 bits (72), Expect(3) = 4e-037
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = -3 / -3
Query: 285 ISLM*QNFMVSWLALPKKAAISRLESS 205
ISLM*Q VSW+ KKAAISRL ++
Sbjct: 178 ISLM*QKCPVSWVTWAKKAAISRLPAT 98
>gb|CD423411.1|CD423411 SA1_23_C09.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_23_C09_A002 3', mRNA sequence
Length = 651
Score = 155 bits (332), Expect(3) = 3e-064
Identities = 56/74 (75%), Positives = 65/74 (87%)
Frame = +2 / +1
Query: 314 RNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWY 493
R TQWPC AG+ YYGRGPLQISWN+NYGPAGQSIGFDGLG+PDAVA+ AV+AF++ALW+
Sbjct: 73 RTATQWPCAAGQKYYGRGPLQISWNYNYGPAGQSIGFDGLGNPDAVAQDAVIAFKAALWF 252
Query: 494 WMNNVHGAIVSGQG 535
WMNNVHG + G G
Sbjct: 253 WMNNVHGVMPQGFG 294
Score = 118 bits (252), Expect(2) = 1e-026
Identities = 53/74 (71%), Positives = 54/74 (72%)
Frame = -3 / -2
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLFIQ QSA NA TA ATASG PSPSKPMLCPAGP*L F EIC GP P*
Sbjct: 293 PNPCGITPCTLFIQNQSAALNAITASCATASGFPSPSKPMLCPAGP*L*FHEICRGPLP* 114
Query: 354 YPFPAWHGHCVLFR 313
Y PA HGHCV R
Sbjct: 113 YFCPAAHGHCVAVR 72
Score = 102 bits (218), Expect(3) = 3e-064
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +2 / +1
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+G NP +N RV YYKQ+CQ FGVDPG+NLTC*
Sbjct: 274 VMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQFGVDPGSNLTC* 429
Score = 28.1 bits (55), Expect(3) = 3e-064
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / +3
Query: 242 NANHETIKFCYINEID 289
+A HET FCYI+EI+
Sbjct: 3 HATHETGHFCYISEIN 50
Score = 23.1 bits (44), Expect(2) = 1e-026
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -1
Query: 673 AGEVVARVDAEI 638
AGEV RVDAE+
Sbjct: 426 AGEVAPRVDAEL 391
>gb|CW150339.1|CW150339 104_549_11142974_116_36302_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11142974, DNA
sequence
Length = 649
Score = 162 bits (349), Expect(2) = 1e-063
Identities = 58/77 (75%), Positives = 68/77 (88%)
Frame = +2 / -3
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD + TQWPC AG+ YYGRGPLQISWN+NYGPAGQSIGFDGLG+PDAVA+ AV+AF++A
Sbjct: 548 YCDSSYTQWPCAAGQKYYGRGPLQISWNYNYGPAGQSIGFDGLGNPDAVAQDAVIAFKAA 369
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+WMNNVHG + G G
Sbjct: 368 LWFWMNNVHGVMPQGFG 318
Score = 120 bits (257), Expect(2) = 2e-027
Identities = 56/79 (70%), Positives = 57/79 (72%)
Frame = -3 / +1
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLFIQ QSA NA TA ATASG PSPSKPMLCPAGP*L F EIC GP P*
Sbjct: 319 PNPCGITPCTLFIQNQSAALNAITASCATASGFPSPSKPMLCPAGP*L*FHEICRGPLP* 498
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHCV SQ* L
Sbjct: 499 YFCPAAHGHCV*LESQ*AL 555
Score = 102 bits (218), Expect(2) = 1e-063
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +2 / -3
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+G NP +N RV YYKQ+CQ FGVDPG+NLTC*
Sbjct: 338 VMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQFGVDPGSNLTC* 183
Score = 23.1 bits (44), Expect(2) = 2e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +3
Query: 673 AGEVVARVDAEI 638
AGEV RVDAE+
Sbjct: 186 AGEVAPRVDAEL 221
>gb|AW924229.1|AW924229 WS1_51_H04.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 447
Score = 162 bits (349), Expect(2) = 1e-063
Identities = 58/77 (75%), Positives = 68/77 (88%)
Frame = +2 / +3
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD + TQWPC AG+ YYGRGPLQISWN+NYGPAGQSIGFDGLG+PDAVA+ AV+AF++A
Sbjct: 36 YCDSSYTQWPCAAGQKYYGRGPLQISWNYNYGPAGQSIGFDGLGNPDAVAQDAVIAFKAA 215
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+WMNNVHG + G G
Sbjct: 216 LWFWMNNVHGVMPQGFG 266
Score = 120 bits (257), Expect(2) = 2e-027
Identities = 56/79 (70%), Positives = 57/79 (72%)
Frame = -3 / -3
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLFIQ QSA NA TA ATASG PSPSKPMLCPAGP*L F EIC GP P*
Sbjct: 265 PNPCGITPCTLFIQNQSAALNAITASCATASGFPSPSKPMLCPAGP*L*FHEICRGPLP* 86
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHCV SQ* L
Sbjct: 85 YFCPAAHGHCV*LESQ*AL 29
Score = 102 bits (218), Expect(2) = 1e-063
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +2 / +3
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+G NP +N RV YYKQ+CQ FGVDPG+NLTC*
Sbjct: 246 VMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQFGVDPGSNLTC* 401
Score = 23.1 bits (44), Expect(2) = 2e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -2
Query: 673 AGEVVARVDAEI 638
AGEV RVDAE+
Sbjct: 398 AGEVAPRVDAEL 363
>gb|CW318996.1|CW318996 104_811_11474252_116_35881_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474252, DNA
sequence
Length = 584
Score = 159 bits (342), Expect(2) = 9e-063
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +2 / -3
Query: 308 CDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSAL 487
CD + TQWPC AG+ YYGRGPLQISWN+NYGPAGQSIGFDGLG+PDAVA+ AV+AF++AL
Sbjct: 582 CDSSYTQWPCAAGQKYYGRGPLQISWNYNYGPAGQSIGFDGLGNPDAVAQDAVIAFKAAL 403
Query: 488 WYWMNNVHGAIVSGQG 535
W+WMNNVHG + G G
Sbjct: 402 WFWMNNVHGVMPQGFG 355
Score = 119 bits (254), Expect(2) = 6e-027
Identities = 54/76 (71%), Positives = 55/76 (72%)
Frame = -3 / +2
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLFIQ QSA NA TA ATASG PSPSKPMLCPAGP*L F EIC GP P*
Sbjct: 356 PNPCGITPCTLFIQNQSAALNAITASCATASGFPSPSKPMLCPAGP*L*FHEICRGPLP* 535
Query: 354 YPFPAWHGHCVLFRSQ 307
Y PA HGHCV SQ
Sbjct: 536 YFCPAAHGHCV*LESQ 583
Score = 102 bits (218), Expect(2) = 9e-063
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +2 / -3
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+G NP +N RV YYKQ+CQ FGVDPG+NLTC*
Sbjct: 375 VMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQFGVDPGSNLTC* 220
Score = 23.1 bits (44), Expect(2) = 6e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 673 AGEVVARVDAEI 638
AGEV RVDAE+
Sbjct: 223 AGEVAPRVDAEL 258
>gb|BE359997.1|BE359997 DG1_60_H07.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 486
Score = 159 bits (342), Expect(2) = 9e-063
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +2 / +3
Query: 308 CDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSAL 487
CD + TQWPC AG+ YYGRGPLQISWN+NYGPAGQSIGFDGLG+PDAVA+ AV+AF++AL
Sbjct: 3 CDSSYTQWPCAAGQKYYGRGPLQISWNYNYGPAGQSIGFDGLGNPDAVAQDAVIAFKAAL 182
Query: 488 WYWMNNVHGAIVSGQG 535
W+WMNNVHG + G G
Sbjct: 183 WFWMNNVHGVMPQGFG 230
Score = 119 bits (254), Expect(2) = 6e-027
Identities = 54/76 (71%), Positives = 55/76 (72%)
Frame = -3 / -3
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLFIQ QSA NA TA ATASG PSPSKPMLCPAGP*L F EIC GP P*
Sbjct: 229 PNPCGITPCTLFIQNQSAALNAITASCATASGFPSPSKPMLCPAGP*L*FHEICRGPLP* 50
Query: 354 YPFPAWHGHCVLFRSQ 307
Y PA HGHCV SQ
Sbjct: 49 YFCPAAHGHCV*LESQ 2
Score = 102 bits (218), Expect(2) = 9e-063
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +2 / +3
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+G NP +N RV YYKQ+CQ FGVDPG+NLTC*
Sbjct: 210 VMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQFGVDPGSNLTC* 365
Score = 23.1 bits (44), Expect(2) = 6e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -2
Query: 673 AGEVVARVDAEI 638
AGEV RVDAE+
Sbjct: 362 AGEVAPRVDAEL 327
>gb|CW357974.1|CW357974 fsbb001f024n22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f024n22, DNA
sequence
Length = 686
Score = 153 bits (329), Expect(2) = 5e-061
Identities = 55/71 (77%), Positives = 64/71 (90%)
Frame = +2 / -1
Query: 323 TQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWMN 502
TQWPC AG+ YYGRGPLQISWN+NYGPAGQSIGFDGLG+PDAVA+ AV+AF++ALW+WMN
Sbjct: 680 TQWPCAAGQKYYGRGPLQISWNYNYGPAGQSIGFDGLGNPDAVAQDAVIAFKAALWFWMN 501
Query: 503 NVHGAIVSGQG 535
NVHG + G G
Sbjct: 500 NVHGVMPQGFG 468
Score = 116 bits (249), Expect(2) = 3e-026
Identities = 52/71 (73%), Positives = 53/71 (74%)
Frame = -3 / +1
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLFIQ QSA NA TA ATASG PSPSKPMLCPAGP*L F EIC GP P*
Sbjct: 469 PNPCGITPCTLFIQNQSAALNAITASCATASGFPSPSKPMLCPAGP*L*FHEICRGPLP* 648
Query: 354 YPFPAWHGHCV 322
Y PA HGHCV
Sbjct: 649 YFCPAAHGHCV 681
Score = 102 bits (218), Expect(2) = 5e-061
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +2 / -1
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+G NP +N RV YYKQ+CQ FGVDPG+NLTC*
Sbjct: 488 VMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQFGVDPGSNLTC* 333
Score = 23.1 bits (44), Expect(2) = 3e-026
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +3
Query: 673 AGEVVARVDAEI 638
AGEV RVDAE+
Sbjct: 336 AGEVAPRVDAEL 371
>gb|AW746018.1|AW746018 WS1_38_H11.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 615
Score = 150 bits (323), Expect(3) = 6e-061
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +2 / +2
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG+ IGFDGL +PD VA+ AV+AF++A
Sbjct: 65 YCDSSNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFDGLRNPDRVAQDAVVAFKTA 244
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+W NNVHG + G G
Sbjct: 245 LWFWTNNVHGVMSQGFG 295
Score = 111 bits (238), Expect(2) = 1e-038
Identities = 52/79 (65%), Positives = 56/79 (70%)
Frame = -3 / -1
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTL +Q QSA NA+TA AT SG SPSKPM PAGP*L F EICSGPRP*
Sbjct: 294 PNPCDITPCTLLVQNQSAVLNATTASCATLSGFRSPSKPMSLPAGP*L*FHEICSGPRP* 115
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 114 YF*PAAHGHCLLLESQ*AL 58
Score = 98.2 bits (208), Expect(3) = 6e-061
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = +2 / +2
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC*MFSLSLGC 700
V QGFGATIRAINGALEC+GKN +N RV YY+Q+CQ GVDPG NLTC*+ +
Sbjct: 275 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYRQYCQQLGVDPGPNLTC*VARRAASA 454
Query: 701 CPV 709
P+
Sbjct: 455 SPL 463
Score = 69.8 bits (146), Expect(2) = 1e-038
Identities = 32/47 (68%), Positives = 32/47 (68%)
Frame = -3 / -1
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP WQ CL** TR FLP HS APLMA MVAP P
Sbjct: 426 QVRLGPGSTPSCWQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 286
Score = 25.8 bits (50), Expect(3) = 6e-061
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 251 HETIKFCYINEID 289
HET FCYI+EI+
Sbjct: 14 HETGHFCYISEIN 52
>gb|CD224094.1|CD224094 CCC1_32_C12.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_32_C12_A007 3', mRNA sequence
Length = 611
Score = 150 bits (323), Expect(3) = 6e-061
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +2 / +2
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG+ IGFDGL +PD VA+ AV+AF++A
Sbjct: 65 YCDSSNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFDGLRNPDRVAQDAVVAFKTA 244
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+W NNVHG + G G
Sbjct: 245 LWFWTNNVHGVMSQGFG 295
Score = 111 bits (238), Expect(2) = 1e-038
Identities = 52/79 (65%), Positives = 56/79 (70%)
Frame = -3 / -3
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTL +Q QSA NA+TA AT SG SPSKPM PAGP*L F EICSGPRP*
Sbjct: 294 PNPCDITPCTLLVQNQSAVLNATTASCATLSGFRSPSKPMSLPAGP*L*FHEICSGPRP* 115
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 114 YF*PAAHGHCLLLESQ*AL 58
Score = 98.2 bits (208), Expect(3) = 6e-061
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = +2 / +2
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC*MFSLSLGC 700
V QGFGATIRAINGALEC+GKN +N RV YY+Q+CQ GVDPG NLTC*+ +
Sbjct: 275 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYRQYCQQLGVDPGPNLTC*VARRAASA 454
Query: 701 CPV 709
P+
Sbjct: 455 SPL 463
Score = 69.8 bits (146), Expect(2) = 1e-038
Identities = 32/47 (68%), Positives = 32/47 (68%)
Frame = -3 / -3
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP WQ CL** TR FLP HS APLMA MVAP P
Sbjct: 426 QVRLGPGSTPSCWQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 286
Score = 25.8 bits (50), Expect(3) = 6e-061
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 251 HETIKFCYINEID 289
HET FCYI+EI+
Sbjct: 14 HETGHFCYISEIN 52
>gb|CD226332.1|CD226332 CCC1_45_F08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_45_F08_A007 3', mRNA sequence
Length = 611
Score = 150 bits (323), Expect(3) = 6e-061
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +2 / +2
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG+ IGFDGL +PD VA+ AV+AF++A
Sbjct: 65 YCDSSNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFDGLRNPDRVAQDAVVAFKTA 244
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+W NNVHG + G G
Sbjct: 245 LWFWTNNVHGVMSQGFG 295
Score = 111 bits (238), Expect(2) = 1e-038
Identities = 52/79 (65%), Positives = 56/79 (70%)
Frame = -3 / -3
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTL +Q QSA NA+TA AT SG SPSKPM PAGP*L F EICSGPRP*
Sbjct: 294 PNPCDITPCTLLVQNQSAVLNATTASCATLSGFRSPSKPMSLPAGP*L*FHEICSGPRP* 115
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 114 YF*PAAHGHCLLLESQ*AL 58
Score = 98.2 bits (208), Expect(3) = 6e-061
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = +2 / +2
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC*MFSLSLGC 700
V QGFGATIRAINGALEC+GKN +N RV YY+Q+CQ GVDPG NLTC*+ +
Sbjct: 275 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYRQYCQQLGVDPGPNLTC*VARRAASA 454
Query: 701 CPV 709
P+
Sbjct: 455 SPL 463
Score = 69.8 bits (146), Expect(2) = 1e-038
Identities = 32/47 (68%), Positives = 32/47 (68%)
Frame = -3 / -3
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP WQ CL** TR FLP HS APLMA MVAP P
Sbjct: 426 QVRLGPGSTPSCWQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 286
Score = 25.8 bits (50), Expect(3) = 6e-061
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 251 HETIKFCYINEID 289
HET FCYI+EI+
Sbjct: 14 HETGHFCYISEIN 52
>gb|BG102665.1|BG102665 RHIZ2_35_G08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 382
Score = 193 bits (416), Expect(2) = 2e-060
Identities = 69/102 (67%), Positives = 83/102 (81%)
Frame = +2 / +1
Query: 230 AFFGNANHETIKFCYINEIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAG 409
AFF + HET FCYINEI+G S+NYCD NN QWPC GK YYGRGPLQISWN+NYGPAG
Sbjct: 1 AFFAHVTHETGHFCYINEINGASRNYCDANNRQWPCAPGKKYYGRGPLQISWNYNYGPAG 180
Query: 410 QSIGFDGLGDPDAVARSAVLAFRSALWYWMNNVHGAIVSGQG 535
++IGFDGLG+PD VA+ V++F++ALW+WMNNVH + G G
Sbjct: 181 KAIGFDGLGNPDKVAQDPVISFKTALWFWMNNVHQVMPQGFG 306
Score = 136 bits (291), Expect(2) = 5e-040
Identities = 66/101 (65%), Positives = 68/101 (67%)
Frame = -3 / -3
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P M CTLFIQ QSA N T AT SG PSPSKPM PAGP*L F EICSGPRP*
Sbjct: 305 PKPCGMTWCTLFIQNQSAVLNEITGSCATLSGFPSPSKPMAFPAGP*L*FHEICSGPRP* 126
Query: 354 YPFPAWHGHCVLFRSQ*FLLGPSISLM*QNFMVSWLALPKK 232
Y FP HGHC+L SQ*FLL P ISLM*Q VS + KK
Sbjct: 125 YFFPGAHGHCLLLASQ*FLLAPLISLM*QKCPVSCVTCAKK 3
Score = 61.1 bits (127), Expect(2) = 2e-060
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +2 / +1
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRV 613
V QGFGATIRAINGALEC+GKNP +VN RV
Sbjct: 286 VMPQGFGATIRAINGALECNGKNPGAVNARV 378
Score = 50.1 bits (103), Expect(2) = 5e-040
Identities = 21/27 (77%), Positives = 21/27 (77%)
Frame = -3 / -3
Query: 612 TRLLTELGFLPSHSSAPLMARMVAPKP 532
TR T GFLP HS APLMARMVAPKP
Sbjct: 377 TRAFTAPGFLPLHSRAPLMARMVAPKP 297
>gb|CD464022.1|CD464022 ETH1_48_G10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_48_G10_A002 3', mRNA sequence
Length = 690
Score = 149 bits (321), Expect(3) = 3e-060
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +1
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG++IGF+GL +P+ VA+ AV+AF++A
Sbjct: 64 YCDSSNKQWPCAAGQKYYGRGPLQISWNYNYGPAGKAIGFNGLANPNKVAQDAVIAFKTA 243
Query: 485 LWYWMNNVHGAIVSGQG 535
LWYW NNVHG + G G
Sbjct: 244 LWYWTNNVHGVMSQGFG 294
Score = 113 bits (241), Expect(2) = 3e-037
Identities = 52/79 (65%), Positives = 55/79 (69%)
Frame = -3 / -2
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLF+QYQSA NA TA AT G SP KPM PAGP*L F EICSGPRP*
Sbjct: 293 PNPCDITPCTLFVQYQSAVLNAITASCATLFGFASPLKPMAFPAGP*L*FHEICSGPRP* 114
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 113 YFCPAAHGHCLLLESQ*AL 57
Score = 96.4 bits (204), Expect(3) = 3e-060
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +2 / +1
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+GKN +N RV YYKQ+C+ GVDPG NLTC*
Sbjct: 274 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYKQYCRQLGVDPGPNLTC* 429
Score = 63.4 bits (132), Expect(2) = 3e-037
Identities = 31/47 (65%), Positives = 31/47 (65%)
Frame = -3 / -2
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP Q CL** TR FLP HS APLMA MVAP P
Sbjct: 425 QVRLGPGSTPSCRQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 285
Score = 26.3 bits (51), Expect(3) = 3e-060
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2 / +1
Query: 242 NANHETIKFCYINEID 289
+ HET FCYI+EI+
Sbjct: 4 HVTHETGHFCYISEIN 51
>gb|CW448428.1|CW448428 fsbb001f182a11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f182a11, DNA
sequence
Length = 633
Score = 153 bits (328), Expect(2) = 4e-060
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +2 / -3
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YC+ +N QWPC GK YYGRGPLQISWN+NYGPAG+ IGFDGLG+PD VA+ V+AF++A
Sbjct: 604 YCNSSNAQWPCAPGKKYYGRGPLQISWNYNYGPAGREIGFDGLGNPDMVAQDPVIAFKTA 425
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+WMNNVHG + G G
Sbjct: 424 LWFWMNNVHGVMPQGFG 374
Score = 113 bits (241), Expect(2) = 2e-038
Identities = 52/79 (65%), Positives = 54/79 (68%)
Frame = -3 / +3
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLFIQ QSA NA T AT SG PSPSKP+ PAGP*L F EICSGPRP*
Sbjct: 375 PNPCGITPCTLFIQNQSAVLNAITGSCATMSGFPSPSKPISLPAGP*L*FHEICSGPRP* 554
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y FP HGHC L Q* L
Sbjct: 555 YFFPGAHGHCALLELQ*AL 611
Score = 100 bits (213), Expect(2) = 4e-060
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = +2 / -3
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAI+GALEC+G NP +N RV YYKQ+CQ FGVDPGN+LTC*
Sbjct: 394 VMPQGFGATIRAIDGALECNGNNPAQMNARVGYYKQYCQQFGVDPGNSLTC* 239
Score = 68.0 bits (142), Expect(2) = 2e-038
Identities = 30/47 (63%), Positives = 30/47 (63%)
Frame = -3 / +3
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP WQ CL** TR G P HS AP MA MVAP P
Sbjct: 243 QVRLFPGSTPNCWQYCL**PTRAFICAGLFPLHSRAPSMALMVAPNP 383
>gb|CW400945.1|CW400945 fsbb001f091i05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f091i05, DNA
sequence
Length = 439
Score = 129 bits (277), Expect(2) = 2e-059
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = +2 / +3
Query: 260 IKFCYINEIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPA 406
++FCYINEIDGPSKNYCD NNT+WPCQAGKGYYGRGPLQISWN+NYGPA
Sbjct: 291 VEFCYINEIDGPSKNYCDANNTEWPCQAGKGYYGRGPLQISWNYNYGPA 437
Score = 121 bits (259), Expect(2) = 2e-059
Identities = 49/62 (79%), Positives = 50/62 (80%)
Frame = +2 / +2
Query: 77 TPXXXXXXXXXXXXSCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHE 256
TP SCEANGFYTRDAFLAAAGYYP+FGRTGTVDDSKREIAAFFGNANHE
Sbjct: 2 TPAFFDALLAQAAASCEANGFYTRDAFLAAAGYYPSFGRTGTVDDSKREIAAFFGNANHE 181
Query: 257 TI 262
TI
Sbjct: 182 TI 187
Score = 105 bits (225), Expect(2) = 4e-030
Identities = 44/48 (91%), Positives = 44/48 (91%)
Frame = -3 / -1
Query: 408 PAGP*LKFQEICSGPRP*YPFPAWHGHCVLFRSQ*FLLGPSISLM*QN 265
PAGP*L F EICSGPRP*YPFPAWHGH VLF SQ*FLLGPSISLM*QN
Sbjct: 439 PAGP*L*FHEICSGPRP*YPFPAWHGHSVLFASQ*FLLGPSISLM*QN 296
Score = 46.9 bits (96), Expect(2) = 4e-030
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3 / -2
Query: 261 MVSWLALPKKAAISRLESST 202
MVSWLALPKKAAISRLESST
Sbjct: 186 MVSWLALPKKAAISRLESST 127
>gb|CD220272.1|CD220272 CCC1_66_G11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_66_G11_A007 3', mRNA sequence
Length = 614
Score = 146 bits (314), Expect(3) = 3e-059
Identities = 51/77 (66%), Positives = 64/77 (83%)
Frame = +2 / +3
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGP QISWN+NYGPAG++IGF+GL +P+ VA+ AV+AF++A
Sbjct: 66 YCDSSNKQWPCAAGQKYYGRGPPQISWNYNYGPAGKAIGFNGLANPNKVAQDAVIAFKTA 245
Query: 485 LWYWMNNVHGAIVSGQG 535
LWYW NNVHG + G G
Sbjct: 246 LWYWTNNVHGVMSQGFG 296
Score = 107 bits (229), Expect(2) = 2e-035
Identities = 50/79 (63%), Positives = 53/79 (67%)
Frame = -3 / -2
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLF+QYQSA NA TA AT G SP KPM PAGP*L F EIC GPRP*
Sbjct: 295 PNPCDITPCTLFVQYQSAVLNAITASCATLFGFASPLKPMAFPAGP*L*FHEICGGPRP* 116
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA GHC+L SQ* L
Sbjct: 115 YFCPAAQGHCLLLESQ*AL 59
Score = 96.4 bits (204), Expect(3) = 3e-059
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +2 / +3
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC* 676
V QGFGATIRAINGALEC+GKN +N RV YYKQ+C+ GVDPG NLTC*
Sbjct: 276 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYKQYCRQLGVDPGPNLTC* 431
Score = 63.4 bits (132), Expect(2) = 2e-035
Identities = 31/47 (65%), Positives = 31/47 (65%)
Frame = -3 / -2
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP Q CL** TR FLP HS APLMA MVAP P
Sbjct: 427 QVRLGPGSTPSCRQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 287
Score = 26.3 bits (51), Expect(3) = 3e-059
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2 / +3
Query: 242 NANHETIKFCYINEID 289
+ HET FCYI+EI+
Sbjct: 6 HVTHETGHFCYISEIN 53
>gb|CX613534.1|CX613534 GABR1_8_E12.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_E12_A002 5', mRNA sequence
Length = 773
Score = 162 bits (349), Expect(4) = 3e-059
Identities = 58/77 (75%), Positives = 68/77 (88%)
Frame = +2 / +1
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD + TQWPC AG+ YYGRGPLQISWN+NYGPAGQSIGFDGLG+PDAVA+ AV+AF++A
Sbjct: 532 YCDSSYTQWPCAAGQKYYGRGPLQISWNYNYGPAGQSIGFDGLGNPDAVAQDAVIAFKAA 711
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+WMNNVHG + G G
Sbjct: 712 LWFWMNNVHGVMPQGFG 762
Score = 120 bits (257), Expect(3) = 6e-031
Identities = 56/79 (70%), Positives = 57/79 (72%)
Frame = -3 / -1
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTLFIQ QSA NA TA ATASG PSPSKPMLCPAGP*L F EIC GP P*
Sbjct: 761 PNPCGITPCTLFIQNQSAALNAITASCATASGFPSPSKPMLCPAGP*L*FHEICRGPLP* 582
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHCV SQ* L
Sbjct: 581 YFCPAAHGHCV*LESQ*AL 525
Score = 62.0 bits (129), Expect(4) = 3e-059
Identities = 25/43 (58%), Positives = 31/43 (72%)
Frame = +2 / +1
Query: 161 AAAGYYPAFGRTGTVDDSKREIAAFFGNANHETIKFCYINEID 289
A+A Y F + G+ DD KREIAAFF +A HET FCYI+EI+
Sbjct: 391 ASASAYSGFAQGGSEDDGKREIAAFFAHATHETGHFCYISEIN 519
Score = 37.7 bits (76), Expect(4) = 3e-059
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2 / +1
Query: 50 NNASVASIVTPXXXXXXXXXXXXSCEANGFYTRDAFLAAA 169
+ A+V ++VT CE + FY+RDAFL+AA
Sbjct: 274 SGANVGNVVTDAFFNGIKNQAGSGCEGSNFYSRDAFLSAA 393
Score = 34.1 bits (68), Expect(3) = 6e-031
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -3 / -1
Query: 285 ISLM*QNFMVSWLALPKKAAISRLESST 202
ISLM*Q VS +A KKAAISRL SS+
Sbjct: 515 ISLM*QKCPVSCVA*AKKAAISRLPSSS 432
Score = 24.9 bits (48), Expect(4) = 3e-059
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2 / +1
Query: 8 GAGCQSGPC 34
G GC+SGPC
Sbjct: 211 GTGCRSGPC 237
Score = 22.6 bits (43), Expect(3) = 6e-031
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3 / -1
Query: 33 QGPDWHPAP 7
QGPD HP P
Sbjct: 236 QGPDRHPVP 210
>gb|CW365833.1|CW365833 fsbb001f038i18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038i18, DNA
sequence
Length = 831
Score = 150 bits (323), Expect(2) = 8e-059
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +2 / +3
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG+ IGFDGL +PD VA+ AV+AF++A
Sbjct: 135 YCDSSNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFDGLRNPDRVAQDAVVAFKTA 314
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+W NNVHG + G G
Sbjct: 315 LWFWTNNVHGVMSQGFG 365
Score = 111 bits (238), Expect(2) = 1e-038
Identities = 52/79 (65%), Positives = 56/79 (70%)
Frame = -3 / -3
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTL +Q QSA NA+TA AT SG SPSKPM PAGP*L F EICSGPRP*
Sbjct: 364 PNPCDITPCTLLVQNQSAVLNATTASCATLSGFRSPSKPMSLPAGP*L*FHEICSGPRP* 185
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 184 YF*PAAHGHCLLLESQ*AL 128
Score = 98.2 bits (208), Expect(2) = 8e-059
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = +2 / +3
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC*MFSLSLGC 700
V QGFGATIRAINGALEC+GKN +N RV YY+Q+CQ GVDPG NLTC*+ +
Sbjct: 345 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYRQYCQQLGVDPGPNLTC*VARRAASA 524
Query: 701 CPV 709
P+
Sbjct: 525 SPL 533
Score = 69.8 bits (146), Expect(2) = 1e-038
Identities = 32/47 (68%), Positives = 32/47 (68%)
Frame = -3 / -3
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP WQ CL** TR FLP HS APLMA MVAP P
Sbjct: 496 QVRLGPGSTPSCWQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 356
>gb|CL160722.1|CL160722 104_351_10805186_116_31825_242 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805186, DNA
sequence
Length = 711
Score = 150 bits (323), Expect(2) = 8e-059
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +2 / +3
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG+ IGFDGL +PD VA+ AV+AF++A
Sbjct: 201 YCDSSNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFDGLRNPDRVAQDAVVAFKTA 380
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+W NNVHG + G G
Sbjct: 381 LWFWTNNVHGVMSQGFG 431
Score = 111 bits (238), Expect(2) = 1e-038
Identities = 52/79 (65%), Positives = 56/79 (70%)
Frame = -3 / -3
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTL +Q QSA NA+TA AT SG SPSKPM PAGP*L F EICSGPRP*
Sbjct: 430 PNPCDITPCTLLVQNQSAVLNATTASCATLSGFRSPSKPMSLPAGP*L*FHEICSGPRP* 251
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 250 YF*PAAHGHCLLLESQ*AL 194
Score = 98.2 bits (208), Expect(2) = 8e-059
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = +2 / +3
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC*MFSLSLGC 700
V QGFGATIRAINGALEC+GKN +N RV YY+Q+CQ GVDPG NLTC*+ +
Sbjct: 411 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYRQYCQQLGVDPGPNLTC*VARRAASA 590
Query: 701 CPV 709
P+
Sbjct: 591 SPL 599
Score = 69.8 bits (146), Expect(2) = 1e-038
Identities = 32/47 (68%), Positives = 32/47 (68%)
Frame = -3 / -3
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP WQ CL** TR FLP HS APLMA MVAP P
Sbjct: 562 QVRLGPGSTPSCWQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 422
>gb|CD226807.1|CD226807 CCC1_48_C11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_48_C11_A007 3', mRNA sequence
Length = 598
Score = 150 bits (323), Expect(2) = 8e-059
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +2 / +1
Query: 305 YCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSA 484
YCD +N QWPC AG+ YYGRGPLQISWN+NYGPAG+ IGFDGL +PD VA+ AV+AF++A
Sbjct: 28 YCDSSNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFDGLRNPDRVAQDAVVAFKTA 207
Query: 485 LWYWMNNVHGAIVSGQG 535
LW+W NNVHG + G G
Sbjct: 208 LWFWTNNVHGVMSQGFG 258
Score = 111 bits (238), Expect(2) = 1e-038
Identities = 52/79 (65%), Positives = 56/79 (70%)
Frame = -3 / -3
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P + PCTL +Q QSA NA+TA AT SG SPSKPM PAGP*L F EICSGPRP*
Sbjct: 257 PNPCDITPCTLLVQNQSAVLNATTASCATLSGFRSPSKPMSLPAGP*L*FHEICSGPRP* 78
Query: 354 YPFPAWHGHCVLFRSQ*FL 298
Y PA HGHC+L SQ* L
Sbjct: 77 YF*PAAHGHCLLLESQ*AL 21
Score = 98.2 bits (208), Expect(2) = 8e-059
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = +2 / +1
Query: 521 VSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC*MFSLSLGC 700
V QGFGATIRAINGALEC+GKN +N RV YY+Q+CQ GVDPG NLTC*+ +
Sbjct: 238 VMSQGFGATIRAINGALECNGKNTAQMNARVGYYRQYCQQLGVDPGPNLTC*VARRAASA 417
Query: 701 CPV 709
P+
Sbjct: 418 SPL 426
Score = 69.8 bits (146), Expect(2) = 1e-038
Identities = 32/47 (68%), Positives = 32/47 (68%)
Frame = -3 / -3
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKP 532
QVRL PGSTP WQ CL** TR FLP HS APLMA MVAP P
Sbjct: 389 QVRLGPGSTPSCWQYCL**PTRAFIWAVFLPLHSRAPLMALMVAPNP 249
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 677,916,029
Number of Sequences: 832831
Number of extensions: 9127424
Number of successful extensions: 109586
Number of sequences better than 1.0e-020: 222
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 26495451086
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)