TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3871943.2.1
(1085 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW155885.1|CW155885 104_558_11146378_148_36365_037 Sorgh... 480 e-139
gb|CF486088.1|CF486088 POL1_35_D06.g1_A002 Pollen Sorghum b... 390 e-107
gb|CF486010.1|CF486010 POL1_35_D06.b1_A002 Pollen Sorghum b... 337 3e-097
gb|CW355045.1|CW355045 fsbb001f019i07f0 Sorghum methylation... 155 1e-071
gb|CW386938.1|CW386938 fsbb001f071b07f0 Sorghum methylation... 261 2e-068
gb|BG356421.1|BG356421 EM1_22_D02.g1_A002 Embryo 1 (EM1) So... 226 2e-064
gb|CW339305.1|CW339305 104_840_11485203_116_36138_016 Sorgh... 227 5e-064
gb|CW340403.1|CW340403 104_841_11485781_148_36147_023 Sorgh... 156 2e-060
gb|CW340402.1|CW340402 104_841_11485781_116_36146_023 Sorgh... 131 2e-060
gb|CW089034.1|CW089034 104_434_10948469_114_32601_027 Sorgh... 130 9e-060
gb|CW280823.1|CW280823 104_756_11407836_148_35454_044 Sorgh... 155 2e-059
gb|CW266135.1|CW266135 104_735_11232263_148_35265_084 Sorgh... 213 1e-058
gb|CW369334.1|CW369334 fsbb001f043l06f0 Sorghum methylation... 170 4e-058
gb|CW172749.1|CW172749 104_584_11156458_148_36543_045 Sorgh... 215 1e-054
gb|CW400557.1|CW400557 fsbb001f090o22f0 Sorghum methylation... 118 2e-053
gb|CW276959.1|CW276959 104_750_11405768_116_35395_018 Sorgh... 115 2e-051
gb|BG049225.1|BG049225 OV1_17_B10.g1_A002 Ovary 1 (OV1) Sor... 109 2e-050
gb|BG048275.1|BG048275 OV1_16_B07.g1_A002 Ovary 1 (OV1) Sor... 115 2e-049
gb|CW241951.1|CW241951 104_701_11219058_148_37553_073 Sorgh... 142 6e-049
gb|CW192234.1|CW192234 104_614_11178915_148_36944_006 Sorgh... 105 1e-047
gb|CW221063.1|CW221063 104_656_11197697_148_37167_079 Sorgh... 121 5e-047
gb|CW057246.1|CW057246 104_299_10518117_115_30171 Sorghum m... 188 2e-046
gb|CW441491.1|CW441491 fsbb001f160k16f0 Sorghum methylation... 133 2e-046
gb|CW241950.1|CW241950 104_701_11219058_116_37554_073 Sorgh... 95 3e-046
gb|CL182214.1|CL182214 104_393_10897273_116_31922_265 Sorgh... 186 5e-046
gb|CW192233.1|CW192233 104_614_11178915_116_36943_006 Sorgh... 186 5e-046
gb|CW281478.1|CW281478 104_757_11408201_116_35463_077 Sorgh... 172 6e-046
gb|CD203710.1|CD203710 HS1_1_D09.b1_A012 Heat-shocked seedl... 166 1e-045
gb|CN125758.1|CN125758 RHOH1_13_D02.b1_A002 Acid- and alkal... 166 2e-045
gb|CW339306.1|CW339306 104_840_11485203_148_36139_016 Sorgh... 167 4e-044
gb|CX609223.1|CX609223 ANR1_11_H09.b1_A002 Anaerobic roots ... 160 5e-044
gb|CD233006.1|CD233006 SS1_11_H04.b1_A012 Salt-stressed see... 160 5e-044
gb|CW433383.1|CW433383 fsbb001f148j05f0 Sorghum methylation... 142 9e-044
gb|AW287387.2|AW287387 LG1_303_C07.b1_A002 Light Grown 1 (L... 155 2e-042
gb|CX608981.1|CX608981 ANR1_10_A01.b1_A002 Anaerobic roots ... 115 7e-042
gb|CD228200.1|CD228200 CCC1_6_B10.b1_A007 Callus culture/ce... 120 3e-041
gb|CW443774.1|CW443774 fsbb001f164a20k0 Sorghum methylation... 166 4e-040
gb|BF421213.1|BF421213 FM1_6_H03.b1_A003 Floral-Induced Mer... 164 3e-039
gb|CW328078.1|CW328078 104_824_11479103_148_35988_096 Sorgh... 105 5e-039
gb|CL150595.1|CL150595 104_332_10778646_114_31357_198 Sorgh... 162 7e-039
gb|CW280822.1|CW280822 104_756_11407836_116_35450_044 Sorgh... 96 2e-038
gb|CW321706.1|CW321706 104_815_11475696_148_35943_094 Sorgh... 155 8e-037
gb|CN138851.1|CN138851 OX1_14_H09.b1_A002 Oxidatively-stres... 122 1e-036
gb|CW152394.1|CW152394 104_553_11144468_116_36324_070 Sorgh... 150 2e-036
gb|CW152395.1|CW152395 104_553_11144468_148_36328_070 Sorgh... 150 2e-036
gb|CW177247.1|CW177247 104_590_11158924_116_36597_008 Sorgh... 92 2e-036
gb|CW263791.1|CW263791 104_732_11230914_148_35236_075 Sorgh... 92 2e-036
gb|CW172298.1|CW172298 104_583_11156215_116_36533_024 Sorgh... 151 2e-035
gb|CW137808.1|CW137808 104_525_11119866_116_34879_075 Sorgh... 96 3e-035
gb|CW216947.1|CW216947 104_650_11195395_116_37129_080 Sorgh... 150 3e-035
gb|CW261864.1|CW261864 104_729_11229744_148_35206_094 Sorgh... 119 5e-035
gb|CW221570.1|CW221570 104_656_11197980_116_37169_036 Sorgh... 123 1e-034
gb|CL161408.1|CL161408 104_352_10805702_114_31826_374 Sorgh... 123 1e-034
gb|CW413647.1|CW413647 fsbb001f112o08k0 Sorghum methylation... 100 1e-034
gb|CL180812.1|CL180812 104_391_10896290_116_31928_050 Sorgh... 148 1e-034
gb|CW463110.1|CW463110 fsbb001f211i20f0 Sorghum methylation... 148 1e-034
gb|CW468784.1|CW468784 fsbb001f221c20f0 Sorghum methylation... 146 6e-034
gb|CW200385.1|CW200385 104_625_11184038_148_36863_049 Sorgh... 68 9e-034
gb|CW266134.1|CW266134 104_735_11232263_116_35269_084 Sorgh... 145 1e-033
gb|CW349542.1|CW349542 fsbb001f010h01f0 Sorghum methylation... 133 6e-033
gb|CW350958.1|CW350958 fsbb001f012i07k0 Sorghum methylation... 98 8e-033
gb|CW084628.1|CW084628 104_427_10945909_114_32507_055 Sorgh... 98 1e-032
gb|CD432457.1|CD432457 ETH1_30_A08.b1_A002 Ethylene-treated... 120 7e-032
gb|CL176112.1|CL176112 104_382_10892904_116_31763_120 Sorgh... 138 2e-031
gb|BG240770.1|BG240770 OV1_38_A10.g1_A002 Ovary 1 (OV1) Sor... 105 4e-031
gb|CW104209.1|CW104209 104_473_11012308_116_34443_012 Sorgh... 96 6e-031
gb|BG411772.1|BG411772 OV2_37_H05.g1_A002 Ovary 2 (OV2) Sor... 105 8e-031
gb|CW355046.1|CW355046 fsbb001f019i07k0 Sorghum methylation... 121 1e-030
gb|CX606104.1|CX606104 ANR1_1_D12.b1_A002 Anaerobic roots S... 127 1e-030
gb|BE361683.1|BE361683 DG1_81_F09.g1_A002 Dark Grown 1 (DG1... 121 1e-030
gb|CW172299.1|CW172299 104_583_11156215_148_36534_024 Sorgh... 127 1e-030
gb|CW481932.1|CW481932 fsbb001f241m07f0 Sorghum methylation... 93 5e-030
gb|BZ344309.1|BZ344309 hp62c02.b2 WGS-SbicolorF (JM107 adap... 133 6e-030
gb|CW230595.1|CW230595 104_679_11210649_148_37483_039 Sorgh... 58 7e-030
gb|CN124984.1|CN124984 RHOH1_8_D12.b1_A002 Acid- and alkali... 87 1e-029
gb|CW450958.1|CW450958 fsbb001f189n08k0 Sorghum methylation... 62 1e-029
gb|CD233140.1|CD233140 SS1_12_A05.b1_A012 Salt-stressed see... 84 2e-029
gb|CW349543.1|CW349543 fsbb001f010h01k0 Sorghum methylation... 130 4e-029
gb|CD231524.1|CD231524 SS1_22_A05.b1_A012 Salt-stressed see... 113 5e-029
gb|CW087491.1|CW087491 104_432_10947663_114_32550_062 Sorgh... 65 1e-028
gb|BG357676.1|BG357676 OV2_32_H07.g1_A002 Ovary 2 (OV2) Sor... 106 2e-028
gb|CW104791.1|CW104791 104_474_11012610_116_34451_079 Sorgh... 121 3e-028
gb|BZ369841.1|BZ369841 id13a01.g1 WGS-SbicolorF (DH5a methy... 101 3e-028
gb|CD203831.1|CD203831 HS1_2_G09.b1_A012 Heat-shocked seedl... 118 4e-028
gb|CN126747.1|CN126747 RHOH1_19_A03.b1_A002 Acid- and alkal... 84 4e-028
gb|CW112880.1|CW112880 104_486_11105136_116_34548_082 Sorgh... 110 7e-028
gb|CW062189.1|CW062189 104_307_10521202_5_30083 Sorghum met... 100 9e-028
gb|CW158018.1|CW158018 104_561_11147830_116_36390_085 Sorgh... 92 1e-027
gb|CW325018.1|CW325018 104_819_11477466_148_35913_067 Sorgh... 96 1e-027
gb|BG355811.1|BG355811 EM1_17_A06.g1_A002 Embryo 1 (EM1) So... 98 3e-027
gb|CL161409.1|CL161409 104_352_10805702_116_31827_374 Sorgh... 123 5e-027
gb|CW064932.1|CW064932 104_311_10522850_114_30122 Sorghum m... 123 5e-027
gb|CW107343.1|CW107343 104_477_11096531_148_34472_040 Sorgh... 123 5e-027
gb|CW318185.1|CW318185 104_810_11473816_148_35870_060 Sorgh... 123 5e-027
gb|CW266910.1|CW266910 104_736_11232691_148_35285_066 Sorgh... 92 8e-027
gb|CW467940.1|CW467940 fsbb001f219n10k0 Sorghum methylation... 120 3e-026
gb|BG412481.1|BG412481 OV2_34_H03.g1_A002 Ovary 2 (OV2) Sor... 100 4e-026
gb|CW420369.1|CW420369 fsbb001f126k15k0 Sorghum methylation... 119 6e-026
gb|BF656970.1|BF656970 OV2_19_D03.b1_A002 Ovary 2 (OV2) Sor... 101 7e-026
gb|CW121987.1|CW121987 104_500_11110291_116_34665_074 Sorgh... 119 9e-026
gb|CW039719.1|CW039719 104_272_10505656_115_30390 Sorghum m... 116 4e-025
gb|BG239895.1|BG239895 OV1_30_D03.g1_A002 Ovary 1 (OV1) Sor... 105 4e-024
gb|CW076050.1|CW076050 104_364_10810303_114_31802_367 Sorgh... 112 8e-024
gb|CW419544.1|CW419544 fsbb001f124h07f0 Sorghum methylation... 111 1e-023
gb|BE918645.1|BE918645 FM1_2_G10.g1_A003 Floral-Induced Mer... 105 1e-023
gb|BG412480.1|BG412480 OV2_34_H02.g1_A002 Ovary 2 (OV2) Sor... 105 1e-023
gb|CW261863.1|CW261863 104_729_11229744_116_35210_094 Sorgh... 95 4e-023
gb|CL184147.1|CL184147 104_397_10898656_116_32363_060 Sorgh... 67 1e-022
gb|CW484442.1|CW484442 fsbb001f246j11k0 Sorghum methylation... 98 2e-022
gb|CW117897.1|CW117897 104_494_11107909_148_34622_061 Sorgh... 107 3e-022
gb|CW276960.1|CW276960 104_750_11405768_148_35399_018 Sorgh... 107 3e-022
gb|CW059765.1|CW059765 104_302_10519506_114_30165 Sorghum m... 83 2e-021
gb|CW140774.1|CW140774 104_531_11135961_148_34920_039 Sorgh... 50 3e-021
gb|CW405176.1|CW405176 fsbb001f097k01k0 Sorghum methylation... 50 4e-021
gb|CW039718.1|CW039718 104_272_10505656_114_30389 Sorghum m... 57 7e-021
>gb|CW155885.1|CW155885 104_558_11146378_148_36365_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146378, DNA
sequence
Length = 728
Score = 480 bits (1042), Expect(2) = e-139
Identities = 191/204 (93%), Positives = 197/204 (96%)
Frame = -2 / -1
Query: 931 MHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEVLGTVDFIFGNSAALFQNCLMTVRK 752
MHVQGD SVF+NCRFEGYQDTLYVHANRQFFR+CEVLGTVDFIFGNSAALFQNCLMTVRK
Sbjct: 728 MHVQGDMSVFFNCRFEGYQDTLYVHANRQFFRNCEVLGTVDFIFGNSAALFQNCLMTVRK 549
Query: 751 PGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQALFPDRLQIATYLGRPWKEYARTVVM 572
PGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQALFP RLQ+ +YLGRPWKEYARTVVM
Sbjct: 548 PGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQALFPVRLQVPSYLGRPWKEYARTVVM 369
Query: 571 ESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVNWPGYHVIGQADATAFT 392
ESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVNWPGY VIGQA+AT FT
Sbjct: 368 ESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVNWPGYRVIGQAEATHFT 189
Query: 391 AGAFIDGASWLQSTGTPNVMGFTK 320
AG FIDG +WLQSTGTPNVMGFTK
Sbjct: 188 AGVFIDGMTWLQSTGTPNVMGFTK 117
Score = 400 bits (867), Expect(2) = e-114
Identities = 168/203 (82%), Positives = 173/203 (85%)
Frame = +3 / +1
Query: 321 LVNPMTLGVPVLCSHDAPSMKAPAVNAVASACPMTW*PGQXXXXXXXXXXXXXXYSA**S 500
LV PMT GVPVL SH PSMK PAV VASACPMT *PGQ YSA**S
Sbjct: 118 LVKPMTFGVPVLWSHVMPSMKTPAVKCVASACPMTR*PGQLTLLLVPAPGPVLAYSA**S 297
Query: 501 VLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR*VAIWRRSGKSACSGTMRQPWS 680
VLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR*+ W R+GKSACSGTMRQPWS
Sbjct: 298 VLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR*LGTWSRTGKSACSGTMRQPWS 477
Query: 681 TMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQSRKNCRLAC 860
T+PVGMLGSV PCAVTMLDWLSPGLRTV+RQFWNSAAELPKMKSTVPSTSQ RKNCR AC
Sbjct: 478 TIPVGMLGSVLPCAVTMLDWLSPGLRTVIRQFWNSAAELPKMKSTVPSTSQLRKNCRFAC 657
Query: 861 TYSVSWYPSNRQL*NTDLSPCTC 929
TYSVSWYPSNRQL NTD+SPCTC
Sbjct: 658 TYSVSWYPSNRQLKNTDMSPCTC 726
Score = 281 bits (608), Expect(4) = e-101
Identities = 116/124 (93%), Positives = 117/124 (94%)
Frame = +2 / +3
Query: 521 HPLRPPFRPDEVADGALHHHRPRVLLPRPAEVGGDLEAVGEERLLRHDAAALEHDARGHV 700
HPLRPPFRPDEVADGALHHHRPRVLLP PAEV G LE GEERLLRHDAAALEHD RGHV
Sbjct: 318 HPLRPPFRPDEVADGALHHHRPRVLLPWPAEVAGHLEPHGEERLLRHDAAALEHDPRGHV 497
Query: 701 GVRPPLRRHHVGLAVPGLAHRHEAVLEQRRRVAEDEVHGAQHLAVAEELPVGVHVQRVLV 880
GVRPPLRRHHVGLAVPGLAHRH+AVLEQRRRVAEDEVHGAQHLAVAEELPV VHVQRVLV
Sbjct: 498 GVRPPLRRHHVGLAVPGLAHRHQAVLEQRRRVAEDEVHGAQHLAVAEELPVRVHVQRVLV 677
Query: 881 PLEP 892
PLEP
Sbjct: 678 PLEP 689
Score = 87.7 bits (185), Expect(6) = 1e-055
Identities = 34/38 (89%), Positives = 34/38 (89%)
Frame = -1 / -3
Query: 782 VPELPHDGAQARGQPVQHGDGARADGPQHAHGHRAPGL 669
VPELP DGAQARGQPVQHGDGA DGPQHAHG RAPGL
Sbjct: 579 VPELPDDGAQARGQPVQHGDGAGEDGPQHAHGDRAPGL 466
Score = 79.9 bits (168), Expect(4) = e-101
Identities = 33/48 (68%), Positives = 38/48 (79%)
Frame = +2 / +3
Query: 305 RSLLPFGESHDVGRAGALQP*RAVDEGAGGECRGVGLSDDVVAWPVDP 448
+ + FGE+HDV RAGAL+P AVDE AGGE RG+GLSDD VA PVDP
Sbjct: 102 KKIRSFGEAHDVWRAGALEPRHAVDEDAGGEVRGLGLSDDAVARPVDP 245
Score = 65.7 bits (137), Expect(6) = 1e-055
Identities = 28/38 (73%), Positives = 29/38 (76%)
Frame = -3 / -2
Query: 435 QATTSSDRPTPRHSPPAPSSTARHGCRAPARPTSWDSP 322
+AT SSDRP PR SPPA SSTA G RAPAR TSW SP
Sbjct: 232 RATASSDRPRPRTSPPASSSTA*RGSRAPARQTSWASP 119
Score = 59.7 bits (124), Expect(6) = 1e-055
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -1 / -3
Query: 911 VGVLQLPVRGVPGHAVRARQPAVLP 837
VGVLQLPVRGVPGHAVRAR+PAVLP
Sbjct: 708 VGVLQLPVRGVPGHAVRAREPAVLP 634
Score = 37.3 bits (75), Expect(2) = e-139
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -3 / -1
Query: 261 SCMQHAFGFIRKLLAFL 211
+CMQHAFGF+R+ LAFL
Sbjct: 56 ACMQHAFGFVRERLAFL 6
Score = 37.3 bits (75), Expect(6) = 1e-055
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / -2
Query: 263 LHACNMLLGLSGNC*HFC 210
LHAC+MLLGLSGN * FC
Sbjct: 58 LHACSMLLGLSGNG*LFC 5
Score = 35.9 bits (72), Expect(4) = e-101
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / +2
Query: 871 CPGTPRTGSCRTPT 912
CPGTPRTGS RTPT
Sbjct: 668 CPGTPRTGS*RTPT 709
Score = 35.0 bits (70), Expect(2) = e-114
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1 / +3
Query: 211 QKC*QFPDKPKSMLHA 258
QK * FPDKPKSMLHA
Sbjct: 6 QKS*PFPDKPKSMLHA 53
Score = 30.9 bits (61), Expect(4) = e-101
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 209 HKNASSFRINPKACCMH 259
+K AS NPKACCMH
Sbjct: 4 NKKASRSLTNPKACCMH 54
Score = 30.4 bits (60), Expect(6) = 1e-055
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / -2
Query: 837 ATARCWAPW 811
ATARCWAPW
Sbjct: 634 ATARCWAPW 608
Score = 29.9 bits (59), Expect(6) = 1e-055
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1 / -3
Query: 566 HHRRPHQAXXXXXXXXXXXPQDALL 492
HHRRPHQA PQDALL
Sbjct: 363 HHRRPHQAGRVGGVDGRPRPQDALL 289
>gb|CF486088.1|CF486088 POL1_35_D06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_D06_A002 5', mRNA sequence
Length = 576
Score = 390 bits (846), Expect = e-107
Identities = 159/181 (87%), Positives = 165/181 (91%)
Frame = -2 / +2
Query: 1084 PTQTVVTGDKSNXXXXXXXXXXXXXAEGNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSV 905
PT+TVVTGDKSN AEGNGFICKSMGFVNTAGP+GHQAVAMHVQGD SV
Sbjct: 32 PTKTVVTGDKSNTGGFATIATPTFSAEGNGFICKSMGFVNTAGPDGHQAVAMHVQGDMSV 211
Query: 904 FYNCRFEGYQDTLYVHANRQFFRDCEVLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMV 725
F+NCRFEGYQDTLYVHANRQFFR+CEVLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMV
Sbjct: 212 FFNCRFEGYQDTLYVHANRQFFRNCEVLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMV 391
Query: 724 TAQGRTDPNMPTGIVLQGCRIVPEQALFPDRLQIATYLGRPWKEYARTVVMESTIGDLIR 545
TAQGRTDPNMPTGIVLQGCRIVPEQALFP RLQ+ +YLGRPWKEYARTVVMESTIGDLIR
Sbjct: 392 TAQGRTDPNMPTGIVLQGCRIVPEQALFPVRLQVPSYLGRPWKEYARTVVMESTIGDLIR 571
Query: 544 P 542
P
Sbjct: 572 P 574
Score = 345 bits (748), Expect = 6e-094
Identities = 139/154 (90%), Positives = 144/154 (93%)
Frame = +3 / -1
Query: 540 SGLMRSPMVLSITTVLAYSFHGRPR*VAIWRRSGKSACSGTMRQPWSTMPVGMLGSVRPC 719
SGLMRSPMVLSITTVLAYSFHGRPR*+ W R+GKSACSGTMRQPWST+PVGMLGSV PC
Sbjct: 576 SGLMRSPMVLSITTVLAYSFHGRPR*LGTWSRTGKSACSGTMRQPWSTIPVGMLGSVLPC 397
Query: 720 AVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQSRKNCRLACTYSVSWYPSNRQL 899
AVTMLDWLSPGLRTV+RQFWNSAAELPKMKSTVPSTSQ RKNCR ACTYSVSWYPSNRQL
Sbjct: 396 AVTMLDWLSPGLRTVIRQFWNSAAELPKMKSTVPSTSQLRKNCRFACTYSVSWYPSNRQL 217
Query: 900 *NTDLSPCTCIATAWCPSGPAVFTNPIDLQMNPL 1001
NTD+SPCTCIATAW PSGPAV T PIDLQMNPL
Sbjct: 216 KNTDMSPCTCIATAW*PSGPAVLTKPIDLQMNPL 115
Score = 261 bits (564), Expect(2) = 5e-073
Identities = 109/117 (93%), Positives = 110/117 (94%)
Frame = +2 / -3
Query: 542 RPDEVADGALHHHRPRVLLPRPAEVGGDLEAVGEERLLRHDAAALEHDARGHVGVRPPLR 721
RPDEVADGALHHHRPRVLLP PAEV G LE GEERLLRHDAAALEHD RGHVGVRPPLR
Sbjct: 574 RPDEVADGALHHHRPRVLLPWPAEVAGHLEPHGEERLLRHDAAALEHDPRGHVGVRPPLR 395
Query: 722 RHHVGLAVPGLAHRHEAVLEQRRRVAEDEVHGAQHLAVAEELPVGVHVQRVLVPLEP 892
RHHVGLAVPGLAHRH+AVLEQRRRVAEDEVHGAQHLAVAEELPV VHVQRVLVPLEP
Sbjct: 394 RHHVGLAVPGLAHRHQAVLEQRRRVAEDEVHGAQHLAVAEELPVRVHVQRVLVPLEP 224
Score = 87.7 bits (185), Expect(4) = 2e-041
Identities = 34/38 (89%), Positives = 34/38 (89%)
Frame = -1 / +1
Query: 782 VPELPHDGAQARGQPVQHGDGARADGPQHAHGHRAPGL 669
VPELP DGAQARGQPVQHGDGA DGPQHAHG RAPGL
Sbjct: 334 VPELPDDGAQARGQPVQHGDGAGEDGPQHAHGDRAPGL 447
Score = 83.5 bits (176), Expect(4) = 2e-041
Identities = 37/56 (66%), Positives = 39/56 (69%)
Frame = -1 / +1
Query: 1004 GQRVHLQVDGVREHXXXXXXXXXXXXXXGRQVGVLQLPVRGVPGHAVRARQPAVLP 837
GQRVHLQVDG R+H G VGVLQLPVRGVPGHAVRAR+PAVLP
Sbjct: 112 GQRVHLQVDGFRQHGGAGWSPGGGDARAGGHVGVLQLPVRGVPGHAVRAREPAVLP 279
Score = 35.9 bits (72), Expect(2) = 5e-073
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / -2
Query: 871 CPGTPRTGSCRTPT 912
CPGTPRTGS RTPT
Sbjct: 245 CPGTPRTGS*RTPT 204
Score = 30.4 bits (60), Expect(4) = 2e-041
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / +3
Query: 837 ATARCWAPW 811
ATARCWAPW
Sbjct: 279 ATARCWAPW 305
Score = 25.8 bits (50), Expect(4) = 2e-041
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1 / +1
Query: 566 HHRRPHQA 543
HHRRPHQA
Sbjct: 550 HHRRPHQA 573
>gb|CF486010.1|CF486010 POL1_35_D06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_D06_A002 3', mRNA sequence
Length = 713
Score = 337 bits (730), Expect(3) = 3e-097
Identities = 134/144 (93%), Positives = 138/144 (95%)
Frame = -2 / +2
Query: 751 PGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQALFPDRLQIATYLGRPWKEYARTVVM 572
PGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQALFP RLQ+ +YLGRPWKEYARTVVM
Sbjct: 20 PGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQALFPVRLQVPSYLGRPWKEYARTVVM 199
Query: 571 ESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVNWPGYHVIGQADATAFT 392
ESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVNWPGY VIGQA+AT FT
Sbjct: 200 ESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVNWPGYRVIGQAEATHFT 379
Query: 391 AGAFIDGASWLQSTGTPNVMGFTK 320
AG FIDG +WLQSTGTPNVMGFTK
Sbjct: 380 AGVFIDGMTWLQSTGTPNVMGFTK 451
Score = 266 bits (575), Expect(4) = 9e-077
Identities = 115/145 (79%), Positives = 118/145 (81%)
Frame = +3 / -3
Query: 321 LVNPMTLGVPVLCSHDAPSMKAPAVNAVASACPMTW*PGQXXXXXXXXXXXXXXYSA**S 500
LV PMT GVPVL SH PSMK PAV VASACPMT *PGQ YSA**S
Sbjct: 450 LVKPMTFGVPVLWSHVMPSMKTPAVKCVASACPMTR*PGQLTLLLVPAPGPVLAYSA**S 271
Query: 501 VLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR*VAIWRRSGKSACSGTMRQPWS 680
VLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR*+ W R+GKSACSGTMRQPWS
Sbjct: 270 VLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR*LGTWSRTGKSACSGTMRQPWS 91
Query: 681 TMPVGMLGSVRPCAVTMLDWLSPGL 755
T+PVGMLGSV PCAVTMLDWLSPGL
Sbjct: 90 TIPVGMLGSVLPCAVTMLDWLSPGL 16
Score = 177 bits (381), Expect(3) = 2e-065
Identities = 71/77 (92%), Positives = 71/77 (92%)
Frame = +2 / -2
Query: 521 HPLRPPFRPDEVADGALHHHRPRVLLPRPAEVGGDLEAVGEERLLRHDAAALEHDARGHV 700
HPLRPPFRPDEVADGALHHHRPRVLLP PAEV G LE GEERLLRHDAAALEHD RGHV
Sbjct: 250 HPLRPPFRPDEVADGALHHHRPRVLLPWPAEVAGHLEPHGEERLLRHDAAALEHDPRGHV 71
Query: 701 GVRPPLRRHHVGLAVPG 751
GVRPPLRRHHVGLAVPG
Sbjct: 70 GVRPPLRRHHVGLAVPG 20
Score = 79.9 bits (168), Expect(3) = 2e-065
Identities = 33/48 (68%), Positives = 38/48 (79%)
Frame = +2 / -2
Query: 305 RSLLPFGESHDVGRAGALQP*RAVDEGAGGECRGVGLSDDVVAWPVDP 448
+ + FGE+HDV RAGAL+P AVDE AGGE RG+GLSDD VA PVDP
Sbjct: 466 KKIRSFGEAHDVWRAGALEPRHAVDEDAGGEVRGLGLSDDAVARPVDP 323
Score = 65.7 bits (137), Expect(4) = 1e-032
Identities = 28/38 (73%), Positives = 29/38 (76%)
Frame = -3 / +3
Query: 435 QATTSSDRPTPRHSPPAPSSTARHGCRAPARPTSWDSP 322
+AT SSDRP PR SPPA SSTA G RAPAR TSW SP
Sbjct: 336 RATASSDRPRPRTSPPASSSTA*RGSRAPARQTSWASP 449
Score = 64.3 bits (134), Expect(4) = 1e-032
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / +1
Query: 749 RGQPVQHGDGARADGPQHAHGHRAPGL 669
RGQPVQHGDGA DGPQHAHG RAPGL
Sbjct: 22 RGQPVQHGDGAGEDGPQHAHGDRAPGL 102
Score = 37.3 bits (75), Expect(3) = 3e-097
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -3 / +2
Query: 261 SCMQHAFGFIRKLLAFL 211
+CMQHAFGF+R+ LAFL
Sbjct: 512 ACMQHAFGFVRERLAFL 562
Score = 37.3 bits (75), Expect(4) = 1e-032
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / +3
Query: 263 LHACNMLLGLSGNC*HFC 210
LHAC+MLLGLSGN * FC
Sbjct: 510 LHACSMLLGLSGNG*LFC 563
Score = 35.0 bits (70), Expect(4) = 9e-077
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1 / -2
Query: 211 QKC*QFPDKPKSMLHA 258
QK * FPDKPKSMLHA
Sbjct: 562 QKS*PFPDKPKSMLHA 515
Score = 33.1 bits (66), Expect(3) = 2e-065
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2 / -3
Query: 203 YAHKNASSFRINPKACCMH 259
Y +K AS NPKACCMH
Sbjct: 570 YNNKKASRSLTNPKACCMH 514
Score = 29.9 bits (59), Expect(4) = 1e-032
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1 / +1
Query: 566 HHRRPHQAXXXXXXXXXXXPQDALL 492
HHRRPHQA PQDALL
Sbjct: 205 HHRRPHQAGRVGGVDGRPRPQDALL 279
Score = 23.1 bits (44), Expect(4) = 9e-077
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2 / -3
Query: 746 PGLAHRHE 769
PGLAHRH+
Sbjct: 24 PGLAHRHQ 1
Score = 22.6 bits (43), Expect(3) = 3e-097
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1 / +3
Query: 188 EAPVHACXGE*DDL 147
EAPVHAC DL
Sbjct: 579 EAPVHACTVNIGDL 620
Score = 22.6 bits (43), Expect(4) = 9e-077
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1 / -2
Query: 148 RSSYSPXHACTGAS 189
RS HACTGAS
Sbjct: 619 RSPIFTVHACTGAS 578
>gb|CW355045.1|CW355045 fsbb001f019i07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f019i07, DNA
sequence
Length = 717
Score = 155 bits (334), Expect(3) = 1e-071
Identities = 61/101 (60%), Positives = 72/101 (71%)
Frame = -2 / +3
Query: 964 TAGPEGHQAVAMHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEVLGTVDFIFGNSAA 785
TAGP HQAVA+ D S FY C FE YQDTLY H+ RQF+R C+V GTVD++FGN+A
Sbjct: 9 TAGPAKHQAVALRSGADLSTFYQCSFEAYQDTLYTHSLRQFYRGCDVYGTVDYVFGNAAV 188
Query: 784 LFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRI 662
+FQ+C + R P QSN VTAQGRTDPN TG LQGC +
Sbjct: 189 VFQDCNLYSRLPMQGQSNTVTAQGRTDPNQNTGTTLQGCTV 311
Score = 121 bits (259), Expect(3) = 1e-071
Identities = 43/69 (62%), Positives = 54/69 (78%)
Frame = -2 / +3
Query: 625 IATYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKR 446
+ATYLGRPWK Y+RTV+M+S + L+ P GW W GD L TL+YAEY N+GPGA TS+R
Sbjct: 351 VATYLGRPWKLYSRTVIMQSEVDALVDPAGWMPWDGDYALSTLFYAEYNNSGPGADTSRR 530
Query: 445 VNWPGYHVI 419
V WPG+HV+
Sbjct: 531 VAWPGFHVL 557
Score = 85.4 bits (180), Expect(3) = 3e-023
Identities = 50/95 (52%), Positives = 52/95 (54%)
Frame = +2 / -2
Query: 605 PAEVGGDLEAVGEERLLRHDAAALEHDARGHVGVRPPLRRHHVGLAVPGLAHRHEAVLEQ 784
P G VG E D AALE AR V VR PLRRH V L + AVLE
Sbjct: 368 PQVGGDGERRVGGELGRGGDGAALERGARVLVRVRAPLRRHRVALPLHRQPGVEVAVLEH 189
Query: 785 RRRVAEDEVHGAQHLAVAEELPVGVHVQRVLVPLE 889
RRVAE VHGA +A A ELP GV VQRVLV LE
Sbjct: 188 HRRVAEHVVHGAVDVAAAVELPEGVRVQRVLVRLE 84
Score = 84.5 bits (178), Expect(4) = 1e-036
Identities = 38/65 (58%), Positives = 40/65 (61%)
Frame = +3 / -3
Query: 771 QFWNSAAELPKMKSTVPSTSQSRKNCRLACTYSVSWYPSNRQL*NTDLSPCTCIATAWCP 950
Q WN+ A LP STVP TSQ R NCR C YSVSWY S *N D S ATAWC
Sbjct: 202 QSWNTTAALPNT*STVP*TSQPR*NCRRECVYSVSWYASKLHW*NVDRSAPERSATAWCF 23
Query: 951 SGPAV 965
+GPAV
Sbjct: 22 AGPAV 8
Score = 52.8 bits (109), Expect(4) = 1e-036
Identities = 29/67 (43%), Positives = 32/67 (47%)
Frame = +3 / -3
Query: 423 TW*PGQXXXXXXXXXXXXXXYSA**SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFH 602
TW PG YSA* SVL SP H HP+G + + TV SFH
Sbjct: 553 TWKPGHATLLLVSAPGPELLYSA*KSVLSA*SPSHGIHPAGSTSASTSDCMITVRE*SFH 374
Query: 603 GRPR*VA 623
GRPR*VA
Sbjct: 373 GRPR*VA 353
Score = 43.2 bits (88), Expect(4) = 1e-036
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +3 / -3
Query: 669 QPWSTMPVGMLGSVRPCAVTML 734
QPWS +PV GSVRPCAVT+L
Sbjct: 304 QPWSVVPVFWFGSVRPCAVTVL 239
Score = 37.3 bits (75), Expect(3) = 3e-023
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = +2 / -2
Query: 524 PLRPPFRPDEVADGALHHHRPRVLLPRPAEVGGDLE 631
P PP DE LH HR V LP P +VGGD E
Sbjct: 452 PRHPPGGVDERVHLRLHDHRAGVELPWPPQVGGDGE 345
Score = 33.6 bits (67), Expect(3) = 1e-071
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2 / +3
Query: 418 GQADATAFTAGAFIDGASWLQSTGTPNVMG 329
G ADA FT G + G WL TG P G
Sbjct: 561 GTADAANFTVGNMVLGDFWLPQTGVPFTSG 650
Score = 30.4 bits (60), Expect(4) = 1e-036
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3 / -3
Query: 327 NPMTLGVPVLCSHDAPSMKAPAVNAVASACPMT 425
+P+ G PV S +PS P V ASA P +
Sbjct: 652 DPLVNGTPVWGSQKSPSTMLPTVKLAASAVPFS 554
Score = 25.4 bits (49), Expect(3) = 3e-023
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1 / -1
Query: 871 CPGTPRTGSCRTPT 912
CPGTPR+ + RT T
Sbjct: 102 CPGTPRSCTGRTST 61
>gb|CW386938.1|CW386938 fsbb001f071b07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f071b07, DNA
sequence
Length = 617
Score = 261 bits (564), Expect = 2e-068
Identities = 101/187 (54%), Positives = 128/187 (68%)
Frame = -2 / +3
Query: 1003 GNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEV 824
G GF+ + + N AGP HQAVA+ V D + FY C F GYQDTLY H+ RQF+RDC+V
Sbjct: 54 GTGFLARDLTVENAAGPSKHQAVALRVNADLAAFYRCSFAGYQDTLYAHSLRQFYRDCDV 233
Query: 823 LGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQAL 644
GTVDF+FG++AA+ Q C + R+PG Q N+VTAQGR DPN TGIV+QG ++ L
Sbjct: 234 YGTVDFVFGDAAAVLQGCSLYARRPGPGQKNVVTAQGREDPNQNTGIVVQGGKVAAAADL 413
Query: 643 FPDRLQIATYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPG 464
P +++YLGRPWK Y+RTV +++ + L+ P GW EW G L TLYYAEY N GPG
Sbjct: 414 VPVLGNVSSYLGRPWKLYSRTVFVQTKMEALVHPRGWLEWNGTFALDTLYYAEYMNRGPG 593
Query: 463 AGTSKRV 443
A TS RV
Sbjct: 594 ADTSARV 614
Score = 142 bits (305), Expect = 8e-033
Identities = 77/173 (44%), Positives = 92/173 (53%)
Frame = +3 / -2
Query: 483 YSA**SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR*VAIWRRSGKSACSGT 662
YSA* SV + P HS+HP G + +++ TV SFHG PR* R+G + +
Sbjct: 574 YSA*YSVSSAKVPFHSSHPRGWTSASILVCTNTVRE*SFHGLPR*EETLPRTGTRSAAAA 395
Query: 663 MRQPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQSRK 842
P +TMPV LGS RPCAVT PG R Q ++AA PK KSTVP TSQSR
Sbjct: 394 TLPPCTTMPVFWLGSSRPCAVTTFFCPGPGRRA*RLQPCSTAAASPKTKSTVP*TSQSR* 215
Query: 843 NCRLACTYSVSWYPSNRQL*NTDLSPCTCIATAWCPSGPAVFTNPIDLQMNPL 1001
N R C VSW P+ Q * S T ATAWC GPA F+ NP+
Sbjct: 214 NWRRECA*RVSW*PAKLQR*KAARSAFTRSATAWCLLGPAAFSTVRSRARNPV 56
Score = 105 bits (225), Expect = 9e-022
Identities = 62/122 (50%), Positives = 67/122 (54%)
Frame = +2 / -1
Query: 524 PLRPPFRPDEVADGALHHHRPRVLLPRPAEVGGDLEAVGEERLLRHDAAALEHDARGHVG 703
PL P R DE LH H RV LPRPAEVGGD+ G+E D AAL DAR VG
Sbjct: 533 PLEPSSRVDERLHLGLHEHGARVELPRPAEVGGDVAEDGDEVGGGGDLAALHDDARVLVG 354
Query: 704 VRPPLRRHHVGLAVPGLAHRHEAVLEQRRRVAEDEVHGAQHLAVAEELPVGVHVQRVLVP 883
V P LRR V L A A L+ VAEDEV GA +AVA EL GV V+ VLV
Sbjct: 353 VLPALRRDDVLLPGARAARVEAAALQHGGGVAEDEVDGAVDVAVAVELAEGVRVEGVLVT 174
Query: 884 LE 889
E
Sbjct: 173 RE 168
>gb|BG356421.1|BG356421 EM1_22_D02.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 530
Score = 226 bits (489), Expect(3) = 2e-064
Identities = 89/96 (92%), Positives = 91/96 (94%)
Frame = -2 / +3
Query: 607 RPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVNWPGY 428
RPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTL YAEYANTGPGAGTSKRVNWPGY
Sbjct: 3 RPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLXYAEYANTGPGAGTSKRVNWPGY 182
Query: 427 HVIGQADATAFTAGAFIDGASWLQSTGTPNVMGFTK 320
VIGQA+AT FTAG FIDG +WLQSTGTPNVMGFTK
Sbjct: 183 RVIGQAEATHFTAGVFIDGMTWLQSTGTPNVMGFTK 290
Score = 160 bits (343), Expect(3) = 8e-044
Identities = 74/105 (70%), Positives = 75/105 (71%)
Frame = +3 / -2
Query: 294 LQSPDHYYPLVNPMTLGVPVLCSHDAPSMKAPAVNAVASACPMTW*PGQXXXXXXXXXXX 473
LQ + LV PMT GVPVL SH PSMK PAV VASACPMT *PGQ
Sbjct: 316 LQKKKKFVHLVKPMTFGVPVLWSHVMPSMKTPAVKCVASACPMTR*PGQLTLLLVPAPGP 137
Query: 474 XXXYSA**SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGR 608
YSA *SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGR
Sbjct: 136 VLAYSAX*SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGR 2
Score = 90.0 bits (190), Expect(4) = 2e-038
Identities = 39/68 (57%), Positives = 46/68 (67%)
Frame = +2 / -1
Query: 245 ACCMHEDTRAYHHRMHTAIPRSLLPFGESHDVGRAGALQP*RAVDEGAGGECRGVGLSDD 424
A CM T + + TA + + FGE+HDV RAGAL+P AVDE AGGE RG+GLSDD
Sbjct: 365 AACMQHTTAKNNEKKITAKKKKIRSFGEAHDVWRAGALEPRHAVDEDAGGEVRGLGLSDD 186
Query: 425 VVAWPVDP 448
VA PVDP
Sbjct: 185 AVARPVDP 162
Score = 75.8 bits (159), Expect(4) = 2e-038
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +2 / -1
Query: 521 HPLRPPFRPDEVADGALHHHRPRVLLPRP 607
HPLRPPFRPDEVADGALHHHRPRVLLP P
Sbjct: 89 HPLRPPFRPDEVADGALHHHRPRVLLPWP 3
Score = 37.3 bits (75), Expect(3) = 2e-064
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -3 / +2
Query: 261 SCMQHAFGFIRKLLAFL 211
+CMQHAFGF+R+ LAFL
Sbjct: 353 ACMQHAFGFVRERLAFL 403
Score = 35.0 bits (70), Expect(3) = 8e-044
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1 / -2
Query: 211 QKC*QFPDKPKSMLHA 258
QK * FPDKPKSMLHA
Sbjct: 403 QKS*PFPDKPKSMLHA 356
Score = 33.1 bits (66), Expect(4) = 2e-038
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2 / -3
Query: 203 YAHKNASSFRINPKACCMH 259
Y +K AS NPKACCMH
Sbjct: 411 YNNKKASRSLTNPKACCMH 355
Score = 22.6 bits (43), Expect(3) = 2e-064
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1 / +3
Query: 188 EAPVHACXGE*DDL 147
EAPVHAC DL
Sbjct: 420 EAPVHACTVNIGDL 461
Score = 22.6 bits (43), Expect(3) = 8e-044
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1 / -2
Query: 148 RSSYSPXHACTGAS 189
RS HACTGAS
Sbjct: 460 RSPIFTVHACTGAS 419
Score = 21.7 bits (41), Expect(4) = 2e-038
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / -3
Query: 170 MRAQELPAIY 199
MRAQELP+ Y
Sbjct: 438 MRAQELPSSY 409
>gb|CW339305.1|CW339305 104_840_11485203_116_36138_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485203, DNA
sequence
Length = 626
Score = 227 bits (491), Expect(2) = 5e-064
Identities = 88/158 (55%), Positives = 108/158 (68%)
Frame = -2 / -2
Query: 883 GYQDTLYVHANRQFFRDCEVLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTD 704
GYQDTLYVH+ RQFFR+C++ GT+DF+ GN+A + Q C + RKP +QSN+ TAQGR D
Sbjct: 625 GYQDTLYVHSLRQFFRECDMYGTIDFVSGNAAVVLQGCNLYARKPLPNQSNIFTAQGRED 446
Query: 703 PNMPTGIVLQGCRIVPEQALFPDRLQIATYLGRPWKEYARTVVMESTIGDLIRPEGWAEW 524
PN TGI + C++ L TYLGRPWK+Y+RTV ++S + LI P GW EW
Sbjct: 445 PNQNTGISIHRCKVAAAADLLQSSSSTKTYLGRPWKQYSRTVFLQSELDSLIAPAGWLEW 266
Query: 523 MGDLGLKTLYYAEYANTGPGAGTSKRVNWPGYHVIGQA 410
G+ L TLYY EY NTGPGAGTS RV W GY VI A
Sbjct: 265 DGNFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSA 152
Score = 137 bits (293), Expect(2) = 8e-036
Identities = 66/134 (49%), Positives = 75/134 (55%)
Frame = +3 / +3
Query: 483 YSA**SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR*VAIWRRSGKSACSGT 662
YS **SV + P HS+ P+G M TV Y FHGRPR*V + + +
Sbjct: 225 YSP**SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VLVEEEDCSRSAAAA 404
Query: 663 MRQPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQSRK 842
Q W MPV LGS RPCAV ML WL GLR Q ++ A LP+ KS VP S SRK
Sbjct: 405 TLQRWMEMPVFWLGSSRPCAVKMLLWLGSGLRAYRLQPCSTTAALPETKSMVPYMSHSRK 584
Query: 843 NCRLACTYSVSWYP 884
NCR CTYSVSW P
Sbjct: 585 NCRRECTYSVSW*P 626
Score = 39.1 bits (79), Expect(2) = 5e-064
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2 / -2
Query: 424 VIGQADATAFTAGAFIDGASWLQSTGTPNVMG 329
+ A+A+AFT G+FIDG WL T P G
Sbjct: 163 ITSAAEASAFTVGSFIDGDVWLAGTSIPFTTG 68
Score = 35.4 bits (71), Expect(2) = 8e-036
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / +3
Query: 330 PMTLGVPVLCSHDAPSMKAPAVNAVASA 413
P+ G+ V S +PSMK P VNA+ASA
Sbjct: 69 PVVKGMDVPASQTSPSMKEPTVNALASA 152
>gb|CW340403.1|CW340403 104_841_11485781_148_36147_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485781, DNA
sequence
Length = 675
Score = 156 bits (336), Expect(2) = 2e-060
Identities = 61/121 (50%), Positives = 84/121 (69%)
Frame = -2 / +1
Query: 1006 EGNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCE 827
+G+ F+ +G NTAG E QA+A+ V+GDK++F+NCR EG QDTL+ A RQF+R C
Sbjct: 40 DGDSFMAMKLGIKNTAGVEKQQALALRVKGDKAIFFNCRIEGNQDTLFAQAYRQFYRSCV 219
Query: 826 VLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQA 647
+ GTVDFI G++AA+FQ CL+ VR+P Q +VTAQ R D TG V+ C+IV ++
Sbjct: 220 ISGTVDFIMGDAAAVFQRCLLVVRQPRQGQPAVVTAQSRRDHQQTTGFVIHRCQIVADEE 399
Query: 646 L 644
L
Sbjct: 400 L 402
Score = 115 bits (246), Expect(2) = 3e-034
Identities = 59/116 (50%), Positives = 65/116 (56%)
Frame = +3 / -2
Query: 645 SACSGTMRQPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPS 824
S+ S T+ W T PV S R CAVT G RT RQ WN+AA P MKSTVP
Sbjct: 401 SSSSATIWHRWMTKPVVCWWSRRDCAVTTAGCPCRGCRTTSRQRWNTAAASPMMKSTVPE 222
Query: 825 TSQSRKNCRLACTYSVSWYPSNRQL*NTDLSPCTCIATAWCPSGPAVFTNPIDLQM 992
+Q R NCR AC SVSW PS RQL LSP T A+A C S PAVF P + M
Sbjct: 221 MTQLR*NCRYACAKSVSWLPSIRQLKKMALSPFTRSASACCFSTPAVFLMPSFIAM 54
Score = 98.2 bits (208), Expect(2) = 2e-060
Identities = 38/78 (48%), Positives = 49/78 (62%)
Frame = -2 / +1
Query: 625 IATYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKR 446
+ TYLGRPWKEYARTVVMES IG + +G+ W G L T ++ E+ N G GA + R
Sbjct: 442 VTTYLGRPWKEYARTVVMESIIGGFVHGQGYMPWEGKDDLXTAFFGEFRNGGDGANATGR 621
Query: 445 VNWPGYHVIGQADATAFT 392
G+HV+G+ A FT
Sbjct: 622 KEMKGFHVMGKGQALRFT 675
Score = 86.8 bits (183), Expect(2) = 2e-025
Identities = 42/83 (50%), Positives = 53/83 (63%)
Frame = +2 / -1
Query: 644 ERLLRHDAAALEHDARGHVGVRPPLRRHHVGLAVPGLAHRHEAVLEQRRRVAEDEVHGAQ 823
E L+ D A ++ +ARG + V P LR H L++P L H +A LE RRRVA DEVHGA
Sbjct: 402 ELLVGDDLAPVDDEARGLLVVPPRLRGDHRRLSLPRLPHHQQAALEHRRRVAHDEVHGAG 223
Query: 824 HLAVAEELPVGVHVQRVLVPLEP 892
A A ELPV + +RVLV L+P
Sbjct: 222 DDAAAVELPVRLREERVLVALDP 154
Score = 51.5 bits (106), Expect(2) = 3e-034
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = +2 / -1
Query: 524 PLRPPFRPDEVADGALHHHRPRVLLPRPAEVGGD 625
P P E AD LHHHRPRVLLPRPA+V D
Sbjct: 543 PRHVPLAVHEPADDGLHHHRPRVLLPRPAQVRRD 442
Score = 51.0 bits (105), Expect(2) = 2e-025
Identities = 22/39 (56%), Positives = 25/39 (64%)
Frame = +3 / -2
Query: 498 SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR 614
+V R P H +P PM+ SITTVLAYSFHGRPR
Sbjct: 569 AVXRSSLPSHGMYPWPCTNPPMMDSITTVLAYSFHGRPR 453
>gb|CW340402.1|CW340402 104_841_11485781_116_36146_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485781, DNA
sequence
Length = 672
Score = 131 bits (280), Expect(2) = 2e-060
Identities = 52/103 (50%), Positives = 71/103 (68%)
Frame = -2 / -2
Query: 952 EGHQAVAMHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEVLGTVDFIFGNSAALFQN 773
E QA+A+ V+GDK++F+NCR EG Q L+ A RQF+R C + GTVDFI G++AA+FQ
Sbjct: 671 EKQQALALRVKGDKAIFFNCRIEGNQAGLFAQAYRQFYRSCVISGTVDFIMGDAAAVFQR 492
Query: 772 CLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQAL 644
CL+ VR+P Q +VTAQ R D TG V+ C+IV ++ L
Sbjct: 491 CLLRVRQPRQGQPAVVTAQSRRDHQQTTGFVIHRCQIVADEEL 363
Score = 123 bits (264), Expect(2) = 2e-060
Identities = 48/101 (47%), Positives = 63/101 (62%)
Frame = -2 / -2
Query: 625 IATYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKR 446
+ TYLGRPWKEYARTVVMES IG + +G+ W G L T ++ E+ N G GA + R
Sbjct: 323 VTTYLGRPWKEYARTVVMESIIGGFVHGQGYMPWEGKDDLGTAFFGEFRNGGDGANATGR 144
Query: 445 VNWPGYHVIGQADATAFTAGAFIDGASWLQSTGTPNVMGFT 323
G+HV+G+ A FT G F+ GA W+ TGTP +G +
Sbjct: 143 KEMKGFHVMGKDKALRFTVGHFLHGADWIPETGTPVSLGLS 21
Score = 99.1 bits (210), Expect(3) = 1e-034
Identities = 50/101 (49%), Positives = 56/101 (55%)
Frame = +3 / +1
Query: 645 SACSGTMRQPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPS 824
S+ S T+ W T PV S R CAVT G RT RQ WN+AA P MKSTVP
Sbjct: 364 SSSSATIWHRWMTKPVVCWWSRRDCAVTTAGCPCRGCRTRSRQRWNTAAASPMMKSTVPE 543
Query: 825 TSQSRKNCRLACTYSVSWYPSNRQL*NTDLSPCTCIATAWC 947
+Q R NCR AC S +W PS RQL LSP T A+A C
Sbjct: 544 MTQLR*NCRYACAKSPAWLPSIRQLKKMALSPFTRSASACC 666
Score = 79.4 bits (167), Expect(2) = 5e-023
Identities = 40/83 (48%), Positives = 51/83 (61%)
Frame = +2 / +3
Query: 644 ERLLRHDAAALEHDARGHVGVRPPLRRHHVGLAVPGLAHRHEAVLEQRRRVAEDEVHGAQ 823
E L+ D A ++ +ARG + V P LR H L++P L H +A LE RRRVA DEVHGA
Sbjct: 363 ELLVGDDLAPVDDEARGLLVVPPRLRGDHRRLSLPRLPHPQQAALEHRRRVAHDEVHGAG 542
Query: 824 HLAVAEELPVGVHVQRVLVPLEP 892
A A ELPV + + LV L+P
Sbjct: 543 DDAAAVELPVRLREEPRLVALDP 611
Score = 51.5 bits (106), Expect(3) = 1e-034
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = +2 / +3
Query: 524 PLRPPFRPDEVADGALHHHRPRVLLPRPAEVGGD 625
P P E AD LHHHRPRVLLPRPA+V D
Sbjct: 222 PRHVPLAVHEPADDGLHHHRPRVLLPRPAQVRRD 323
Score = 50.1 bits (103), Expect(2) = 5e-023
Identities = 22/39 (56%), Positives = 25/39 (64%)
Frame = +3 / +1
Query: 498 SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR 614
+V R P H +P PM+ SITTVLAYSFHGRPR
Sbjct: 196 AVPRSSLPSHGMYPWPCTNPPMMDSITTVLAYSFHGRPR 312
Score = 35.9 bits (72), Expect(3) = 1e-034
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3 / +1
Query: 330 PMTLGVPVLCSHDAPSMKAPAVNAVASACPMTW*P 434
P GVPV AP K P VN A + P+TW P
Sbjct: 28 PKLTGVPVSGIQSAPCRKWPTVNRSALSLPITWNP 132
>gb|CW089034.1|CW089034 104_434_10948469_114_32601_027 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948469, DNA
sequence
Length = 620
Score = 130 bits (279), Expect(2) = 9e-060
Identities = 50/96 (52%), Positives = 68/96 (70%)
Frame = -2 / +2
Query: 931 MHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEVLGTVDFIFGNSAALFQNCLMTVRK 752
+ V+GDK++F+NCR EG QDTL+ A RQF+R C + GTVDFI G++AA+FQ CL+ VR+
Sbjct: 2 LRVKGDKAIFFNCRIEGNQDTLFAQAYRQFYRSCVISGTVDFIMGDAAAVFQRCLLVVRQ 181
Query: 751 PGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQAL 644
P Q +VTAQ R D TG V+ C+IV ++ L
Sbjct: 182 PRQGQPAVVTAQSRRDHQQTTGFVIHRCQIVADEEL 289
Score = 122 bits (260), Expect(2) = 9e-060
Identities = 47/95 (49%), Positives = 60/95 (63%)
Frame = -2 / +2
Query: 625 IATYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKR 446
+ TYLGRPWKEYARTVVMES IG + +G+ W G L T ++ E+ N G GA + R
Sbjct: 329 VTTYLGRPWKEYARTVVMESIIGGFVHGQGYMPWEGKDDLGTAFFGEFRNGGDGANATGR 508
Query: 445 VNWPGYHVIGQADATAFTAGAFIDGASWLQSTGTP 341
G+HV+G+ A FT G F+ GA W+ TGTP
Sbjct: 509 KEMKGFHVMGKDKALRFTVGHFLHGADWIPETGTP 613
Score = 99.6 bits (211), Expect(3) = 3e-034
Identities = 49/94 (52%), Positives = 53/94 (56%)
Frame = +3 / -3
Query: 645 SACSGTMRQPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPS 824
S+ S T+ W T PV S R CAVT G RT RQ WN+AA P MKSTVP
Sbjct: 288 SSSSATIWHRWMTKPVVCWWSRRDCAVTTAGCPCRGCRTTSRQRWNTAAASPMMKSTVPE 109
Query: 825 TSQSRKNCRLACTYSVSWYPSNRQL*NTDLSPCT 926
+Q R NCR AC SVSW PS RQL LSP T
Sbjct: 108 MTQLR*NCRYACAKSVSWLPSIRQLKKMALSPFT 7
Score = 86.8 bits (183), Expect(2) = 3e-025
Identities = 42/83 (50%), Positives = 53/83 (63%)
Frame = +2 / -2
Query: 644 ERLLRHDAAALEHDARGHVGVRPPLRRHHVGLAVPGLAHRHEAVLEQRRRVAEDEVHGAQ 823
E L+ D A ++ +ARG + V P LR H L++P L H +A LE RRRVA DEVHGA
Sbjct: 289 ELLVGDDLAPVDDEARGLLVVPPRLRGDHRRLSLPRLPHHQQAALEHRRRVAHDEVHGAG 110
Query: 824 HLAVAEELPVGVHVQRVLVPLEP 892
A A ELPV + +RVLV L+P
Sbjct: 109 DDAAAVELPVRLREERVLVALDP 41
Score = 51.5 bits (106), Expect(3) = 3e-034
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = +2 / -2
Query: 524 PLRPPFRPDEVADGALHHHRPRVLLPRPAEVGGD 625
P P E AD LHHHRPRVLLPRPA+V D
Sbjct: 430 PRHVPLAVHEPADDGLHHHRPRVLLPRPAQVRRD 329
Score = 50.1 bits (103), Expect(2) = 3e-025
Identities = 22/39 (56%), Positives = 25/39 (64%)
Frame = +3 / -3
Query: 498 SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR 614
+V R P H +P PM+ SITTVLAYSFHGRPR
Sbjct: 456 AVPRSSLPSHGMYPWPCTNPPMMDSITTVLAYSFHGRPR 340
Score = 34.1 bits (68), Expect(3) = 3e-034
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +3 / -3
Query: 342 GVPVLCSHDAPSMKAPAVNAVASACPMTW*P 434
GVPV AP K P VN A + P+TW P
Sbjct: 612 GVPVSGIQSAPCRKWPTVNRSALSLPITWNP 520
>gb|CW280823.1|CW280823 104_756_11407836_148_35454_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11407836, DNA
sequence
Length = 644
Score = 155 bits (333), Expect(2) = 2e-059
Identities = 61/114 (53%), Positives = 80/114 (70%)
Frame = -2 / +2
Query: 1003 GNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEV 824
G GFI K + +N+AGP QAVA+ V GD+SV Y C +G+QDTL+ H+NRQF+ D +V
Sbjct: 65 GAGFIAKGVSILNSAGPGQGQAVALLVSGDRSVVYQCEVKGHQDTLFAHSNRQFYGDTDV 244
Query: 823 LGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRI 662
GTVDFIFGN+AA+ Q C + R+P Q ++VTAQGR DPN TG + CR+
Sbjct: 245 SGTVDFIFGNAAAVLQRCGIQARRPRPGQQDVVTAQGRADPNQNTGFSIHRCRV 406
Score = 99.1 bits (210), Expect(2) = 4e-026
Identities = 53/111 (47%), Positives = 57/111 (51%)
Frame = +3 / -3
Query: 666 RQPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQSRKN 845
R W PV GS RPCAVT GL M Q ++AA LPKMKSTVP TS S N
Sbjct: 402 RHRWMENPVFWFGSARPCAVTTSCCPGRGLLAWMPQRCSTAAALPKMKSTVPETSVSP*N 223
Query: 846 CRLACTYSVSWYPSNRQL*NTDLSPCTCIATAWCPSGPAVFTNPIDLQMNP 998
RL C SVSW P T+ SP T ATAW GPA+ L M P
Sbjct: 222 WRLECANSVSW*PFTSHWYTTERSPLTSRATAWPCPGPALLRMLTPLAMKP 70
Score = 95.9 bits (203), Expect(2) = 2e-059
Identities = 35/72 (48%), Positives = 43/72 (59%)
Frame = -2 / +2
Query: 640 PDRLQIATYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGA 461
PD + YLGRPW+ YAR VM +++ + P GW +W G TLYY EY NTG GA
Sbjct: 416 PDLGETPVYLGRPWRRYARVAVMATSLDGSVAPAGWLQWSGQPAPGTLYYGEYRNTGAGA 595
Query: 460 GTSKRVNWPGYH 425
T+ RV W G H
Sbjct: 596 ATAGRVTWTGVH 631
Score = 40.9 bits (83), Expect(2) = 4e-026
Identities = 23/72 (31%), Positives = 29/72 (40%)
Frame = +3 / -3
Query: 426 W*PGQXXXXXXXXXXXXXXYSA**SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHG 605
W P Q YS * V P H +HP+G +++T AY HG
Sbjct: 630 WTPVQVTRPAVAAPAPVFRYSP*YRVPGAGWPDHCSHPAGATEPSREVAMTATRAYRRHG 451
Query: 606 RPR*VAIWRRSG 641
RPR + RSG
Sbjct: 450 RPRYTGVSPRSG 415
>gb|CW266135.1|CW266135 104_735_11232263_148_35265_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232263, DNA
sequence
Length = 623
Score = 213 bits (460), Expect(2) = 1e-058
Identities = 83/154 (53%), Positives = 106/154 (68%)
Frame = -2 / -3
Query: 859 HANRQFFRDCEVLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIV 680
H+ RQF+RDC+V GTVDF+FG++AA+ Q C + R+PG Q N+VTAQGR DPN TGIV
Sbjct: 618 HSLRQFYRDCDVYGTVDFVFGDAAAVLQGCSLYARRPGPGQKNVVTAQGREDPNQNTGIV 439
Query: 679 LQGCRIVPEQALFPDRLQIATYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKT 500
+QG ++ L P +++YLGRPWK Y+RTV +++ + L+ P GW EW G L T
Sbjct: 438 VQGGKVAAAADLVPVLGNVSSYLGRPWKLYSRTVFVQTKMEALVHPRGWLEWNGTFALDT 259
Query: 499 LYYAEYANTGPGAGTSKRVNWPGYHVIGQADATA 398
LYYAEY N GPGA TS RV W GYHV+ A A
Sbjct: 258 LYYAEYMNRGPGADTSARVAWSGYHVLTNATDAA 157
Score = 113 bits (241), Expect = 6e-024
Identities = 63/154 (40%), Positives = 76/154 (49%)
Frame = +3 / +2
Query: 399 AVASACPMTW*PGQXXXXXXXXXXXXXXYSA**SVLRPRSPIHSAHPSGLMRSPMVLSIT 578
A + A TW P YSA* SV + P HS+HP G + +++
Sbjct: 158 AASVALVSTWYPDHATLAEVSAPGPRFMYSA*YSVSSAKVPFHSSHPRGWTSASILVCTN 337
Query: 579 TVLAYSFHGRPR*VAIWRRSGKSACSGTMRQPWSTMPVGMLGSVRPCAVTMLDWLSPGLR 758
TV SFHG PR* R+G + + P +TMPV LGS RPCAVT PG R
Sbjct: 338 TVRE*SFHGLPR*EETLPRTGTRSAAAATLPPCTTMPVFWLGSSRPCAVTTFFCPGPGRR 517
Query: 759 TVMRQFWNSAAELPKMKSTVPSTSQSRKNCRLAC 860
Q ++AA PK KSTVP TSQSR N R C
Sbjct: 518 A*RLQPCSTAAASPKTKSTVP*TSQSR*NWRREC 619
Score = 35.4 bits (71), Expect(2) = 1e-058
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -2 / -3
Query: 409 DATAFTAGAFIDGASWLQSTGTPNVMGFT 323
DA FT FI G WL ST P +GFT
Sbjct: 165 DAANFTVLDFIQGDLWLNSTSFPYTLGFT 79
>gb|CW369334.1|CW369334 fsbb001f043l06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f043l06, DNA
sequence
Length = 712
Score = 170 bits (366), Expect(2) = 4e-058
Identities = 67/114 (58%), Positives = 80/114 (70%)
Frame = -2 / +1
Query: 1003 GNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEV 824
G GF+ +M F NTAGP HQAVA+ D S FY C FE YQDTLY H+ RQF+R C+V
Sbjct: 193 GTGFVAVNMTFRNTAGPAKHQAVALRSGADLSTFYQCSFEAYQDTLYTHSLRQFYRGCDV 372
Query: 823 LGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRI 662
GTVD++FGN+A +FQ+C + R P QSN VTAQGRTDPN TG LQGC +
Sbjct: 373 YGTVDYVFGNAAVVFQDCNLYSRLPMQGQSNTVTAQGRTDPNQNTGTTLQGCTV 534
Score = 92.7 bits (196), Expect(3) = 5e-032
Identities = 42/77 (54%), Positives = 46/77 (59%)
Frame = +3 / -3
Query: 771 QFWNSAAELPKMKSTVPSTSQSRKNCRLACTYSVSWYPSNRQL*NTDLSPCTCIATAWCP 950
Q WN+ A LP STVP TSQ R NCR C YSVSWY S *N D S ATAWC
Sbjct: 425 QSWNTTAALPNT*STVP*TSQPR*NCRRECVYSVSWYASKLHW*NVDRSAPERSATAWCF 246
Query: 951 SGPAVFTNPIDLQMNPL 1001
+GPAVF N + NP+
Sbjct: 245 AGPAVFRNVMFTATNPV 195
Score = 85.4 bits (180), Expect(3) = 3e-023
Identities = 50/95 (52%), Positives = 52/95 (54%)
Frame = +2 / -2
Query: 605 PAEVGGDLEAVGEERLLRHDAAALEHDARGHVGVRPPLRRHHVGLAVPGLAHRHEAVLEQ 784
P G VG E D AALE AR V VR PLRRH V L + AVLE
Sbjct: 591 PQVGGDGERRVGGELGRGGDGAALERGARVLVRVRAPLRRHRVALPLHRQPGVEVAVLEH 412
Query: 785 RRRVAEDEVHGAQHLAVAEELPVGVHVQRVLVPLE 889
RRVAE VHGA +A A ELP GV VQRVLV LE
Sbjct: 411 HRRVAEHVVHGAVDVAAAVELPEGVRVQRVLVRLE 307
Score = 76.7 bits (161), Expect(2) = 4e-058
Identities = 27/46 (58%), Positives = 34/46 (73%)
Frame = -2 / +1
Query: 625 IATYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYA 488
+ATYLGRPWK Y+RTV+M+S + L+ P GW W GD L TL+YA
Sbjct: 574 VATYLGRPWKLYSRTVIMQSEVDALVDPAGWMPWDGDYALSTLFYA 711
Score = 43.2 bits (88), Expect(3) = 5e-032
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +3 / -3
Query: 669 QPWSTMPVGMLGSVRPCAVTML 734
QPWS +PV GSVRPCAVT+L
Sbjct: 527 QPWSVVPVFWFGSVRPCAVTVL 462
Score = 41.8 bits (85), Expect(3) = 5e-032
Identities = 23/45 (51%), Positives = 26/45 (57%)
Frame = +3 / -3
Query: 489 A**SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR*VA 623
A* SVL SP H HP+G + + TV SFHGRPR*VA
Sbjct: 710 A*KSVLSA*SPSHGIHPAGSTSASTSDCMITVRE*SFHGRPR*VA 576
Score = 37.3 bits (75), Expect(3) = 3e-023
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = +2 / -2
Query: 524 PLRPPFRPDEVADGALHHHRPRVLLPRPAEVGGDLE 631
P PP DE LH HR V LP P +VGGD E
Sbjct: 675 PRHPPGGVDERVHLRLHDHRAGVELPWPPQVGGDGE 568
Score = 25.4 bits (49), Expect(3) = 3e-023
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1 / -1
Query: 871 CPGTPRTGSCRTPT 912
CPGTPR+ + RT T
Sbjct: 325 CPGTPRSCTGRTST 284
>gb|CW172749.1|CW172749 104_584_11156458_148_36543_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156458, DNA
sequence
Length = 626
Score = 215 bits (464), Expect = 1e-054
Identities = 82/157 (52%), Positives = 105/157 (66%)
Frame = -2 / +1
Query: 1003 GNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEV 824
GN F+ + + N+AGP HQAVA+ V D S FY C F GYQDTLYVH+ RQFFRDC++
Sbjct: 151 GNNFLARDLTIENSAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRDCDI 330
Query: 823 LGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQAL 644
GT+DF+FGN+A + Q C + RKP +QSN+ TAQGR DPN TGI + C++ L
Sbjct: 331 YGTIDFVFGNAAVVLQGCNLYARKPLPNQSNIFTAQGREDPNQNTGISIHRCKVAAAADL 510
Query: 643 FPDRLQIATYLGRPWKEYARTVVMESTIGDLIRPEGW 533
TYLGRPWK+Y+RTV ++S + LI P GW
Sbjct: 511 LQSSSSTKTYLGRPWKQYSRTVFLQSELDSLIAPAGW 621
Score = 156 bits (336), Expect = 4e-037
Identities = 75/148 (50%), Positives = 84/148 (56%)
Frame = +3 / -1
Query: 528 SAHPSGLMRSPMVLSITTVLAYSFHGRPR*VAIWRRSGKSACSGTMRQPWSTMPVGMLGS 707
S+ P+G M TV Y FHGRPR*V + + + Q W MPV LGS
Sbjct: 626 SSQPAGAMSESSSDCRKTVREYCFHGRPR*VLVEEEDCSRSAAAATLQRWMEMPVFWLGS 447
Query: 708 VRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQSRKNCRLACTYSVSWYPS 887
RPCAV ML WL GLR Q ++ A LPK KS VP SQSRKNCR CTYSVSW P+
Sbjct: 446 SRPCAVKMLLWLGSGLRAYRLQPCSTTAALPKTKSMVP*MSQSRKNCRRECTYSVSW*PT 267
Query: 888 NRQL*NTDLSPCTCIATAWCPSGPAVFT 971
Q *N D S T ATAWC GPA F+
Sbjct: 266 KLQR*NADRSAPTRSATAWCLDGPAEFS 183
>gb|CW400557.1|CW400557 fsbb001f090o22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f090o22, DNA
sequence
Length = 492
Score = 118 bits (252), Expect(2) = 2e-053
Identities = 42/64 (65%), Positives = 47/64 (73%)
Frame = -2 / +1
Query: 616 YLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVNW 437
YLGRPW+ Y+RTVVMES + + P GW EW G L TLYY EY NTGPGAGTS+RV W
Sbjct: 277 YLGRPWRRYSRTVVMESFLDRSVSPAGWLEWSGQFALSTLYYGEYGNTGPGAGTSRRVTW 456
Query: 436 PGYH 425
PG H
Sbjct: 457 PGVH 468
Score = 113 bits (241), Expect(2) = 2e-053
Identities = 42/78 (53%), Positives = 55/78 (70%)
Frame = -2 / +1
Query: 895 CRFEGYQDTLYVHANRQFFRDCEVLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQ 716
C + YQDTLYVH+ RQF+ ++ GTVDFIFGN+A + Q+C + R+P Q + VTAQ
Sbjct: 4 CGIQAYQDTLYVHSGRQFYAGTDIAGTVDFIFGNAAVVLQSCDIQARRPSPGQEDTVTAQ 183
Query: 715 GRTDPNMPTGIVLQGCRI 662
GRTDPN TGI + CR+
Sbjct: 184 GRTDPNQNTGISIHRCRV 237
Score = 81.3 bits (171), Expect(2) = 4e-024
Identities = 38/69 (55%), Positives = 42/69 (60%)
Frame = +3 / -2
Query: 675 WSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQSRKNCRL 854
W MPV GSVRPCAVT+ GLR M Q ++ A LPKMKSTVP+ S NCR
Sbjct: 224 WMEMPVFWFGSVRPCAVTVSSCPGLGLRAWMSQLCSTTAALPKMKSTVPAMSVPA*NCRP 45
Query: 855 ACTYSVSWY 881
T SVSWY
Sbjct: 44 EWT*SVSWY 18
Score = 51.9 bits (107), Expect(2) = 4e-024
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +3 / -2
Query: 483 YSA**SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR*VAI 626
YS * SVLR P HS+HP+G LS+TTV Y HGRPR* +
Sbjct: 410 YSP*YSVLRANCPDHSSHPAGETDRSRKLSMTTVREYLRHGRPR*TGV 267
>gb|CW276959.1|CW276959 104_750_11405768_116_35395_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405768, DNA
sequence
Length = 617
Score = 115 bits (245), Expect(3) = 2e-051
Identities = 43/67 (64%), Positives = 49/67 (73%)
Frame = -2 / -2
Query: 619 TYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVN 440
T+LGRPWK Y+RTVVM S + + GW EW GD LKTL+Y EY N GPGA T+ RVN
Sbjct: 391 TFLGRPWKAYSRTVVMLSYLDAHVDARGWLEWDGDFALKTLFYGEYQNEGPGAATAGRVN 212
Query: 439 WPGYHVI 419
WPGYHVI
Sbjct: 211 WPGYHVI 191
Score = 91.3 bits (193), Expect(3) = 2e-051
Identities = 37/68 (54%), Positives = 44/68 (64%)
Frame = -2 / -2
Query: 841 FRDCEVLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRI 662
+R+C V GTVDF+FGN+AA+ Q C + R P Q N VTAQGR DPN TG L CR+
Sbjct: 616 YRECFVSGTVDFVFGNAAAVLQGCALAARLPLRGQQNAVTAQGREDPNQNTGTSLHRCRV 437
Query: 661 VPEQALFP 638
VP L P
Sbjct: 436 VPAPDLAP 413
Score = 71.2 bits (149), Expect(3) = 2e-026
Identities = 33/68 (48%), Positives = 39/68 (57%)
Frame = +3 / +3
Query: 636 SGKSACSGTMRQPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKST 815
+G + +GT R W +PV LGS RPCAVT W G R Q ++AA LPK KST
Sbjct: 411 TGARSGAGTTRHLWRDVPVFWLGSSRPCAVTAFCWPRRGRRAASAQPCSTAAALPKTKST 590
Query: 816 VPSTSQSR 839
VP T SR
Sbjct: 591 VPDTKHSR 614
Score = 57.4 bits (119), Expect(3) = 2e-026
Identities = 29/65 (44%), Positives = 34/65 (52%)
Frame = +3 / +3
Query: 420 MTW*PGQXXXXXXXXXXXXXXYSA**SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSF 599
MTW*PGQ YS * SVL +SP HS+HP + S+TTV +F
Sbjct: 192 MTW*PGQLTRPAVAAPGPSFWYSP*KSVLSAKSPSHSSHPLASTCASRYDSMTTVRE*AF 371
Query: 600 HGRPR 614
HGRPR
Sbjct: 372 HGRPR 386
Score = 36.8 bits (74), Expect(3) = 2e-051
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -2
Query: 406 ATAFTAGAFIDGASWLQSTGTPNVMG 329
A FT G FI G +WL TG P + G
Sbjct: 175 AVQFTVGQFIQGGNWLNGTGVPYIEG 98
Score = 30.4 bits (60), Expect(3) = 2e-026
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2 / +2
Query: 326 ESHDVGRAGALQP*RAVDEGAGGECRG 406
E+ DVG AGA++P ++E A GE G
Sbjct: 95 ETLDVGHAGAVEPVATLNELADGELHG 175
>gb|BG049225.1|BG049225 OV1_17_B10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 661
Score = 109 bits (232), Expect(2) = 8e-033
Identities = 46/74 (62%), Positives = 51/74 (68%)
Frame = +3 / -1
Query: 657 GTMRQPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQS 836
G+M Q W T+P L S+RPCAVTM WLS LRT MRQFWN+ LPKMKS VP + S
Sbjct: 223 GSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMKSMVPVMTHS 44
Query: 837 RKNCRLACTYSVSW 878
R CRL C YSVSW
Sbjct: 43 R*YCRLVCVYSVSW 2
Score = 106 bits (226), Expect(3) = 2e-050
Identities = 40/74 (54%), Positives = 53/74 (71%)
Frame = -2 / +3
Query: 877 QDTLYVHANRQFFRDCEVLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPN 698
QDTLY H +RQ++R+C + GT+DFIFGN+ +FQNCL+ VRK D+Q N+VTAQGR +
Sbjct: 3 QDTLYTHTSRQYYRECVITGTIDFIFGNAQVVFQNCLIQVRKCMDNQQNIVTAQGRKERR 182
Query: 697 MPTGIVLQGCRIVP 656
G V+ C I P
Sbjct: 183 SAGGTVIHNCTIEP 224
Score = 105 bits (223), Expect(3) = 2e-050
Identities = 38/66 (57%), Positives = 48/66 (72%)
Frame = -2 / +3
Query: 628 QIATYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSK 449
++ T+LGRPWKE++RT+ ++S IG I P+GW W+GD GL T YYAE N G GA TSK
Sbjct: 258 KLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSK 437
Query: 448 RVNWPG 431
RV W G
Sbjct: 438 RVKWRG 455
Score = 53.3 bits (110), Expect(2) = 8e-033
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +3 / -1
Query: 486 SA**SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR 614
SA** VLRP+SP H +HP G M+ P+ + +V SFHGRPR
Sbjct: 400 SA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPR 272
Score = 28.1 bits (55), Expect(3) = 2e-050
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2 / +3
Query: 397 FTAGAFIDGASWLQSTGTPNVMG 329
+T +FI G WL G P ++G
Sbjct: 492 YTVESFIQGQHWLPQLGVPFILG 560
>gb|BG048275.1|BG048275 OV1_16_B07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 115 bits (246), Expect(2) = 1e-034
Identities = 48/76 (63%), Positives = 53/76 (69%)
Frame = +3 / -2
Query: 657 GTMRQPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQS 836
G+M Q W T+P L S+RPCAVTM WLS LRT MRQFWN+ LPKMKS VP + S
Sbjct: 230 GSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMKSMVPVMTHS 51
Query: 837 RKNCRLACTYSVSWYP 884
R CRL C YSVSWYP
Sbjct: 50 R*YCRLVCVYSVSWYP 3
Score = 113 bits (241), Expect(2) = 2e-049
Identities = 42/77 (54%), Positives = 56/77 (72%)
Frame = -2 / +1
Query: 886 EGYQDTLYVHANRQFFRDCEVLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRT 707
+GYQDTLY H +RQ++R+C + GT+DFIFGN+ +FQNCL+ VRK D+Q N+VTAQGR
Sbjct: 1 DGYQDTLYTHTSRQYYRECVITGTIDFIFGNAQVVFQNCLIQVRKCMDNQQNIVTAQGRK 180
Query: 706 DPNMPTGIVLQGCRIVP 656
+ G V+ C I P
Sbjct: 181 ERRSAGGTVIHNCTIEP 231
Score = 105 bits (223), Expect(2) = 2e-049
Identities = 38/66 (57%), Positives = 48/66 (72%)
Frame = -2 / +1
Query: 628 QIATYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSK 449
++ T+LGRPWKE++RT+ ++S IG I P+GW W+GD GL T YYAE N G GA TSK
Sbjct: 265 KLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSK 444
Query: 448 RVNWPG 431
RV W G
Sbjct: 445 RVKWRG 462
Score = 53.3 bits (110), Expect(2) = 1e-034
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +3 / -2
Query: 486 SA**SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR 614
SA** VLRP+SP H +HP G M+ P+ + +V SFHGRPR
Sbjct: 407 SA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPR 279
>gb|CW241951.1|CW241951 104_701_11219058_148_37553_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11219058, DNA
sequence
Length = 563
Score = 142 bits (305), Expect(3) = 6e-049
Identities = 56/112 (50%), Positives = 69/112 (61%)
Frame = -2 / +1
Query: 1003 GNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEV 824
G GF+ + + F NTAGP HQAVA+ V D+S F+ EG+QDTLY H+ RQ +RDC V
Sbjct: 22 GAGFVARDLTFRNTAGPAAHQAVALRVDSDRSAFFRVAVEGHQDTLYAHSLRQLYRDCRV 201
Query: 823 LGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGC 668
GTVDF+FGN + Q L+ Q+ VTAQGR DPN TG GC
Sbjct: 202 AGTVDFVFGNGIVVVQRSLVATLPLAPGQTGSVTAQGRKDPNQNTGFSFHGC 357
Score = 116 bits (247), Expect(2) = 2e-029
Identities = 53/110 (48%), Positives = 59/110 (53%)
Frame = +3 / -1
Query: 669 QPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQSRKNC 848
QPW PV LGS RPCAVT+ W R + LPK KSTVP+T QSR +C
Sbjct: 356 QPWKEKPVFWLGSFRPCAVTLPVWPGASGSVATRLRCTTTMPLPKTKSTVPATRQSR*SC 177
Query: 849 RLACTYSVSWYPSNRQL*NTDLSPCTCIATAWCPSGPAVFTNPIDLQMNP 998
R C YSVSW PS + S T ATAWC +GPAVF N NP
Sbjct: 176 RSECAYSVSWCPSTATRKKAERSESTRSATAWCAAGPAVFLNVRSRATNP 27
Score = 56.5 bits (117), Expect(3) = 6e-049
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -2 / +1
Query: 619 TYLGRPWKEYARTVVMESTIGDLIRPEGWAEW 524
TYLGRPWK ++R VVMES +G I+ GW EW
Sbjct: 379 TYLGRPWKPFSRVVVMESYLGPGIQARGWLEW 474
Score = 35.9 bits (72), Expect(3) = 6e-049
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2 / +1
Query: 511 GLKTLYYAEYANTGPGAG 458
GL TL+Y EY N GPGAG
Sbjct: 505 GLATLFYGEYKNYGPGAG 558
Score = 35.0 bits (70), Expect(2) = 2e-029
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3 / -1
Query: 525 HSAHPSGLMRSPMVLSITTVLAYSFHGRPR 614
HS+HP + P SITT FHGRPR
Sbjct: 473 HSSHPRA*IPGPR*DSITTTREKGFHGRPR 384
>gb|CW192234.1|CW192234 104_614_11178915_148_36944_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11178915, DNA
sequence
Length = 655
Score = 105 bits (223), Expect(3) = 1e-047
Identities = 38/66 (57%), Positives = 48/66 (72%)
Frame = -2 / -2
Query: 628 QIATYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSK 449
++ T+LGRPWKE++RT+ ++S IG I P+GW W+GD GL T YYAE N G GA TSK
Sbjct: 408 KLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSK 229
Query: 448 RVNWPG 431
RV W G
Sbjct: 228 RVKWRG 211
Score = 100 bits (213), Expect(2) = 3e-030
Identities = 43/71 (60%), Positives = 48/71 (67%)
Frame = +3 / +2
Query: 657 GTMRQPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQS 836
G+M Q W T+P L S+RPCAVTM WLS LRT MRQFWN+ LPKMKS VP + S
Sbjct: 443 GSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMKSMVPVMTHS 622
Query: 837 RKNCRLACTYS 869
R CRL C YS
Sbjct: 623 R*YCRLVCVYS 655
Score = 99.1 bits (210), Expect(3) = 1e-047
Identities = 37/71 (52%), Positives = 50/71 (70%)
Frame = -2 / -2
Query: 868 LYVHANRQFFRDCEVLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPT 689
LY H +RQ++R+C + GT+DFIFGN+ +FQNCL+ VRK D+Q N+VTAQGR +
Sbjct: 654 LYTHTSRQYYRECVITGTIDFIFGNAQVVFQNCLIQVRKCMDNQQNIVTAQGRKERRSAG 475
Query: 688 GIVLQGCRIVP 656
G V+ C I P
Sbjct: 474 GTVIHNCTIEP 442
Score = 53.3 bits (110), Expect(2) = 3e-030
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +3 / +2
Query: 486 SA**SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR 614
SA** VLRP+SP H +HP G M+ P+ + +V SFHGRPR
Sbjct: 266 SA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPR 394
Score = 26.3 bits (51), Expect(3) = 1e-047
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -2 / -2
Query: 397 FTAGAFIDGASWLQSTGTPNVMG 329
+T +FI G WL G P + G
Sbjct: 174 YTVESFIQGQHWLPQLGVPFIPG 106
>gb|CW221063.1|CW221063 104_656_11197697_148_37167_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197697, DNA
sequence
Length = 667
Score = 121 bits (259), Expect(3) = 5e-047
Identities = 43/69 (62%), Positives = 54/69 (78%)
Frame = -2 / -2
Query: 625 IATYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKR 446
+ATYLGRPWK Y+RTV+M+S + L+ P GW W GD L TL+YAEY N+GPGA TS+R
Sbjct: 480 VATYLGRPWKLYSRTVIMQSEVDALVDPAGWMPWDGDYALSTLFYAEYNNSGPGADTSRR 301
Query: 445 VNWPGYHVI 419
V WPG+HV+
Sbjct: 300 VAWPGFHVL 274
Score = 73.5 bits (154), Expect(3) = 5e-047
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = -2 / -2
Query: 808 FIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRI 662
++FGN+A +FQ+C + R P QSN VTAQGRTDPN TG LQGC +
Sbjct: 666 YVFGNAAVVFQDCNLYSRLPMQGQSNTVTAQGRTDPNQNTGTTLQGCTV 520
Score = 33.6 bits (67), Expect(3) = 5e-047
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2 / -2
Query: 418 GQADATAFTAGAFIDGASWLQSTGTPNVMG 329
G ADA FT G + G WL TG P G
Sbjct: 270 GTADAANFTVGNMVLGDFWLPQTGVPFTSG 181
>gb|CW057246.1|CW057246 104_299_10518117_115_30171 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518117, DNA
sequence
Length = 581
Score = 188 bits (404), Expect = 2e-046
Identities = 75/93 (80%), Positives = 79/93 (84%)
Frame = -2 / -3
Query: 1084 PTQTVVTGDKSNXXXXXXXXXXXXXAEGNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSV 905
PT+TVVTGDKSN AEGNGFICKSMGFVNTAGP+GHQAVAMHVQGD SV
Sbjct: 279 PTKTVVTGDKSNTGGFATIATPTFSAEGNGFICKSMGFVNTAGPDGHQAVAMHVQGDMSV 100
Query: 904 FYNCRFEGYQDTLYVHANRQFFRDCEVLGTVDF 806
F+NCRFEGYQDTLYVHANRQFFR+CEVLGTVDF
Sbjct: 99 FFNCRFEGYQDTLYVHANRQFFRNCEVLGTVDF 1
Score = 147 bits (315), Expect = 3e-034
Identities = 58/65 (89%), Positives = 59/65 (90%)
Frame = +3 / +2
Query: 807 KSTVPSTSQSRKNCRLACTYSVSWYPSNRQL*NTDLSPCTCIATAWCPSGPAVFTNPIDL 986
KSTVPSTSQ RKNCR ACTYSVSWYPSNRQL NTD+SPCTCIATAW PSGPAV T PIDL
Sbjct: 2 KSTVPSTSQLRKNCRFACTYSVSWYPSNRQLKNTDMSPCTCIATAW*PSGPAVLTKPIDL 181
Query: 987 QMNPL 1001
QMNPL
Sbjct: 182 QMNPL 196
>gb|CW441491.1|CW441491 fsbb001f160k16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f160k16, DNA
sequence
Length = 538
Score = 133 bits (285), Expect(3) = 2e-046
Identities = 48/73 (65%), Positives = 56/73 (76%)
Frame = -2 / -1
Query: 628 QIATYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSK 449
Q TYLGRPWK+Y+R V M+S IGDL+RPEGW W GD L TLYY EY+NTGPGAG +
Sbjct: 337 QTQTYLGRPWKQYSRVVFMQSYIGDLVRPEGWLAWDGDFALDTLYYGEYSNTGPGAGVAA 158
Query: 448 RVNWPGYHVIGQA 410
RV WPG+HV+ A
Sbjct: 157 RVKWPGFHVMTSA 119
Score = 67.5 bits (141), Expect(3) = 5e-021
Identities = 32/74 (43%), Positives = 39/74 (52%)
Frame = +3 / +3
Query: 405 ASACPMTW*PGQXXXXXXXXXXXXXXYSA**SVLRPRSPIHSAHPSGLMRSPMVLSITTV 584
++A MTW PG YS **SV +SP H++HPSG RSPM + T
Sbjct: 114 SAALVMTWNPGHLTLAATPAPGPVLLYSP**SVSSAKSPSHASHPSGRTRSPM*DCMNTT 293
Query: 585 LAYSFHGRPR*VAI 626
Y FHGRPR V +
Sbjct: 294 REYCFHGRPRYVCV 335
Score = 63.4 bits (132), Expect(3) = 2e-046
Identities = 25/46 (54%), Positives = 30/46 (65%)
Frame = -2 / -1
Query: 799 GNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRI 662
GN+AA+FQNC + R+P Q N VTAQGR D NM TG Q C +
Sbjct: 538 GNAAAVFQNCSLLPRRPLPDQKNSVTAQGRLDANMTTGFAFQFCNV 401
Score = 50.6 bits (104), Expect(3) = 5e-021
Identities = 22/43 (51%), Positives = 23/43 (53%)
Frame = +3 / +3
Query: 669 QPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAEL 797
Q W PV ML S PCAVT W G R QFWN+AA L
Sbjct: 408 QNWKANPVVMLASSLPCAVTEFFWSGSGRRGRREQFWNTAAAL 536
Score = 29.5 bits (58), Expect(3) = 2e-046
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3 / -2
Query: 411 PTPRHSPPAPSSTARHGCRAPARPT 337
P P SP SS A GCR PA T
Sbjct: 117 PRPATSPSRSSSRATCGCRPPASST 43
Score = 22.1 bits (42), Expect(3) = 5e-021
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3 / +3
Query: 324 VNPMTLGVPVLCSHDAPSMKAPAVNAVASA 413
V P PV +H PSM V ASA
Sbjct: 30 VRPAVYLTPVGGNHMLPSMNCATVKLPASA 119
>gb|CW241950.1|CW241950 104_701_11219058_116_37554_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11219058, DNA
sequence
Length = 636
Score = 94.5 bits (200), Expect(4) = 3e-046
Identities = 37/72 (51%), Positives = 44/72 (61%)
Frame = -2 / -3
Query: 883 GYQDTLYVHANRQFFRDCEVLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTD 704
G+QDTLY H+ RQ +RDC V GTVDF+FGN + Q L+ Q+ VTAQGR D
Sbjct: 634 GHQDTLYAHSLRQLYRDCRVAGTVDFVFGNGIVVVQRSLVATLPLAPGQTGSVTAQGRKD 455
Query: 703 PNMPTGIVLQGC 668
PN TG GC
Sbjct: 454 PNQNTGFSFHGC 419
Score = 85.4 bits (180), Expect(3) = 4e-022
Identities = 37/72 (51%), Positives = 41/72 (56%)
Frame = +3 / +3
Query: 669 QPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQSRKNC 848
QPW PV LGS RPCAVT+ W R + LPK KSTVP+T QSR +C
Sbjct: 420 QPWKEKPVFWLGSFRPCAVTLPVWPGASGSVATRLRCTTTMPLPKTKSTVPATRQSR*SC 599
Query: 849 RLACTYSVSWYP 884
R C YSVSW P
Sbjct: 600 RSECAYSVSWCP 635
Score = 61.6 bits (128), Expect(4) = 3e-046
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -2 / -3
Query: 511 GLKTLYYAEYANTGPGAGTSKRVNWPGYHVIGQA 410
GL TL+Y EY N GPGAG + RV WPGYHVI A
Sbjct: 271 GLATLFYGEYKNYGPGAGVAGRVKWPGYHVIMDA 170
Score = 56.5 bits (117), Expect(4) = 3e-046
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -2 / -3
Query: 619 TYLGRPWKEYARTVVMESTIGDLIRPEGWAEW 524
TYLGRPWK ++R VVMES +G I+ GW EW
Sbjct: 397 TYLGRPWKPFSRVVVMESYLGPGIQARGWLEW 302
Score = 35.0 bits (70), Expect(3) = 4e-022
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3 / +3
Query: 525 HSAHPSGLMRSPMVLSITTVLAYSFHGRPR 614
HS+HP + P SITT FHGRPR
Sbjct: 303 HSSHPRA*IPGPR*DSITTTREKGFHGRPR 392
Score = 31.3 bits (62), Expect(4) = 3e-046
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2 / -3
Query: 424 VIGQADATAFTAGAFIDGASWLQSTG 347
++ A A+ FT FIDG +WL TG
Sbjct: 181 IMDAAVASRFTVRRFIDGLAWLPGTG 104
Score = 27.6 bits (54), Expect(3) = 4e-022
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3 / +3
Query: 345 VPVLCSHDAPSMKAPAVNAVASACPM 422
+PV SH +PSM VN +A+A M
Sbjct: 102 IPVPGSHASPSMNRLTVNRLATAASM 179
>gb|CL182214.1|CL182214 104_393_10897273_116_31922_265 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10897273, DNA
sequence
Length = 729
Score = 186 bits (401), Expect = 5e-046
Identities = 74/142 (52%), Positives = 95/142 (66%)
Frame = -2 / -2
Query: 1081 TQTVVTGDKSNXXXXXXXXXXXXXAEGNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSVF 902
T+TV+TGDKS A GNGF+ + +G NTAG + HQAVA+ VQ D S F
Sbjct: 446 TKTVITGDKSFMMNITTKDTATMEALGNGFLMRGIGVENTAGAKNHQAVALRVQSDMSAF 267
Query: 901 YNCRFEGYQDTLYVHANRQFFRDCEVLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVT 722
Y CRF+GYQDTLY H +RQ++R+C + GT+DFIFGN+ +FQNCL+ VRK D+Q N+VT
Sbjct: 266 YECRFDGYQDTLYTHTSRQYYRECVITGTIDFIFGNAQVVFQNCLIQVRKCMDNQQNIVT 87
Query: 721 AQGRTDPNMPTGIVLQGCRIVP 656
AQGR + G V+ C I P
Sbjct: 86 AQGRKERRSAGGTVIHNCTIEP 21
Score = 158 bits (339), Expect = 2e-037
Identities = 69/114 (60%), Positives = 76/114 (66%)
Frame = +3 / +1
Query: 657 GTMRQPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQS 836
G+M Q W T+P L S+RPCAVTM WLS LRT MRQFWN+ LPKMKS VP + S
Sbjct: 22 GSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMKSMVPVMTHS 201
Query: 837 RKNCRLACTYSVSWYPSNRQL*NTDLSPCTCIATAWCPSGPAVFTNPIDLQMNP 998
R CRL C YSVSWYPSNR *N D+S CT ATAW PAVF+ PI NP
Sbjct: 202 R*YCRLVCVYSVSWYPSNRHS*NADMSLCTRSATAWWFLAPAVFSTPIPRIRNP 363
>gb|CW192233.1|CW192233 104_614_11178915_116_36943_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11178915, DNA
sequence
Length = 655
Score = 186 bits (401), Expect = 5e-046
Identities = 74/142 (52%), Positives = 95/142 (66%)
Frame = -2 / +1
Query: 1081 TQTVVTGDKSNXXXXXXXXXXXXXAEGNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSVF 902
T+TV+TGDKS A GNGF+ + +G NTAG + HQAVA+ VQ D S F
Sbjct: 214 TKTVITGDKSFMMNITTKDTATMEALGNGFLMRGIGVENTAGAKNHQAVALRVQSDMSAF 393
Query: 901 YNCRFEGYQDTLYVHANRQFFRDCEVLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVT 722
Y CRF+GYQDTLY H +RQ++R+C + GT+DFIFGN+ +FQNCL+ VRK D+Q N+VT
Sbjct: 394 YECRFDGYQDTLYTHTSRQYYRECVITGTIDFIFGNAQVVFQNCLIQVRKCMDNQQNIVT 573
Query: 721 AQGRTDPNMPTGIVLQGCRIVP 656
AQGR + G V+ C I P
Sbjct: 574 AQGRKERRSAGGTVIHNCTIEP 639
Score = 158 bits (339), Expect = 2e-037
Identities = 69/114 (60%), Positives = 76/114 (66%)
Frame = +3 / -3
Query: 657 GTMRQPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQS 836
G+M Q W T+P L S+RPCAVTM WLS LRT MRQFWN+ LPKMKS VP + S
Sbjct: 638 GSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMKSMVPVMTHS 459
Query: 837 RKNCRLACTYSVSWYPSNRQL*NTDLSPCTCIATAWCPSGPAVFTNPIDLQMNP 998
R CRL C YSVSWYPSNR *N D+S CT ATAW PAVF+ PI NP
Sbjct: 458 R*YCRLVCVYSVSWYPSNRHS*NADMSLCTRSATAWWFLAPAVFSTPIPRIRNP 297
>gb|CW281478.1|CW281478 104_757_11408201_116_35463_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11408201, DNA
sequence
Length = 479
Score = 172 bits (371), Expect(2) = 6e-046
Identities = 65/116 (56%), Positives = 84/116 (72%)
Frame = -2 / +1
Query: 1003 GNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEV 824
GNGF+ + +G NTAG + HQAVA+ VQ D S FY CRF+GYQDTLY H +RQ++R+C +
Sbjct: 46 GNGFLMRGIGVENTAGAKNHQAVALRVQSDMSAFYECRFDGYQDTLYTHTSRQYYRECVI 225
Query: 823 LGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVP 656
GT+DFIFGN+ +FQNCL+ VRK D+Q N+VTAQGR + G V+ C I P
Sbjct: 226 TGTIDFIFGNAQVVFQNCLIQVRKCMDNQQNIVTAQGRKERRSAGGTVIHNCTIEP 393
Score = 158 bits (339), Expect(2) = 9e-040
Identities = 69/114 (60%), Positives = 76/114 (66%)
Frame = +3 / -1
Query: 657 GTMRQPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQS 836
G+M Q W T+P L S+RPCAVTM WLS LRT MRQFWN+ LPKMKS VP + S
Sbjct: 392 GSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMKSMVPVMTHS 213
Query: 837 RKNCRLACTYSVSWYPSNRQL*NTDLSPCTCIATAWCPSGPAVFTNPIDLQMNP 998
R CRL C YSVSWYPSNR *N D+S CT ATAW PAVF+ PI NP
Sbjct: 212 R*YCRLVCVYSVSWYPSNRHS*NADMSLCTRSATAWWFLAPAVFSTPIPRIRNP 51
Score = 33.6 bits (67), Expect(2) = 6e-046
Identities = 10/17 (58%), Positives = 16/17 (94%)
Frame = -2 / +1
Query: 628 QIATYLGRPWKEYARTV 578
++ T+LGRPWKE++RT+
Sbjct: 427 KLRTFLGRPWKEHSRTL 477
Score = 27.6 bits (54), Expect(2) = 9e-040
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / -3
Query: 581 RPRVLLPRPAEVGGDLEAVG 640
R RVLLPRP + G +L G
Sbjct: 474 RARVLLPRPPQEGPELAVAG 415
>gb|CD203710.1|CD203710 HS1_1_D09.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_1_D09_A012 3', mRNA sequence
Length = 654
Score = 166 bits (357), Expect(2) = 1e-045
Identities = 66/125 (52%), Positives = 79/125 (63%)
Frame = -2 / +2
Query: 784 LFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQALFPDRLQIATYLGR 605
+ Q C + RKP +QSN+ TAQGR DPN TGI + C++ L TYLGR
Sbjct: 2 VLQGCNLYARKPLPNQSNIFTAQGREDPNQNTGISIHRCKVAAAADLLQSSSSTKTYLGR 181
Query: 604 PWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVNWPGYH 425
PWK+Y+RTV ++S + LI P GW EW G+ L TLYY EY NTGPGAGTS RV W GY
Sbjct: 182 PWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRVKWKGYR 361
Query: 424 VIGQA 410
VI A
Sbjct: 362 VITSA 376
Score = 87.7 bits (185), Expect(2) = 4e-021
Identities = 44/97 (45%), Positives = 50/97 (51%)
Frame = +3 / -1
Query: 483 YSA**SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR*VAIWRRSGKSACSGT 662
YS **SV + P HS+ P+G M TV Y FHGRPR*V + + +
Sbjct: 303 YSP**SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VLVEEEDCSRSAAAA 124
Query: 663 MRQPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQ 773
Q W MPV LGS RPCAV ML WL GLR Q
Sbjct: 123 TLQRWMEMPVFWLGSSRPCAVKMLLWLGSGLRAYRLQ 13
Score = 39.1 bits (79), Expect(2) = 1e-045
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2 / +2
Query: 424 VIGQADATAFTAGAFIDGASWLQSTGTPNVMG 329
+ A+A+AFT G+FIDG WL T P G
Sbjct: 365 ITSAAEASAFTVGSFIDGDVWLAGTSIPFTTG 460
Score = 35.4 bits (71), Expect(2) = 4e-021
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / -1
Query: 330 PMTLGVPVLCSHDAPSMKAPAVNAVASA 413
P+ G+ V S +PSMK P VNA+ASA
Sbjct: 459 PVVKGMDVPASQTSPSMKEPTVNALASA 376
>gb|CN125758.1|CN125758 RHOH1_13_D02.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_13_D02_A002 3', mRNA sequence
Length = 689
Score = 166 bits (356), Expect(2) = 2e-045
Identities = 66/123 (53%), Positives = 78/123 (63%)
Frame = -2 / +3
Query: 778 QNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQALFPDRLQIATYLGRPW 599
Q C + RKP +QSN+ TAQGR DPN TGI + C++ L TYLGRPW
Sbjct: 6 QGCNLYARKPLPNQSNIFTAQGREDPNQNTGISIHRCKVAAAADLLQSSSSTKTYLGRPW 185
Query: 598 KEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVNWPGYHVI 419
K+Y+RTV ++S + LI P GW EW G+ L TLYY EY NTGPGAGTS RV W GY VI
Sbjct: 186 KQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVI 365
Query: 418 GQA 410
A
Sbjct: 366 TSA 374
Score = 87.7 bits (185), Expect(2) = 4e-021
Identities = 44/97 (45%), Positives = 50/97 (51%)
Frame = +3 / -2
Query: 483 YSA**SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR*VAIWRRSGKSACSGT 662
YS **SV + P HS+ P+G M TV Y FHGRPR*V + + +
Sbjct: 301 YSP**SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VLVEEEDCSRSAAAA 122
Query: 663 MRQPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQ 773
Q W MPV LGS RPCAV ML WL GLR Q
Sbjct: 121 TLQRWMEMPVFWLGSSRPCAVKMLLWLGSGLRAYRLQ 11
Score = 39.1 bits (79), Expect(2) = 2e-045
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2 / +3
Query: 424 VIGQADATAFTAGAFIDGASWLQSTGTPNVMG 329
+ A+A+AFT G+FIDG WL T P G
Sbjct: 363 ITSAAEASAFTVGSFIDGDVWLAGTSIPFTTG 458
Score = 35.4 bits (71), Expect(2) = 4e-021
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / -2
Query: 330 PMTLGVPVLCSHDAPSMKAPAVNAVASA 413
P+ G+ V S +PSMK P VNA+ASA
Sbjct: 457 PVVKGMDVPASQTSPSMKEPTVNALASA 374
>gb|CW339306.1|CW339306 104_840_11485203_148_36139_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485203, DNA
sequence
Length = 669
Score = 167 bits (360), Expect(2) = 4e-044
Identities = 63/114 (55%), Positives = 81/114 (71%)
Frame = -2 / +1
Query: 1003 GNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEV 824
GN F+ + + N+AGP HQAVA+ V D S FY C F GYQDTLYVH+ RQFFRDC++
Sbjct: 250 GNNFLARDLTIENSAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRDCDI 429
Query: 823 LGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRI 662
GT+DF+FGN+A + Q C + RKP +QSN+ TAQGR DPN TGI + C++
Sbjct: 430 YGTIDFVFGNAAVVLQGCNLYARKPLPNQSNIFTAQGREDPNQNTGISIHRCKV 591
Score = 130 bits (279), Expect(2) = 7e-032
Identities = 60/101 (59%), Positives = 64/101 (63%)
Frame = +3 / -2
Query: 669 QPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQSRKNC 848
Q W MPV LGS RPCAV ML WL GLR Q ++ A LPK KS VP SQSRKNC
Sbjct: 584 QRWMEMPVFWLGSSRPCAVKMLLWLGSGLRAYRLQPCSTTAALPKTKSMVP*MSQSRKNC 405
Query: 849 RLACTYSVSWYPSNRQL*NTDLSPCTCIATAWCPSGPAVFT 971
R CTYSVSW P+ Q *N D S T ATAWC GPA F+
Sbjct: 404 RRECTYSVSW*PTKLQR*NADRSAPTRSATAWCLDGPAEFS 282
Score = 32.7 bits (65), Expect(2) = 4e-044
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -2 / +3
Query: 619 TYLGRPWKEYAR 584
TYLGRPWK+Y+R
Sbjct: 633 TYLGRPWKQYSR 668
Score = 28.6 bits (56), Expect(2) = 7e-032
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3 / -3
Query: 591 YSFHGRPR*VAIWRRS 638
Y FHGRPR*V + RR+
Sbjct: 661 YCFHGRPR*VWVRRRT 614
>gb|CX609223.1|CX609223 ANR1_11_H09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_H09_A002 3', mRNA sequence
Length = 647
Score = 160 bits (345), Expect(2) = 5e-044
Identities = 64/116 (55%), Positives = 75/116 (64%)
Frame = -2 / +2
Query: 757 RKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQALFPDRLQIATYLGRPWKEYARTV 578
RKP +QSN+ TAQGR DPN TGI + C++ L TYLGRPWK+Y+RTV
Sbjct: 14 RKPLPNQSNIFTAQGREDPNQNTGISIHRCKVAAAADLLQSSSSTKTYLGRPWKQYSRTV 193
Query: 577 VMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVNWPGYHVIGQA 410
++S + LI P GW EW G+ L TLYY EY NTGPGAGTS RV W GY VI A
Sbjct: 194 FLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSA 361
Score = 87.2 bits (184), Expect(2) = 6e-021
Identities = 43/92 (46%), Positives = 49/92 (53%)
Frame = +3 / -3
Query: 483 YSA**SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR*VAIWRRSGKSACSGT 662
YS **SV + P HS+ P+G M TV Y FHGRPR*V + + +
Sbjct: 288 YSP**SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VLVEEEDCSRSAAAA 109
Query: 663 MRQPWSTMPVGMLGSVRPCAVTMLDWLSPGLR 758
Q W MPV LGS RPCAV ML WL GLR
Sbjct: 108 TLQRWMEMPVFWLGSSRPCAVKMLLWLGSGLR 13
Score = 39.1 bits (79), Expect(2) = 5e-044
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2 / +2
Query: 424 VIGQADATAFTAGAFIDGASWLQSTGTPNVMG 329
+ A+A+AFT G+FIDG WL T P G
Sbjct: 350 ITSAAEASAFTVGSFIDGDVWLAGTSIPFTTG 445
Score = 35.4 bits (71), Expect(2) = 6e-021
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / -3
Query: 330 PMTLGVPVLCSHDAPSMKAPAVNAVASA 413
P+ G+ V S +PSMK P VNA+ASA
Sbjct: 444 PVVKGMDVPASQTSPSMKEPTVNALASA 361
>gb|CD233006.1|CD233006 SS1_11_H04.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_11_H04_A012 3', mRNA sequence
Length = 635
Score = 160 bits (345), Expect(2) = 5e-044
Identities = 64/116 (55%), Positives = 75/116 (64%)
Frame = -2 / +1
Query: 757 RKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQALFPDRLQIATYLGRPWKEYARTV 578
RKP +QSN+ TAQGR DPN TGI + C++ L TYLGRPWK+Y+RTV
Sbjct: 10 RKPLPNQSNIFTAQGREDPNQNTGISIHRCKVAAAADLLQSSSSTKTYLGRPWKQYSRTV 189
Query: 577 VMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVNWPGYHVIGQA 410
++S + LI P GW EW G+ L TLYY EY NTGPGAGTS RV W GY VI A
Sbjct: 190 FLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSA 357
Score = 87.2 bits (184), Expect(2) = 6e-021
Identities = 43/92 (46%), Positives = 49/92 (53%)
Frame = +3 / -1
Query: 483 YSA**SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR*VAIWRRSGKSACSGT 662
YS **SV + P HS+ P+G M TV Y FHGRPR*V + + +
Sbjct: 284 YSP**SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VLVEEEDCSRSAAAA 105
Query: 663 MRQPWSTMPVGMLGSVRPCAVTMLDWLSPGLR 758
Q W MPV LGS RPCAV ML WL GLR
Sbjct: 104 TLQRWMEMPVFWLGSSRPCAVKMLLWLGSGLR 9
Score = 39.1 bits (79), Expect(2) = 5e-044
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2 / +1
Query: 424 VIGQADATAFTAGAFIDGASWLQSTGTPNVMG 329
+ A+A+AFT G+FIDG WL T P G
Sbjct: 346 ITSAAEASAFTVGSFIDGDVWLAGTSIPFTTG 441
Score = 35.4 bits (71), Expect(2) = 6e-021
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / -1
Query: 330 PMTLGVPVLCSHDAPSMKAPAVNAVASA 413
P+ G+ V S +PSMK P VNA+ASA
Sbjct: 440 PVVKGMDVPASQTSPSMKEPTVNALASA 357
>gb|CW433383.1|CW433383 fsbb001f148j05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f148j05, DNA
sequence
Length = 689
Score = 142 bits (305), Expect(2) = 9e-044
Identities = 56/112 (50%), Positives = 69/112 (61%)
Frame = -2 / +1
Query: 1003 GNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEV 824
G GF+ + + F NTAGP HQAVA+ V D+S F+ EG+QDTLY H+ RQ +RDC V
Sbjct: 151 GAGFVARDLTFRNTAGPAAHQAVALRVDSDRSAFFRVAVEGHQDTLYAHSLRQLYRDCRV 330
Query: 823 LGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGC 668
GTVDF+FGN + Q L+ Q+ VTAQGR DPN TG GC
Sbjct: 331 AGTVDFVFGNGIVVVQRSLVATLPLAPGQTGSVTAQGRKDPNQNTGFSFHGC 486
Score = 116 bits (247), Expect(2) = 2e-029
Identities = 53/110 (48%), Positives = 59/110 (53%)
Frame = +3 / -1
Query: 669 QPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQSRKNC 848
QPW PV LGS RPCAVT+ W R + LPK KSTVP+T QSR +C
Sbjct: 485 QPWKEKPVFWLGSFRPCAVTLPVWPGASGSVATRLRCTTTMPLPKTKSTVPATRQSR*SC 306
Query: 849 RLACTYSVSWYPSNRQL*NTDLSPCTCIATAWCPSGPAVFTNPIDLQMNP 998
R C YSVSW PS + S T ATAWC +GPAVF N NP
Sbjct: 305 RSECAYSVSWCPSTATRKKAERSESTRSATAWCAAGPAVFLNVRSRATNP 156
Score = 56.5 bits (117), Expect(2) = 9e-044
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -2 / +1
Query: 619 TYLGRPWKEYARTVVMESTIGDLIRPEGWAEW 524
TYLGRPWK ++R VVMES +G I+ GW EW
Sbjct: 508 TYLGRPWKPFSRVVVMESYLGPGIQARGWLEW 603
Score = 35.0 bits (70), Expect(2) = 2e-029
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3 / -1
Query: 525 HSAHPSGLMRSPMVLSITTVLAYSFHGRPR 614
HS+HP + P SITT FHGRPR
Sbjct: 602 HSSHPRA*IPGPR*DSITTTREKGFHGRPR 513
>gb|AW287387.2|AW287387 LG1_303_C07.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 490
Score = 155 bits (333), Expect(2) = 2e-042
Identities = 61/111 (54%), Positives = 72/111 (64%)
Frame = -2 / +1
Query: 742 SQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQALFPDRLQIATYLGRPWKEYARTVVMEST 563
+QSN+ TAQGR DPN TGI + C++ L TYLGRPWK+Y+RTV ++S
Sbjct: 16 NQSNIFTAQGREDPNQNTGISIHRCKVAAAADLLQSSSSTKTYLGRPWKQYSRTVFLQSE 195
Query: 562 IGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVNWPGYHVIGQA 410
+ LI P GW EW G+ L TLYY EY NTGPGAGTS RV W GY VI A
Sbjct: 196 LDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSA 348
Score = 39.1 bits (79), Expect(2) = 2e-042
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2 / +1
Query: 424 VIGQADATAFTAGAFIDGASWLQSTGTPNVMG 329
+ A+A+AFT G+FIDG WL T P G
Sbjct: 337 ITSAAEASAFTVGSFIDGDVWLAGTSIPFTTG 432
>gb|CX608981.1|CX608981 ANR1_10_A01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_10_A01_A002 3', mRNA sequence
Length = 599
Score = 115 bits (245), Expect(3) = 7e-042
Identities = 43/67 (64%), Positives = 49/67 (73%)
Frame = -2 / +1
Query: 619 TYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVN 440
T+LGRPWK Y+RTVVM S + + GW EW GD LKTL+Y EY N GPGA T+ RVN
Sbjct: 178 TFLGRPWKAYSRTVVMLSYLDAHVDARGWLEWDGDFALKTLFYGEYQNEGPGAATAGRVN 357
Query: 439 WPGYHVI 419
WPGYHVI
Sbjct: 358 WPGYHVI 378
Score = 59.3 bits (123), Expect(3) = 7e-042
Identities = 25/52 (48%), Positives = 29/52 (55%)
Frame = -2 / +1
Query: 793 SAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQALFP 638
+AA+ Q C + R P Q N VT QGR DPN TG L CR+VP L P
Sbjct: 1 AAAVMQGCALAARLPLRGQQNAVTVQGREDPNQNTGTSLHRCRVVPAPDLAP 156
Score = 36.8 bits (74), Expect(3) = 7e-042
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / +1
Query: 406 ATAFTAGAFIDGASWLQSTGTPNVMG 329
A FT G FI G +WL TG P + G
Sbjct: 394 AVQFTVGQFIQGGNWLNGTGVPYIEG 471
>gb|CD228200.1|CD228200 CCC1_6_B10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_6_B10_A007 3', mRNA sequence
Length = 639
Score = 120 bits (256), Expect(3) = 3e-041
Identities = 45/70 (64%), Positives = 51/70 (72%)
Frame = -2 / +2
Query: 619 TYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVN 440
TYLGRPWK+Y+RTV ++S + LI P GW EW G+ L TLYY EY NTGPGAGTS RV
Sbjct: 152 TYLGRPWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRVR 331
Query: 439 WPGYHVIGQA 410
W GY VI A
Sbjct: 332 WKGYRVITSA 361
Score = 49.6 bits (102), Expect(3) = 3e-041
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = -2 / +2
Query: 772 CLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRI 662
C + RKP +QSN+ TAQGR DPN TGI + C++
Sbjct: 2 CNLYARKPLPNQSNIFTAQGREDPNQNTGISIHRCKV 112
Score = 39.1 bits (79), Expect(3) = 3e-041
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2 / +2
Query: 424 VIGQADATAFTAGAFIDGASWLQSTGTPNVMG 329
+ A+A+AFT G+FIDG WL T P G
Sbjct: 350 ITSAAEASAFTVGSFIDGDVWLAGTSIPFTTG 445
>gb|CW443774.1|CW443774 fsbb001f164a20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f164a20, DNA
sequence
Length = 456
Score = 166 bits (358), Expect = 4e-040
Identities = 65/120 (54%), Positives = 84/120 (70%)
Frame = -2 / +2
Query: 1081 TQTVVTGDKSNXXXXXXXXXXXXXAEGNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSVF 902
T+TV+TGDKS A GNGF+ + +G NTAG + HQAVA+ VQ D S F
Sbjct: 95 TKTVITGDKSFMMNITTKDTATMEALGNGFLMRGIGVENTAGAKNHQAVALRVQSDMSAF 274
Query: 901 YNCRFEGYQDTLYVHANRQFFRDCEVLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVT 722
Y CRF+GYQDTLY H +RQ++R+C + GT+DFIFGN+ +FQNCL+ VRK D+Q N+VT
Sbjct: 275 YECRFDGYQDTLYTHTSRQYYRECVITGTIDFIFGNAQVVFQNCLIQVRKCMDNQQNIVT 454
Score = 133 bits (284), Expect = 6e-030
Identities = 58/93 (62%), Positives = 62/93 (66%)
Frame = +3 / -1
Query: 720 AVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQSRKNCRLACTYSVSWYPSNRQL 899
AVTM WLS LRT MRQFWN+ LPKMKS VP + SR CRL C YSVSWYPSNR
Sbjct: 456 AVTMFCWLSMHLRTWMRQFWNTTCALPKMKSMVPVMTHSR*YCRLVCVYSVSWYPSNRHS 277
Query: 900 *NTDLSPCTCIATAWCPSGPAVFTNPIDLQMNP 998
*N D+S CT ATAW PAVF+ PI NP
Sbjct: 276 *NADMSLCTRSATAWWFLAPAVFSTPIPRIRNP 178
>gb|BF421213.1|BF421213 FM1_6_H03.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 349
Score = 164 bits (352), Expect = 3e-039
Identities = 63/110 (57%), Positives = 78/110 (70%)
Frame = -2 / +3
Query: 967 NTAGPEGHQAVAMHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEVLGTVDFIFGNSA 788
N AGP HQAVA+ V D + FY C F GYQDTLY H+ RQF+RDC+V GTVDF+FG++A
Sbjct: 15 NAAGPSKHQAVALRVNADLAAFYRCSFAGYQDTLYAHSLRQFYRDCDVYGTVDFVFGDAA 194
Query: 787 ALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQALFP 638
A+ Q C + R+PG Q N+VTAQGR DPN TGIV+QG ++ L P
Sbjct: 195 AVLQGCSLYARRPGPGQKNVVTAQGREDPNQNTGIVVQGGKVAAAADLVP 344
Score = 102 bits (218), Expect = 8e-021
Identities = 54/113 (47%), Positives = 62/113 (54%)
Frame = +3 / -1
Query: 633 RSGKSACSGTMRQPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKS 812
R+G + + P +TMPV LGS RPCAVT PG R Q ++AA PK KS
Sbjct: 349 RTGTRSAAAATLPPCTTMPVFWLGSSRPCAVTTFFCPGPGRRA*RLQPCSTAAASPKTKS 170
Query: 813 TVPSTSQSRKNCRLACTYSVSWYPSNRQL*NTDLSPCTCIATAWCPSGPAVFT 971
TVP TSQSR N R C VSW P+ Q * S T ATAWC GPA F+
Sbjct: 169 TVP*TSQSR*NWRRECA*RVSW*PAKLQR*KAARSAFTRSATAWCLLGPAAFS 11
>gb|CW328078.1|CW328078 104_824_11479103_148_35988_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479103, DNA
sequence
Length = 666
Score = 105 bits (223), Expect(3) = 5e-039
Identities = 38/66 (57%), Positives = 48/66 (72%)
Frame = -2 / +1
Query: 628 QIATYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSK 449
++ T+LGRPWKE++RT+ ++S IG I P+GW W+GD GL T YYAE N G GA TSK
Sbjct: 193 KLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSK 372
Query: 448 RVNWPG 431
RV W G
Sbjct: 373 RVKWRG 390
Score = 78.0 bits (164), Expect(2) = 1e-023
Identities = 33/52 (63%), Positives = 37/52 (71%)
Frame = +3 / -2
Query: 657 GTMRQPWSTMPVGMLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKS 812
G+M Q W T+P L S+RPCAVTM WLS LRT MRQFWN+ LPKMKS
Sbjct: 158 GSMVQLWMTVPPADLLSLRPCAVTMFCWLSMHLRTWMRQFWNTTCALPKMKS 3
Score = 70.3 bits (147), Expect(3) = 5e-039
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = -2 / +1
Query: 814 VDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRIVP 656
+DFIFGN+ +FQNCL+ VRK D+Q N+VTAQGR + G V+ C I P
Sbjct: 1 IDFIFGNAQVVFQNCLIQVRKCMDNQQNIVTAQGRKERRSAGGTVIHNCTIEP 159
Score = 53.3 bits (110), Expect(2) = 1e-023
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +3 / -2
Query: 486 SA**SVLRPRSPIHSAHPSGLMRSPMVLSITTVLAYSFHGRPR 614
SA** VLRP+SP H +HP G M+ P+ + +V SFHGRPR
Sbjct: 335 SA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPR 207
Score = 26.3 bits (51), Expect(3) = 5e-039
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -2 / +1
Query: 397 FTAGAFIDGASWLQSTGTPNVMG 329
+T +FI G WL G P + G
Sbjct: 427 YTVESFIQGQHWLPQLGVPFIPG 495
>gb|CL150595.1|CL150595 104_332_10778646_114_31357_198 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10778646, DNA
sequence
Length = 794
Score = 162 bits (349), Expect = 7e-039
Identities = 63/118 (53%), Positives = 82/118 (69%)
Frame = -2 / -1
Query: 1081 TQTVVTGDKSNXXXXXXXXXXXXXAEGNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSVF 902
T+TV+TGDKS A GNGF+ + +G NTAG + HQAVA+ VQ D S F
Sbjct: 356 TKTVITGDKSFMMNITTKDTATMEALGNGFLMRGIGVENTAGAKNHQAVALRVQSDMSAF 177
Query: 901 YNCRFEGYQDTLYVHANRQFFRDCEVLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNM 728
Y CRF+GYQDTLY H +RQ++R+C + GT+DFIFGN+ +FQNCL+ VRK D+Q N+
Sbjct: 176 YECRFDGYQDTLYTHTSRQYYRECVITGTIDFIFGNAQVVFQNCLIQVRKCMDNQQNI 3
Score = 127 bits (271), Expect = 4e-028
Identities = 55/90 (61%), Positives = 59/90 (65%)
Frame = +3 / +1
Query: 729 MLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQSRKNCRLACTYSVSWYPSNRQL*NT 908
M WLS LRT MRQFWN+ LPKMKS VP + SR CRL C YSVSWYPSNR *N
Sbjct: 4 MFCWLSMHLRTWMRQFWNTTCALPKMKSMVPVMTHSR*YCRLVCVYSVSWYPSNRHS*NA 183
Query: 909 DLSPCTCIATAWCPSGPAVFTNPIDLQMNP 998
D+S CT ATAW PAVF+ PI NP
Sbjct: 184 DMSLCTRSATAWWFLAPAVFSTPIPRIRNP 273
>gb|CW280822.1|CW280822 104_756_11407836_116_35450_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11407836, DNA
sequence
Length = 648
Score = 95.9 bits (203), Expect(2) = 2e-038
Identities = 35/72 (48%), Positives = 43/72 (59%)
Frame = -2 / -3
Query: 640 PDRLQIATYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGA 461
PD + YLGRPW+ YAR VM +++ + P GW +W G TLYY EY NTG GA
Sbjct: 451 PDLGETPVYLGRPWRRYARVAVMATSLDGSVAPAGWLQWSGQPAPGTLYYGEYRNTGAGA 272
Query: 460 GTSKRVNWPGYH 425
T+ RV W G H
Sbjct: 271 ATAGRVTWTGVH 236
Score = 85.4 bits (180), Expect(2) = 2e-038
Identities = 33/62 (53%), Positives = 43/62 (69%)
Frame = -2 / -3
Query: 847 QFFRDCEVLGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGC 668
QF+ D +V GTVDFIFGN+AA+ Q C + R+P Q ++VTAQGR DPN TG + C
Sbjct: 646 QFYGDTDVSGTVDFIFGNAAAVLQRCGIQARRPRPGQQDVVTAQGRADPNQNTGFSIHRC 467
Query: 667 RI 662
R+
Sbjct: 466 RV 461
>gb|CW321706.1|CW321706 104_815_11475696_148_35943_094 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11475696, DNA
sequence
Length = 670
Score = 155 bits (334), Expect = 8e-037
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = -2 / +1
Query: 577 VMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVNWPGYHVIGQADATA 398
+MESTI D I+PEG+ W GD G+KTL+YAEY N GPGAGTSKRVNWPG+HVI + DA
Sbjct: 1 IMESTIADFIKPEGYMPWNGDFGIKTLFYAEYNNRGPGAGTSKRVNWPGFHVITRKDAEQ 180
Query: 397 FTAGAFIDGASWLQSTGTPNVMGF 326
FTAG FIDGA WL+ TGTP+++GF
Sbjct: 181 FTAGPFIDGALWLKFTGTPHILGF 252
>gb|CN138851.1|CN138851 OX1_14_H09.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_14_H09_A002 3', mRNA sequence
Length = 491
Score = 122 bits (260), Expect(3) = 1e-036
Identities = 44/68 (64%), Positives = 53/68 (77%)
Frame = -2 / +1
Query: 619 TYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVN 440
+YLGRPWK ++RTVVMES +G L+ P GW W GD L TL YAEY N+GPGA TS+RV
Sbjct: 142 SYLGRPWKNFSRTVVMESYVGGLVDPSGWMPWSGDFALDTL*YAEYNNSGPGADTSRRVA 321
Query: 439 WPGYHVIG 416
WPG+HV+G
Sbjct: 322 WPGFHVLG 345
Score = 43.2 bits (88), Expect(3) = 1e-036
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = -2 / +1
Query: 757 RKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRIV 659
R P Q N VTAQGR+DPN TG +QG +V
Sbjct: 1 RLPMQGQCNTVTAQGRSDPNQNTGTSIQGSSLV 99
Score = 28.1 bits (55), Expect(3) = 1e-036
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2 / +1
Query: 409 DATAFTAGAFIDGASWLQSTGTPNVMG 329
DA FT + + G +WL TG P G
Sbjct: 355 DAGNFTVTSMVLGENWLPQTGVPFTSG 435
>gb|CW152394.1|CW152394 104_553_11144468_116_36324_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11144468, DNA
sequence
Length = 401
Score = 150 bits (323), Expect(2) = 2e-036
Identities = 60/111 (54%), Positives = 73/111 (65%)
Frame = -2 / -3
Query: 991 ICKSMGFVNTAGPEGHQAVAMHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEVLGTV 812
+ +M F NTAGP HQAVA D S +Y C FE YQDTLY H+ RQF+R C+V GTV
Sbjct: 399 VAMNMTFRNTAGPAKHQAVAFRSGADLSAYYGCSFEAYQDTLYTHSLRQFYRGCDVYGTV 220
Query: 811 DFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRIV 659
D++FGN+A +FQ C R P Q N VTAQGR+DPN TG +QG +V
Sbjct: 219 DYVFGNAAVVFQGCTFYSRLPMQGQCNTVTAQGRSDPNQNTGTSIQGSSLV 67
Score = 83.5 bits (176), Expect(3) = 2e-023
Identities = 39/68 (57%), Positives = 41/68 (60%)
Frame = +3 / +2
Query: 771 QFWNSAAELPKMKSTVPSTSQSRKNCRLACTYSVSWYPSNRQL*NTDLSPCTCIATAWCP 950
Q W + A LP STVP TSQ R NCR C YSVSWY S Q * D S ATAWC
Sbjct: 179 QPWKTTAALPNT*STVP*TSQPR*NCRRECVYSVSWYASKLQP*YADRSAPERNATAWCF 358
Query: 951 SGPAVFTN 974
+GPAVF N
Sbjct: 359 AGPAVFRN 382
Score = 42.8 bits (87), Expect(3) = 2e-023
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3 / +2
Query: 645 SACSGTMRQPWSTMPVGMLGSVRPCAVTML 734
S+ + T +PW +PV LGS+RPCAVT+L
Sbjct: 53 SSGAATREEPWMEVPVFWLGSLRPCAVTVL 142
Score = 24.0 bits (46), Expect(2) = 2e-036
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / -3
Query: 619 TYLGRPWK 596
+YLGRPWK
Sbjct: 24 SYLGRPWK 1
Score = 22.6 bits (43), Expect(3) = 2e-023
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = +3 / +2
Query: 597 FHGRPR*VAI 626
FHGRPR*+++
Sbjct: 2 FHGRPR*LSV 31
>gb|CW152395.1|CW152395 104_553_11144468_148_36328_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11144468, DNA
sequence
Length = 401
Score = 150 bits (323), Expect(2) = 2e-036
Identities = 60/111 (54%), Positives = 73/111 (65%)
Frame = -2 / +1
Query: 991 ICKSMGFVNTAGPEGHQAVAMHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEVLGTV 812
+ +M F NTAGP HQAVA D S +Y C FE YQDTLY H+ RQF+R C+V GTV
Sbjct: 1 VAMNMTFRNTAGPAKHQAVAFRSGADLSAYYGCSFEAYQDTLYTHSLRQFYRGCDVYGTV 180
Query: 811 DFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQGCRIV 659
D++FGN+A +FQ C R P Q N VTAQGR+DPN TG +QG +V
Sbjct: 181 DYVFGNAAVVFQGCTFYSRLPMQGQCNTVTAQGRSDPNQNTGTSIQGSSLV 333
Score = 83.5 bits (176), Expect(3) = 2e-023
Identities = 39/68 (57%), Positives = 41/68 (60%)
Frame = +3 / -1
Query: 771 QFWNSAAELPKMKSTVPSTSQSRKNCRLACTYSVSWYPSNRQL*NTDLSPCTCIATAWCP 950
Q W + A LP STVP TSQ R NCR C YSVSWY S Q * D S ATAWC
Sbjct: 221 QPWKTTAALPNT*STVP*TSQPR*NCRRECVYSVSWYASKLQP*YADRSAPERNATAWCF 42
Query: 951 SGPAVFTN 974
+GPAVF N
Sbjct: 41 AGPAVFRN 18
Score = 42.8 bits (87), Expect(3) = 2e-023
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3 / -1
Query: 645 SACSGTMRQPWSTMPVGMLGSVRPCAVTML 734
S+ + T +PW +PV LGS+RPCAVT+L
Sbjct: 347 SSGAATREEPWMEVPVFWLGSLRPCAVTVL 258
Score = 24.0 bits (46), Expect(2) = 2e-036
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / +1
Query: 619 TYLGRPWK 596
+YLGRPWK
Sbjct: 376 SYLGRPWK 399
Score = 22.6 bits (43), Expect(3) = 2e-023
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = +3 / -1
Query: 597 FHGRPR*VAI 626
FHGRPR*+++
Sbjct: 398 FHGRPR*LSV 369
>gb|CW177247.1|CW177247 104_590_11158924_116_36597_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11158924, DNA
sequence
Length = 696
Score = 92.3 bits (195), Expect(4) = 2e-036
Identities = 37/86 (43%), Positives = 53/86 (61%)
Frame = -2 / +3
Query: 1003 GNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEV 824
G F+ + + NTAGP+G QAVA+ Q + S+ Y C EGYQDTL+ + Q + + ++
Sbjct: 87 GMAFMAQDLTIRNTAGPKGLQAVALMSQSNFSLIYRCSIEGYQDTLFANKGDQIYLETDI 266
Query: 823 LGTVDFIFGNSAALFQNCLMTVRKPG 746
GTVDF+FG + A F C + VR G
Sbjct: 267 HGTVDFVFGYAKASFLGCRLLVRSSG 344
Score = 50.6 bits (104), Expect(4) = 2e-036
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -2 / +3
Query: 637 DRLQIATYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMG 518
D + T+LGRPWK ++ + MES + ++ GW EW G
Sbjct: 453 DLTGVKTFLGRPWKNHSHVIFMESFLDSIVNFTGWVEWEG 572
Score = 36.8 bits (74), Expect(4) = 2e-036
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2 / +3
Query: 505 KTLYYAEYANTGPGAGTSKRVNWPGYHVI 419
+T+ Y EY N GPGA TS+R+N ++
Sbjct: 588 ETVLYLEYDNYGPGADTSRRINITAVRIV 674
Score = 30.9 bits (61), Expect(4) = 2e-036
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2 / +3
Query: 748 GDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQ 650
G S+ N++TAQGR++ +G Q C + ++
Sbjct: 348 GASKPNVITAQGRSNSTDRSGFSFQNCSVKADE 446
>gb|CW263791.1|CW263791 104_732_11230914_148_35236_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11230914, DNA
sequence
Length = 672
Score = 92.3 bits (195), Expect(4) = 2e-036
Identities = 37/86 (43%), Positives = 53/86 (61%)
Frame = -2 / +3
Query: 1003 GNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEV 824
G F+ + + NTAGP+G QAVA+ Q + S+ Y C EGYQDTL+ + Q + + ++
Sbjct: 18 GMAFMAQDLTIRNTAGPKGLQAVALMSQSNFSLIYRCSIEGYQDTLFANKGDQIYLETDI 197
Query: 823 LGTVDFIFGNSAALFQNCLMTVRKPG 746
GTVDF+FG + A F C + VR G
Sbjct: 198 HGTVDFVFGYAKASFLGCRLLVRSSG 275
Score = 50.6 bits (104), Expect(4) = 2e-036
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -2 / +3
Query: 637 DRLQIATYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMG 518
D + T+LGRPWK ++ + MES + ++ GW EW G
Sbjct: 384 DLTGVKTFLGRPWKNHSHVIFMESFLDSIVNFTGWVEWEG 503
Score = 36.8 bits (74), Expect(4) = 2e-036
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2 / +3
Query: 505 KTLYYAEYANTGPGAGTSKRVNWPGYHVI 419
+T+ Y EY N GPGA TS+R+N ++
Sbjct: 519 ETVLYLEYDNYGPGADTSRRINITAVRIV 605
Score = 30.9 bits (61), Expect(4) = 2e-036
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2 / +3
Query: 748 GDSQSNMVTAQGRTDPNMPTGIVLQGCRIVPEQ 650
G S+ N++TAQGR++ +G Q C + ++
Sbjct: 279 GASKPNVITAQGRSNSTDRSGFSFQNCSVKADE 377
>gb|CW172298.1|CW172298 104_583_11156215_116_36533_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156215, DNA
sequence
Length = 613
Score = 151 bits (324), Expect = 2e-035
Identities = 60/111 (54%), Positives = 71/111 (63%)
Frame = -2 / +3
Query: 1003 GNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEV 824
G GF+ +M F NTAGP HQAVA D S +Y C FE YQDTLY H+ RQF+R C V
Sbjct: 279 GQGFVAMNMTFRNTAGPAKHQAVAFRSGADLSAYYGCSFEAYQDTLYTHSLRQFYRGCNV 458
Query: 823 LGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDPNMPTGIVLQG 671
TVD++ GN+A +FQ C R P Q N VTAQGR+DPN TG +QG
Sbjct: 459 YSTVDYVIGNAAVIFQGCTFYSRLPMQGQCNTVTAQGRSDPNQNTGTSIQG 611
>gb|CW137808.1|CW137808 104_525_11119866_116_34879_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11119866, DNA
sequence
Length = 699
Score = 96.4 bits (204), Expect(4) = 3e-035
Identities = 39/89 (43%), Positives = 54/89 (60%)
Frame = -2 / -2
Query: 1003 GNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEV 824
G GF+ + + NTAGPEG QAVA+ + S+ Y C EGYQDTL Q + + ++
Sbjct: 560 GMGFMAQDLTIQNTAGPEGLQAVALMSRSHFSLVYRCSIEGYQDTLNADTGDQIYLETDI 381
Query: 823 LGTVDFIFGNSAALFQNCLMTVRKPGDSQ 737
GT+DF+FG + A FQ C + VR G S+
Sbjct: 380 RGTIDFVFGYARAAFQGCRLLVRSSGASK 294
Score = 49.6 bits (102), Expect(4) = 3e-035
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = -2 / -2
Query: 625 IATYLGRPWKEYARTVVMESTIGDLIRPEGWAEW 524
+ T+LGRPWKE++ + ME+ + ++ GW EW
Sbjct: 179 VETFLGRPWKEHSHVIFMETFLSSIVNFTGWVEW 78
Score = 30.9 bits (61), Expect(4) = 3e-035
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2 / -2
Query: 733 NMVTAQGRTDPNMPTGIVLQGCRIVPEQ 650
N+VTAQGR++P +G Q C + ++
Sbjct: 281 NVVTAQGRSNPLDRSGFSFQNCSVTADE 198
Score = 29.5 bits (58), Expect(4) = 3e-035
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -2
Query: 502 TLYYAEYANTGPGAGT 455
T+ Y EYAN GPGA T
Sbjct: 50 TVVYLEYANYGPGADT 3
>gb|CW216947.1|CW216947 104_650_11195395_116_37129_080 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195395, DNA
sequence
Length = 716
Score = 150 bits (323), Expect = 3e-035
Identities = 57/101 (56%), Positives = 72/101 (71%)
Frame = -2 / +1
Query: 1003 GNGFICKSMGFVNTAGPEGHQAVAMHVQGDKSVFYNCRFEGYQDTLYVHANRQFFRDCEV 824
GN F+ + + N+AGP HQAVA+ V D S FY C F GYQDTLYVH+ RQFFRDC++
Sbjct: 355 GNNFLARDLTIENSAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRDCDI 534
Query: 823 LGTVDFIFGNSAALFQNCLMTVRKPGDSQSNMVTAQGRTDP 701
GT+DF+FGN+A + Q C + RKP +QSN+ TA GR DP
Sbjct: 535 YGTIDFVFGNAAVVLQGCNLYARKPLPNQSNIFTAXGREDP 657
Score = 119 bits (254), Expect = 9e-026
Identities = 54/92 (58%), Positives = 60/92 (65%)
Frame = +3 / -1
Query: 696 MLGSVRPCAVTMLDWLSPGLRTVMRQFWNSAAELPKMKSTVPSTSQSRKNCRLACTYSVS 875
++GS RPCAV ML WL GLR Q ++ A LPK KS VP SQSRKNCR CTYSVS
Sbjct: 662 LVGSSRPCAVKMLLWLGSGLRAYRLQPCSTTAALPKTKSMVP*MSQSRKNCRRECTYSVS 483
Query: 876 WYPSNRQL*NTDLSPCTCIATAWCPSGPAVFT 971
W P+ Q *N D S T ATAWC GPA F+
Sbjct: 482 W*PTKLQR*NADRSAPTRSATAWCLDGPAEFS 387
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,143,901,878
Number of Sequences: 832831
Number of extensions: 17930558
Number of successful extensions: 210060
Number of sequences better than 1.0e-020: 123
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 36102140406
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)