TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4548790.2.1
(1044 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF429993.1|CF429993 PH1_25_G07.g1_A002 Phosphorous-defic... 424 e-129
gb|BI140900.1|BI140900 IP1_40_E08.b1_A002 Immature pannicle... 357 e-120
gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stres... 308 e-105
gb|CN142714.1|CN142714 WOUND1_11_F01.g1_A002 Wounded leaves... 317 8e-097
gb|DN551840.1|DN551840 pSPR-RT-A-H2_G06_S131 pSPR Sorghum p... 285 3e-094
gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots S... 248 5e-087
gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-defic... 240 1e-084
gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stres... 306 4e-082
gb|CD231880.1|CD231880 SS1_30_D11.g1_A012 Salt-stressed see... 219 7e-078
gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots ... 255 2e-077
gb|CN124528.1|CN124528 RHOH1_5_H07.b1_A002 Acid- and alkali... 230 8e-074
gb|BI245987.1|BI245987 IP1_66_C05.b1_A002 Immature pannicle... 240 9e-074
gb|CW214676.1|CW214676 104_646_11194139_148_37052_036 Sorgh... 227 2e-071
gb|CF429238.1|CF429238 PH1_20_C06.g1_A002 Phosphorous-defic... 196 3e-069
gb|CW030261.1|CW030261 104_258_10500149_114_30403 Sorghum m... 250 1e-068
gb|CD204043.1|CD204043 HS1_3_A10.g1_A012 Heat-shocked seedl... 185 3e-068
gb|CW408701.1|CW408701 fsbb001f102l07k0 Sorghum methylation... 172 4e-065
gb|CW231485.1|CW231485 104_680_11211147_116_37343_004 Sorgh... 243 3e-064
gb|CW348698.1|CW348698 fsbb001f009c21k0 Sorghum methylation... 146 2e-061
gb|CN127175.1|CN127175 RHOH1_21_B02.g3_A002 Acid- and alkal... 166 2e-061
gb|CW083024.1|CW083024 104_425_10944087_114_32388_060 Sorgh... 178 6e-060
gb|CW083023.1|CW083023 104_425_10944087_114_32352_060 Sorgh... 178 6e-060
gb|CW348697.1|CW348697 fsbb001f009c21f0 Sorghum methylation... 146 1e-059
gb|CW159464.1|CW159464 104_565_11149372_116_36410_006 Sorgh... 171 4e-059
gb|CW246309.1|CW246309 104_707_11221289_116_35084_077 Sorgh... 163 3e-058
gb|BI075831.1|BI075831 IP1_21_G05.b1_A002 Immature pannicle... 179 4e-058
gb|CN144206.1|CN144206 WOUND1_20_G04.g1_A002 Wounded leaves... 152 4e-058
gb|CW210014.1|CW210014 104_640_11189567_148_36998_092 Sorgh... 172 2e-056
gb|CW330582.1|CW330582 104_827_11480451_116_36011_006 Sorgh... 146 6e-056
gb|CW079162.1|CW079162 104_398_10899280_114_32367_050 Sorgh... 151 1e-055
gb|CW409489.1|CW409489 fsbb001f103n01f0 Sorghum methylation... 166 2e-055
gb|BG240827.1|BG240827 OV1_38_G09.g1_A002 Ovary 1 (OV1) Sor... 210 8e-055
gb|BG556631.1|BG556631 EM1_37_F06.b1_A002 Embryo 1 (EM1) So... 129 2e-054
gb|BE917749.1|BE917749 OV1_6_F07.b1_A002 Ovary 1 (OV1) Sorg... 137 3e-054
gb|CX620549.1|CX620549 GABR1_52_C02.g1_A002 GA- or brassino... 140 3e-054
gb|BG355452.1|BG355452 EM1_16_F05.b1_A002 Embryo 1 (EM1) So... 137 5e-054
gb|BG052144.1|BG052144 RHIZ2_6_F11.b1_A003 Rhizome2 (RHIZ2)... 137 5e-054
gb|CD230048.1|CD230048 SS1_40_H09.g1_A012 Salt-stressed see... 136 9e-054
gb|CW448128.1|CW448128 fsbb001f181j14k0 Sorghum methylation... 203 2e-053
gb|BE361754.1|BE361754 DG1_82_G01.b1_A002 Dark Grown 1 (DG1... 134 5e-053
gb|CN139871.1|CN139871 OX1_24_D09.g1_A002 Oxidatively-stres... 120 1e-052
gb|CL195140.1|CL195140 104_420_10942159_114_32302_028 Sorgh... 160 3e-052
gb|CN151326.1|CN151326 WOUND1_74_G01.g1_A002 Wounded leaves... 129 6e-052
gb|CX607108.1|CX607108 ANR1_6_F04.g1_A002 Anaerobic roots S... 178 8e-052
gb|CW487002.1|CW487002 fsbb001f252j13f0 Sorghum methylation... 139 8e-050
gb|CW416746.1|CW416746 fsbb001f117h02f0 Sorghum methylation... 183 9e-050
gb|CW330583.1|CW330583 104_827_11480451_148_36012_006 Sorgh... 146 3e-048
gb|CW079177.1|CW079177 104_399_10899353_114_32392_079 Sorgh... 121 3e-048
gb|CN137045.1|CN137045 OX1_54_H01.g1_A002 Oxidatively-stres... 120 4e-048
gb|CX616057.1|CX616057 GABR1_25_C11.g1_A002 GA- or brassino... 116 1e-047
gb|BG557469.1|BG557469 EM1_44_E12.b1_A002 Embryo 1 (EM1) So... 152 3e-047
gb|CW174639.1|CW174639 104_586_11157513_148_36559_033 Sorgh... 175 9e-047
gb|CW306553.1|CW306553 104_792_11466904_148_35716_060 Sorgh... 171 2e-046
gb|CW143277.1|CW143277 104_535_11137329_148_34958_047 Sorgh... 187 2e-046
gb|CW318661.1|CW318661 104_811_11474070_148_35883_031 Sorgh... 187 2e-046
gb|CW473161.1|CW473161 fsbb001f228g21f0 Sorghum methylation... 143 3e-046
gb|CW340688.1|CW340688 104_841_11485928_148_36148_018 Sorgh... 126 3e-046
gb|CW038341.1|CW038341 104_270_10504868_114_30385 Sorghum m... 186 5e-046
gb|CW075930.1|CW075930 104_363_10809810_114_31800_258 Sorgh... 186 5e-046
gb|CN139792.1|CN139792 OX1_24_D09.b1_A002 Oxidatively-stres... 123 5e-046
gb|CW126001.1|CW126001 104_506_11112648_148_34725_088 Sorgh... 113 5e-046
gb|CD432827.1|CD432827 ETH1_33_A06.g1_A002 Ethylene-treated... 110 5e-046
gb|CW045316.1|CW045316 104_281_10509483_114_30236 Sorghum m... 135 1e-045
gb|CL172101.1|CL172101 104_374_10889911_148_31774_199 Sorgh... 184 2e-045
gb|CW075931.1|CW075931 104_363_10809810_116_31801_258 Sorgh... 183 3e-045
gb|CN127089.1|CN127089 RHOH1_21_B02.b1_A002 Acid- and alkal... 183 3e-045
gb|BG049384.1|BG049384 OV1_19_C06.g1_A002 Ovary 1 (OV1) Sor... 112 6e-045
gb|CN146336.1|CN146336 WOUND1_39_D07.g1_A002 Wounded leaves... 153 1e-044
gb|CW371631.1|CW371631 fsbb001f047d01f0 Sorghum methylation... 127 2e-044
gb|AW671351.1|AW671351 LG1_335_D11.b1_A002 Light Grown 1 (L... 86 2e-044
gb|CW204510.1|CW204510 104_632_11186581_116_37060_055 Sorgh... 111 9e-044
gb|CW386714.1|CW386714 fsbb001f070m01f0 Sorghum methylation... 178 1e-043
gb|CW392760.1|CW392760 fsbb001f079i10f0 Sorghum methylation... 122 1e-043
gb|CN142636.1|CN142636 WOUND1_11_F01.b1_A002 Wounded leaves... 171 1e-043
gb|CW318660.1|CW318660 104_811_11474070_116_35879_031 Sorgh... 129 2e-043
gb|CW059494.1|CW059494 104_302_10519350_114_30165 Sorghum m... 177 3e-043
gb|BE917670.1|BE917670 OV1_6_F07.g1_A002 Ovary 1 (OV1) Sorg... 177 3e-043
gb|CW126910.1|CW126910 104_507_11113147_148_34730_068 Sorgh... 110 3e-043
gb|CW452245.1|CW452245 fsbb001f192l01f0 Sorghum methylation... 119 1e-042
gb|CW221659.1|CW221659 104_656_11198028_148_37170_034 Sorgh... 112 1e-042
gb|CL172100.1|CL172100 104_374_10889911_116_31775_199 Sorgh... 130 1e-042
gb|CW355038.1|CW355038 fsbb001f019i03k0 Sorghum methylation... 127 1e-042
gb|CW038342.1|CW038342 104_270_10504868_115_30386 Sorghum m... 127 1e-042
gb|CL192764.1|CL192764 104_415_10940470_114_32264_081 Sorgh... 105 1e-042
gb|CW027693.1|CW027693 104_254_10498658_114_30395 Sorghum m... 136 2e-042
gb|CW449996.1|CW449996 fsbb001f188g15k0 Sorghum methylation... 156 4e-042
gb|CW204094.1|CW204094 104_632_11186356_148_36919_016 Sorgh... 172 6e-042
gb|CL171843.1|CL171843 104_374_10889716_116_31775_004 Sorgh... 109 7e-042
gb|CW379038.1|CW379038 fsbb001f058b16f0 Sorghum methylation... 125 9e-042
gb|CW204093.1|CW204093 104_632_11186356_116_36920_016 Sorgh... 154 1e-041
gb|CX610991.1|CX610991 ANR1_22_B08.b1_A002 Anaerobic roots ... 171 2e-041
gb|CN151243.1|CN151243 WOUND1_74_G01.b1_A002 Wounded leaves... 171 2e-041
gb|BG463957.1|BG463957 EM1_52_H10.b1_A002 Embryo 1 (EM1) So... 93 4e-041
gb|CW362025.1|CW362025 fsbb001f030o09f0 Sorghum methylation... 93 4e-041
gb|CX607022.1|CX607022 ANR1_6_F04.b1_A002 Anaerobic roots S... 169 8e-041
gb|CW029128.1|CW029128 104_256_10499499_114_30399 Sorghum m... 127 9e-041
gb|AW564506.1|AW564506 LG1_295_D10.b1_A002 Light Grown 1 (L... 129 2e-040
gb|CF429142.1|CF429142 PH1_20_C06.b1_A002 Phosphorous-defic... 167 3e-040
gb|BG464039.1|BG464039 EM1_52_H10.g1_A002 Embryo 1 (EM1) So... 166 7e-040
gb|CN146258.1|CN146258 WOUND1_39_D07.b1_A002 Wounded leaves... 166 7e-040
gb|BE360794.1|BE360794 DG1_67_C05.b2_A002 Dark Grown 1 (DG1... 89 1e-039
gb|BG047611.1|BG047611 OV1_26_A06.b1_A002 Ovary 1 (OV1) Sor... 90 1e-039
gb|BG412450.1|BG412450 OV2_34_C12.g1_A002 Ovary 2 (OV2) Sor... 100 1e-039
gb|CN134486.1|CN134486 OX1_26_D09.g1_A002 Oxidatively-stres... 89 2e-039
gb|CW122718.1|CW122718 104_501_11110823_148_34673_084 Sorgh... 161 1e-038
gb|AW286643.1|AW286643 LG1_335_D11.g1_A002 Light Grown 1 (L... 144 2e-038
gb|CW220361.1|CW220361 104_655_11197308_116_37156_048 Sorgh... 159 6e-038
gb|CW220362.1|CW220362 104_655_11197308_148_37155_048 Sorgh... 159 6e-038
gb|CW481549.1|CW481549 fsbb001f241d06f0 Sorghum methylation... 156 4e-037
gb|CW136107.1|CW136107 104_521_11118204_116_34845_048 Sorgh... 109 6e-037
gb|CW294638.1|CW294638 104_775_11415292_148_36234_006 Sorgh... 69 6e-037
gb|CL174843.1|CL174843 104_379_10891942_148_31768_310 Sorgh... 88 6e-037
gb|CW340687.1|CW340687 104_841_11485928_116_36149_018 Sorgh... 126 5e-036
gb|CW306552.1|CW306552 104_792_11466904_116_35712_060 Sorgh... 92 8e-036
gb|BG355581.2|BG355581 EM1_19_F04.b1_A002 Embryo 1 (EM1) So... 91 1e-035
gb|CW426483.1|CW426483 fsbb001f137o10k0 Sorghum methylation... 100 1e-035
gb|CL177978.1|CL177978 104_385_10894229_116_31914_293 Sorgh... 100 1e-035
gb|CW325048.1|CW325048 104_819_11477484_116_35915_034 Sorgh... 100 1e-035
gb|CW372792.1|CW372792 fsbb001f048n17k0 Sorghum methylation... 148 2e-034
gb|CL159581.1|CL159581 104_349_10804357_116_31382_181 Sorgh... 54 3e-034
gb|CW215800.1|CW215800 104_648_11194751_116_37117_092 Sorgh... 145 1e-033
gb|BG356043.2|BG356043 EM1_19_F04.g1_A002 Embryo 1 (EM1) So... 132 1e-033
gb|CW179633.1|CW179633 104_593_11160203_116_36623_034 Sorgh... 79 2e-033
gb|CX606996.1|CX606996 ANR1_6_C12.b1_A002 Anaerobic roots S... 143 6e-033
gb|CW163410.1|CW163410 104_571_11151445_148_36458_063 Sorgh... 78 7e-033
gb|CW215801.1|CW215801 104_648_11194751_148_37118_092 Sorgh... 142 8e-033
gb|CW482801.1|CW482801 fsbb001f244b09f0 Sorghum methylation... 83 1e-032
gb|CW471323.1|CW471323 fsbb001f225c11k0 Sorghum methylation... 58 2e-032
gb|CW067086.1|CW067086 104_314_10524055_114_30126 Sorghum m... 81 2e-032
gb|CW471322.1|CW471322 fsbb001f225c11f0 Sorghum methylation... 83 1e-031
gb|CW177877.1|CW177877 104_591_11159265_116_36611_041 Sorgh... 138 1e-031
gb|CW132505.1|CW132505 104_515_11116248_116_34797_082 Sorgh... 137 4e-031
gb|BZ341425.1|BZ341425 ic45c08.b1 WGS-SbicolorF (JM107 adap... 89 4e-031
gb|CW135331.1|CW135331 104_519_11117788_148_34827_002 Sorgh... 136 5e-031
gb|CX623191.1|CX623191 GABR1_68_F03.b1_A002 GA- or brassino... 135 9e-031
gb|CW201862.1|CW201862 104_627_11184792_116_37108_082 Sorgh... 133 3e-030
gb|CW448127.1|CW448127 fsbb001f181j14f0 Sorghum methylation... 133 5e-030
gb|BG054373.1|BG054373 OV2_3_F03.b1_A002 Ovary 2 (OV2) Sorg... 80 6e-030
gb|CW136108.1|CW136108 104_521_11118204_148_34841_048 Sorgh... 73 7e-030
gb|BG240213.1|BG240213 OV1_19_C06.b1_A002 Ovary 1 (OV1) Sor... 53 8e-030
gb|CN141202.1|CN141202 OX1_50_A06.b1_A002 Oxidatively-stres... 84 1e-029
gb|CW230206.1|CW230206 104_671_11207725_116_37267_049 Sorgh... 83 1e-029
gb|CW072097.1|CW072097 104_325_10592073_114_30535 Sorghum m... 131 2e-029
gb|CL150304.1|CL150304 104_331_10778427_116_31356_363 Sorgh... 53 2e-029
gb|CW146462.1|CW146462 104_539_11139005_148_34986_025 Sorgh... 131 2e-029
gb|BZ351065.1|BZ351065 hv18a09.g1 WGS-SbicolorF (JM107 adap... 130 3e-029
gb|CW381842.1|CW381842 fsbb001f063g24k0 Sorghum methylation... 84 4e-029
gb|CW107276.1|CW107276 104_477_11096492_148_34473_074 Sorgh... 71 2e-028
gb|BG556164.1|BG556164 EM1_68_E09.b1_A002 Embryo 1 (EM1) So... 67 3e-028
gb|CW045027.1|CW045027 104_281_10509311_114_30236 Sorghum m... 126 7e-028
gb|CW056377.1|CW056377 104_298_10517649_115_30157 Sorghum m... 126 7e-028
gb|CW069981.1|CW069981 104_320_10526365_1_30089 Sorghum met... 126 7e-028
gb|CW216041.1|CW216041 104_648_11194902_148_37115_019 Sorgh... 126 7e-028
gb|CW412412.1|CW412412 fsbb001f108a17k0 Sorghum methylation... 126 7e-028
gb|CW214760.1|CW214760 104_646_11194182_116_37049_017 Sorgh... 66 9e-028
gb|CW045028.1|CW045028 104_281_10509311_115_30232 Sorghum m... 65 1e-027
gb|CW433351.1|CW433351 fsbb001f148i13f0 Sorghum methylation... 125 1e-027
gb|BG355666.1|BG355666 EM1_16_F05.g1_A002 Embryo 1 (EM1) So... 124 2e-027
gb|BG411337.1|BG411337 EM1_20_F03.b1_A002 Embryo 1 (EM1) So... 85 2e-027
gb|CW345705.1|CW345705 104_848_11488642_116_36212_033 Sorgh... 111 6e-027
gb|BG412749.1|BG412749 OV2_34_C12.b1_A002 Ovary 2 (OV2) Sor... 100 2e-026
gb|CW170395.1|CW170395 104_580_11155184_148_36515_020 Sorgh... 73 2e-026
gb|BG052868.1|BG052868 RHIZ2_15_B11.g1_A003 Rhizome2 (RHIZ2... 120 5e-026
gb|CL192765.1|CL192765 104_415_10940470_116_32261_081 Sorgh... 119 6e-026
gb|BG817383.1|BG817383 EM1_75_B09.b1_A002 Embryo 1 (EM1) So... 67 2e-025
gb|BG557781.1|BG557781 EM1_53_A06.b1_A002 Embryo 1 (EM1) So... 58 2e-025
gb|CW479320.1|CW479320 fsbb001f237l21f0 Sorghum methylation... 117 2e-025
gb|CF429677.1|CF429677 PH1_23_G06.g1_A002 Phosphorous-defic... 58 4e-025
gb|BG102282.1|BG102282 RHIZ2_24_D04.b1_A003 Rhizome2 (RHIZ2... 58 4e-025
gb|CF430219.1|CF430219 PH1_27_A08.b1_A002 Phosphorous-defic... 116 4e-025
gb|CW260112.1|CW260112 104_726_11228790_148_35187_019 Sorgh... 88 5e-025
gb|CL155278.1|CL155278 104_341_10782016_114_31471_112 Sorgh... 49 5e-025
gb|BG557559.1|BG557559 EM1_53_A06.g1_A002 Embryo 1 (EM1) So... 116 8e-025
gb|CW166190.1|CW166190 104_574_11152918_116_36483_081 Sorgh... 115 1e-024
gb|BG356953.1|BG356953 OV2_12_A12.g1_A002 Ovary 2 (OV2) Sor... 101 2e-024
gb|BG051930.1|BG051930 RHIZ2_6_F11.g1_A003 Rhizome2 (RHIZ2)... 113 5e-024
gb|CW421780.1|CW421780 fsbb001f130l24f0 Sorghum methylation... 56 2e-023
gb|CW151902.1|CW151902 104_552_11144196_148_36321_034 Sorgh... 110 5e-023
gb|CF431886.1|CF431886 NIT1_11_C08.b1_A002 Nitrogen-deficie... 92 7e-023
gb|CW470839.1|CW470839 fsbb001f224e15k0 Sorghum methylation... 108 1e-022
gb|CW179534.1|CW179534 104_593_11160150_148_36628_019 Sorgh... 56 2e-022
gb|BF421232.1|BF421232 FM1_7_B08.g1_A003 Floral-Induced Mer... 107 2e-022
gb|BG052938.1|BG052938 RHIZ2_15_B11.b1_A003 Rhizome2 (RHIZ2... 58 3e-022
gb|CW366416.1|CW366416 fsbb001f039g15f0 Sorghum methylation... 49 7e-022
gb|CW190097.1|CW190097 104_611_11174316_116_36748_038 Sorgh... 49 7e-022
gb|CW345706.1|CW345706 104_848_11488642_148_36211_033 Sorgh... 83 8e-022
gb|CW216040.1|CW216040 104_648_11194902_116_37116_019 Sorgh... 49 1e-021
gb|BG051375.1|BG051375 FM1_55_G05.g1_A003 Floral-Induced Me... 105 2e-021
gb|BG355480.1|BG355480 EM1_17_A05.b1_A002 Embryo 1 (EM1) So... 67 3e-021
gb|BG322688.1|BG322688 EM1_13_B01.b1_A002 Embryo 1 (EM1) So... 67 3e-021
gb|CF431288.1|CF431288 NIT1_5_F12.b1_A002 Nitrogen-deficien... 104 3e-021
gb|CL151550.1|CL151550 104_334_10779327_116_31362_111 Sorgh... 80 5e-021
>gb|CF429993.1|CF429993 PH1_25_G07.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_G07_A002 5', mRNA sequence
Length = 823
Score = 424 bits (921), Expect(2) = e-129
Identities = 165/177 (93%), Positives = 170/177 (96%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGWRWCRPGRPSILVTATNFCPPNYAL 283
SQGYGVNNAAL TALF+EGL CGACFE++CE PGWRWCRPG PSILVTATNFCPPNYAL
Sbjct: 291 SQGYGVNNAALGTALFNEGLSCGACFELKCENHPGWRWCRPGSPSILVTATNFCPPNYAL 470
Query: 284 PSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNL 463
PSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNL
Sbjct: 471 PSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNL 650
Query: 464 VLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQALSFRVTASDRRT 634
VLITNVAGAGD+VRASVKA+STGWL MSRNWGQNWQSNAILVGQALSFRVT SDRRT
Sbjct: 651 VLITNVAGAGDIVRASVKASSTGWLTMSRNWGQNWQSNAILVGQALSFRVTGSDRRT 821
Score = 394 bits (854), Expect = e-108
Identities = 164/187 (87%), Positives = 167/187 (89%)
Frame = -1 / -1
Query: 636 EVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRL 457
EVRRSL VTRKESAWPTRMALDCQFWPQF DM SHPVL A TLART SPAPATFVISTRL
Sbjct: 823 EVRRSLPVTRKESAWPTRMALDCQFWPQFRDMVSHPVLDAFTLARTMSPAPATFVISTRL 644
Query: 456 KYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA 277
KYRKPL+VNRTPPD RHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA
Sbjct: 643 KYRKPLMVNRTPPDFRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA 464
Query: 276 *LGGQKLVAVTRMEGLPGRHHRHPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQ 97
* GGQKLVAVTRMEGLPGRHHRHPG SHL SKHAPQ PS NSAV SAALFTPYPWL +
Sbjct: 463 *FGGQKLVAVTRMEGLPGRHHRHPGWFSHLSSKHAPQLRPSLNSAVPSAALFTPYPWLYR 284
Query: 96 VAVPAGP 76
+ P P
Sbjct: 283 LP*PHAP 263
Score = 169 bits (363), Expect(3) = 5e-054
Identities = 71/80 (88%), Positives = 71/80 (88%)
Frame = -3 / -3
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
LADEDGVGLPVLAPVPGHGQPPGAGRL ARAH V RAGHVRDQHQVEVPEAVD EPH A
Sbjct: 782 LADEDGVGLPVLAPVPGHGQPPGAGRLHARAHDVTRAGHVRDQHQVEVPEAVDGEPHAA* 603
Query: 415 LAARHPAVGDGHDAGAVLGD 356
L A HPAVGDG DAGAVLGD
Sbjct: 602 LPAWHPAVGDGDDAGAVLGD 543
Score = 78.5 bits (165), Expect(5) = 3e-039
Identities = 32/40 (80%), Positives = 32/40 (80%)
Frame = +3 / +1
Query: 399 GCRAASPAGCGSQSTASGTSTWC*SRTWPARGTWCARASR 518
GC A S A CGS STASGTSTWC*SRTWPAR T CARA R
Sbjct: 586 GCHAGSQAACGSPSTASGTSTWC*SRTWPARVTSCARA*R 705
Score = 58.8 bits (122), Expect(2) = e-129
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +3
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGGSDA G MGGACGYGNL G
Sbjct: 216 AHATFYGGSDASGTMGGACGYGNLYSQG 299
Score = 53.8 bits (111), Expect(5) = 3e-039
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +1 / +2
Query: 103 QPGVRREQRGAEHGAVRRGAPLRRVL 180
QPGVRREQRGA HGAV+RG+ LRRVL
Sbjct: 290 QPGVRREQRGAGHGAVQRGSELRRVL 367
Score = 52.4 bits (108), Expect(5) = 3e-039
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +1 / +2
Query: 532 VAAHVQELGPELAVQRHPRRPGA 600
VA HV ELGPELAVQRHPRRPGA
Sbjct: 719 VADHVPELGPELAVQRHPRRPGA 787
Score = 50.6 bits (104), Expect(3) = 5e-054
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -2 / -1
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACA 27
P +RLP P APP+ P+ASLPP*NVACA
Sbjct: 298 PWLYRLP*PHAPPMVPEASLPP*NVACA 215
Score = 36.8 bits (74), Expect(3) = 5e-054
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -2 / -2
Query: 140 CSAPRCSRRTPGC 102
C APRCSRRTPGC
Sbjct: 327 CPAPRCSRRTPGC 289
Score = 35.9 bits (72), Expect(5) = 3e-039
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / +2
Query: 27 RARHVLRRQRRFWLYGRGLRVRQPV 101
RARHVLRRQ R +GR +R+ QPV
Sbjct: 215 RARHVLRRQ*RLGHHGRRVRLWQPV 289
Score = 22.1 bits (42), Expect(5) = 3e-039
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1 / +2
Query: 229 EALHPGHGH 255
E LHPG GH
Sbjct: 416 EPLHPGDGH 442
>gb|BI140900.1|BI140900 IP1_40_E08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 622
Score = 357 bits (774), Expect(3) = e-120
Identities = 141/147 (95%), Positives = 143/147 (97%)
Frame = +2 / +2
Query: 203 PGWRWCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIV 382
PG RWCRPG PSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIV
Sbjct: 182 PGGRWCRPGSPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIV 361
Query: 383 PVSYRRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQ 562
PVSYRRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGD+VRASVKA+STGWL MSRNWGQ
Sbjct: 362 PVSYRRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKASSTGWLTMSRNWGQ 541
Query: 563 NWQSNAILVGQALSFRVTASDRRTSTS 643
NWQSNAILVGQALSFRVT SDRRTSTS
Sbjct: 542 NWQSNAILVGQALSFRVTGSDRRTSTS 622
Score = 330 bits (716), Expect(3) = e-104
Identities = 136/147 (92%), Positives = 138/147 (93%)
Frame = -1 / -2
Query: 642 EVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPATFVIST 463
+VEVRRSL VTRKESAWPTRMALDCQFWPQF DM SHPVL A TLART SPAPATFVIST
Sbjct: 621 DVEVRRSLPVTRKESAWPTRMALDCQFWPQFRDMVSHPVLDAFTLARTMSPAPATFVIST 442
Query: 462 RLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEG 283
RLKYRKPL+VNRTPPD RHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEG
Sbjct: 441 RLKYRKPLMVNRTPPDFRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEG 262
Query: 282 SA*LGGQKLVAVTRMEGLPGRHHRHPG 202
SA* GGQKLVAVTRMEGLPGRHHR PG
Sbjct: 261 SA*FGGQKLVAVTRMEGLPGRHHRPPG 181
Score = 169 bits (363), Expect(2) = 4e-058
Identities = 71/80 (88%), Positives = 71/80 (88%)
Frame = -3 / -1
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
LADEDGVGLPVLAPVPGHGQPPGAGRL ARAH V RAGHVRDQHQVEVPEAVD EPH A
Sbjct: 574 LADEDGVGLPVLAPVPGHGQPPGAGRLHARAHDVTRAGHVRDQHQVEVPEAVDGEPHAA* 395
Query: 415 LAARHPAVGDGHDAGAVLGD 356
L A HPAVGDG DAGAVLGD
Sbjct: 394 LPAWHPAVGDGDDAGAVLGD 335
Score = 87.7 bits (185), Expect(5) = 3e-050
Identities = 33/44 (75%), Positives = 36/44 (81%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGWRWCRPGRP 235
SQGYGVNNAALSTALF+EGL CGACFE++CE QPGW P P
Sbjct: 82 SQGYGVNNAALSTALFNEGLSCGACFELKCENQPGWAVVPPREP 213
Score = 78.5 bits (165), Expect(5) = 3e-050
Identities = 32/40 (80%), Positives = 32/40 (80%)
Frame = +3 / +3
Query: 399 GCRAASPAGCGSQSTASGTSTWC*SRTWPARGTWCARASR 518
GC A S A CGS STASGTSTWC*SRTWPAR T CARA R
Sbjct: 378 GCHAGSQAACGSPSTASGTSTWC*SRTWPARVTSCARA*R 497
Score = 78.0 bits (164), Expect(2) = 4e-058
Identities = 37/70 (52%), Positives = 41/70 (58%)
Frame = -1 / -3
Query: 285 GSA*LGGQKLVAVTRMEGLPGRHHRHPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPW 106
G+ L G+ G G HPG SHL SKHAPQ PS NSAVLSAALFTPYPW
Sbjct: 263 GARSLAGRSWWPSPGWRGSRGGTTAHPGWFSHLSSKHAPQLRPSLNSAVLSAALFTPYPW 84
Query: 105 LSQVAVPAGP 76
L ++ P P
Sbjct: 83 LYRLP*PHAP 54
Score = 59.3 bits (123), Expect(3) = e-120
Identities = 23/29 (79%), Positives = 23/29 (79%)
Frame = +1 / +1
Query: 25 RAHATFYGGSDAFGFMGGACGYGNL*QPG 111
R HATFYGGSDA G MGGACGYGNL G
Sbjct: 4 RGHATFYGGSDASGTMGGACGYGNLYSQG 90
Score = 57.0 bits (118), Expect(3) = e-120
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +1 / +3
Query: 103 QPGVRREQRGAEHGAVRRGAPLRRVL 180
QPGVRREQRGAEHGAV+RG+ LRRVL
Sbjct: 81 QPGVRREQRGAEHGAVQRGSELRRVL 158
Score = 52.4 bits (108), Expect(5) = 3e-050
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +1 / +1
Query: 532 VAAHVQELGPELAVQRHPRRPGA 600
VA HV ELGPELAVQRHPRRPGA
Sbjct: 511 VADHVPELGPELAVQRHPRRPGA 579
Score = 50.6 bits (104), Expect(3) = e-104
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -2 / -3
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACAR 24
P +RLP P APP+ P+ASLPP*NVAC R
Sbjct: 89 PWLYRLP*PHAPPMVPEASLPP*NVACPR 3
Score = 39.1 bits (79), Expect(3) = e-104
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2 / -1
Query: 140 CSAPRCSRRTPGC 102
CSAPRCSRRTPGC
Sbjct: 118 CSAPRCSRRTPGC 80
Score = 38.2 bits (77), Expect(5) = 3e-050
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3 / +3
Query: 24 TRARHVLRRQRRFWLYGRGLRVRQPV 101
TRARHVLRRQ R +GR +R+ QPV
Sbjct: 3 TRARHVLRRQ*RLGHHGRRVRLWQPV 80
Score = 22.1 bits (42), Expect(5) = 3e-050
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1 / +1
Query: 229 EALHPGHGH 255
E LHPG GH
Sbjct: 208 EPLHPGDGH 234
>gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 5', mRNA sequence
Length = 840
Score = 308 bits (668), Expect(3) = e-105
Identities = 119/155 (76%), Positives = 132/155 (85%)
Frame = +2 / +1
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
+I VTATNFCPPNY LPSDDGGWCNPPRPHFD+A P FL IA+YRAGIVPV+YRRVPC K
Sbjct: 370 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 549
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GG+RFTING YFNLVL+TNVAGAGDV S+K +STGW PMSRNWGQNWQSN++L GQ
Sbjct: 550 KGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQ 729
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNF 700
+LSF+VTASD RT TS AP+ WQFGQTFEG F
Sbjct: 730 SLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQF 834
Score = 233 bits (503), Expect(3) = 1e-069
Identities = 104/151 (68%), Positives = 107/151 (70%)
Frame = -1 / -2
Query: 690 PSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALT 511
PSKVWPNCQ GA V VR SLAVT KE WP+R L CQFWPQF DMG HPVL L
Sbjct: 824 PSKVWPNCQPAGATPLLVTVRPSLAVTWKERLWPSRSELLCQFWPQFRDMGCHPVLEPLM 645
Query: 510 LARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMAR 331
TSPAPAT V STRLK PL+VNR PP HGT * TGTMPARY A+WR G A
Sbjct: 644 ETDCTSPAPATLVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRKAGCAM 465
Query: 330 SKCGRGGLHQPPSSEGSA*LGGQKLVAVTRM 238
SKCGRGGLHQPPSS G *LGGQKLVAVT M
Sbjct: 464 SKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 372
Score = 133 bits (286), Expect(2) = 5e-036
Identities = 59/80 (73%), Positives = 60/80 (75%)
Frame = -3 / -1
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
LA E+ V LPVLAPVPGHG PPGAG LD HVP AGHV QHQVEV AVD EP PA
Sbjct: 729 LAVEERVALPVLAPVPGHGLPPGAGALDGDGLHVPGAGHVGHQHQVEVGVAVDGEPDPAL 550
Query: 415 LAARHPAVGDGHDAGAVLGD 356
L ARHP VGDGHDAGAVL D
Sbjct: 549 LHARHPPVGDGHDAGAVLRD 490
Score = 58.3 bits (121), Expect(3) = e-105
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCE 196
S GYG N AALSTALF++G CG+C+E+RC+
Sbjct: 250 STGYGTNTAALSTALFNDGAACGSCYELRCD 342
Score = 56.1 bits (116), Expect(3) = e-105
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGN+ G
Sbjct: 175 AHATFYGGGDASGTMGGACGYGNMYSTG 258
Score = 42.8 bits (87), Expect(3) = 1e-069
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = -2 / -2
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACA 27
P + PYP APPI P AS PP*NVA A
Sbjct: 257 PVLYMFPYPHAPPIVPDASPPP*NVAWA 174
Score = 42.3 bits (86), Expect(2) = 5e-036
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = -1 / -2
Query: 171 PQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
P +PS NSAVLSAA+F PYP L P P
Sbjct: 317 PHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAP 222
Score = 28.1 bits (55), Expect(3) = 1e-069
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -3
Query: 140 CSAPRCSRRTPGC 102
CSAP CS RTP C
Sbjct: 286 CSAPPCSCRTPCC 248
>gb|CN142714.1|CN142714 WOUND1_11_F01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_11_F01_A002 5', mRNA sequence
Length = 665
Score = 317 bits (687), Expect(2) = 8e-097
Identities = 121/127 (95%), Positives = 124/127 (97%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGWRWCRPGRPSILVTATNFCPPNYAL 283
SQGYGVNNAALSTALF+EGL CGACFE++CE QPGWRWCRPG PSILVTATNFCPPNYAL
Sbjct: 283 SQGYGVNNAALSTALFNEGLSCGACFELKCENQPGWRWCRPGSPSILVTATNFCPPNYAL 462
Query: 284 PSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNL 463
PSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNL
Sbjct: 463 PSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNL 642
Query: 464 VLITNVA 484
VLITNVA
Sbjct: 643 VLITNVA 663
Score = 293 bits (635), Expect = 2e-078
Identities = 121/137 (88%), Positives = 124/137 (90%)
Frame = -1 / -1
Query: 486 PATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGL 307
PATFVISTRLKYRKPL+VNRTPPD RHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGL
Sbjct: 665 PATFVISTRLKYRKPLMVNRTPPDFRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGL 486
Query: 306 HQPPSSEGSA*LGGQKLVAVTRMEGLPGRHHRHPGCSSHLISKHAPQRSPSSNSAVLSAA 127
HQPPSSEGSA* GGQKLVAVTRMEGLPGRHHRHPG SHL SKHAPQ PS NSAVLSAA
Sbjct: 485 HQPPSSEGSA*FGGQKLVAVTRMEGLPGRHHRHPGWFSHLSSKHAPQLRPSLNSAVLSAA 306
Query: 126 LFTPYPWLSQVAVPAGP 76
LFTPYPWL ++ P P
Sbjct: 305 LFTPYPWLYRLP*PHAP 255
Score = 88.1 bits (186), Expect(3) = 7e-031
Identities = 37/43 (86%), Positives = 37/43 (86%)
Frame = -3 / -3
Query: 484 GHVRDQHQVEVPEAVDCEPHPAGLAARHPAVGDGHDAGAVLGD 356
GHVRDQHQVEVPEAVD EPH A L A HPAVGDG DAGAVLGD
Sbjct: 663 GHVRDQHQVEVPEAVDGEPHAA*LPAWHPAVGDGDDAGAVLGD 535
Score = 64.3 bits (134), Expect(4) = 4e-026
Identities = 24/29 (82%), Positives = 24/29 (82%)
Frame = +3 / +2
Query: 399 GCRAASPAGCGSQSTASGTSTWC*SRTWP 485
GC A S A CGS STASGTSTWC*SRTWP
Sbjct: 578 GCHAGSQAACGSPSTASGTSTWC*SRTWP 664
Score = 58.8 bits (122), Expect(2) = 8e-097
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +1
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGGSDA G MGGACGYGNL G
Sbjct: 208 AHATFYGGSDASGTMGGACGYGNLYSQG 291
Score = 57.0 bits (118), Expect(4) = 4e-026
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +1 / +3
Query: 103 QPGVRREQRGAEHGAVRRGAPLRRVL 180
QPGVRREQRGAEHGAV+RG+ LRRVL
Sbjct: 282 QPGVRREQRGAEHGAVQRGSELRRVL 359
Score = 50.6 bits (104), Expect(3) = 7e-031
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -2 / -1
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACA 27
P +RLP P APP+ P+ASLPP*NVACA
Sbjct: 290 PWLYRLP*PHAPPMVPEASLPP*NVACA 207
Score = 39.1 bits (79), Expect(3) = 7e-031
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2 / -2
Query: 140 CSAPRCSRRTPGC 102
CSAPRCSRRTPGC
Sbjct: 319 CSAPRCSRRTPGC 281
Score = 35.9 bits (72), Expect(4) = 4e-026
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / +3
Query: 27 RARHVLRRQRRFWLYGRGLRVRQPV 101
RARHVLRRQ R +GR +R+ QPV
Sbjct: 207 RARHVLRRQ*RLGHHGRRVRLWQPV 281
Score = 22.1 bits (42), Expect(4) = 4e-026
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1 / +3
Query: 229 EALHPGHGH 255
E LHPG GH
Sbjct: 408 EPLHPGDGH 434
>gb|DN551840.1|DN551840 pSPR-RT-A-H2_G06_S131 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 861
Score = 285 bits (616), Expect(3) = 3e-094
Identities = 109/138 (78%), Positives = 124/138 (89%)
Frame = +2 / +2
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
S+++TATNFCPPNYALPSD GGWCNPPR HFDL+MP FL IA+YRA IVPV+YRRV CRK
Sbjct: 446 SVVITATNFCPPNYALPSDAGGWCNPPRHHFDLSMPAFLRIADYRASIVPVTYRRVACRK 625
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
SGG+RF +NGFRYFNLVLI+NV GAGDVVRA+VKA+ T WLP++RNWGQNWQ ++ILVG
Sbjct: 626 SGGIRFGVNGFRYFNLVLISNVGGAGDVVRAAVKASHTEWLPLARNWGQNWQCSSILVGG 805
Query: 596 ALSFRVTASDRRTSTSWN 649
ALSFRVT SDRRT TSWN
Sbjct: 806 ALSFRVTTSDRRTLTSWN 859
Score = 209 bits (450), Expect(2) = 9e-061
Identities = 98/134 (73%), Positives = 101/134 (75%)
Frame = -1 / -1
Query: 648 FQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPATFVI 469
FQEV VRRSL VTRKESA PTRM L CQF PQ GSH V ALT ARTTSPAP T ++
Sbjct: 858 FQEVRVRRSLVVTRKESAPPTRMELHCQFCPQLRARGSHSVCEALTAARTTSPAPPTLLM 679
Query: 468 STRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSS 289
STRLK RKPL NR PPDLRH T R TGTM AR SAM R GM RSK RGGLH PP+S
Sbjct: 678 STRLK*RKPLTPNRMPPDLRHATLRYVTGTMLAR*SAMRRKAGMERSKWWRGGLHHPPAS 499
Query: 288 EGSA*LGGQKLVAV 247
EGSA*LGGQKLVAV
Sbjct: 498 EGSA*LGGQKLVAV 457
Score = 114 bits (244), Expect(2) = 3e-030
Identities = 51/79 (64%), Positives = 54/79 (68%)
Frame = -3 / -3
Query: 592 ADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAGL 413
A EDG LPVL+PV GQP LD A HV A HV D+HQVEV EAVD EP AGL
Sbjct: 802 AHEDGAALPVLSPVARQGQPLRVRGLDGGADHVAGAAHVADEHQVEVAEAVDAEPDAAGL 623
Query: 412 AARHPAVGDGHDAGAVLGD 356
AARHP V DGHDAGAV+ D
Sbjct: 622 AARHPPVCDGHDAGAVVCD 566
Score = 53.3 bits (110), Expect(3) = 3e-094
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2 / +2
Query: 110 GYGVNNAALSTALFDEGLRCGACFEIRCEEQPG 208
GYG+ ALST LF+ GL CGACFEI+C + G
Sbjct: 311 GYGMATGALSTPLFNNGLTCGACFEIKCSCRSG 409
Score = 48.7 bits (100), Expect(3) = 3e-094
Identities = 19/24 (79%), Positives = 19/24 (79%)
Frame = +1 / +2
Query: 28 AHATFYGGSDAFGFMGGACGYGNL 99
A T YGGSDA G MGGACGYGNL
Sbjct: 230 ATMTMYGGSDASGTMGGACGYGNL 301
Score = 46.9 bits (96), Expect(2) = 9e-061
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = -1 / -1
Query: 216 HRHPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H P HLISK APQ SP S VLSA + PYP + ++ P P
Sbjct: 417 HWQPLLQLHLISKQAPQVSPLLKSGVLSAPVAMPYPAM*RLPYPQAP 277
Score = 42.3 bits (86), Expect(2) = 3e-030
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -2 / -1
Query: 110 PGCHRLPYPQAPPIKPKASLPP 45
P RLPYPQAPP+ P ASLPP
Sbjct: 312 PAM*RLPYPQAPPMVPDASLPP 247
>gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_C12_A002 5', mRNA sequence
Length = 705
Score = 248 bits (536), Expect(3) = 5e-087
Identities = 92/116 (79%), Positives = 102/116 (87%)
Frame = +2 / +3
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
+I VTATNFCPPNY LPSDDGGWCNPPRPHFD+A P FL IA+YRAGIVPV+YRRVPC K
Sbjct: 357 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 536
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAI 583
GG+RFTING YFNLVL+TNVAGAGDV S+K +STGW PMSRNWGQNWQSN++
Sbjct: 537 KGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSL 704
Score = 181 bits (389), Expect(3) = 5e-054
Identities = 79/111 (71%), Positives = 81/111 (72%)
Frame = -1 / -3
Query: 570 CQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR* 391
CQFWPQF DMG HPVL L TSPAPAT V STRLK PL+VNR PP HGT *
Sbjct: 691 CQFWPQFRDMGCHPVLEPLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPFFTHGTLL* 512
Query: 390 ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRM 238
TGTMPARY A+WR G A SKCGRGGLHQPPSS G *LGGQKLVAVT M
Sbjct: 511 ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 359
Score = 129 bits (276), Expect(2) = 9e-035
Identities = 56/74 (75%), Positives = 56/74 (75%)
Frame = -3 / -2
Query: 577 VGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAGLAARHP 398
V LPVLAPVPGHG PPGAG LD HVP AGHV QHQVEV AVD EP PA L ARHP
Sbjct: 698 VALPVLAPVPGHGLPPGAGALDGDGLHVPGAGHVGHQHQVEVGVAVDGEPDPALLHARHP 519
Query: 397 AVGDGHDAGAVLGD 356
VGDGHDAGAVL D
Sbjct: 518 PVGDGHDAGAVLRD 477
Score = 58.3 bits (121), Expect(3) = 5e-087
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCE 196
S GYG N AALSTALF++G CG+C+E+RC+
Sbjct: 237 STGYGTNTAALSTALFNDGAACGSCYELRCD 329
Score = 56.1 bits (116), Expect(3) = 5e-087
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +1 / +3
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGN+ G
Sbjct: 162 AHATFYGGGDASGTMGGACGYGNMYSTG 245
Score = 42.8 bits (87), Expect(3) = 5e-054
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = -2 / -3
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACA 27
P + PYP APPI P AS PP*NVA A
Sbjct: 244 PVLYMFPYPHAPPIVPDASPPP*NVAWA 161
Score = 42.3 bits (86), Expect(2) = 9e-035
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = -1 / -3
Query: 171 PQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
P +PS NSAVLSAA+F PYP L P P
Sbjct: 304 PHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAP 209
Score = 28.1 bits (55), Expect(3) = 5e-054
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -1
Query: 140 CSAPRCSRRTPGC 102
CSAP CS RTP C
Sbjct: 273 CSAPPCSCRTPCC 235
>gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_A08_A002 5', mRNA sequence
Length = 787
Score = 240 bits (518), Expect(3) = 1e-084
Identities = 93/125 (74%), Positives = 105/125 (84%)
Frame = +2 / +2
Query: 269 PNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGF 448
P A P+ GGWCNPPRPHFD+A P FL IA+YRAGIVPV+YRRVPC K GG+RFTING
Sbjct: 407 PTTASPATTGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGH 586
Query: 449 RYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQALSFRVTASDR 628
YFNLVL+TNVAGAGDV S+K +STGW PMSRNWGQNWQSN++L GQ+LSF+VTASD
Sbjct: 587 SYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASDG 766
Query: 629 RTSTS 643
RT TS
Sbjct: 767 RTVTS 781
Score = 184 bits (396), Expect(3) = 6e-055
Identities = 81/124 (65%), Positives = 85/124 (68%)
Frame = -1 / -2
Query: 639 VEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTR 460
V VR SLAVT KE WP+R L CQFWPQF DMG HPVL L TSPAPAT V STR
Sbjct: 777 VTVRPSLAVTWKERLWPSRSELLCQFWPQFRDMGCHPVLEPLMETDCTSPAPATLVTSTR 598
Query: 459 LKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGS 280
LK PL+VNR PP HGT * TGTMPARY A+WR G A SKCGRGGLHQPP G
Sbjct: 597 LK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPVVAGE 418
Query: 279 A*LG 268
A +G
Sbjct: 417 AVVG 406
Score = 133 bits (286), Expect(3) = 3e-042
Identities = 59/80 (73%), Positives = 60/80 (75%)
Frame = -3 / -1
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
LA E+ V LPVLAPVPGHG PPGAG LD HVP AGHV QHQVEV AVD EP PA
Sbjct: 733 LAVEERVALPVLAPVPGHGLPPGAGALDGDGLHVPGAGHVGHQHQVEVGVAVDGEPDPAL 554
Query: 415 LAARHPAVGDGHDAGAVLGD 356
L ARHP VGDGHDAGAVL D
Sbjct: 553 LHARHPPVGDGHDAGAVLRD 494
Score = 58.3 bits (121), Expect(3) = 1e-084
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCE 196
S GYG N AALSTALF++G CG+C+E+RC+
Sbjct: 253 STGYGTNTAALSTALFNDGAACGSCYELRCD 345
Score = 56.1 bits (116), Expect(3) = 1e-084
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGN+ G
Sbjct: 178 AHATFYGGGDASGTMGGACGYGNMYSTG 261
Score = 53.3 bits (110), Expect(5) = 3e-031
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +3 / +3
Query: 399 GCRAASPAGCGSQSTASGTSTWC*SRTWPARGTWCARASR 518
GCRA AG GS STA+ TSTWC TWPA GT SR
Sbjct: 537 GCRA*RRAGSGSPSTATPTSTWCW*PTWPAPGTCSPSPSR 656
Score = 53.3 bits (110), Expect(5) = 3e-031
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +2 / +1
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRP 322
+I VTATNFCPPNY LPSDDG P P
Sbjct: 373 TITVTATNFCPPNYGLPSDDGRLVQPAAP 459
Score = 42.8 bits (87), Expect(3) = 6e-055
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = -2 / -3
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACA 27
P + PYP APPI P AS PP*NVA A
Sbjct: 260 PVLYMFPYPHAPPIVPDASPPP*NVAWA 177
Score = 42.3 bits (86), Expect(3) = 3e-042
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = -1 / -3
Query: 171 PQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
P +PS NSAVLSAA+F PYP L P P
Sbjct: 320 PHAAPSLNSAVLSAAVFVPYPVLYMFPYPHAP 225
Score = 40.0 bits (81), Expect(5) = 3e-031
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = +1 / +1
Query: 532 VAAHVQELGPELAVQRHPRRP 594
VAAHV ELGPELA Q PRRP
Sbjct: 670 VAAHVPELGPELAEQLAPRRP 732
Score = 35.9 bits (72), Expect(3) = 3e-042
Identities = 18/28 (64%), Positives = 18/28 (64%)
Frame = -1 / -3
Query: 321 GRGGLHQPPSSEGSA*LGGQKLVAVTRM 238
G G PSS G *LGGQKLVAVT M
Sbjct: 458 GAAGCTSRPSSLGRP*LGGQKLVAVTVM 375
Score = 33.6 bits (67), Expect(5) = 3e-031
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1 / +3
Query: 103 QPGVRREQRGAEHGAVRRGAPLRRVL 180
Q GVR E GAEHGAV+R +R +L
Sbjct: 252 QHGVRHEHGGAEHGAVQRRRGVRVLL 329
Score = 29.0 bits (57), Expect(5) = 3e-031
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3 / +3
Query: 27 RARHVLRRQRRFWLYGRGLRVRQPV 101
R RHVLRR+RR GR + VR+ V
Sbjct: 177 RPRHVLRRRRRVRHNGRRVWVREHV 251
Score = 28.1 bits (55), Expect(3) = 6e-055
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -1
Query: 140 CSAPRCSRRTPGC 102
CSAP CS RTP C
Sbjct: 289 CSAPPCSCRTPCC 251
>gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 3', mRNA sequence
Length = 725
Score = 306 bits (662), Expect = 4e-082
Identities = 118/155 (76%), Positives = 131/155 (84%)
Frame = +2 / +2
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
+I VTATNFCPPNY LPSDDGGWCNPPRPH D+A P FL IA+YRAGIVPV+YRRVPC K
Sbjct: 35 TITVTATNFCPPNYGLPSDDGGWCNPPRPHLDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 214
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GG+RFTING YFNLVL+TNVAGAGDV S+K +STGW PMSRNWGQNWQSN++L GQ
Sbjct: 215 KGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQ 394
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNF 700
+LSF+VTASD RT TS AP+ WQFGQTFEG F
Sbjct: 395 SLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQF 499
Score = 233 bits (503), Expect = 4e-060
Identities = 104/151 (68%), Positives = 107/151 (70%)
Frame = -1 / -3
Query: 690 PSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALT 511
PSKVWPNCQ GA V VR SLAVT KE WP+R L CQFWPQF DMG HPVL L
Sbjct: 489 PSKVWPNCQPAGATPLLVTVRPSLAVTWKERLWPSRSELLCQFWPQFRDMGCHPVLEPLM 310
Query: 510 LARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMAR 331
TSPAPAT V STRLK PL+VNR PP HGT * TGTMPARY A+WR G A
Sbjct: 309 ETDCTSPAPATLVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRKAGCAM 130
Query: 330 SKCGRGGLHQPPSSEGSA*LGGQKLVAVTRM 238
SKCGRGGLHQPPSS G *LGGQKLVAVT M
Sbjct: 129 SKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 37
Score = 133 bits (286), Expect = 3e-030
Identities = 59/80 (73%), Positives = 60/80 (75%)
Frame = -3 / -2
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
LA E+ V LPVLAPVPGHG PPGAG LD HVP AGHV QHQVEV AVD EP PA
Sbjct: 394 LAVEERVALPVLAPVPGHGLPPGAGALDGDGLHVPGAGHVGHQHQVEVGVAVDGEPDPAL 215
Query: 415 LAARHPAVGDGHDAGAVLGD 356
L ARHP VGDGHDAGAVL D
Sbjct: 214 LHARHPPVGDGHDAGAVLRD 155
>gb|CD231880.1|CD231880 SS1_30_D11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_30_D11_A012 5', mRNA sequence
Length = 691
Score = 219 bits (473), Expect(3) = 7e-078
Identities = 83/106 (78%), Positives = 91/106 (85%)
Frame = +2 / +2
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
+I VTATNFCPPNY LPSDDGGWCNPPRPHFD+A P FL IA+YRAGIVPV+YRRVPC K
Sbjct: 374 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 553
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRN 553
GG+RFTING Y NLVL+TNVAGAGDV S+K +STGW PMSRN
Sbjct: 554 KGGIRFTINGHSYINLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRN 691
Score = 158 bits (340), Expect(3) = 8e-047
Identities = 72/105 (68%), Positives = 74/105 (70%)
Frame = -1 / -2
Query: 552 FLDMGSHPVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMP 373
F DMG HPVL L TSPAPAT V STRL PL+VNR PP HGT * TGTMP
Sbjct: 690 FRDMGCHPVLEPLMETDCTSPAPATLVTSTRLM*EWPLMVNRIPPFFTHGTLL*ATGTMP 511
Query: 372 ARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRM 238
ARY A+WR G A SKCGRGGLHQPPSS G *LGGQKLVAVT M
Sbjct: 510 ARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 376
Score = 112 bits (239), Expect(2) = 2e-029
Identities = 48/66 (72%), Positives = 49/66 (74%)
Frame = -3 / -1
Query: 553 VPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAGLAARHPAVGDGHDA 374
VPGHG PPGAG LD HVP AGHV QHQV+V AVD EP PA L ARHP VGDGHDA
Sbjct: 691 VPGHGLPPGAGALDGDGLHVPGAGHVGHQHQVDVGVAVDGEPDPALLHARHPPVGDGHDA 512
Query: 373 GAVLGD 356
GAVL D
Sbjct: 511 GAVLRD 494
Score = 58.3 bits (121), Expect(3) = 7e-078
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCE 196
S GYG N AALSTALF++G CG+C+E+RC+
Sbjct: 254 STGYGTNTAALSTALFNDGAACGSCYELRCD 346
Score = 54.2 bits (112), Expect(3) = 7e-078
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = +1 / +2
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGG CGYGN+ G
Sbjct: 179 AHATFYGGGDASGTMGGVCGYGNMYSTG 262
Score = 41.4 bits (84), Expect(2) = 2e-029
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = -1 / -2
Query: 171 PQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
P +PS NSAVLSAA+F PYP L P P
Sbjct: 321 PHAAPSLNSAVLSAAVFVPYPVLYMFPYPHTP 226
Score = 40.9 bits (83), Expect(3) = 8e-047
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = -2 / -2
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACA 27
P + PYP PPI P AS PP*NVA A
Sbjct: 261 PVLYMFPYPHTPPIVPDASPPP*NVAWA 178
Score = 28.1 bits (55), Expect(3) = 8e-047
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -3
Query: 140 CSAPRCSRRTPGC 102
CSAP CS RTP C
Sbjct: 290 CSAPPCSCRTPCC 252
>gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_22_B08_A002 5', mRNA sequence
Length = 605
Score = 255 bits (551), Expect(2) = 2e-077
Identities = 96/124 (77%), Positives = 107/124 (86%)
Frame = +2 / +2
Query: 227 GRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVP 406
G +I VTATNFCPPNY LPSDDGGWCNPPRPHFD+A P FL IA+YRAGIVPV+YRRVP
Sbjct: 233 GYGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVP 412
Query: 407 CRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAIL 586
C K GG+RFTING YFNLVL+TNVAGAGDV S+K +STGW PMSRNWGQNWQSN++L
Sbjct: 413 CVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLL 592
Query: 587 VGQA 598
GQ+
Sbjct: 593 DGQS 604
Score = 192 bits (413), Expect(2) = 2e-054
Identities = 84/123 (68%), Positives = 87/123 (70%)
Frame = -1 / -3
Query: 594 WPTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPD 415
WP+R L CQFWPQF DMG HPVL L TSPAPAT V STRLK PL+VNR PP
Sbjct: 600 WPSRSELLCQFWPQFRDMGCHPVLEPLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPF 421
Query: 414 LRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRME 235
HGT * TGTMPARY A+WR G A SKCGRGGLHQPPSS G *LGGQKLVAVT M
Sbjct: 420 FTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMV 241
Query: 234 GLP 226
P
Sbjct: 240 PYP 232
Score = 130 bits (278), Expect(2) = 4e-032
Identities = 58/80 (72%), Positives = 59/80 (73%)
Frame = -3 / -2
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
LA E+ V LPVLAPVPGHG PPGAG LD HVP AGHV QHQVEV AVD EP PA
Sbjct: 601 LAVEERVALPVLAPVPGHGLPPGAGALDGDGLHVPGAGHVGHQHQVEVGVAVDGEPDPAL 422
Query: 415 LAARHPAVGDGHDAGAVLGD 356
L A HP VGDGHDAGAVL D
Sbjct: 421 LHAWHPPVGDGHDAGAVLRD 362
Score = 56.1 bits (116), Expect(2) = 2e-077
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +1 / +2
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGN+ G
Sbjct: 152 AHATFYGGGDASGTMGGACGYGNMYSTG 235
Score = 42.8 bits (87), Expect(2) = 2e-054
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = -2 / -3
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACA 27
P + PYP APPI P AS PP*NVA A
Sbjct: 234 PVLYMFPYPHAPPIVPDASPPP*NVAWA 151
Score = 32.2 bits (64), Expect(2) = 4e-032
Identities = 17/29 (58%), Positives = 17/29 (58%)
Frame = -1 / -2
Query: 111 PWLSQVAVPAGPAHKAKSVAAAVERGVRA 25
P V VP AH A VAAAVERGV A
Sbjct: 235 PRAVHVPVPTRAAHCAGRVAAAVERGVGA 149
>gb|CN124528.1|CN124528 RHOH1_5_H07.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_5_H07_A002 3', mRNA sequence
Length = 754
Score = 230 bits (496), Expect(4) = 8e-074
Identities = 88/150 (58%), Positives = 110/150 (73%)
Frame = +2 / +3
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
++ VTATN CP +Y+ PS+DGGWCNPPR HFD++ P + I Y GIVPV Y+RV C +
Sbjct: 183 TVTVTATNLCPADYSQPSNDGGWCNPPRQHFDMSQPSWEKIGVYSGGIVPVFYQRVSCSR 362
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
+GGVRFTING RYF LVLI NVAG G + +K +STGW+ MSRNWG NWQ+N+ L Q
Sbjct: 363 TGGVRFTINGNRYFKLVLIFNVAGPGSISAVQIKGSSTGWITMSRNWGANWQANSDLTRQ 542
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTF 685
++SFRVTA++ R +N A S WQ GQTF
Sbjct: 543 SISFRVTATNGRFLEFYNVAGSNWQLGQTF 632
Score = 124 bits (265), Expect(3) = 2e-034
Identities = 63/126 (50%), Positives = 72/126 (57%)
Frame = -1 / -1
Query: 621 LAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRLKYRKP 442
+AVTRKE R L CQ PQF DM HPV L P PAT +ST LKY P
Sbjct: 568 VAVTRKEMLCLVRSLLACQLAPQFRDMVIHPVDEPLICTALMDPGPATLKMSTSLKYLLP 389
Query: 441 LIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQ 262
L+V RTPP L T *+TGTMP + ++ + G SKC RGGLH PPS G * G
Sbjct: 388 LMVKRTPPVLEQDTLW*KTGTMPPL*TPIFSHDGWDMSKCCRGGLHHPPSLLGWE*SAGH 209
Query: 261 KLVAVT 244
+LVAVT
Sbjct: 208 RLVAVT 191
Score = 95.0 bits (201), Expect(2) = 4e-021
Identities = 44/80 (55%), Positives = 47/80 (58%)
Frame = -3 / -3
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
L E VGLPV APVPGHG PP LD PR G V D+H++EVP AVD E H AG
Sbjct: 542 LPGEVAVGLPVGAPVPGHGDPPRGRALDLHRADGPRPGDVEDEHELEVPVAVDGEAHAAG 363
Query: 415 LAARHPAVGDGHDAGAVLGD 356
A HP V D DA AV D
Sbjct: 362 PGAGHPLVEDRDDAAAVDAD 303
Score = 50.6 bits (104), Expect(4) = 8e-074
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQ 202
S GYG + AALS A+F+ G CG C++++C++Q
Sbjct: 57 SAGYGTDTAALSLAMFNGGAACGECYQVKCDQQ 155
Score = 38.6 bits (78), Expect(3) = 2e-034
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -1 / -1
Query: 216 HRHPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H C SH H+P +P N A LSAA+ PYP ++ P P
Sbjct: 169 HHRLFCWSHFTW*HSPHAAPPLNIAKLSAAVSVPYPAEYRLPYPHAP 29
Score = 33.6 bits (67), Expect(4) = 8e-074
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1 / +3
Query: 49 GSDAFGFMGGACGYGNL*QPG 111
G++A MGGACGYGNL G
Sbjct: 3 GANAADTMGGACGYGNLYSAG 65
Score = 30.9 bits (61), Expect(2) = 4e-021
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2 / -1
Query: 110 PGCHRLPYPQAPPIKPKASLP 48
P +RLPYP APPI A P
Sbjct: 64 PAEYRLPYPHAPPIVSAALAP 2
Score = 22.6 bits (43), Expect(4) = 8e-074
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2 / +3
Query: 197 EQPGWRWCRPG 229
+Q RWC+PG
Sbjct: 147 DQQNSRWCKPG 179
Score = 22.6 bits (43), Expect(3) = 2e-034
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -1 / -1
Query: 684 KVWPNCQV 661
KVWP+CQ+
Sbjct: 631 KVWPSCQL 608
>gb|BI245987.1|BI245987 IP1_66_C05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 548
Score = 240 bits (519), Expect(2) = 9e-074
Identities = 89/95 (93%), Positives = 92/95 (96%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGWRWCRPGRPSILVTATNFCPPNYAL 283
SQGYGVNNAALSTALF+EGL CGACFE++CE QPGWRWCRPG PSILVTATNFCPPNYAL
Sbjct: 263 SQGYGVNNAALSTALFNEGLSCGACFELKCENQPGWRWCRPGSPSILVTATNFCPPNYAL 442
Query: 284 PSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPV 388
PSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPV
Sbjct: 443 PSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPV 547
Score = 219 bits (473), Expect = 5e-056
Identities = 90/104 (86%), Positives = 92/104 (88%)
Frame = -1 / -3
Query: 387 TGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRMEGLPGRHHRH 208
TGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA* GGQKLVAVTRMEGLPGRHHRH
Sbjct: 546 TGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*FGGQKLVAVTRMEGLPGRHHRH 367
Query: 207 PGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
PG SHL SKHAPQ PS NSAVLSAALFTPYPWL ++ P P
Sbjct: 366 PGWFSHLSSKHAPQLRPSLNSAVLSAALFTPYPWLYRLP*PHAP 235
Score = 58.8 bits (122), Expect(2) = 9e-074
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +2
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGGSDA G MGGACGYGNL G
Sbjct: 188 AHATFYGGSDASGTMGGACGYGNLYSQG 271
>gb|CW214676.1|CW214676 104_646_11194139_148_37052_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194139, DNA
sequence
Length = 640
Score = 227 bits (490), Expect(4) = 2e-071
Identities = 87/149 (58%), Positives = 109/149 (73%)
Frame = +2 / +1
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
++ VTATN CP +Y+ PS+DGGWCNPPR HFD++ P + I Y GIVPV Y+RV C +
Sbjct: 193 TVTVTATNLCPADYSQPSNDGGWCNPPRQHFDMSQPSWEKIGVYSGGIVPVFYQRVSCSR 372
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
+GGVRFTING RYF LVLI NVAG G + +K +STGW+ MSRNWG NWQ+N+ L Q
Sbjct: 373 TGGVRFTINGNRYFKLVLIFNVAGPGSISAVQIKGSSTGWITMSRNWGANWQANSDLTRQ 552
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQT 682
++SFRVTA++ R +N A S WQ GQT
Sbjct: 553 SISFRVTATNGRFLEFYNVAGSNWQLGQT 639
Score = 124 bits (265), Expect(2) = 1e-033
Identities = 63/126 (50%), Positives = 72/126 (57%)
Frame = -1 / -3
Query: 621 LAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRLKYRKP 442
+AVTRKE R L CQ PQF DM HPV L P PAT +ST LKY P
Sbjct: 578 VAVTRKEMLCLVRSLLACQLAPQFRDMVIHPVDEPLICTALMDPGPATLKMSTSLKYLLP 399
Query: 441 LIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQ 262
L+V RTPP L T *+TGTMP + ++ + G SKC RGGLH PPS G * G
Sbjct: 398 LMVKRTPPVLEQDTLW*KTGTMPPL*TPIFSHDGWDMSKCCRGGLHHPPSLLGWE*SAGH 219
Query: 261 KLVAVT 244
+LVAVT
Sbjct: 218 RLVAVT 201
Score = 95.0 bits (201), Expect(2) = 1e-021
Identities = 44/80 (55%), Positives = 47/80 (58%)
Frame = -3 / -2
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
L E VGLPV APVPGHG PP LD PR G V D+H++EVP AVD E H AG
Sbjct: 552 LPGEVAVGLPVGAPVPGHGDPPRGRALDLHRADGPRPGDVEDEHELEVPVAVDGEAHAAG 373
Query: 415 LAARHPAVGDGHDAGAVLGD 356
A HP V D DA AV D
Sbjct: 372 PGAGHPLVEDRDDAAAVDAD 313
Score = 50.6 bits (104), Expect(4) = 2e-071
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQ 202
S GYG + AALS A+F+ G CG C++++C++Q
Sbjct: 67 SAGYGTDTAALSLAMFNGGAACGECYQVKCDQQ 165
Score = 40.9 bits (83), Expect(2) = 1e-033
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = -1 / -3
Query: 216 HRHPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGPAHKAKSVAAAV 43
H C SH H+P +P N A LSAA+ PYP ++ P P + + +AV
Sbjct: 179 HHRLFCWSHFTW*HSPHAAPPLNIAKLSAAVSVPYPAEYRLPYPHAPPVRRNASCSAV 6
Score = 32.2 bits (64), Expect(2) = 1e-021
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2 / -3
Query: 110 PGCHRLPYPQAPPIKPKAS 54
P +RLPYP APP++ AS
Sbjct: 74 PAEYRLPYPHAPPVRRNAS 18
Score = 28.1 bits (55), Expect(4) = 2e-071
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / +1
Query: 73 GGACGYGNL*QPG 111
GGACGYGNL G
Sbjct: 37 GGACGYGNLYSAG 75
Score = 22.6 bits (43), Expect(4) = 2e-071
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2 / +1
Query: 197 EQPGWRWCRPG 229
+Q RWC+PG
Sbjct: 157 DQQNSRWCKPG 189
>gb|CF429238.1|CF429238 PH1_20_C06.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_20_C06_A002 5', mRNA sequence
Length = 744
Score = 196 bits (422), Expect(4) = 3e-069
Identities = 73/123 (59%), Positives = 92/123 (74%)
Frame = +2 / +3
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
++ VTATN CP +Y+ PS+DGGWCNPPR HFD++ P + I Y GIVPV Y+RV C +
Sbjct: 375 TVTVTATNLCPADYSQPSNDGGWCNPPRQHFDMSQPSWEKIGVYSGGIVPVFYQRVSCSR 554
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
+GGVRFTING RYF LVLI NVAG G + +K +STGW+ MSRNWG NWQ+N+ L Q
Sbjct: 555 TGGVRFTINGNRYFKLVLIFNVAGPGSISAVQIKGSSTGWITMSRNWGANWQANSDLTRQ 734
Query: 596 ALS 604
++S
Sbjct: 735 SIS 743
Score = 114 bits (243), Expect(3) = 1e-032
Identities = 57/114 (50%), Positives = 65/114 (57%)
Frame = -1 / -3
Query: 585 RMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRH 406
R L CQ PQF DM HPV L P PAT +ST LKY PL+V RTPP L
Sbjct: 724 RSLLACQLAPQFRDMVIHPVDEPLICTALMDPGPATLKMSTSLKYLLPLMVKRTPPVLEQ 545
Query: 405 GTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVT 244
T *+TGTMP + ++ + G SKC RGGLH PPS G * G +LVAVT
Sbjct: 544 DTLW*KTGTMPPL*TPIFSHDGWDMSKCCRGGLHHPPSLLGWE*SAGHRLVAVT 383
Score = 95.0 bits (201), Expect(2) = 3e-025
Identities = 44/80 (55%), Positives = 47/80 (58%)
Frame = -3 / -2
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
L E VGLPV APVPGHG PP LD PR G V D+H++EVP AVD E H AG
Sbjct: 734 LPGEVAVGLPVGAPVPGHGDPPRGRALDLHRADGPRPGDVEDEHELEVPVAVDGEAHAAG 555
Query: 415 LAARHPAVGDGHDAGAVLGD 356
A HP V D DA AV D
Sbjct: 554 PGAGHPLVEDRDDAAAVDAD 495
Score = 51.9 bits (107), Expect(4) = 3e-069
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / +3
Query: 22 RRAHATFYGGSDAFGFMGGACGYGNL*QPG 111
+R ATFYGG++A G MGGACGYGNL G
Sbjct: 168 QRGSATFYGGANAAGTMGGACGYGNLYSAG 257
Score = 50.6 bits (104), Expect(4) = 3e-069
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQ 202
S GYG + AALS A+F+ G CG C++++C++Q
Sbjct: 249 SAGYGTDTAALSLAMFNGGAACGECYQVKCDQQ 347
Score = 44.6 bits (91), Expect(2) = 3e-025
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -2 / -3
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVA 33
P +RLPYP APPI P A PP*NVA
Sbjct: 256 PAEYRLPYPHAPPIVPAALAPP*NVA 179
Score = 38.6 bits (78), Expect(3) = 1e-032
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -1 / -3
Query: 216 HRHPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H C SH H+P +P N A LSAA+ PYP ++ P P
Sbjct: 361 HHRLFCWSHFTW*HSPHAAPPLNIAKLSAAVSVPYPAEYRLPYPHAP 221
Score = 26.7 bits (52), Expect(3) = 1e-032
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1 / -2
Query: 99 QVAVPAGPAHKAKSVAAAVER 37
QVA+PA H A V AVER
Sbjct: 245 QVAIPARATHCAGGVGPAVER 183
Score = 22.6 bits (43), Expect(4) = 3e-069
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2 / +3
Query: 197 EQPGWRWCRPG 229
+Q RWC+PG
Sbjct: 339 DQQNSRWCKPG 371
>gb|CW030261.1|CW030261 104_258_10500149_114_30403 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500149, DNA
sequence
Length = 688
Score = 250 bits (540), Expect(2) = 1e-068
Identities = 93/99 (93%), Positives = 96/99 (96%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGWRWCRPGRPSILVTATNFCPPNYAL 283
SQGYGVNNAALSTALF+EGL CGACFE++CE QPGWRWCRPG PSILVTATNFCPPNYAL
Sbjct: 98 SQGYGVNNAALSTALFNEGLSCGACFELKCENQPGWRWCRPGSPSILVTATNFCPPNYAL 277
Query: 284 PSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRR 400
PSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRR
Sbjct: 278 PSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRR 394
Score = 226 bits (489), Expect = 3e-058
Identities = 94/108 (87%), Positives = 96/108 (88%)
Frame = -1 / -2
Query: 399 RR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRMEGLPGR 220
RR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA* GGQKLVAVTRMEGLPGR
Sbjct: 393 RR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*FGGQKLVAVTRMEGLPGR 214
Query: 219 HHRHPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
HHRHPG SHL SKHAPQ PS NSAVLSAALFTPYPWL ++ P P
Sbjct: 213 HHRHPGWFSHLSSKHAPQLRPSLNSAVLSAALFTPYPWLYRLP*PHAP 70
Score = 31.8 bits (63), Expect(2) = 1e-068
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +1 / +2
Query: 58 AFGFMGGACGYGNL*QPG 111
A G GGACGYGNL G
Sbjct: 53 AVGLAGGACGYGNLYSQG 106
>gb|CD204043.1|CD204043 HS1_3_A10.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_3_A10_A012 5', mRNA sequence
Length = 632
Score = 185 bits (398), Expect(3) = 3e-068
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = +2 / +1
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
+I VTATNFCPPNY LPSDDGGWCNPPRPHFD+A P FL IA+YRAGIVPV+YRRVPC K
Sbjct: 379 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 558
Query: 416 SGGVRFTINGFRYFNLVLITNVAG 487
GG+RFTING YFNLVL+TNVAG
Sbjct: 559 KGGIRFTINGHSYFNLVLVTNVAG 630
Score = 136 bits (292), Expect(3) = 8e-041
Identities = 61/84 (72%), Positives = 63/84 (75%)
Frame = -1 / -1
Query: 489 APATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGG 310
APAT V STRLK PL+VNR PP HGT * TGTMPARY A+WR G A SKCGRGG
Sbjct: 632 APATLVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGG 453
Query: 309 LHQPPSSEGSA*LGGQKLVAVTRM 238
LHQPPSS G *LGGQKLVAVT M
Sbjct: 452 LHQPPSSLGRP*LGGQKLVAVTVM 381
Score = 58.3 bits (121), Expect(3) = 3e-068
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCE 196
S GYG N AALSTALF++G CG+C+E+RC+
Sbjct: 259 STGYGTNTAALSTALFNDGAACGSCYELRCD 351
Score = 56.1 bits (116), Expect(3) = 3e-068
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGN+ G
Sbjct: 184 AHATFYGGGDASGTMGGACGYGNMYSTG 267
Score = 42.8 bits (87), Expect(3) = 8e-041
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = -2 / -1
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACA 27
P + PYP APPI P AS PP*NVA A
Sbjct: 266 PVLYMFPYPHAPPIVPDASPPP*NVAWA 183
Score = 28.1 bits (55), Expect(3) = 8e-041
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -2
Query: 140 CSAPRCSRRTPGC 102
CSAP CS RTP C
Sbjct: 295 CSAPPCSCRTPCC 257
>gb|CW408701.1|CW408701 fsbb001f102l07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f102l07, DNA
sequence
Length = 685
Score = 172 bits (371), Expect(4) = 4e-065
Identities = 69/131 (52%), Positives = 88/131 (67%)
Frame = +2 / -1
Query: 293 DGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLI 472
+GGWC P RPHFD++ P + I + GI+PV Y++V C +SGGVRF I G YF LV I
Sbjct: 442 NGGWCGPGRPHFDMSQPSWEKIGVVQGGIIPVLYQQVKCSRSGGVRFNIAGSSYFLLVNI 263
Query: 473 TNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQALSFRVTASDRRTSTSWNA 652
N+ G+G V A VK +TGW+ MSRNWG NWQ+ + L GQALSF VT + + N
Sbjct: 262 QNLGGSGSVGAAWVKGTNTGWIQMSRNWGANWQALSGLTGQALSFAVTTTGGQYIQFLNV 83
Query: 653 APSTWQFGQTF 685
AP+ WQFGQT+
Sbjct: 82 APTWWQFGQTY 50
Score = 112 bits (239), Expect(3) = 6e-034
Identities = 55/129 (42%), Positives = 67/129 (51%)
Frame = -1 / +3
Query: 681 VWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLAR 502
V PNC +GA F+ + VT K SAWP CQ PQFLD+ HPVL LT A
Sbjct: 54 VCPNCHHVGATFRNCMYCPPVVVTAKLSAWPVSPERACQLAPQFLDIWIHPVLVPLTQAA 233
Query: 501 TTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKC 322
T P P F + T K +P ++ RTPP H T TG MP + ++ + G SKC
Sbjct: 234 PTEPLPPRFWMLTSRK*LEPAMLKRTPPLREHLTCWYSTGMMPPWTTPIFSHDGCDMSKC 413
Query: 321 GRGGLHQPP 295
GR G H PP
Sbjct: 414 GRPGPHHPP 440
Score = 52.8 bits (109), Expect(4) = 4e-065
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2 / -1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCE 196
S GYGVNNAALS LF++G CG C+ I C+
Sbjct: 625 SAGYGVNNAALSQTLFNDGASCGQCYTITCD 533
Score = 46.4 bits (95), Expect(3) = 6e-034
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = -1 / +3
Query: 195 SHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
SH++ H P +PS NS LSAAL TPYP L ++ P P
Sbjct: 534 SHVMV*HCPHDAPSLNSVWLSAALLTPYPALYRLPYPHAP 653
Score = 44.6 bits (91), Expect(4) = 4e-065
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = +1 / -1
Query: 43 YGGSDAFGFMGGACGYGNL*QPG 111
YGGSD G MGGACGYGNL G
Sbjct: 685 YGGSDGSGTMGGACGYGNLYSAG 617
Score = 37.3 bits (75), Expect(4) = 4e-065
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2 / -1
Query: 236 SILVTATNFCPPNYALPS 289
++ VTATN CPPNY LP+
Sbjct: 493 TVTVTATNLCPPNYGLPN 440
Score = 25.4 bits (49), Expect(3) = 6e-034
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / +3
Query: 285 GSA*LGGQKLVAVT 244
GS *LGG +LVAVT
Sbjct: 444 GSP*LGGHRLVAVT 485
>gb|CW231485.1|CW231485 104_680_11211147_116_37343_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11211147, DNA
sequence
Length = 736
Score = 243 bits (524), Expect(3) = 3e-064
Identities = 100/108 (92%), Positives = 102/108 (94%)
Frame = +2 / +2
Query: 386 VSYRRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQN 565
VS RVPCRKSGGVRFTINGFRYFNLVLITNVAGAGD+VRASVKA+STGWL MSRNWGQN
Sbjct: 89 VSRCRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKASSTGWLTMSRNWGQN 268
Query: 566 WQSNAILVGQALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNFRV* 709
WQSNAILVGQALSFRVT SDRRTSTSWNAAP WQFGQTFEGKNFRV*
Sbjct: 269 WQSNAILVGQALSFRVTGSDRRTSTSWNAAPRNWQFGQTFEGKNFRV* 412
Score = 232 bits (502), Expect(3) = 4e-063
Identities = 95/109 (87%), Positives = 99/109 (90%)
Frame = -1 / -2
Query: 711 HQTLKFLPSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSH 532
HQTLKFLPSKVWPNCQ+ GAAFQ+VEVRRSL VTRKESAWPTRMALDCQFWPQF DM SH
Sbjct: 414 HQTLKFLPSKVWPNCQLRGAAFQDVEVRRSLPVTRKESAWPTRMALDCQFWPQFRDMVSH 235
Query: 531 PVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ET 385
PVL A TLART SPAPATFVISTRLKYRKPL+VNRTPPD RHGT + ET
Sbjct: 234 PVLDAFTLARTMSPAPATFVISTRLKYRKPLMVNRTPPDFRHGTLQRET 88
Score = 141 bits (302), Expect = 2e-032
Identities = 59/67 (88%), Positives = 59/67 (88%)
Frame = -3 / -1
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
LADEDGVGLPVLAPVPGHGQPPGAGRL ARAH V RAGHVRDQHQVEVPEAVD EPH A
Sbjct: 298 LADEDGVGLPVLAPVPGHGQPPGAGRLHARAHDVTRAGHVRDQHQVEVPEAVDGEPHAA* 119
Query: 415 LAARHPA 395
L A HPA
Sbjct: 118 LPAWHPA 98
Score = 78.5 bits (165), Expect(3) = 3e-029
Identities = 32/40 (80%), Positives = 32/40 (80%)
Frame = +3 / +3
Query: 399 GCRAASPAGCGSQSTASGTSTWC*SRTWPARGTWCARASR 518
GC A S A CGS STASGTSTWC*SRTWPAR T CARA R
Sbjct: 102 GCHAGSQAACGSPSTASGTSTWC*SRTWPARVTSCARA*R 221
Score = 52.4 bits (108), Expect(3) = 3e-029
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +1 / +1
Query: 532 VAAHVQELGPELAVQRHPRRPGA 600
VA HV ELGPELAVQRHPRRPGA
Sbjct: 235 VADHVPELGPELAVQRHPRRPGA 303
Score = 37.3 bits (75), Expect(3) = 3e-029
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1 / +1
Query: 667 AVRPDLRGQELQGLM 711
AVRPDLRGQELQGLM
Sbjct: 370 AVRPDLRGQELQGLM 414
Score = 29.5 bits (58), Expect(3) = 4e-063
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -3
Query: 982 PIHTSCSEEKTPFFQR 935
P CSE KTPFFQR
Sbjct: 641 PFCPPCSEAKTPFFQR 594
Score = 24.4 bits (47), Expect(3) = 4e-063
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2 / -1
Query: 1025 GPKRRQYTLTNSRESH 978
GP R+QYTLT+ H
Sbjct: 673 GPARQQYTLTDPFAPH 626
Score = 24.0 bits (46), Expect(3) = 3e-064
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1 / +3
Query: 979 WDSLEFVRVYCRLFGP 1026
W + VRVYC L GP
Sbjct: 627 WGAKGSVRVYCCLAGP 674
Score = 23.5 bits (45), Expect(3) = 3e-064
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1 / +2
Query: 892 *GHAFRPP*SQVQVLSEKMESFLLNKMCG 978
*GH P* VQ S + + FLL M G
Sbjct: 548 *GHHVFSP*FDVQAKSSEKKEFLLLNMGG 634
>gb|CW348698.1|CW348698 fsbb001f009c21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f009c21, DNA
sequence
Length = 689
Score = 146 bits (313), Expect(5) = 2e-061
Identities = 55/91 (60%), Positives = 67/91 (73%)
Frame = +2 / +2
Query: 296 GGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLIT 475
GGWC PPRPHFD++ P + +I Y AG++ V Y+RV C KSGGVRFTI GF F +VLIT
Sbjct: 296 GGWCAPPRPHFDMSQPAWENIGIYSAGVINVLYQRVKCWKSGGVRFTIAGFNGFYMVLIT 475
Query: 476 NVAGAGDVVRASVKAASTGWLPMSRNWGQNW 568
NVAG+G + +VK ST W+PM RNWG NW
Sbjct: 476 NVAGSGSIQSMAVKGNSTDWIPMYRNWGANW 568
Score = 87.7 bits (185), Expect(3) = 3e-026
Identities = 45/93 (48%), Positives = 50/93 (53%)
Frame = -1 / -3
Query: 570 CQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR* 391
CQ PQFL MG VL T P PAT V+ST K KP +V RTPP +H TR *
Sbjct: 570 CQLAPQFLYMGIQSVLLPFTAML*MEPLPATLVMSTM*KPLKPAMVKRTPPLFQHLTRW* 391
Query: 390 ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPS 292
T PA M+ G SK GRGG HQPP+
Sbjct: 390 RTLMTPAL*MPMFSQAGWDMSKWGRGGAHQPPA 292
Score = 56.5 bits (117), Expect(5) = 2e-061
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +2 / +2
Query: 107 QGYGVNNAALSTALFDEGLRCGACFEIRCE 196
QGYG+NNAALSTALF++G CG C+ I C+
Sbjct: 98 QGYGINNAALSTALFNDGASCGQCYVIICD 187
Score = 49.6 bits (102), Expect(5) = 2e-061
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +2 / +2
Query: 212 RWCRPGRPSILVTATNFCPPNYALPS 289
+WC+PG ++V+ATNFCPPN+ LP+
Sbjct: 200 QWCKPGNNWVVVSATNFCPPNWDLPA 277
Score = 36.8 bits (74), Expect(5) = 2e-061
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2 / +2
Query: 584 LVGQALSFRVTASDRRTSTSWNAAPSTWQFGQTF 685
LVGQ LSF + ++ + + P+ WQFGQT+
Sbjct: 587 LVGQGLSFALVSTGGQNLVFKDVVPAWWQFGQTY 688
Score = 35.4 bits (71), Expect(3) = 3e-026
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -1 / -3
Query: 195 SHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
S +++ H P +PS SAVLSAAL P P + P P
Sbjct: 186 SQMMT*HCPHDAPSLKSAVLSAALLMP*PCSYRSLYPHAP 67
Score = 35.0 bits (70), Expect(3) = 3e-026
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -1 / -3
Query: 285 GSA*LGGQKLVAVTRMEGLPGRHH 214
G + LGGQKLVA T + LPG HH
Sbjct: 273 GRSQLGGQKLVAETTTQLLPGLHH 202
Score = 24.0 bits (46), Expect(5) = 2e-061
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1 / +2
Query: 73 GGACGYGNL*QPG 111
GGACGY +L + G
Sbjct: 65 GGACGYSDLYEQG 103
>gb|CN127175.1|CN127175 RHOH1_21_B02.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_B02_A002 5', mRNA sequence
Length = 816
Score = 166 bits (356), Expect(4) = 2e-061
Identities = 65/122 (53%), Positives = 83/122 (68%)
Frame = +2 / +3
Query: 293 DGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLI 472
+GGWC P RPHFD++ P + HI Y AG+VPV Y++V C ++GGVRF++ G +YF LV I
Sbjct: 447 NGGWCGPGRPHFDMSQPAWEHIGIYSAGVVPVLYQQVKCSRTGGVRFSLAGSQYFLLVNI 626
Query: 473 TNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQALSFRVTASDRRTSTSWNA 652
N+ G+G V A VK TGW+ MSRNWG NWQ+ A LVGQ LSF VT + + WN
Sbjct: 627 QNLGGSGSVGAAWVKGDKTGWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNV 806
Query: 653 AP 658
P
Sbjct: 807 VP 812
Score = 101 bits (216), Expect(4) = 2e-032
Identities = 53/121 (43%), Positives = 60/121 (49%)
Frame = -1 / -3
Query: 657 GAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPAT 478
G FQ + VT K S WPT A CQ PQFLD+ HPVL+ T A T P P
Sbjct: 811 GTTFQN*MYCPPVVVTAKLSPWPTSPASACQLAPQFLDIWIHPVLSPFTHAAPTEPLPPR 632
Query: 477 FVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQP 298
F + T KY +P + RTPP H T TGT PA M + G SK GR G H P
Sbjct: 631 FWMLTSRKYWEPARLKRTPPVREHLTCWYRTGTTPAL*MPMCSHAGCDMSKWGRPGPHHP 452
Query: 297 P 295
P
Sbjct: 451 P 449
Score = 48.7 bits (100), Expect(4) = 2e-061
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2 / +3
Query: 110 GYGVNNAALSTALFDEGLRCGACFEIRCE 196
GYGVNNAAL LF++G CG C+ I C+
Sbjct: 270 GYGVNNAALGPTLFNDGASCGQCYLITCD 356
Score = 47.3 bits (97), Expect(4) = 2e-061
Identities = 19/26 (73%), Positives = 19/26 (73%)
Frame = +1 / +3
Query: 34 ATFYGGSDAFGFMGGACGYGNL*QPG 111
ATFYGG DA G MGGACGY NL G
Sbjct: 195 ATFYGGVDASGTMGGACGYDNLYNAG 272
Score = 42.3 bits (86), Expect(4) = 2e-032
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -2 / -3
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVA 33
P +RL YP APPI P AS PP* VA
Sbjct: 271 PALYRLSYPHAPPIVPDASTPP*KVA 194
Score = 33.1 bits (66), Expect(4) = 2e-061
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2 / +3
Query: 236 SILVTATNFCPPNYALPS 289
S V+ATN CP NYALP+
Sbjct: 396 STTVSATNLCPSNYALPN 449
Score = 29.5 bits (58), Expect(4) = 2e-032
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -1
Query: 134 APRCSRRTPGC 102
APRCSRRTP C
Sbjct: 294 APRCSRRTPRC 262
Score = 22.6 bits (43), Expect(4) = 2e-032
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1 / -3
Query: 285 GSA*LGGQKLVAVTRME 235
GSA*L G +LVA T +E
Sbjct: 445 GSA*LDGHRLVADTVVE 395
>gb|CW083024.1|CW083024 104_425_10944087_114_32388_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944087, DNA
sequence
Length = 711
Score = 178 bits (383), Expect(4) = 6e-060
Identities = 70/131 (53%), Positives = 88/131 (67%)
Frame = +2 / -2
Query: 293 DGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLI 472
+GGWC P RPHFD++ P + I Y AG++PV Y++V C ++GGVRF I G +YF LV I
Sbjct: 512 NGGWCGPGRPHFDMSQPAWERIGIYSAGVIPVLYQQVKCSRTGGVRFGIAGSQYFLLVNI 333
Query: 473 TNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQALSFRVTASDRRTSTSWNA 652
N+ G+G V A VK TGW+ MSRNWG NWQ+ A LVGQ LSF VT + + WN
Sbjct: 332 QNLGGSGSVGAAWVKGDRTGWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNV 153
Query: 653 APSTWQFGQTF 685
P WQFGQT+
Sbjct: 152 VPRWWQFGQTY 120
Score = 111 bits (236), Expect(3) = 3e-032
Identities = 57/129 (44%), Positives = 64/129 (49%)
Frame = -1 / +1
Query: 681 VWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLAR 502
V PNC LG FQ + VT K S WPT A CQ PQFLD+ HPVL+ T A
Sbjct: 124 VCPNCHHLGTTFQN*MYCPPVVVTAKLSPWPTSPASACQLAPQFLDIWIHPVLSPFTQAA 303
Query: 501 TTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKC 322
T P P F + T KY +P + RTPP H T TG PA M + G SK
Sbjct: 304 PTEPLPPRFWMLTSRKYWEPAMPKRTPPVREHLTCWYRTGMTPAL*MPMRSHAGCDMSKW 483
Query: 321 GRGGLHQPP 295
GR G H PP
Sbjct: 484 GRPGPHHPP 510
Score = 51.5 bits (106), Expect(4) = 6e-060
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +2 / -2
Query: 110 GYGVNNAALSTALFDEGLRCGACFEIRCE 196
GYGVNNAALS+ LF++G CG C+ I C+
Sbjct: 689 GYGVNNAALSSTLFNDGASCGQCYLITCD 603
Score = 42.8 bits (87), Expect(3) = 3e-032
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -1 / +1
Query: 198 SSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVA 91
+S ++ H P +PS NS LSAALFTPYP L +++
Sbjct: 601 ASQVMR*HCPHDAPSLNSVELSAALFTPYPALYRLS 708
Score = 35.4 bits (71), Expect(4) = 6e-060
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / -2
Query: 236 SILVTATNFCPPNYALPS 289
SI V+ATN CP NYALP+
Sbjct: 563 SITVSATNLCPANYALPN 510
Score = 24.9 bits (48), Expect(3) = 3e-032
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1 / +1
Query: 285 GSA*LGGQKLVAVTRME 235
GSA*L G +LVA T ME
Sbjct: 514 GSA*LAGHRLVADTVME 564
Score = 24.9 bits (48), Expect(4) = 6e-060
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2 / -2
Query: 200 QPGWRWCRPG 229
+PG +WC+PG
Sbjct: 596 RPGGQWCKPG 567
>gb|CW083023.1|CW083023 104_425_10944087_114_32352_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944087, DNA
sequence
Length = 704
Score = 178 bits (383), Expect(4) = 6e-060
Identities = 70/131 (53%), Positives = 88/131 (67%)
Frame = +2 / -1
Query: 293 DGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLI 472
+GGWC P RPHFD++ P + I Y AG++PV Y++V C ++GGVRF I G +YF LV I
Sbjct: 512 NGGWCGPGRPHFDMSQPAWERIGIYSAGVIPVLYQQVKCSRTGGVRFGIAGSQYFLLVNI 333
Query: 473 TNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQALSFRVTASDRRTSTSWNA 652
N+ G+G V A VK TGW+ MSRNWG NWQ+ A LVGQ LSF VT + + WN
Sbjct: 332 QNLGGSGSVGAAWVKGDRTGWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNV 153
Query: 653 APSTWQFGQTF 685
P WQFGQT+
Sbjct: 152 VPRWWQFGQTY 120
Score = 111 bits (236), Expect(3) = 3e-032
Identities = 57/129 (44%), Positives = 64/129 (49%)
Frame = -1 / +1
Query: 681 VWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLAR 502
V PNC LG FQ + VT K S WPT A CQ PQFLD+ HPVL+ T A
Sbjct: 124 VCPNCHHLGTTFQN*MYCPPVVVTAKLSPWPTSPASACQLAPQFLDIWIHPVLSPFTQAA 303
Query: 501 TTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKC 322
T P P F + T KY +P + RTPP H T TG PA M + G SK
Sbjct: 304 PTEPLPPRFWMLTSRKYWEPAMPKRTPPVREHLTCWYRTGMTPAL*MPMRSHAGCDMSKW 483
Query: 321 GRGGLHQPP 295
GR G H PP
Sbjct: 484 GRPGPHHPP 510
Score = 51.5 bits (106), Expect(4) = 6e-060
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +2 / -1
Query: 110 GYGVNNAALSTALFDEGLRCGACFEIRCE 196
GYGVNNAALS+ LF++G CG C+ I C+
Sbjct: 689 GYGVNNAALSSTLFNDGASCGQCYLITCD 603
Score = 42.3 bits (86), Expect(3) = 3e-032
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -1 / +1
Query: 198 SSHLISKHAPQRSPSSNSAVLSAALFTPYPWL 103
+S ++ H P +PS NS LSAALFTPYP L
Sbjct: 601 ASQVMR*HCPHDAPSLNSVELSAALFTPYPAL 696
Score = 35.4 bits (71), Expect(4) = 6e-060
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / -1
Query: 236 SILVTATNFCPPNYALPS 289
SI V+ATN CP NYALP+
Sbjct: 563 SITVSATNLCPANYALPN 510
Score = 24.9 bits (48), Expect(3) = 3e-032
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1 / +1
Query: 285 GSA*LGGQKLVAVTRME 235
GSA*L G +LVA T ME
Sbjct: 514 GSA*LAGHRLVADTVME 564
Score = 24.9 bits (48), Expect(4) = 6e-060
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2 / -1
Query: 200 QPGWRWCRPG 229
+PG +WC+PG
Sbjct: 596 RPGGQWCKPG 567
>gb|CW348697.1|CW348697 fsbb001f009c21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f009c21, DNA
sequence
Length = 694
Score = 146 bits (313), Expect(4) = 1e-059
Identities = 55/91 (60%), Positives = 67/91 (73%)
Frame = +2 / -2
Query: 296 GGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLIT 475
GGWC PPRPHFD++ P + +I Y AG++ V Y+RV C KSGGVRFTI GF F +VLIT
Sbjct: 495 GGWCAPPRPHFDMSQPAWENIGIYSAGVINVLYQRVKCWKSGGVRFTIAGFNGFYMVLIT 316
Query: 476 NVAGAGDVVRASVKAASTGWLPMSRNWGQNW 568
NVAG+G + +VK ST W+PM RNWG NW
Sbjct: 315 NVAGSGSIQSMAVKGNSTDWIPMYRNWGANW 223
Score = 87.7 bits (185), Expect(3) = 7e-026
Identities = 45/93 (48%), Positives = 50/93 (53%)
Frame = -1 / +2
Query: 570 CQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR* 391
CQ PQFL MG VL T P PAT V+ST K KP +V RTPP +H TR *
Sbjct: 221 CQLAPQFLYMGIQSVLLPFTAML*MEPLPATLVMSTM*KPLKPAMVKRTPPLFQHLTRW* 400
Query: 390 ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPS 292
T PA M+ G SK GRGG HQPP+
Sbjct: 401 RTLMTPAL*MPMFSQAGWDMSKWGRGGAHQPPA 499
Score = 56.5 bits (117), Expect(4) = 1e-059
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +2 / -2
Query: 107 QGYGVNNAALSTALFDEGLRCGACFEIRCE 196
QGYG+NNAALSTALF++G CG C+ I C+
Sbjct: 693 QGYGINNAALSTALFNDGASCGQCYVIICD 604
Score = 49.6 bits (102), Expect(4) = 1e-059
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +2 / -2
Query: 212 RWCRPGRPSILVTATNFCPPNYALPS 289
+WC+PG ++V+ATNFCPPN+ LP+
Sbjct: 591 QWCKPGNNWVVVSATNFCPPNWDLPA 514
Score = 36.8 bits (74), Expect(4) = 1e-059
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2 / -2
Query: 584 LVGQALSFRVTASDRRTSTSWNAAPSTWQFGQTF 685
LVGQ LSF + ++ + + P+ WQFGQT+
Sbjct: 204 LVGQGLSFALVSTGGQNLVFKDVVPAWWQFGQTY 103
Score = 35.0 bits (70), Expect(3) = 7e-026
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -1 / +2
Query: 285 GSA*LGGQKLVAVTRMEGLPGRHH 214
G + LGGQKLVA T + LPG HH
Sbjct: 518 GRSQLGGQKLVAETTTQLLPGLHH 589
Score = 34.1 bits (68), Expect(3) = 7e-026
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1 / +2
Query: 195 SHLISKHAPQRSPSSNSAVLSAALFTPYP 109
S +++ H P +PS SAVLSAAL P P
Sbjct: 605 SQMMT*HCPHDAPSLKSAVLSAALLMP*P 691
>gb|CW159464.1|CW159464 104_565_11149372_116_36410_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149372, DNA
sequence
Length = 679
Score = 171 bits (367), Expect(4) = 4e-059
Identities = 69/131 (52%), Positives = 87/131 (66%)
Frame = +2 / -2
Query: 293 DGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLI 472
+GGWC P RPHFD++ P + HI +AGI+PV Y++V C ++GGVRF+I G +YF LV I
Sbjct: 408 NGGWCGPGRPHFDMSQPAWEHIGVVQAGIIPVLYQQVRCTRTGGVRFSIAGSQYFLLVNI 229
Query: 473 TNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQALSFRVTASDRRTSTSWNA 652
NV G+G V A VK TGW+ MSRNWG NWQ+ + LVGQ LSF VT + +
Sbjct: 228 QNVGGSGAVGAAWVKGDKTGWIQMSRNWGANWQALSGLVGQGLSFAVTTTGGQYLQFMYV 49
Query: 653 APSTWQFGQTF 685
P WQFG TF
Sbjct: 48 VPGWWQFGMTF 16
Score = 119 bits (255), Expect(3) = 5e-035
Identities = 58/133 (43%), Positives = 69/133 (51%)
Frame = -1 / +2
Query: 693 LPSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAAL 514
L KV PNC G + + VT K S WPT CQ PQFLD+ HPVL+
Sbjct: 8 LVPKVMPNCHHPGTTYMNCRYCPPVVVTAKLSPWPTSPDSACQLAPQFLDIWIHPVLSPF 187
Query: 513 TLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMA 334
T A T+P P TF + T KY +P ++ RTPP H T TG MPA + M + G
Sbjct: 188 TQAAPTAPLPPTFWMLTSRKYWEPAMLKRTPPVRVHLTCWYRTGMMPACTTPMCSHAGCD 367
Query: 333 RSKCGRGGLHQPP 295
SKCGR G H PP
Sbjct: 368 MSKCGRPGPHHPP 406
Score = 49.2 bits (101), Expect(4) = 4e-059
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2 / -2
Query: 110 GYGVNNAALSTALFDEGLRCGACFEIRCE 196
GYG+NNAALS LF+ G CG C+ I C+
Sbjct: 585 GYGINNAALSQTLFNNGASCGQCYLITCD 499
Score = 42.8 bits (87), Expect(3) = 5e-035
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = -1 / +2
Query: 195 SHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
SH+I H P +P NS LSAAL PYP L ++ P P
Sbjct: 500 SHVIR*HCPHDAPLLNSVWLSAALLMPYPALYRLPYPHAP 619
Score = 37.3 bits (75), Expect(4) = 4e-059
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / -2
Query: 236 SILVTATNFCPPNYALPS 289
SI V+ATN CPPNY LP+
Sbjct: 459 SITVSATNLCPPNYGLPN 406
Score = 29.9 bits (59), Expect(4) = 4e-059
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / -2
Query: 67 FMGGACGYGNL*QPG 111
++GGACGYGNL G
Sbjct: 627 YVGGACGYGNLYNAG 583
Score = 25.4 bits (49), Expect(3) = 5e-035
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1 / +2
Query: 285 GSA*LGGQKLVAVTRME 235
GS *LGG +LVA T ME
Sbjct: 410 GSP*LGGHRLVADTVME 460
>gb|CW246309.1|CW246309 104_707_11221289_116_35084_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221289, DNA
sequence
Length = 616
Score = 163 bits (351), Expect(4) = 3e-058
Identities = 62/108 (57%), Positives = 79/108 (73%)
Frame = +2 / +1
Query: 206 GWRWCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVP 385
G WC G PSI VTATN CPPN+A +++GGWCNPPR HFDL+ P F+ +A++RAGIVP
Sbjct: 169 GSPWCYAGSPSITVTATNLCPPNWAQDTNNGGWCNPPRTHFDLSKPAFMKMAQWRAGIVP 348
Query: 386 VSYRRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAAST 529
V YRRVPC + GG+RF + G Y+ L + NV GAGDVV VK+ ++
Sbjct: 349 VMYRRVPCVRRGGLRFALQGNPYWLLAYVMNVGGAGDVVEMWVKSGTS 492
Score = 104 bits (222), Expect(2) = 1e-028
Identities = 49/99 (49%), Positives = 59/99 (59%)
Frame = -1 / -3
Query: 501 TTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKC 322
TTSPAP TF+ + P NR PP GTRR TGT+PAR+ A++ G+ RSK
Sbjct: 464 TTSPAPPTFITYASSQ*GFPWSANRRPPLRTQGTRRYMTGTIPARHCAIFMKAGLERSKW 285
Query: 321 GRGGLHQPPSSEGSA*LGGQKLVAVTRMEGLPGRHHRHP 205
RGGLH PP A LGG +LVAVT ++G P HH P
Sbjct: 284 VRGGLHHPPLLVSCAQLGGHRLVAVTVIDGEPA*HHGEP 168
Score = 50.6 bits (104), Expect(4) = 3e-058
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +2 / +1
Query: 110 GYGVNNAALSTALFDEGLRCGACFEIRCEEQP 205
GYG + AALST LF +G CG C++IRC P
Sbjct: 82 GYGTDTAALSTTLFKDGHGCGTCYQIRCTGSP 177
Score = 44.1 bits (90), Expect(2) = 1e-028
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = -1 / -3
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G H I H PQ PS NS VLSAA+ PYP ++ P P
Sbjct: 182 HHGEPVHRIW*HVPQPCPSLNSVVLSAAVSVPYPVAYRLPYPHAP 48
Score = 42.3 bits (86), Expect(4) = 3e-058
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2 / +1
Query: 521 ASTGWLPMSRNWGQNWQSNAILVGQALSFRVTASDRR 631
+S W+ M+ NWG +Q+ A L G+ALSF+VT+ R
Sbjct: 490 SSCAWIRMTHNWGAAYQAFAQLGGKALSFKVTSYTTR 600
Score = 27.6 bits (54), Expect(4) = 3e-058
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +1
Query: 73 GGACGYGNL 99
GGACGYGNL
Sbjct: 46 GGACGYGNL 72
>gb|BI075831.1|BI075831 IP1_21_G05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 646
Score = 179 bits (386), Expect(2) = 4e-058
Identities = 66/81 (81%), Positives = 73/81 (90%)
Frame = +2 / +3
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
+I VTATNFCPPNY LPSDDGGWCNPPRPHFD+A P FLHIA+YRAGIVPV++RRVPC K
Sbjct: 402 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVAFRRVPCVK 581
Query: 416 SGGVRFTINGFRYFNLVLITN 478
GG+RFTING YFNLVL+TN
Sbjct: 582 KGGIRFTINGHSYFNLVLVTN 644
Score = 129 bits (276), Expect(2) = 8e-040
Identities = 58/81 (71%), Positives = 59/81 (72%)
Frame = -1 / -1
Query: 480 TFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQ 301
T V STRLK PL+VNR PP HGT TGTMPARY AMWR G A SKCGRGGLHQ
Sbjct: 646 TLVTSTRLK*ECPLMVNRMPPFFTHGTLLKATGTMPARYCAMWRKAGSAMSKCGRGGLHQ 467
Query: 300 PPSSEGSA*LGGQKLVAVTRM 238
PPSS G *LGGQKLVAVT M
Sbjct: 466 PPSSLGRP*LGGQKLVAVTVM 404
Score = 67.5 bits (141), Expect(2) = 4e-058
Identities = 29/51 (56%), Positives = 32/51 (62%)
Frame = +1 / +2
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPGVRREQRGAEHGAVRRGAPLRRVL 180
AHATFYGG DA G MGGACGYGNL G HGAV+R +R +L
Sbjct: 206 AHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALXHGAVQRRRGVRVLL 358
Score = 56.5 bits (117), Expect(2) = 8e-040
Identities = 31/57 (54%), Positives = 32/57 (56%)
Frame = -1 / -1
Query: 195 SHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGPAHKAKSVAAAVERGVRA 25
SH S P +PS NSAV P QVAVPA AH A VAAAVERGVRA
Sbjct: 373 SHRSS*QDPHAAPSLNSAVXQRRRVRAVPGAVQVAVPARAAHCAGRVAAAVERGVRA 203
>gb|CN144206.1|CN144206 WOUND1_20_G04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_20_G04_A002 5', mRNA sequence
Length = 607
Score = 152 bits (326), Expect(3) = 4e-058
Identities = 55/68 (80%), Positives = 62/68 (91%)
Frame = +2 / +1
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
+I VTATNFCPPNY LPSD+GGWCNPPRPHFD+A P FLHIA+YRAGIVPV++RRVPC K
Sbjct: 403 TITVTATNFCPPNYGLPSDNGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVAFRRVPCVK 582
Query: 416 SGGVRFTI 439
GG+RFTI
Sbjct: 583 KGGIRFTI 606
Score = 110 bits (235), Expect(3) = 9e-035
Identities = 48/67 (71%), Positives = 49/67 (73%)
Frame = -1 / -3
Query: 438 IVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQK 259
+VNR PP HGT TGTMPARY AMWR G A SKCGRGGLHQPP S G *LGGQK
Sbjct: 605 MVNRMPPFFTHGTLLKATGTMPARYCAMWRKAGSAMSKCGRGGLHQPPLSLGRP*LGGQK 426
Query: 258 LVAVTRM 238
LVAVT M
Sbjct: 425 LVAVTVM 405
Score = 57.0 bits (118), Expect(3) = 4e-058
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGNL G
Sbjct: 208 AHATFYGGGDASGTMGGACGYGNLYSTG 291
Score = 56.5 bits (117), Expect(3) = 4e-058
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCE 196
S GYG N AALSTALF++G CG+C+++RC+
Sbjct: 283 STGYGTNTAALSTALFNDGAACGSCYKLRCD 375
Score = 52.4 bits (108), Expect(3) = 9e-035
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = -2 / -3
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACA 27
P +RLPYP APPI P AS PP*NVACA
Sbjct: 290 PVLYRLPYPHAPPIVPDASPPP*NVACA 207
Score = 24.0 bits (46), Expect(3) = 9e-035
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2 / -1
Query: 140 CSAPRCSRRTPGC 102
CSAP CS RT C
Sbjct: 319 CSAPPCSCRTRCC 281
>gb|CW210014.1|CW210014 104_640_11189567_148_36998_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11189567, DNA
sequence
Length = 675
Score = 172 bits (371), Expect(3) = 2e-056
Identities = 69/131 (52%), Positives = 88/131 (67%)
Frame = +2 / -3
Query: 293 DGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLI 472
+GGWC P RPHFD++ P + I + GI+PV Y++V C +SGGVRF I G YF LV I
Sbjct: 490 NGGWCGPGRPHFDMSQPSWEKIGVVQGGIIPVLYQQVKCSRSGGVRFNIAGSSYFLLVNI 311
Query: 473 TNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQALSFRVTASDRRTSTSWNA 652
N+ G+G V A VK +TGW+ MSRNWG NWQ+ + L GQALSF VT + + N
Sbjct: 310 QNLGGSGSVGAAWVKGTNTGWIQMSRNWGANWQALSGLTGQALSFAVTTTGGQYIQFLNV 131
Query: 653 APSTWQFGQTF 685
AP+ WQFGQT+
Sbjct: 130 APTWWQFGQTY 98
Score = 112 bits (239), Expect(3) = 6e-032
Identities = 55/129 (42%), Positives = 67/129 (51%)
Frame = -1 / +3
Query: 681 VWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLAR 502
V PNC +GA F+ + VT K SAWP CQ PQFLD+ HPVL LT A
Sbjct: 102 VCPNCHHVGATFRNCMYCPPVVVTAKLSAWPVSPERACQLAPQFLDIWIHPVLVPLTQAA 281
Query: 501 TTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKC 322
T P P F + T K +P ++ RTPP H T TG MP + ++ + G SKC
Sbjct: 282 PTEPLPPRFWMLTSRK*LEPAMLKRTPPLREHLTCWYSTGMMPPWTTPIFSHDGCDMSKC 461
Query: 321 GRGGLHQPP 295
GR G H PP
Sbjct: 462 GRPGPHHPP 488
Score = 50.1 bits (103), Expect(3) = 2e-056
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +2 / -3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCE 196
S GYGV NAALS LF++G CG C+ I C+
Sbjct: 673 SAGYGVTNAALSQTLFNDGASCGQCYTITCD 581
Score = 39.6 bits (80), Expect(3) = 6e-032
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -1 / +3
Query: 195 SHLISKHAPQRSPSSNSAVLSAALFTPYPWL 103
SH++ H P +PS NS LSAA TPYP L
Sbjct: 582 SHVMV*HCPHDAPSLNSVWLSAAFVTPYPAL 674
Score = 37.3 bits (75), Expect(3) = 2e-056
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2 / -3
Query: 236 SILVTATNFCPPNYALPS 289
++ VTATN CPPNY LP+
Sbjct: 541 TVTVTATNLCPPNYGLPN 488
Score = 25.4 bits (49), Expect(3) = 6e-032
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / +3
Query: 285 GSA*LGGQKLVAVT 244
GS *LGG +LVAVT
Sbjct: 492 GSP*LGGHRLVAVT 533
>gb|CW330582.1|CW330582 104_827_11480451_116_36011_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480451, DNA
sequence
Length = 683
Score = 146 bits (313), Expect(4) = 6e-056
Identities = 55/91 (60%), Positives = 67/91 (73%)
Frame = +2 / +1
Query: 296 GGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLIT 475
GGWC PPRPHFD++ P + +I Y AG++ V Y+RV C KSGGVRFTI GF F +VLIT
Sbjct: 358 GGWCAPPRPHFDMSQPAWENIGIYSAGVINVLYQRVKCWKSGGVRFTIAGFNGFYMVLIT 537
Query: 476 NVAGAGDVVRASVKAASTGWLPMSRNWGQNW 568
NVAG+G + +VK ST W+PM RNWG NW
Sbjct: 538 NVAGSGSIQSMAVKGNSTDWIPMYRNWGANW 630
Score = 87.7 bits (185), Expect(3) = 3e-026
Identities = 45/93 (48%), Positives = 50/93 (53%)
Frame = -1 / -1
Query: 570 CQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR* 391
CQ PQFL MG VL T P PAT V+ST K KP +V RTPP +H TR *
Sbjct: 632 CQLAPQFLYMGIQSVLLPFTAML*MEPLPATLVMSTM*KPLKPAMVKRTPPLFQHLTRW* 453
Query: 390 ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPS 292
T PA M+ G SK GRGG HQPP+
Sbjct: 452 RTLMTPAL*MPMFSQAGWDMSKWGRGGAHQPPA 354
Score = 56.5 bits (117), Expect(4) = 6e-056
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +2 / +1
Query: 107 QGYGVNNAALSTALFDEGLRCGACFEIRCE 196
QGYG+NNAALSTALF++G CG C+ I C+
Sbjct: 160 QGYGINNAALSTALFNDGASCGQCYVIICD 249
Score = 49.6 bits (102), Expect(4) = 6e-056
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +2 / +1
Query: 212 RWCRPGRPSILVTATNFCPPNYALPS 289
+WC+PG ++V+ATNFCPPN+ LP+
Sbjct: 262 QWCKPGNNWVVVSATNFCPPNWDLPA 339
Score = 35.4 bits (71), Expect(3) = 3e-026
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -1 / -1
Query: 195 SHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
S +++ H P +PS SAVLSAAL P P + P P
Sbjct: 248 SQMMT*HCPHDAPSLKSAVLSAALLMP*PCSYRSLYPHAP 129
Score = 35.0 bits (70), Expect(3) = 3e-026
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -1 / -1
Query: 285 GSA*LGGQKLVAVTRMEGLPGRHH 214
G + LGGQKLVA T + LPG HH
Sbjct: 335 GRSQLGGQKLVAETTTQLLPGLHH 264
Score = 24.0 bits (46), Expect(4) = 6e-056
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1 / +1
Query: 73 GGACGYGNL*QPG 111
GGACGY +L + G
Sbjct: 127 GGACGYSDLYEQG 165
>gb|CW079162.1|CW079162 104_398_10899280_114_32367_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899280, DNA
sequence
Length = 685
Score = 151 bits (325), Expect(2) = 1e-055
Identities = 58/91 (63%), Positives = 69/91 (75%)
Frame = +2 / +1
Query: 257 NFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFT 436
NFCPPNYAL S+ GGWCNPPR HFD+A P + I Y+ GIVPV +RRVPCR+ GGVRFT
Sbjct: 1 NFCPPNYALASNGGGWCNPPRQHFDMAQPAWERIGVYQGGIVPVLFRRVPCRRRGGVRFT 180
Query: 437 INGFRYFNLVLITNVAGAGDVVRASVKAAST 529
++G YF LVL+TNVAGAG V V+ S+
Sbjct: 181 VSGRDYFELVLVTNVAGAGAVRAMDVRGTSS 273
Score = 102 bits (218), Expect(2) = 1e-031
Identities = 50/89 (56%), Positives = 55/89 (61%)
Frame = -1 / -3
Query: 525 LAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRN 346
L LT T+PAPAT V ST K PL VNRTPP GTRR TGT+P + + +
Sbjct: 269 LVPLTSMARTAPAPATLVTSTSSK*SLPLTVNRTPPRRLQGTRRNSTGTIPPW*TPIRSH 90
Query: 345 MGMARSKCGRGGLHQPPSSEGSA*LGGQK 259
G A SKC RGGLH PP E SA*LGGQK
Sbjct: 89 AGCAMSKCCRGGLHHPPPLEASA*LGGQK 3
Score = 87.2 bits (184), Expect(2) = 1e-055
Identities = 33/58 (56%), Positives = 40/58 (68%)
Frame = +2 / +1
Query: 521 ASTGWLPMSRNWGQNWQSNAILVGQALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGK 694
+S GW+PMSRNWG NWQS A L GQ LSFRVTA D +T + P +W FGQT+ +
Sbjct: 268 SSAGWMPMSRNWGANWQSLAYLNGQGLSFRVTADDGQTVVFADVVPPSWTFGQTYASR 441
Score = 55.6 bits (115), Expect(2) = 1e-031
Identities = 27/51 (52%), Positives = 27/51 (52%)
Frame = -1 / -3
Query: 681 VWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHP 529
V PN G V S AVTR ES P R A DCQ PQFLDMG HP
Sbjct: 428 VCPNVHDGGTTSANTTVCPSSAVTRNESPCPLRYARDCQLAPQFLDMGIHP 276
>gb|CW409489.1|CW409489 fsbb001f103n01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f103n01, DNA
sequence
Length = 667
Score = 166 bits (356), Expect(4) = 2e-055
Identities = 65/122 (53%), Positives = 83/122 (68%)
Frame = +2 / -1
Query: 293 DGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLI 472
+GGWC P RPHFD++ P + HI Y AG+VPV Y++V C ++GGVRF++ G +YF LV I
Sbjct: 367 NGGWCGPGRPHFDMSQPAWEHIGIYSAGVVPVLYQQVKCSRTGGVRFSLAGSQYFLLVNI 188
Query: 473 TNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQALSFRVTASDRRTSTSWNA 652
N+ G+G V A VK TGW+ MSRNWG NWQ+ A LVGQ LSF VT + + WN
Sbjct: 187 QNLGGSGSVGAAWVKGDKTGWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNV 8
Query: 653 AP 658
P
Sbjct: 7 VP 2
Score = 101 bits (216), Expect(3) = 3e-029
Identities = 53/121 (43%), Positives = 60/121 (49%)
Frame = -1 / +3
Query: 657 GAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPAT 478
G FQ + VT K S WPT A CQ PQFLD+ HPVL+ T A T P P
Sbjct: 3 GTTFQN*MYCPPVVVTAKLSPWPTSPASACQLAPQFLDIWIHPVLSPFTHAAPTEPLPPR 182
Query: 477 FVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQP 298
F + T KY +P + RTPP H T TGT PA M + G SK GR G H P
Sbjct: 183 FWMLTSRKYWEPARLKRTPPVREHLTCWYRTGTTPAL*MPMCSHAGCDMSKWGRPGPHHP 362
Query: 297 P 295
P
Sbjct: 363 P 365
Score = 48.7 bits (100), Expect(4) = 2e-055
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2 / -1
Query: 110 GYGVNNAALSTALFDEGLRCGACFEIRCE 196
GYGVNNAAL LF++G CG C+ I C+
Sbjct: 544 GYGVNNAALGPTLFNDGASCGQCYLITCD 458
Score = 41.8 bits (85), Expect(3) = 3e-029
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -1 / +3
Query: 195 SHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
S ++ H P +PS N SAALFTPYP L +++ P P
Sbjct: 459 SQVMR*HCPHDAPSLNKVGPSAALFTPYPALYRLSYPHAP 578
Score = 35.4 bits (71), Expect(4) = 2e-055
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / -1
Query: 236 SILVTATNFCPPNYALPS 289
SI V+ATN CP NYALP+
Sbjct: 418 SITVSATNLCPSNYALPN 365
Score = 24.9 bits (48), Expect(4) = 2e-055
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1 / -1
Query: 73 GGACGYGNL*QPG 111
GGACGY NL G
Sbjct: 580 GGACGYDNLYNAG 542
Score = 24.4 bits (47), Expect(3) = 3e-029
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1 / +3
Query: 285 GSA*LGGQKLVAVTRME 235
GSA*L G +LVA T ME
Sbjct: 369 GSA*LDGHRLVADTVME 419
>gb|BG240827.1|BG240827 OV1_38_G09.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 618
Score = 210 bits (454), Expect(3) = 8e-055
Identities = 88/103 (85%), Positives = 90/103 (87%)
Frame = +2 / +1
Query: 401 VPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNA 580
V S G INGFRYFNLVLITNVAGAGD+VRASVKA+STGWL MSRNWGQNWQSNA
Sbjct: 22 VASSSSQGSNQAINGFRYFNLVLITNVAGAGDIVRASVKASSTGWLTMSRNWGQNWQSNA 201
Query: 581 ILVGQALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNFRV* 709
ILVGQALSFRVT SDRRTSTSWNAAP WQFGQTFEGKNFRV*
Sbjct: 202 ILVGQALSFRVTGSDRRTSTSWNAAPRNWQFGQTFEGKNFRV* 330
Score = 201 bits (433), Expect(3) = 7e-054
Identities = 82/92 (89%), Positives = 85/92 (92%)
Frame = -1 / -2
Query: 711 HQTLKFLPSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSH 532
HQTLKFLPSKVWPNCQ+ GAAFQ+VEVRRSL VTRKESAWPTRMALDCQFWPQF DM SH
Sbjct: 332 HQTLKFLPSKVWPNCQLRGAAFQDVEVRRSLPVTRKESAWPTRMALDCQFWPQFRDMVSH 153
Query: 531 PVLAALTLARTTSPAPATFVISTRLKYRKPLI 436
PVL A TLART SPAPATFVISTRLKYRKPL+
Sbjct: 152 PVLDAFTLARTMSPAPATFVISTRLKYRKPLM 57
Score = 123 bits (263), Expect = 5e-027
Identities = 50/53 (94%), Positives = 50/53 (94%)
Frame = -3 / -1
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVD 437
LADEDGVGLPVLAPVPGHGQPPGAGRL ARAH V RAGHVRDQHQVEVPEAVD
Sbjct: 216 LADEDGVGLPVLAPVPGHGQPPGAGRLHARAHDVTRAGHVRDQHQVEVPEAVD 58
Score = 58.3 bits (121), Expect(3) = 3e-023
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +3 / +2
Query: 438 STASGTSTWC*SRTWPARGTWCARASR 518
STASGTSTWC*SRTWPAR T CARA R
Sbjct: 59 STASGTSTWC*SRTWPARVTSCARA*R 139
Score = 52.4 bits (108), Expect(3) = 3e-023
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +1 / +3
Query: 532 VAAHVQELGPELAVQRHPRRPGA 600
VA HV ELGPELAVQRHPRRPGA
Sbjct: 153 VADHVPELGPELAVQRHPRRPGA 221
Score = 37.3 bits (75), Expect(3) = 3e-023
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1 / +3
Query: 667 AVRPDLRGQELQGLM 711
AVRPDLRGQELQGLM
Sbjct: 288 AVRPDLRGQELQGLM 332
Score = 29.5 bits (58), Expect(3) = 7e-054
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -3
Query: 982 PIHTSCSEEKTPFFQR 935
P CSE KTPFFQR
Sbjct: 559 PFCPPCSEAKTPFFQR 512
Score = 24.4 bits (47), Expect(3) = 7e-054
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2 / -1
Query: 1025 GPKRRQYTLTNSRESH 978
GP R+QYTLT+ H
Sbjct: 591 GPARQQYTLTDPFAPH 544
Score = 24.0 bits (46), Expect(3) = 8e-055
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1 / +2
Query: 979 WDSLEFVRVYCRLFGP 1026
W + VRVYC L GP
Sbjct: 545 WGAKGSVRVYCCLAGP 592
Score = 23.5 bits (45), Expect(3) = 8e-055
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1 / +1
Query: 892 *GHAFRPP*SQVQVLSEKMESFLLNKMCG 978
*GH P* VQ S + + FLL M G
Sbjct: 466 *GHHVFSP*FDVQAKSSEKKEFLLLNMGG 552
>gb|BG556631.1|BG556631 EM1_37_F06.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 448
Score = 129 bits (277), Expect(3) = 2e-054
Identities = 48/62 (77%), Positives = 53/62 (85%)
Frame = +2 / +2
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
S++VTATNFCPPN ALPSDDGGWCNPPR HFD++ P+F IA YRAGIVPVSYRRV C K
Sbjct: 263 SVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNK 442
Query: 416 SG 421
G
Sbjct: 443 KG 448
Score = 92.7 bits (196), Expect(3) = 8e-034
Identities = 45/62 (72%), Positives = 45/62 (72%)
Frame = -1 / -2
Query: 420 PDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTR 241
P L H T R*ETGTMPA SAM N G SK RGGLHQPPSSEGSA LGGQKLVAVT
Sbjct: 447 PFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSSEGSALLGGQKLVAVTT 268
Query: 240 ME 235
E
Sbjct: 267 TE 262
Score = 66.6 bits (139), Expect(3) = 2e-054
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPG 208
SQGYG N AALSTALF+ GL CGACFE+RC+ G
Sbjct: 134 SQGYGTNTAALSTALFNSGLSCGACFEVRCDAAGG 238
Score = 57.0 bits (118), Expect(3) = 2e-054
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = +1 / +2
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGNL G
Sbjct: 59 AHATFYGGGDASGTMGGACGYGNLYSQG 142
Score = 51.0 bits (105), Expect(3) = 8e-034
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = -1 / -2
Query: 207 PGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
P +S SK APQ P SAVLSAA+ PYPWL ++ P P
Sbjct: 237 PPAASQRTSKQAPQLRPLLKSAVLSAAVLVPYPWL*RLPYPHAP 106
Score = 40.0 bits (81), Expect(3) = 8e-034
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 98 RLPYPQAPPIKPKASLPP*NVA 33
RLPYP APP+ P AS PP* VA
Sbjct: 129 RLPYPHAPPMVPDASPPP*KVA 64
>gb|BE917749.1|BE917749 OV1_6_F07.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 581
Score = 137 bits (294), Expect(3) = 3e-054
Identities = 49/58 (84%), Positives = 54/58 (93%)
Frame = +2 / +1
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPC 409
+I VTATNFCPPNY LPSDDGGWCNPPRPHFD+A P FLHIA+YRAGIVPV++RRVPC
Sbjct: 403 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVAFRRVPC 576
Score = 101 bits (216), Expect(3) = 3e-032
Identities = 44/57 (77%), Positives = 44/57 (77%)
Frame = -1 / -1
Query: 408 HGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRM 238
HGT TGTMPARY AMWR G A SKCGRGGLHQPPSS G *LGGQKLVAVT M
Sbjct: 575 HGTLLKATGTMPARYCAMWRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 405
Score = 58.3 bits (121), Expect(3) = 3e-054
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCE 196
S GYG N AALSTALF++G CG+C+E+RC+
Sbjct: 283 STGYGTNTAALSTALFNDGAACGSCYELRCD 375
Score = 57.0 bits (118), Expect(3) = 3e-054
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGNL G
Sbjct: 208 AHATFYGGGDASGTMGGACGYGNLYSTG 291
Score = 52.4 bits (108), Expect(3) = 3e-032
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = -2 / -1
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACA 27
P +RLPYP APPI P AS PP*NVACA
Sbjct: 290 PVLYRLPYPHAPPIVPDASPPP*NVACA 207
Score = 24.0 bits (46), Expect(3) = 3e-032
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2 / -2
Query: 140 CSAPRCSRRTPGC 102
CSAP CS RT C
Sbjct: 319 CSAPPCSCRTRCC 281
>gb|CX620549.1|CX620549 GABR1_52_C02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_52_C02_A002 5', mRNA sequence
Length = 545
Score = 140 bits (300), Expect(3) = 3e-054
Identities = 51/62 (82%), Positives = 55/62 (88%)
Frame = +2 / +2
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
+I VTATNFCPPNY LPSDDGGWCNPPRPHFD+A P FL IA+YRAGIVPV+YRRVPC K
Sbjct: 359 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 538
Query: 416 SG 421
G
Sbjct: 539 KG 544
Score = 103 bits (220), Expect(3) = 4e-031
Identities = 45/61 (73%), Positives = 46/61 (75%)
Frame = -1 / -3
Query: 420 PDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTR 241
P HGT * TGTMPARY A+WR G A SKCGRGGLHQPPSS G *LGGQKLVAVT
Sbjct: 543 PFFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTV 364
Query: 240 M 238
M
Sbjct: 363 M 361
Score = 56.5 bits (117), Expect(3) = 3e-054
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCE 196
S GYG N AALSTALF+ G CG+C+E+RC+
Sbjct: 239 STGYGTNTAALSTALFNGGAACGSCYELRCD 331
Score = 56.1 bits (116), Expect(3) = 3e-054
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +1 / +2
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGN+ G
Sbjct: 164 AHATFYGGGDASGTMGGACGYGNMYSTG 247
Score = 42.8 bits (87), Expect(3) = 4e-031
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = -2 / -3
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACA 27
P + PYP APPI P AS PP*NVA A
Sbjct: 246 PVLYMFPYPHAPPIVPDASPPP*NVAWA 163
Score = 28.1 bits (55), Expect(3) = 4e-031
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -1
Query: 140 CSAPRCSRRTPGC 102
CSAP CS RTP C
Sbjct: 275 CSAPPCSCRTPCC 237
>gb|BG355452.1|BG355452 EM1_16_F05.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 542
Score = 137 bits (294), Expect(3) = 5e-054
Identities = 50/60 (83%), Positives = 54/60 (90%)
Frame = +2 / +3
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
+I VTATNFCPPNY LPSDDGGWCNPPRPHFD+A P FL IA+YRAGIVPV+YRRVPC K
Sbjct: 360 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 539
Score = 102 bits (217), Expect(3) = 1e-030
Identities = 44/57 (77%), Positives = 45/57 (78%)
Frame = -1 / -2
Query: 408 HGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRM 238
HGT * TGTMPARY A+WR G A SKCGRGGLHQPPSS G *LGGQKLVAVT M
Sbjct: 532 HGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 362
Score = 58.3 bits (121), Expect(3) = 5e-054
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCE 196
S GYG N AALSTALF++G CG+C+E+RC+
Sbjct: 240 STGYGTNTAALSTALFNDGAACGSCYELRCD 332
Score = 56.1 bits (116), Expect(3) = 5e-054
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +1 / +3
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGN+ G
Sbjct: 165 AHATFYGGGDASGTMGGACGYGNMYSTG 248
Score = 42.8 bits (87), Expect(3) = 1e-030
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = -2 / -2
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACA 27
P + PYP APPI P AS PP*NVA A
Sbjct: 247 PVLYMFPYPHAPPIVPDASPPP*NVAWA 164
Score = 28.1 bits (55), Expect(3) = 1e-030
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -3
Query: 140 CSAPRCSRRTPGC 102
CSAP CS RTP C
Sbjct: 276 CSAPPCSCRTPCC 238
>gb|BG052144.1|BG052144 RHIZ2_6_F11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 539
Score = 137 bits (294), Expect(3) = 5e-054
Identities = 50/60 (83%), Positives = 54/60 (90%)
Frame = +2 / +3
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
+I VTATNFCPPNY LPSDDGGWCNPPRPHFD+A P FL IA+YRAGIVPV+YRRVPC K
Sbjct: 357 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 536
Score = 102 bits (217), Expect(3) = 1e-030
Identities = 44/57 (77%), Positives = 45/57 (78%)
Frame = -1 / -2
Query: 408 HGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRM 238
HGT * TGTMPARY A+WR G A SKCGRGGLHQPPSS G *LGGQKLVAVT M
Sbjct: 529 HGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 359
Score = 58.3 bits (121), Expect(3) = 5e-054
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCE 196
S GYG N AALSTALF++G CG+C+E+RC+
Sbjct: 237 STGYGTNTAALSTALFNDGAACGSCYELRCD 329
Score = 56.1 bits (116), Expect(3) = 5e-054
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +1 / +3
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGN+ G
Sbjct: 162 AHATFYGGGDASGTMGGACGYGNMYSTG 245
Score = 42.8 bits (87), Expect(3) = 1e-030
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = -2 / -2
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACA 27
P + PYP APPI P AS PP*NVA A
Sbjct: 244 PVLYMFPYPHAPPIVPDASPPP*NVAWA 161
Score = 28.1 bits (55), Expect(3) = 1e-030
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -3
Query: 140 CSAPRCSRRTPGC 102
CSAP CS RTP C
Sbjct: 273 CSAPPCSCRTPCC 235
>gb|CD230048.1|CD230048 SS1_40_H09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_40_H09_A012 5', mRNA sequence
Length = 548
Score = 136 bits (292), Expect(3) = 9e-054
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +2 / +2
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPC 409
+I VTATNFCPPNY LPSDDGGWCNPPRPHFD+A P FL IA+YRAGIVPV+YRRVPC
Sbjct: 371 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPC 544
Score = 102 bits (217), Expect(3) = 1e-030
Identities = 44/57 (77%), Positives = 45/57 (78%)
Frame = -1 / -3
Query: 408 HGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRM 238
HGT * TGTMPARY A+WR G A SKCGRGGLHQPPSS G *LGGQKLVAVT M
Sbjct: 543 HGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 373
Score = 58.3 bits (121), Expect(3) = 9e-054
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCE 196
S GYG N AALSTALF++G CG+C+E+RC+
Sbjct: 251 STGYGTNTAALSTALFNDGAACGSCYELRCD 343
Score = 56.1 bits (116), Expect(3) = 9e-054
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +1 / +2
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGN+ G
Sbjct: 176 AHATFYGGGDASGTMGGACGYGNMYSTG 259
Score = 42.8 bits (87), Expect(3) = 1e-030
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = -2 / -3
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACA 27
P + PYP APPI P AS PP*NVA A
Sbjct: 258 PVLYMFPYPHAPPIVPDASPPP*NVAWA 175
Score = 28.1 bits (55), Expect(3) = 1e-030
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -1
Query: 140 CSAPRCSRRTPGC 102
CSAP CS RTP C
Sbjct: 287 CSAPPCSCRTPCC 249
>gb|CW448128.1|CW448128 fsbb001f181j14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f181j14, DNA
sequence
Length = 508
Score = 203 bits (438), Expect(2) = 2e-053
Identities = 76/136 (55%), Positives = 96/136 (70%)
Frame = +2 / +3
Query: 110 GYGVNNAALSTALFDEGLRCGACFEIRCEEQPGWRWCRPGRPSILVTATNFCPPNYALPS 289
GYG AALS L+++G CG C++I C+ Q RWCR G + V+ATN CPPNYA
Sbjct: 96 GYGQYTAALSQVLYNDGASCGQCYQISCDPQTDARWCRQGAGPVTVSATNLCPPNYAYSG 275
Query: 290 DDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVL 469
+GGWCNPPR HFD++ P +L I Y+ GI+PV Y+RVPC K GGVRFTI GF ++ LVL
Sbjct: 276 SNGGWCNPPRAHFDMSQPAWLKIGIYQGGIIPVLYQRVPCVKQGGVRFTITGFNHYELVL 455
Query: 470 ITNVAGAGDVVRASVK 517
I+NVAG+G V A V+
Sbjct: 456 ISNVAGSGSVASAWVQ 503
Score = 122 bits (262), Expect = 7e-027
Identities = 66/160 (41%), Positives = 80/160 (50%)
Frame = -1 / -1
Query: 522 AALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNM 343
A T A T P PAT +ST + P++V RTPP GTR TG MP + +
Sbjct: 508 APWTQALATEPLPATLEMSTSS*WLNPVMVKRTPPCFTQGTRWYSTGMMPPW*MPILSHA 329
Query: 342 GMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRMEGLPGRHHRHPGCSSHLISKHAPQR 163
G SKC RGGLHQPP A*LGG +LVA T P RHHR C SH I H P
Sbjct: 328 GWDMSKCARGGLHQPPLLPE*A*LGGHRLVAETVTGPAPCRHHRASVCGSHEIW*HCPHD 149
Query: 162 SPSSNSAVLSAALFTPYPWLSQVAVPAGPAHKAKSVAAAV 43
+PS L AA++ P P ++ P P + VA +
Sbjct: 148 APSLYRTWLRAAVYCP*PVAYRLPYPHAPPDRNVRVAVHI 29
Score = 27.6 bits (54), Expect(2) = 2e-053
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +3
Query: 73 GGACGYGNL 99
GGACGYGNL
Sbjct: 60 GGACGYGNL 86
>gb|BE361754.1|BE361754 DG1_82_G01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 541
Score = 134 bits (287), Expect(3) = 5e-053
Identities = 48/58 (82%), Positives = 52/58 (89%)
Frame = +2 / +1
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPC 409
+I VTATNFCPPNY LPSDDGGWCNPPRPHFD+A P FL IA+YRAGIVPV+YR VPC
Sbjct: 364 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYREVPC 537
Score = 102 bits (218), Expect(3) = 8e-031
Identities = 44/57 (77%), Positives = 45/57 (78%)
Frame = -1 / -3
Query: 408 HGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRM 238
HGT * TGTMPARY A+WR G A SKCGRGGLHQPPSS G *LGGQKLVAVT M
Sbjct: 536 HGTSL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 366
Score = 58.3 bits (121), Expect(3) = 5e-053
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCE 196
S GYG N AALSTALF++G CG+C+E+RC+
Sbjct: 244 STGYGTNTAALSTALFNDGAACGSCYELRCD 336
Score = 56.1 bits (116), Expect(3) = 5e-053
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGN+ G
Sbjct: 169 AHATFYGGGDASGTMGGACGYGNMYSTG 252
Score = 42.8 bits (87), Expect(3) = 8e-031
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = -2 / -3
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACA 27
P + PYP APPI P AS PP*NVA A
Sbjct: 251 PVLYMFPYPHAPPIVPDASPPP*NVAWA 168
Score = 28.1 bits (55), Expect(3) = 8e-031
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -1
Query: 140 CSAPRCSRRTPGC 102
CSAP CS RTP C
Sbjct: 280 CSAPPCSCRTPCC 242
>gb|CN139871.1|CN139871 OX1_24_D09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_D09_A002 5', mRNA sequence
Length = 727
Score = 120 bits (256), Expect(4) = 1e-052
Identities = 45/78 (57%), Positives = 55/78 (70%)
Frame = +2 / +1
Query: 293 DGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLI 472
+GGWCN RPHFD+A P F I Y GI+PV Y+RVPC K GGVRF++NG Y NLVL+
Sbjct: 493 EGGWCNQHRPHFDMAQPAFEKIGVYSGGIIPVMYKRVPCVKRGGVRFSVNGHDYINLVLV 672
Query: 473 TNVAGAGDVVRASVKAAS 526
TNVA AG + VK ++
Sbjct: 673 TNVAAAGSIKSMEVKTSN 726
Score = 76.2 bits (160), Expect(4) = 2e-027
Identities = 38/78 (48%), Positives = 43/78 (55%)
Frame = -1 / -3
Query: 525 LAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRN 346
L LT PA AT V STRL PL +N TPP GT TG +P Y+ ++ N
Sbjct: 725 LDVLTSMDLMEPAAATLVTSTRLM*SWPLTLNLTPPRFTQGTLLYMTGIIPPLYTPIFSN 546
Query: 345 MGMARSKCGRGGLHQPPS 292
G A SKCGR LHQPPS
Sbjct: 545 AGCAMSKCGRC*LHQPPS 492
Score = 55.1 bits (114), Expect(4) = 1e-052
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1 / +1
Query: 25 RAHATFYGGSDAFGFMGGACGYGNL*QPG 111
+AHATFYGG+DA MGGACGYGNL G
Sbjct: 232 KAHATFYGGADASDTMGGACGYGNLYSQG 318
Score = 52.4 bits (108), Expect(4) = 1e-052
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQ 202
SQGYG AALST LF++G CG C++I C+ +
Sbjct: 310 SQGYGTRTAALSTVLFNDGASCGQCYKIACDRK 408
Score = 42.3 bits (86), Expect(4) = 2e-027
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -2 / -3
Query: 98 RLPYPQAPPIKPKASLPP*NVACA 27
R PYP APP+ +AS PP* VACA
Sbjct: 305 RFPYPHAPPMVSEASAPP*KVACA 234
Score = 37.7 bits (76), Expect(4) = 1e-052
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2 / +1
Query: 236 SILVTATNFCPPNYALP 286
++ VTATNFCPPN ALP
Sbjct: 442 TVTVTATNFCPPNMALP 492
Score = 33.6 bits (67), Expect(4) = 2e-027
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -1 / -3
Query: 195 SHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
S I H P +PS VLSAA+ P PW + P P
Sbjct: 401 SQAIL*HCPHEAPSLKRTVLSAAVRVP*PWE*RFPYPHAP 282
Score = 27.2 bits (53), Expect(4) = 2e-027
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 285 GSA*LGGQKLVAVT 244
GSA LGGQK VAVT
Sbjct: 491 GSAMLGGQKFVAVT 450
>gb|CL195140.1|CL195140 104_420_10942159_114_32302_028 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942159, DNA
sequence
Length = 654
Score = 160 bits (345), Expect(2) = 3e-052
Identities = 61/96 (63%), Positives = 74/96 (77%)
Frame = +2 / -2
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
+++VTATN CPPN +D GGWCNPPR HFDL+MP FL IAE +AGIVPVSYRRV C +
Sbjct: 632 ALVVTATNLCPPNEQ*SADSGGWCNPPREHFDLSMPAFLQIAEEKAGIVPVSYRRVACAR 453
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAA 523
GG+R+ I G +YFN+V +TNV GAGDV SVK +
Sbjct: 452 QGGIRYAIAGNKYFNMVTVTNVGGAGDVAAVSVKGS 345
Score = 124 bits (265), Expect(2) = 2e-027
Identities = 57/94 (60%), Positives = 59/94 (62%)
Frame = -1 / +1
Query: 525 LAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRN 346
L T TSPAP T V T LKY P + R PP L H TRR*ETGTMPA SA+WRN
Sbjct: 343 LLPFTDTAATSPAPPTLVTVTMLKYLFPAMAYRMPPCLAHATRR*ETGTMPAFSSAIWRN 522
Query: 345 MGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVT 244
GM RSKC RGGLH PP S LGG K VAVT
Sbjct: 523 AGMDRSKCSRGGLHHPPLSADYCSLGGHKFVAVT 624
Score = 66.6 bits (139), Expect(2) = 3e-052
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +2 / -2
Query: 533 WLPMSRNWGQNWQSNAILVGQALSFRVTASDRRTSTSWNAAPSTWQFGQTFE 688
W + RNWG WQ+ L ++L+FRV D R +TSW+ P W+FG T++
Sbjct: 332 WTELKRNWGVVWQTGEDLTCESLTFRVMTGDHRKATSWHVLPEDWKFGVTYQ 177
Score = 22.6 bits (43), Expect(2) = 2e-027
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2 / +2
Query: 962 RRKDSIFSERTWTWD*GGRKA*P* 891
RR S R TW GGR++ P*
Sbjct: 188 RRTSSPRGGRATTWPCGGRRSSP* 259
>gb|CN151326.1|CN151326 WOUND1_74_G01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_74_G01_A002 5', mRNA sequence
Length = 813
Score = 129 bits (277), Expect(3) = 6e-052
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +2 / +3
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVP 406
+I VTATNFCPPNY LPSDDGGWCNPPRPHFD+A P FLHIA+YRAGIVPV++RR P
Sbjct: 393 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVAFRR*P 563
Score = 97.3 bits (206), Expect(3) = 8e-031
Identities = 41/50 (82%), Positives = 41/50 (82%)
Frame = -1 / -3
Query: 387 TGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRM 238
TGTMPARY AMWR G A SKCGRGGLHQPPSS G *LGGQKLVAVT M
Sbjct: 544 TGTMPARYCAMWRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 395
Score = 58.3 bits (121), Expect(3) = 6e-052
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCE 196
S GYG N AALSTALF++G CG+C+E+RC+
Sbjct: 273 STGYGTNTAALSTALFNDGAACGSCYELRCD 365
Score = 57.0 bits (118), Expect(3) = 6e-052
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = +1 / +3
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGNL G
Sbjct: 198 AHATFYGGGDASGTMGGACGYGNLYSTG 281
Score = 52.4 bits (108), Expect(3) = 8e-031
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = -2 / -3
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACA 27
P +RLPYP APPI P AS PP*NVACA
Sbjct: 280 PVLYRLPYPHAPPIVPDASPPP*NVACA 197
Score = 24.0 bits (46), Expect(3) = 8e-031
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2 / -1
Query: 140 CSAPRCSRRTPGC 102
CSAP CS RT C
Sbjct: 309 CSAPPCSCRTRCC 271
>gb|CX607108.1|CX607108 ANR1_6_F04.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_F04_A002 5', mRNA sequence
Length = 794
Score = 178 bits (384), Expect(2) = 8e-052
Identities = 71/124 (57%), Positives = 85/124 (68%)
Frame = +2 / +1
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
SI+VTATNFC PNY LP+D GG CNPP HF L + F IA ++AGI+P+ YRRV C +
Sbjct: 421 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 600
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GGVRF++NG +F VLI+NV GAGDV +K GWL M RNWGQ W N + GQ
Sbjct: 601 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLSMGRNWGQVWHINCDMRGQ 780
Query: 596 ALSF 607
LSF
Sbjct: 781 PLSF 792
Score = 112 bits (239), Expect(2) = 1e-029
Identities = 57/119 (47%), Positives = 64/119 (53%)
Frame = -1 / -1
Query: 591 PTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDL 412
P L C WPQ + SHP L TSPAP T +I T K +PL N TPP
Sbjct: 776 PLMSQLMCHTWPQLRPIESHPNSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSR 597
Query: 411 RHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRME 235
RH TRR G MPA SA++ N M R K GGL PP+S G * G QKLVAVT +E
Sbjct: 596 RHLTRRYWMGMMPAFQSAIFSNDWMGRRKWWLGGLQWPPASAGRP*FGAQKLVAVTTIE 420
Score = 47.3 bits (97), Expect(2) = 8e-052
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / +1
Query: 110 GYGVNNAALSTALFDEGLRCGACFEIRC 193
GYG+ LSTALF+ G CG C+E++C
Sbjct: 304 GYGMATVGLSTALFERGAACGGCYEVKC 387
Score = 39.1 bits (79), Expect(2) = 1e-029
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = -1 / -1
Query: 195 SHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGPAHKAKSVAA 49
+HL S P +P SNSAVLS + PYP + P P + AA
Sbjct: 389 THLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPHAPPMASSGSAA 243
>gb|CW487002.1|CW487002 fsbb001f252j13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f252j13, DNA
sequence
Length = 562
Score = 139 bits (298), Expect(4) = 8e-050
Identities = 53/93 (56%), Positives = 67/93 (72%)
Frame = +2 / +2
Query: 293 DGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLI 472
+GGWC P RPHFD++ P + HI +AGI+PV Y++V C ++GGVRF+I G +YF LV I
Sbjct: 284 NGGWCGPGRPHFDMSQPAWEHIGVVQAGIIPVLYQQVRCTRTGGVRFSIAGSQYFLLVNI 463
Query: 473 TNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQ 571
NV G+G V A VK TGW+ MSRNWG NWQ
Sbjct: 464 QNVGGSGAVGAAWVKGDKTGWIQMSRNWGANWQ 562
Score = 95.0 bits (201), Expect(3) = 1e-027
Identities = 44/92 (47%), Positives = 53/92 (57%)
Frame = -1 / -2
Query: 570 CQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR* 391
CQ PQFLD+ HPVL+ T A T+P P TF + T KY +P ++ RTPP H T
Sbjct: 561 CQLAPQFLDIWIHPVLSPFTQAAPTAPLPPTFWMLTSRKYWEPAMLKRTPPVRVHLTCWY 382
Query: 390 ETGTMPARYSAMWRNMGMARSKCGRGGLHQPP 295
TG MPA + M + G SKCGR G H PP
Sbjct: 381 RTGMMPACTTPMCSHAGCDMSKCGRPGPHHPP 286
Score = 49.2 bits (101), Expect(4) = 8e-050
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2 / +2
Query: 110 GYGVNNAALSTALFDEGLRCGACFEIRCE 196
GYG+NNAALS LF+ G CG C+ I C+
Sbjct: 107 GYGINNAALSQTLFNNGASCGQCYLITCD 193
Score = 42.8 bits (87), Expect(3) = 1e-027
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = -1 / -2
Query: 195 SHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
SH+I H P +P NS LSAAL PYP L ++ P P
Sbjct: 192 SHVIR*HCPHDAPLLNSVWLSAALLMPYPALYRLPYPHAP 73
Score = 37.3 bits (75), Expect(4) = 8e-050
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / +2
Query: 236 SILVTATNFCPPNYALPS 289
SI V+ATN CPPNY LP+
Sbjct: 233 SITVSATNLCPPNYGLPN 286
Score = 29.9 bits (59), Expect(4) = 8e-050
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +2
Query: 67 FMGGACGYGNL*QPG 111
++GGACGYGNL G
Sbjct: 65 YVGGACGYGNLYNAG 109
Score = 25.4 bits (49), Expect(3) = 1e-027
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1 / -2
Query: 285 GSA*LGGQKLVAVTRME 235
GS *LGG +LVA T ME
Sbjct: 282 GSP*LGGHRLVADTVME 232
>gb|CW416746.1|CW416746 fsbb001f117h02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f117h02, DNA
sequence
Length = 725
Score = 183 bits (395), Expect(2) = 9e-050
Identities = 71/131 (54%), Positives = 90/131 (68%)
Frame = +2 / -2
Query: 293 DGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLI 472
+GGWC P RPHFD++ P + HI Y AG+VPV Y++V C ++GGVRF++ G +YF LV I
Sbjct: 574 NGGWCGPGRPHFDMSQPAWEHIGIYSAGVVPVLYQQVKCSRTGGVRFSLAGSQYFLLVNI 395
Query: 473 TNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQALSFRVTASDRRTSTSWNA 652
N+ G+G V A VK TGW+ MSRNWG NWQ+ A LVGQ LSF VT + + WN
Sbjct: 394 QNLGGSGSVGAAWVKGDKTGWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNV 215
Query: 653 APSTWQFGQTF 685
P WQFGQT+
Sbjct: 214 VPGWWQFGQTY 182
Score = 110 bits (234), Expect(2) = 2e-024
Identities = 57/129 (44%), Positives = 64/129 (49%)
Frame = -1 / +3
Query: 681 VWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLAR 502
V PNC G FQ + VT K S WPT A CQ PQFLD+ HPVL+ T A
Sbjct: 186 VCPNCHHPGTTFQN*MYCPPVVVTAKLSPWPTSPASACQLAPQFLDIWIHPVLSPFTHAA 365
Query: 501 TTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKC 322
T P P F + T KY +P + RTPP H T TGT PA M + G SK
Sbjct: 366 PTEPLPPRFWMLTSRKYWEPARLKRTPPVREHLTCWYRTGTTPAL*MPMCSHAGCDMSKW 545
Query: 321 GRGGLHQPP 295
GR G H PP
Sbjct: 546 GRPGPHHPP 572
Score = 35.4 bits (71), Expect(2) = 9e-050
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / -2
Query: 236 SILVTATNFCPPNYALPS 289
SI V+ATN CP NYALP+
Sbjct: 625 SITVSATNLCPSNYALPN 572
Score = 24.4 bits (47), Expect(2) = 2e-024
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1 / +3
Query: 285 GSA*LGGQKLVAVTRME 235
GSA*L G +LVA T ME
Sbjct: 576 GSA*LDGHRLVADTVME 626
>gb|CW330583.1|CW330583 104_827_11480451_148_36012_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480451, DNA
sequence
Length = 689
Score = 146 bits (313), Expect(3) = 3e-048
Identities = 55/91 (60%), Positives = 67/91 (73%)
Frame = +2 / -3
Query: 296 GGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLIT 475
GGWC PPRPHFD++ P + +I Y AG++ V Y+RV C KSGGVRFTI GF F +VLIT
Sbjct: 579 GGWCAPPRPHFDMSQPAWENIGIYSAGVINVLYQRVKCWKSGGVRFTIAGFNGFYMVLIT 400
Query: 476 NVAGAGDVVRASVKAASTGWLPMSRNWGQNW 568
NVAG+G + +VK ST W+PM RNWG NW
Sbjct: 399 NVAGSGSIQSMAVKGNSTDWIPMYRNWGANW 307
Score = 87.7 bits (185), Expect(2) = 5e-021
Identities = 45/93 (48%), Positives = 50/93 (53%)
Frame = -1 / +2
Query: 570 CQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR* 391
CQ PQFL MG VL T P PAT V+ST K KP +V RTPP +H TR *
Sbjct: 305 CQLAPQFLYMGIQSVLLPFTAML*MEPLPATLVMSTM*KPLKPAMVKRTPPLFQHLTRW* 484
Query: 390 ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPS 292
T PA M+ G SK GRGG HQPP+
Sbjct: 485 RTLMTPAL*MPMFSQAGWDMSKWGRGGAHQPPA 583
Score = 49.6 bits (102), Expect(3) = 3e-048
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +2 / -3
Query: 212 RWCRPGRPSILVTATNFCPPNYALPS 289
+WC+PG ++V+ATNFCPPN+ LP+
Sbjct: 675 QWCKPGNNWVVVSATNFCPPNWDLPA 598
Score = 36.8 bits (74), Expect(3) = 3e-048
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2 / -3
Query: 584 LVGQALSFRVTASDRRTSTSWNAAPSTWQFGQTF 685
LVGQ LSF + ++ + + P+ WQFGQT+
Sbjct: 288 LVGQGLSFALVSTGGQNLVFKDVVPAWWQFGQTY 187
Score = 35.0 bits (70), Expect(2) = 5e-021
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -1 / +2
Query: 285 GSA*LGGQKLVAVTRMEGLPGRHH 214
G + LGGQKLVA T + LPG HH
Sbjct: 602 GRSQLGGQKLVAETTTQLLPGLHH 673
>gb|CW079177.1|CW079177 104_399_10899353_114_32392_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899353, DNA
sequence
Length = 645
Score = 121 bits (258), Expect(4) = 3e-048
Identities = 47/71 (66%), Positives = 55/71 (77%)
Frame = +2 / -2
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
S++VTATNFCPPN ALPSDDGGWCNPPR HFD++ P+F IA YRAGIVPVSYRR +
Sbjct: 218 SVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRSVVKS 39
Query: 416 SGGVRFTINGF 448
+ F I+ F
Sbjct: 38 TRWFLFAISIF 6
Score = 84.9 bits (179), Expect(3) = 3e-026
Identities = 41/54 (75%), Positives = 41/54 (75%)
Frame = -1 / +1
Query: 396 R*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRME 235
R*ETGTMPA SAM N G SK RGGLHQPPSSEGSA LGGQKLVAVT E
Sbjct: 58 R*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSSEGSALLGGQKLVAVTTTE 219
Score = 66.6 bits (139), Expect(4) = 3e-048
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +2 / -2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPG 208
SQGYG N AALSTALF+ GL CGACFE+RC+ G
Sbjct: 347 SQGYGTNTAALSTALFNSGLSCGACFEVRCDAAGG 243
Score = 51.0 bits (105), Expect(3) = 3e-026
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = -1 / +1
Query: 207 PGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
P +S SK APQ P SAVLSAA+ PYPWL ++ P P
Sbjct: 244 PPAASQRTSKQAPQLRPLLKSAVLSAAVLVPYPWL*RLPYPHAP 375
Score = 34.5 bits (69), Expect(4) = 3e-048
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +1 / -3
Query: 28 AHATFYGGSDAFGFMG 75
AHATFYGG DA G MG
Sbjct: 523 AHATFYGGGDASGTMG 476
Score = 28.1 bits (55), Expect(4) = 3e-048
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / -2
Query: 73 GGACGYGNL*QPG 111
GGACGYGNL G
Sbjct: 377 GGACGYGNLYSQG 339
Score = 22.1 bits (42), Expect(3) = 3e-026
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1 / +2
Query: 72 HKAKSVAAAVERGVRASTR 16
H A VAAAVE GV R
Sbjct: 479 HGAGRVAAAVEGGVSRGPR 535
>gb|CN137045.1|CN137045 OX1_54_H01.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_54_H01_A002 5', mRNA sequence
Length = 690
Score = 120 bits (256), Expect(4) = 4e-048
Identities = 45/86 (52%), Positives = 61/86 (70%)
Frame = +2 / +1
Query: 293 DGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLI 472
+GGWC P RPHFD++ P + HI Y G+VPV Y++V C ++GGVRF+++G +YF LV I
Sbjct: 433 NGGWCGPGRPHFDMSQPAWEHIGIYSGGVVPVLYQQVKCSRTGGVRFSLDGSQYFLLVNI 612
Query: 473 TNVAGAGDVVRASVKAASTGWLPMSR 550
N+ G+G V A VK TGW+ MSR
Sbjct: 613 QNLGGSGSVGAAWVKGDKTGWIQMSR 690
Score = 68.4 bits (143), Expect(4) = 1e-022
Identities = 36/85 (42%), Positives = 42/85 (49%)
Frame = -1 / -2
Query: 549 LDMGSHPVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPA 370
LD+ HPVL+ T A T P P F + T KY +P + RTPP H T TGT P
Sbjct: 689 LDIWIHPVLSPFTHAAPTEPLPPRFWMLTSRKYWEPSRLKRTPPVREHLTCWYRTGTTPP 510
Query: 369 RYSAMWRNMGMARSKCGRGGLHQPP 295
M + G SK GR G H PP
Sbjct: 509 L*MPMCSHAGCDMSKWGRPGPHHPP 435
Score = 48.7 bits (100), Expect(4) = 4e-048
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2 / +1
Query: 110 GYGVNNAALSTALFDEGLRCGACFEIRCE 196
GYGVNNAAL LF++G CG C+ I C+
Sbjct: 256 GYGVNNAALGPTLFNDGASCGQCYLITCD 342
Score = 45.5 bits (93), Expect(4) = 4e-048
Identities = 18/26 (69%), Positives = 18/26 (69%)
Frame = +1 / +1
Query: 34 ATFYGGSDAFGFMGGACGYGNL*QPG 111
ATFYGG D G MGGACGY NL G
Sbjct: 181 ATFYGGVDTSGTMGGACGYDNLYNAG 258
Score = 40.5 bits (82), Expect(4) = 1e-022
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -2 / -2
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVA 33
P +RL YP APPI P S PP* VA
Sbjct: 257 PALYRLSYPHAPPIVPDVSTPP*KVA 180
Score = 35.4 bits (71), Expect(4) = 4e-048
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / +1
Query: 236 SILVTATNFCPPNYALPS 289
SI V+ATN CP NYALP+
Sbjct: 382 SITVSATNLCPSNYALPN 435
Score = 29.5 bits (58), Expect(4) = 1e-022
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 134 APRCSRRTPGC 102
APRCSRRTP C
Sbjct: 280 APRCSRRTPRC 248
Score = 24.4 bits (47), Expect(4) = 1e-022
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1 / -2
Query: 285 GSA*LGGQKLVAVTRME 235
GSA*L G +LVA T ME
Sbjct: 431 GSA*LDGHRLVADTVME 381
>gb|CX616057.1|CX616057 GABR1_25_C11.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_25_C11_A002 5', mRNA sequence
Length = 688
Score = 116 bits (248), Expect(4) = 1e-047
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = +2 / +3
Query: 293 DGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLI 472
+GGWC P RPHFD++ P + HI Y AG+VPV Y++V C ++GGVRF++ G +YF LV I
Sbjct: 435 NGGWCGPGRPHFDMSQPAWEHIGIYSAGVVPVLYQQVKCSRTGGVRFSLAGSQYFLLVNI 614
Query: 473 TNVAGAGDVVRASVKAASTGWLPM 544
N+ G+G V A VK TGW+ M
Sbjct: 615 QNLGGSGSVGAAWVKGDKTGWIQM 686
Score = 69.3 bits (145), Expect(4) = 2e-023
Identities = 36/84 (42%), Positives = 42/84 (50%)
Frame = -1 / -1
Query: 546 DMGSHPVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPAR 367
D+ HPVL+ T A T P P F + T KY +P + RTPP H T TGT PA
Sbjct: 688 DIWIHPVLSPFTHAAPTEPLPPRFWMLTSRKYWEPARLKRTPPVREHLTCWYRTGTTPAL 509
Query: 366 YSAMWRNMGMARSKCGRGGLHQPP 295
M + G SK GR G H PP
Sbjct: 508 *MPMCSHAGCDMSKWGRPGPHHPP 437
Score = 48.7 bits (100), Expect(4) = 1e-047
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2 / +3
Query: 110 GYGVNNAALSTALFDEGLRCGACFEIRCE 196
GYGVNNAAL LF++G CG C+ I C+
Sbjct: 258 GYGVNNAALGPTLFNDGASCGQCYLITCD 344
Score = 47.3 bits (97), Expect(4) = 1e-047
Identities = 19/26 (73%), Positives = 19/26 (73%)
Frame = +1 / +3
Query: 34 ATFYGGSDAFGFMGGACGYGNL*QPG 111
ATFYGG DA G MGGACGY NL G
Sbjct: 183 ATFYGGVDASGTMGGACGYDNLYNAG 260
Score = 42.3 bits (86), Expect(4) = 2e-023
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -2 / -1
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVA 33
P +RL YP APPI P AS PP* VA
Sbjct: 259 PALYRLSYPHAPPIVPDASTPP*KVA 182
Score = 35.4 bits (71), Expect(4) = 1e-047
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / +3
Query: 236 SILVTATNFCPPNYALPS 289
SI V+ATN CP NYALP+
Sbjct: 384 SITVSATNLCPSNYALPN 437
Score = 29.5 bits (58), Expect(4) = 2e-023
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -2
Query: 134 APRCSRRTPGC 102
APRCSRRTP C
Sbjct: 282 APRCSRRTPRC 250
Score = 24.4 bits (47), Expect(4) = 2e-023
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1 / -1
Query: 285 GSA*LGGQKLVAVTRME 235
GSA*L G +LVA T ME
Sbjct: 433 GSA*LDGHRLVADTVME 383
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,048,120,065
Number of Sequences: 832831
Number of extensions: 15705730
Number of successful extensions: 175176
Number of sequences better than 1.0e-020: 203
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 34450408492
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)