TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3977955.2.1
(867 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG357676.1|BG357676 OV2_32_H07.g1_A002 Ovary 2 (OV2) Sor... 381 e-107
gb|BG049225.1|BG049225 OV1_17_B10.g1_A002 Ovary 1 (OV1) Sor... 215 5e-097
gb|CW192234.1|CW192234 104_614_11178915_148_36944_006 Sorgh... 215 5e-095
gb|CW328078.1|CW328078 104_824_11479103_148_35988_096 Sorgh... 215 4e-085
gb|BG048275.1|BG048275 OV1_16_B07.g1_A002 Ovary 1 (OV1) Sor... 170 5e-083
gb|BG240770.1|BG240770 OV1_38_A10.g1_A002 Ovary 1 (OV1) Sor... 220 2e-076
gb|BG411772.1|BG411772 OV2_37_H05.g1_A002 Ovary 2 (OV2) Sor... 215 1e-075
gb|BE918645.1|BE918645 FM1_2_G10.g1_A003 Floral-Induced Mer... 215 7e-073
gb|CW474162.1|CW474162 fsbb001f229n21k0 Sorghum methylation... 251 3e-067
gb|BG412480.1|BG412480 OV2_34_H02.g1_A002 Ovary 2 (OV2) Sor... 215 7e-063
gb|CW355045.1|CW355045 fsbb001f019i07f0 Sorghum methylation... 241 1e-062
gb|BG239895.1|BG239895 OV1_30_D03.g1_A002 Ovary 1 (OV1) Sor... 215 1e-060
gb|BG412481.1|BG412481 OV2_34_H03.g1_A002 Ovary 2 (OV2) Sor... 156 5e-057
gb|CW339305.1|CW339305 104_840_11485203_116_36138_016 Sorgh... 126 2e-055
gb|CW155885.1|CW155885 104_558_11146378_148_36365_037 Sorgh... 125 3e-053
gb|CW276959.1|CW276959 104_750_11405768_116_35395_018 Sorgh... 205 8e-052
gb|CW281478.1|CW281478 104_757_11408201_116_35463_077 Sorgh... 180 1e-050
gb|CW369334.1|CW369334 fsbb001f043l06f0 Sorghum methylation... 196 5e-049
gb|CW281479.1|CW281479 104_757_11408201_148_35459_077 Sorgh... 190 3e-047
gb|CW386938.1|CW386938 fsbb001f071b07f0 Sorghum methylation... 108 1e-046
gb|CW221063.1|CW221063 104_656_11197697_148_37167_079 Sorgh... 185 7e-046
gb|CW266135.1|CW266135 104_735_11232263_148_35265_084 Sorgh... 123 2e-045
gb|CW400557.1|CW400557 fsbb001f090o22f0 Sorghum methylation... 105 1e-043
gb|CL182214.1|CL182214 104_393_10897273_116_31922_265 Sorgh... 176 5e-043
gb|CW192233.1|CW192233 104_614_11178915_116_36943_006 Sorgh... 175 7e-043
gb|CX608981.1|CX608981 ANR1_10_A01.b1_A002 Anaerobic roots ... 171 1e-041
gb|CW117897.1|CW117897 104_494_11107909_148_34622_061 Sorgh... 168 9e-041
gb|CW089034.1|CW089034 104_434_10948469_114_32601_027 Sorgh... 100 2e-040
gb|CW280823.1|CW280823 104_756_11407836_148_35454_044 Sorgh... 111 4e-040
gb|CW241950.1|CW241950 104_701_11219058_116_37554_073 Sorgh... 94 4e-040
gb|CW340402.1|CW340402 104_841_11485781_116_36146_023 Sorgh... 94 5e-040
gb|CW441491.1|CW441491 fsbb001f160k16f0 Sorghum methylation... 126 9e-040
gb|CW172749.1|CW172749 104_584_11156458_148_36543_045 Sorgh... 127 3e-039
gb|CW340403.1|CW340403 104_841_11485781_148_36147_023 Sorgh... 100 4e-038
gb|CD203710.1|CD203710 HS1_1_D09.b1_A012 Heat-shocked seedl... 126 4e-038
gb|CN125758.1|CN125758 RHOH1_13_D02.b1_A002 Acid- and alkal... 126 1e-037
gb|CW280822.1|CW280822 104_756_11407836_116_35450_044 Sorgh... 94 3e-037
gb|CN138851.1|CN138851 OX1_14_H09.b1_A002 Oxidatively-stres... 152 6e-036
gb|CD228200.1|CD228200 CCC1_6_B10.b1_A007 Callus culture/ce... 124 1e-035
gb|CX609223.1|CX609223 ANR1_11_H09.b1_A002 Anaerobic roots ... 126 2e-035
gb|CD233006.1|CD233006 SS1_11_H04.b1_A012 Salt-stressed see... 126 2e-035
gb|CF486088.1|CF486088 POL1_35_D06.g1_A002 Pollen Sorghum b... 125 8e-035
gb|CW413647.1|CW413647 fsbb001f112o08k0 Sorghum methylation... 97 8e-034
gb|AW287387.2|AW287387 LG1_303_C07.b1_A002 Light Grown 1 (L... 126 3e-033
gb|CW339306.1|CW339306 104_840_11485203_148_36139_016 Sorgh... 127 8e-032
gb|BE361683.1|BE361683 DG1_81_F09.g1_A002 Dark Grown 1 (DG1... 134 1e-030
gb|CW172299.1|CW172299 104_583_11156215_148_36534_024 Sorgh... 132 7e-030
gb|CW433383.1|CW433383 fsbb001f148j05f0 Sorghum methylation... 95 6e-029
gb|CW241951.1|CW241951 104_701_11219058_148_37553_073 Sorgh... 95 6e-029
gb|CW355046.1|CW355046 fsbb001f019i07k0 Sorghum methylation... 128 9e-029
gb|CX606104.1|CX606104 ANR1_1_D12.b1_A002 Anaerobic roots S... 128 9e-029
gb|CW349542.1|CW349542 fsbb001f010h01f0 Sorghum methylation... 126 4e-028
gb|CD432457.1|CD432457 ETH1_30_A08.b1_A002 Ethylene-treated... 126 4e-028
gb|CW261864.1|CW261864 104_729_11229744_148_35206_094 Sorgh... 106 2e-027
gb|CW152394.1|CW152394 104_553_11144468_116_36324_070 Sorgh... 123 4e-027
gb|CW152395.1|CW152395 104_553_11144468_148_36328_070 Sorgh... 123 4e-027
gb|CD203831.1|CD203831 HS1_2_G09.b1_A012 Heat-shocked seedl... 123 4e-027
gb|CW087491.1|CW087491 104_432_10947663_114_32550_062 Sorgh... 51 5e-026
gb|CW112880.1|CW112880 104_486_11105136_116_34548_082 Sorgh... 119 5e-026
gb|CW261863.1|CW261863 104_729_11229744_116_35210_094 Sorgh... 109 8e-026
gb|CW405176.1|CW405176 fsbb001f097k01k0 Sorghum methylation... 65 2e-025
gb|CW443774.1|CW443774 fsbb001f164a20k0 Sorghum methylation... 117 2e-025
gb|CW200385.1|CW200385 104_625_11184038_148_36863_049 Sorgh... 62 4e-025
gb|CD231524.1|CD231524 SS1_22_A05.b1_A012 Salt-stressed see... 116 6e-025
gb|CW216947.1|CW216947 104_650_11195395_116_37129_080 Sorgh... 115 1e-024
gb|CL150595.1|CL150595 104_332_10778646_114_31357_198 Sorgh... 114 2e-024
gb|CW221570.1|CW221570 104_656_11197980_116_37169_036 Sorgh... 84 2e-024
gb|CL161408.1|CL161408 104_352_10805702_114_31826_374 Sorgh... 84 2e-024
gb|CW062189.1|CW062189 104_307_10521202_5_30083 Sorghum met... 84 2e-024
gb|CW432733.1|CW432733 fsbb001f147j17k0 Sorghum methylation... 81 3e-024
gb|CW350958.1|CW350958 fsbb001f012i07k0 Sorghum methylation... 90 6e-024
gb|BF421213.1|BF421213 FM1_6_H03.b1_A003 Floral-Induced Mer... 108 1e-022
gb|CW450958.1|CW450958 fsbb001f189n08k0 Sorghum methylation... 57 1e-021
gb|CF486010.1|CF486010 POL1_35_D06.b1_A002 Pollen Sorghum b... 105 1e-021
gb|CW230595.1|CW230595 104_679_11210649_148_37483_039 Sorgh... 51 2e-021
gb|CW463110.1|CW463110 fsbb001f211i20f0 Sorghum methylation... 104 2e-021
>gb|BG357676.1|BG357676 OV2_32_H07.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 653
Score = 381 bits (827), Expect(2) = e-107
Identities = 152/160 (95%), Positives = 156/160 (97%)
Frame = -2 / +1
Query: 728 QPRKPMANQANIITAQGRRDKRSVGGTVLHNCTIEPHPDFKEEAGGKIRTYLARPWKEYS 549
QPRKPM NQANIITAQGRRDKRSVGGTVLHNCTIEPHPDFK +AGGKI TYLARPWKEYS
Sbjct: 1 QPRKPMPNQANIITAQGRRDKRSVGGTVLHNCTIEPHPDFKADAGGKIATYLARPWKEYS 180
Query: 548 RTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKWGGIKTVTYEE 369
RT+YIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRG GADMSKRAKWGGIKTVTYEE
Sbjct: 181 RTLYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGAGADMSKRAKWGGIKTVTYEE 360
Query: 368 AQKEFTVETFIQGQQFIPKFGVPFIPGLLPQEQKGRTH*S 249
AQKEFTVETFIQGQQFIPK+GVPFIPGLLPQEQ+GRTH*S
Sbjct: 361 AQKEFTVETFIQGQQFIPKWGVPFIPGLLPQEQQGRTH*S 480
Score = 350 bits (759), Expect(2) = 5e-097
Identities = 144/159 (90%), Positives = 147/159 (92%)
Frame = +1 / -1
Query: 250 DQCVLPFCSCGSNPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAP 429
DQCVLP CSCGSNPGMNGTP+ GMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAP
Sbjct: 479 DQCVLPCCSCGSNPGMNGTPHFGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAP 300
Query: 430 SPRLSTSA*KSVSRPKSPFHSSQPLGSMKPPMSFWM*IVREYSFQGRARYVRIFPPASSL 609
+PRLSTSA*KSVSRPKSPFHSS PLGSMKPPMSFWM* VREYSF G AR V I PPAS+L
Sbjct: 299 APRLSTSA*KSVSRPKSPFHSSHPLGSMKPPMSFWM*SVREYSFHGLAR*VAILPPASAL 120
Query: 610 KSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRG 726
KSG GSMVQLCSTVPPTERLSRRPCAVMMLAW MGFRG
Sbjct: 119 KSGCGSMVQLCSTVPPTERLSRRPCAVMMLAWLGMGFRG 3
Score = 103 bits (219), Expect(4) = 2e-036
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = -1 / +3
Query: 393 HQDRHLRGGAEGVHRGDLHPGAAVHPQVRGAVHPGIAAAGAKRQDALII 247
HQDRHLRGGAEGVHR DLHPG AVHP+V GA+H GIAAAGA R+DALII
Sbjct: 336 HQDRHLRGGAEGVHRRDLHPGTAVHPKVGGAIHTGIAAAGATRKDALII 482
Score = 41.8 bits (85), Expect(4) = 2e-036
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -1 / +3
Query: 615 GLQGGSRREDPHVPGAALEGVLPD 544
GLQG RR+D H+P A+EGVLPD
Sbjct: 114 GLQGRRRRQDRHLPRQAMEGVLPD 185
Score = 39.6 bits (80), Expect(4) = 2e-036
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -1 / +3
Query: 504 QGLARVERRLRPRDALL 454
QG+ARVERRLRPRDALL
Sbjct: 225 QGMARVERRLRPRDALL 275
Score = 28.1 bits (55), Expect(2) = e-107
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1 / +3
Query: 162 PAH*YVHCTLVFDFPIFFLFSFV 94
P +*YVHCTLV + +F FV
Sbjct: 582 PTY*YVHCTLVVFRHLPSIFCFV 650
Score = 26.3 bits (51), Expect(2) = 5e-097
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2 / -2
Query: 95 TKEKRKKIGKSNTRVQWTY*WAG 163
TK+K ++ TRVQWTY* G
Sbjct: 649 TKQKILGK*RNTTRVQWTY**VG 581
Score = 25.4 bits (49), Expect(4) = 2e-036
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2 / +1
Query: 194 LDLHFSESPPAQPTNMSTVL* 132
L H P+ PTNMSTVL*
Sbjct: 550 LQRHRLTPRPSPPTNMSTVL* 612
>gb|BG049225.1|BG049225 OV1_17_B10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 661
Score = 215 bits (464), Expect(2) = 5e-097
Identities = 81/135 (60%), Positives = 104/135 (77%)
Frame = -2 / +3
Query: 608 KEEAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGD 429
K GK+RT+L RPWKE+SRT+YIQ++IGGFIDPKGWL W GDFGL T +YAEV+NRG
Sbjct: 240 KSAGDGKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGA 419
Query: 428 GADMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLLPQEQKGRTH*S 249
GAD SKR KW G+K +TY+ A +++TVE+FIQGQ ++P+ GVPFI GLLPQ Q GR H*
Sbjct: 420 GADTSKRVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFILGLLPQNQSGRIH*R 599
Query: 248 SSFQFASLTHYYHLI 204
+++ H + L+
Sbjct: 600 ATWALTCTYHGFSLL 644
Score = 161 bits (346), Expect(2) = 5e-097
Identities = 60/83 (72%), Positives = 73/83 (87%)
Frame = -2 / +3
Query: 842 QDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKR 663
QDTLYTH RQ++R+C +TGTIDFIFGN+QVV QNCLIQ RK M NQ NI+TAQGR+++R
Sbjct: 3 QDTLYTHTSRQYYRECVITGTIDFIFGNAQVVFQNCLIQVRKCMDNQQNIVTAQGRKERR 182
Query: 662 SVGGTVLHNCTIEPHPDFKEEAG 594
S GGTV+HNCTIEPHP+F++ AG
Sbjct: 183 SAGGTVIHNCTIEPHPEFEKSAG 251
Score = 160 bits (344), Expect(2) = 1e-068
Identities = 72/114 (63%), Positives = 79/114 (69%)
Frame = +1 / -1
Query: 253 QCVLPFCSCGSNPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPS 432
QC+LP CGS+P MNGTP+ G C PWMK+STV A *V L P HL RLL+SAP+
Sbjct: 595 QCILPDWFCGSSPRMNGTPSCGSQCWPWMKLSTVYFCSACW*VMFLTPLHLTRLLVSAPA 416
Query: 433 PRLSTSA*KSVSRPKSPFHSSQPLGSMKPPMSFWM*IVREYSFQGRARYVRIFP 594
PR STSA* V RPKSP H S PLGSMKPP+S WM* VRE SF GR R V P
Sbjct: 415 PRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPRKVLSLP 254
Score = 121 bits (259), Expect(2) = 1e-068
Identities = 52/83 (62%), Positives = 56/83 (67%)
Frame = +1 / -1
Query: 595 PASSLKSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMK 774
PA SG GSMVQL TVPP + LS RPCAV M W +M R W+RQF +TT LPKMK
Sbjct: 250 PALFSNSGCGSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMK 71
Query: 775 SMVPVTRQSRKNCRCACVYSVSW 843
SMVPV SR CR CVYSVSW
Sbjct: 70 SMVPVMTHSR*YCRLVCVYSVSW 2
Score = 64.3 bits (134), Expect(3) = 6e-023
Identities = 26/39 (66%), Positives = 27/39 (69%)
Frame = -1 / +2
Query: 843 PGHAVHARAAAVLPRLPGDRHHRLHLRQLPGGAAELPDP 727
PGHAVHA AVLPR+ HHRLHLRQ GG ELP P
Sbjct: 2 PGHAVHAHEPAVLPRVRHHGHHRLHLRQRAGGVPELPHP 118
Score = 59.3 bits (123), Expect(3) = 6e-023
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = -1 / +2
Query: 390 QDRHLRGGAEGVHRGDLHPGAAVHPQVRGAVHPGIAAAGAKRQDAL 253
Q+ HL A VHRG+LHPG A+ P R A+HPG AAA QD L
Sbjct: 458 QEHHLPARAAEVHRGELHPGPALAPTARRAIHPGAAAAEPVWQDTL 595
Score = 26.3 bits (51), Expect(3) = 6e-023
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1 / +2
Query: 504 QGLARVERRLRPRDALL 454
QG+A V RRLRP+ LL
Sbjct: 344 QGVAAVARRLRPQHLLL 394
>gb|CW192234.1|CW192234 104_614_11178915_148_36944_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11178915, DNA
sequence
Length = 655
Score = 215 bits (465), Expect(2) = 5e-095
Identities = 80/122 (65%), Positives = 100/122 (81%)
Frame = -2 / -2
Query: 608 KEEAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGD 429
K GK+RT+L RPWKE+SRT+YIQ++IGGFIDPKGWL W GDFGL T +YAEV+NRG
Sbjct: 426 KSAGDGKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGA 247
Query: 428 GADMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLLPQEQKGRTH*S 249
GAD SKR KW G+K +TY+ A +++TVE+FIQGQ ++P+ GVPFIPGLLPQ Q GR H*
Sbjct: 246 GADTSKRVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFIPGLLPQNQSGRIH*R 67
Query: 248 SS 243
++
Sbjct: 66 AT 61
Score = 164 bits (352), Expect(2) = 4e-067
Identities = 73/114 (64%), Positives = 80/114 (70%)
Frame = +1 / +2
Query: 253 QCVLPFCSCGSNPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPS 432
QC+LP CGS+PGMNGTP+ G C PWMK+STV A *V L P HL RLL+SAP+
Sbjct: 71 QCILPDWFCGSSPGMNGTPSCGSQCWPWMKLSTVYFCSACW*VMFLTPLHLTRLLVSAPA 250
Query: 433 PRLSTSA*KSVSRPKSPFHSSQPLGSMKPPMSFWM*IVREYSFQGRARYVRIFP 594
PR STSA* V RPKSP H S PLGSMKPP+S WM* VRE SF GR R V P
Sbjct: 251 PRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPRKVLSLP 412
Score = 154 bits (330), Expect(2) = 5e-095
Identities = 57/80 (71%), Positives = 70/80 (87%)
Frame = -2 / -2
Query: 833 LYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRSVG 654
LYTH RQ++R+C +TGTIDFIFGN+QVV QNCLIQ RK M NQ NI+TAQGR+++RS G
Sbjct: 654 LYTHTSRQYYRECVITGTIDFIFGNAQVVFQNCLIQVRKCMDNQQNIVTAQGRKERRSAG 475
Query: 653 GTVLHNCTIEPHPDFKEEAG 594
GTV+HNCTIEPHP+F++ AG
Sbjct: 474 GTVIHNCTIEPHPEFEKSAG 415
Score = 112 bits (240), Expect(2) = 4e-067
Identities = 49/80 (61%), Positives = 53/80 (66%)
Frame = +1 / +2
Query: 595 PASSLKSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMK 774
PA SG GSMVQL TVPP + LS RPCAV M W +M R W+RQF +TT LPKMK
Sbjct: 416 PALFSNSGCGSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMK 595
Query: 775 SMVPVTRQSRKNCRCACVYS 834
SMVPV SR CR CVYS
Sbjct: 596 SMVPVMTHSR*YCRLVCVYS 655
>gb|CW328078.1|CW328078 104_824_11479103_148_35988_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479103, DNA
sequence
Length = 666
Score = 215 bits (465), Expect(2) = 4e-085
Identities = 80/122 (65%), Positives = 100/122 (81%)
Frame = -2 / +1
Query: 608 KEEAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGD 429
K GK+RT+L RPWKE+SRT+YIQ++IGGFIDPKGWL W GDFGL T +YAEV+NRG
Sbjct: 175 KSAGDGKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGA 354
Query: 428 GADMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLLPQEQKGRTH*S 249
GAD SKR KW G+K +TY+ A +++TVE+FIQGQ ++P+ GVPFIPGLLPQ Q GR H*
Sbjct: 355 GADTSKRVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFIPGLLPQNQSGRIH*R 534
Query: 248 SS 243
++
Sbjct: 535 AT 540
Score = 164 bits (352), Expect(2) = 3e-059
Identities = 73/114 (64%), Positives = 80/114 (70%)
Frame = +1 / -2
Query: 253 QCVLPFCSCGSNPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPS 432
QC+LP CGS+PGMNGTP+ G C PWMK+STV A *V L P HL RLL+SAP+
Sbjct: 530 QCILPDWFCGSSPGMNGTPSCGSQCWPWMKLSTVYFCSACW*VMFLTPLHLTRLLVSAPA 351
Query: 433 PRLSTSA*KSVSRPKSPFHSSQPLGSMKPPMSFWM*IVREYSFQGRARYVRIFP 594
PR STSA* V RPKSP H S PLGSMKPP+S WM* VRE SF GR R V P
Sbjct: 350 PRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPRKVLSLP 189
Score = 121 bits (258), Expect(2) = 4e-085
Identities = 46/62 (74%), Positives = 55/62 (88%)
Frame = -2 / +1
Query: 779 IDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRSVGGTVLHNCTIEPHPDFKEE 600
IDFIFGN+QVV QNCLIQ RK M NQ NI+TAQGR+++RS GGTV+HNCTIEPHP+F++
Sbjct: 1 IDFIFGNAQVVFQNCLIQVRKCMDNQQNIVTAQGRKERRSAGGTVIHNCTIEPHPEFEKS 180
Query: 599 AG 594
AG
Sbjct: 181 AG 186
Score = 86.3 bits (182), Expect(2) = 3e-059
Identities = 37/61 (60%), Positives = 41/61 (67%)
Frame = +1 / -2
Query: 595 PASSLKSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMK 774
PA SG GSMVQL TVPP + LS RPCAV M W +M R W+RQF +TT LPKMK
Sbjct: 185 PALFSNSGCGSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMK 6
Query: 775 S 777
S
Sbjct: 5 S 3
>gb|BG048275.1|BG048275 OV1_16_B07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 170 bits (365), Expect(2) = 5e-083
Identities = 63/86 (73%), Positives = 76/86 (88%)
Frame = -2 / +1
Query: 851 DGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRR 672
DGYQDTLYTH RQ++R+C +TGTIDFIFGN+QVV QNCLIQ RK M NQ NI+TAQGR+
Sbjct: 1 DGYQDTLYTHTSRQYYRECVITGTIDFIFGNAQVVFQNCLIQVRKCMDNQQNIVTAQGRK 180
Query: 671 DKRSVGGTVLHNCTIEPHPDFKEEAG 594
++RS GGTV+HNCTIEPHP+F++ AG
Sbjct: 181 ERRSAGGTVIHNCTIEPHPEFEKSAG 258
Score = 160 bits (343), Expect(2) = 5e-083
Identities = 58/89 (65%), Positives = 73/89 (82%)
Frame = -2 / +1
Query: 608 KEEAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGD 429
K GK+RT+L RPWKE+SRT+YIQ++IGGFIDPKGWL W GDFGL T +YAEV+NRG
Sbjct: 247 KSAGDGKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGA 426
Query: 428 GADMSKRAKWGGIKTVTYEEAQKEFTVET 342
GAD SKR KW G+K +TY+ A +++TVE+
Sbjct: 427 GADTSKRVKWRGVKNITYQHALQKYTVES 513
Score = 122 bits (262), Expect(2) = 3e-053
Identities = 53/85 (62%), Positives = 57/85 (67%)
Frame = +1 / -2
Query: 595 PASSLKSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMK 774
PA SG GSMVQL TVPP + LS RPCAV M W +M R W+RQF +TT LPKMK
Sbjct: 257 PALFSNSGCGSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMK 78
Query: 775 SMVPVTRQSRKNCRCACVYSVSW*P 849
SMVPV SR CR CVYSVSW P
Sbjct: 77 SMVPVMTHSR*YCRLVCVYSVSWYP 3
Score = 107 bits (229), Expect(2) = 3e-053
Identities = 53/84 (63%), Positives = 57/84 (67%)
Frame = +1 / -2
Query: 343 VSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSVSRPKSPFHSSQPLGSMKPP 522
+STV A *V L P HL RLL+SAP+PR STSA* V RPKSP H S PLGSMKPP
Sbjct: 512 LSTVYFCSACW*VMFLTPLHLTRLLVSAPAPRFSTSA**QVLRPKSPSHGSHPLGSMKPP 333
Query: 523 MSFWM*IVREYSFQGRARYVRIFP 594
+S WM* VRE SF GR R V P
Sbjct: 332 ISDWM*SVRECSFHGRPRKVLSLP 261
>gb|BG240770.1|BG240770 OV1_38_A10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 220 bits (474), Expect(2) = 2e-076
Identities = 82/135 (60%), Positives = 105/135 (77%)
Frame = -2 / +3
Query: 608 KEEAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGD 429
K GK+RT+L RPWKE+SRT+YIQ++IGGFIDPKGWL W GDFGL T +YAEV+NRG
Sbjct: 132 KSAGDGKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGA 311
Query: 428 GADMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLLPQEQKGRTH*S 249
GAD SKR KW G+K +TY+ A +++TVE+FIQGQ ++P+ GVPFIPGLLPQ Q GR H*
Sbjct: 312 GADTSKRVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFIPGLLPQNQSGRIH*R 491
Query: 248 SSFQFASLTHYYHLI 204
+++ H + L+
Sbjct: 492 ATWALTCTYHGFSLL 536
Score = 164 bits (352), Expect(2) = 9e-053
Identities = 73/114 (64%), Positives = 80/114 (70%)
Frame = +1 / -3
Query: 253 QCVLPFCSCGSNPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPS 432
QC+LP CGS+PGMNGTP+ G C PWMK+STV A *V L P HL RLL+SAP+
Sbjct: 487 QCILPDWFCGSSPGMNGTPSCGSQCWPWMKLSTVYFCSACW*VMFLTPLHLTRLLVSAPA 308
Query: 433 PRLSTSA*KSVSRPKSPFHSSQPLGSMKPPMSFWM*IVREYSFQGRARYVRIFP 594
PR STSA* V RPKSP H S PLGSMKPP+S WM* VRE SF GR R V P
Sbjct: 307 PRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPRKVLSLP 146
Score = 88.1 bits (186), Expect(2) = 2e-076
Identities = 33/47 (70%), Positives = 41/47 (87%)
Frame = -2 / +3
Query: 734 LIQPRKPMANQANIITAQGRRDKRSVGGTVLHNCTIEPHPDFKEEAG 594
LIQ RK M NQ NI+TAQGR+++RS GGTV+HNCTIEPHP+F++ AG
Sbjct: 3 LIQVRKCMDNQQNIVTAQGRKERRSAGGTVIHNCTIEPHPEFEKSAG 143
Score = 64.8 bits (135), Expect(2) = 9e-053
Identities = 27/47 (57%), Positives = 30/47 (63%)
Frame = +1 / -3
Query: 595 PASSLKSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIR 735
PA SG GSMVQL TVPP + LS RPCAV M W +M R W+R
Sbjct: 142 PALFSNSGCGSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMR 2
>gb|BG411772.1|BG411772 OV2_37_H05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 594
Score = 215 bits (465), Expect(2) = 1e-075
Identities = 80/122 (65%), Positives = 100/122 (81%)
Frame = -2 / +3
Query: 608 KEEAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGD 429
K GK+RT+L RPWKE+SRT+YIQ++IGGFIDPKGWL W GDFGL T +YAEV+NRG
Sbjct: 135 KSAGDGKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGA 314
Query: 428 GADMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLLPQEQKGRTH*S 249
GAD SKR KW G+K +TY+ A +++TVE+FIQGQ ++P+ GVPFIPGLLPQ Q GR H*
Sbjct: 315 GADTSKRVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFIPGLLPQNQSGRIH*R 494
Query: 248 SS 243
++
Sbjct: 495 AT 500
Score = 164 bits (352), Expect(2) = 2e-052
Identities = 73/114 (64%), Positives = 80/114 (70%)
Frame = +1 / -3
Query: 253 QCVLPFCSCGSNPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPS 432
QC+LP CGS+PGMNGTP+ G C PWMK+STV A *V L P HL RLL+SAP+
Sbjct: 490 QCILPDWFCGSSPGMNGTPSCGSQCWPWMKLSTVYFCSACW*VMFLTPLHLTRLLVSAPA 311
Query: 433 PRLSTSA*KSVSRPKSPFHSSQPLGSMKPPMSFWM*IVREYSFQGRARYVRIFP 594
PR STSA* V RPKSP H S PLGSMKPP+S WM* VRE SF GR R V P
Sbjct: 310 PRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPRKVLSLP 149
Score = 89.5 bits (189), Expect(2) = 1e-075
Identities = 33/48 (68%), Positives = 41/48 (85%)
Frame = -2 / +3
Query: 737 CLIQPRKPMANQANIITAQGRRDKRSVGGTVLHNCTIEPHPDFKEEAG 594
CLIQ RK M NQ NI+ AQGR+++RS GGTV+HNCTIEPHP+F++ AG
Sbjct: 3 CLIQVRKCMDNQQNIVPAQGRKERRSAGGTVIHNCTIEPHPEFEKSAG 146
Score = 63.8 bits (133), Expect(2) = 2e-052
Identities = 27/48 (56%), Positives = 30/48 (62%)
Frame = +1 / -3
Query: 595 PASSLKSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQ 738
PA SG GSMVQL TVPP + LS RPCA M W +M R W+RQ
Sbjct: 145 PALFSNSGCGSMVQLWMTVPPADLLSLRPCAGTMFCWLSMHLRTWMRQ 2
>gb|BE918645.1|BE918645 FM1_2_G10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 564
Score = 215 bits (465), Expect(2) = 7e-073
Identities = 80/122 (65%), Positives = 100/122 (81%)
Frame = -2 / +2
Query: 608 KEEAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGD 429
K GK+RT+L RPWKE+SRT+YIQ++IGGFIDPKGWL W GDFGL T +YAEV+NRG
Sbjct: 119 KSAGDGKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGA 298
Query: 428 GADMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLLPQEQKGRTH*S 249
GAD SKR KW G+K +TY+ A +++TVE+FIQGQ ++P+ GVPFIPGLLPQ Q GR H*
Sbjct: 299 GADTSKRVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFIPGLLPQNQSGRIH*R 478
Query: 248 SS 243
++
Sbjct: 479 AT 484
Score = 164 bits (352), Expect(2) = 2e-049
Identities = 73/114 (64%), Positives = 80/114 (70%)
Frame = +1 / -1
Query: 253 QCVLPFCSCGSNPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPS 432
QC+LP CGS+PGMNGTP+ G C PWMK+STV A *V L P HL RLL+SAP+
Sbjct: 474 QCILPDWFCGSSPGMNGTPSCGSQCWPWMKLSTVYFCSACW*VMFLTPLHLTRLLVSAPA 295
Query: 433 PRLSTSA*KSVSRPKSPFHSSQPLGSMKPPMSFWM*IVREYSFQGRARYVRIFP 594
PR STSA* V RPKSP H S PLGSMKPP+S WM* VRE SF GR R V P
Sbjct: 294 PRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPRKVLSLP 133
Score = 80.3 bits (169), Expect(2) = 7e-073
Identities = 29/43 (67%), Positives = 37/43 (86%)
Frame = -2 / +2
Query: 722 RKPMANQANIITAQGRRDKRSVGGTVLHNCTIEPHPDFKEEAG 594
RK M NQ NI+TAQ R+++RS GGTV+HNCTIEPHP+F++ AG
Sbjct: 2 RKCMHNQQNIVTAQARKERRSAGGTVIHNCTIEPHPEFEKSAG 130
Score = 53.8 bits (111), Expect(2) = 2e-049
Identities = 24/43 (55%), Positives = 25/43 (58%)
Frame = +1 / -1
Query: 595 PASSLKSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFR 723
PA SG GSMVQL TVPP + LS R CAV M W M R
Sbjct: 129 PALFSNSGCGSMVQLWMTVPPADLLSLRACAVTMFCWLCMHLR 1
>gb|CW474162.1|CW474162 fsbb001f229n21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f229n21, DNA
sequence
Length = 496
Score = 251 bits (542), Expect(2) = 3e-067
Identities = 100/104 (96%), Positives = 103/104 (99%)
Frame = -2 / -2
Query: 560 KEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKWGGIKTV 381
KEYSRT+YIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRG GADMSKRAKWGGIKTV
Sbjct: 495 KEYSRTLYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGAGADMSKRAKWGGIKTV 316
Query: 380 TYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLLPQEQKGRTH*S 249
TYEEAQKEFTVETFIQGQQFIPK+GVPFIPGLLPQEQ+GRTH*S
Sbjct: 315 TYEEAQKEFTVETFIQGQQFIPKWGVPFIPGLLPQEQQGRTH*S 184
Score = 243 bits (525), Expect(2) = 1e-064
Identities = 98/104 (94%), Positives = 100/104 (96%)
Frame = +1 / +2
Query: 250 DQCVLPFCSCGSNPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAP 429
DQCVLP CSCGSNPGMNGTP+ GMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAP
Sbjct: 185 DQCVLPCCSCGSNPGMNGTPHFGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAP 364
Query: 430 SPRLSTSA*KSVSRPKSPFHSSQPLGSMKPPMSFWM*IVREYSF 561
+PRLSTSA*KSVSRPKSPFHSS PLGSMKPPMSFWM* VREYSF
Sbjct: 365 APRLSTSA*KSVSRPKSPFHSSHPLGSMKPPMSFWM*SVREYSF 496
Score = 103 bits (219), Expect(3) = 3e-029
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = -1 / -1
Query: 393 HQDRHLRGGAEGVHRGDLHPGAAVHPQVRGAVHPGIAAAGAKRQDALII 247
HQDRHLRGGAEGVHR DLHPG AVHP+V GA+H GIAAAGA R+DALII
Sbjct: 328 HQDRHLRGGAEGVHRRDLHPGTAVHPKVGGAIHTGIAAAGATRKDALII 182
Score = 39.6 bits (80), Expect(3) = 3e-029
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -1 / -1
Query: 504 QGLARVERRLRPRDALL 454
QG+ARVERRLRPRDALL
Sbjct: 439 QGMARVERRLRPRDALL 389
Score = 26.3 bits (51), Expect(2) = 3e-067
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -1
Query: 162 PAH*YVHCTLV 130
P +*YVHCTLV
Sbjct: 82 PTY*YVHCTLV 50
Score = 25.4 bits (49), Expect(3) = 3e-029
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2 / -2
Query: 194 LDLHFSESPPAQPTNMSTVL* 132
L H P+ PTNMSTVL*
Sbjct: 114 LQRHRLTPRPSPPTNMSTVL* 52
Score = 25.4 bits (49), Expect(2) = 1e-064
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2 / +3
Query: 98 KEKRKKIGKSNTRVQWTY*WAG 163
K K+ ++ TRVQWTY* G
Sbjct: 18 KTKKTGK*RNTTRVQWTY**VG 83
>gb|BG412480.1|BG412480 OV2_34_H02.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 506
Score = 215 bits (465), Expect(2) = 7e-063
Identities = 80/122 (65%), Positives = 100/122 (81%)
Frame = -2 / +2
Query: 608 KEEAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGD 429
K GK+RT+L RPWKE+SRT+YIQ++IGGFIDPKGWL W GDFGL T +YAEV+NRG
Sbjct: 53 KSAGDGKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGA 232
Query: 428 GADMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLLPQEQKGRTH*S 249
GAD SKR KW G+K +TY+ A +++TVE+FIQGQ ++P+ GVPFIPGLLPQ Q GR H*
Sbjct: 233 GADTSKRVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFIPGLLPQNQSGRIH*R 412
Query: 248 SS 243
++
Sbjct: 413 AT 418
Score = 164 bits (352), Expect(2) = 1e-042
Identities = 73/114 (64%), Positives = 80/114 (70%)
Frame = +1 / -3
Query: 253 QCVLPFCSCGSNPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPS 432
QC+LP CGS+PGMNGTP+ G C PWMK+STV A *V L P HL RLL+SAP+
Sbjct: 408 QCILPDWFCGSSPGMNGTPSCGSQCWPWMKLSTVYFCSACW*VMFLTPLHLTRLLVSAPA 229
Query: 433 PRLSTSA*KSVSRPKSPFHSSQPLGSMKPPMSFWM*IVREYSFQGRARYVRIFP 594
PR STSA* V RPKSP H S PLGSMKPP+S WM* VRE SF GR R V P
Sbjct: 228 PRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPRKVLSLP 67
Score = 46.9 bits (96), Expect(2) = 7e-063
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = -2 / +2
Query: 656 GGTVLHNCTIEPHPDFKEEAG 594
GGTV+HNCTIEPHP F++ AG
Sbjct: 2 GGTVIHNCTIEPHPLFEKSAG 64
Score = 30.9 bits (61), Expect(2) = 1e-042
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = +1 / -3
Query: 595 PASSLKSGWGSMVQLCSTVPP 657
PA SG GSMVQL TVPP
Sbjct: 63 PALFSNSGCGSMVQLWMTVPP 1
>gb|CW355045.1|CW355045 fsbb001f019i07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f019i07, DNA
sequence
Length = 717
Score = 241 bits (521), Expect = 1e-062
Identities = 90/193 (46%), Positives = 121/193 (62%)
Frame = -2 / +3
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
YQC+F+ YQDTLYTH+ RQF+R C V GT+D++FGN+ VV Q+C + R PM Q+N +T
Sbjct: 72 YQCSFEAYQDTLYTHSLRQFYRGCDVYGTVDYVFGNAAVVFQDCNLYSRLPMQGQSNTVT 251
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPDFKEEAGGKIRTYLARPWKEYSRTIYIQNDIGGFID 507
AQGR D GT L CT+ P+ + TYL RPWK YSRT+ +Q+++ +D
Sbjct: 252 AQGRTDPNQNTGTTLQGCTVAAAPELAANTAFAVATYLGRPWKLYSRTVIMQSEVDALVD 431
Query: 506 PKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQ 327
P GW+ W+GD+ L TLFYAE +N G GAD S+R W G + FTV + G
Sbjct: 432 PAGWMPWDGDYALSTLFYAEYNNSGPGADTSRRVAWPGFHVLNGTADAANFTVGNMVLGD 611
Query: 326 QFIPKFGVPFIPG 288
++P+ GVPF G
Sbjct: 612 FWLPQTGVPFTSG 650
Score = 131 bits (280), Expect = 2e-029
Identities = 82/194 (42%), Positives = 95/194 (48%)
Frame = +1 / -3
Query: 286 NPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSV 465
+P +NGTP G P + TV ++ + P H LL+SAP P L SA*KSV
Sbjct: 652 DPLVNGTPVWGSQKSPSTMLPTVKLAASAVPFSTWKPGHATLLLVSAPGPELLYSA*KSV 473
Query: 466 SRPKSPFHSSQPLGSMKPPMSFWM*IVREYSFQGRARYVRIFPPASSLKSGWGSMVQLCS 645
SP H P GS S M VRE SF GR R V + SG + VQ S
Sbjct: 472 LSA*SPSHGIHPAGSTSASTSDCMITVRE*SFHGRPR*VATANAVLAASSGAAATVQPWS 293
Query: 646 TVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPVTRQSRKNCRCAC 825
VP S RPCAV +L +G Q +TT LP S VP T Q R NCR C
Sbjct: 292 VVPVFWFGSVRPCAVTVLLCPCIGSLE*RLQSWNTTAALPNT*STVP*TSQPR*NCRREC 113
Query: 826 VYSVSW*PSKVHW* 867
VYSVSW SK+HW*
Sbjct: 112 VYSVSWYASKLHW* 71
>gb|BG239895.1|BG239895 OV1_30_D03.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 455
Score = 215 bits (464), Expect(2) = 1e-060
Identities = 81/135 (60%), Positives = 104/135 (77%)
Frame = -2 / +3
Query: 608 KEEAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGD 429
K GK+RT+L RPWKE+SRT+YIQ++IGGFIDPKGWL W GDFGL T +YAEV+NRG
Sbjct: 42 KSAGDGKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGA 221
Query: 428 GADMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLLPQEQKGRTH*S 249
GAD SKR KW G+K +TY+ A +++TVE+FIQGQ ++P+ GVPFI GLLPQ Q GR H*
Sbjct: 222 GADTSKRVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFILGLLPQNQSGRIH*R 401
Query: 248 SSFQFASLTHYYHLI 204
+++ H + L+
Sbjct: 402 ATWALTCTYHGFSLL 446
Score = 160 bits (344), Expect(2) = 3e-038
Identities = 72/114 (63%), Positives = 79/114 (69%)
Frame = +1 / -2
Query: 253 QCVLPFCSCGSNPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPS 432
QC+LP CGS+P MNGTP+ G C PWMK+STV A *V L P HL RLL+SAP+
Sbjct: 397 QCILPDWFCGSSPRMNGTPSCGSQCWPWMKLSTVYFCSACW*VMFLTPLHLTRLLVSAPA 218
Query: 433 PRLSTSA*KSVSRPKSPFHSSQPLGSMKPPMSFWM*IVREYSFQGRARYVRIFP 594
PR STSA* V RPKSP H S PLGSMKPP+S WM* VRE SF GR R V P
Sbjct: 217 PRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPRKVLSLP 56
Score = 40.0 bits (81), Expect(2) = 1e-060
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -2 / +3
Query: 644 LHNCTIEPHPDFKEEAG 594
+HNCTIEPHP+F++ AG
Sbjct: 3 IHNCTIEPHPEFEKSAG 53
Score = 21.7 bits (41), Expect(2) = 3e-038
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1 / -2
Query: 595 PASSLKSGWGSMVQL 639
PA SG GSMVQL
Sbjct: 52 PALFSNSGCGSMVQL 8
>gb|BG412481.1|BG412481 OV2_34_H03.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 420
Score = 156 bits (336), Expect(2) = 5e-057
Identities = 59/93 (63%), Positives = 72/93 (77%)
Frame = -2 / +3
Query: 608 KEEAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGD 429
K GK+RT+L RPWKE+SRT+YIQ++IGGFIDPKGWL W GDFGL T YAEV+NRG
Sbjct: 129 KSAGDGKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTC*YAEVENRGA 308
Query: 428 GADMSKRAKWGGIKTVTYEEAQKEFTVETFIQG 330
GAD SKR KW G+K +TY+ A +++TVE G
Sbjct: 309 GADTSKRVKWRGVKNITYQHALQKYTVELLHPG 407
Score = 105 bits (223), Expect(2) = 2e-034
Identities = 52/83 (62%), Positives = 55/83 (66%)
Frame = +1 / -3
Query: 346 STVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA*KSVSRPKSPFHSSQPLGSMKPPM 525
STV A *V L P HL RLL+SAP+PR STSA V RPKSP H S PLGSMKPP+
Sbjct: 391 STVYFCSACW*VMFLTPLHLTRLLVSAPAPRFSTSAY*QVLRPKSPSHGSHPLGSMKPPI 212
Query: 526 SFWM*IVREYSFQGRARYVRIFP 594
S WM* VRE SF GR R V P
Sbjct: 211 SDWM*SVRECSFHGRPRKVLSLP 143
Score = 86.3 bits (182), Expect(2) = 5e-057
Identities = 32/46 (69%), Positives = 40/46 (86%)
Frame = -2 / +3
Query: 731 IQPRKPMANQANIITAQGRRDKRSVGGTVLHNCTIEPHPDFKEEAG 594
IQ RK M NQ NI+TAQGR+++RS GGTV+HNCTIEPHP+F++ AG
Sbjct: 3 IQVRKCMDNQQNIVTAQGRKERRSAGGTVIHNCTIEPHPEFEKSAG 140
Score = 62.5 bits (130), Expect(2) = 2e-034
Identities = 26/46 (56%), Positives = 29/46 (63%)
Frame = +1 / -3
Query: 595 PASSLKSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWI 732
PA SG GSMVQL TVPP + LS RPCAV M W +M R W+
Sbjct: 139 PALFSNSGCGSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWM 2
>gb|CW339305.1|CW339305 104_840_11485203_116_36138_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485203, DNA
sequence
Length = 626
Score = 126 bits (270), Expect(2) = 2e-055
Identities = 46/106 (43%), Positives = 66/106 (62%)
Frame = -2 / -2
Query: 602 EAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGA 423
++ +TYL RPWK+YSRT+++Q+++ I P GWLEW+G+F L+TL+Y E N G GA
Sbjct: 382 QSSSSTKTYLGRPWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGA 203
Query: 422 DMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
S R KW G + +T FTV +FI G ++ +PF GL
Sbjct: 202 GTSGRVKWKGYRVITSAAEASAFTVGSFIDGDVWLAGTSIPFTTGL 65
Score = 111 bits (236), Expect(2) = 2e-055
Identities = 43/84 (51%), Positives = 55/84 (65%)
Frame = -2 / -2
Query: 848 GYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRD 669
GYQDTLY H+ RQFFR+C + GTIDF+ GN+ VVLQ C + RKP+ NQ+NI TAQGR D
Sbjct: 625 GYQDTLYVHSLRQFFRECDMYGTIDFVSGNAAVVLQGCNLYARKPLPNQSNIFTAQGRED 446
Query: 668 KRSVGGTVLHNCTIEPHPDFKEEA 597
G +H C + D + +
Sbjct: 445 PNQNTGISIHRCKVAAAADLLQSS 374
Score = 88.6 bits (187), Expect(2) = 4e-032
Identities = 37/60 (61%), Positives = 39/60 (65%)
Frame = +1 / +3
Query: 670 SRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPVTRQSRKNCRCACVYSVSW*P 849
S RPCAV ML W G R + Q CSTT LP+ KSMVP SRKNCR C YSVSW*P
Sbjct: 447 SSRPCAVKMLLWLGSGLRAYRLQPCSTTAALPETKSMVPYMSHSRKNCRRECTYSVSW*P 626
Score = 71.2 bits (149), Expect(2) = 4e-032
Identities = 41/104 (39%), Positives = 49/104 (47%)
Frame = +1 / +3
Query: 277 CGSNPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA* 456
C P + G P MK TVN+ +++ V P HL R + AP P S *
Sbjct: 57 CAHKPVVKGMDVPASQTSPSMKEPTVNALASAALVMTRYPFHLTRPEVPAPGPVFMYSP* 236
Query: 457 KSVSRPKSPFHSSQPLGSMKPPMSFWM*IVREYSFQGRARYVRI 588
SVS K P HSSQP G+M S VREY F GR R V +
Sbjct: 237 *SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VLV 368
>gb|CW155885.1|CW155885 104_558_11146378_148_36365_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146378, DNA
sequence
Length = 728
Score = 125 bits (268), Expect(2) = 3e-053
Identities = 48/82 (58%), Positives = 58/82 (70%)
Frame = -2 / -1
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
+ C F+GYQDTLY HA RQFFR+C V GT+DFIFGNS + QNCL+ RKP +Q+N++T
Sbjct: 698 FNCRFEGYQDTLYVHANRQFFRNCEVLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVT 519
Query: 686 AQGRRDKRSVGGTVLHNCTIEP 621
AQGR D G VL C I P
Sbjct: 518 AQGRTDPNMPTGIVLQGCRIVP 453
Score = 105 bits (223), Expect(2) = 3e-053
Identities = 38/75 (50%), Positives = 51/75 (68%)
Frame = -2 / -1
Query: 590 KIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSK 411
++ +YL RPWKEY+RT+ +++ IG I P+GW EW GD GL+TL+YAE N G GA SK
Sbjct: 425 QVPSYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSK 246
Query: 410 RAKWGGIKTVTYEEA 366
R W G + + EA
Sbjct: 245 RVNWPGYRVIGQAEA 201
Score = 97.3 bits (206), Expect(2) = 2e-032
Identities = 45/77 (58%), Positives = 50/77 (64%)
Frame = +1 / +1
Query: 622 GSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPVTRQS 801
G+M Q ST+P S PCAV ML W + G R IRQF ++ ELPKMKS VP T Q
Sbjct: 454 GTMRQPWSTIPVGMLGSVLPCAVTMLDWLSPGLRTVIRQFWNSAAELPKMKSTVPSTSQL 633
Query: 802 RKNCRCACVYSVSW*PS 852
RKNCR AC YSVSW PS
Sbjct: 634 RKNCRFACTYSVSWYPS 684
Score = 63.8 bits (133), Expect(2) = 2e-032
Identities = 31/61 (50%), Positives = 37/61 (60%)
Frame = +1 / +1
Query: 394 PPHLARLLMSAPSPRLSTSA*KSVSRPKSPFHSSQPLGSMKPPMSFWM*IVREYSFQGRA 573
P L LL+ AP P L+ SA* SV RP+SP HS+ P G M+ PM + V YSF GR
Sbjct: 229 PGQLTLLLVPAPGPVLAYSA**SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRP 408
Query: 574 R 576
R
Sbjct: 409 R 411
>gb|CW276959.1|CW276959 104_750_11405768_116_35395_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405768, DNA
sequence
Length = 617
Score = 205 bits (442), Expect = 8e-052
Identities = 80/174 (45%), Positives = 105/174 (60%)
Frame = -2 / -2
Query: 806 FRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRSVGGTVLHNCTI 627
+R+C V+GT+DF+FGN+ VLQ C + R P+ Q N +TAQGR D GT LH C +
Sbjct: 616 YRECFVSGTVDFVFGNAAAVLQGCALAARLPLRGQQNAVTAQGREDPNQNTGTSLHRCRV 437
Query: 626 EPHPDFKEEAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAE 447
P PD AG T+L RPWK YSRT+ + + + +D +GWLEW+GDF L+TLFY E
Sbjct: 436 VPAPDLAPVAGTDFPTFLGRPWKAYSRTVVMLSYLDAHVDARGWLEWDGDFALKTLFYGE 257
Query: 446 VDNRGDGADMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
N G GA + R W G +T +FTV FIQG ++ GVP+I GL
Sbjct: 256 YQNEGPGAATAGRVNWPGYHVITDRSVAVQFTVGQFIQGGNWLNGTGVPYIEGL 95
Score = 108 bits (231), Expect = 1e-022
Identities = 72/177 (40%), Positives = 79/177 (44%)
Frame = +1 / +3
Query: 274 SCGSNPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPSPRLSTSA 453
S P M GTP P M TVN V P L R ++AP P S
Sbjct: 84 SMNQRPSM*GTPVPLSQLPP*MNWPTVNCTATLLSVMTW*PGQLTRPAVAAPGPSFWYSP 263
Query: 454 *KSVSRPKSPFHSSQPLGSMKPPMSFWM*IVREYSFQGRARYVRIFPPASSLKSGWGSMV 633
*KSV KSP HSS PL S M VRE +F GR R V PA+ +SG G+
Sbjct: 264 *KSVLSAKSPSHSSHPLASTCASRYDSMTTVRE*AFHGRPRNVGKSVPATGARSGAGTTR 443
Query: 634 QLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPVTRQSR 804
L VP S RPCAV W G R Q CST LPK KS VP T+ SR
Sbjct: 444 HLWRDVPVFWLGSSRPCAVTAFCWPRRGRRAASAQPCSTAAALPKTKSTVPDTKHSR 614
>gb|CW281478.1|CW281478 104_757_11408201_116_35463_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11408201, DNA
sequence
Length = 479
Score = 180 bits (388), Expect(2) = 1e-050
Identities = 66/91 (72%), Positives = 80/91 (87%)
Frame = -2 / +1
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C FDGYQDTLYTH RQ++R+C +TGTIDFIFGN+QVV QNCLIQ RK M NQ NI+T
Sbjct: 148 YECRFDGYQDTLYTHTSRQYYRECVITGTIDFIFGNAQVVFQNCLIQVRKCMDNQQNIVT 327
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPDFKEEAG 594
AQGR+++RS GGTV+HNCTIEPHP+F++ AG
Sbjct: 328 AQGRKERRSAGGTVIHNCTIEPHPEFEKSAG 420
Score = 127 bits (271), Expect = 3e-028
Identities = 55/89 (61%), Positives = 59/89 (66%)
Frame = +1 / -1
Query: 595 PASSLKSGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMK 774
PA SG GSMVQL TVPP + LS RPCAV M W +M R W+RQF +TT LPKMK
Sbjct: 419 PALFSNSGCGSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMK 240
Query: 775 SMVPVTRQSRKNCRCACVYSVSW*PSKVH 861
SMVPV SR CR CVYSVSW PS H
Sbjct: 239 SMVPVMTHSR*YCRLVCVYSVSWYPSNRH 153
Score = 41.4 bits (84), Expect(2) = 1e-050
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -2 / +1
Query: 608 KEEAGGKIRTYLARPWKEYSRTI 540
K GK+RT+L RPWKE+SRT+
Sbjct: 409 KSAGDGKLRTFLGRPWKEHSRTL 477
>gb|CW369334.1|CW369334 fsbb001f043l06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f043l06, DNA
sequence
Length = 712
Score = 196 bits (422), Expect = 5e-049
Identities = 70/139 (50%), Positives = 94/139 (67%)
Frame = -2 / +1
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
YQC+F+ YQDTLYTH+ RQF+R C V GT+D++FGN+ VV Q+C + R PM Q+N +T
Sbjct: 295 YQCSFEAYQDTLYTHSLRQFYRGCDVYGTVDYVFGNAAVVFQDCNLYSRLPMQGQSNTVT 474
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPDFKEEAGGKIRTYLARPWKEYSRTIYIQNDIGGFID 507
AQGR D GT L CT+ P+ + TYL RPWK YSRT+ +Q+++ +D
Sbjct: 475 AQGRTDPNQNTGTTLQGCTVAAAPELAANTAFAVATYLGRPWKLYSRTVIMQSEVDALVD 654
Query: 506 PKGWLEWNGDFGLETLFYA 450
P GW+ W+GD+ L TLFYA
Sbjct: 655 PAGWMPWDGDYALSTLFYA 711
>gb|CW281479.1|CW281479 104_757_11408201_148_35459_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11408201, DNA
sequence
Length = 593
Score = 190 bits (409), Expect = 3e-047
Identities = 71/106 (66%), Positives = 89/106 (83%)
Frame = -2 / -1
Query: 560 KEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKWGGIKTV 381
KE+SRT+YIQ++IGGFIDPKGWL W GDFGL T +YAEV+NRG GAD SKR KW G+K +
Sbjct: 587 KEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSKRVKWRGVKNI 408
Query: 380 TYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLLPQEQKGRTH*SSS 243
TY+ A +++TVE+FIQGQ ++P+ GVPFIPGLLPQ Q GR H* ++
Sbjct: 407 TYQHALQKYTVESFIQGQHWLPQLGVPFIPGLLPQNQSGRIH*RAT 270
Score = 155 bits (332), Expect = 1e-036
Identities = 68/103 (66%), Positives = 75/103 (72%)
Frame = +1 / +1
Query: 253 QCVLPFCSCGSNPGMNGTPNLGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPS 432
QC+LP CGS+PGMNGTP+ G C PWMK+STV A *V L P HL RLL+SAP+
Sbjct: 280 QCILPDWFCGSSPGMNGTPSCGSQCWPWMKLSTVYFCSACW*VMFLTPLHLTRLLVSAPA 459
Query: 433 PRLSTSA*KSVSRPKSPFHSSQPLGSMKPPMSFWM*IVREYSF 561
PR STSA* V RPKSP H S PLGSMKPP+S WM* VRE SF
Sbjct: 460 PRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSF 588
>gb|CW386938.1|CW386938 fsbb001f071b07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f071b07, DNA
sequence
Length = 617
Score = 108 bits (231), Expect(2) = 1e-046
Identities = 40/75 (53%), Positives = 53/75 (70%)
Frame = -2 / +3
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+F GYQDTLY H+ RQF+RDC V GT+DF+FG++ VLQ C + R+P Q N++T
Sbjct: 156 YRCSFAGYQDTLYAHSLRQFYRDCDVYGTVDFVFGDAAAVLQGCSLYARRPGPGQKNVVT 335
Query: 686 AQGRRDKRSVGGTVL 642
AQGR D G V+
Sbjct: 336 AQGREDPNQNTGIVV 380
Score = 100 bits (212), Expect(2) = 1e-046
Identities = 35/62 (56%), Positives = 45/62 (72%)
Frame = -2 / +3
Query: 593 GKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMS 414
G + +YL RPWK YSRT+++Q + + P+GWLEWNG F L+TL+YAE NRG GAD S
Sbjct: 426 GNVSSYLGRPWKLYSRTVFVQTKMEALVHPRGWLEWNGTFALDTLYYAEYMNRGPGADTS 605
Query: 413 KR 408
R
Sbjct: 606 AR 611
>gb|CW221063.1|CW221063 104_656_11197697_148_37167_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197697, DNA
sequence
Length = 667
Score = 185 bits (399), Expect = 7e-046
Identities = 70/164 (42%), Positives = 97/164 (59%)
Frame = -2 / -2
Query: 773 FIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRSVGGTVLHNCTIEPHPDFKEEAG 594
++FGN+ VV Q+C + R PM Q+N +TAQGR D GT L CT+ P+
Sbjct: 666 YVFGNAAVVFQDCNLYSRLPMQGQSNTVTAQGRTDPNQNTGTTLQGCTVAAAPELAANTA 487
Query: 593 GKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMS 414
+ TYL RPWK YSRT+ +Q+++ +DP GW+ W+GD+ L TLFYAE +N G GAD S
Sbjct: 486 FAVATYLGRPWKLYSRTVIMQSEVDALVDPAGWMPWDGDYALSTLFYAEYNNSGPGADTS 307
Query: 413 KRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLL 282
+R W G + FTV + G ++P+ GVPF GL+
Sbjct: 306 RRVAWPGFHVLNGTADAANFTVGNMVLGDFWLPQTGVPFTSGLI 175
>gb|CW266135.1|CW266135 104_735_11232263_148_35265_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232263, DNA
sequence
Length = 623
Score = 123 bits (264), Expect(2) = 2e-045
Identities = 47/102 (46%), Positives = 61/102 (59%)
Frame = -2 / -3
Query: 593 GKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMS 414
G + +YL RPWK YSRT+++Q + + P+GWLEWNG F L+TL+YAE NRG GAD S
Sbjct: 390 GNVSSYLGRPWKLYSRTVFVQTKMEALVHPRGWLEWNGTFALDTLYYAEYMNRGPGADTS 211
Query: 413 KRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPG 288
R W G +T FTV FIQG ++ P+ G
Sbjct: 210 ARVAWSGYHVLTNATDAANFTVLDFIQGDLWLNSTSFPYTLG 85
Score = 80.3 bits (169), Expect(2) = 2e-045
Identities = 30/61 (49%), Positives = 41/61 (67%)
Frame = -2 / -3
Query: 824 HAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRSVGGTV 645
H+ RQF+RDC V GT+DF+FG++ VLQ C + R+P Q N++TAQGR D G V
Sbjct: 618 HSLRQFYRDCDVYGTVDFVFGDAAAVLQGCSLYARRPGPGQKNVVTAQGREDPNQNTGIV 439
Query: 644 L 642
+
Sbjct: 438 V 436
>gb|CW400557.1|CW400557 fsbb001f090o22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f090o22, DNA
sequence
Length = 492
Score = 105 bits (225), Expect(2) = 1e-043
Identities = 41/84 (48%), Positives = 52/84 (61%)
Frame = -2 / +1
Query: 863 QCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITA 684
QC YQDTLY H+ RQF+ + GT+DFIFGN+ VVLQ+C IQ R+P Q + +TA
Sbjct: 1 QCGIQAYQDTLYVHSGRQFYAGTDIAGTVDFIFGNAAVVLQSCDIQARRPSPGQEDTVTA 180
Query: 683 QGRRDKRSVGGTVLHNCTIEPHPD 612
QGR D G +H C + PD
Sbjct: 181 QGRTDPNQNTGISIHRCRVTAAPD 252
Score = 92.7 bits (196), Expect(2) = 1e-043
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = -2 / +1
Query: 599 AGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGAD 420
AG YL RPW+ YSRT+ +++ + + P GWLEW+G F L TL+Y E N G GA
Sbjct: 256 AGTATPVYLGRPWRRYSRTVVMESFLDRSVSPAGWLEWSGQFALSTLYYGEYGNTGPGAG 435
Query: 419 MSKRAKWGGIKT 384
S+R W G+ T
Sbjct: 436 TSRRVTWPGVHT 471
>gb|CL182214.1|CL182214 104_393_10897273_116_31922_265 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10897273, DNA
sequence
Length = 729
Score = 176 bits (378), Expect = 5e-043
Identities = 64/88 (72%), Positives = 78/88 (88%)
Frame = -2 / -2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C FDGYQDTLYTH RQ++R+C +TGTIDFIFGN+QVV QNCLIQ RK M NQ NI+T
Sbjct: 266 YECRFDGYQDTLYTHTSRQYYRECVITGTIDFIFGNAQVVFQNCLIQVRKCMDNQQNIVT 87
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPDFKE 603
AQGR+++RS GGTV+HNCTIEPHP+F++
Sbjct: 86 AQGRKERRSAGGTVIHNCTIEPHPEFEK 3
Score = 124 bits (266), Expect = 2e-027
Identities = 53/83 (63%), Positives = 57/83 (68%)
Frame = +1 / +1
Query: 613 SGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPVT 792
SG GSMVQL TVPP + LS RPCAV M W +M R W+RQF +TT LPKMKSMVPV
Sbjct: 13 SGCGSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMKSMVPVM 192
Query: 793 RQSRKNCRCACVYSVSW*PSKVH 861
SR CR CVYSVSW PS H
Sbjct: 193 THSR*YCRLVCVYSVSWYPSNRH 261
>gb|CW192233.1|CW192233 104_614_11178915_116_36943_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11178915, DNA
sequence
Length = 655
Score = 175 bits (377), Expect = 7e-043
Identities = 64/87 (73%), Positives = 77/87 (88%)
Frame = -2 / +1
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C FDGYQDTLYTH RQ++R+C +TGTIDFIFGN+QVV QNCLIQ RK M NQ NI+T
Sbjct: 394 YECRFDGYQDTLYTHTSRQYYRECVITGTIDFIFGNAQVVFQNCLIQVRKCMDNQQNIVT 573
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPDFK 606
AQGR+++RS GGTV+HNCTIEPHP+F+
Sbjct: 574 AQGRKERRSAGGTVIHNCTIEPHPEFE 654
Score = 124 bits (266), Expect = 2e-027
Identities = 53/83 (63%), Positives = 57/83 (68%)
Frame = +1 / -3
Query: 613 SGWGSMVQLCSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPVT 792
SG GSMVQL TVPP + LS RPCAV M W +M R W+RQF +TT LPKMKSMVPV
Sbjct: 647 SGCGSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMKSMVPVM 468
Query: 793 RQSRKNCRCACVYSVSW*PSKVH 861
SR CR CVYSVSW PS H
Sbjct: 467 THSR*YCRLVCVYSVSWYPSNRH 399
>gb|CX608981.1|CX608981 ANR1_10_A01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_10_A01_A002 3', mRNA sequence
Length = 599
Score = 171 bits (368), Expect = 1e-041
Identities = 68/155 (43%), Positives = 88/155 (56%)
Frame = -2 / +1
Query: 749 VLQNCLIQPRKPMANQANIITAQGRRDKRSVGGTVLHNCTIEPHPDFKEEAGGKIRTYLA 570
V+Q C + R P+ Q N +T QGR D GT LH C + P PD AG T+L
Sbjct: 10 VMQGCALAARLPLRGQQNAVTVQGREDPNQNTGTSLHRCRVVPAPDLAPVAGTDFPTFLG 189
Query: 569 RPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKWGGI 390
RPWK YSRT+ + + + +D +GWLEW+GDF L+TLFY E N G GA + R W G
Sbjct: 190 RPWKAYSRTVVMLSYLDAHVDARGWLEWDGDFALKTLFYGEYQNEGPGAATAGRVNWPGY 369
Query: 389 KTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
+T +FTV FIQG ++ GVP+I GL
Sbjct: 370 HVITDRSVAVQFTVGQFIQGGNWLNGTGVPYIEGL 474
>gb|CW117897.1|CW117897 104_494_11107909_148_34622_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11107909, DNA
sequence
Length = 220
Score = 168 bits (362), Expect = 9e-041
Identities = 66/72 (91%), Positives = 67/72 (93%)
Frame = +1 / -3
Query: 640 CSTVPPTERLSRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPVTRQSRKNCRC 819
CSTVPPTERLSRRPCAVMMLAW MGFRGW+RQ CSTTWEL KMKSMVPVTRQSRKNCRC
Sbjct: 218 CSTVPPTERLSRRPCAVMMLAWLGMGFRGWMRQLCSTTWELLKMKSMVPVTRQSRKNCRC 39
Query: 820 ACVYSVSW*PSK 855
ACV SVSW*PSK
Sbjct: 38 ACV*SVSW*PSK 3
Score = 168 bits (361), Expect = 1e-040
Identities = 68/73 (93%), Positives = 68/73 (93%)
Frame = -2 / +1
Query: 857 TFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQG 678
TFDGYQDTLYTHAQRQFFRDCRVTGTIDFIF NS VVL NCLIQPRKPM NQANIITA G
Sbjct: 1 TFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFSNSHVVLHNCLIQPRKPMPNQANIITAHG 180
Query: 677 RRDKRSVGGTVLH 639
RRDKRSVGGTVLH
Sbjct: 181 RRDKRSVGGTVLH 219
>gb|CW089034.1|CW089034 104_434_10948469_114_32601_027 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948469, DNA
sequence
Length = 620
Score = 99.6 bits (211), Expect(3) = 2e-040
Identities = 36/80 (45%), Positives = 51/80 (63%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
+ C +G QDTL+ A RQF+R C ++GT+DFI G++ V Q CL+ R+P Q ++T
Sbjct: 32 FNCRIEGNQDTLFAQAYRQFYRSCVISGTVDFIMGDAAAVFQRCLLVVRQPRQGQPAVVT 211
Query: 686 AQGRRDKRSVGGTVLHNCTI 627
AQ RRD + G V+H C I
Sbjct: 212 AQSRRDHQQTTGFVIHRCQI 271
Score = 81.3 bits (171), Expect(3) = 2e-040
Identities = 31/81 (38%), Positives = 49/81 (60%)
Frame = -2 / +2
Query: 608 KEEAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGD 429
K + + TYL RPWKEY+RT+ +++ IGGF+ +G++ W G L T F+ E N GD
Sbjct: 308 KSGSSALVTTYLGRPWKEYARTVVMESIIGGFVHGQGYMPWEGKDDLGTAFFGEFRNGGD 487
Query: 428 GADMSKRAKWGGIKTVTYEEA 366
GA+ + R + G + ++A
Sbjct: 488 GANATGRKEMKGFHVMGKDKA 550
Score = 24.9 bits (48), Expect(3) = 2e-040
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2 / +2
Query: 356 FTVETFIQGQQFIPKFGVP 300
FTV F+ G +IP+ G P
Sbjct: 557 FTVGHFLHGADWIPETGTP 613
>gb|CW280823.1|CW280823 104_756_11407836_148_35454_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11407836, DNA
sequence
Length = 644
Score = 111 bits (238), Expect(2) = 4e-040
Identities = 43/88 (48%), Positives = 56/88 (63%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
YQC G+QDTL+ H+ RQF+ D V+GT+DFIFGN+ VLQ C IQ R+P Q +++T
Sbjct: 167 YQCEVKGHQDTLFAHSNRQFYGDTDVSGTVDFIFGNAAAVLQRCGIQARRPRPGQQDVVT 346
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPDFKE 603
AQGR D G +H C + PD E
Sbjct: 347 AQGRADPNQNTGFSIHRCRVTGAPDLGE 430
Score = 74.8 bits (157), Expect(2) = 4e-040
Identities = 27/70 (38%), Positives = 38/70 (54%)
Frame = -2 / +2
Query: 593 GKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMS 414
G+ YL RPW+ Y+R + + G + P GWL+W+G TL+Y E N G GA +
Sbjct: 425 GETPVYLGRPWRRYARVAVMATSLDGSVAPAGWLQWSGQPAPGTLYYGEYRNTGAGAATA 604
Query: 413 KRAKWGGIKT 384
R W G+ T
Sbjct: 605 GRVTWTGVHT 634
>gb|CW241950.1|CW241950 104_701_11219058_116_37554_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11219058, DNA
sequence
Length = 636
Score = 93.6 bits (198), Expect(3) = 4e-040
Identities = 36/75 (48%), Positives = 46/75 (61%)
Frame = -2 / -3
Query: 848 GYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRD 669
G+QDTLY H+ RQ +RDCRV GT+DF+FGN VV+Q L+ Q +TAQGR+D
Sbjct: 634 GHQDTLYAHSLRQLYRDCRVAGTVDFVFGNGIVVVQRSLVATLPLAPGQTGSVTAQGRKD 455
Query: 668 KRSVGGTVLHNCTIE 624
G H C +E
Sbjct: 454 PNQNTGFSFHGCVVE 410
Score = 57.4 bits (119), Expect(3) = 4e-040
Identities = 25/63 (39%), Positives = 31/63 (49%)
Frame = -2 / -3
Query: 473 GLETLFYAEVDNRGDGADMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFI 294
GL TLFY E N G GA ++ R KW G + FTV FI G ++P G+ F
Sbjct: 271 GLATLFYGEYKNYGPGAGVAGRVKWPGYHVIMDAAVASRFTVRRFIDGLAWLPGTGITFT 92
Query: 293 PGL 285
L
Sbjct: 91 ADL 83
Score = 53.8 bits (111), Expect(3) = 4e-040
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -2 / -3
Query: 593 GKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEW 486
GK TYL RPWK +SR + +++ +G I +GWLEW
Sbjct: 409 GKYPTYLGRPWKPFSRVVVMESYLGPGIQARGWLEW 302
>gb|CW340402.1|CW340402 104_841_11485781_116_36146_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485781, DNA
sequence
Length = 672
Score = 94.1 bits (199), Expect(3) = 5e-040
Identities = 34/80 (42%), Positives = 50/80 (62%)
Frame = -2 / -2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
+ C +G Q L+ A RQF+R C ++GT+DFI G++ V Q CL++ R+P Q ++T
Sbjct: 620 FNCRIEGNQAGLFAQAYRQFYRSCVISGTVDFIMGDAAAVFQRCLLRVRQPRQGQPAVVT 441
Query: 686 AQGRRDKRSVGGTVLHNCTI 627
AQ RRD + G V+H C I
Sbjct: 440 AQSRRDHQQTTGFVIHRCQI 381
Score = 81.3 bits (171), Expect(3) = 5e-040
Identities = 31/81 (38%), Positives = 49/81 (60%)
Frame = -2 / -2
Query: 608 KEEAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGD 429
K + + TYL RPWKEY+RT+ +++ IGGF+ +G++ W G L T F+ E N GD
Sbjct: 344 KSGSSALVTTYLGRPWKEYARTVVMESIIGGFVHGQGYMPWEGKDDLGTAFFGEFRNGGD 165
Query: 428 GADMSKRAKWGGIKTVTYEEA 366
GA+ + R + G + ++A
Sbjct: 164 GANATGRKEMKGFHVMGKDKA 102
Score = 29.0 bits (57), Expect(3) = 5e-040
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2 / -2
Query: 356 FTVETFIQGQQFIPKFGVPFIPGLLPQEQ 270
FTV F+ G +IP+ G P GL +E+
Sbjct: 95 FTVGHFLHGADWIPETGTPVSLGLSGEEE 9
>gb|CW441491.1|CW441491 fsbb001f160k16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f160k16, DNA
sequence
Length = 538
Score = 126 bits (270), Expect(2) = 9e-040
Identities = 46/100 (46%), Positives = 64/100 (64%)
Frame = -2 / -1
Query: 584 RTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRA 405
+TYL RPWK+YSR +++Q+ IG + P+GWL W+GDF L+TL+Y E N G GA ++ R
Sbjct: 331 QTYLGRPWKQYSRVVFMQSYIGDLVRPEGWLAWDGDFALDTLYYGEYSNTGPGAGVAARV 152
Query: 404 KWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
KW G +T FTV FI+G ++P GV + GL
Sbjct: 151 KWPGFHVMTSAAEAGNFTVAQFIEGNMWLPPTGVKYTAGL 32
Score = 58.8 bits (122), Expect(2) = 9e-040
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = -2 / -1
Query: 764 GNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRSVGGTVLHNCTIEPHPD 612
GN+ V QNC + PR+P+ +Q N +TAQGR D G C + HP+
Sbjct: 538 GNAAAVFQNCSLLPRRPLPDQKNSVTAQGRLDANMTTGFAFQFCNVSAHPE 386
>gb|CW172749.1|CW172749 104_584_11156458_148_36543_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156458, DNA
sequence
Length = 626
Score = 127 bits (271), Expect(2) = 3e-039
Identities = 48/90 (53%), Positives = 61/90 (67%)
Frame = -2 / +1
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+F GYQDTLY H+ RQFFRDC + GTIDF+FGN+ VVLQ C + RKP+ NQ+NI T
Sbjct: 253 YRCSFVGYQDTLYVHSLRQFFRDCDIYGTIDFVFGNAAVVLQGCNLYARKPLPNQSNIFT 432
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPDFKEEA 597
AQGR D G +H C + D + +
Sbjct: 433 AQGREDPNQNTGISIHRCKVAAAADLLQSS 522
Score = 94.5 bits (200), Expect(2) = 4e-022
Identities = 40/63 (63%), Positives = 43/63 (68%)
Frame = +1 / -1
Query: 670 SRRPCAVMMLAWFAMGFRGWIRQFCSTTWELPKMKSMVPVTRQSRKNCRCACVYSVSW*P 849
S RPCAV ML W G R + Q CSTT LPK KSMVP QSRKNCR C YSVSW*P
Sbjct: 449 SSRPCAVKMLLWLGSGLRAYRLQPCSTTAALPKTKSMVP*MSQSRKNCRRECTYSVSW*P 270
Query: 850 SKV 858
+K+
Sbjct: 269 TKL 261
Score = 56.5 bits (117), Expect(2) = 3e-039
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -2 / +1
Query: 602 EAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWL 492
++ +TYL RPWK+YSRT+++Q+++ I P GWL
Sbjct: 514 QSSSSTKTYLGRPWKQYSRTVFLQSELDSLIAPAGWL 624
Score = 31.8 bits (63), Expect(2) = 4e-022
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1 / -1
Query: 490 SSQPLGSMKPPMSFWM*IVREYSFQGRARYVRI 588
SSQP G+M S VREY F GR R V +
Sbjct: 626 SSQPAGAMSESSSDCRKTVREYCFHGRPR*VLV 528
>gb|CW340403.1|CW340403 104_841_11485781_148_36147_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485781, DNA
sequence
Length = 675
Score = 99.6 bits (211), Expect(2) = 4e-038
Identities = 36/80 (45%), Positives = 51/80 (63%)
Frame = -2 / +1
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
+ C +G QDTL+ A RQF+R C ++GT+DFI G++ V Q CL+ R+P Q ++T
Sbjct: 145 FNCRIEGNQDTLFAQAYRQFYRSCVISGTVDFIMGDAAAVFQRCLLVVRQPRQGQPAVVT 324
Query: 686 AQGRRDKRSVGGTVLHNCTI 627
AQ RRD + G V+H C I
Sbjct: 325 AQSRRDHQQTTGFVIHRCQI 384
Score = 80.3 bits (169), Expect(2) = 4e-038
Identities = 30/72 (41%), Positives = 45/72 (62%)
Frame = -2 / +1
Query: 608 KEEAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGD 429
K + + TYL RPWKEY+RT+ +++ IGGF+ +G++ W G L T F+ E N GD
Sbjct: 421 KSGSSALVTTYLGRPWKEYARTVVMESIIGGFVHGQGYMPWEGKDDLXTAFFGEFRNGGD 600
Query: 428 GADMSKRAKWGG 393
GA+ + R + G
Sbjct: 601 GANATGRKEMKG 636
>gb|CD203710.1|CD203710 HS1_1_D09.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_1_D09_A012 3', mRNA sequence
Length = 654
Score = 126 bits (270), Expect(2) = 4e-038
Identities = 46/106 (43%), Positives = 66/106 (62%)
Frame = -2 / +2
Query: 602 EAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGA 423
++ +TYL RPWK+YSRT+++Q+++ I P GWLEW+G+F L+TL+Y E N G GA
Sbjct: 146 QSSSSTKTYLGRPWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGA 325
Query: 422 DMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
S R KW G + +T FTV +FI G ++ +PF GL
Sbjct: 326 GTSGRVKWKGYRVITSAAEASAFTVGSFIDGDVWLAGTSIPFTTGL 463
Score = 53.3 bits (110), Expect(2) = 4e-038
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = -2 / +2
Query: 749 VLQNCLIQPRKPMANQANIITAQGRRDKRSVGGTVLHNCTIEPHPDFKEEA 597
VLQ C + RKP+ NQ+NI TAQGR D G +H C + D + +
Sbjct: 2 VLQGCNLYARKPLPNQSNIFTAQGREDPNQNTGISIHRCKVAAAADLLQSS 154
>gb|CN125758.1|CN125758 RHOH1_13_D02.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_13_D02_A002 3', mRNA sequence
Length = 689
Score = 126 bits (270), Expect(2) = 1e-037
Identities = 46/106 (43%), Positives = 66/106 (62%)
Frame = -2 / +3
Query: 602 EAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGA 423
++ +TYL RPWK+YSRT+++Q+++ I P GWLEW+G+F L+TL+Y E N G GA
Sbjct: 144 QSSSSTKTYLGRPWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGA 323
Query: 422 DMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
S R KW G + +T FTV +FI G ++ +PF GL
Sbjct: 324 GTSGRVKWKGYRVITSAAEASAFTVGSFIDGDVWLAGTSIPFTTGL 461
Score = 51.5 bits (106), Expect(2) = 1e-037
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = -2 / +3
Query: 746 LQNCLIQPRKPMANQANIITAQGRRDKRSVGGTVLHNCTIEPHPDFKEEA 597
LQ C + RKP+ NQ+NI TAQGR D G +H C + D + +
Sbjct: 3 LQGCNLYARKPLPNQSNIFTAQGREDPNQNTGISIHRCKVAAAADLLQSS 152
>gb|CW280822.1|CW280822 104_756_11407836_116_35450_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11407836, DNA
sequence
Length = 648
Score = 94.1 bits (199), Expect(2) = 3e-037
Identities = 38/103 (36%), Positives = 52/103 (50%)
Frame = -2 / -3
Query: 593 GKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMS 414
G+ YL RPW+ Y+R + + G + P GWL+W+G TL+Y E N G GA +
Sbjct: 442 GETPVYLGRPWRRYARVAVMATSLDGSVAPAGWLQWSGQPAPGTLYYGEYRNTGAGAATA 263
Query: 413 KRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
R W G+ T E FTV FI G ++ GV + GL
Sbjct: 262 GRVTWTGVHTSMSTEDAAGFTVANFIMGDSWLDATGVKYTSGL 134
Score = 83.1 bits (175), Expect(2) = 3e-037
Identities = 33/70 (47%), Positives = 43/70 (61%)
Frame = -2 / -3
Query: 812 QFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIITAQGRRDKRSVGGTVLHNC 633
QF+ D V+GT+DFIFGN+ VLQ C IQ R+P Q +++TAQGR D G +H C
Sbjct: 646 QFYGDTDVSGTVDFIFGNAAAVLQRCGIQARRPRPGQQDVVTAQGRADPNQNTGFSIHRC 467
Query: 632 TIEPHPDFKE 603
+ PD E
Sbjct: 466 RVTGAPDLGE 437
>gb|CN138851.1|CN138851 OX1_14_H09.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_14_H09_A002 3', mRNA sequence
Length = 491
Score = 152 bits (327), Expect = 6e-036
Identities = 59/147 (40%), Positives = 85/147 (57%)
Frame = -2 / +1
Query: 722 RKPMANQANIITAQGRRDKRSVGGTVLHNCTIEPHPDFKEEAGGKIRTYLARPWKEYSRT 543
R PM Q N +TAQGR D GT + ++ P+ +YL RPWK +SRT
Sbjct: 1 RLPMQGQCNTVTAQGRSDPNQNTGTSIQGSSLVAAPELAANTAFATLSYLGRPWKNFSRT 180
Query: 542 IYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRAKWGGIKTVTYEEAQ 363
+ +++ +GG +DP GW+ W+GDF L+TL YAE +N G GAD S+R W G +
Sbjct: 181 VVMESYVGGLVDPSGWMPWSGDFALDTL*YAEYNNSGPGADTSRRVAWPGFHVLGDITDA 360
Query: 362 KEFTVETFIQGQQFIPKFGVPFIPGLL 282
FTV + + G+ ++P+ GVPF GL+
Sbjct: 361 GNFTVTSMVLGENWLPQTGVPFTSGLI 441
>gb|CD228200.1|CD228200 CCC1_6_B10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_6_B10_A007 3', mRNA sequence
Length = 639
Score = 124 bits (265), Expect(2) = 1e-035
Identities = 45/100 (45%), Positives = 64/100 (64%)
Frame = -2 / +2
Query: 584 RTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRA 405
+TYL RPWK+YSRT+++Q+++ I P GWLEW+G+F L+TL+Y E N G GA S R
Sbjct: 149 KTYLGRPWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRV 328
Query: 404 KWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
+W G + +T FTV +FI G ++ +PF GL
Sbjct: 329 RWKGYRVITSAAEASAFTVGSFIDGDVWLAGTSIPFTTGL 448
Score = 47.3 bits (97), Expect(2) = 1e-035
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -2 / +2
Query: 737 CLIQPRKPMANQANIITAQGRRDKRSVGGTVLHNCTIEPHPDFKEEAGGK 588
C + RKP+ NQ+NI TAQGR D G +H C + D K
Sbjct: 2 CNLYARKPLPNQSNIFTAQGREDPNQNTGISIHRCKVAAAADLLSSTSTK 151
>gb|CX609223.1|CX609223 ANR1_11_H09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_H09_A002 3', mRNA sequence
Length = 647
Score = 126 bits (270), Expect(2) = 2e-035
Identities = 46/106 (43%), Positives = 66/106 (62%)
Frame = -2 / +2
Query: 602 EAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGA 423
++ +TYL RPWK+YSRT+++Q+++ I P GWLEW+G+F L+TL+Y E N G GA
Sbjct: 131 QSSSSTKTYLGRPWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGA 310
Query: 422 DMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
S R KW G + +T FTV +FI G ++ +PF GL
Sbjct: 311 GTSGRVKWKGYRVITSAAEASAFTVGSFIDGDVWLAGTSIPFTTGL 448
Score = 44.6 bits (91), Expect(2) = 2e-035
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -2 / +2
Query: 722 RKPMANQANIITAQGRRDKRSVGGTVLHNCTIEPHPDFKEEA 597
RKP+ NQ+NI TAQGR D G +H C + D + +
Sbjct: 14 RKPLPNQSNIFTAQGREDPNQNTGISIHRCKVAAAADLLQSS 139
>gb|CD233006.1|CD233006 SS1_11_H04.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_11_H04_A012 3', mRNA sequence
Length = 635
Score = 126 bits (270), Expect(2) = 2e-035
Identities = 46/106 (43%), Positives = 66/106 (62%)
Frame = -2 / +1
Query: 602 EAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGA 423
++ +TYL RPWK+YSRT+++Q+++ I P GWLEW+G+F L+TL+Y E N G GA
Sbjct: 127 QSSSSTKTYLGRPWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGA 306
Query: 422 DMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
S R KW G + +T FTV +FI G ++ +PF GL
Sbjct: 307 GTSGRVKWKGYRVITSAAEASAFTVGSFIDGDVWLAGTSIPFTTGL 444
Score = 44.6 bits (91), Expect(2) = 2e-035
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -2 / +1
Query: 722 RKPMANQANIITAQGRRDKRSVGGTVLHNCTIEPHPDFKEEA 597
RKP+ NQ+NI TAQGR D G +H C + D + +
Sbjct: 10 RKPLPNQSNIFTAQGREDPNQNTGISIHRCKVAAAADLLQSS 135
>gb|CF486088.1|CF486088 POL1_35_D06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_D06_A002 5', mRNA sequence
Length = 576
Score = 125 bits (268), Expect(2) = 8e-035
Identities = 48/82 (58%), Positives = 58/82 (70%)
Frame = -2 / +2
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
+ C F+GYQDTLY HA RQFFR+C V GT+DFIFGNS + QNCL+ RKP +Q+N++T
Sbjct: 215 FNCRFEGYQDTLYVHANRQFFRNCEVLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVT 394
Query: 686 AQGRRDKRSVGGTVLHNCTIEP 621
AQGR D G VL C I P
Sbjct: 395 AQGRTDPNMPTGIVLQGCRIVP 460
Score = 43.2 bits (88), Expect(2) = 8e-035
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = -2 / +2
Query: 590 KIRTYLARPWKEYSRTIYIQNDIGGFIDP 504
++ +YL RPWKEY+RT+ +++ IG I P
Sbjct: 488 QVPSYLGRPWKEYARTVVMESTIGDLIRP 574
>gb|CW413647.1|CW413647 fsbb001f112o08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f112o08, DNA
sequence
Length = 593
Score = 96.8 bits (205), Expect(2) = 8e-034
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = -2 / -2
Query: 584 RTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGADMSKRA 405
R YL RPWKEY+RT+Y+ +G + P+GWL W GDF L TL+Y E D+RG GA+ + R
Sbjct: 253 RLYLGRPWKEYARTLYVSCYLGTVVRPEGWLPWRGDFALRTLYYGEFDSRGPGANNTARV 74
Query: 404 KW 399
+W
Sbjct: 73 EW 68
Score = 70.7 bits (148), Expect(2) = 8e-034
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = -2 / -2
Query: 848 GYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQ 726
G QDTLY H RQF+R C +TGT+DFIFGN+ V + C+I+
Sbjct: 538 GIQDTLYAHTMRQFYRRCHITGTVDFIFGNAAAVFEECVIK 416
>gb|AW287387.2|AW287387 LG1_303_C07.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 490
Score = 126 bits (270), Expect(2) = 3e-033
Identities = 46/106 (43%), Positives = 66/106 (62%)
Frame = -2 / +1
Query: 602 EAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGDGA 423
++ +TYL RPWK+YSRT+++Q+++ I P GWLEW+G+F L+TL+Y E N G GA
Sbjct: 118 QSSSSTKTYLGRPWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGA 297
Query: 422 DMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGL 285
S R KW G + +T FTV +FI G ++ +PF GL
Sbjct: 298 GTSGRVKWKGYRVITSAAEASAFTVGSFIDGDVWLAGTSIPFTTGL 435
Score = 36.8 bits (74), Expect(2) = 3e-033
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2 / +1
Query: 713 MANQANIITAQGRRDKRSVGGTVLHNCTIEPHPDFKEEA 597
+ NQ+NI TAQGR D G +H C + D + +
Sbjct: 10 LPNQSNIFTAQGREDPNQNTGISIHRCKVAAAADLLQSS 126
>gb|CW339306.1|CW339306 104_840_11485203_148_36139_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485203, DNA
sequence
Length = 669
Score = 127 bits (271), Expect(2) = 8e-032
Identities = 48/90 (53%), Positives = 61/90 (67%)
Frame = -2 / +1
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
Y+C+F GYQDTLY H+ RQFFRDC + GTIDF+FGN+ VVLQ C + RKP+ NQ+NI T
Sbjct: 352 YRCSFVGYQDTLYVHSLRQFFRDCDIYGTIDFVFGNAAVVLQGCNLYARKPLPNQSNIFT 531
Query: 686 AQGRRDKRSVGGTVLHNCTIEPHPDFKEEA 597
AQGR D G +H C + D + +
Sbjct: 532 AQGREDPNQNTGISIHRCKVAAAADLLQSS 621
Score = 31.8 bits (63), Expect(2) = 8e-032
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2 / +3
Query: 584 RTYLARPWKEYSR 546
+TYL RPWK+YSR
Sbjct: 630 QTYLGRPWKQYSR 668
>gb|BE361683.1|BE361683 DG1_81_F09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 592
Score = 134 bits (288), Expect = 1e-030
Identities = 49/118 (41%), Positives = 69/118 (58%)
Frame = -2 / +3
Query: 635 CTIEPHPDFKEEAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLF 456
CT+ P+ + TYL RPWK YSRT+ +Q+++ +DP GW+ W+GD+ L TLF
Sbjct: 3 CTVAAAPELAANTAFAVATYLGRPWKLYSRTVIMQSEVDALVDPAGWMPWDGDYALSTLF 182
Query: 455 YAEVDNRGDGADMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLL 282
YAE +N G GAD S+R W G + FTV + G ++P+ GVPF GL+
Sbjct: 183 YAEYNNSGPGADTSRRVAWPGFHVLNGTADAANFTVGNMVLGDFWLPQTGVPFTSGLI 356
>gb|CW172299.1|CW172299 104_583_11156215_148_36534_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156215, DNA
sequence
Length = 531
Score = 132 bits (283), Expect = 7e-030
Identities = 48/124 (38%), Positives = 74/124 (59%)
Frame = -2 / -2
Query: 653 GTVLHNCTIEPHPDFKEEAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDF 474
GT + ++ P+ +YL RPWK +SRT+ +++ +GG +DP GW+ W+GDF
Sbjct: 527 GTSIQGSSLVAAPELAANTAFATLSYLGRPWKNFSRTVVMESYVGGLVDPSGWMPWSGDF 348
Query: 473 GLETLFYAEVDNRGDGADMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFI 294
L+TL+YAE +N G GAD S+R W G + FTV + + G+ ++P+ GVPF
Sbjct: 347 ALDTLYYAEYNNSGPGADTSRRVAWPGFHVLGDITDAGNFTVTSMVLGENWLPQTGVPFT 168
Query: 293 PGLL 282
GL+
Sbjct: 167 SGLI 156
>gb|CW433383.1|CW433383 fsbb001f148j05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f148j05, DNA
sequence
Length = 689
Score = 95.5 bits (202), Expect(2) = 6e-029
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = -2 / +1
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
++ +G+QDTLY H+ RQ +RDCRV GT+DF+FGN VV+Q L+ Q +T
Sbjct: 253 FRVAVEGHQDTLYAHSLRQLYRDCRVAGTVDFVFGNGIVVVQRSLVATLPLAPGQTGSVT 432
Query: 686 AQGRRDKRSVGGTVLHNCTIE 624
AQGR+D G H C +E
Sbjct: 433 AQGRKDPNQNTGFSFHGCVVE 495
Score = 53.8 bits (111), Expect(2) = 6e-029
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -2 / +1
Query: 593 GKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEW 486
GK TYL RPWK +SR + +++ +G I +GWLEW
Sbjct: 496 GKYPTYLGRPWKPFSRVVVMESYLGPGIQARGWLEW 603
>gb|CW241951.1|CW241951 104_701_11219058_148_37553_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11219058, DNA
sequence
Length = 563
Score = 95.5 bits (202), Expect(2) = 6e-029
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = -2 / +1
Query: 866 YQCTFDGYQDTLYTHAQRQFFRDCRVTGTIDFIFGNSQVVLQNCLIQPRKPMANQANIIT 687
++ +G+QDTLY H+ RQ +RDCRV GT+DF+FGN VV+Q L+ Q +T
Sbjct: 124 FRVAVEGHQDTLYAHSLRQLYRDCRVAGTVDFVFGNGIVVVQRSLVATLPLAPGQTGSVT 303
Query: 686 AQGRRDKRSVGGTVLHNCTIE 624
AQGR+D G H C +E
Sbjct: 304 AQGRKDPNQNTGFSFHGCVVE 366
Score = 53.8 bits (111), Expect(2) = 6e-029
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -2 / +1
Query: 593 GKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEW 486
GK TYL RPWK +SR + +++ +G I +GWLEW
Sbjct: 367 GKYPTYLGRPWKPFSRVVVMESYLGPGIQARGWLEW 474
>gb|CW355046.1|CW355046 fsbb001f019i07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f019i07, DNA
sequence
Length = 732
Score = 128 bits (275), Expect = 9e-029
Identities = 47/112 (41%), Positives = 66/112 (58%)
Frame = -2 / -3
Query: 617 PDFKEEAGGKIRTYLARPWKEYSRTIYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDN 438
P+ + TYL RPWK YSRT+ +Q+++ +DP GW+ W+GD+ L TLFYAE +N
Sbjct: 724 PELAANTAFAVATYLGRPWKLYSRTVIMQSEVDALVDPAGWMPWDGDYALSTLFYAEYNN 545
Query: 437 RGDGADMSKRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKFGVPFIPGLL 282
G GAD S+R W G + FTV + G ++P+ GVPF GL+
Sbjct: 544 SGPGADTSRRVAWPGFHVLNGTADAANFTVGNMVLGDFWLPQTGVPFTSGLI 389
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 830,434,104
Number of Sequences: 832831
Number of extensions: 12517869
Number of successful extensions: 123488
Number of sequences better than 1.0e-020: 80
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 27802401588
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)