TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4424526.2.1
(1446 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX611172.1|CX611172 ANR1_23_C03.b1_A002 Anaerobic roots ... 358 9e-098
gb|CX608425.1|CX608425 ANR1_38_C03.g1_A002 Anaerobic roots ... 353 4e-096
gb|CW241116.1|CW241116 104_700_11218590_148_37543_029 Sorgh... 242 2e-094
gb|BG356912.1|BG356912 OV2_11_E10.g1_A002 Ovary 2 (OV2) Sor... 344 2e-093
gb|CN137974.1|CN137974 OX1_61_A09.b1_A002 Oxidatively-stres... 277 3e-091
gb|CD231921.1|CD231921 SS1_30_E07.g1_A012 Salt-stressed see... 325 1e-087
gb|CW229208.1|CW229208 104_670_11207182_116_37262_089 Sorgh... 322 7e-087
gb|CX608344.1|CX608344 ANR1_38_C03.b1_A002 Anaerobic roots ... 297 2e-079
gb|BG054078.1|BG054078 OV2_3_B08.g1_A002 Ovary 2 (OV2) Sorg... 295 1e-078
gb|BG357242.1|BG357242 OV2_11_E10.b1_A002 Ovary 2 (OV2) Sor... 282 1e-074
gb|CW032781.1|CW032781 104_262_10501588_114_30361 Sorghum m... 222 3e-066
gb|BF317701.1|BF317701 OV1_12_C03.g1_A002 Ovary 1 (OV1) Sor... 252 9e-066
gb|BG356656.1|BG356656 OV2_26_B11.g1_A002 Ovary 2 (OV2) Sor... 250 3e-065
gb|CW318975.1|CW318975 104_811_11474241_148_35884_041 Sorgh... 137 6e-064
gb|CW232475.1|CW232475 104_685_11212837_116_37365_061 Sorgh... 225 7e-064
gb|CW494632.1|CW494632 fsbb001f286a08f0 Sorghum methylation... 225 7e-064
gb|CW235239.1|CW235239 104_690_11214876_116_37408_040 Sorgh... 225 7e-064
gb|CW279063.1|CW279063 104_753_11406880_148_35430_052 Sorgh... 225 7e-064
gb|CN137170.1|CN137170 OX1_55_C12.g1_A002 Oxidatively-stres... 138 3e-063
gb|CN135696.1|CN135696 OX1_38_A08.g1_A002 Oxidatively-stres... 130 5e-060
gb|CN130191.1|CN130191 RHOH1_39_H05.g1_A002 Acid- and alkal... 126 3e-058
gb|CW030845.1|CW030845 104_259_10500460_114_30397 Sorghum m... 222 8e-057
gb|CW084941.1|CW084941 104_428_10946101_114_32560_063 Sorgh... 222 8e-057
gb|BF317700.1|BF317700 OV1_12_C02.g1_A002 Ovary 1 (OV1) Sor... 125 7e-054
gb|CW175026.1|CW175026 104_587_11157718_116_36569_089 Sorgh... 116 6e-052
gb|CW232476.1|CW232476 104_685_11212837_148_37366_061 Sorgh... 149 9e-050
gb|BF420874.1|BF420874 OV1_12_C02.b1_A002 Ovary 1 (OV1) Sor... 189 7e-047
gb|BG273478.1|BG273478 OV2_26_B11.b1_A002 Ovary 2 (OV2) Sor... 189 7e-047
gb|CD432670.1|CD432670 ETH1_25_A11.g1_A002 Ethylene-treated... 88 2e-046
gb|BE596684.1|BE596684 PI1_58_C12.b1_A002 Pathogen induced ... 92 2e-046
gb|BE596683.1|BE596683 PI1_58_C11.b1_A002 Pathogen induced ... 89 3e-045
gb|CW121610.1|CW121610 104_499_11109998_148_34658_053 Sorgh... 149 2e-044
gb|CW241115.1|CW241115 104_700_11218590_116_37544_029 Sorgh... 126 2e-043
gb|CN135617.1|CN135617 OX1_38_A08.b1_A002 Oxidatively-stres... 132 5e-042
gb|BE362745.1|BE362745 DG1_89_A06.b1_A002 Dark Grown 1 (DG1... 130 7e-042
gb|CW084108.1|CW084108 104_426_10945580_116_32441_070 Sorgh... 171 2e-041
gb|CW344474.1|CW344474 104_847_11487972_148_36203_046 Sorgh... 95 6e-037
gb|CN137086.1|CN137086 OX1_55_C12.b1_A002 Oxidatively-stres... 145 7e-037
gb|CW084107.1|CW084107 104_426_10945580_114_32377_070 Sorgh... 149 1e-034
gb|CN150914.1|CN150914 WOUND1_72_F06.b1_A002 Wounded leaves... 132 1e-034
gb|BE362389.1|BE362389 DG1_86_G06.b1_A002 Dark Grown 1 (DG1... 90 2e-034
gb|CD425348.1|CD425348 SA1_11_G07.g1_A002 Salicylic acid-tr... 90 4e-034
gb|CW344473.1|CW344473 104_847_11487972_116_36204_046 Sorgh... 85 5e-034
gb|CW034107.1|CW034107 104_264_10502356_114_30358 Sorghum m... 121 1e-033
gb|BE356707.1|BE356707 DG1_12_E08.b1_A002 Dark Grown 1 (DG1... 90 2e-033
gb|BE593932.1|BE593932 WS1_104_B07.g1_A002 Water-stressed 1... 128 2e-033
gb|BM318563.1|BM318563 PI1_15_A07.b9_A002 Pathogen induced ... 90 1e-032
gb|BE596607.1|BE596607 PI1_58_C12.g1_A002 Pathogen induced ... 126 1e-032
gb|BE596606.1|BE596606 PI1_58_C11.g1_A002 Pathogen induced ... 126 1e-032
gb|CW121609.1|CW121609 104_499_11109998_116_34662_053 Sorgh... 142 1e-032
gb|CD429828.1|CD429828 ETH1_15_D02.g1_A002 Ethylene-treated... 90 3e-032
gb|BE594253.1|BE594253 WS1_104_B07.b1_A002 Water-stressed 1... 83 9e-032
gb|CW235240.1|CW235240 104_690_11214876_148_37412_040 Sorgh... 137 5e-031
gb|BE362444.1|BE362444 DG1_86_G06.g1_A002 Dark Grown 1 (DG1... 124 7e-029
gb|AW671476.1|AW671476 LG1_347_C07.b1_A002 Light Grown 1 (L... 108 1e-028
gb|BE362808.1|BE362808 DG1_89_A06.g2_A002 Dark Grown 1 (DG1... 111 2e-028
gb|CD429697.1|CD429697 ETH1_15_D02.b1_A002 Ethylene-treated... 111 3e-028
gb|CD432656.1|CD432656 ETH1_25_A11.b1_A002 Ethylene-treated... 110 5e-028
gb|CF758066.1|CF758066 DSAF1_26_H02.g1_A011 Drought-stresse... 110 5e-028
gb|CW279062.1|CW279062 104_753_11406880_116_35426_052 Sorgh... 122 1e-026
gb|BM326480.1|BM326480 PIC1_57_E11.b1_A002 Pathogen-infecte... 90 1e-026
gb|BM330867.1|BM330867 PIC1_57_E11.g1_A002 Pathogen-infecte... 104 3e-026
gb|BE364608.2|BE364608 PI1_15_A07.g1_A002 Pathogen induced ... 104 3e-026
gb|BE356802.1|BE356802 DG1_12_E08.g1_A002 Dark Grown 1 (DG1... 111 2e-023
gb|BZ627716.1|BZ627716 ih54e08.b1 WGS-SbicolorF (DH5a methy... 110 7e-023
gb|CX608544.1|CX608544 ANR1_39_E12.b1_A002 Anaerobic roots ... 60 5e-022
gb|CN150991.1|CN150991 WOUND1_72_F06.g1_A002 Wounded leaves... 90 9e-022
gb|CW411646.1|CW411646 fsbb001f106o16k0 Sorghum methylation... 106 9e-022
>gb|CX611172.1|CX611172 ANR1_23_C03.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_23_C03_A002 3', mRNA sequence
Length = 701
Score = 358 bits (777), Expect = 9e-098
Identities = 151/174 (86%), Positives = 159/174 (91%)
Frame = -1 / +3
Query: 966 YAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAVFVEEGDIATYTVLAADDPRAE 787
YA+AG+FAG+ LP VGQ+LAPGPP DKAVVLGDGDTK VFVEEGDI TYTVLAADDPRAE
Sbjct: 3 YALAGYFAGYALPNVGQLLAPGPPTDKAVVLGDGDTKVVFVEEGDIGTYTVLAADDPRAE 182
Query: 786 NKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQIQESPIPLNIILAIGHA 607
NK LYIKPPANTLSHNELLSLWEKKTGKTF+REYVPEEAVLKQIQESPIPLNIILAIGHA
Sbjct: 183 NKTLYIKPPANTLSHNELLSLWEKKTGKTFQREYVPEEAVLKQIQESPIPLNIILAIGHA 362
Query: 606 AFVRGEQTGFEIDPAKGVDASELYPDVKYTTVDEYLNRFL*A*GLNKQDVTYGR 445
A+VRGEQTGFEIDPAK VDA+ELYPDVKYTTVDEYLNRFL*+ DV GR
Sbjct: 363 AYVRGEQTGFEIDPAKRVDATELYPDVKYTTVDEYLNRFL*SLKKQDDDV*CGR 524
Score = 283 bits (613), Expect = 4e-075
Identities = 127/170 (74%), Positives = 133/170 (78%)
Frame = +2 / -2
Query: 422 TSTHHGRARPYVTSCLLRPQAQRKRLRYSSTVVYLTSGYSSLASTPLAGSISKPVCSPRT 601
T++ RP+ TS + QRKR RYSSTVVYLTSGYSS+AST LAGSISKPVCSPRT
Sbjct: 547 TNSSSRLGRPHHTSSSCFFRLQRKRFRYSSTVVYLTSGYSSVASTLLAGSISKPVCSPRT 368
Query: 602 NAACPIARMMFRGIGDSWICLSTASSGTYSRRNVLPXXXXXXXXXXXXXXXXAGGLMYST 781
AACPIARMMF GIGDSWICLSTASSGTYSR NVLP AGGLMYS
Sbjct: 367 YAACPIARMMFSGIGDSWICLSTASSGTYSRWNVLPVFFSHSDSSSLCDSVLAGGLMYSV 188
Query: 782 LFSARGSSAASTVYVAMSPSSTNTALVSPSPRTTALSAGGPGARTCPTLG 931
LFSARGSSAASTVYV MSPSSTNT LVSPSPRTTALS GGPGAR+CPTLG
Sbjct: 187 LFSARGSSAASTVYVPMSPSSTNTTLVSPSPRTTALSVGGPGARSCPTLG 38
Score = 95.0 bits (201), Expect(2) = 3e-028
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -3 / +2
Query: 712 DRQDVPAGVRAGGSRAQADPRVADPSEHHPGDRARGVRAWGA 587
DRQDVPAGVRA GSRAQADPRVADP+EHHPGDRARGVRA GA
Sbjct: 257 DRQDVPAGVRA*GSRAQADPRVADPAEHHPGDRARGVRAGGA 382
Score = 89.5 bits (189), Expect(4) = 4e-050
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +1 / -1
Query: 781 LVLRARVVGRQHRVRGDVALLHEHRLGVAVAEDDRLVRGRAGGEDLPDL 927
LVL ARVVG QHRVR DV LLHEH LGVAVAED RLVRGRAG ++LPD+
Sbjct: 188 LVLGARVVGGQHRVRPDVPLLHEHHLGVAVAEDHRLVRGRAGRQELPDV 42
Score = 81.3 bits (171), Expect(4) = 4e-050
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +1 / -1
Query: 484 SEKAVEVLVDGGVLDIRVQFAGVHPLGRVDLEARLLPTH 600
SE+AV+VLVDGGVLD+RVQ GVHPLGRVDLEARLLP H
Sbjct: 485 SEEAVQVLVDGGVLDVRVQLGGVHPLGRVDLEARLLPPH 369
Score = 52.8 bits (109), Expect(2) = 3e-028
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -2 / +1
Query: 593 GSRRASRSTRPRGWTPANCTRMXXXXXXXXXXTAFSE 483
GSRRASRSTRPRGWTP +CTR TA SE
Sbjct: 376 GSRRASRSTRPRGWTPPSCTRTSSTPPSTST*TASSE 486
Score = 47.8 bits (98), Expect(4) = 4e-050
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +3 / -3
Query: 597 ARTPRARSPG*CSEGSATLGS 659
ARTPRARSPG*CS GSATLGS
Sbjct: 372 ARTPRARSPG*CSAGSATLGS 310
Score = 38.6 bits (78), Expect(4) = 4e-050
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / -1
Query: 664 EHGFLRHVLPPERLAG 711
EHGFLRHVLP ERLAG
Sbjct: 305 EHGFLRHVLPLERLAG 258
>gb|CX608425.1|CX608425 ANR1_38_C03.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_38_C03_A002 5', mRNA sequence
Length = 582
Score = 353 bits (765), Expect = 4e-096
Identities = 153/169 (90%), Positives = 162/169 (95%)
Frame = -1 / +1
Query: 1416 *MASEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVT 1237
*MASEKSKILVVGGTGYLGRHVVAASARLGHPT ALVRDTAPSDPAKAALL+SFQDAGVT
Sbjct: 76 *MASEKSKILVVGGTGYLGRHVVAASARLGHPTVALVRDTAPSDPAKAALLQSFQDAGVT 255
Query: 1236 LLKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVD 1057
L+KGDLYDQASLVSAVKGADVVIS LGS+QIADQ+RL+DAIKEAGNVKRFFPSEFGLDVD
Sbjct: 256 LVKGDLYDQASLVSAVKGADVVISTLGSLQIADQTRLIDAIKEAGNVKRFFPSEFGLDVD 435
Query: 1056 RTGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVL 910
RTGIVEP KSIL KVGIRRATEAAGIPYTYA+AG+FAG+ LP VGQ+L
Sbjct: 436 RTGIVEPGKSILAGKVGIRRATEAAGIPYTYALAGYFAGYALPNVGQLL 582
Score = 288 bits (623), Expect = 2e-076
Identities = 126/169 (74%), Positives = 130/169 (76%)
Frame = +2 / -2
Query: 911 RTCPTLGRXXXXXXXXXXXV*GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKN 1090
R+CPTLG V*GMPAASVARRMPTL R+DL GST+PVRSTSRPNSDGKN
Sbjct: 581 RSCPTLGSAYPAK*PARAYV*GMPAASVARRMPTLPARIDLPGSTIPVRSTSRPNSDGKN 402
Query: 1091 LLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXX 1270
LLT PASLMAS SR+WSAIC DPS EMTTSAPFTALTRLAWS RSPL SVTPASWK
Sbjct: 401 LLTLPASLMASMSRVWSAICSDPSVEMTTSAPFTALTRLAWS*RSPLTSVTPASWKLWSS 222
Query: 1271 XXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYPVPPTTRILLFSDAIY 1417
TSA VGWPSRALAATTC PRYPVPPTTRILLFSDAIY
Sbjct: 221 AALAGSEGAVSLTSATVGWPSRALAATTCRPRYPVPPTTRILLFSDAIY 75
Score = 143 bits (307), Expect(2) = 9e-050
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = +1 / -1
Query: 1051 RAVHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVAL 1230
RAVHVQAELRREEPLDV+GLLDGVDEP LVGDL R E GDDHV ALH A +ASLVV+VAL
Sbjct: 441 RAVHVQAELRREEPLDVAGLLDGVDEPGLVGDLQRPERGDDHVGALHGADKASLVVEVAL 262
Query: 1231 EERHAGVLEALEQ 1269
+ERHAGVLEALEQ
Sbjct: 261 DERHAGVLEALEQ 223
Score = 76.2 bits (160), Expect(2) = 9e-050
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1 / -1
Query: 1327 AQPRARRHDVPAQVPRAADHQDLALLRRHLS 1419
AQPRARRHDVPAQVPRAADHQDLALLRRHLS
Sbjct: 165 AQPRARRHDVPAQVPRAADHQDLALLRRHLS 73
Score = 62.0 bits (129), Expect(5) = 2e-027
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -3 / +3
Query: 1321 HLGARQGHGAVRPGQSGAAQELPGRRRDAPQ 1229
H ARQGHGA+RPGQ GAA ELPGRRRDA Q
Sbjct: 171 HRRARQGHGALRPGQGGAAPELPGRRRDARQ 263
Score = 46.0 bits (94), Expect(5) = 2e-027
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -3 / +3
Query: 1417 IDGVGEEQDPGGRRHGV 1367
IDGVGEEQDPGGRRHGV
Sbjct: 75 IDGVGEEQDPGGRRHGV 125
Score = 33.1 bits (66), Expect(5) = 2e-027
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2 / +2
Query: 1175 WSSPCSDRCRSPTR 1134
WSSP S RCRSPTR
Sbjct: 317 WSSPRSGRCRSPTR 358
Score = 28.1 bits (55), Expect(5) = 2e-027
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / +2
Query: 1352 SWRRARGWA 1326
SWRRARGWA
Sbjct: 140 SWRRARGWA 166
Score = 27.6 bits (54), Expect(5) = 2e-027
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / +3
Query: 1117 HQGGRKRQEVL 1085
HQGGR+RQEVL
Sbjct: 375 HQGGRQRQEVL 407
>gb|CW241116.1|CW241116 104_700_11218590_148_37543_029 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218590, DNA
sequence
Length = 600
Score = 242 bits (522), Expect(2) = 2e-094
Identities = 98/109 (89%), Positives = 103/109 (94%)
Frame = -1 / +2
Query: 978 IPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAVFVEEGDIATYTVLAADD 799
IPYTYA+AG+FAG+ LP VGQ+LAPGPP DKAVVLGDGDTK VFVEEGDI TYTVLAADD
Sbjct: 2 IPYTYALAGYFAGYALPNVGQLLAPGPPTDKAVVLGDGDTKVVFVEEGDIGTYTVLAADD 181
Query: 798 PRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQIQ 652
PRAENK LYIKPPANTLSHNELLSLWEKKTGKTF+REYVPEEAVLKQIQ
Sbjct: 182 PRAENKTLYIKPPANTLSHNELLSLWEKKTGKTFQREYVPEEAVLKQIQ 328
Score = 164 bits (353), Expect(2) = 8e-069
Identities = 75/109 (68%), Positives = 76/109 (69%)
Frame = +2 / -1
Query: 653 WICLSTASSGTYSRRNVLPXXXXXXXXXXXXXXXXAGGLMYSTLFSARGSSAASTVYVAM 832
WICLSTASSGTYSR NVLP AGGLMYS LFSARGSSAASTVYV M
Sbjct: 327 WICLSTASSGTYSRWNVLPVFFSHSDSSSLCDSVLAGGLMYSVLFSARGSSAASTVYVPM 148
Query: 833 SPSSTNTALVSPSPRTTALSAGGPGARTCPTLGRXXXXXXXXXXXV*GM 979
SPSSTNT LVSPSPRTTALS GGPGAR+CPTLG V*GM
Sbjct: 147 SPSSTNTTLVSPSPRTTALSVGGPGARSCPTLGSAYPAK*PARAYV*GM 1
Score = 127 bits (271), Expect(2) = 2e-094
Identities = 53/56 (94%), Positives = 55/56 (98%)
Frame = -1 / +3
Query: 651 ESPIPLNIILAIGHAAFVRGEQTGFEIDPAKGVDASELYPDVKYTTVDEYLNRFL* 484
ESPIPLNIILAIGHAA+VRGEQTGFEIDPAK VDA+ELYPDVKYTTVDEYLNRFL*
Sbjct: 432 ESPIPLNIILAIGHAAYVRGEQTGFEIDPAKRVDATELYPDVKYTTVDEYLNRFL* 599
Score = 118 bits (253), Expect(2) = 8e-069
Identities = 51/56 (91%), Positives = 52/56 (92%)
Frame = +2 / -3
Query: 485 QRKRLRYSSTVVYLTSGYSSLASTPLAGSISKPVCSPRTNAACPIARMMFRGIGDS 652
QRKR RYSSTVVYLTSGYSS+AST LAGSISKPVCSPRT AACPIARMMF GIGDS
Sbjct: 598 QRKRFRYSSTVVYLTSGYSSVASTLLAGSISKPVCSPRTYAACPIARMMFSGIGDS 431
Score = 89.5 bits (189), Expect(4) = 1e-048
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +1 / -3
Query: 781 LVLRARVVGRQHRVRGDVALLHEHRLGVAVAEDDRLVRGRAGGEDLPDL 927
LVL ARVVG QHRVR DV LLHEH LGVAVAED RLVRGRAG ++LPD+
Sbjct: 199 LVLGARVVGGQHRVRPDVPLLHEHHLGVAVAEDHRLVRGRAGRQELPDV 53
Score = 81.3 bits (171), Expect(4) = 1e-048
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +1 / -2
Query: 484 SEKAVEVLVDGGVLDIRVQFAGVHPLGRVDLEARLLPTH 600
SE+AV+VLVDGGVLD+RVQ GVHPLGRVDLEARLLP H
Sbjct: 599 SEEAVQVLVDGGVLDVRVQLGGVHPLGRVDLEARLLPPH 483
Score = 52.8 bits (109), Expect(3) = 9e-025
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -2 / +1
Query: 593 GSRRASRSTRPRGWTPANCTRMXXXXXXXXXXTAFSE 483
GSRRASRSTRPRGWTP +CTR TA SE
Sbjct: 490 GSRRASRSTRPRGWTPPSCTRTSSTPPSTST*TASSE 600
Score = 52.4 bits (108), Expect(3) = 9e-025
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -3 / +2
Query: 652 RVADPSEHHPGDRARGVRAWGA 587
RVADP+EHHPGDRARGVRA GA
Sbjct: 431 RVADPAEHHPGDRARGVRAGGA 496
Score = 48.3 bits (99), Expect(3) = 9e-025
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -3 / +1
Query: 712 DRQDVPAGVRAGGSRAQADPRV 647
DRQDVPAGVRA GSRAQADPR+
Sbjct: 268 DRQDVPAGVRA*GSRAQADPRL 333
Score = 43.2 bits (88), Expect(4) = 1e-048
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3 / -1
Query: 597 ARTPRARSPG*CSEGSATL 653
ARTPRARSPG*CS GSATL
Sbjct: 486 ARTPRARSPG*CSAGSATL 430
Score = 38.6 bits (78), Expect(4) = 1e-048
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / -3
Query: 664 EHGFLRHVLPPERLAG 711
EHGFLRHVLP ERLAG
Sbjct: 316 EHGFLRHVLPLERLAG 269
>gb|BG356912.1|BG356912 OV2_11_E10.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 647
Score = 344 bits (746), Expect = 2e-093
Identities = 146/167 (87%), Positives = 152/167 (91%)
Frame = -1 / +2
Query: 945 AGFGLPKVGQVLAPGPPADKAVVLGDGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIK 766
AG+ LP VGQ+LAPGPP DKAVVLGDGDTK VFVEEGDI TYTVLAADDPRAENK LYIK
Sbjct: 2 AGYALPNVGQLLAPGPPTDKAVVLGDGDTKVVFVEEGDIGTYTVLAADDPRAENKTLYIK 181
Query: 765 PPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQIQESPIPLNIILAIGHAAFVRGEQ 586
PPANTLSHNELLSLWEKKTGKTF+REYVPEEAVLKQIQESPIPLNIILAIGHAA+VRGEQ
Sbjct: 182 PPANTLSHNELLSLWEKKTGKTFQREYVPEEAVLKQIQESPIPLNIILAIGHAAYVRGEQ 361
Query: 585 TGFEIDPAKGVDASELYPDVKYTTVDEYLNRFL*A*GLNKQDVTYGR 445
TGFEIDPAK VDA+ELYPDVKYTTVDEYLNRFL*+ DV GR
Sbjct: 362 TGFEIDPAKRVDATELYPDVKYTTVDEYLNRFL*SLKKQDDDV*CGR 502
Score = 283 bits (613), Expect = 4e-075
Identities = 127/170 (74%), Positives = 133/170 (78%)
Frame = +2 / -3
Query: 422 TSTHHGRARPYVTSCLLRPQAQRKRLRYSSTVVYLTSGYSSLASTPLAGSISKPVCSPRT 601
T++ RP+ TS + QRKR RYSSTVVYLTSGYSS+AST LAGSISKPVCSPRT
Sbjct: 525 TNSSSRLGRPHHTSSSCFFRLQRKRFRYSSTVVYLTSGYSSVASTLLAGSISKPVCSPRT 346
Query: 602 NAACPIARMMFRGIGDSWICLSTASSGTYSRRNVLPXXXXXXXXXXXXXXXXAGGLMYST 781
AACPIARMMF GIGDSWICLSTASSGTYSR NVLP AGGLMYS
Sbjct: 345 YAACPIARMMFSGIGDSWICLSTASSGTYSRWNVLPVFFSHSDSSSLCDSVLAGGLMYSV 166
Query: 782 LFSARGSSAASTVYVAMSPSSTNTALVSPSPRTTALSAGGPGARTCPTLG 931
LFSARGSSAASTVYV MSPSSTNT LVSPSPRTTALS GGPGAR+CPTLG
Sbjct: 165 LFSARGSSAASTVYVPMSPSSTNTTLVSPSPRTTALSVGGPGARSCPTLG 16
Score = 95.0 bits (201), Expect(2) = 3e-028
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -3 / +1
Query: 712 DRQDVPAGVRAGGSRAQADPRVADPSEHHPGDRARGVRAWGA 587
DRQDVPAGVRA GSRAQADPRVADP+EHHPGDRARGVRA GA
Sbjct: 235 DRQDVPAGVRA*GSRAQADPRVADPAEHHPGDRARGVRAGGA 360
Score = 89.5 bits (189), Expect(4) = 4e-050
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +1 / -2
Query: 781 LVLRARVVGRQHRVRGDVALLHEHRLGVAVAEDDRLVRGRAGGEDLPDL 927
LVL ARVVG QHRVR DV LLHEH LGVAVAED RLVRGRAG ++LPD+
Sbjct: 166 LVLGARVVGGQHRVRPDVPLLHEHHLGVAVAEDHRLVRGRAGRQELPDV 20
Score = 81.3 bits (171), Expect(4) = 4e-050
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +1 / -2
Query: 484 SEKAVEVLVDGGVLDIRVQFAGVHPLGRVDLEARLLPTH 600
SE+AV+VLVDGGVLD+RVQ GVHPLGRVDLEARLLP H
Sbjct: 463 SEEAVQVLVDGGVLDVRVQLGGVHPLGRVDLEARLLPPH 347
Score = 52.8 bits (109), Expect(2) = 3e-028
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -2 / +3
Query: 593 GSRRASRSTRPRGWTPANCTRMXXXXXXXXXXTAFSE 483
GSRRASRSTRPRGWTP +CTR TA SE
Sbjct: 354 GSRRASRSTRPRGWTPPSCTRTSSTPPSTST*TASSE 464
Score = 47.8 bits (98), Expect(4) = 4e-050
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +3 / -1
Query: 597 ARTPRARSPG*CSEGSATLGS 659
ARTPRARSPG*CS GSATLGS
Sbjct: 350 ARTPRARSPG*CSAGSATLGS 288
Score = 38.6 bits (78), Expect(4) = 4e-050
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / -2
Query: 664 EHGFLRHVLPPERLAG 711
EHGFLRHVLP ERLAG
Sbjct: 283 EHGFLRHVLPLERLAG 236
>gb|CN137974.1|CN137974 OX1_61_A09.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_61_A09_A002 3', mRNA sequence
Length = 703
Score = 277 bits (599), Expect(2) = 3e-091
Identities = 114/128 (89%), Positives = 119/128 (92%)
Frame = -1 / +1
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGD 862
EP KSIL KVGIRRATEAAGIPYTYA+AG+FAG+ LP VGQ+LAPGPP DKAVVLGDGD
Sbjct: 1 EPGKSILAGKVGIRRATEAAGIPYTYALAGYFAGYALPNVGQLLAPGPPTDKAVVLGDGD 180
Query: 861 TKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYV 682
TK VFVEEGDI TYTVLAADDPRAENK LYIKPPANTLSHNELLSLWEKKTGKTF+REYV
Sbjct: 181 TKVVFVEEGDIGTYTVLAADDPRAENKTLYIKPPANTLSHNELLSLWEKKTGKTFQREYV 360
Query: 681 PEEAVLKQ 658
PEEAVLKQ
Sbjct: 361 PEEAVLKQ 384
Score = 196 bits (422), Expect(2) = 1e-052
Identities = 92/147 (62%), Positives = 98/147 (66%)
Frame = +2 / -3
Query: 599 TNAACPIARMMFRGIGDSWICLSTASSGTYSRRNVLPXXXXXXXXXXXXXXXXAGGLMYS 778
T+ +A + G +CLSTASSGTYSR NVLP AGGLMYS
Sbjct: 443 TSGYSSVASTLLAGSISKPVCLSTASSGTYSRWNVLPVFFSHSDSSSLCDSVLAGGLMYS 264
Query: 779 TLFSARGSSAASTVYVAMSPSSTNTALVSPSPRTTALSAGGPGARTCPTLGRXXXXXXXX 958
LFSARGSSAASTVYV MSPSSTNT LVSPSPRTTALS GGPGAR+CPTLG
Sbjct: 263 VLFSARGSSAASTVYVPMSPSSTNTTLVSPSPRTTALSVGGPGARSCPTLGSAYPAK*PA 84
Query: 959 XXXV*GMPAASVARRMPTLAPRMDLAG 1039
V*GMPAASVARRMPTL R+DL G
Sbjct: 83 RAYV*GMPAASVARRMPTLPARIDLPG 3
Score = 89.5 bits (189), Expect(3) = 1e-039
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +1 / -2
Query: 781 LVLRARVVGRQHRVRGDVALLHEHRLGVAVAEDDRLVRGRAGGEDLPDL 927
LVL ARVVG QHRVR DV LLHEH LGVAVAED RLVRGRAG ++LPD+
Sbjct: 261 LVLGARVVGGQHRVRPDVPLLHEHHLGVAVAEDHRLVRGRAGRQELPDV 115
Score = 81.3 bits (171), Expect(2) = 3e-091
Identities = 36/49 (73%), Positives = 39/49 (79%)
Frame = -1 / +1
Query: 591 EQTGFEIDPAKGVDASELYPDVKYTTVDEYLNRFL*A*GLNKQDVTYGR 445
+QTGFEIDPAK VDA+ELYPDVKYT VDEYLNRFL*+ DV GR
Sbjct: 379 KQTGFEIDPAKRVDATELYPDVKYTPVDEYLNRFL*SLKKQDDDV*CGR 525
Score = 75.8 bits (159), Expect(3) = 1e-039
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = +2 / -3
Query: 422 TSTHHGRARPYVTSCLLRPQAQRKRLRYSSTVVYLTSGYSSLASTPLAGSISKPVC 589
T++ RP+ TS + QRKR RYSST VYLTSGYSS+AST LAGSISKPVC
Sbjct: 548 TNSSSRLGRPHHTSSSCFFRLQRKRFRYSSTGVYLTSGYSSVASTLLAGSISKPVC 381
Score = 38.6 bits (78), Expect(3) = 1e-039
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / -2
Query: 664 EHGFLRHVLPPERLAG 711
EHGFLRHVLP ERLAG
Sbjct: 378 EHGFLRHVLPLERLAG 331
Score = 33.1 bits (66), Expect(2) = 1e-052
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +3 / -1
Query: 486 RESG*GTRRRWCT*HPGT 539
R SG GTRRR CT* PGT
Sbjct: 484 RGSGSGTRRRGCT*RPGT 431
>gb|CD231921.1|CD231921 SS1_30_E07.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_30_E07_A012 5', mRNA sequence
Length = 570
Score = 325 bits (703), Expect = 1e-087
Identities = 139/154 (90%), Positives = 149/154 (96%)
Frame = -1 / +3
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
+++ILVVGGTGYLGRHVVAASARLGHPT ALVRDTAPSDPAKAALL+SFQDAGVTL+KGD
Sbjct: 108 RARILVVGGTGYLGRHVVAASARLGHPTVALVRDTAPSDPAKAALLQSFQDAGVTLVKGD 287
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYDQASLVSAVKGADVVIS LGS+QIADQ+RL+DAIKEAGNVKRFFPSEFGLDVDRTGIV
Sbjct: 288 LYDQASLVSAVKGADVVISALGSLQIADQTRLIDAIKEAGNVKRFFPSEFGLDVDRTGIV 467
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAG 940
EP KSIL KVGIRRATEAAGIPYTYA+AG+FAG
Sbjct: 468 EPGKSILAGKVGIRRATEAAGIPYTYALAGYFAG 569
Score = 261 bits (564), Expect = 2e-068
Identities = 113/143 (79%), Positives = 116/143 (81%)
Frame = +2 / -3
Query: 968 V*GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAI 1147
V*GMPAASVARRMPTL R+DL GST+PVRSTSRPNSDGKNLLT PASLMAS SR+WSAI
Sbjct: 541 V*GMPAASVARRMPTLPARIDLPGSTIPVRSTSRPNSDGKNLLTLPASLMASMSRVWSAI 362
Query: 1148 CIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGW 1327
C DPS EMTTSAPFTALTRLAWS RSPL SVTPASWK TSA VGW
Sbjct: 361 CSDPSAEMTTSAPFTALTRLAWS*RSPLTSVTPASWKLWSSAALAGSEGAVSLTSATVGW 182
Query: 1328 PSRALAATTCLPRYPVPPTTRIL 1396
PSRALAATTC PRYPVPPTTRIL
Sbjct: 181 PSRALAATTCRPRYPVPPTTRIL 113
Score = 143 bits (307), Expect(2) = 5e-044
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = +1 / -2
Query: 1051 RAVHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVAL 1230
RAVHVQAELRREEPLDV+GLLDGVDEP LVGDL R E GDDHV ALH A +ASLVV+VAL
Sbjct: 458 RAVHVQAELRREEPLDVAGLLDGVDEPGLVGDLQRPERGDDHVGALHGADKASLVVEVAL 279
Query: 1231 EERHAGVLEALEQ 1269
+ERHAGVLEALEQ
Sbjct: 278 DERHAGVLEALEQ 240
Score = 62.0 bits (129), Expect(5) = 1e-021
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -3 / +2
Query: 1321 HLGARQGHGAVRPGQSGAAQELPGRRRDAPQ 1229
H ARQGHGA+RPGQ GAA ELPGRRRDA Q
Sbjct: 188 HRRARQGHGALRPGQGGAAPELPGRRRDARQ 280
Score = 57.0 bits (118), Expect(2) = 5e-044
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +1 / -2
Query: 1327 AQPRARRHDVPAQVPRAADHQD 1392
AQPRARRHDVPAQVPRAADHQD
Sbjct: 182 AQPRARRHDVPAQVPRAADHQD 117
Score = 33.1 bits (66), Expect(5) = 1e-021
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2 / +1
Query: 1175 WSSPCSDRCRSPTR 1134
WSSP S RCRSPTR
Sbjct: 334 WSSPRSGRCRSPTR 375
Score = 28.1 bits (55), Expect(5) = 1e-021
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / +1
Query: 1352 SWRRARGWA 1326
SWRRARGWA
Sbjct: 157 SWRRARGWA 183
Score = 27.6 bits (54), Expect(5) = 1e-021
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / +2
Query: 1117 HQGGRKRQEVL 1085
HQGGR+RQEVL
Sbjct: 392 HQGGRQRQEVL 424
Score = 25.8 bits (50), Expect(5) = 1e-021
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -3 / +2
Query: 1402 EEQDPGGRRHGV 1367
+ ++PGGRRHGV
Sbjct: 107 KSKNPGGRRHGV 142
>gb|CW229208.1|CW229208 104_670_11207182_116_37262_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11207182, DNA
sequence
Length = 564
Score = 322 bits (698), Expect = 7e-087
Identities = 133/149 (89%), Positives = 140/149 (93%)
Frame = -1 / +1
Query: 1098 VKRFFPSEFGLDVDRTGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVG 919
++RFFPSEFGLDVDRTGIVEP KSIL KVGIRRATEAAGIPYTYA+AG+FAG+ LP VG
Sbjct: 10 MQRFFPSEFGLDVDRTGIVEPGKSILAGKVGIRRATEAAGIPYTYALAGYFAGYALPNVG 189
Query: 918 QVLAPGPPADKAVVLGDGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHN 739
Q+LAPGPP DKAVVLGDGDTK VFVEEGDI TYTVLAADDPRAENK LYIKPPANTLSHN
Sbjct: 190 QLLAPGPPTDKAVVLGDGDTKVVFVEEGDIRTYTVLAADDPRAENKTLYIKPPANTLSHN 369
Query: 738 ELLSLWEKKTGKTFRREYVPEEAVLKQIQ 652
ELLSLWEKKTGKTF+REYVPEEAVLKQIQ
Sbjct: 370 ELLSLWEKKTGKTFQREYVPEEAVLKQIQ 456
Score = 240 bits (518), Expect = 5e-062
Identities = 108/147 (73%), Positives = 111/147 (75%)
Frame = +2 / -2
Query: 653 WICLSTASSGTYSRRNVLPXXXXXXXXXXXXXXXXAGGLMYSTLFSARGSSAASTVYVAM 832
WICLSTASSGTYSR NVLP AGGLMYS LFSARGSSAASTVYV M
Sbjct: 455 WICLSTASSGTYSRWNVLPVFFSHSDSSSLCDSVLAGGLMYSVLFSARGSSAASTVYVLM 276
Query: 833 SPSSTNTALVSPSPRTTALSAGGPGARTCPTLGRXXXXXXXXXXXV*GMPAASVARRMPT 1012
SPSSTNT LVSPSPRTTALS GGPGAR+CPTLG V*GMPAASVARRMPT
Sbjct: 275 SPSSTNTTLVSPSPRTTALSVGGPGARSCPTLGSAYPAK*PARAYV*GMPAASVARRMPT 96
Query: 1013 LAPRMDLAGSTMPVRSTSRPNSDGKNL 1093
L R+DL GST+PVRSTSRPNSDGKNL
Sbjct: 95 LPARIDLPGSTIPVRSTSRPNSDGKNL 15
Score = 85.8 bits (181), Expect(3) = 5e-027
Identities = 38/49 (77%), Positives = 41/49 (83%)
Frame = +1 / -1
Query: 781 LVLRARVVGRQHRVRGDVALLHEHRLGVAVAEDDRLVRGRAGGEDLPDL 927
LVL ARVVG QHRV DV LLHEH LGVAVAED RLVRGRAG ++LPD+
Sbjct: 327 LVLGARVVGGQHRVCPDVPLLHEHHLGVAVAEDHRLVRGRAGRQELPDV 181
Score = 38.6 bits (78), Expect(3) = 5e-027
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / -1
Query: 664 EHGFLRHVLPPERLAG 711
EHGFLRHVLP ERLAG
Sbjct: 444 EHGFLRHVLPLERLAG 397
Score = 36.8 bits (74), Expect(3) = 5e-027
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1 / -1
Query: 1051 RAVHVQAELRREEPL 1095
RAVHVQAELRREEPL
Sbjct: 57 RAVHVQAELRREEPL 13
>gb|CX608344.1|CX608344 ANR1_38_C03.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_38_C03_A002 3', mRNA sequence
Length = 605
Score = 297 bits (644), Expect = 2e-079
Identities = 127/143 (88%), Positives = 131/143 (91%)
Frame = -1 / +2
Query: 873 GDGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFR 694
GDGDTK VFVEEGDI TYTVLAADDPRAENK LYIKPPANTLSHNELLSLWEKKTGKTF+
Sbjct: 2 GDGDTKVVFVEEGDIGTYTVLAADDPRAENKTLYIKPPANTLSHNELLSLWEKKTGKTFQ 181
Query: 693 REYVPEEAVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEIDPAKGVDASELYPDVKYTT 514
REYVPEEAVLKQIQESPIPLNIILAIGHAA+VRGEQTGFEIDPAK VDA+ELYPDVKYTT
Sbjct: 182 REYVPEEAVLKQIQESPIPLNIILAIGHAAYVRGEQTGFEIDPAKRVDATELYPDVKYTT 361
Query: 513 VDEYLNRFL*A*GLNKQDVTYGR 445
VDEYLNRFL*+ DV GR
Sbjct: 362 VDEYLNRFL*SLKKQDDDV*CGR 430
Score = 241 bits (520), Expect = 3e-062
Identities = 110/151 (72%), Positives = 115/151 (76%)
Frame = +2 / -3
Query: 422 TSTHHGRARPYVTSCLLRPQAQRKRLRYSSTVVYLTSGYSSLASTPLAGSISKPVCSPRT 601
T++ RP+ TS + QRKR RYSSTVVYLTSGYSS+AST LAGSISKPVCSPRT
Sbjct: 453 TNSSSRLGRPHHTSSSCFFRLQRKRFRYSSTVVYLTSGYSSVASTLLAGSISKPVCSPRT 274
Query: 602 NAACPIARMMFRGIGDSWICLSTASSGTYSRRNVLPXXXXXXXXXXXXXXXXAGGLMYST 781
AACPIARMMF GIGDSWICLSTASSGTYSR NVLP AGGLMYS
Sbjct: 273 YAACPIARMMFSGIGDSWICLSTASSGTYSRWNVLPVFFSHSDSSSLCDSVLAGGLMYSV 94
Query: 782 LFSARGSSAASTVYVAMSPSSTNTALVSPSP 874
LFSARGSSAASTVYV MSPSSTNT LVSPSP
Sbjct: 93 LFSARGSSAASTVYVPMSPSSTNTTLVSPSP 1
Score = 95.0 bits (201), Expect(2) = 3e-028
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -3 / +1
Query: 712 DRQDVPAGVRAGGSRAQADPRVADPSEHHPGDRARGVRAWGA 587
DRQDVPAGVRA GSRAQADPRVADP+EHHPGDRARGVRA GA
Sbjct: 163 DRQDVPAGVRA*GSRAQADPRVADPAEHHPGDRARGVRAGGA 288
Score = 81.3 bits (171), Expect(4) = 9e-041
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +1 / -2
Query: 484 SEKAVEVLVDGGVLDIRVQFAGVHPLGRVDLEARLLPTH 600
SE+AV+VLVDGGVLD+RVQ GVHPLGRVDLEARLLP H
Sbjct: 391 SEEAVQVLVDGGVLDVRVQLGGVHPLGRVDLEARLLPPH 275
Score = 57.9 bits (120), Expect(4) = 9e-041
Identities = 26/31 (83%), Positives = 26/31 (83%)
Frame = +1 / -2
Query: 781 LVLRARVVGRQHRVRGDVALLHEHRLGVAVA 873
LVL ARVVG QHRVR DV LLHEH LGVAVA
Sbjct: 94 LVLGARVVGGQHRVRPDVPLLHEHHLGVAVA 2
Score = 52.8 bits (109), Expect(2) = 3e-028
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -2 / +3
Query: 593 GSRRASRSTRPRGWTPANCTRMXXXXXXXXXXTAFSE 483
GSRRASRSTRPRGWTP +CTR TA SE
Sbjct: 282 GSRRASRSTRPRGWTPPSCTRTSSTPPSTST*TASSE 392
Score = 47.8 bits (98), Expect(4) = 9e-041
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +3 / -1
Query: 597 ARTPRARSPG*CSEGSATLGS 659
ARTPRARSPG*CS GSATLGS
Sbjct: 278 ARTPRARSPG*CSAGSATLGS 216
Score = 38.6 bits (78), Expect(4) = 9e-041
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / -2
Query: 664 EHGFLRHVLPPERLAG 711
EHGFLRHVLP ERLAG
Sbjct: 211 EHGFLRHVLPLERLAG 164
>gb|BG054078.1|BG054078 OV2_3_B08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 494
Score = 295 bits (638), Expect = 1e-078
Identities = 126/142 (88%), Positives = 130/142 (91%)
Frame = -1 / +2
Query: 870 DGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRR 691
DGDTK VFVEEGDI TYTVLAADDPRAENK LYIKPPANTLSHNELLSLWEKKTGKTF+R
Sbjct: 2 DGDTKVVFVEEGDIGTYTVLAADDPRAENKTLYIKPPANTLSHNELLSLWEKKTGKTFQR 181
Query: 690 EYVPEEAVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEIDPAKGVDASELYPDVKYTTV 511
EYVPEEAVLKQIQESPIPLNIILAIGHAA+VRGEQTGFEIDPAK VDA+ELYPDVKYTTV
Sbjct: 182 EYVPEEAVLKQIQESPIPLNIILAIGHAAYVRGEQTGFEIDPAKRVDATELYPDVKYTTV 361
Query: 510 DEYLNRFL*A*GLNKQDVTYGR 445
DEYLNRFL*+ DV GR
Sbjct: 362 DEYLNRFL*SLKKQDDDV*CGR 427
Score = 237 bits (513), Expect = 2e-061
Identities = 109/150 (72%), Positives = 114/150 (76%)
Frame = +2 / -3
Query: 422 TSTHHGRARPYVTSCLLRPQAQRKRLRYSSTVVYLTSGYSSLASTPLAGSISKPVCSPRT 601
T++ RP+ TS + QRKR RYSSTVVYLTSGYSS+AST LAGSISKPVCSPRT
Sbjct: 450 TNSSSRLGRPHHTSSSCFFRLQRKRFRYSSTVVYLTSGYSSVASTLLAGSISKPVCSPRT 271
Query: 602 NAACPIARMMFRGIGDSWICLSTASSGTYSRRNVLPXXXXXXXXXXXXXXXXAGGLMYST 781
AACPIARMMF GIGDSWICLSTASSGTYSR NVLP AGGLMYS
Sbjct: 270 YAACPIARMMFSGIGDSWICLSTASSGTYSRWNVLPVFFSHSDSSSLCDSVLAGGLMYSV 91
Query: 782 LFSARGSSAASTVYVAMSPSSTNTALVSPS 871
LFSARGSSAASTVYV MSPSSTNT LVSPS
Sbjct: 90 LFSARGSSAASTVYVPMSPSSTNTTLVSPS 1
Score = 95.0 bits (201), Expect(2) = 3e-028
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -3 / +1
Query: 712 DRQDVPAGVRAGGSRAQADPRVADPSEHHPGDRARGVRAWGA 587
DRQDVPAGVRA GSRAQADPRVADP+EHHPGDRARGVRA GA
Sbjct: 160 DRQDVPAGVRA*GSRAQADPRVADPAEHHPGDRARGVRAGGA 285
Score = 81.3 bits (171), Expect(4) = 3e-040
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +1 / -2
Query: 484 SEKAVEVLVDGGVLDIRVQFAGVHPLGRVDLEARLLPTH 600
SE+AV+VLVDGGVLD+RVQ GVHPLGRVDLEARLLP H
Sbjct: 388 SEEAVQVLVDGGVLDVRVQLGGVHPLGRVDLEARLLPPH 272
Score = 56.1 bits (116), Expect(4) = 3e-040
Identities = 25/30 (83%), Positives = 25/30 (83%)
Frame = +1 / -2
Query: 781 LVLRARVVGRQHRVRGDVALLHEHRLGVAV 870
LVL ARVVG QHRVR DV LLHEH LGVAV
Sbjct: 91 LVLGARVVGGQHRVRPDVPLLHEHHLGVAV 2
Score = 52.8 bits (109), Expect(2) = 3e-028
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -2 / +3
Query: 593 GSRRASRSTRPRGWTPANCTRMXXXXXXXXXXTAFSE 483
GSRRASRSTRPRGWTP +CTR TA SE
Sbjct: 279 GSRRASRSTRPRGWTPPSCTRTSSTPPSTST*TASSE 389
Score = 47.8 bits (98), Expect(4) = 3e-040
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +3 / -1
Query: 597 ARTPRARSPG*CSEGSATLGS 659
ARTPRARSPG*CS GSATLGS
Sbjct: 275 ARTPRARSPG*CSAGSATLGS 213
Score = 38.6 bits (78), Expect(4) = 3e-040
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / -2
Query: 664 EHGFLRHVLPPERLAG 711
EHGFLRHVLP ERLAG
Sbjct: 208 EHGFLRHVLPLERLAG 161
>gb|BG357242.1|BG357242 OV2_11_E10.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 471
Score = 282 bits (610), Expect = 1e-074
Identities = 124/132 (93%), Positives = 129/132 (97%)
Frame = -1 / +2
Query: 1416 *MASEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVT 1237
*MASEKSKILVVGGTGYLGRHVVAASARLGHPT ALVRDTAPSDPAKAALL+SFQDAGVT
Sbjct: 68 *MASEKSKILVVGGTGYLGRHVVAASARLGHPTVALVRDTAPSDPAKAALLQSFQDAGVT 247
Query: 1236 LLKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVD 1057
L+KGDLYDQASLVSAVKGADVVIS LGS+QIADQ+RL+DAIKEAGNVKRFFPSEFGLDVD
Sbjct: 248 LVKGDLYDQASLVSAVKGADVVISTLGSLQIADQTRLIDAIKEAGNVKRFFPSEFGLDVD 427
Query: 1056 RTGIVEPAKSIL 1021
RTGIVEP KSIL
Sbjct: 428 RTGIVEPGKSIL 463
Score = 245 bits (529), Expect = 1e-063
Identities = 105/135 (77%), Positives = 108/135 (80%)
Frame = +2 / -1
Query: 1013 LAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFT 1192
L R+DL GST+PVRSTSRPNSDGKNLLT PASLMAS SR+WSAIC DPS EMTTSAPFT
Sbjct: 471 LPARIDLPGSTIPVRSTSRPNSDGKNLLTLPASLMASMSRVWSAICSDPSVEMTTSAPFT 292
Query: 1193 ALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYP 1372
ALTRLAWS RSPL SVTPASWK TSA VGWPSRALAATTC PRYP
Sbjct: 291 ALTRLAWS*RSPLTSVTPASWKLWSSAALAGSEGAVSLTSATVGWPSRALAATTCRPRYP 112
Query: 1373 VPPTTRILLFSDAIY 1417
VPPTTRILLFSDAIY
Sbjct: 111 VPPTTRILLFSDAIY 67
Score = 143 bits (307), Expect(2) = 9e-050
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = +1 / -3
Query: 1051 RAVHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVAL 1230
RAVHVQAELRREEPLDV+GLLDGVDEP LVGDL R E GDDHV ALH A +ASLVV+VAL
Sbjct: 433 RAVHVQAELRREEPLDVAGLLDGVDEPGLVGDLQRPERGDDHVGALHGADKASLVVEVAL 254
Query: 1231 EERHAGVLEALEQ 1269
+ERHAGVLEALEQ
Sbjct: 253 DERHAGVLEALEQ 215
Score = 76.2 bits (160), Expect(2) = 9e-050
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1 / -3
Query: 1327 AQPRARRHDVPAQVPRAADHQDLALLRRHLS 1419
AQPRARRHDVPAQVPRAADHQDLALLRRHLS
Sbjct: 157 AQPRARRHDVPAQVPRAADHQDLALLRRHLS 65
Score = 62.0 bits (129), Expect(5) = 2e-027
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -3 / +1
Query: 1321 HLGARQGHGAVRPGQSGAAQELPGRRRDAPQ 1229
H ARQGHGA+RPGQ GAA ELPGRRRDA Q
Sbjct: 163 HRRARQGHGALRPGQGGAAPELPGRRRDARQ 255
Score = 46.0 bits (94), Expect(5) = 2e-027
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -3 / +1
Query: 1417 IDGVGEEQDPGGRRHGV 1367
IDGVGEEQDPGGRRHGV
Sbjct: 67 IDGVGEEQDPGGRRHGV 117
Score = 33.1 bits (66), Expect(5) = 2e-027
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2 / +3
Query: 1175 WSSPCSDRCRSPTR 1134
WSSP S RCRSPTR
Sbjct: 309 WSSPRSGRCRSPTR 350
Score = 28.1 bits (55), Expect(5) = 2e-027
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / +3
Query: 1352 SWRRARGWA 1326
SWRRARGWA
Sbjct: 132 SWRRARGWA 158
Score = 27.6 bits (54), Expect(5) = 2e-027
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / +1
Query: 1117 HQGGRKRQEVL 1085
HQGGR+RQEVL
Sbjct: 367 HQGGRQRQEVL 399
>gb|CW032781.1|CW032781 104_262_10501588_114_30361 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10501588, DNA
sequence
Length = 591
Score = 222 bits (480), Expect(2) = 3e-066
Identities = 98/107 (91%), Positives = 101/107 (94%)
Frame = -1 / +1
Query: 1413 MASEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTL 1234
MASEKS+ILVVGGTGYLGRHVVAASARLGHPT ALVRDTAPSDPAKAALLKSFQD GVTL
Sbjct: 85 MASEKSRILVVGGTGYLGRHVVAASARLGHPTLALVRDTAPSDPAKAALLKSFQDTGVTL 264
Query: 1233 LKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVK 1093
LKGDLYDQASL SAVK ADVVIS LG MQIADQ+RL+DAIKEAGNVK
Sbjct: 265 LKGDLYDQASLASAVKAADVVISTLGKMQIADQARLIDAIKEAGNVK 405
Score = 186 bits (401), Expect = 7e-046
Identities = 81/119 (68%), Positives = 85/119 (71%)
Frame = +2 / -2
Query: 1058 STSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRS 1237
S +R + + LT PASLMAS S WSAICI PS EMTTSA TAL RLAWSYRSPLRS
Sbjct: 440 SAARGRNRTRRTLTLPASLMASMSLAWSAICIFPSVEMTTSAALTALARLAWSYRSPLRS 261
Query: 1238 VTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYPVPPTTRILLFSDAI 1414
VTP SWK TSA+VGWPS ALAATTCLPRYPVPPTTRILLFSDAI
Sbjct: 260 VTPVSWKLLSSAALAGSEGAVSLTSAKVGWPSLALAATTCLPRYPVPPTTRILLFSDAI 84
Score = 111 bits (236), Expect(3) = 9e-044
Identities = 48/59 (81%), Positives = 51/59 (86%)
Frame = +1 / -1
Query: 1093 LDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEERHAGVLEALEQ 1269
LDV+GLLDG+DEP LVGDLH E GDDHV +L A QASLVVQVALEERHAGVLEALEQ
Sbjct: 405 LDVAGLLDGIDEPCLVGDLHLPERGDDHVGSLDGARQASLVVQVALEERHAGVLEALEQ 229
Score = 64.3 bits (134), Expect(3) = 9e-044
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1 / -1
Query: 1327 AQPRARRHDVPAQVPRAADHQDLALLRRH 1413
A+PRARRHD+PAQVPR ADHQD ALLRRH
Sbjct: 171 AEPRARRHDMPAQVPRPADHQDPALLRRH 85
Score = 51.9 bits (107), Expect(2) = 3e-066
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -1 / +3
Query: 1095 KRFFPSEFGLDVDRTGIVEPAK 1030
+RFFPSEFGLDVDRTGIVEP K
Sbjct: 525 QRFFPSEFGLDVDRTGIVEPGK 590
Score = 47.3 bits (97), Expect(3) = 9e-044
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2 / -3
Query: 1031 LAGSTMPVRSTSRPNSDGKN 1090
L GSTMPVRSTSRPNSDGKN
Sbjct: 589 LPGSTMPVRSTSRPNSDGKN 530
>gb|BF317701.1|BF317701 OV1_12_C03.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 533
Score = 252 bits (545), Expect = 9e-066
Identities = 108/122 (88%), Positives = 112/122 (91%)
Frame = -1 / +1
Query: 810 AADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQIQESPIPLN 631
AADDPRAENK LYIKPPANTLSHNELLSLWEKKTGKTF+REYVPEEAVLKQIQESPIPLN
Sbjct: 1 AADDPRAENKTLYIKPPANTLSHNELLSLWEKKTGKTFQREYVPEEAVLKQIQESPIPLN 180
Query: 630 IILAIGHAAFVRGEQTGFEIDPAKGVDASELYPDVKYTTVDEYLNRFL*A*GLNKQDVTY 451
IILAIGHAA+VRGEQTGFEIDPAK VDA+ELYPDVKYTTVDEYLNRFL*+ DV
Sbjct: 181 IILAIGHAAYVRGEQTGFEIDPAKRVDATELYPDVKYTTVDEYLNRFL*SLKKQDDDV*C 360
Query: 450 GR 445
GR
Sbjct: 361 GR 366
Score = 196 bits (423), Expect = 6e-049
Identities = 90/129 (69%), Positives = 95/129 (73%)
Frame = +2 / -1
Query: 422 TSTHHGRARPYVTSCLLRPQAQRKRLRYSSTVVYLTSGYSSLASTPLAGSISKPVCSPRT 601
T++ RP+ TS + QRKR RYSSTVVYLTSGYSS+AST LAGSISKPVCSPRT
Sbjct: 389 TNSSSRLGRPHHTSSSCFFRLQRKRFRYSSTVVYLTSGYSSVASTLLAGSISKPVCSPRT 210
Query: 602 NAACPIARMMFRGIGDSWICLSTASSGTYSRRNVLPXXXXXXXXXXXXXXXXAGGLMYST 781
AACPIARMMF GIGDSWICLSTASSGTYSR NVLP AGGLMYS
Sbjct: 209 YAACPIARMMFSGIGDSWICLSTASSGTYSRWNVLPVFFSHSDSSSLCDSVLAGGLMYSV 30
Query: 782 LFSARGSSA 808
LFSARGSSA
Sbjct: 29 LFSARGSSA 3
Score = 95.0 bits (201), Expect(2) = 3e-028
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -3 / +3
Query: 712 DRQDVPAGVRAGGSRAQADPRVADPSEHHPGDRARGVRAWGA 587
DRQDVPAGVRA GSRAQADPRVADP+EHHPGDRARGVRA GA
Sbjct: 99 DRQDVPAGVRA*GSRAQADPRVADPAEHHPGDRARGVRAGGA 224
Score = 81.3 bits (171), Expect(3) = 6e-029
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +1 / -3
Query: 484 SEKAVEVLVDGGVLDIRVQFAGVHPLGRVDLEARLLPTH 600
SE+AV+VLVDGGVLD+RVQ GVHPLGRVDLEARLLP H
Sbjct: 327 SEEAVQVLVDGGVLDVRVQLGGVHPLGRVDLEARLLPPH 211
Score = 52.8 bits (109), Expect(2) = 3e-028
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -2 / +2
Query: 593 GSRRASRSTRPRGWTPANCTRMXXXXXXXXXXTAFSE 483
GSRRASRSTRPRGWTP +CTR TA SE
Sbjct: 218 GSRRASRSTRPRGWTPPSCTRTSSTPPSTST*TASSE 328
Score = 47.8 bits (98), Expect(3) = 6e-029
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +3 / -2
Query: 597 ARTPRARSPG*CSEGSATLGS 659
ARTPRARSPG*CS GSATLGS
Sbjct: 214 ARTPRARSPG*CSAGSATLGS 152
Score = 38.6 bits (78), Expect(3) = 6e-029
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / -3
Query: 664 EHGFLRHVLPPERLAG 711
EHGFLRHVLP ERLAG
Sbjct: 147 EHGFLRHVLPLERLAG 100
>gb|BG356656.1|BG356656 OV2_26_B11.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 524
Score = 250 bits (541), Expect = 3e-065
Identities = 107/121 (88%), Positives = 111/121 (91%)
Frame = -1 / +2
Query: 807 ADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQIQESPIPLNI 628
ADDPRAENK LYIKPPANTLSHNELLSLWEKKTGKTF+REYVPEEAVLKQIQESPIPLNI
Sbjct: 2 ADDPRAENKTLYIKPPANTLSHNELLSLWEKKTGKTFQREYVPEEAVLKQIQESPIPLNI 181
Query: 627 ILAIGHAAFVRGEQTGFEIDPAKGVDASELYPDVKYTTVDEYLNRFL*A*GLNKQDVTYG 448
ILAIGHAA+VRGEQTGFEIDPAK VDA+ELYPDVKYTTVDEYLNRFL*+ DV G
Sbjct: 182 ILAIGHAAYVRGEQTGFEIDPAKRVDATELYPDVKYTTVDEYLNRFL*SLKKQDDDV*CG 361
Query: 447 R 445
R
Sbjct: 362 R 364
Score = 196 bits (423), Expect = 6e-049
Identities = 90/129 (69%), Positives = 95/129 (73%)
Frame = +2 / -3
Query: 422 TSTHHGRARPYVTSCLLRPQAQRKRLRYSSTVVYLTSGYSSLASTPLAGSISKPVCSPRT 601
T++ RP+ TS + QRKR RYSSTVVYLTSGYSS+AST LAGSISKPVCSPRT
Sbjct: 387 TNSSSRLGRPHHTSSSCFFRLQRKRFRYSSTVVYLTSGYSSVASTLLAGSISKPVCSPRT 208
Query: 602 NAACPIARMMFRGIGDSWICLSTASSGTYSRRNVLPXXXXXXXXXXXXXXXXAGGLMYST 781
AACPIARMMF GIGDSWICLSTASSGTYSR NVLP AGGLMYS
Sbjct: 207 YAACPIARMMFSGIGDSWICLSTASSGTYSRWNVLPVFFSHSDSSSLCDSVLAGGLMYSV 28
Query: 782 LFSARGSSA 808
LFSARGSSA
Sbjct: 27 LFSARGSSA 1
Score = 95.0 bits (201), Expect(2) = 3e-028
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -3 / +1
Query: 712 DRQDVPAGVRAGGSRAQADPRVADPSEHHPGDRARGVRAWGA 587
DRQDVPAGVRA GSRAQADPRVADP+EHHPGDRARGVRA GA
Sbjct: 97 DRQDVPAGVRA*GSRAQADPRVADPAEHHPGDRARGVRAGGA 222
Score = 81.3 bits (171), Expect(3) = 6e-029
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +1 / -2
Query: 484 SEKAVEVLVDGGVLDIRVQFAGVHPLGRVDLEARLLPTH 600
SE+AV+VLVDGGVLD+RVQ GVHPLGRVDLEARLLP H
Sbjct: 325 SEEAVQVLVDGGVLDVRVQLGGVHPLGRVDLEARLLPPH 209
Score = 52.8 bits (109), Expect(2) = 3e-028
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -2 / +3
Query: 593 GSRRASRSTRPRGWTPANCTRMXXXXXXXXXXTAFSE 483
GSRRASRSTRPRGWTP +CTR TA SE
Sbjct: 216 GSRRASRSTRPRGWTPPSCTRTSSTPPSTST*TASSE 326
Score = 47.8 bits (98), Expect(3) = 6e-029
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +3 / -1
Query: 597 ARTPRARSPG*CSEGSATLGS 659
ARTPRARSPG*CS GSATLGS
Sbjct: 212 ARTPRARSPG*CSAGSATLGS 150
Score = 38.6 bits (78), Expect(3) = 6e-029
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / -2
Query: 664 EHGFLRHVLPPERLAG 711
EHGFLRHVLP ERLAG
Sbjct: 145 EHGFLRHVLPLERLAG 98
>gb|CW318975.1|CW318975 104_811_11474241_148_35884_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474241, DNA
sequence
Length = 678
Score = 137 bits (293), Expect(3) = 6e-064
Identities = 60/67 (89%), Positives = 62/67 (92%)
Frame = -1 / -1
Query: 1293 PSDPAKAALLKSFQDAGVTLLKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAI 1114
PSDPAKAALLKSFQD GVTLLKGDLYDQASL SAVK ADVVIS LG MQIADQ+RL+DAI
Sbjct: 393 PSDPAKAALLKSFQDTGVTLLKGDLYDQASLASAVKAADVVISTLGKMQIADQARLIDAI 214
Query: 1113 KEAGNVK 1093
KEAGNVK
Sbjct: 213 KEAGNVK 193
Score = 111 bits (236), Expect(3) = 2e-050
Identities = 48/59 (81%), Positives = 51/59 (86%)
Frame = +1 / +1
Query: 1093 LDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEERHAGVLEALEQ 1269
LDV+GLLDG+DEP LVGDLH E GDDHV +L A QASLVVQVALEERHAGVLEALEQ
Sbjct: 193 LDVAGLLDGIDEPCLVGDLHLPERGDDHVGSLDGARQASLVVQVALEERHAGVLEALEQ 369
Score = 108 bits (231), Expect(2) = 8e-036
Identities = 47/67 (70%), Positives = 50/67 (74%)
Frame = +2 / +2
Query: 1058 STSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRS 1237
S +R + + LT PASLMAS S WSAICI PS EMTTSA TAL RLAWSYRSPLRS
Sbjct: 158 SAARGRNRTRRTLTLPASLMASMSLAWSAICIFPSVEMTTSAALTALARLAWSYRSPLRS 337
Query: 1238 VTPASWK 1258
VTP SWK
Sbjct: 338 VTPVSWK 358
Score = 93.6 bits (198), Expect(3) = 6e-064
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = -1 / -3
Query: 1413 MASEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAK 1276
MASEKS+ILVVGGTGYLGRHVVAASARLGHPT ALVRDTAP P +
Sbjct: 514 MASEKSRILVVGGTGYLGRHVVAASARLGHPTLALVRDTAPFRPGQ 377
Score = 84.5 bits (178), Expect(3) = 2e-050
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2 / +3
Query: 1307 TSAEVGWPSRALAATTCLPRYPVPPTTRILLFSDAI 1414
TSA+VGWPS ALAATTCLPRYPVPPTTRILLFSDAI
Sbjct: 408 TSAKVGWPSLALAATTCLPRYPVPPTTRILLFSDAI 515
Score = 64.3 bits (134), Expect(2) = 8e-036
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1 / +2
Query: 1327 AQPRARRHDVPAQVPRAADHQDLALLRRH 1413
A+PRARRHD+PAQVPR ADHQD ALLRRH
Sbjct: 428 AEPRARRHDMPAQVPRPADHQDPALLRRH 514
Score = 55.1 bits (114), Expect(3) = 6e-064
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = -1 / -3
Query: 1095 KRFFPSEFGLDVDRTGIVEPAKSI 1024
+RFFPSEFGLDVDRTGIVEP KS+
Sbjct: 73 QRFFPSEFGLDVDRTGIVEPGKSV 2
Score = 50.1 bits (103), Expect(3) = 2e-050
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +2 / +3
Query: 1028 DLAGSTMPVRSTSRPNSDGKN 1090
DL GSTMPVRSTSRPNSDGKN
Sbjct: 6 DLPGSTMPVRSTSRPNSDGKN 68
>gb|CW232475.1|CW232475 104_685_11212837_116_37365_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11212837, DNA
sequence
Length = 709
Score = 225 bits (486), Expect(2) = 7e-064
Identities = 91/122 (74%), Positives = 103/122 (84%)
Frame = -1 / -2
Query: 1017 AKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAVFVEE 838
AK IRRA EAAG+PYTY G+F G+GLP +GQVLA PP DKAVVLGDGDT FV+E
Sbjct: 561 AKAAIRRAVEAAGVPYTYVWTGYFFGYGLPGIGQVLAQAPPVDKAVVLGDGDTDVSFVDE 382
Query: 837 GDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQ 658
GDI TYTVLAADDPRA N+ LY+KPPANTLSHNELL+LWEKKTGKTF+R ++ E+AVLKQ
Sbjct: 381 GDIGTYTVLAADDPRAVNRTLYVKPPANTLSHNELLALWEKKTGKTFQRVHLAEDAVLKQ 202
Query: 657 IQ 652
IQ
Sbjct: 201 IQ 196
Score = 121 bits (259), Expect(2) = 8e-033
Identities = 57/93 (61%), Positives = 59/93 (63%)
Frame = +2 / +2
Query: 653 WICLSTASSGTYSRRNVLPXXXXXXXXXXXXXXXXAGGLMYSTLFSARGSSAASTVYVAM 832
WICL TASS +R NVLP AGGL YS LF+ARGSSAASTV V M
Sbjct: 197 WICLRTASSARCTRWNVLPVFFSQSASSSLCDSVLAGGLTYSVLFTARGSSAASTV*VPM 376
Query: 833 SPSSTNTALVSPSPRTTALSAGGPGARTCPTLG 931
SPSSTN VSPSPRTTALS GG A TCP G
Sbjct: 377 SPSSTNDTSVSPSPRTTALSTGGAWASTCPMPG 475
Score = 41.4 bits (84), Expect(2) = 8e-033
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = +2 / +2
Query: 983 AASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNL 1093
A++ R MDL GST RS SRPNSDG NL
Sbjct: 530 ASTARRIAALAVTNMDLVGSTAAERSASRPNSDGMNL 640
Score = 41.4 bits (84), Expect(2) = 7e-064
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = -1 / -2
Query: 1095 KRFFPSEFGLDVDRTGIVEPAKSI 1024
+RF PSEFGLD DR+ VEP +S+
Sbjct: 642 QRFIPSEFGLDADRSAAVEPTRSM 571
>gb|CW494632.1|CW494632 fsbb001f286a08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f286a08, DNA
sequence
Length = 694
Score = 225 bits (486), Expect(2) = 7e-064
Identities = 91/122 (74%), Positives = 103/122 (84%)
Frame = -1 / +2
Query: 1017 AKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAVFVEE 838
AK IRRA EAAG+PYTY G+F G+GLP +GQVLA PP DKAVVLGDGDT FV+E
Sbjct: 182 AKAAIRRAVEAAGVPYTYVWTGYFFGYGLPGIGQVLAQAPPVDKAVVLGDGDTDVSFVDE 361
Query: 837 GDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQ 658
GDI TYTVLAADDPRA N+ LY+KPPANTLSHNELL+LWEKKTGKTF+R ++ E+AVLKQ
Sbjct: 362 GDIGTYTVLAADDPRAVNRTLYVKPPANTLSHNELLALWEKKTGKTFQRVHLAEDAVLKQ 541
Query: 657 IQ 652
IQ
Sbjct: 542 IQ 547
Score = 121 bits (259), Expect(2) = 8e-033
Identities = 57/93 (61%), Positives = 59/93 (63%)
Frame = +2 / -2
Query: 653 WICLSTASSGTYSRRNVLPXXXXXXXXXXXXXXXXAGGLMYSTLFSARGSSAASTVYVAM 832
WICL TASS +R NVLP AGGL YS LF+ARGSSAASTV V M
Sbjct: 546 WICLRTASSARCTRWNVLPVFFSQSASSSLCDSVLAGGLTYSVLFTARGSSAASTV*VPM 367
Query: 833 SPSSTNTALVSPSPRTTALSAGGPGARTCPTLG 931
SPSSTN VSPSPRTTALS GG A TCP G
Sbjct: 366 SPSSTNDTSVSPSPRTTALSTGGAWASTCPMPG 268
Score = 41.4 bits (84), Expect(2) = 8e-033
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = +2 / -2
Query: 983 AASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNL 1093
A++ R MDL GST RS SRPNSDG NL
Sbjct: 213 ASTARRIAALAVTNMDLVGSTAAERSASRPNSDGMNL 103
Score = 41.4 bits (84), Expect(2) = 7e-064
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = -1 / +2
Query: 1095 KRFFPSEFGLDVDRTGIVEPAKSI 1024
+RF PSEFGLD DR+ VEP +S+
Sbjct: 101 QRFIPSEFGLDADRSAAVEPTRSM 172
>gb|CW235239.1|CW235239 104_690_11214876_116_37408_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214876, DNA
sequence
Length = 652
Score = 225 bits (486), Expect(2) = 7e-064
Identities = 91/122 (74%), Positives = 103/122 (84%)
Frame = -1 / +2
Query: 1017 AKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAVFVEE 838
AK IRRA EAAG+PYTY G+F G+GLP +GQVLA PP DKAVVLGDGDT FV+E
Sbjct: 158 AKAAIRRAVEAAGVPYTYVWTGYFFGYGLPGIGQVLAQAPPVDKAVVLGDGDTDVSFVDE 337
Query: 837 GDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQ 658
GDI TYTVLAADDPRA N+ LY+KPPANTLSHNELL+LWEKKTGKTF+R ++ E+AVLKQ
Sbjct: 338 GDIGTYTVLAADDPRAVNRTLYVKPPANTLSHNELLALWEKKTGKTFQRVHLAEDAVLKQ 517
Query: 657 IQ 652
IQ
Sbjct: 518 IQ 523
Score = 121 bits (259), Expect(2) = 8e-033
Identities = 57/93 (61%), Positives = 59/93 (63%)
Frame = +2 / -2
Query: 653 WICLSTASSGTYSRRNVLPXXXXXXXXXXXXXXXXAGGLMYSTLFSARGSSAASTVYVAM 832
WICL TASS +R NVLP AGGL YS LF+ARGSSAASTV V M
Sbjct: 522 WICLRTASSARCTRWNVLPVFFSQSASSSLCDSVLAGGLTYSVLFTARGSSAASTV*VPM 343
Query: 833 SPSSTNTALVSPSPRTTALSAGGPGARTCPTLG 931
SPSSTN VSPSPRTTALS GG A TCP G
Sbjct: 342 SPSSTNDTSVSPSPRTTALSTGGAWASTCPMPG 244
Score = 41.4 bits (84), Expect(2) = 8e-033
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = +2 / -2
Query: 983 AASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNL 1093
A++ R MDL GST RS SRPNSDG NL
Sbjct: 189 ASTARRIAALAVTNMDLVGSTAAERSASRPNSDGMNL 79
Score = 41.4 bits (84), Expect(2) = 7e-064
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = -1 / +2
Query: 1095 KRFFPSEFGLDVDRTGIVEPAKSI 1024
+RF PSEFGLD DR+ VEP +S+
Sbjct: 77 QRFIPSEFGLDADRSAAVEPTRSM 148
>gb|CW279063.1|CW279063 104_753_11406880_148_35430_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11406880, DNA
sequence
Length = 622
Score = 225 bits (486), Expect(2) = 7e-064
Identities = 91/122 (74%), Positives = 103/122 (84%)
Frame = -1 / +2
Query: 1017 AKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAVFVEE 838
AK IRRA EAAG+PYTY G+F G+GLP +GQVLA PP DKAVVLGDGDT FV+E
Sbjct: 83 AKAAIRRAVEAAGVPYTYVWTGYFFGYGLPGIGQVLAQAPPVDKAVVLGDGDTDVSFVDE 262
Query: 837 GDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQ 658
GDI TYTVLAADDPRA N+ LY+KPPANTLSHNELL+LWEKKTGKTF+R ++ E+AVLKQ
Sbjct: 263 GDIGTYTVLAADDPRAVNRTLYVKPPANTLSHNELLALWEKKTGKTFQRVHLAEDAVLKQ 442
Query: 657 IQ 652
IQ
Sbjct: 443 IQ 448
Score = 121 bits (259), Expect(2) = 8e-033
Identities = 57/93 (61%), Positives = 59/93 (63%)
Frame = +2 / -2
Query: 653 WICLSTASSGTYSRRNVLPXXXXXXXXXXXXXXXXAGGLMYSTLFSARGSSAASTVYVAM 832
WICL TASS +R NVLP AGGL YS LF+ARGSSAASTV V M
Sbjct: 447 WICLRTASSARCTRWNVLPVFFSQSASSSLCDSVLAGGLTYSVLFTARGSSAASTV*VPM 268
Query: 833 SPSSTNTALVSPSPRTTALSAGGPGARTCPTLG 931
SPSSTN VSPSPRTTALS GG A TCP G
Sbjct: 267 SPSSTNDTSVSPSPRTTALSTGGAWASTCPMPG 169
Score = 41.4 bits (84), Expect(2) = 8e-033
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = +2 / -2
Query: 983 AASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNL 1093
A++ R MDL GST RS SRPNSDG NL
Sbjct: 114 ASTARRIAALAVTNMDLVGSTAAERSASRPNSDGMNL 4
Score = 41.4 bits (84), Expect(2) = 7e-064
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = -1 / +2
Query: 1095 KRFFPSEFGLDVDRTGIVEPAKSI 1024
+RF PSEFGLD DR+ VEP +S+
Sbjct: 2 QRFIPSEFGLDADRSAAVEPTRSM 73
>gb|CN137170.1|CN137170 OX1_55_C12.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_55_C12_A002 5', mRNA sequence
Length = 809
Score = 138 bits (297), Expect(3) = 3e-063
Identities = 53/127 (41%), Positives = 81/127 (63%)
Frame = -1 / +3
Query: 1044 VEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDG 865
+EP + K+ +RRA E A IP+TY A FAG+ P + Q+ PP +K ++ GDG
Sbjct: 426 LEPGRITFDEKMELRRAIEEANIPHTYVSANCFAGYFCPNLCQMGTLLPPKEKVLIYGDG 605
Query: 864 DTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREY 685
+ K +F +E D+ATYTV + DDPRA NK +Y++PP N L+HN+++S WE +G + +
Sbjct: 606 NVKVIFCDEDDVATYTVKSVDDPRALNKTIYLRPPENILTHNDVISKWENLSGNVLEKIH 785
Query: 684 VPEEAVL 664
+P + L
Sbjct: 786 IPIDEFL 806
Score = 90.0 bits (190), Expect(3) = 3e-063
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = -1 / +3
Query: 1404 EKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKG 1225
EKS++LVVGGTGY+GR +V AS GHPT L+R D K +L SF+ G L++
Sbjct: 42 EKSRVLVVGGTGYIGRRIVRASLAEGHPTLVLMRPEIGLDIDKLQMLLSFKAQGARLVEA 221
Query: 1224 DLYDQASLVSAVKGADVVIS 1165
L D A+LV+AV ADVVIS
Sbjct: 222 SLEDHAALVAAVAQADVVIS 281
Score = 58.8 bits (122), Expect(3) = 3e-024
Identities = 34/91 (37%), Positives = 36/91 (39%)
Frame = +2 / -2
Query: 1133 LWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTS 1312
LW E+TTSA TA T AWS S P + K
Sbjct: 313 LWRCTPDMAEAEITTSACATAATSAAWSSSDASTSRAPCALKESSIWSLSMSRPISGRMR 134
Query: 1313 AEVGWPSRALAATTCLPRYPVPPTTRILLFS 1405
VG PS LA T P YPVPPTT LFS
Sbjct: 133 TSVG*PSARLARTIRRPMYPVPPTTSTRLFS 41
Score = 57.0 bits (118), Expect(3) = 3e-024
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = +2 / -2
Query: 758 AGGLMYSTLFSARGSSAASTVYVAMSPSSTNTALVSPSPRTTALSAGG 901
+GGL Y LF+ARGSS TVYVA S SS N L PSP S GG
Sbjct: 712 SGGLKYIVLFNARGSSTDFTVYVATSSSSQNITLTLPSP*MRTFSLGG 569
Score = 54.7 bits (113), Expect(3) = 3e-063
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = -1 / +3
Query: 1161 LGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTG 1048
L S ++ Q +LV+AIKEAGNVKRF PSEFG+D + G
Sbjct: 306 LHSHNLSLQHQLVEAIKEAGNVKRFIPSEFGMDPSKMG 419
Score = 41.8 bits (85), Expect(3) = 3e-024
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +2 / -2
Query: 1049 PVRSTSRPNSDGKNLLTFPASLMASTS 1129
P+ S PNSDG LTFPASL+ASTS
Sbjct: 418 PILDGSMPNSDGIKRLTFPASLIASTS 338
>gb|CN135696.1|CN135696 OX1_38_A08.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_38_A08_A002 5', mRNA sequence
Length = 840
Score = 130 bits (278), Expect(3) = 5e-060
Identities = 50/136 (36%), Positives = 81/136 (59%)
Frame = -1 / +1
Query: 1053 TGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVL 874
T +EP + K+ +RRA E A IP+TY A FA + P + Q+ PP +K V
Sbjct: 397 THALEPGRVTFEEKMDLRRAIEEANIPHTYVSANCFAAYFCPNLCQMRTLLPPKEKVHVY 576
Query: 873 GDGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFR 694
GDG+ K +F +E D+ATYT+ + DDPR NK +Y++PP N L+ N+++S W +G
Sbjct: 577 GDGNVKVIFCDEDDVATYTMKSVDDPRTLNKTIYLRPPENILTQNDVISTWXNLSGNVLE 756
Query: 693 REYVPEEAVLKQIQES 646
+ ++P + L ++++
Sbjct: 757 KIHIPADEFLASMKDT 804
Score = 89.5 bits (189), Expect(3) = 5e-060
Identities = 41/85 (48%), Positives = 55/85 (64%)
Frame = -1 / +1
Query: 1404 EKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKG 1225
EKS++LVVGGTG++GR +V AS GHPT L+R D K +L SF+ G L++
Sbjct: 28 EKSRVLVVGGTGFIGRRIVRASLAEGHPTLVLMRPEIGLDIDKLQMLLSFKAQGARLVEA 207
Query: 1224 DLYDQASLVSAVKGADVVISVLGSM 1150
L D A+LV+AV ADVVIS + +
Sbjct: 208 SLEDHAALVAAVAQADVVISAMSGV 282
Score = 66.1 bits (138), Expect(3) = 2e-027
Identities = 38/95 (40%), Positives = 45/95 (47%)
Frame = +2 / -2
Query: 758 AGGLMYSTLFSARGSSAASTVYVAMSPSSTNTALVSPSPRTTALSAGGPGARTCPTLGRX 937
+GGL Y LF+ RGSS VYVA S SS N L PSP T S GG R G+
Sbjct: 692 SGGLRYIVLFNVRGSSTDFMVYVATSSSSQNITLTLPSPYT*TFSLGGKRVRI*HRFGQK 513
Query: 938 XXXXXXXXXXV*GMPAASVARRMPTLAPRMDLAGS 1042
V GM A+S+AR + + L GS
Sbjct: 512 *AAKQLAET*VWGMLASSIARLRSIFSSNVTLPGS 408
Score = 62.9 bits (131), Expect(3) = 2e-027
Identities = 35/92 (38%), Positives = 37/92 (40%)
Frame = +2 / -2
Query: 1130 RLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXT 1309
RLW C E+TTSA TA T AWS S P + K
Sbjct: 302 RLWLRKCTPDMAEITTSACATAATSAAWSSSDASTSRAPCALKESSIWSLSMSRPISGRI 123
Query: 1310 SAEVGWPSRALAATTCLPRYPVPPTTRILLFS 1405
VG PS LA T P PVPPTT LFS
Sbjct: 122 RTSVGCPSARLARTIRRPMNPVPPTTSTRLFS 27
Score = 52.8 bits (109), Expect(3) = 5e-060
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -1 / +1
Query: 1155 SMQIADQSRLVDAIKEAGNVKRFFPSEFGLD 1063
S ++ Q RLV+AIKEAGN+KRF PSEFG+D
Sbjct: 292 SHNLSLQHRLVEAIKEAGNIKRFIPSEFGMD 384
Score = 33.6 bits (67), Expect(3) = 2e-027
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +2 / -2
Query: 1064 SRPNSDGKNLLTFPASLMASTS 1129
S PNSDG L PASL+ASTS
Sbjct: 383 SMPNSDGIKRLMLPASLIASTS 318
>gb|CN130191.1|CN130191 RHOH1_39_H05.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_39_H05_A002 5', mRNA sequence
Length = 747
Score = 126 bits (269), Expect(3) = 3e-058
Identities = 49/124 (39%), Positives = 75/124 (60%)
Frame = -1 / +1
Query: 1053 TGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVL 874
T +EP + K+ +RRA E A IP+TY A FA + P + Q+ PP +K V
Sbjct: 376 THALEPGRVTFEEKMDLRRAIEEANIPHTYVSANCFAAYFCPNLCQMRTLLPPKEKVHVY 555
Query: 873 GDGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFR 694
GDG+ K +F +E D+ATYT+ + DDPR NK +Y++PP N L+ N+++S WE +G
Sbjct: 556 GDGNVKVIFCDEDDVATYTMKSVDDPRTLNKTIYLRPPENILTXNDVISTWENLSGNVLE 735
Query: 693 REYV 682
+ ++
Sbjct: 736 KIHI 747
Score = 87.7 bits (185), Expect(3) = 3e-058
Identities = 41/85 (48%), Positives = 54/85 (63%)
Frame = -1 / +1
Query: 1404 EKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKG 1225
EKS++LVVGGTG +GR +V AS GHPT L+R D K +L SF+ G L++
Sbjct: 7 EKSRVLVVGGTGVIGRRIVRASLAEGHPTLVLMRPEIGLDIDKLQMLLSFKAQGARLVEA 186
Query: 1224 DLYDQASLVSAVKGADVVISVLGSM 1150
L D A+LV+AV ADVVIS + +
Sbjct: 187 SLEDHAALVAAVAQADVVISAMSGV 261
Score = 66.1 bits (138), Expect(3) = 2e-027
Identities = 38/95 (40%), Positives = 45/95 (47%)
Frame = +2 / -2
Query: 758 AGGLMYSTLFSARGSSAASTVYVAMSPSSTNTALVSPSPRTTALSAGGPGARTCPTLGRX 937
+GGL Y LF+ RGSS VYVA S SS N L PSP T S GG R G+
Sbjct: 671 SGGLRYIVLFNVRGSSTDFIVYVATSSSSQNITLTLPSPYT*TFSLGGKRVRI*HRFGQK 492
Query: 938 XXXXXXXXXXV*GMPAASVARRMPTLAPRMDLAGS 1042
V GM A+S+AR + + L GS
Sbjct: 491 *AAKQLAET*VWGMLASSIARLRSIFSSNVTLPGS 387
Score = 62.9 bits (131), Expect(3) = 2e-027
Identities = 35/92 (38%), Positives = 37/92 (40%)
Frame = +2 / -2
Query: 1130 RLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXT 1309
RLW C E+TTSA TA T AWS S P + K
Sbjct: 281 RLWLRKCTPDMAEITTSACATAATSAAWSSSDASTSRAPCALKESSIWSLSMSRPISGRI 102
Query: 1310 SAEVGWPSRALAATTCLPRYPVPPTTRILLFS 1405
VG PS LA T P PVPPTT LFS
Sbjct: 101 RTSVGCPSARLARTIRRPMTPVPPTTSTRLFS 6
Score = 52.8 bits (109), Expect(3) = 3e-058
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -1 / +1
Query: 1155 SMQIADQSRLVDAIKEAGNVKRFFPSEFGLD 1063
S ++ Q RLV+AIKEAGN+KRF PSEFG+D
Sbjct: 271 SHNLSLQHRLVEAIKEAGNIKRFIPSEFGMD 363
Score = 33.6 bits (67), Expect(3) = 2e-027
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +2 / -2
Query: 1064 SRPNSDGKNLLTFPASLMASTS 1129
S PNSDG L PASL+ASTS
Sbjct: 362 SMPNSDGIKRLMLPASLIASTS 297
>gb|CW030845.1|CW030845 104_259_10500460_114_30397 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500460, DNA
sequence
Length = 735
Score = 222 bits (480), Expect = 8e-057
Identities = 98/107 (91%), Positives = 101/107 (94%)
Frame = -1 / -2
Query: 1413 MASEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTL 1234
MASEKS+ILVVGGTGYLGRHVVAASARLGHPT ALVRDTAPSDPAKAALLKSFQD GVTL
Sbjct: 377 MASEKSRILVVGGTGYLGRHVVAASARLGHPTLALVRDTAPSDPAKAALLKSFQDTGVTL 198
Query: 1233 LKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVK 1093
LKGDLYDQASL SAVK ADVVIS LG MQIADQ+RL+DAIKEAGNVK
Sbjct: 197 LKGDLYDQASLASAVKAADVVISTLGKMQIADQARLIDAIKEAGNVK 57
Score = 186 bits (401), Expect = 7e-046
Identities = 81/119 (68%), Positives = 85/119 (71%)
Frame = +2 / +1
Query: 1058 STSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRS 1237
S +R + + LT PASLMAS S WSAICI PS EMTTSA TAL RLAWSYRSPLRS
Sbjct: 22 SAARGRNRTRRTLTLPASLMASMSLAWSAICIFPSVEMTTSAALTALARLAWSYRSPLRS 201
Query: 1238 VTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYPVPPTTRILLFSDAI 1414
VTP SWK TSA+VGWPS ALAATTCLPRYPVPPTTRILLFSDAI
Sbjct: 202 VTPVSWKLLSSAALAGSEGAVSLTSAKVGWPSLALAATTCLPRYPVPPTTRILLFSDAI 378
Score = 111 bits (236), Expect(2) = 2e-036
Identities = 48/59 (81%), Positives = 51/59 (86%)
Frame = +1 / +3
Query: 1093 LDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEERHAGVLEALEQ 1269
LDV+GLLDG+DEP LVGDLH E GDDHV +L A QASLVVQVALEERHAGVLEALEQ
Sbjct: 57 LDVAGLLDGIDEPCLVGDLHLPERGDDHVGSLDGARQASLVVQVALEERHAGVLEALEQ 233
Score = 64.3 bits (134), Expect(2) = 2e-036
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1 / +3
Query: 1327 AQPRARRHDVPAQVPRAADHQDLALLRRH 1413
A+PRARRHD+PAQVPR ADHQD ALLRRH
Sbjct: 291 AEPRARRHDMPAQVPRPADHQDPALLRRH 377
>gb|CW084941.1|CW084941 104_428_10946101_114_32560_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10946101, DNA
sequence
Length = 635
Score = 222 bits (480), Expect = 8e-057
Identities = 98/107 (91%), Positives = 101/107 (94%)
Frame = -1 / -2
Query: 1413 MASEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTL 1234
MASEKS+ILVVGGTGYLGRHVVAASARLGHPT ALVRDTAPSDPAKAALLKSFQD GVTL
Sbjct: 397 MASEKSRILVVGGTGYLGRHVVAASARLGHPTLALVRDTAPSDPAKAALLKSFQDTGVTL 218
Query: 1233 LKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVK 1093
LKGDLYDQASL SAVK ADVVIS LG MQIADQ+RL+DAIKEAGNVK
Sbjct: 217 LKGDLYDQASLASAVKAADVVISTLGKMQIADQARLIDAIKEAGNVK 77
Score = 186 bits (401), Expect = 7e-046
Identities = 81/119 (68%), Positives = 85/119 (71%)
Frame = +2 / +3
Query: 1058 STSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRS 1237
S +R + + LT PASLMAS S WSAICI PS EMTTSA TAL RLAWSYRSPLRS
Sbjct: 42 SAARGRNRTRRTLTLPASLMASMSLAWSAICIFPSVEMTTSAALTALARLAWSYRSPLRS 221
Query: 1238 VTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYPVPPTTRILLFSDAI 1414
VTP SWK TSA+VGWPS ALAATTCLPRYPVPPTTRILLFSDAI
Sbjct: 222 VTPVSWKLLSSAALAGSEGAVSLTSAKVGWPSLALAATTCLPRYPVPPTTRILLFSDAI 398
Score = 111 bits (236), Expect(2) = 2e-036
Identities = 48/59 (81%), Positives = 51/59 (86%)
Frame = +1 / +2
Query: 1093 LDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEERHAGVLEALEQ 1269
LDV+GLLDG+DEP LVGDLH E GDDHV +L A QASLVVQVALEERHAGVLEALEQ
Sbjct: 77 LDVAGLLDGIDEPCLVGDLHLPERGDDHVGSLDGARQASLVVQVALEERHAGVLEALEQ 253
Score = 64.3 bits (134), Expect(2) = 2e-036
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1 / +2
Query: 1327 AQPRARRHDVPAQVPRAADHQDLALLRRH 1413
A+PRARRHD+PAQVPR ADHQD ALLRRH
Sbjct: 311 AEPRARRHDMPAQVPRPADHQDPALLRRH 397
>gb|BF317700.1|BF317700 OV1_12_C02.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 357
Score = 125 bits (267), Expect(2) = 7e-054
Identities = 52/55 (94%), Positives = 53/55 (96%)
Frame = -1 / +3
Query: 789 ENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQIQESPIPLNII 625
ENK LYIKPPANTLSHNELLSLWEKKTGKTF+REYV EEAVLKQIQESPIPLNII
Sbjct: 6 ENKTLYIKPPANTLSHNELLSLWEKKTGKTFQREYVHEEAVLKQIQESPIPLNII 170
Score = 108 bits (230), Expect(2) = 7e-054
Identities = 47/60 (78%), Positives = 51/60 (85%)
Frame = -1 / +1
Query: 624 LAIGHAAFVRGEQTGFEIDPAKGVDASELYPDVKYTTVDEYLNRFL*A*GLNKQDVTYGR 445
+AIGHAA+VRGEQTGFEIDPAK VDA+ELYPDVKYTTVDEYLNRFL*+ DV GR
Sbjct: 172 VAIGHAAYVRGEQTGFEIDPAKRVDATELYPDVKYTTVDEYLNRFL*SLKKQDDDV*CGR 351
Score = 101 bits (216), Expect(3) = 4e-027
Identities = 46/59 (77%), Positives = 49/59 (83%)
Frame = +2 / -2
Query: 446 RPYVTSCLLRPQAQRKRLRYSSTVVYLTSGYSSLASTPLAGSISKPVCSPRTNAACPIA 622
RP+ TS + QRKR RYSSTVVYLTSGYSS+AST LAGSISKPVCSPRT AACPIA
Sbjct: 350 RPHHTSSSCFFRLQRKRFRYSSTVVYLTSGYSSVASTLLAGSISKPVCSPRTYAACPIA 174
Score = 67.5 bits (141), Expect(3) = 5e-023
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = -3 / +2
Query: 712 DRQDVPAGVRAGGSRAQADPRVADPSEHH 626
DRQDVPAGVRA GSRAQADPRVADP+EHH
Sbjct: 83 DRQDVPAGVRA*GSRAQADPRVADPAEHH 169
Score = 52.8 bits (109), Expect(3) = 5e-023
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -2 / +2
Query: 593 GSRRASRSTRPRGWTPANCTRMXXXXXXXXXXTAFSE 483
GSRRASRSTRPRGWTP +CTR TA SE
Sbjct: 203 GSRRASRSTRPRGWTPPSCTRTSSTPPSTST*TASSE 313
Score = 35.9 bits (72), Expect(3) = 4e-027
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1 / -2
Query: 664 EHGFLRHVLPPERLAG 711
EHGFL HVLP ERLAG
Sbjct: 131 EHGFLMHVLPLERLAG 84
Score = 27.2 bits (53), Expect(3) = 5e-023
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3 / +3
Query: 622 GDRARGVRAWGA 587
GDRARGVRA GA
Sbjct: 174 GDRARGVRAGGA 209
Score = 24.0 bits (46), Expect(3) = 4e-027
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 627 *CSEGSATLGS 659
*CS GSATLGS
Sbjct: 168 *CSAGSATLGS 136
>gb|CW175026.1|CW175026 104_587_11157718_116_36569_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11157718, DNA
sequence
Length = 688
Score = 116 bits (247), Expect(2) = 6e-052
Identities = 48/80 (60%), Positives = 56/80 (70%)
Frame = -1 / -1
Query: 1095 KRFFPSEFGLDVDRTGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQ 916
+RFFPSEFG DVD VEPAKS+ AK IRRA EA GIPYTY + FFAG LP +GQ
Sbjct: 610 QRFFPSEFGNDVDHVHAVEPAKSVFAAKASIRRAVEAEGIPYTYISSNFFAGRFLPAIGQ 431
Query: 915 VLAPGPPADKAVVLGDGDTK 856
+ G P DK ++LGDG+ K
Sbjct: 430 IGVTGLPIDKVLILGDGNVK 371
Score = 114 bits (243), Expect(2) = 6e-052
Identities = 43/68 (63%), Positives = 54/68 (79%)
Frame = -1 / -3
Query: 861 TKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYV 682
T A+F E D+ TYT+ A DDPR NK+LY++PP+N LSHNEL+SLWEKK GKTF R Y+
Sbjct: 206 TIAIFGTEEDVGTYTIKAVDDPRTLNKILYLRPPSNILSHNELISLWEKKVGKTFERVYI 27
Query: 681 PEEAVLKQ 658
PE+ VLK+
Sbjct: 26 PEDDVLKK 3
>gb|CW232476.1|CW232476 104_685_11212837_148_37366_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11212837, DNA
sequence
Length = 678
Score = 149 bits (319), Expect(3) = 9e-050
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = -1 / +2
Query: 1413 MASEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTL 1234
MASEKSKILVVG TG+LGRHVVAASAR GHPT ALVRDTAPSD AKAALL+SFQDAGVTL
Sbjct: 116 MASEKSKILVVGATGHLGRHVVAASARQGHPTLALVRDTAPSDAAKAALLQSFQDAGVTL 295
Query: 1233 LKGDLYDQASLVSAV 1189
+KGDL+DQASL+SAV
Sbjct: 296 VKGDLHDQASLLSAV 340
Score = 122 bits (262), Expect(3) = 2e-041
Identities = 51/75 (68%), Positives = 55/75 (73%)
Frame = +2 / -1
Query: 1190 TALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRY 1369
TAL+RLAWS+RSP SVTPASWK TSA+VGWP RALAATTCLPR+
Sbjct: 339 TALSRLAWSWRSPFTSVTPASWKLWSSAALAASEGAVSLTSAKVGWPCRALAATTCLPRW 160
Query: 1370 PVPPTTRILLFSDAI 1414
PV PTTRILLFSDAI
Sbjct: 159 PVAPTTRILLFSDAI 115
Score = 54.7 bits (113), Expect(4) = 1e-025
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = +1 / -3
Query: 1327 AQPRARRHDVPAQVPRAADHQDLALLRRH 1413
A PRARRHDVPA+V ADH DLALLRRH
Sbjct: 202 ALPRARRHDVPAEVACGADH*DLALLRRH 116
Score = 52.8 bits (109), Expect(3) = 9e-050
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = -1 / +3
Query: 1185 GADVVISVLGSMQIADQSRLVDAIKEAGNVK 1093
G +VIS +G+ QIADQ+RL+DAIKEAGNVK
Sbjct: 348 GRGLVISTVGAPQIADQTRLIDAIKEAGNVK 440
Score = 51.9 bits (107), Expect(3) = 2e-041
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +1 / -2
Query: 1093 LDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHR 1194
LDV+GLLDGVDEP LV DL R + GDD + R
Sbjct: 440 LDVAGLLDGVDEPGLVSDLRRPDRGDDQTTSAAR 339
Score = 49.6 bits (102), Expect(4) = 1e-025
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +1 / -3
Query: 1195 AHQASLVVQVALEERHAGVLEALEQ 1269
A QASLVV+VAL ERHAGVLEALEQ
Sbjct: 334 AEQASLVVEVALHERHAGVLEALEQ 260
Score = 46.9 bits (96), Expect(4) = 1e-025
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +2 / -3
Query: 1094 LTFPASLMASTSRLWSAICIDPSTEMTTSAP 1186
LT PASLMAS S +WSAIC P+ EMT P
Sbjct: 439 LTLPASLMASMSLVWSAICGAPTVEMTRPRP 347
Score = 41.4 bits (84), Expect(3) = 9e-050
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = -1 / +3
Query: 1095 KRFFPSEFGLDVDRTGIVEPAKSI 1024
+RF PSEFGLD DR+ VEP +S+
Sbjct: 597 QRFIPSEFGLDADRSAAVEPTRSM 668
Score = 40.5 bits (82), Expect(3) = 2e-041
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = +2 / -3
Query: 1025 MDLAGSTMPVRSTSRPNSDGKNL 1093
MDL GST RS SRPNSDG NL
Sbjct: 667 MDLVGSTAAERSASRPNSDGMNL 599
Score = 29.0 bits (57), Expect(4) = 1e-025
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1 / -2
Query: 1051 RAVHVQAELRREEPL 1095
RAV V+AELRR+EPL
Sbjct: 641 RAVGVKAELRRDEPL 597
>gb|BF420874.1|BF420874 OV1_12_C02.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 283
Score = 189 bits (408), Expect = 7e-047
Identities = 82/89 (92%), Positives = 87/89 (97%)
Frame = -1 / +3
Query: 1287 DPAKAALLKSFQDAGVTLLKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKE 1108
DPAKAALL+SFQDAGVTL+KGDLYDQASLVSAVKGADVVIS LGS+QIADQ+RL+DAIKE
Sbjct: 9 DPAKAALLQSFQDAGVTLVKGDLYDQASLVSAVKGADVVISTLGSLQIADQTRLIDAIKE 188
Query: 1107 AGNVKRFFPSEFGLDVDRTGIVEPAKSIL 1021
AGNVKRFFPSEFGLDVDRTGIVEP KSIL
Sbjct: 189 AGNVKRFFPSEFGLDVDRTGIVEPGKSIL 275
Score = 165 bits (354), Expect = 2e-039
Identities = 70/82 (85%), Positives = 73/82 (89%)
Frame = +2 / -1
Query: 1013 LAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFT 1192
L R+DL GST+PVRSTSRPNSDGKNLLT PASLMAS SR+WSAIC DPS EMTTSAPFT
Sbjct: 283 LPARIDLPGSTIPVRSTSRPNSDGKNLLTLPASLMASMSRVWSAICSDPSVEMTTSAPFT 104
Query: 1193 ALTRLAWSYRSPLRSVTPASWK 1258
ALTRLAWS RSPL SVTPASWK
Sbjct: 103 ALTRLAWS*RSPLTSVTPASWK 38
Score = 143 bits (307), Expect = 6e-033
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = +1 / -3
Query: 1051 RAVHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVAL 1230
RAVHVQAELRREEPLDV+GLLDGVDEP LVGDL R E GDDHV ALH A +ASLVV+VAL
Sbjct: 245 RAVHVQAELRREEPLDVAGLLDGVDEPGLVGDLQRPERGDDHVGALHGADKASLVVEVAL 66
Query: 1231 EERHAGVLEALEQ 1269
+ERHAGVLEALEQ
Sbjct: 65 DERHAGVLEALEQ 27
>gb|BG273478.1|BG273478 OV2_26_B11.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 314
Score = 189 bits (408), Expect = 7e-047
Identities = 85/91 (93%), Positives = 88/91 (96%)
Frame = -1 / +3
Query: 1416 *MASEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVT 1237
*MASEKSKILVVGGTGYLGRHVVAASARLGHPT ALVRDTAPSDPAKAALL+SFQDAGVT
Sbjct: 42 *MASEKSKILVVGGTGYLGRHVVAASARLGHPTVALVRDTAPSDPAKAALLQSFQDAGVT 221
Query: 1236 LLKGDLYDQASLVSAVKGADVVISVLGSMQI 1144
L+KGDLYDQASLVSA KGADVVIS LGS+QI
Sbjct: 222 LVKGDLYDQASLVSAGKGADVVISTLGSLQI 314
Score = 160 bits (343), Expect = 7e-038
Identities = 68/91 (74%), Positives = 68/91 (74%)
Frame = +2 / -2
Query: 1145 ICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVG 1324
IC DPS EMTTSAPF ALTRLAWS RSPL SVTPASWK TSA VG
Sbjct: 313 ICSDPSVEMTTSAPFPALTRLAWS*RSPLTSVTPASWKLWSSAALAGSEGAVSLTSATVG 134
Query: 1325 WPSRALAATTCLPRYPVPPTTRILLFSDAIY 1417
WPSRALAATTC PRYPVPPTTRILLFSDAIY
Sbjct: 133 WPSRALAATTCRPRYPVPPTTRILLFSDAIY 41
Score = 76.2 bits (160), Expect(2) = 3e-028
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1 / -1
Query: 1327 AQPRARRHDVPAQVPRAADHQDLALLRRHLS 1419
AQPRARRHDVPAQVPRAADHQDLALLRRHLS
Sbjct: 131 AQPRARRHDVPAQVPRAADHQDLALLRRHLS 39
Score = 71.6 bits (150), Expect(2) = 3e-028
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +1 / -1
Query: 1144 DLHRSEHGDDHVRALHRAHQASLVVQVALEERHAGVLEALEQ 1269
DL R E GDDHV AL A +ASLVV+VAL+ERHAGVLEALEQ
Sbjct: 314 DLQRPERGDDHVGALPGADKASLVVEVALDERHAGVLEALEQ 189
Score = 62.0 bits (129), Expect(4) = 1e-021
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -3 / +2
Query: 1321 HLGARQGHGAVRPGQSGAAQELPGRRRDAPQ 1229
H ARQGHGA+RPGQ GAA ELPGRRRDA Q
Sbjct: 137 HRRARQGHGALRPGQGGAAPELPGRRRDARQ 229
Score = 46.0 bits (94), Expect(4) = 1e-021
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -3 / +2
Query: 1417 IDGVGEEQDPGGRRHGV 1367
IDGVGEEQDPGGRRHGV
Sbjct: 41 IDGVGEEQDPGGRRHGV 91
Score = 28.1 bits (55), Expect(4) = 1e-021
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / +1
Query: 1352 SWRRARGWA 1326
SWRRARGWA
Sbjct: 106 SWRRARGWA 132
Score = 23.5 bits (45), Expect(4) = 1e-021
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / +1
Query: 1175 WSSPCSDRCR 1146
WSSP S RCR
Sbjct: 283 WSSPRSGRCR 312
>gb|CD432670.1|CD432670 ETH1_25_A11.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_25_A11_A002 5', mRNA sequence
Length = 722
Score = 88.1 bits (186), Expect(3) = 2e-046
Identities = 40/85 (47%), Positives = 55/85 (64%)
Frame = -1 / +3
Query: 1404 EKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKG 1225
E+S++LVVGGTG++GR +V AS GHPT L+R D K +L SF+ G L++
Sbjct: 96 ERSRVLVVGGTGFIGRRIVRASLAEGHPTLVLMRPEIGLDIDKLQMLLSFKAQGARLVEA 275
Query: 1224 DLYDQASLVSAVKGADVVISVLGSM 1150
L D A+LV+AV ADVVIS + +
Sbjct: 276 SLEDHAALVAAVAQADVVISAMSGV 350
Score = 86.3 bits (182), Expect(3) = 2e-046
Identities = 36/86 (41%), Positives = 51/86 (59%)
Frame = -1 / +3
Query: 1053 TGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVL 874
T +EP + K+ +RRA E A IP+TY A FA + P + Q+ PP +K V
Sbjct: 465 THALEPGRVTFEEKMDLRRAIEEANIPHTYVSANCFAAYFCPNLCQMRTLLPPKEKVHVY 644
Query: 873 GDGDTKAVFVEEGDIATYTVLAADDP 796
GDG+ K +F +E D+ATYT+ + DDP
Sbjct: 645 GDGNVKVIFCDEDDVATYTMKSVDDP 722
Score = 60.2 bits (125), Expect(3) = 8e-022
Identities = 34/92 (36%), Positives = 36/92 (39%)
Frame = +2 / -2
Query: 1130 RLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXT 1309
RLW C E+TTSA TA T AWS S P + K
Sbjct: 370 RLWLRKCTPDMAEITTSACATAATSAAWSSSDASTSRAPCALKESSIWSLSMSRPISGRI 191
Query: 1310 SAEVGWPSRALAATTCLPRYPVPPTTRILLFS 1405
VG PS LA T P PVPPTT L S
Sbjct: 190 RTSVGCPSARLARTIRRPMNPVPPTTSTRLLS 95
Score = 52.8 bits (109), Expect(3) = 2e-046
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -1 / +3
Query: 1155 SMQIADQSRLVDAIKEAGNVKRFFPSEFGLD 1063
S ++ Q RLV+AIKEAGN+KRF PSEFG+D
Sbjct: 360 SHNLSLQHRLVEAIKEAGNIKRFIPSEFGMD 452
Score = 49.6 bits (102), Expect(3) = 8e-022
Identities = 31/82 (37%), Positives = 36/82 (43%)
Frame = +2 / -2
Query: 797 GSSAASTVYVAMSPSSTNTALVSPSPRTTALSAGGPGARTCPTLGRXXXXXXXXXXXV*G 976
GSS VYVA S SS N L PSP T S GG R G+ V G
Sbjct: 721 GSSTDFXVYVATSSSSQNITLTLPSPYT*TFSLGGKRVRI*HRFGQK*AAKQLAET*VWG 542
Query: 977 MPAASVARRMPTLAPRMDLAGS 1042
M A+S+AR + + L GS
Sbjct: 541 MLASSIARLRSIFSSNVTLPGS 476
Score = 33.6 bits (67), Expect(3) = 8e-022
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +2 / -2
Query: 1064 SRPNSDGKNLLTFPASLMASTS 1129
S PNSDG L PASL+ASTS
Sbjct: 451 SMPNSDGIKRLMLPASLIASTS 386
>gb|BE596684.1|BE596684 PI1_58_C12.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 634
Score = 92.3 bits (195), Expect(3) = 2e-046
Identities = 39/91 (42%), Positives = 54/91 (59%)
Frame = -1 / +3
Query: 1053 TGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVL 874
T +EP + K+ +RRA E A IP+TY A FA + P + Q+ PP +K V
Sbjct: 360 THALEPGRVTFEEKMDLRRAIEEANIPHTYVSANCFAAYFCPNLCQMRTLLPPKEKVHVY 539
Query: 873 GDGDTKAVFVEEGDIATYTVLAADDPRAENK 781
GDG+ K +F +E D+ATYT+ + DDPR NK
Sbjct: 540 GDGNVKVIFCDEDDVATYTMKSVDDPRTLNK 632
Score = 82.2 bits (173), Expect(3) = 2e-046
Identities = 38/81 (46%), Positives = 51/81 (62%)
Frame = -1 / +3
Query: 1392 ILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGDLYD 1213
+LVVGGTG++GR +V AS GHPT L+R D K +L SF+ G L++ L D
Sbjct: 3 VLVVGGTGFIGRRIVRASLAEGHPTLVLMRPEIGLDIDKLQMLLSFKAQGARLVEASLED 182
Query: 1212 QASLVSAVKGADVVISVLGSM 1150
A+LV+AV ADVVIS + +
Sbjct: 183 HAALVAAVAQADVVISAMSGV 245
Score = 58.8 bits (122), Expect(3) = 2e-023
Identities = 32/86 (37%), Positives = 34/86 (39%)
Frame = +2 / -1
Query: 1130 RLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXT 1309
RLW C E+TTSA TA T AWS S P + K
Sbjct: 265 RLWMRKCTPDMAEITTSACATAATSAAWSSSDASTSRAPCALKESSIWSLSMSRPISGRI 86
Query: 1310 SAEVGWPSRALAATTCLPRYPVPPTT 1387
VG PS LA T P PVPPTT
Sbjct: 85 RTSVGCPSARLARTIRRPMNPVPPTT 8
Score = 56.5 bits (117), Expect(3) = 2e-023
Identities = 34/87 (39%), Positives = 40/87 (45%)
Frame = +2 / -1
Query: 782 LFSARGSSAASTVYVAMSPSSTNTALVSPSPRTTALSAGGPGARTCPTLGRXXXXXXXXX 961
LF+ RGSS VYVA S SS N L PSP T S GG R G+
Sbjct: 631 LFNVRGSSTDFIVYVATSSSSQNITLTLPSPYT*TFSLGGKRVRI*HRFGQK*AAKQLAE 452
Query: 962 XXV*GMPAASVARRMPTLAPRMDLAGS 1042
V GM A+S+AR + + L GS
Sbjct: 451 T*VWGMLASSIARLRSIFSSNVTLPGS 371
Score = 52.4 bits (108), Expect(3) = 2e-046
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = -1 / +3
Query: 1137 QSRLVDAIKEAGNVKRFFPSEFGLD 1063
Q RLV+AIKEAGN+KRF PSEFG+D
Sbjct: 273 QHRLVEAIKEAGNIKRFIPSEFGMD 347
Score = 33.6 bits (67), Expect(3) = 2e-023
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +2 / -1
Query: 1064 SRPNSDGKNLLTFPASLMASTS 1129
S PNSDG L PASL+ASTS
Sbjct: 346 SMPNSDGIKRLMLPASLIASTS 281
>gb|BE596683.1|BE596683 PI1_58_C11.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 625
Score = 88.6 bits (187), Expect(3) = 3e-045
Identities = 37/87 (42%), Positives = 52/87 (59%)
Frame = -1 / +3
Query: 1053 TGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVL 874
T +EP + K+ +RRA E A IP+TY A FA + P + Q+ PP +K V
Sbjct: 360 THALEPGRVTFEEKMDLRRAIEEANIPHTYVSANCFAAYFCPNLCQMRTLLPPKEKVHVY 539
Query: 873 GDGDTKAVFVEEGDIATYTVLAADDPR 793
GDG+ K +F +E D+ATYT+ + DDPR
Sbjct: 540 GDGNVKVIFCDEDDVATYTMKSVDDPR 620
Score = 82.2 bits (173), Expect(3) = 3e-045
Identities = 38/81 (46%), Positives = 51/81 (62%)
Frame = -1 / +3
Query: 1392 ILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGDLYD 1213
+LVVGGTG++GR +V AS GHPT L+R D K +L SF+ G L++ L D
Sbjct: 3 VLVVGGTGFIGRRIVRASLAEGHPTLVLMRPEIGLDIDKLQMLLSFKAQGARLVEASLED 182
Query: 1212 QASLVSAVKGADVVISVLGSM 1150
A+LV+AV ADVVIS + +
Sbjct: 183 HAALVAAVAQADVVISAMSGV 245
Score = 58.8 bits (122), Expect(3) = 5e-022
Identities = 32/86 (37%), Positives = 34/86 (39%)
Frame = +2 / -1
Query: 1130 RLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXT 1309
RLW C E+TTSA TA T AWS S P + K
Sbjct: 265 RLWMRKCTPDMAEITTSACATAATSAAWSSSDASTSRAPCALKESSIWSLSMSRPISGRI 86
Query: 1310 SAEVGWPSRALAATTCLPRYPVPPTT 1387
VG PS LA T P PVPPTT
Sbjct: 85 RTSVGCPSARLARTIRRPMNPVPPTT 8
Score = 52.4 bits (108), Expect(3) = 3e-045
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = -1 / +3
Query: 1137 QSRLVDAIKEAGNVKRFFPSEFGLD 1063
Q RLV+AIKEAGN+KRF PSEFG+D
Sbjct: 273 QHRLVEAIKEAGNIKRFIPSEFGMD 347
Score = 51.9 bits (107), Expect(3) = 5e-022
Identities = 32/85 (37%), Positives = 38/85 (44%)
Frame = +2 / -1
Query: 788 SARGSSAASTVYVAMSPSSTNTALVSPSPRTTALSAGGPGARTCPTLGRXXXXXXXXXXX 967
+ RGSS VYVA S SS N L PSP T S GG R G+
Sbjct: 625 NVRGSSTDFIVYVATSSSSQNITLTLPSPYT*TFSLGGKRVRI*HRFGQK*AAKQLAET* 446
Query: 968 V*GMPAASVARRMPTLAPRMDLAGS 1042
V GM A+S+AR + + L GS
Sbjct: 445 VWGMLASSIARLRSIFSSNVTLPGS 371
Score = 33.6 bits (67), Expect(3) = 5e-022
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +2 / -1
Query: 1064 SRPNSDGKNLLTFPASLMASTS 1129
S PNSDG L PASL+ASTS
Sbjct: 346 SMPNSDGIKRLMLPASLIASTS 281
>gb|CW121610.1|CW121610 104_499_11109998_148_34658_053 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11109998, DNA
sequence
Length = 585
Score = 149 bits (319), Expect(2) = 2e-044
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = -1 / +1
Query: 1413 MASEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTL 1234
MASEKSKILVVG TG+LGRHVVAASAR GHPT ALVRDTAPSD AKAALL+SFQDAGVTL
Sbjct: 136 MASEKSKILVVGATGHLGRHVVAASARQGHPTLALVRDTAPSDAAKAALLQSFQDAGVTL 315
Query: 1233 LKGDLYDQASLVSAV 1189
+KGDL+DQASL+SAV
Sbjct: 316 VKGDLHDQASLLSAV 360
Score = 122 bits (262), Expect(2) = 2e-036
Identities = 51/75 (68%), Positives = 55/75 (73%)
Frame = +2 / -2
Query: 1190 TALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRY 1369
TAL+RLAWS+RSP SVTPASWK TSA+VGWP RALAATTCLPR+
Sbjct: 359 TALSRLAWSWRSPFTSVTPASWKLWSSAALAASEGAVSLTSAKVGWPCRALAATTCLPRW 180
Query: 1370 PVPPTTRILLFSDAI 1414
PV PTTRILLFSDAI
Sbjct: 179 PVAPTTRILLFSDAI 135
Score = 54.7 bits (113), Expect(3) = 4e-024
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = +1 / -1
Query: 1327 AQPRARRHDVPAQVPRAADHQDLALLRRH 1413
A PRARRHDVPA+V ADH DLALLRRH
Sbjct: 222 ALPRARRHDVPAEVACGADH*DLALLRRH 136
Score = 52.8 bits (109), Expect(2) = 2e-044
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = -1 / +2
Query: 1185 GADVVISVLGSMQIADQSRLVDAIKEAGNVK 1093
G +VIS +G+ QIADQ+RL+DAIKEAGNVK
Sbjct: 368 GRGLVISTVGAPQIADQTRLIDAIKEAGNVK 460
Score = 51.9 bits (107), Expect(2) = 2e-036
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +1 / -3
Query: 1093 LDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHR 1194
LDV+GLLDGVDEP LV DL R + GDD + R
Sbjct: 460 LDVAGLLDGVDEPGLVSDLRRPDRGDDQTTSAAR 359
Score = 49.6 bits (102), Expect(3) = 4e-024
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +1 / -1
Query: 1195 AHQASLVVQVALEERHAGVLEALEQ 1269
A QASLVV+VAL ERHAGVLEALEQ
Sbjct: 354 AEQASLVVEVALHERHAGVLEALEQ 280
Score = 46.9 bits (96), Expect(3) = 4e-024
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +2 / -1
Query: 1094 LTFPASLMASTSRLWSAICIDPSTEMTTSAP 1186
LT PASLMAS S +WSAIC P+ EMT P
Sbjct: 459 LTLPASLMASMSLVWSAICGAPTVEMTRPRP 367
>gb|CW241115.1|CW241115 104_700_11218590_116_37544_029 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218590, DNA
sequence
Length = 422
Score = 126 bits (270), Expect(3) = 2e-043
Identities = 52/62 (83%), Positives = 54/62 (87%)
Frame = -1 / -3
Query: 924 VGQVLAPGPPADKAVVLGDGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLS 745
VGQ++AP PP DK VVLGD DTK VFVEEGDI TYTVLAADDPRAENK LYIKPPANTL
Sbjct: 420 VGQLMAPDPPTDKTVVLGDVDTKVVFVEEGDIGTYTVLAADDPRAENKTLYIKPPANTL* 241
Query: 744 HN 739
HN
Sbjct: 240 HN 235
Score = 108 bits (231), Expect(3) = 7e-032
Identities = 47/56 (83%), Positives = 48/56 (85%)
Frame = +2 / +2
Query: 758 AGGLMYSTLFSARGSSAASTVYVAMSPSSTNTALVSPSPRTTALSAGGPGARTCPT 925
AGGLMYS LFSARGSSAASTVYV MSPSSTNT LVS SPRTT LS GG GA +CPT
Sbjct: 254 AGGLMYSVLFSARGSSAASTVYVPMSPSSTNTTLVSTSPRTTVLSVGGSGAMSCPT 421
Score = 63.4 bits (132), Expect(3) = 2e-043
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = -1 / -1
Query: 765 PPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQIQ 652
PP S +LLSL EKKTGKTF+REYV EEAVLKQIQ
Sbjct: 260 PPPTRCSTTQLLSLLEKKTGKTFQREYVHEEAVLKQIQ 147
Score = 43.2 bits (88), Expect(3) = 7e-032
Identities = 20/39 (51%), Positives = 20/39 (51%)
Frame = +2 / +1
Query: 653 WICLSTASSGTYSRRNVLPXXXXXXXXXXXXXXXXAGGL 769
WICLSTASS TYSR NVLP GGL
Sbjct: 148 WICLSTASSCTYSRWNVLPVFFSNSDSSCVVLQRVGGGL 264
Score = 27.2 bits (53), Expect(3) = 2e-043
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / -3
Query: 637 SEHHPGDRA 611
SEHHPGDRA
Sbjct: 27 SEHHPGDRA 1
Score = 25.8 bits (50), Expect(3) = 7e-032
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +1
Query: 611 CPIARMMFR 637
CPIARMMFR
Sbjct: 1 CPIARMMFR 27
>gb|CN135617.1|CN135617 OX1_38_A08.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_38_A08_A002 3', mRNA sequence
Length = 769
Score = 132 bits (282), Expect(3) = 5e-042
Identities = 55/161 (34%), Positives = 89/161 (55%)
Frame = -1 / +1
Query: 1053 TGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVL 874
T +EP + K+ +RRA E A IP+TY A FA + P + Q+ PP +K V
Sbjct: 70 THALEPGRVTFEEKMDLRRAIEEANIPHTYVSANCFAAYFCPNLCQMRTLLPPKEKVHVY 249
Query: 873 GDGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFR 694
GDG+ K +F +E D+ATY + + DDPR NK + ++PP N L+ N+++S WE +G
Sbjct: 250 GDGNVKVIFCDEDDVATYPMKSVDDPRTLNKTISLRPPENILTQNDVISTWENLSGNVLE 429
Query: 693 REYVPEEAVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEI 571
+ ++P + L ++++ + + + F G T FEI
Sbjct: 430 KIHIPADEFLASMKDTDFANQVGVGHYYHIFYEGCLTNFEI 552
Score = 43.7 bits (89), Expect(3) = 5e-042
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -1 / +1
Query: 1119 AIKEAGNVKRFFPSEFGLD 1063
AIKEAGN+KRF PSEFG+D
Sbjct: 1 AIKEAGNIKRFIPSEFGMD 57
Score = 36.3 bits (73), Expect(3) = 5e-042
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = -1 / +1
Query: 558 GVDASELYPDVKYTTVDEYLNRFL* 484
G + + LYP+V+YT +DEY+ R++*
Sbjct: 562 GAEGTLLYPEVQYTRMDEYMKRYV* 636
>gb|BE362745.1|BE362745 DG1_89_A06.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 610
Score = 130 bits (278), Expect(3) = 7e-042
Identities = 50/136 (36%), Positives = 81/136 (59%)
Frame = -1 / +1
Query: 1053 TGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVL 874
T +EP + K+ + RA E A IP+TY A FA + P + Q+ PP +K V
Sbjct: 196 THALEPGRVTFEEKMDLTRAIEEANIPHTYVSANCFAAYFCPNLCQMRTLLPPKEKVHVY 375
Query: 873 GDGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFR 694
GDG+ K +F +E D+ATYT+ + DDPR NK +Y++PP N L+ N+++S WE +G
Sbjct: 376 GDGNVKVIFCDEDDVATYTMKSVDDPRTLNKTIYLRPPENILTQNDVISTWENLSGNVLE 555
Query: 693 REYVPEEAVLKQIQES 646
+ ++P + L ++++
Sbjct: 556 KIHIPADEFLASMKDT 603
Score = 52.8 bits (109), Expect(3) = 7e-042
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -1 / +1
Query: 1155 SMQIADQSRLVDAIKEAGNVKRFFPSEFGLD 1063
S ++ Q RLV+AIKEAGN+KRF PSEFG+D
Sbjct: 91 SHNLSLQHRLVEAIKEAGNIKRFIPSEFGMD 183
Score = 28.6 bits (56), Expect(3) = 7e-042
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1 / +1
Query: 1221 LYDQASLVSAVKGADVVISVLGSM 1150
L D A+LV+AV ADVVIS + +
Sbjct: 10 LEDHAALVAAVAQADVVISAMSGV 81
>gb|CW084108.1|CW084108 104_426_10945580_116_32441_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10945580, DNA
sequence
Length = 608
Score = 171 bits (368), Expect = 2e-041
Identities = 70/89 (78%), Positives = 78/89 (87%)
Frame = -1 / -3
Query: 918 QVLAPGPPADKAVVLGDGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHN 739
QVLA PP DKAVVLGDGDT FV+EGDI TYTVLAADDPRA N+ LY+KPPANTLSHN
Sbjct: 606 QVLAQAPPVDKAVVLGDGDTDVSFVDEGDIGTYTVLAADDPRAVNRTLYVKPPANTLSHN 427
Query: 738 ELLSLWEKKTGKTFRREYVPEEAVLKQIQ 652
ELL+LWEKKTGKTF+R ++ E+AVLKQIQ
Sbjct: 426 ELLALWEKKTGKTFQRVHLAEDAVLKQIQ 340
Score = 117 bits (250), Expect = 4e-025
Identities = 55/89 (61%), Positives = 57/89 (64%)
Frame = +2 / +2
Query: 653 WICLSTASSGTYSRRNVLPXXXXXXXXXXXXXXXXAGGLMYSTLFSARGSSAASTVYVAM 832
WICL TASS +R NVLP AGGL YS LF+ARGSSAASTV V M
Sbjct: 341 WICLRTASSARCTRWNVLPVFFSQSASSSLCDSVLAGGLTYSVLFTARGSSAASTV*VPM 520
Query: 833 SPSSTNTALVSPSPRTTALSAGGPGARTC 919
SPSSTN VSPSPRTTALS GG A TC
Sbjct: 521 SPSSTNDTSVSPSPRTTALSTGGAWASTC 607
>gb|CW344474.1|CW344474 104_847_11487972_148_36203_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11487972, DNA
sequence
Length = 659
Score = 94.5 bits (200), Expect(2) = 6e-037
Identities = 34/53 (64%), Positives = 46/53 (86%)
Frame = -1 / +2
Query: 810 AADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQIQ 652
A +DPR NK+LY++PPAN LSHNEL+S+WEKKTG+T ++E+VPEE +LK I+
Sbjct: 8 AVEDPRTLNKILYMRPPANVLSHNELISMWEKKTGRTLQKEHVPEEDILKWIK 166
Score = 85.4 bits (180), Expect(2) = 6e-037
Identities = 34/56 (60%), Positives = 45/56 (80%)
Frame = -1 / +1
Query: 651 ESPIPLNIILAIGHAAFVRGEQTGFEIDPAKGVDASELYPDVKYTTVDEYLNRFL* 484
E+ PLNI+L++G + FVRGEQ F+ID + GV+A++LYPDV YTTVDEYLN +*
Sbjct: 289 EAAFPLNILLSLGLSTFVRGEQANFDIDLSVGVEATQLYPDVAYTTVDEYLNGLI* 456
>gb|CN137086.1|CN137086 OX1_55_C12.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_55_C12_A002 3', mRNA sequence
Length = 730
Score = 145 bits (312), Expect(2) = 7e-037
Identities = 58/158 (36%), Positives = 94/158 (59%)
Frame = -1 / +3
Query: 1044 VEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDG 865
+EP + K+ +RRA E A IP+TY A FAG+ P + Q+ PP +K ++ GDG
Sbjct: 30 LEPGRITFDEKMELRRAIEEANIPHTYVSANCFAGYFCPNLCQMGTLLPPKEKVLIYGDG 209
Query: 864 DTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREY 685
+ K +F +E D+ATYTV + DDPRA NK +Y++PP N L+ N+++S WE +G + +
Sbjct: 210 NVKVIFCDEDDVATYTVKSVDDPRALNKTIYLRPPENILTQNDVISKWENLSGNVLEKIH 389
Query: 684 VPEEAVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEI 571
+P + L ++++ +++ + F G T FEI
Sbjct: 390 IPIDEFLASMKDTNFANQVVVGHFYHIFYEGCLTNFEI 503
Score = 30.9 bits (61), Expect(2) = 7e-037
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -1 / +3
Query: 558 GVDASELYPDVKYTTVDEYLNRFL* 484
G +A+ L P+V+YT + EY+ ++L*
Sbjct: 513 GAEATLLCPEVQYTRMGEYMKKYL* 587
>gb|CW084107.1|CW084107 104_426_10945580_114_32377_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10945580, DNA
sequence
Length = 411
Score = 149 bits (319), Expect = 1e-034
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = -1 / +2
Query: 1413 MASEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTL 1234
MASEKSKILVVG TG+LGRHVVAASAR GHPT ALVRDTAPSD AKAALL+SFQDAGVTL
Sbjct: 146 MASEKSKILVVGATGHLGRHVVAASARQGHPTLALVRDTAPSDAAKAALLQSFQDAGVTL 325
Query: 1233 LKGDLYDQASLVSAV 1189
+KGDL+DQASL+SAV
Sbjct: 326 VKGDLHDQASLLSAV 370
Score = 122 bits (262), Expect = 1e-026
Identities = 51/75 (68%), Positives = 55/75 (73%)
Frame = +2 / -1
Query: 1190 TALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRY 1369
TAL+RLAWS+RSP SVTPASWK TSA+VGWP RALAATTCLPR+
Sbjct: 369 TALSRLAWSWRSPFTSVTPASWKLWSSAALAASEGAVSLTSAKVGWPCRALAATTCLPRW 190
Query: 1370 PVPPTTRILLFSDAI 1414
PV PTTRILLFSDAI
Sbjct: 189 PVAPTTRILLFSDAI 145
>gb|CN150914.1|CN150914 WOUND1_72_F06.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_72_F06_A002 3', mRNA sequence
Length = 707
Score = 132 bits (283), Expect(2) = 1e-034
Identities = 54/156 (34%), Positives = 87/156 (55%)
Frame = -1 / +3
Query: 1038 PAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDT 859
P + K+ +RRA E A IP+TY A FA + P + Q+ PP +K V GDG+
Sbjct: 3 PGRVTFEEKMDLRRAIEEANIPHTYVSANCFAAYFCPNLCQMRTLLPPKEKVHVYGDGNV 182
Query: 858 KAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVP 679
K +F +E D+ATYT+ + DDPR NK +Y++PP N L+ +++S WE +G + ++P
Sbjct: 183 KVIFCDEDDVATYTMKSVDDPRTLNKTIYLRPPENILAQKDVISTWENLSGNVLEKIHIP 362
Query: 678 EEAVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEI 571
+ L ++++ + + + F G T FEI
Sbjct: 363 ADEFLASMKDTDFANQVGVGHYYHIFYEGCLTNFEI 470
Score = 36.3 bits (73), Expect(2) = 1e-034
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = -1 / +3
Query: 558 GVDASELYPDVKYTTVDEYLNRFL* 484
G + + LYP+V+YT +DEY+ R++*
Sbjct: 480 GAEGTLLYPEVQYTRMDEYMKRYV* 554
>gb|BE362389.1|BE362389 DG1_86_G06.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 571
Score = 89.5 bits (189), Expect(3) = 2e-034
Identities = 41/85 (48%), Positives = 55/85 (64%)
Frame = -1 / +3
Query: 1404 EKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKG 1225
EKS++LVVGGTG++GR +V AS GHPT L+R D K +L SF+ G L++
Sbjct: 36 EKSRVLVVGGTGFIGRRIVRASLAEGHPTLVLMRPEIGLDIDKLQMLLSFKAQGARLVEA 215
Query: 1224 DLYDQASLVSAVKGADVVISVLGSM 1150
L D A+LV+AV ADVVIS + +
Sbjct: 216 SLEDHAALVAAVAQADVVISAMSGV 290
Score = 52.8 bits (109), Expect(3) = 2e-034
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -1 / +3
Query: 1155 SMQIADQSRLVDAIKEAGNVKRFFPSEFGLD 1063
S ++ Q RLV+AIKEAGN+KRF PSEFG+D
Sbjct: 300 SHNLSLQHRLVEAIKEAGNIKRFIPSEFGMD 392
Score = 44.1 bits (90), Expect(3) = 2e-034
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = -1 / +3
Query: 1053 TGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPAD 889
T +EP + K+ +RRA E A IP+TY A FA + P + Q+ PP +
Sbjct: 405 THALEPGRVTFEEKMDLRRAIEEANIPHTYVSANCFAAYFCPNLCQMRTLLPPKE 569
>gb|CD425348.1|CD425348 SA1_11_G07.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_11_G07_A002 5', mRNA sequence
Length = 755
Score = 89.5 bits (189), Expect(4) = 4e-034
Identities = 41/85 (48%), Positives = 55/85 (64%)
Frame = -1 / +2
Query: 1404 EKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKG 1225
EKS++LVVGGTG++GR +V AS GHPT L+R D K +L SF+ G L++
Sbjct: 2 EKSRVLVVGGTGFIGRRIVRASLAEGHPTLVLMRPEIGLDIDKLQMLLSFKAQGARLVEA 181
Query: 1224 DLYDQASLVSAVKGADVVISVLGSM 1150
L D A+LV+AV ADVVIS + +
Sbjct: 182 SLEDHAALVAAVAQADVVISAMSGV 256
Score = 57.4 bits (119), Expect(4) = 4e-034
Identities = 26/66 (39%), Positives = 36/66 (54%)
Frame = -1 / +3
Query: 1053 TGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVL 874
T +EP + K+ +RRA E A IP+TY A FA + P + Q+ PP +K V
Sbjct: 492 THALEPGRVTFEEKMDLRRAIEEANIPHTYVSANCFAAYFCPNLCQMRTLLPPKEKVHVY 671
Query: 873 GDGDTK 856
GDG+ K
Sbjct: 672 GDGNVK 689
Score = 31.3 bits (62), Expect(4) = 4e-034
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1 / +2
Query: 1155 SMQIADQSRLVDAIKEAGNVK 1093
S ++ Q RLV+AIKEAGN+K
Sbjct: 266 SHNLSLQHRLVEAIKEAGNIK 328
Score = 24.4 bits (47), Expect(4) = 4e-034
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1 / +3
Query: 1092 RFFPSEFGLD 1063
RF PSEFG+D
Sbjct: 450 RFIPSEFGMD 479
>gb|CW344473.1|CW344473 104_847_11487972_116_36204_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11487972, DNA
sequence
Length = 732
Score = 85.4 bits (180), Expect(2) = 5e-034
Identities = 34/56 (60%), Positives = 45/56 (80%)
Frame = -1 / -2
Query: 651 ESPIPLNIILAIGHAAFVRGEQTGFEIDPAKGVDASELYPDVKYTTVDEYLNRFL* 484
E+ PLNI+L++G + FVRGEQ F+ID + GV+A++LYPDV YTTVDEYLN +*
Sbjct: 473 EAAFPLNILLSLGLSTFVRGEQANFDIDLSVGVEATQLYPDVAYTTVDEYLNGLI* 306
Score = 84.9 bits (179), Expect(2) = 5e-034
Identities = 30/45 (66%), Positives = 41/45 (91%)
Frame = -1 / -3
Query: 786 NKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQIQ 652
NK+LY++PPAN LSHNEL+S+WEKKTG+T ++E+VPEE +LK I+
Sbjct: 730 NKILYMRPPANVLSHNELISMWEKKTGRTLQKEHVPEEDILKWIK 596
>gb|CW034107.1|CW034107 104_264_10502356_114_30358 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502356, DNA
sequence
Length = 553
Score = 121 bits (259), Expect(2) = 1e-033
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = -1 / -2
Query: 651 ESPIPLNIILAIGHAAFVRGEQTGFEIDPAKGVDASELYPDVKYTTVDEYLNRFL* 484
ESPIPL+IILAIGHA +VRGEQ GFEIDPA GVDASELYPDVKYTTVDEYLNRF+*
Sbjct: 408 ESPIPLSIILAIGHAGYVRGEQAGFEIDPAMGVDASELYPDVKYTTVDEYLNRFV* 241
Score = 116 bits (247), Expect(2) = 4e-032
Identities = 49/56 (87%), Positives = 50/56 (89%)
Frame = +2 / +2
Query: 485 QRKRLRYSSTVVYLTSGYSSLASTPLAGSISKPVCSPRTNAACPIARMMFRGIGDS 652
Q KRLRYSSTVVYLTSGYSSLASTP+AGSISKP CSPRT ACPIARMM GIGDS
Sbjct: 242 QTKRLRYSSTVVYLTSGYSSLASTPMAGSISKPACSPRTYPACPIARMMLSGIGDS 409
Score = 79.0 bits (166), Expect(3) = 5e-027
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +1 / +1
Query: 484 SEKAVEVLVDGGVLDIRVQFAGVHPLGRVDLEARLLPTH 600
S++AVEVL+DGGVLD+RVQ AGVHP GRVDLEA LLPTH
Sbjct: 241 SDEAVEVLIDGGVLDVRVQLAGVHPHGRVDLEAGLLPTH 357
Score = 58.3 bits (121), Expect(3) = 6e-024
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -3 / -1
Query: 652 RVADPSEHHPGDRARGVRAWGA 587
RVADP+EHHPGDRARGVRAWGA
Sbjct: 409 RVADPAEHHPGDRARGVRAWGA 344
Score = 50.1 bits (103), Expect(3) = 6e-024
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = -2 / -3
Query: 596 VGSRRASRSTRPRGWTPANCTRMXXXXXXXXXXTAFSE 483
VGSR ASRSTRP GWTPA+CTR TA S+
Sbjct: 353 VGSRPASRSTRPWGWTPASCTRTSSTPPSMSTSTASSD 240
Score = 46.9 bits (96), Expect(3) = 5e-027
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3 / +3
Query: 594 HARTPRARSPG*CSEGSATL 653
HARTPRARSPG*CS GSATL
Sbjct: 351 HARTPRARSPG*CSAGSATL 410
Score = 44.6 bits (91), Expect(2) = 4e-032
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2 / +2
Query: 653 WICLSTASSGTYSRRNV 703
WICLSTASSGTYSRRNV
Sbjct: 500 WICLSTASSGTYSRRNV 550
Score = 44.1 bits (90), Expect(2) = 1e-033
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = -1 / -2
Query: 705 KTFRREYVPEEAVLKQIQ 652
KTFRREYVPEEAVLKQIQ
Sbjct: 552 KTFRREYVPEEAVLKQIQ 499
Score = 42.3 bits (86), Expect(3) = 6e-024
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = -3 / -1
Query: 706 QDVPAGVRAGGSRAQADPRV 647
+DVPAGVRA GSRAQADP+V
Sbjct: 553 KDVPAGVRARGSRAQADPKV 494
Score = 35.4 bits (71), Expect(3) = 5e-027
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / +1
Query: 664 EHGFLRHVLPPERL 705
EHGFL HVLPPERL
Sbjct: 511 EHGFLGHVLPPERL 552
>gb|BE356707.1|BE356707 DG1_12_E08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 562
Score = 89.5 bits (189), Expect(3) = 2e-033
Identities = 41/85 (48%), Positives = 55/85 (64%)
Frame = -1 / +3
Query: 1404 EKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKG 1225
EKS++LVVGGTG++GR +V AS GHPT L+R D K +L SF+ G L++
Sbjct: 36 EKSRVLVVGGTGFIGRRIVRASLAEGHPTLVLMRPEIGLDIDKLQMLLSFKAQGARLVEA 215
Query: 1224 DLYDQASLVSAVKGADVVISVLGSM 1150
L D A+LV+AV ADVVIS + +
Sbjct: 216 SLEDHAALVAAVAQADVVISAMSGV 290
Score = 52.4 bits (108), Expect(3) = 2e-033
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = -1 / +3
Query: 1137 QSRLVDAIKEAGNVKRFFPSEFGLD 1063
Q RLV+AIKEAGN+KRF PSEFG+D
Sbjct: 318 QHRLVEAIKEAGNIKRFIPSEFGMD 392
Score = 41.4 bits (84), Expect(3) = 2e-033
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -1 / +3
Query: 1053 TGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQV 913
T +EP + K+ +RRA E A IP+TY A FA + P + Q+
Sbjct: 405 THALEPGRVTFEEKMDLRRAIEEANIPHTYVSANCFAAYFCPNLCQM 545
>gb|BE593932.1|BE593932 WS1_104_B07.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 628
Score = 128 bits (274), Expect(2) = 2e-033
Identities = 52/143 (36%), Positives = 82/143 (57%)
Frame = -1 / +2
Query: 999 RATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAVFVEEGDIATY 820
RA E A IP+TY A FA + P + Q+ PP +K V GDG+ K +F +E D+ATY
Sbjct: 2 RAIEEANIPHTYVSANCFAAYFCPNLCQMRTLLPPKEKVHVYGDGNVKVIFCDEDDVATY 181
Query: 819 TVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQIQESPI 640
T+ + DDPR NK +Y++PP N L+ N+++S WE +G + ++P + L ++++
Sbjct: 182 TMKSVDDPRTLNKTIYLRPPENILTQNDVISTWENLSGNVLEKIHIPADEFLASMKDTDF 361
Query: 639 PLNIILAIGHAAFVRGEQTGFEI 571
+ + + F G T FEI
Sbjct: 362 ANQVGVGHYYHIFYEGCLTNFEI 430
Score = 36.3 bits (73), Expect(2) = 2e-033
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = -1 / +2
Query: 558 GVDASELYPDVKYTTVDEYLNRFL* 484
G + + LYP+V+YT +DEY+ R++*
Sbjct: 440 GAEGTLLYPEVQYTRMDEYMKRYV* 514
>gb|BM318563.1|BM318563 PI1_15_A07.b9_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 524
Score = 89.5 bits (189), Expect(3) = 1e-032
Identities = 41/85 (48%), Positives = 55/85 (64%)
Frame = -1 / +1
Query: 1404 EKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKG 1225
EKS++LVVGGTG++GR +V AS GHPT L+R D K +L SF+ G L++
Sbjct: 34 EKSRVLVVGGTGFIGRRIVRASLAEGHPTLVLMRPEIGLDIDKLQMLLSFKAQGARLVEA 213
Query: 1224 DLYDQASLVSAVKGADVVISVLGSM 1150
L D A+LV+AV ADVVIS + +
Sbjct: 214 SLEDHAALVAAVAQADVVISAMSGV 288
Score = 52.8 bits (109), Expect(3) = 1e-032
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -1 / +1
Query: 1155 SMQIADQSRLVDAIKEAGNVKRFFPSEFGLD 1063
S ++ Q RLV+AIKEAGN+KRF PSEFG+D
Sbjct: 298 SHNLSLQHRLVEAIKEAGNIKRFIPSEFGMD 390
Score = 38.2 bits (77), Expect(3) = 1e-032
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -1 / +1
Query: 1053 TGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGF 937
T +EP + K+ +RRA E A IP+TY A FA +
Sbjct: 403 THALEPGRVTFEEKMDLRRAIEEANIPHTYVSANCFAAY 519
>gb|BE596607.1|BE596607 PI1_58_C12.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 626
Score = 126 bits (269), Expect(2) = 1e-032
Identities = 51/142 (35%), Positives = 81/142 (57%)
Frame = -1 / +2
Query: 996 ATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAVFVEEGDIATYT 817
A E A IP+TY A FA + P + Q+ PP +K V GDG+ K +F +E D+ATYT
Sbjct: 2 AIEEANIPHTYVSANCFAAYFCPNLCQMRTLLPPKEKVHVYGDGNVKVIFCDEDDVATYT 181
Query: 816 VLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQIQESPIP 637
+ + DDPR NK +Y++PP N L+ N+++S WE +G + ++P + L ++++
Sbjct: 182 MKSVDDPRTLNKTIYLRPPENILTQNDVISTWENLSGNVLEKIHIPADEFLASMKDTDFA 361
Query: 636 LNIILAIGHAAFVRGEQTGFEI 571
+ + + F G T FEI
Sbjct: 362 NQVGVGHYYHIFYEGCLTNFEI 427
Score = 36.3 bits (73), Expect(2) = 1e-032
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = -1 / +2
Query: 558 GVDASELYPDVKYTTVDEYLNRFL* 484
G + + LYP+V+YT +DEY+ R++*
Sbjct: 437 GAEGTLLYPEVQYTRMDEYMKRYV* 511
>gb|BE596606.1|BE596606 PI1_58_C11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 617
Score = 126 bits (269), Expect(2) = 1e-032
Identities = 51/142 (35%), Positives = 81/142 (57%)
Frame = -1 / +2
Query: 996 ATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAVFVEEGDIATYT 817
A E A IP+TY A FA + P + Q+ PP +K V GDG+ K +F +E D+ATYT
Sbjct: 2 AIEEANIPHTYVSANCFAAYFCPNLCQMRTLLPPKEKVHVYGDGNVKVIFCDEDDVATYT 181
Query: 816 VLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQIQESPIP 637
+ + DDPR NK +Y++PP N L+ N+++S WE +G + ++P + L ++++
Sbjct: 182 MKSVDDPRTLNKTIYLRPPENILTQNDVISTWENLSGNVLEKIHIPADEFLASMKDTDFA 361
Query: 636 LNIILAIGHAAFVRGEQTGFEI 571
+ + + F G T FEI
Sbjct: 362 NQVGVGHYYHIFYEGCLTNFEI 427
Score = 36.3 bits (73), Expect(2) = 1e-032
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = -1 / +2
Query: 558 GVDASELYPDVKYTTVDEYLNRFL* 484
G + + LYP+V+YT +DEY+ R++*
Sbjct: 437 GAEGTLLYPEVQYTRMDEYMKRYV* 511
>gb|CW121609.1|CW121609 104_499_11109998_116_34662_053 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11109998, DNA
sequence
Length = 477
Score = 142 bits (305), Expect = 1e-032
Identities = 57/73 (78%), Positives = 65/73 (89%)
Frame = -1 / -1
Query: 870 DGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRR 691
DGDT FV+EGDI TYTVLAADDPRA N+ LY+KPPANTLSHNELL+LWEKKTGKTF+R
Sbjct: 477 DGDTDVSFVDEGDIGTYTVLAADDPRAVNRTLYVKPPANTLSHNELLALWEKKTGKTFQR 298
Query: 690 EYVPEEAVLKQIQ 652
++ E+AVLKQIQ
Sbjct: 297 VHLAEDAVLKQIQ 259
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,119,367,636
Number of Sequences: 832831
Number of extensions: 13536981
Number of successful extensions: 116606
Number of sequences better than 1.0e-020: 77
length of database: 163,786,556
effective HSP length: 56
effective length of database: 117,148,020
effective search space used: 49787908500
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)