TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3858636.2.1
(907 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW677701.1|AW677701 WS1_10_H08.g1_A002 Water-stressed 1 ... 390 e-107
gb|BG047581.1|BG047581 OV1_25_F09.b1_A002 Ovary 1 (OV1) Sor... 389 e-107
gb|BG948544.1|BG948544 IP1_10_H11.b1_A002 Immature pannicle... 388 e-107
gb|BG102506.1|BG102506 RHIZ2_33_H09.g1_A003 Rhizome2 (RHIZ2... 354 e-102
gb|CW234030.1|CW234030 104_687_11213762_148_37379_005 Sorgh... 321 3e-089
gb|CW314845.1|CW314845 104_805_11472043_148_35821_070 Sorgh... 306 1e-084
gb|BG047939.1|BG047939 OV1_25_F09.g1_A002 Ovary 1 (OV1) Sor... 269 1e-079
gb|CW150733.1|CW150733 104_551_11143570_116_36314_043 Sorgh... 281 2e-077
gb|BG932956.1|BG932956 DG1_69_D11.g1_A002 Dark Grown 1 (DG1... 259 1e-076
gb|BE366341.1|BE366341 PI1_32_D08.g1_A002 Pathogen induced ... 252 2e-074
gb|CN129330.1|CN129330 RHOH1_34_G08.g1_A002 Acid- and alkal... 195 1e-073
gb|CL164480.1|CL164480 104_358_10807939_114_31814_307 Sorgh... 274 4e-073
gb|BE358396.1|BE358396 DG1_29_B04.g1_A002 Dark Grown 1 (DG1... 274 4e-073
gb|DN551872.1|DN551872 pSPR-RT-MR-H1_G04_C276 pSPR Sorghum ... 272 2e-072
gb|CW091315.1|CW091315 104_453_10998477_114_33030_093 Sorgh... 271 1e-071
gb|CN126243.1|CN126243 RHOH1_16_B03.b1_A002 Acid- and alkal... 195 9e-069
gb|CL173774.1|CL173774 104_377_10891106_116_31793_242 Sorgh... 260 2e-068
gb|CL173775.1|CL173775 104_377_10891106_148_31792_242 Sorgh... 260 2e-068
gb|CW315423.1|CW315423 104_806_11472351_148_35827_056 Sorgh... 260 2e-068
gb|BG948233.1|BG948233 IP1_10_H11.g1_A002 Immature pannicle... 231 3e-068
gb|CN138952.1|CN138952 OX1_15_D09.b1_A002 Oxidatively-stres... 195 1e-067
gb|CW460986.1|CW460986 fsbb001f208h04f0 Sorghum methylation... 257 2e-067
gb|BE359207.1|BE359207 DG1_39_C05.g1_A002 Dark Grown 1 (DG1... 252 7e-066
gb|BE358841.1|BE358841 DG1_32_D06.g1_A002 Dark Grown 1 (DG1... 245 8e-064
gb|BE918444.1|BE918444 OV1_3_G09.g1_A002 Ovary 1 (OV1) Sorg... 245 8e-064
gb|BE358732.1|BE358732 DG1_31_D02.g1_A002 Dark Grown 1 (DG1... 195 1e-063
gb|BG487962.1|BG487962 RHIZ2_61_D12.g1_A003 Rhizome2 (RHIZ2... 244 2e-063
gb|CN129246.1|CN129246 RHOH1_34_G08.b3_A002 Acid- and alkal... 195 2e-063
gb|CW220801.1|CW220801 104_655_11197555_116_37153_070 Sorgh... 160 2e-063
gb|BE355038.1|BE355038 DG1_10_B12.g1_A002 Dark Grown 1 (DG1... 195 2e-062
gb|BE360494.1|BE360494 DG1_63_B03.g1_A002 Dark Grown 1 (DG1... 240 3e-062
gb|BG101760.1|BG101760 RHIZ2_21_A04.g1_A003 Rhizome2 (RHIZ2... 236 4e-061
gb|BG932930.1|BG932930 DG1_69_B03.g1_A002 Dark Grown 1 (DG1... 195 6e-061
gb|CW246218.1|CW246218 104_707_11221250_116_35083_013 Sorgh... 229 1e-059
gb|BE355461.1|BE355461 DG1_114_C11.g1_A002 Dark Grown 1 (DG... 195 1e-059
gb|CN125016.1|CN125016 RHOH1_8_H01.b1_A002 Acid- and alkali... 195 7e-059
gb|CF072290.1|CF072290 FE1_7_F11.b1_A002 Iron-deficient see... 195 3e-058
gb|CW436719.1|CW436719 fsbb001f153h11k0 Sorghum methylation... 195 3e-058
gb|CW220802.1|CW220802 104_655_11197555_148_37154_070 Sorgh... 141 1e-057
gb|CW442302.1|CW442302 fsbb001f161o10k0 Sorghum methylation... 224 2e-057
gb|BE361256.1|BE361256 DG1_70_D10.g1_A002 Dark Grown 1 (DG1... 221 9e-057
gb|BE361202.1|BE361202 DG1_70_F03.g1_A002 Dark Grown 1 (DG1... 195 4e-056
gb|BG239851.1|BG239851 OV1_29_G11.g1_A002 Ovary 1 (OV1) Sor... 195 3e-055
gb|BG103102.1|BG103102 RHIZ2_18_B11.g1_A003 Rhizome2 (RHIZ2... 195 3e-055
gb|CD221354.1|CD221354 CCC1_54_F07.b1_A007 Callus culture/c... 195 3e-054
gb|BE355327.1|BE355327 DG1_114_H09.b1_A002 Dark Grown 1 (DG... 195 4e-053
gb|BE355405.1|BE355405 DG1_114_H09.b2_A002 Dark Grown 1 (DG... 195 4e-053
gb|CW176959.1|CW176959 104_590_11158763_148_36591_046 Sorgh... 209 7e-053
gb|BG356951.1|BG356951 OV2_12_A10.g1_A002 Ovary 2 (OV2) Sor... 195 6e-051
gb|BG273178.1|BG273178 OV2_27_G08.g1_A002 Ovary 2 (OV2) Sor... 171 1e-050
gb|BE355472.1|BE355472 DG1_114_H09.g1_A002 Dark Grown 1 (DG... 143 2e-049
gb|CW297734.1|CW297734 104_780_11462198_148_35653_063 Sorgh... 195 9e-049
gb|BE592930.1|BE592930 WS1_92_B10.b1_A002 Water-stressed 1 ... 195 9e-049
gb|CD223110.1|CD223110 CCC1_26_F03.b1_A007 Callus culture/c... 195 9e-049
gb|CD224320.1|CD224320 CCC1_33_H03.b1_A007 Callus culture/c... 195 9e-049
gb|CD224791.1|CD224791 CCC1_36_B03.b1_A007 Callus culture/c... 195 9e-049
gb|BE367050.1|BE367050 PI1_42_D08.g2_A002 Pathogen induced ... 194 1e-048
gb|BG355763.2|BG355763 EM1_19_C06.b1_A002 Embryo 1 (EM1) So... 194 1e-048
gb|CN131413.1|CN131413 RHOH1_48_A02.b1_A002 Acid- and alkal... 194 1e-048
gb|BM318326.1|BM318326 PI1_77_C08.g9_A002 Pathogen induced ... 193 4e-048
gb|BG412632.1|BG412632 OV2_36_H06.g1_A002 Ovary 2 (OV2) Sor... 149 8e-048
gb|BE364574.2|BE364574 PI1_15_H09.g1_A002 Pathogen induced ... 191 1e-047
gb|CX608397.1|CX608397 ANR1_38_H10.b1_A002 Anaerobic roots ... 191 1e-047
gb|BE359598.1|BE359598 DG1_54_H12.g2_A002 Dark Grown 1 (DG1... 190 3e-047
gb|CX622505.1|CX622505 GABR1_64_H04.b2_A002 GA- or brassino... 190 3e-047
gb|AW745482.1|AW745482 WS1_35_G01.b1_A002 Water-stressed 1 ... 188 1e-046
gb|BE360475.1|BE360475 DG1_63_E06.g1_A002 Dark Grown 1 (DG1... 188 1e-046
gb|BG932961.1|BG932961 DG1_69_E04.g1_A002 Dark Grown 1 (DG1... 188 1e-046
gb|BE356652.1|BE356652 DG1_126_A06.g1_A002 Dark Grown 1 (DG... 186 4e-046
gb|CD431991.1|CD431991 ETH1_12_C08.b1_A002 Ethylene-treated... 186 4e-046
gb|CF072697.1|CF072697 FE1_25_E09.b1_A002 Iron-deficient se... 183 4e-045
gb|CD426231.1|CD426231 SA1_19_D09.b1_A002 Salicylic acid-tr... 179 6e-044
gb|BI211453.1|BI211453 IP1_57_A06.g1_A002 Immature pannicle... 174 1e-042
gb|BE360152.1|BE360152 DG1_61_D02.g2_A002 Dark Grown 1 (DG1... 172 5e-042
gb|BE360126.1|BE360126 DG1_61_D02.g1_A002 Dark Grown 1 (DG1... 170 3e-041
gb|BE362449.1|BE362449 DG1_86_G01.g1_A002 Dark Grown 1 (DG1... 165 1e-039
gb|BG356009.2|BG356009 EM1_19_C06.g1_A002 Embryo 1 (EM1) So... 165 1e-039
gb|CW322470.1|CW322470 104_816_11476115_116_35953_044 Sorgh... 103 2e-038
gb|CD226034.1|CD226034 CCC1_43_C09.b1_A007 Callus culture/c... 160 3e-038
gb|CW482625.1|CW482625 fsbb001f242n03k0 Sorghum methylation... 159 5e-038
gb|CW322471.1|CW322471 104_816_11476115_148_35952_044 Sorgh... 158 1e-037
gb|AW922837.1|AW922837 DG1_46_C11.g1_A002 Dark Grown 1 (DG1... 158 1e-037
gb|BE366988.1|BE366988 PI1_42_D08.g1_A002 Pathogen induced ... 158 1e-037
gb|BE359155.1|BE359155 DG1_39_C05.b1_A002 Dark Grown 1 (DG1... 148 1e-037
gb|BG558058.1|BG558058 RHIZ2_66_B02.g1_A003 Rhizome2 (RHIZ2... 157 2e-037
gb|CW221367.1|CW221367 104_656_11197867_116_37452_074 Sorgh... 85 1e-036
gb|CW388607.1|CW388607 fsbb001f073h01k0 Sorghum methylation... 103 2e-036
gb|AW565319.1|AW565319 LG1_342_A09.g1_A002 Light Grown 1 (L... 149 4e-035
gb|BE360990.1|BE360990 DG1_68_E08.g1_A002 Dark Grown 1 (DG1... 149 4e-035
gb|BF585486.1|BF585486 FM1_23_B02.g1_A003 Floral-Induced Me... 149 4e-035
gb|AW923056.1|AW923056 DG1_48_F12.g1_A002 Dark Grown 1 (DG1... 148 1e-034
gb|CW297733.1|CW297733 104_780_11462198_116_35649_063 Sorgh... 147 2e-034
gb|BG054269.1|BG054269 OV2_4_D10.g1_A002 Ovary 2 (OV2) Sorg... 147 2e-034
gb|BG947157.1|BG947157 IP1_3_C03.g1_A002 Immature pannicle ... 147 2e-034
gb|BI245526.1|BI245526 IP1_66_E07.g1_A002 Immature pannicle... 147 2e-034
gb|CD426221.1|CD426221 SA1_19_A02.b1_A002 Salicylic acid-tr... 147 2e-034
gb|CF427528.1|CF427528 PH1_16_G05.b1_A002 Phosphorous-defic... 147 2e-034
gb|CF431298.1|CF431298 NIT1_5_B12.b1_A002 Nitrogen-deficien... 147 2e-034
gb|CW150734.1|CW150734 104_551_11143570_148_36313_043 Sorgh... 147 3e-034
gb|AW677269.1|AW677269 DG1_6_C02.g1_A002 Dark Grown 1 (DG1)... 144 1e-033
gb|CD220727.1|CD220727 CCC1_69_D11.b1_A007 Callus culture/c... 144 1e-033
gb|BE355572.1|BE355572 DG1_115_C11.b1_A002 Dark Grown 1 (DG... 143 5e-033
gb|CX619982.1|CX619982 GABR1_49_D04.b1_A002 GA- or brassino... 111 1e-032
gb|BG049661.1|BG049661 EM1_7_D05.g1_A002 Embryo 1 (EM1) Sor... 140 3e-032
gb|CD463381.1|CD463381 ETH1_44_H01.b1_A002 Ethylene-treated... 140 3e-032
gb|BI099244.1|BI099244 IP1_40_D02.g1_A002 Immature pannicle... 139 4e-032
gb|BF481310.1|BF481310 FM1_18_D04.g1_A003 Floral-Induced Me... 138 2e-031
gb|BG052269.1|BG052269 RHIZ2_12_D09.g1_A003 Rhizome2 (RHIZ2... 105 2e-031
gb|BF704912.1|BF704912 FM1_46_B04.g2_A003 Floral-Induced Me... 100 3e-031
gb|CW463400.1|CW463400 fsbb001f211p20f0 Sorghum methylation... 124 2e-030
gb|CF074261.1|CF074261 FE1_23_H08.b1_A002 Iron-deficient se... 133 3e-030
gb|BM323365.1|BM323365 PIC1_18_D12.b1_A002 Pathogen-infecte... 129 7e-030
gb|CW460987.1|CW460987 fsbb001f208h04k0 Sorghum methylation... 132 1e-029
gb|BI075504.1|BI075504 IP1_21_D02.g1_A002 Immature pannicle... 129 7e-029
gb|BE358315.1|BE358315 DG1_29_B04.b1_A002 Dark Grown 1 (DG1... 124 2e-028
gb|BF587927.1|BF587927 FM1_34_F02.g1_A003 Floral-Induced Me... 126 6e-028
gb|BG241551.1|BG241551 RHIZ2_17_A01.g1_A003 Rhizome2 (RHIZ2... 126 6e-028
gb|BG557612.1|BG557612 EM1_54_A03.g1_A002 Embryo 1 (EM1) So... 125 8e-028
gb|BG158592.1|BG158592 RHIZ2_42_E08.g1_A003 Rhizome2 (RHIZ2... 100 5e-027
gb|BE362573.1|BE362573 DG1_87_D07.g1_A002 Dark Grown 1 (DG1... 105 1e-021
gb|BF656584.1|BF656584 FM1_51_H09.g1_A003 Floral-Induced Me... 105 1e-021
gb|AW285466.2|AW285466 LG1_251_H09.g1_A002 Light Grown 1 (L... 103 4e-021
gb|BE360089.1|BE360089 DG1_61_D02.b1_A002 Dark Grown 1 (DG1... 103 4e-021
gb|BE360375.1|BE360375 DG1_63_E06.b1_A002 Dark Grown 1 (DG1... 103 4e-021
gb|BI351177.1|BI351177 IP1_70_H04.g1_A002 Immature pannicle... 103 5e-021
>gb|AW677701.1|AW677701 WS1_10_H08.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 571
Score = 390 bits (846), Expect = e-107
Identities = 167/178 (93%), Positives = 169/178 (94%)
Frame = +2 / -1
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
ARKVLTTSL GDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHA
Sbjct: 550 ARKVLTTSLDGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHALA 371
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
SGEAEKDASASVFSKINRFEE LREALPREMEAARVAFETG API NRIK+SRSYPLYRF
Sbjct: 370 SGEAEKDASASVFSKINRFEEALREALPREMEAARVAFETGTAPIGNRIKDSRSYPLYRF 191
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC*GRHR 640
IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPML+CLKEWDGKPLPIC* R
Sbjct: 190 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLECLKEWDGKPLPIC*AAGR 17
Score = 324 bits (701), Expect = 2e-087
Identities = 146/180 (81%), Positives = 146/180 (81%)
Frame = -2 / +3
Query: 645 WHRWRPQQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRM 466
W R QMGRGLPSHSLR SSMGSMSLPSL ARNTLLHSSPGDLSFSPVRYTAPRSWRM
Sbjct: 12 WRRPAA*QMGRGLPSHSLRHSSMGSMSLPSLSARNTLLHSSPGDLSFSPVRYTAPRSWRM 191
Query: 465 KRYSGYDRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPL 286
KRYSGYDRLSLILL IGA PVS AT LE TDALASFSASPL
Sbjct: 192 KRYSGYDRLSLILLPIGAVPVSNATRAASISLGSASLSASSNLLILEKTDALASFSASPL 371
Query: 285 GGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTFLA 106
AWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSP RLVVSTFLA
Sbjct: 372 ARAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPSRLVVSTFLA 551
Score = 137 bits (293), Expect(2) = 2e-034
Identities = 67/101 (66%), Positives = 69/101 (68%)
Frame = -1 / +2
Query: 625 ADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQRVR 446
ADGQGLAVPLLEA+EHGVDELALAE QEH GQVHGAEVLADEAVQRVR
Sbjct: 32 ADGQGLAVPLLEALEHGVDELALAERQEHLVALLAGGLELLAGQVHGAEVLADEAVQRVR 211
Query: 445 PALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
PA+LDPV DRR GQRL LLEPVDLGE
Sbjct: 212 PAVLDPVADRRRARLERHAGGLHLPGQRLP*RLLEPVDLGE 334
Score = 32.2 bits (64), Expect(2) = 2e-034
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1 / +2
Query: 187 DGGEQGLLXXXXXXXXXXXAGGQHLPG 107
DGGEQGLL A G+H PG
Sbjct: 470 DGGEQGLLAEARAVEVAVEASGEHFPG 550
>gb|BG047581.1|BG047581 OV1_25_F09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 577
Score = 389 bits (844), Expect = e-107
Identities = 166/174 (95%), Positives = 168/174 (96%)
Frame = +2 / +2
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
ARKVLTTSL GDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHA
Sbjct: 47 ARKVLTTSLDGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHALA 226
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
SGEAEKDASASVFSKINRFEE LREALPREMEAARVAFETG API NRIK+SRSYPLYRF
Sbjct: 227 SGEAEKDASASVFSKINRFEEALREALPREMEAARVAFETGTAPIGNRIKDSRSYPLYRF 406
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC* 628
IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPML+CLKEWDGKPLPIC*
Sbjct: 407 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLECLKEWDGKPLPIC* 568
Score = 321 bits (695), Expect = 1e-086
Identities = 144/173 (83%), Positives = 144/173 (83%)
Frame = -2 / -2
Query: 624 QMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYD 445
QMGRGLPSHSLR SSMGSMSLPSL ARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYD
Sbjct: 564 QMGRGLPSHSLRHSSMGSMSLPSLSARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYD 385
Query: 444 RLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTS 265
RLSLILL IGA PVS AT LE TDALASFSASPL AWSTS
Sbjct: 384 RLSLILLPIGAVPVSNATRAASISLGSASLSASSNLLILEKTDALASFSASPLARAWSTS 205
Query: 264 TARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTFLA 106
TARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSP RLVVSTFLA
Sbjct: 204 TARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPSRLVVSTFLA 46
Score = 137 bits (293), Expect(2) = 2e-034
Identities = 67/101 (66%), Positives = 69/101 (68%)
Frame = -1 / -1
Query: 625 ADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQRVR 446
ADGQGLAVPLLEA+EHGVDELALAE QEH GQVHGAEVLADEAVQRVR
Sbjct: 565 ADGQGLAVPLLEALEHGVDELALAERQEHLVALLAGGLELLAGQVHGAEVLADEAVQRVR 386
Query: 445 PALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
PA+LDPV DRR GQRL LLEPVDLGE
Sbjct: 385 PAVLDPVADRRRARLERHAGGLHLPGQRLP*RLLEPVDLGE 263
Score = 32.2 bits (64), Expect(2) = 2e-034
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1 / -1
Query: 187 DGGEQGLLXXXXXXXXXXXAGGQHLPG 107
DGGEQGLL A G+H PG
Sbjct: 127 DGGEQGLLAEARAVEVAVEASGEHFPG 47
>gb|BG948544.1|BG948544 IP1_10_H11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 599
Score = 388 bits (842), Expect = e-107
Identities = 166/177 (93%), Positives = 168/177 (94%)
Frame = +2 / +3
Query: 110 RKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPS 289
RKVLTTSL GDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHA S
Sbjct: 6 RKVLTTSLDGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHALAS 185
Query: 290 GEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFI 469
GEAEKDASASVFSKINRFEE LREALPREMEAARVAFETG API NRIK+SRSYPLYRFI
Sbjct: 186 GEAEKDASASVFSKINRFEEALREALPREMEAARVAFETGTAPIGNRIKDSRSYPLYRFI 365
Query: 470 RQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC*GRHR 640
RQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPML+CLKEWDGKPLPIC* R
Sbjct: 366 RQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLECLKEWDGKPLPIC*AAGR 536
Score = 324 bits (701), Expect = 2e-087
Identities = 146/183 (79%), Positives = 146/183 (79%)
Frame = -2 / -2
Query: 657 GLASWHRWRPQQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPR 478
G W R QMGRGLPSHSLR SSMGSMSLPSL ARNTLLHSSPGDLSFSPVRYTAPR
Sbjct: 553 GAGRWRRPAA*QMGRGLPSHSLRHSSMGSMSLPSLSARNTLLHSSPGDLSFSPVRYTAPR 374
Query: 477 SWRMKRYSGYDRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFS 298
SWRMKRYSGYDRLSLILL IGA PVS AT LE TDALASFS
Sbjct: 373 SWRMKRYSGYDRLSLILLPIGAVPVSNATRAASISLGSASLSASSNLLILEKTDALASFS 194
Query: 297 ASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVS 118
ASPL AWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSP RLVVS
Sbjct: 193 ASPLARAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPSRLVVS 14
Query: 117 TFL 109
TFL
Sbjct: 13 TFL 5
Score = 137 bits (293), Expect(2) = 2e-033
Identities = 67/101 (66%), Positives = 69/101 (68%)
Frame = -1 / -1
Query: 625 ADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQRVR 446
ADGQGLAVPLLEA+EHGVDELALAE QEH GQVHGAEVLADEAVQRVR
Sbjct: 521 ADGQGLAVPLLEALEHGVDELALAERQEHLVALLAGGLELLAGQVHGAEVLADEAVQRVR 342
Query: 445 PALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
PA+LDPV DRR GQRL LLEPVDLGE
Sbjct: 341 PAVLDPVADRRRARLERHAGGLHLPGQRLP*RLLEPVDLGE 219
Score = 29.5 bits (58), Expect(2) = 2e-033
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1 / -1
Query: 187 DGGEQGLLXXXXXXXXXXXAGGQHLP 110
DGGEQGLL A G+H P
Sbjct: 83 DGGEQGLLAEARAVEVAVEASGEHFP 6
>gb|BG102506.1|BG102506 RHIZ2_33_H09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 606
Score = 354 bits (768), Expect(2) = e-102
Identities = 150/161 (93%), Positives = 153/161 (95%)
Frame = +2 / +2
Query: 158 FSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASASVFSKIN 337
FSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHA SGEAEKDASASVFSKIN
Sbjct: 2 FSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHALASGEAEKDASASVFSKIN 181
Query: 338 RFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKS 517
RFEE LREALPREMEAARVAFETG API NRIK+SRSYPLYRFIRQDLGAVYLTGEKLKS
Sbjct: 182 RFEEALREALPREMEAARVAFETGTAPIGNRIKDSRSYPLYRFIRQDLGAVYLTGEKLKS 361
Query: 518 PGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC*GRHR 640
PGEECNKVFLA+SEGKLIDPML+CLKEWDGKPLPIC* R
Sbjct: 362 PGEECNKVFLAISEGKLIDPMLECLKEWDGKPLPIC*AAGR 484
Score = 287 bits (621), Expect(2) = 3e-080
Identities = 130/167 (77%), Positives = 131/167 (78%)
Frame = -2 / -1
Query: 657 GLASWHRWRPQQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPR 478
G W R QMGRGLPSHSLR SSMGSMSLPSL ARNTLLHSSPGDLSFSPVRYTAPR
Sbjct: 501 GAGRWRRPAA*QMGRGLPSHSLRHSSMGSMSLPSLIARNTLLHSSPGDLSFSPVRYTAPR 322
Query: 477 SWRMKRYSGYDRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFS 298
SWRMKRYSGYDRLSLILL +GA PVS AT LE TDALASFS
Sbjct: 321 SWRMKRYSGYDRLSLILLPMGAVPVSNATRAASISLGSASLSASSNLLILEKTDALASFS 142
Query: 297 ASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLK 157
ASPL AWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLK
Sbjct: 141 ASPLARAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLK 1
Score = 130 bits (279), Expect(3) = 6e-033
Identities = 64/101 (63%), Positives = 67/101 (66%)
Frame = -1 / -3
Query: 625 ADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQRVR 446
ADGQGLAVPLLEA+EHGVDELAL + QEH GQVHGAEVLADEAVQRVR
Sbjct: 469 ADGQGLAVPLLEALEHGVDELALTDRQEHLVALLAGGLELLAGQVHGAEVLADEAVQRVR 290
Query: 445 PALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
PA+LDPV D R GQRL LLEPVDLGE
Sbjct: 289 PAVLDPVADGRRARLERHAGGLHLPGQRLP*RLLEPVDLGE 167
Score = 40.9 bits (83), Expect(2) = e-102
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +2 / +3
Query: 629 GRHRCQDARPQEEEMTPYAREEEIKKGVFRYSQ 727
GR R Q+AR RE+EIKKGVF+YSQ
Sbjct: 492 GRRRRQEARGSRRRSHRTVREKEIKKGVFQYSQ 590
Score = 33.6 bits (67), Expect(2) = 3e-080
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -3 / -1
Query: 728 LENTEILPSLFLPRAHTVSSPPLAVLHLGTG 636
LENTEILPSLFL R +L LG G
Sbjct: 591 LENTEILPSLFLSRVRYGVISSSILLPLGAG 499
Score = 30.9 bits (61), Expect(3) = 6e-033
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1 / -2
Query: 727 LRIPKYSLLYFFLA 686
LRI KYSLLYFFLA
Sbjct: 590 LRILKYSLLYFFLA 549
Score = 22.1 bits (42), Expect(3) = 6e-033
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1 / -3
Query: 187 DGGEQGLL 164
DGGEQGLL
Sbjct: 31 DGGEQGLL 8
>gb|CW234030.1|CW234030 104_687_11213762_148_37379_005 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11213762, DNA
sequence
Length = 644
Score = 321 bits (695), Expect(2) = 3e-089
Identities = 139/148 (93%), Positives = 141/148 (95%)
Frame = +2 / +2
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
ARKVLTTSL GDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHA
Sbjct: 200 ARKVLTTSLDGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHALA 379
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
SGEAEKDASASVFSKINRFEE LREALPREMEAARVAFETG API NRIK+SRSYPLYRF
Sbjct: 380 SGEAEKDASASVFSKINRFEEALREALPREMEAARVAFETGTAPIGNRIKDSRSYPLYRF 559
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLA 550
IRQDLGAVYLTGEKLKSPGEEC +VFLA
Sbjct: 560 IRQDLGAVYLTGEKLKSPGEECKQVFLA 643
Score = 267 bits (577), Expect(2) = 4e-071
Identities = 120/148 (81%), Positives = 120/148 (81%)
Frame = -2 / -3
Query: 549 ARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDRLSLILLAIGAAPVSKATXXXXXXX 370
ARNT LHSSPGDLSFSPVRYTAPRSWRMKRYSGYDRLSLILL IGA PVS AT
Sbjct: 642 ARNTCLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDRLSLILLPIGAVPVSNATRAASISL 463
Query: 369 XXXXXXXXXXXXXLENTDALASFSASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASR 190
LE TDALASFSASPL AWSTSTARIFFIRGELALQGSS*YPYTASR
Sbjct: 462 GSASLSASSNLLILEKTDALASFSASPLARAWSTSTARIFFIRGELALQGSS*YPYTASR 283
Query: 189 SMAVSRAFSLKRALWRSPPRLVVSTFLA 106
SMAVSRAFSLKRALWRSP RLVVSTFLA
Sbjct: 282 SMAVSRAFSLKRALWRSPSRLVVSTFLA 199
Score = 29.5 bits (58), Expect(2) = 3e-089
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +1
Query: 57 PPRGEPQERRK 89
PPRGEPQERR+
Sbjct: 148 PPRGEPQERRQ 180
Score = 23.1 bits (44), Expect(2) = 4e-071
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -2 / -2
Query: 84 GALEVLLEVA 55
GALEVLLEVA
Sbjct: 175 GALEVLLEVA 146
>gb|CW314845.1|CW314845 104_805_11472043_148_35821_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472043, DNA
sequence
Length = 714
Score = 306 bits (662), Expect(2) = 1e-084
Identities = 133/140 (95%), Positives = 134/140 (95%)
Frame = +2 / -1
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
ARKVLTTSL GDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHA
Sbjct: 420 ARKVLTTSLDGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHALA 241
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
SGEAEKDASASVFSKINRFEE LREALPREMEAARVAFETG API NRIK+SRSYPLYRF
Sbjct: 240 SGEAEKDASASVFSKINRFEEALREALPREMEAARVAFETGTAPIGNRIKDSRSYPLYRF 61
Query: 467 IRQDLGAVYLTGEKLKSPGE 526
IRQDLGAVYLTGEKLKSPGE
Sbjct: 60 IRQDLGAVYLTGEKLKSPGE 1
Score = 251 bits (542), Expect(2) = 3e-066
Identities = 113/140 (80%), Positives = 113/140 (80%)
Frame = -2 / +2
Query: 525 SPGDLSFSPVRYTAPRSWRMKRYSGYDRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXX 346
SPGDLSFSPVRYTAPRSWRMKRYSGYDRLSLILL IGA PVS AT
Sbjct: 2 SPGDLSFSPVRYTAPRSWRMKRYSGYDRLSLILLPIGAVPVSNATRAASISLGSASLSAS 181
Query: 345 XXXXXLENTDALASFSASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAF 166
LE TDALASFSASPL AWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAF
Sbjct: 182 SNLLILEKTDALASFSASPLARAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAF 361
Query: 165 SLKRALWRSPPRLVVSTFLA 106
SLKRALWRSP RLVVSTFLA
Sbjct: 362 SLKRALWRSPSRLVVSTFLA 421
Score = 29.5 bits (58), Expect(2) = 1e-084
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / -3
Query: 57 PPRGEPQERRK 89
PPRGEPQERR+
Sbjct: 472 PPRGEPQERRQ 440
Score = 23.1 bits (44), Expect(2) = 3e-066
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -2 / +1
Query: 84 GALEVLLEVA 55
GALEVLLEVA
Sbjct: 445 GALEVLLEVA 474
>gb|BG047939.1|BG047939 OV1_25_F09.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 679
Score = 269 bits (581), Expect(3) = 1e-079
Identities = 114/124 (91%), Positives = 116/124 (93%)
Frame = +2 / +3
Query: 269 VDHAPPSGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRS 448
VDHA SGEAEKDASASVFSKINRFEE LREALPREMEAARVAFETG API NRIK+SRS
Sbjct: 3 VDHALASGEAEKDASASVFSKINRFEEALREALPREMEAARVAFETGTAPIGNRIKDSRS 182
Query: 449 YPLYRFIRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC* 628
YPLYRFIRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPML+CLKEWDGKPLPIC*
Sbjct: 183 YPLYRFIRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLECLKEWDGKPLPIC* 362
Query: 629 GRHR 640
R
Sbjct: 363 AAGR 374
Score = 210 bits (452), Expect(4) = 6e-059
Identities = 94/130 (72%), Positives = 94/130 (72%)
Frame = -2 / -1
Query: 657 GLASWHRWRPQQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPR 478
G W R QMGRGLPSHSLR SSMGSMSLPSL ARNTLLHSSPGDLSFSPVRYTAPR
Sbjct: 391 GAGRWRRPAA*QMGRGLPSHSLRHSSMGSMSLPSLSARNTLLHSSPGDLSFSPVRYTAPR 212
Query: 477 SWRMKRYSGYDRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFS 298
SWRMKRYSGYDRLSLILL IGA PVS AT LE TDALASFS
Sbjct: 211 SWRMKRYSGYDRLSLILLPIGAVPVSNATRAASISLGSASLSASSNLLILEKTDALASFS 32
Query: 297 ASPLGGAWST 268
ASPL AWST
Sbjct: 31 ASPLARAWST 2
Score = 137 bits (293), Expect(3) = 1e-033
Identities = 67/101 (66%), Positives = 69/101 (68%)
Frame = -1 / -3
Query: 625 ADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQRVR 446
ADGQGLAVPLLEA+EHGVDELALAE QEH GQVHGAEVLADEAVQRVR
Sbjct: 359 ADGQGLAVPLLEALEHGVDELALAERQEHLVALLAGGLELLAGQVHGAEVLADEAVQRVR 180
Query: 445 PALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
PA+LDPV DRR GQRL LLEPVDLGE
Sbjct: 179 PAVLDPVADRRRARLERHAGGLHLPGQRLP*RLLEPVDLGE 57
Score = 36.3 bits (73), Expect(3) = 1e-079
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +2 / +3
Query: 662 EEEMTPYAREEEIKKGVFRYSQAGFISFAI* 754
EEE+TPY E K+G GFISFAI*
Sbjct: 414 EEEITPYRMRERNKEGSIFQYSQGFISFAI* 506
Score = 32.2 bits (64), Expect(3) = 1e-079
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2 / +3
Query: 761 LYVVPLYSSFLFGACSSDRVNVYSVCCSWLSHLQYVL 871
LYVV L SSF S V+ +CCS+L+ + +
Sbjct: 522 LYVVVLCSSFFCDCSSDPCKRVFCLCCSYLAAMSLAM 632
Score = 31.8 bits (63), Expect(4) = 6e-059
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 843 EQQTEYTFTRSLLQAPNKKDEYRGTTYND 757
EQQ + T L KKDE+R TTYN+
Sbjct: 604 EQQRQNTRLHGSLLQSQKKDEHRTTTYNN 518
Score = 23.1 bits (44), Expect(3) = 1e-033
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1 / -3
Query: 757 SSDRKRYEACLRIPKYSLLYFFLARIRCHLLL 662
+S+RKR EA + F +RC LLL
Sbjct: 509 TSNRKRNEALRILKNTPFFIPFSHTVRCDLLL 414
Score = 22.6 bits (43), Expect(4) = 6e-059
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 715 KYSLLYFFLA 686
KYSLLY FLA
Sbjct: 468 KYSLLYSFLA 439
Score = 22.6 bits (43), Expect(3) = 1e-033
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3 / -1
Query: 845 KNNRQNTRLHDHCYKLQTK 789
+ RQNTRLH + Q K
Sbjct: 604 EQQRQNTRLHGSLLQSQKK 548
Score = 22.1 bits (42), Expect(4) = 6e-059
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / -1
Query: 756 LQIANDMKP 730
LQIAN+MKP
Sbjct: 508 LQIANEMKP 482
>gb|CW150733.1|CW150733 104_551_11143570_116_36314_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11143570, DNA
sequence
Length = 657
Score = 281 bits (609), Expect(2) = 2e-077
Identities = 116/174 (66%), Positives = 142/174 (81%)
Frame = +2 / +3
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
A+K L+TS G LH+ARF EK LLTAIDREAV+ Y DDPCSAN PLM+K+R+VLV+HA
Sbjct: 57 AKKTLSTSATGGLHNARFCEKDLLTAIDREAVFAYADDPCSANYPLMQKMRSVLVEHALA 236
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+GEAE+D SVF+K+ FEEELR ALPRE++AAR A E G A + NRI E RSYPLYRF
Sbjct: 237 NGEAERDPETSVFAKVATFEEELRAALPREVDAARAAVENGTAAVPNRIAECRSYPLYRF 416
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC* 628
+R++LG YLTGEK +SPGEE NKVF+A++ GK ID +L+CLKEW+G+PLPIC*
Sbjct: 417 VREELGTEYLTGEKTRSPGEEVNKVFVAMNLGKHIDAVLECLKEWNGEPLPIC* 578
Score = 200 bits (432), Expect(2) = 3e-051
Identities = 100/174 (57%), Positives = 105/174 (60%)
Frame = -2 / -3
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQ+GRG P HSLR SS SM LP A NTL SSPGDL FSPVRY+ P S R YSGY
Sbjct: 577 QQIGRGSPFHSLRHSSTASMCLPRFIATNTLFTSSPGDLVFSPVRYSVPSSSRTNLYSGY 398
Query: 447 DRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWST 268
DR S IL A P S A L NTD S SASPL A ST
Sbjct: 397 DRHSAILFGTAAVPFSTAARAASTSRGSAARSSSSNVATLANTDVSGSRSASPLASACST 218
Query: 267 STARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTFLA 106
ST RIF I G LALQGSS Y TASRS+AVSR+FS KRALWR P LV+S FLA
Sbjct: 217 STDRIFCISG*LALQGSSAYANTASRSIAVSRSFSQKRALWRPPVALVLSVFLA 56
Score = 29.5 bits (58), Expect(2) = 2e-077
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +2
Query: 57 PPRGEPQERRK 89
PPRGEPQERR+
Sbjct: 5 PPRGEPQERRE 37
Score = 23.1 bits (44), Expect(2) = 3e-051
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -2 / -2
Query: 84 GALEVLLEVA 55
GALEVLLEVA
Sbjct: 32 GALEVLLEVA 3
>gb|BG932956.1|BG932956 DG1_69_D11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 667
Score = 259 bits (559), Expect(3) = 1e-076
Identities = 109/117 (93%), Positives = 111/117 (94%)
Frame = +2 / +2
Query: 290 GEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFI 469
GEAEKDASASVFSKINRFEE LREALPREMEAARVAFETG API NRIK+SRSYPLYRFI
Sbjct: 2 GEAEKDASASVFSKINRFEEALREALPREMEAARVAFETGTAPIGNRIKDSRSYPLYRFI 181
Query: 470 RQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC*GRHR 640
RQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPML+CLKEWDGKPLPIC* R
Sbjct: 182 RQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLECLKEWDGKPLPIC*AAGR 352
Score = 198 bits (426), Expect(4) = 2e-055
Identities = 89/123 (72%), Positives = 89/123 (72%)
Frame = -2 / -2
Query: 657 GLASWHRWRPQQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPR 478
G W R QMGRGLPSHSLR SSMGSMSLPSL ARNTLLHSSPGDLSFSPVRYTAPR
Sbjct: 369 GAGRWRRPAA*QMGRGLPSHSLRHSSMGSMSLPSLSARNTLLHSSPGDLSFSPVRYTAPR 190
Query: 477 SWRMKRYSGYDRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFS 298
SWRMKRYSGYDRLSLILL IGA PVS AT LE TDALASFS
Sbjct: 189 SWRMKRYSGYDRLSLILLPIGAVPVSNATRAASISLGSASLSASSNLLILEKTDALASFS 10
Query: 297 ASP 289
ASP
Sbjct: 9 ASP 1
Score = 137 bits (293), Expect(3) = 1e-033
Identities = 67/101 (66%), Positives = 69/101 (68%)
Frame = -1 / -1
Query: 625 ADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQRVR 446
ADGQGLAVPLLEA+EHGVDELALAE QEH GQVHGAEVLADEAVQRVR
Sbjct: 337 ADGQGLAVPLLEALEHGVDELALAERQEHLVALLAGGLELLAGQVHGAEVLADEAVQRVR 158
Query: 445 PALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
PA+LDPV DRR GQRL LLEPVDLGE
Sbjct: 157 PAVLDPVADRRRARLERHAGGLHLPGQRLP*RLLEPVDLGE 35
Score = 36.3 bits (73), Expect(3) = 1e-076
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +2 / +2
Query: 662 EEEMTPYAREEEIKKGVFRYSQAGFISFAI* 754
EEE+TPY E K+G GFISFAI*
Sbjct: 392 EEEITPYRMRERNKEGSIFQYSQGFISFAI* 484
Score = 32.2 bits (64), Expect(3) = 1e-076
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2 / +2
Query: 761 LYVVPLYSSFLFGACSSDRVNVYSVCCSWLSHLQYVL 871
LYVV L SSF S V+ +CCS+L+ + +
Sbjct: 500 LYVVVLCSSFFCDCSSDPCKRVFCLCCSYLAAMSLAM 610
Score = 31.8 bits (63), Expect(4) = 2e-055
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2 / -2
Query: 843 EQQTEYTFTRSLLQAPNKKDEYRGTTYND 757
EQQ + T L KKDE+R TTYN+
Sbjct: 582 EQQRQNTRLHGSLLQSQKKDEHRTTTYNN 496
Score = 23.1 bits (44), Expect(3) = 1e-033
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1 / -1
Query: 757 SSDRKRYEACLRIPKYSLLYFFLARIRCHLLL 662
+S+RKR EA + F +RC LLL
Sbjct: 487 TSNRKRNEALRILKNTPFFIPFSHTVRCDLLL 392
Score = 22.6 bits (43), Expect(4) = 2e-055
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 715 KYSLLYFFLA 686
KYSLLY FLA
Sbjct: 446 KYSLLYSFLA 417
Score = 22.6 bits (43), Expect(3) = 1e-033
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3 / -2
Query: 845 KNNRQNTRLHDHCYKLQTK 789
+ RQNTRLH + Q K
Sbjct: 582 EQQRQNTRLHGSLLQSQKK 526
Score = 22.1 bits (42), Expect(4) = 2e-055
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / -2
Query: 756 LQIANDMKP 730
LQIAN+MKP
Sbjct: 486 LQIANEMKP 460
>gb|BE366341.1|BE366341 PI1_32_D08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 622
Score = 252 bits (544), Expect(3) = 2e-074
Identities = 107/116 (92%), Positives = 109/116 (93%)
Frame = +2 / +1
Query: 293 EAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIR 472
EAEKDASASVFSKINRFEE LREAL REMEAARVAFETG API NRIK+SRSYPLYRFIR
Sbjct: 1 EAEKDASASVFSKINRFEEALREALXREMEAARVAFETGTAPIGNRIKDSRSYPLYRFIR 180
Query: 473 QDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC*GRHR 640
QDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPML+CLKEWDGKPLPIC* R
Sbjct: 181 QDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLECLKEWDGKPLPIC*AAGR 348
Score = 193 bits (415), Expect(4) = 6e-054
Identities = 88/121 (72%), Positives = 88/121 (72%)
Frame = -2 / -3
Query: 657 GLASWHRWRPQQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPR 478
G W R QMGRGLPSHSLR SSMGSMSLPSL ARNTLLHSSPGDLSFSPVRYTAPR
Sbjct: 365 GAGRWRRPAA*QMGRGLPSHSLRHSSMGSMSLPSLSARNTLLHSSPGDLSFSPVRYTAPR 186
Query: 477 SWRMKRYSGYDRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFS 298
SWRMKRYSGYDRLSLILL IGA PVS AT LE TDALASFS
Sbjct: 185 SWRMKRYSGYDRLSLILLPIGAVPVSNATRAASISLXSASLSASSNLLILEKTDALASFS 6
Query: 297 A 295
A
Sbjct: 5 A 3
Score = 137 bits (293), Expect(3) = 1e-033
Identities = 66/101 (65%), Positives = 68/101 (67%)
Frame = -1 / -2
Query: 625 ADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQRVR 446
ADGQGLAVPLLEA+EHGVDELALAE QEH GQVHGAEVLADEAVQRVR
Sbjct: 333 ADGQGLAVPLLEALEHGVDELALAERQEHLVALLAGGLELLAGQVHGAEVLADEAVQRVR 154
Query: 445 PALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
PA+LDPV DRR QRL LLEPVDLGE
Sbjct: 153 PAVLDPVADRRRARLERHAGGLHLPXQRLP*RLLEPVDLGE 31
Score = 36.3 bits (73), Expect(3) = 2e-074
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +2 / +1
Query: 662 EEEMTPYAREEEIKKGVFRYSQAGFISFAI* 754
EEE+TPY E K+G GFISFAI*
Sbjct: 388 EEEITPYRMRERNKEGSIFQYSQGFISFAI* 480
Score = 32.2 bits (64), Expect(3) = 2e-074
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2 / +1
Query: 761 LYVVPLYSSFLFGACSSDRVNVYSVCCSWLSHLQYVL 871
LYVV L SSF S V+ +CCS+L+ + +
Sbjct: 496 LYVVVLCSSFFCDCSSDPCKRVFCLCCSYLAAMSLAM 606
Score = 31.8 bits (63), Expect(4) = 6e-054
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2 / -3
Query: 843 EQQTEYTFTRSLLQAPNKKDEYRGTTYND 757
EQQ + T L KKDE+R TTYN+
Sbjct: 578 EQQRQNTRLHGSLLQSQKKDEHRTTTYNN 492
Score = 23.1 bits (44), Expect(3) = 1e-033
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1 / -2
Query: 757 SSDRKRYEACLRIPKYSLLYFFLARIRCHLLL 662
+S+RKR EA + F +RC LLL
Sbjct: 483 TSNRKRNEALRILKNTPFFIPFSHTVRCDLLL 388
Score = 22.6 bits (43), Expect(4) = 6e-054
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -1
Query: 715 KYSLLYFFLA 686
KYSLLY FLA
Sbjct: 442 KYSLLYSFLA 413
Score = 22.6 bits (43), Expect(3) = 1e-033
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3 / -3
Query: 845 KNNRQNTRLHDHCYKLQTK 789
+ RQNTRLH + Q K
Sbjct: 578 EQQRQNTRLHGSLLQSQKK 522
Score = 22.1 bits (42), Expect(4) = 6e-054
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / -3
Query: 756 LQIANDMKP 730
LQIAN+MKP
Sbjct: 482 LQIANEMKP 456
>gb|CN129330.1|CN129330 RHOH1_34_G08.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_G08_A002 5', mRNA sequence
Length = 772
Score = 195 bits (420), Expect(2) = 1e-073
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +2 / +1
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 382 DAEREPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 561
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LG V+LTGEKLKSPGEEC KVF +++GKL+DPML+CLKEWDGKPLPI
Sbjct: 562 LGCVFLTGEKLKSPGEECTKVFNGINQGKLVDPMLECLKEWDGKPLPI 705
Score = 124 bits (265), Expect = 2e-027
Identities = 65/131 (49%), Positives = 73/131 (55%)
Frame = -2 / -3
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MG GLPSHSLR SS+GS SLP L NTL+HSSPGDLSFSPVR T P S R KRYSG DR
Sbjct: 704 MGSGLPSHSLRHSSIGSTSLPWLMPLNTLVHSSPGDLSFSPVRNTQPSSSRTKRYSGNDR 525
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LS I A GA P + AT LENT+ S S + ST+
Sbjct: 524 LSAIRFATGAVPSATATRAASTSRGSTARSSSSNLVILENTEGSRSASPLLSAWSTSTAR 345
Query: 261 ARIFFIRGELA 229
+ + R LA
Sbjct: 344 SFVISGRLALA 312
Score = 103 bits (220), Expect(2) = 1e-073
Identities = 45/69 (65%), Positives = 55/69 (79%)
Frame = +2 / +1
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
A+KVLT + GDL SARFSEK L+TAIDRE V+ Y +DP SA+ PLM K+RAVLVDHA
Sbjct: 196 AKKVLTMNPSGDLSSARFSEKELITAIDREGVFTYAEDPASASLPLMTKLRAVLVDHALS 375
Query: 287 SGEAEKDAS 313
SG+AE++ S
Sbjct: 376 SGDAEREPS 402
Score = 89.0 bits (188), Expect(2) = 3e-035
Identities = 45/67 (67%), Positives = 47/67 (70%)
Frame = -2 / -3
Query: 306 SFSASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRL 127
S SASPL AWSTSTAR F I G LAL GSS Y T SRSMAV +FSL RAL RSP
Sbjct: 395 SRSASPLLSAWSTSTARSFVISGRLALAGSSAYVNTPSRSMAVMSSFSLNRALERSPDGF 216
Query: 126 VVSTFLA 106
+VSTF A
Sbjct: 215 MVSTFFA 195
Score = 81.3 bits (171), Expect(2) = 3e-035
Identities = 38/66 (57%), Positives = 42/66 (63%)
Frame = -1 / -2
Query: 622 DGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQRVRP 443
DGQ LAVPLLEA+ H VDELAL + EH Q H AE+LADEAVQR RP
Sbjct: 705 DGQRLAVPLLEAL*HRVDELALVDAVEHLGALLAGGLELLARQEHAAELLADEAVQRERP 526
Query: 442 ALLDPV 425
A+ DPV
Sbjct: 525 AVRDPV 508
>gb|CL164480.1|CL164480 104_358_10807939_114_31814_307 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10807939, DNA
sequence
Length = 754
Score = 274 bits (593), Expect(2) = 4e-073
Identities = 115/180 (63%), Positives = 141/180 (78%)
Frame = +2 / -3
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
A+K L+T+ G LH ARF EK LL I+REAV+ Y DDPCSAN PLMKK+R VLV+ A
Sbjct: 674 AKKTLSTNSTGGLHVARFCEKDLLQEIEREAVFAYADDPCSANYPLMKKLRNVLVERALA 495
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G AE DA SVF+K+ +FEEELR ALP+ +EAAR A E G A I NRI E RSYPLYRF
Sbjct: 494 NGAAEFDAETSVFAKVAQFEEELRAALPKAVEAARAAVENGTAAIPNRITECRSYPLYRF 315
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC*GRHRCQ 646
+RQ++GAVYLTGEK +SPGEE NKV +A+++GK IDP+L+CLKEW+G+PLPIC* R +
Sbjct: 314 VRQEVGAVYLTGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEWNGEPLPIC*TEKRIE 135
Score = 188 bits (405), Expect = 1e-046
Identities = 96/178 (53%), Positives = 107/178 (60%)
Frame = -2 / +1
Query: 639 RWRPQQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKR 460
R+ QQMG G P HSLR SS GSM P L A +TLL SSPG+ FSPVR TAP SWR KR
Sbjct: 142 RFSVQQMGSGSPFHSLRHSSSGSMCFPWLMATSTLLSSSPGERVFSPVR*TAPTSWRTKR 321
Query: 459 YSGYDRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGG 280
SG +R S+ILL I A P S A L TD AS SA+PL
Sbjct: 322 *SG*ERHSVILLGIAAVPFSTAARAASTALGSAARSSSSNWATLAKTDVSASNSAAPLAR 501
Query: 279 AWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTFLA 106
A STST R FF+ G LALQGSS Y TASRS++ SR+FS KRA WR P LV+ F A
Sbjct: 502 ARSTSTLRSFFMSG*LALQGSSAYANTASRSISWSRSFSQKRATWRPPVELVLRVFFA 675
Score = 22.6 bits (43), Expect(2) = 4e-073
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +1 / -3
Query: 58 HLEENLKSAARA 93
H+EEN+KSA ++
Sbjct: 725 HIEENVKSAVKS 690
>gb|BE358396.1|BE358396 DG1_29_B04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 666
Score = 274 bits (593), Expect(2) = 4e-073
Identities = 115/180 (63%), Positives = 141/180 (78%)
Frame = +2 / +1
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
A+K L+T+ G LH ARF EK LL I+REAV+ Y DDPCSAN PLMKK+R VLV+ A
Sbjct: 109 AKKTLSTNSTGGLHVARFCEKDLLQEIEREAVFAYADDPCSANYPLMKKLRNVLVERALA 288
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G AE DA SVF+K+ +FEEELR ALP+ +EAAR A E G A I NRI E RSYPLYRF
Sbjct: 289 NGAAEFDAETSVFAKVAQFEEELRAALPKAVEAARAAVENGTAAIPNRITECRSYPLYRF 468
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC*GRHRCQ 646
+RQ++GAVYLTGEK +SPGEE NKV +A+++GK IDP+L+CLKEW+G+PLPIC* R +
Sbjct: 469 VRQEVGAVYLTGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEWNGEPLPIC*TEKRIE 648
Score = 188 bits (405), Expect = 1e-046
Identities = 96/178 (53%), Positives = 107/178 (60%)
Frame = -2 / -2
Query: 639 RWRPQQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKR 460
R+ QQMG G P HSLR SS GSM P L A +TLL SSPG+ FSPVR TAP SWR KR
Sbjct: 641 RFSVQQMGSGSPFHSLRHSSSGSMCFPWLMATSTLLSSSPGERVFSPVR*TAPTSWRTKR 462
Query: 459 YSGYDRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGG 280
SG +R S+ILL I A P S A L TD AS SA+PL
Sbjct: 461 *SG*ERHSVILLGIAAVPFSTAARAASTALGSAARSSSSNWATLAKTDVSASNSAAPLAR 282
Query: 279 AWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTFLA 106
A STST R FF+ G LALQGSS Y TASRS++ SR+FS KRA WR P LV+ F A
Sbjct: 281 ARSTSTLRSFFMSG*LALQGSSAYANTASRSISWSRSFSQKRATWRPPVELVLRVFFA 108
Score = 22.6 bits (43), Expect(2) = 4e-073
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +1 / +1
Query: 58 HLEENLKSAARA 93
H+EEN+KSA ++
Sbjct: 58 HIEENVKSAVKS 93
>gb|DN551872.1|DN551872 pSPR-RT-MR-H1_G04_C276 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 1191
Score = 272 bits (588), Expect(2) = 2e-072
Identities = 114/174 (65%), Positives = 138/174 (79%)
Frame = +2 / -3
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
A+K L+T+ G LH ARF EK LL I+REAV+ Y DDPCSAN PLMKK+R VLV+ A
Sbjct: 751 AKKTLSTNSTGGLHVARFCEKDLLQEIEREAVFAYADDPCSANYPLMKKLRNVLVERALA 572
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G AE DA SVF+K+ FEEELR ALP+ +EAAR A E G A I NRI E RSYPLYRF
Sbjct: 571 NGAAEFDAETSVFAKVAHFEEELRAALPKAVEAARAAVENGTAAIPNRITECRSYPLYRF 392
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC* 628
+RQ++GAVYLTGEK +SPGEE NKV +A+++GK IDP+L+CLKEW+G+PLPIC*
Sbjct: 391 VRQEVGAVYLTGEKTRSPGEELNKVLVAINKGKHIDPLLECLKEWNGEPLPIC* 230
Score = 187 bits (403), Expect = 2e-046
Identities = 95/174 (54%), Positives = 105/174 (60%)
Frame = -2 / +3
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQMG G P HSLR SS GSM P L A +TLL SSPG+ FSPVR TAP SWR KR SG
Sbjct: 231 QQMGSGSPFHSLRHSSSGSMCFPLLMATSTLLSSSPGERVFSPVR*TAPTSWRTKR*SG* 410
Query: 447 DRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWST 268
+R S+ILL I A P S A L TD AS SA+PL A ST
Sbjct: 411 ERHSVILLGIAAVPFSTAARAASTALGSAARSSSSKWATLAKTDVSASNSAAPLARARST 590
Query: 267 STARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTFLA 106
ST R FF+ G LALQGSS Y TASRS++ SR+FS KRA WR P LV+ F A
Sbjct: 591 STLRSFFMSG*LALQGSSAYANTASRSISWSRSFSQKRATWRPPVELVLRVFFA 752
Score = 22.6 bits (43), Expect(2) = 2e-072
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +1 / -3
Query: 58 HLEENLKSAARA 93
H+EEN+KSA ++
Sbjct: 802 HIEENVKSAVKS 767
>gb|CW091315.1|CW091315 104_453_10998477_114_33030_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10998477, DNA
sequence
Length = 672
Score = 271 bits (586), Expect = 1e-071
Identities = 113/173 (65%), Positives = 138/173 (79%)
Frame = +2 / -2
Query: 110 RKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPS 289
+K L+T+ G LH ARF EK LL I+REAV+ Y DDPCSAN PLMKK+R VLV+ A +
Sbjct: 671 KKTLSTNSTGGLHVARFCEKDLLQEIEREAVFAYADDPCSANYPLMKKLRNVLVERALAN 492
Query: 290 GEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFI 469
G AE DA SVF+K+ +FEEELR ALP+ +EAAR A E G A I NRI E RSYPLYRF+
Sbjct: 491 GAAEFDAETSVFAKVAQFEEELRAALPKAVEAARAAVENGTAAIPNRITECRSYPLYRFV 312
Query: 470 RQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC* 628
RQ++GAVYLTGEK +SPGEE NKV +A+++GK IDP+L+CLKEW+G+PLPIC*
Sbjct: 311 RQEVGAVYLTGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEWNGEPLPIC* 153
Score = 185 bits (398), Expect = 1e-045
Identities = 94/172 (54%), Positives = 104/172 (60%)
Frame = -2 / +1
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQMG G P HSLR SS GSM P L A +TLL SSPG+ FSPVR TAP SWR KR SG
Sbjct: 154 QQMGSGSPFHSLRHSSSGSMCFPWLMATSTLLSSSPGERVFSPVR*TAPTSWRTKR*SG* 333
Query: 447 DRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWST 268
+R S+ILL I A P S A L TD AS SA+PL A ST
Sbjct: 334 ERHSVILLGIAAVPFSTAARAASTALGSAARSSSSNWATLAKTDVSASNSAAPLARARST 513
Query: 267 STARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTF 112
ST R FF+ G LALQGSS Y TASRS++ SR+FS KRA WR P LV+ F
Sbjct: 514 STLRSFFMSG*LALQGSSAYANTASRSISWSRSFSQKRATWRPPVELVLRVF 669
>gb|CN126243.1|CN126243 RHOH1_16_B03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_16_B03_A002 3', mRNA sequence
Length = 753
Score = 195 bits (420), Expect(2) = 9e-069
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +2 / +3
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 147 DAEREPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 326
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LG V+LTGEKLKSPGEEC KVF +++GKL+DPML+CLKEWDGKPLPI
Sbjct: 327 LGCVFLTGEKLKSPGEECTKVFNGINQGKLVDPMLECLKEWDGKPLPI 470
Score = 124 bits (265), Expect = 2e-027
Identities = 65/131 (49%), Positives = 73/131 (55%)
Frame = -2 / -3
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MG GLPSHSLR SS+GS SLP L NTL+HSSPGDLSFSPVR T P S R KRYSG DR
Sbjct: 469 MGSGLPSHSLRHSSIGSTSLPWLMPLNTLVHSSPGDLSFSPVRNTQPSSSRTKRYSGNDR 290
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LS I A GA P + AT LENT+ S S + ST+
Sbjct: 289 LSAIRFATGAVPSATATRAASTSRGSTARSSSSNLVILENTEGSRSASPLLSAWSTSTAR 110
Query: 261 ARIFFIRGELA 229
+ + R LA
Sbjct: 109 SFVISGRLALA 77
Score = 87.2 bits (184), Expect(2) = 9e-069
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = +2 / +3
Query: 149 SARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDAS 313
SARFSEK L+TAIDRE V+ Y +DP SA+ PLM K+RAVLVDHA SG+AE++ S
Sbjct: 3 SARFSEKELITAIDREGVFTYAEDPASASLPLMTKLRAVLVDHALSSGDAEREPS 167
Score = 81.7 bits (172), Expect(2) = 1e-030
Identities = 38/71 (53%), Positives = 43/71 (60%)
Frame = -1 / -2
Query: 637 VASSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAV 458
+ DGQ LAVPLLEA+ H VDELAL + EH Q H AE+LADEAV
Sbjct: 485 LVDDVDGQRLAVPLLEAL*HRVDELALVDAVEHLGALLAGGLELLARQEHAAELLADEAV 306
Query: 457 QRVRPALLDPV 425
QR RPA+ DPV
Sbjct: 305 QRERPAVRDPV 273
Score = 73.5 bits (154), Expect(2) = 1e-030
Identities = 37/53 (69%), Positives = 38/53 (71%)
Frame = -2 / -3
Query: 306 SFSASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRAL 148
S SASPL AWSTSTAR F I G LAL GSS Y T SRSMAV +FSL RAL
Sbjct: 160 SRSASPLLSAWSTSTARSFVISGRLALAGSSAYVNTPSRSMAVMSSFSLNRAL 2
>gb|CL173774.1|CL173774 104_377_10891106_116_31793_242 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10891106, DNA
sequence
Length = 778
Score = 260 bits (562), Expect = 2e-068
Identities = 102/174 (58%), Positives = 139/174 (79%)
Frame = +2 / +3
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
A+K L+ + G LH+ARF EK L TAIDREAV+ Y DDPCS N PLM+K+RAVL++HA
Sbjct: 105 AKKSLSLNARGGLHNARFCEKDLQTAIDREAVFAYADDPCSPNYPLMQKLRAVLIEHALA 284
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G+AE+ S+F+K+ FE+++R ALP+E+EAAR A E+G + NRIKE RSYPLYRF
Sbjct: 285 NGDAERVVETSIFAKVAEFEQQVRAALPKEVEAARAAVESGNPLVPNRIKECRSYPLYRF 464
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC* 628
+R+++G YLTGEK +SPGEE NKV +A+++ K +DP+L+CLKEW+G+PLP+C*
Sbjct: 465 VREEVGTQYLTGEKTRSPGEELNKVLVAINQRKHVDPLLECLKEWNGEPLPLC* 626
Score = 165 bits (355), Expect = 8e-040
Identities = 89/174 (51%), Positives = 95/174 (54%)
Frame = -2 / -1
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQ G G P HSLR SS GS L L A +TL SSPGDL FSPVRY P S R RYSG
Sbjct: 625 QQSGSGSPFHSLRHSSSGSTCLRWLMATSTLFSSSPGDLVFSPVRYWVPTSSRTNRYSG* 446
Query: 447 DRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWST 268
DR SLILL P+S A L D + SASPL A S
Sbjct: 445 DRHSLILLGTRGLPLSTAARAASTSLGSAARTCCSNSATLAKMDVSTTRSASPLASACSI 266
Query: 267 STARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTFLA 106
STAR F I G L L GSS Y TASRS+AV R+FS KRALW P +S FLA
Sbjct: 265 STARSFCISG*LGLHGSSAYANTASRSIAVCRSFSQKRALWSPPLAFRLSDFLA 104
>gb|CL173775.1|CL173775 104_377_10891106_148_31792_242 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10891106, DNA
sequence
Length = 725
Score = 260 bits (562), Expect = 2e-068
Identities = 102/174 (58%), Positives = 139/174 (79%)
Frame = +2 / -3
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
A+K L+ + G LH+ARF EK L TAIDREAV+ Y DDPCS N PLM+K+RAVL++HA
Sbjct: 711 AKKSLSLNARGGLHNARFCEKDLQTAIDREAVFAYADDPCSPNYPLMQKLRAVLIEHALA 532
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G+AE+ S+F+K+ FE+++R ALP+E+EAAR A E+G + NRIKE RSYPLYRF
Sbjct: 531 NGDAERVVETSIFAKVAEFEQQVRAALPKEVEAARAAVESGNPLVPNRIKECRSYPLYRF 352
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC* 628
+R+++G YLTGEK +SPGEE NKV +A+++ K +DP+L+CLKEW+G+PLP+C*
Sbjct: 351 VREEVGTQYLTGEKTRSPGEELNKVLVAINQRKHVDPLLECLKEWNGEPLPLC* 190
Score = 165 bits (355), Expect = 8e-040
Identities = 89/174 (51%), Positives = 95/174 (54%)
Frame = -2 / +2
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQ G G P HSLR SS GS L L A +TL SSPGDL FSPVRY P S R RYSG
Sbjct: 191 QQSGSGSPFHSLRHSSSGSTCLRWLMATSTLFSSSPGDLVFSPVRYWVPTSSRTNRYSG* 370
Query: 447 DRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWST 268
DR SLILL P+S A L D + SASPL A S
Sbjct: 371 DRHSLILLGTRGLPLSTAARAASTSLGSAARTCCSNSATLAKMDVSTTRSASPLASACSI 550
Query: 267 STARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTFLA 106
STAR F I G L L GSS Y TASRS+AV R+FS KRALW P +S FLA
Sbjct: 551 STARSFCISG*LGLHGSSAYANTASRSIAVCRSFSQKRALWSPPLAFRLSDFLA 712
>gb|CW315423.1|CW315423 104_806_11472351_148_35827_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472351, DNA
sequence
Length = 651
Score = 260 bits (562), Expect = 2e-068
Identities = 102/174 (58%), Positives = 139/174 (79%)
Frame = +2 / -2
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
A+K L+ + G LH+ARF EK L TAIDREAV+ Y DDPCS N PLM+K+RAVL++HA
Sbjct: 626 AKKSLSLNARGGLHNARFCEKDLQTAIDREAVFAYADDPCSPNYPLMQKLRAVLIEHALA 447
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G+AE+ S+F+K+ FE+++R ALP+E+EAAR A E+G + NRIKE RSYPLYRF
Sbjct: 446 NGDAERVVETSIFAKVAEFEQQVRAALPKEVEAARAAVESGNPLVPNRIKECRSYPLYRF 267
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC* 628
+R+++G YLTGEK +SPGEE NKV +A+++ K +DP+L+CLKEW+G+PLP+C*
Sbjct: 266 VREEVGTQYLTGEKTRSPGEELNKVLVAINQRKHVDPLLECLKEWNGEPLPLC* 105
Score = 165 bits (355), Expect = 8e-040
Identities = 89/174 (51%), Positives = 95/174 (54%)
Frame = -2 / +1
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQ G G P HSLR SS GS L L A +TL SSPGDL FSPVRY P S R RYSG
Sbjct: 106 QQSGSGSPFHSLRHSSSGSTCLRWLMATSTLFSSSPGDLVFSPVRYWVPTSSRTNRYSG* 285
Query: 447 DRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWST 268
DR SLILL P+S A L D + SASPL A S
Sbjct: 286 DRHSLILLGTRGLPLSTAARAASTSLGSAARTCCSNSATLAKMDVSTTRSASPLASACSI 465
Query: 267 STARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTFLA 106
STAR F I G L L GSS Y TASRS+AV R+FS KRALW P +S FLA
Sbjct: 466 STARSFCISG*LGLHGSSAYANTASRSIAVCRSFSQKRALWSPPLAFRLSDFLA 627
>gb|BG948233.1|BG948233 IP1_10_H11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 639
Score = 231 bits (498), Expect(3) = 3e-068
Identities = 96/104 (92%), Positives = 98/104 (94%)
Frame = +2 / +2
Query: 329 KINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEK 508
KINRFEE LREALPREMEAARVAFETG API NRIK+SRSYPLYRFIRQDLGAVYLTGEK
Sbjct: 2 KINRFEEALREALPREMEAARVAFETGTAPIGNRIKDSRSYPLYRFIRQDLGAVYLTGEK 181
Query: 509 LKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC*GRHR 640
LKSPGEECNKVFLALSEGKLIDPML+CLKEWDGKPLPIC* R
Sbjct: 182 LKSPGEECNKVFLALSEGKLIDPMLECLKEWDGKPLPIC*AAGR 313
Score = 176 bits (379), Expect(4) = 4e-049
Identities = 76/89 (85%), Positives = 76/89 (85%)
Frame = -2 / -1
Query: 657 GLASWHRWRPQQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPR 478
G W R QMGRGLPSHSLR SSMGSMSLPSL ARNTLLHSSPGDLSFSPVRYTAPR
Sbjct: 330 GAGRWRRPAA*QMGRGLPSHSLRHSSMGSMSLPSLSARNTLLHSSPGDLSFSPVRYTAPR 151
Query: 477 SWRMKRYSGYDRLSLILLAIGAAPVSKAT 391
SWRMKRYSGYDRLSLILL IGA PVS AT
Sbjct: 150 SWRMKRYSGYDRLSLILLPIGAVPVSNAT 64
Score = 132 bits (282), Expect(3) = 4e-032
Identities = 65/99 (65%), Positives = 67/99 (67%)
Frame = -1 / -3
Query: 625 ADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQRVR 446
ADGQGLAVPLLEA+EHGVDELALAE QEH GQVHGAEVLADEAVQRVR
Sbjct: 298 ADGQGLAVPLLEALEHGVDELALAERQEHLVALLAGGLELLAGQVHGAEVLADEAVQRVR 119
Query: 445 PALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDL 329
PA+LDPV DRR GQRL LLEPVDL
Sbjct: 118 PAVLDPVADRRRARLERHAGGLHLPGQRLP*RLLEPVDL 2
Score = 36.3 bits (73), Expect(3) = 3e-068
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +2 / +2
Query: 662 EEEMTPYAREEEIKKGVFRYSQAGFISFAI* 754
EEE+TPY E K+G GFISFAI*
Sbjct: 353 EEEITPYRMRERNKEGSIFQYSQGFISFAI* 445
Score = 32.2 bits (64), Expect(3) = 3e-068
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2 / +2
Query: 761 LYVVPLYSSFLFGACSSDRVNVYSVCCSWLSHLQYVL 871
LYVV L SSF S V+ +CCS+L+ + +
Sbjct: 461 LYVVVLCSSFFCDCSSDPCKRVFCLCCSYLAAMSLAM 571
Score = 31.8 bits (63), Expect(4) = 4e-049
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 843 EQQTEYTFTRSLLQAPNKKDEYRGTTYND 757
EQQ + T L KKDE+R TTYN+
Sbjct: 543 EQQRQNTRLHGSLLQSQKKDEHRTTTYNN 457
Score = 23.1 bits (44), Expect(3) = 4e-032
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1 / -3
Query: 757 SSDRKRYEACLRIPKYSLLYFFLARIRCHLLL 662
+S+RKR EA + F +RC LLL
Sbjct: 448 TSNRKRNEALRILKNTPFFIPFSHTVRCDLLL 353
Score = 22.6 bits (43), Expect(4) = 4e-049
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 715 KYSLLYFFLA 686
KYSLLY FLA
Sbjct: 407 KYSLLYSFLA 378
Score = 22.6 bits (43), Expect(3) = 4e-032
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3 / -1
Query: 845 KNNRQNTRLHDHCYKLQTK 789
+ RQNTRLH + Q K
Sbjct: 543 EQQRQNTRLHGSLLQSQKK 487
Score = 22.1 bits (42), Expect(4) = 4e-049
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / -1
Query: 756 LQIANDMKP 730
LQIAN+MKP
Sbjct: 447 LQIANEMKP 421
>gb|CN138952.1|CN138952 OX1_15_D09.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_15_D09_A002 3', mRNA sequence
Length = 750
Score = 195 bits (420), Expect(2) = 1e-067
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +2 / +3
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 141 DAEREPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 320
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LG V+LTGEKLKSPGEEC KVF +++GKL+DPML+CLKEWDGKPLPI
Sbjct: 321 LGCVFLTGEKLKSPGEECTKVFNGINQGKLVDPMLECLKEWDGKPLPI 464
Score = 124 bits (265), Expect = 2e-027
Identities = 65/131 (49%), Positives = 73/131 (55%)
Frame = -2 / -3
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MG GLPSHSLR SS+GS SLP L NTL+HSSPGDLSFSPVR T P S R KRYSG DR
Sbjct: 463 MGSGLPSHSLRHSSIGSTSLPWLMPLNTLVHSSPGDLSFSPVRNTQPSSSRTKRYSGNDR 284
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LS I A GA P + AT LENT+ S S + ST+
Sbjct: 283 LSAIRFATGAVPSATATRAASTSRGSTARSSSSNLVILENTEGSRSASPLLSAWSTSTAR 104
Query: 261 ARIFFIRGELA 229
+ + R LA
Sbjct: 103 SFVISGRLALA 71
Score = 83.5 bits (176), Expect(2) = 1e-067
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +2 / +3
Query: 155 RFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDAS 313
RFSEK L+TAIDRE V+ Y +DP SA+ PLM K+RAVLVDHA SG+AE++ S
Sbjct: 3 RFSEKELITAIDREGVFTYAEDPASASLPLMTKLRAVLVDHALSSGDAEREPS 161
Score = 81.7 bits (172), Expect(3) = 1e-029
Identities = 38/71 (53%), Positives = 43/71 (60%)
Frame = -1 / -2
Query: 637 VASSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAV 458
+ DGQ LAVPLLEA+ H VDELAL + EH Q H AE+LADEAV
Sbjct: 479 LVDDVDGQRLAVPLLEAL*HRVDELALVDAVEHLGALLAGGLELLARQEHAAELLADEAV 300
Query: 457 QRVRPALLDPV 425
QR RPA+ DPV
Sbjct: 299 QRERPAVRDPV 267
Score = 69.8 bits (146), Expect(3) = 1e-029
Identities = 35/51 (68%), Positives = 36/51 (70%)
Frame = -2 / -3
Query: 306 SFSASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKR 154
S SASPL AWSTSTAR F I G LAL GSS Y T SRSMAV +FSL R
Sbjct: 154 SRSASPLLSAWSTSTARSFVISGRLALAGSSAYVNTPSRSMAVMSSFSLNR 2
Score = 21.7 bits (41), Expect(3) = 1e-029
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / -2
Query: 367 QRLAQLLLEPVDLGE 323
Q A+LLLE DLGE
Sbjct: 209 QHRAELLLELGDLGE 165
>gb|CW460986.1|CW460986 fsbb001f208h04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f208h04, DNA
sequence
Length = 698
Score = 257 bits (555), Expect = 2e-067
Identities = 105/155 (67%), Positives = 128/155 (82%)
Frame = +2 / +3
Query: 164 EKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASASVFSKINRF 343
EK LLTAIDREAV+ Y DDPCSAN PLM+K+R+VLV+HA +GEAE+D SVF+K+ F
Sbjct: 3 EKDLLTAIDREAVFAYADDPCSANYPLMQKMRSVLVEHALANGEAERDPETSVFAKVATF 182
Query: 344 EEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSPG 523
EEELR ALPRE++AAR A E G A + NRI E RSYPLYRF+R++LG YLTGEK +SPG
Sbjct: 183 EEELRAALPREVDAARAAVENGTAAVPNRIAECRSYPLYRFVREELGTEYLTGEKTRSPG 362
Query: 524 EECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC* 628
EE NKVF+A++ GK ID +L+CLKEW+G+PLPIC*
Sbjct: 363 EEVNKVFVAMNLGKHIDAVLECLKEWNGEPLPIC* 467
Score = 172 bits (370), Expect = 7e-042
Identities = 87/155 (56%), Positives = 91/155 (58%)
Frame = -2 / -2
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQ+GRG P HSLR SS SM LP A NTL SSPGDL FSPVRY+ P S R YSGY
Sbjct: 466 QQIGRGSPFHSLRHSSTASMCLPRFIATNTLFTSSPGDLVFSPVRYSVPSSSRTNLYSGY 287
Query: 447 DRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWST 268
DR S IL A P S A L NTD S SASPL A ST
Sbjct: 286 DRHSAILFGTAAVPFSTAARAASTSRGSAARSSSSNVATLANTDVSGSRSASPLASACST 107
Query: 267 STARIFFIRGELALQGSS*YPYTASRSMAVSRAFS 163
ST RIF I G LALQGSS Y TASRS+AVSR+FS
Sbjct: 106 STDRIFCISG*LALQGSSAYANTASRSIAVSRSFS 2
>gb|BE359207.1|BE359207 DG1_39_C05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 393
Score = 252 bits (544), Expect = 7e-066
Identities = 106/114 (92%), Positives = 108/114 (94%)
Frame = +2 / +2
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
EKDASASVFSKINRFEE LREALPREMEAARVAFETG API NRIK+SRSYPLYRFIRQD
Sbjct: 2 EKDASASVFSKINRFEEALREALPREMEAARVAFETGTAPIGNRIKDSRSYPLYRFIRQD 181
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC*GRHR 640
LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPML+CLKEWDGKPLPIC* R
Sbjct: 182 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLECLKEWDGKPLPIC*AAGR 343
Score = 191 bits (411), Expect = 2e-047
Identities = 86/120 (71%), Positives = 86/120 (71%)
Frame = -2 / -1
Query: 657 GLASWHRWRPQQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPR 478
G W R QMGRGLPSHSLR SSMGSMSLPSL ARNTLLHSSPGDLSFSPVRYTAPR
Sbjct: 360 GAGRWRRPAA*QMGRGLPSHSLRHSSMGSMSLPSLSARNTLLHSSPGDLSFSPVRYTAPR 181
Query: 477 SWRMKRYSGYDRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFS 298
SWRMKRYSGYDRLSLILL IGA PVS AT LE TDALASFS
Sbjct: 180 SWRMKRYSGYDRLSLILLPIGAVPVSNATRAASISLGSASLSASSNLLILEKTDALASFS 1
Score = 137 bits (293), Expect = 3e-031
Identities = 67/101 (66%), Positives = 69/101 (68%)
Frame = -1 / -3
Query: 625 ADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQRVR 446
ADGQGLAVPLLEA+EHGVDELALAE QEH GQVHGAEVLADEAVQRVR
Sbjct: 328 ADGQGLAVPLLEALEHGVDELALAERQEHLVALLAGGLELLAGQVHGAEVLADEAVQRVR 149
Query: 445 PALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
PA+LDPV DRR GQRL LLEPVDLGE
Sbjct: 148 PAVLDPVADRRRARLERHAGGLHLPGQRLP*RLLEPVDLGE 26
>gb|BE358841.1|BE358841 DG1_32_D06.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 627
Score = 245 bits (529), Expect = 8e-064
Identities = 100/148 (67%), Positives = 122/148 (82%)
Frame = +2 / +1
Query: 185 IDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASASVFSKINRFEEELREA 364
I+REAV+ Y DDPCSAN PLMKK+R VLV+ A +G AE DA SVF+K+ +FEEELR A
Sbjct: 1 IEREAVFAYADDPCSANYPLMKKLRNVLVERALANGAAEFDAETSVFAKVAQFEEELRAA 180
Query: 365 LPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSPGEECNKVF 544
LP+ +EAAR A E G A I NRI E RSYPLYRF+RQ++GAVYLTGEK +SPGEE NKV
Sbjct: 181 LPKAVEAARAAVENGTAAIPNRITECRSYPLYRFVRQEVGAVYLTGEKTRSPGEELNKVL 360
Query: 545 LALSEGKLIDPMLDCLKEWDGKPLPIC* 628
+A+++GK IDP+L+CLKEW+G+PLPIC*
Sbjct: 361 VAINQGKHIDPLLECLKEWNGEPLPIC* 444
Score = 155 bits (334), Expect = 7e-037
Identities = 81/147 (55%), Positives = 87/147 (59%)
Frame = -2 / -2
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQMG G P HSLR SS GSM P L A +TLL SSPG+ FSPVR TAP SWR KR SG
Sbjct: 443 QQMGSGSPFHSLRHSSSGSMCFPWLMATSTLLSSSPGERVFSPVR*TAPTSWRTKR*SG* 264
Query: 447 DRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWST 268
+R S+ILL I A P S A L TD AS SA+PL A ST
Sbjct: 263 ERHSVILLGIAAVPFSTAARAASTALGSAARSSSSNWATLAKTDVSASNSAAPLARARST 84
Query: 267 STARIFFIRGELALQGSS*YPYTASRS 187
ST R FF+ G LALQGSS Y TASRS
Sbjct: 83 STLRSFFMSG*LALQGSSAYANTASRS 3
>gb|BE918444.1|BE918444 OV1_3_G09.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 629
Score = 245 bits (529), Expect = 8e-064
Identities = 100/148 (67%), Positives = 122/148 (82%)
Frame = +2 / +2
Query: 185 IDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASASVFSKINRFEEELREA 364
I+REAV+ Y DDPCSAN PLMKK+R VLV+ A +G AE DA SVF+K+ +FEEELR A
Sbjct: 8 IEREAVFAYADDPCSANYPLMKKLRNVLVERALANGAAEFDAETSVFAKVAQFEEELRAA 187
Query: 365 LPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSPGEECNKVF 544
LP+ +EAAR A E G A I NRI E RSYPLYRF+RQ++GAVYLTGEK +SPGEE NKV
Sbjct: 188 LPKAVEAARAAVENGTAAIPNRITECRSYPLYRFVRQEVGAVYLTGEKTRSPGEELNKVL 367
Query: 545 LALSEGKLIDPMLDCLKEWDGKPLPIC* 628
+A+++GK IDP+L+CLKEW+G+PLPIC*
Sbjct: 368 VAINQGKHIDPLLECLKEWNGEPLPIC* 451
Score = 156 bits (336), Expect = 4e-037
Identities = 81/149 (54%), Positives = 89/149 (59%)
Frame = -2 / -3
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQMG G P HSLR SS GSM P L A +TLL SSPG+ FSPVR TAP SWR KR SG
Sbjct: 450 QQMGSGSPFHSLRHSSSGSMCFPWLMATSTLLSSSPGERVFSPVR*TAPTSWRTKR*SG* 271
Query: 447 DRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWST 268
+R S+ILL I A P S A L TD AS SA+PL A ST
Sbjct: 270 ERHSVILLGIAAVPFSTAARAASTALGSAARSSSSNWATLAKTDVSASNSAAPLARARST 91
Query: 267 STARIFFIRGELALQGSS*YPYTASRSMA 181
ST R FF+ G LALQGSS Y TASRS++
Sbjct: 90 STLRSFFMSG*LALQGSSAYANTASRSIS 4
>gb|BE358732.1|BE358732 DG1_31_D02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 619
Score = 195 bits (420), Expect(2) = 1e-063
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +2 / +1
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 115 DAEREPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 294
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LG V+LTGEKLKSPGEEC KVF +++GKL+DPML+CLKEWDGKPLPI
Sbjct: 295 LGCVFLTGEKLKSPGEECTKVFNGINQGKLVDPMLECLKEWDGKPLPI 438
Score = 124 bits (265), Expect = 2e-027
Identities = 65/131 (49%), Positives = 73/131 (55%)
Frame = -2 / -3
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MG GLPSHSLR SS+GS SLP L NTL+HSSPGDLSFSPVR T P S R KRYSG DR
Sbjct: 437 MGSGLPSHSLRHSSIGSTSLPWLMPLNTLVHSSPGDLSFSPVRNTQPSSSRTKRYSGNDR 258
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LS I A GA P + AT LENT+ S S + ST+
Sbjct: 257 LSAIRFATGAVPSATATRAASTSRGSTARSSSSNLVILENTEGSRSASPLLSAWSTSTAR 78
Query: 261 ARIFFIRGELA 229
+ + R LA
Sbjct: 77 SFVISGRLALA 45
Score = 81.7 bits (172), Expect(3) = 7e-027
Identities = 38/71 (53%), Positives = 43/71 (60%)
Frame = -1 / -2
Query: 637 VASSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAV 458
+ DGQ LAVPLLEA+ H VDELAL + EH Q H AE+LADEAV
Sbjct: 453 LVDDVDGQRLAVPLLEAL*HRVDELALVDAVEHLGALLAGGLELLARQEHAAELLADEAV 274
Query: 457 QRVRPALLDPV 425
QR RPA+ DPV
Sbjct: 273 QRERPAVRDPV 241
Score = 69.8 bits (146), Expect(2) = 1e-063
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = +2 / +1
Query: 179 TAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDAS 313
TAIDRE V+ Y +DP SA+ PLM K+RAVLVDHA SG+AE++ S
Sbjct: 1 TAIDREGVFTYAEDPASASLPLMTKLRAVLVDHALSSGDAEREPS 135
Score = 59.7 bits (124), Expect(3) = 7e-027
Identities = 30/42 (71%), Positives = 30/42 (71%)
Frame = -2 / -3
Query: 306 SFSASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMA 181
S SASPL AWSTSTAR F I G LAL GSS Y T SRSMA
Sbjct: 128 SRSASPLLSAWSTSTARSFVISGRLALAGSSAYVNTPSRSMA 3
Score = 21.7 bits (41), Expect(3) = 7e-027
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / -2
Query: 367 QRLAQLLLEPVDLGE 323
Q A+LLLE DLGE
Sbjct: 183 QHRAELLLELGDLGE 139
>gb|BG487962.1|BG487962 RHIZ2_61_D12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 693
Score = 244 bits (527), Expect = 2e-063
Identities = 100/148 (67%), Positives = 121/148 (81%)
Frame = +2 / +3
Query: 185 IDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASASVFSKINRFEEELREA 364
I+REAV+ Y DDPCSAN PLMKK+R VLV+ A +G AE DA SVF+K+ FEEELR A
Sbjct: 3 IEREAVFAYADDPCSANYPLMKKLRNVLVERALANGAAEFDAETSVFAKVAHFEEELRAA 182
Query: 365 LPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSPGEECNKVF 544
LP+ +EAAR A E G A I NRI E RSYPLYRF+RQ++GAVYLTGEK +SPGEE NKV
Sbjct: 183 LPKAVEAARAAVENGTAAIPNRITECRSYPLYRFVRQEVGAVYLTGEKTRSPGEELNKVL 362
Query: 545 LALSEGKLIDPMLDCLKEWDGKPLPIC* 628
+A+++GK IDP+L+CLKEW+G+PLPIC*
Sbjct: 363 VAINKGKHIDPLLECLKEWNGEPLPIC* 446
Score = 156 bits (336), Expect = 4e-037
Identities = 81/148 (54%), Positives = 88/148 (59%)
Frame = -2 / -3
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQMG G P HSLR SS GSM P L A +TLL SSPG+ FSPVR TAP SWR KR SG
Sbjct: 445 QQMGSGSPFHSLRHSSSGSMCFPLLMATSTLLSSSPGERVFSPVR*TAPTSWRTKR*SG* 266
Query: 447 DRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWST 268
+R S+ILL I A P S A L TD AS SA+PL A ST
Sbjct: 265 ERHSVILLGIAAVPFSTAARAASTALGSAARSSSSKWATLAKTDVSASNSAAPLARARST 86
Query: 267 STARIFFIRGELALQGSS*YPYTASRSM 184
ST R FF+ G LALQGSS Y TASRS+
Sbjct: 85 STLRSFFMSG*LALQGSSAYANTASRSI 2
>gb|CN129246.1|CN129246 RHOH1_34_G08.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_G08_A002 3', mRNA sequence
Length = 728
Score = 195 bits (420), Expect(2) = 2e-063
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +2 / +2
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 113 DAERDPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 292
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LG V+LTGEKLKSPGEEC KVF +++GKL+DPML+CLKEWDGKPLPI
Sbjct: 293 LGCVFLTGEKLKSPGEECTKVFNGINQGKLVDPMLECLKEWDGKPLPI 436
Score = 124 bits (265), Expect = 2e-027
Identities = 65/131 (49%), Positives = 73/131 (55%)
Frame = -2 / -3
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MG GLPSHSLR SS+GS SLP L NTL+HSSPGDLSFSPVR T P S R KRYSG DR
Sbjct: 435 MGSGLPSHSLRHSSIGSTSLPWLMPLNTLVHSSPGDLSFSPVRNTQPSSSRTKRYSGNDR 256
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LS I A GA P + AT LENT+ S S + ST+
Sbjct: 255 LSAIRFATGAVPSATATRAASTSRGSTARSSSSNLVILENTEGSRSASPLLSAWSTSTAR 76
Query: 261 ARIFFIRGELA 229
+ + R LA
Sbjct: 75 SFVISGRLALA 43
Score = 81.7 bits (172), Expect(3) = 1e-026
Identities = 38/71 (53%), Positives = 43/71 (60%)
Frame = -1 / -2
Query: 637 VASSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAV 458
+ DGQ LAVPLLEA+ H VDELAL + EH Q H AE+LADEAV
Sbjct: 451 LVDDVDGQRLAVPLLEAL*HRVDELALVDAVEHLGALLAGGLELLARQEHAAELLADEAV 272
Query: 457 QRVRPALLDPV 425
QR RPA+ DPV
Sbjct: 271 QRERPAVRDPV 239
Score = 69.3 bits (145), Expect(2) = 2e-063
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +2 / +2
Query: 182 AIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDAS 313
AIDRE V+ Y +DP SA+ PLM K+RAVLVDHA SG+AE+D S
Sbjct: 2 AIDREGVFTYAEDPASASLPLMTKLRAVLVDHALSSGDAERDPS 133
Score = 59.7 bits (124), Expect(3) = 1e-026
Identities = 30/42 (71%), Positives = 30/42 (71%)
Frame = -2 / -3
Query: 306 SFSASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMA 181
S SASPL AWSTSTAR F I G LAL GSS Y T SRSMA
Sbjct: 126 SRSASPLLSAWSTSTARSFVISGRLALAGSSAYVNTPSRSMA 1
Score = 21.7 bits (41), Expect(3) = 1e-026
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / -2
Query: 367 QRLAQLLLEPVDLGE 323
Q A+LLLE DLGE
Sbjct: 181 QHRAELLLELGDLGE 137
>gb|CW220801.1|CW220801 104_655_11197555_116_37153_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197555, DNA
sequence
Length = 642
Score = 160 bits (345), Expect(2) = 2e-063
Identities = 64/95 (67%), Positives = 79/95 (83%)
Frame = +2 / -2
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 287 DAEREPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 108
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPML 583
LG V+LTGEKLKSPGEEC KVF +++GKL+DPML
Sbjct: 107 LGCVFLTGEKLKSPGEECTKVFNGINQGKLVDPML 3
Score = 103 bits (220), Expect(2) = 2e-063
Identities = 45/69 (65%), Positives = 55/69 (79%)
Frame = +2 / -2
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
A+KVLT + GDL SARFSEK L+TAIDRE V+ Y +DP SA+ PLM K+RAVLVDHA
Sbjct: 473 AKKVLTMNPSGDLSSARFSEKELITAIDREGVFTYAEDPASASLPLMTKLRAVLVDHALS 294
Query: 287 SGEAEKDAS 313
SG+AE++ S
Sbjct: 293 SGDAEREPS 267
Score = 89.0 bits (188), Expect(3) = 8e-029
Identities = 45/67 (67%), Positives = 47/67 (70%)
Frame = -2 / +1
Query: 306 SFSASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRL 127
S SASPL AWSTSTAR F I G LAL GSS Y T SRSMAV +FSL RAL RSP
Sbjct: 274 SRSASPLLSAWSTSTARSFVISGRLALAGSSAYVNTPSRSMAVMSSFSLNRALERSPDGF 453
Query: 126 VVSTFLA 106
+VSTF A
Sbjct: 454 MVSTFFA 474
Score = 59.3 bits (123), Expect(3) = 8e-029
Identities = 27/52 (51%), Positives = 30/52 (57%)
Frame = -1 / +3
Query: 580 HGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQRVRPALLDPV 425
H VDELAL + EH Q H AE+LADEAVQR RPA+ DPV
Sbjct: 6 HRVDELALVDAVEHLGALLAGGLELLARQEHAAELLADEAVQRERPAVRDPV 161
Score = 21.7 bits (41), Expect(3) = 8e-029
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / +3
Query: 367 QRLAQLLLEPVDLGE 323
Q A+LLLE DLGE
Sbjct: 219 QHRAELLLELGDLGE 263
>gb|BE355038.1|BE355038 DG1_10_B12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 626
Score = 195 bits (420), Expect(2) = 2e-062
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +2 / +2
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 110 DAEREPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 289
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LG V+LTGEKLKSPGEEC KVF +++GKL+DPML+CLKEWDGKPLPI
Sbjct: 290 LGCVFLTGEKLKSPGEECTKVFNGINQGKLVDPMLECLKEWDGKPLPI 433
Score = 124 bits (265), Expect = 2e-027
Identities = 65/131 (49%), Positives = 73/131 (55%)
Frame = -2 / -3
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MG GLPSHSLR SS+GS SLP L NTL+HSSPGDLSFSPVR T P S R KRYSG DR
Sbjct: 432 MGSGLPSHSLRHSSIGSTSLPWLMPLNTLVHSSPGDLSFSPVRNTQPSSSRTKRYSGNDR 253
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LS I A GA P + AT LENT+ S S + ST+
Sbjct: 252 LSAIRFATGAVPSATATRAASTSRGSTARSSSSNLVILENTEGSRSASPLLSAWSTSTAR 73
Query: 261 ARIFFIRGELA 229
+ + R LA
Sbjct: 72 SFVISGRLALA 40
Score = 81.7 bits (172), Expect(3) = 3e-026
Identities = 38/71 (53%), Positives = 43/71 (60%)
Frame = -1 / -2
Query: 637 VASSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAV 458
+ DGQ LAVPLLEA+ H VDELAL + EH Q H AE+LADEAV
Sbjct: 448 LVDDVDGQRLAVPLLEAL*HRVDELALVDAVEHLGALLAGGLELLARQEHAAELLADEAV 269
Query: 457 QRVRPALLDPV 425
QR RPA+ DPV
Sbjct: 268 QRERPAVRDPV 236
Score = 65.7 bits (137), Expect(2) = 2e-062
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = +2 / +2
Query: 185 IDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDAS 313
IDRE V+ Y +DP SA+ PLM K+RAVLVDHA SG+AE++ S
Sbjct: 2 IDREGVFTYAEDPASASLPLMTKLRAVLVDHALSSGDAEREPS 130
Score = 57.9 bits (120), Expect(3) = 3e-026
Identities = 29/41 (70%), Positives = 29/41 (70%)
Frame = -2 / -3
Query: 306 SFSASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSM 184
S SASPL AWSTSTAR F I G LAL GSS Y T SRSM
Sbjct: 123 SRSASPLLSAWSTSTARSFVISGRLALAGSSAYVNTPSRSM 1
Score = 21.7 bits (41), Expect(3) = 3e-026
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / -2
Query: 367 QRLAQLLLEPVDLGE 323
Q A+LLLE DLGE
Sbjct: 178 QHRAELLLELGDLGE 134
>gb|BE360494.1|BE360494 DG1_63_B03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 517
Score = 240 bits (518), Expect = 3e-062
Identities = 98/145 (67%), Positives = 119/145 (82%)
Frame = +2 / +1
Query: 194 EAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASASVFSKINRFEEELREALPR 373
EAV+ Y DDPCSAN PLMKK+R VLV+ A +G AE DA SVF+K+ +FEEELR ALP+
Sbjct: 1 EAVFAYADDPCSANYPLMKKLRNVLVERALANGAAEFDAETSVFAKVAQFEEELRAALPK 180
Query: 374 EMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSPGEECNKVFLAL 553
+EAAR A E G A I NRI E RSYPLYRF+RQ++GAVYLTGEK +SPGEE NKV +A+
Sbjct: 181 AVEAARAAVENGTAAIPNRITECRSYPLYRFVRQEVGAVYLTGEKTRSPGEELNKVLVAI 360
Query: 554 SEGKLIDPMLDCLKEWDGKPLPIC* 628
++GK IDP+L+CLKEW+G+PLPIC*
Sbjct: 361 NQGKHIDPLLECLKEWNGEPLPIC* 435
Score = 149 bits (321), Expect = 4e-035
Identities = 78/144 (54%), Positives = 84/144 (58%)
Frame = -2 / -3
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQMG G P HSLR SS GSM P L A +TLL SSPG+ FSPVR TAP SWR KR SG
Sbjct: 434 QQMGSGSPFHSLRHSSSGSMCFPWLMATSTLLSSSPGERVFSPVR*TAPTSWRTKR*SG* 255
Query: 447 DRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWST 268
+R S+ILL I A P S A L TD AS SA+PL A ST
Sbjct: 254 ERHSVILLGIAAVPFSTAARAASTALGSAARSSSSNWATLAKTDVSASNSAAPLARARST 75
Query: 267 STARIFFIRGELALQGSS*YPYTA 196
ST R FF+ G LALQGSS Y TA
Sbjct: 74 STLRSFFMSG*LALQGSSAYANTA 3
>gb|BG101760.1|BG101760 RHIZ2_21_A04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 525
Score = 236 bits (510), Expect = 4e-061
Identities = 91/150 (60%), Positives = 123/150 (82%)
Frame = +2 / +3
Query: 179 TAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASASVFSKINRFEEELR 358
TAIDREAV+ Y DDPCS N PLM+K+RAVL++HA +G+AE+ S+F+K+ FE+++R
Sbjct: 6 TAIDREAVFAYADDPCSPNYPLMQKLRAVLIEHALANGDAERVVETSIFAKVAEFEQQVR 185
Query: 359 EALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSPGEECNK 538
ALP+E+EAAR A E+G + NRIKE RSYPLYRF+R+++G YLTGEK +SPGEE NK
Sbjct: 186 AALPKEVEAARAAVESGNPLVPNRIKECRSYPLYRFVREEVGTQYLTGEKTRSPGEELNK 365
Query: 539 VFLALSEGKLIDPMLDCLKEWDGKPLPIC* 628
V +A+++ K IDP+L+CLKEW+G+PLP+C*
Sbjct: 366 VLVAINQRKHIDPLLECLKEWNGEPLPLC* 455
Score = 141 bits (303), Expect = 1e-032
Identities = 77/150 (51%), Positives = 81/150 (54%)
Frame = -2 / -3
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQ G G P HSLR SS GSM L L A +TL SSPGDL FSPVRY P S R RYSG
Sbjct: 454 QQSGSGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYWVPTSSRTNRYSG* 275
Query: 447 DRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWST 268
DR SLILL P+S A L D + SASPL A S
Sbjct: 274 DRHSLILLGTRGLPLSTAARAASTSLGSAARTCCSNSATLAKMDVSTTRSASPLASACSI 95
Query: 267 STARIFFIRGELALQGSS*YPYTASRSMAV 178
STAR F I G L L GSS Y TASRS+AV
Sbjct: 94 STARSFCISG*LGLHGSSAYANTASRSIAV 5
>gb|BG932930.1|BG932930 DG1_69_B03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 689
Score = 195 bits (420), Expect(2) = 6e-061
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +2 / +1
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 103 DAEREPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 282
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LG V+LTGEKLKSPGEEC KVF +++GKL+DPML+CLKEWDGKPLPI
Sbjct: 283 LGCVFLTGEKLKSPGEECTKVFNGINQGKLVDPMLECLKEWDGKPLPI 426
Score = 124 bits (265), Expect = 2e-027
Identities = 65/131 (49%), Positives = 73/131 (55%)
Frame = -2 / -1
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MG GLPSHSLR SS+GS SLP L NTL+HSSPGDLSFSPVR T P S R KRYSG DR
Sbjct: 425 MGSGLPSHSLRHSSIGSTSLPWLMPLNTLVHSSPGDLSFSPVRNTQPSSSRTKRYSGNDR 246
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LS I A GA P + AT LENT+ S S + ST+
Sbjct: 245 LSAIRFATGAVPSATATRAASTSRGSTARSSSSNLVILENTEGSRSASPLLSAWSTSTAR 66
Query: 261 ARIFFIRGELA 229
+ + R LA
Sbjct: 65 SFVISGRLALA 33
Score = 81.7 bits (172), Expect(3) = 2e-024
Identities = 38/71 (53%), Positives = 43/71 (60%)
Frame = -1 / -3
Query: 637 VASSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAV 458
+ DGQ LAVPLLEA+ H VDELAL + EH Q H AE+LADEAV
Sbjct: 441 LVDDVDGQRLAVPLLEAL*HRVDELALVDAVEHLGALLAGGLELLARQEHAAELLADEAV 262
Query: 457 QRVRPALLDPV 425
QR RPA+ DPV
Sbjct: 261 QRERPAVRDPV 229
Score = 61.1 bits (127), Expect(2) = 6e-061
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +2 / +1
Query: 191 REAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDAS 313
RE V+ Y +DP SA+ PLM K+RAVLVDHA SG+AE++ S
Sbjct: 1 REGVFTYAEDPASASLPLMTKLRAVLVDHALSSGDAEREPS 123
Score = 51.5 bits (106), Expect(3) = 2e-024
Identities = 26/38 (68%), Positives = 26/38 (68%)
Frame = -2 / -1
Query: 306 SFSASPLGGAWSTSTARIFFIRGELALQGSS*YPYTAS 193
S SASPL AWSTSTAR F I G LAL GSS Y T S
Sbjct: 116 SRSASPLLSAWSTSTARSFVISGRLALAGSSAYVNTPS 3
Score = 21.7 bits (41), Expect(3) = 2e-024
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / -3
Query: 367 QRLAQLLLEPVDLGE 323
Q A+LLLE DLGE
Sbjct: 171 QHRAELLLELGDLGE 127
>gb|CW246218.1|CW246218 104_707_11221250_116_35083_013 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221250, DNA
sequence
Length = 666
Score = 229 bits (494), Expect(2) = 1e-059
Identities = 98/153 (64%), Positives = 119/153 (77%)
Frame = +2 / -3
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
A+K L+T+ G LH ARF EK LL I+REAV+ Y DDPCSAN PLMKK+R VLV+ A
Sbjct: 460 AKKTLSTNSTGGLHVARFCEKDLLQEIEREAVFAYADDPCSANYPLMKKLRNVLVERALA 281
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G AE DA SVF+K+ +FEEELR ALP+ +EAAR A E G A I NRI E RSYPLYRF
Sbjct: 280 NGAAEFDAETSVFAKVAQFEEELRAALPKAVEAARAAVENGTAAIPNRITECRSYPLYRF 101
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGK 565
+RQ++GAVYLTGEK +SPGEE NKV +A+++GK
Sbjct: 100 VRQEVGAVYLTGEKTRSPGEELNKVLVAINQGK 2
Score = 154 bits (331), Expect = 2e-036
Identities = 80/152 (52%), Positives = 90/152 (59%)
Frame = -2 / +3
Query: 561 PSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDRLSLILLAIGAAPVSKATXXX 382
P L A +TLL SSPG+ FSPVR TAP SWR KR SG +R S+ILL I A P S A
Sbjct: 6 PWLMATSTLLSSSPGERVFSPVR*TAPTSWRTKR*SG*ERHSVILLGIAAVPFSTAARAA 185
Query: 381 XXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTSTARIFFIRGELALQGSS*YPY 202
L TD AS SA+PL A STST R FF+ G LALQGSS Y
Sbjct: 186 STALGSAARSSSSNWATLAKTDVSASNSAAPLARARSTSTLRSFFMSG*LALQGSSAYAN 365
Query: 201 TASRSMAVSRAFSLKRALWRSPPRLVVSTFLA 106
TASRS++ SR+FS KRA WR P LV+ F A
Sbjct: 366 TASRSISWSRSFSQKRATWRPPVELVLRVFFA 461
Score = 22.6 bits (43), Expect(2) = 1e-059
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +1 / -3
Query: 58 HLEENLKSAARA 93
H+EEN+KSA ++
Sbjct: 511 HIEENVKSAVKS 476
>gb|BE355461.1|BE355461 DG1_114_C11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 652
Score = 195 bits (420), Expect(2) = 1e-059
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +2 / +2
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 95 DAEREPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 274
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LG V+LTGEKLKSPGEEC KVF +++GKL+DPML+CLKEWDGKPLPI
Sbjct: 275 LGCVFLTGEKLKSPGEECTKVFNGINQGKLVDPMLECLKEWDGKPLPI 418
Score = 124 bits (265), Expect = 2e-027
Identities = 65/131 (49%), Positives = 73/131 (55%)
Frame = -2 / -2
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MG GLPSHSLR SS+GS SLP L NTL+HSSPGDLSFSPVR T P S R KRYSG DR
Sbjct: 417 MGSGLPSHSLRHSSIGSTSLPWLMPLNTLVHSSPGDLSFSPVRNTQPSSSRTKRYSGNDR 238
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LS I A GA P + AT LENT+ S S + ST+
Sbjct: 237 LSAIRFATGAVPSATATRAASTSRGSTARSSSSNLVILENTEGSRSASPLLSAWSTSTAR 58
Query: 261 ARIFFIRGELA 229
+ + R LA
Sbjct: 57 SFVISGRLALA 25
Score = 81.3 bits (171), Expect(3) = 8e-024
Identities = 38/66 (57%), Positives = 42/66 (63%)
Frame = -1 / -1
Query: 622 DGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQRVRP 443
DGQ LAVPLLEA+ H VDELAL + EH Q H AE+LADEAVQR RP
Sbjct: 418 DGQRLAVPLLEAL*HRVDELALVDAVEHLGALLAGGLELLARQEHAAELLADEAVQRERP 239
Query: 442 ALLDPV 425
A+ DPV
Sbjct: 238 AVRDPV 221
Score = 56.5 bits (117), Expect(2) = 1e-059
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = +2 / +2
Query: 200 VYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDAS 313
V+ Y +DP SA+ PLM K+RAVLVDHA SG+AE++ S
Sbjct: 2 VFTYAEDPASASLPLMTKLRAVLVDHALSSGDAEREPS 115
Score = 50.1 bits (103), Expect(3) = 8e-024
Identities = 25/36 (69%), Positives = 25/36 (69%)
Frame = -2 / -2
Query: 306 SFSASPLGGAWSTSTARIFFIRGELALQGSS*YPYT 199
S SASPL AWSTSTAR F I G LAL GSS Y T
Sbjct: 108 SRSASPLLSAWSTSTARSFVISGRLALAGSSAYVNT 1
Score = 21.7 bits (41), Expect(3) = 8e-024
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / -1
Query: 367 QRLAQLLLEPVDLGE 323
Q A+LLLE DLGE
Sbjct: 163 QHRAELLLELGDLGE 119
>gb|CN125016.1|CN125016 RHOH1_8_H01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_8_H01_A002 3', mRNA sequence
Length = 735
Score = 195 bits (420), Expect(2) = 7e-059
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +2 / +1
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 85 DAEREPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 264
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LG V+LTGEKLKSPGEEC KVF +++GKL+DPML+CLKEWDGKPLPI
Sbjct: 265 LGCVFLTGEKLKSPGEECTKVFNGINQGKLVDPMLECLKEWDGKPLPI 408
Score = 124 bits (265), Expect = 2e-027
Identities = 65/131 (49%), Positives = 73/131 (55%)
Frame = -2 / -2
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MG GLPSHSLR SS+GS SLP L NTL+HSSPGDLSFSPVR T P S R KRYSG DR
Sbjct: 407 MGSGLPSHSLRHSSIGSTSLPWLMPLNTLVHSSPGDLSFSPVRNTQPSSSRTKRYSGNDR 228
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LS I A GA P + AT LENT+ S S + ST+
Sbjct: 227 LSAIRFATGAVPSATATRAASTSRGSTARSSSSNLVILENTEGSRSASPLLSAWSTSTAR 48
Query: 261 ARIFFIRGELA 229
+ + R LA
Sbjct: 47 SFVISGRLALA 15
Score = 81.3 bits (171), Expect(3) = 3e-023
Identities = 38/66 (57%), Positives = 42/66 (63%)
Frame = -1 / -1
Query: 622 DGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQRVRP 443
DGQ LAVPLLEA+ H VDELAL + EH Q H AE+LADEAVQR RP
Sbjct: 408 DGQRLAVPLLEAL*HRVDELALVDAVEHLGALLAGGLELLARQEHAAELLADEAVQRERP 229
Query: 442 ALLDPV 425
A+ DPV
Sbjct: 228 AVRDPV 211
Score = 54.2 bits (112), Expect(2) = 7e-059
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +2 / +1
Query: 209 YYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDAS 313
Y +DP SA+ PLM K+RAVLVDHA SG+AE++ S
Sbjct: 1 YAEDPASASLPLMTKLRAVLVDHALSSGDAEREPS 105
Score = 48.3 bits (99), Expect(3) = 3e-023
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 306 SFSASPLGGAWSTSTARIFFIRGELALQGSS 214
S SASPL AWSTSTAR F I G LAL GSS
Sbjct: 98 SRSASPLLSAWSTSTARSFVISGRLALAGSS 6
Score = 21.7 bits (41), Expect(3) = 3e-023
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / -1
Query: 367 QRLAQLLLEPVDLGE 323
Q A+LLLE DLGE
Sbjct: 153 QHRAELLLELGDLGE 109
>gb|CF072290.1|CF072290 FE1_7_F11.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_7_F11_A002 3', mRNA sequence
Length = 740
Score = 195 bits (420), Expect(2) = 3e-058
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +2 / +2
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 80 DAEREPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 259
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LG V+LTGEKLKSPGEEC KVF +++GKL+DPML+CLKEWDGKPLPI
Sbjct: 260 LGCVFLTGEKLKSPGEECTKVFNGINQGKLVDPMLECLKEWDGKPLPI 403
Score = 124 bits (265), Expect = 2e-027
Identities = 65/131 (49%), Positives = 73/131 (55%)
Frame = -2 / -3
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MG GLPSHSLR SS+GS SLP L NTL+HSSPGDLSFSPVR T P S R KRYSG DR
Sbjct: 402 MGSGLPSHSLRHSSIGSTSLPWLMPLNTLVHSSPGDLSFSPVRNTQPSSSRTKRYSGNDR 223
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LS I A GA P + AT LENT+ S S + ST+
Sbjct: 222 LSAIRFATGAVPSATATRAASTSRGSTARSSSSNLVILENTEGSRSASPLLSAWSTSTAR 43
Query: 261 ARIFFIRGELA 229
+ + R LA
Sbjct: 42 SFVISGRLALA 10
Score = 81.7 bits (172), Expect(3) = 2e-023
Identities = 38/71 (53%), Positives = 43/71 (60%)
Frame = -1 / -2
Query: 637 VASSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAV 458
+ DGQ LAVPLLEA+ H VDELAL + EH Q H AE+LADEAV
Sbjct: 418 LVDDVDGQRLAVPLLEAL*HRVDELALVDAVEHLGALLAGGLELLARQEHAAELLADEAV 239
Query: 457 QRVRPALLDPV 425
QR RPA+ DPV
Sbjct: 238 QRERPAVRDPV 206
Score = 51.9 bits (107), Expect(2) = 3e-058
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +2 / +2
Query: 215 DDPCSANSPLMKKIRAVLVDHAPPSGEAEKDAS 313
+DP SA+ PLM K+RAVLVDHA SG+AE++ S
Sbjct: 2 EDPASASLPLMTKLRAVLVDHALSSGDAEREPS 100
Score = 48.3 bits (99), Expect(3) = 2e-023
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -2 / -3
Query: 306 SFSASPLGGAWSTSTARIFFIRGELALQGSS 214
S SASPL AWSTSTAR F I G LAL GSS
Sbjct: 93 SRSASPLLSAWSTSTARSFVISGRLALAGSS 1
Score = 21.7 bits (41), Expect(3) = 2e-023
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / -2
Query: 367 QRLAQLLLEPVDLGE 323
Q A+LLLE DLGE
Sbjct: 148 QHRAELLLELGDLGE 104
>gb|CW436719.1|CW436719 fsbb001f153h11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f153h11, DNA
sequence
Length = 658
Score = 195 bits (420), Expect(2) = 3e-058
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +2 / -1
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 580 DAEREPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 401
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LG V+LTGEKLKSPGEEC KVF +++GKL+DPML+CLKEWDGKPLPI
Sbjct: 400 LGCVFLTGEKLKSPGEECTKVFNGINQGKLVDPMLECLKEWDGKPLPI 257
Score = 123 bits (264), Expect(2) = 4e-035
Identities = 60/108 (55%), Positives = 64/108 (59%)
Frame = -2 / +3
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MG GLPSHSLR SS+GS SLP L NTL+HSSPGDLSFSPVR T P S R KRYSG DR
Sbjct: 258 MGSGLPSHSLRHSSIGSTSLPWLMPLNTLVHSSPGDLSFSPVRNTQPSSSRTKRYSGNDR 437
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFS 298
LS I A GA P + AT LENT+ S S
Sbjct: 438 LSAIRFATGAVPSATATRAASTSRGSTARSSSSNLVILENTEGSRSAS 581
Score = 51.9 bits (107), Expect(2) = 3e-058
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +2 / -1
Query: 215 DDPCSANSPLMKKIRAVLVDHAPPSGEAEKDAS 313
+DP SA+ PLM K+RAVLVDHA SG+AE++ S
Sbjct: 658 EDPASASLPLMTKLRAVLVDHALSSGDAEREPS 560
Score = 46.0 bits (94), Expect(2) = 4e-035
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = -2 / +3
Query: 306 SFSASPLGGAWSTSTARIFFIRGELALQGS 217
S SASPL AWSTSTAR F I G LAL GS
Sbjct: 567 SRSASPLLSAWSTSTARNFVISGRLALAGS 656
>gb|CW220802.1|CW220802 104_655_11197555_148_37154_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197555, DNA
sequence
Length = 710
Score = 141 bits (303), Expect(2) = 1e-057
Identities = 57/82 (69%), Positives = 68/82 (82%)
Frame = +2 / +3
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 453 DAEREPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 632
Query: 479 LGAVYLTGEKLKSPGEECNKVF 544
LG V+LTGEKLKSPGEEC KVF
Sbjct: 633 LGCVFLTGEKLKSPGEECTKVF 698
Score = 103 bits (220), Expect(2) = 1e-057
Identities = 45/69 (65%), Positives = 55/69 (79%)
Frame = +2 / +3
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
A+KVLT + GDL SARFSEK L+TAIDRE V+ Y +DP SA+ PLM K+RAVLVDHA
Sbjct: 267 AKKVLTMNPSGDLSSARFSEKELITAIDREGVFTYAEDPASASLPLMTKLRAVLVDHALS 446
Query: 287 SGEAEKDAS 313
SG+AE++ S
Sbjct: 447 SGDAEREPS 473
Score = 89.0 bits (188), Expect(3) = 3e-024
Identities = 45/67 (67%), Positives = 47/67 (70%)
Frame = -2 / -2
Query: 306 SFSASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRL 127
S SASPL AWSTSTAR F I G LAL GSS Y T SRSMAV +FSL RAL RSP
Sbjct: 466 SRSASPLLSAWSTSTARSFVISGRLALAGSSAYVNTPSRSMAVMSSFSLNRALERSPDGF 287
Query: 126 VVSTFLA 106
+VSTF A
Sbjct: 286 MVSTFFA 266
Score = 44.1 bits (90), Expect(3) = 3e-024
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = -1 / -1
Query: 544 EHXXXXXXXXXXXXXGQVHGAEVLADEAVQRVRPALLDPV 425
EH Q H AE+LADEAVQR RPA+ DPV
Sbjct: 698 EHLGALLAGGLELLARQEHAAELLADEAVQRERPAVRDPV 579
Score = 21.7 bits (41), Expect(3) = 3e-024
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / -1
Query: 367 QRLAQLLLEPVDLGE 323
Q A+LLLE DLGE
Sbjct: 521 QHRAELLLELGDLGE 477
>gb|CW442302.1|CW442302 fsbb001f161o10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f161o10, DNA
sequence
Length = 459
Score = 224 bits (483), Expect = 2e-057
Identities = 97/149 (65%), Positives = 116/149 (77%)
Frame = +2 / -1
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
A+K L+T+ G LH ARF EKALL I+REAV+ Y DDPCSAN PLMKK+R VLV+ A
Sbjct: 447 AKKPLSTNSPGGLHVARFCEKALLQEIEREAVFAYADDPCSANYPLMKKLRNVLVERALA 268
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G AE DA SVF+K+ +FEEELR ALP+ +EAAR A ETG A I RI E RSYPLYRF
Sbjct: 267 TGAAEFDAETSVFAKVAQFEEELRAALPKAVEAARAAVETGTAAIPTRITECRSYPLYRF 88
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLAL 553
+RQ++GAVYLTGEK +SPGEE NKV +A+
Sbjct: 87 VRQEVGAVYLTGEKTRSPGEELNKVLVAI 1
Score = 151 bits (324), Expect = 2e-035
Identities = 78/148 (52%), Positives = 89/148 (60%)
Frame = -2 / +2
Query: 549 ARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDRLSLILLAIGAAPVSKATXXXXXXX 370
A +TLL SSPG+ FSPVR TAP SWR KR SG +R S+IL+ I A PVS A
Sbjct: 5 ATSTLLSSSPGERVFSPVR*TAPTSWRTKR*SG*ERHSVILVGIAAVPVSTAARAASTAL 184
Query: 369 XXXXXXXXXXXXXLENTDALASFSASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASR 190
L TD AS SA+P+ A STST R FF+ G LALQGSS Y TASR
Sbjct: 185 GSAARSSSSNWATLAKTDVSASNSAAPVARARSTSTLRSFFMSG*LALQGSSAYANTASR 364
Query: 189 SMAVSRAFSLKRALWRSPPRLVVSTFLA 106
S++ SRAFS KRA WR P LV+ F A
Sbjct: 365 SISWSRAFSQKRATWRPPGELVLRGFFA 448
>gb|BE361256.1|BE361256 DG1_70_D10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 343
Score = 221 bits (478), Expect = 9e-057
Identities = 92/100 (92%), Positives = 94/100 (94%)
Frame = +2 / +1
Query: 341 FEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSP 520
FEE LREALPREMEAARVAFETG API NRIK+SRSYPLYRFIRQDLGAVYLTGEKLKSP
Sbjct: 1 FEEALREALPREMEAARVAFETGTAPIGNRIKDSRSYPLYRFIRQDLGAVYLTGEKLKSP 180
Query: 521 GEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC*GRHR 640
GEECNKVFLALSEGKLIDPML+CLKEWDGKPLPIC* R
Sbjct: 181 GEECNKVFLALSEGKLIDPMLECLKEWDGKPLPIC*AAGR 300
Score = 176 bits (379), Expect = 4e-043
Identities = 76/89 (85%), Positives = 76/89 (85%)
Frame = -2 / -3
Query: 657 GLASWHRWRPQQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPR 478
G W R QMGRGLPSHSLR SSMGSMSLPSL ARNTLLHSSPGDLSFSPVRYTAPR
Sbjct: 317 GAGRWRRPAA*QMGRGLPSHSLRHSSMGSMSLPSLSARNTLLHSSPGDLSFSPVRYTAPR 138
Query: 477 SWRMKRYSGYDRLSLILLAIGAAPVSKAT 391
SWRMKRYSGYDRLSLILL IGA PVS AT
Sbjct: 137 SWRMKRYSGYDRLSLILLPIGAVPVSNAT 51
Score = 122 bits (261), Expect = 8e-027
Identities = 61/95 (64%), Positives = 63/95 (66%)
Frame = -1 / -2
Query: 625 ADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQRVR 446
ADGQGLAVPLLEA+EHGVDELALAE QEH GQVHGAEVLADEAVQRVR
Sbjct: 285 ADGQGLAVPLLEALEHGVDELALAERQEHLVALLAGGLELLAGQVHGAEVLADEAVQRVR 106
Query: 445 PALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLE 341
PA+LDPV DRR GQRL LLE
Sbjct: 105 PAVLDPVADRRRARLERHAGGLHLPGQRLP*RLLE 1
>gb|BE361202.1|BE361202 DG1_70_F03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 398
Score = 195 bits (420), Expect(2) = 4e-056
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +2 / +2
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 68 DAEREPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 247
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LG V+LTGEKLKSPGEEC KVF +++GKL+DPML+CLKEWDGKPLPI
Sbjct: 248 LGCVFLTGEKLKSPGEECTKVFNGINQGKLVDPMLECLKEWDGKPLPI 391
Score = 123 bits (264), Expect(2) = 5e-034
Identities = 60/108 (55%), Positives = 64/108 (59%)
Frame = -2 / -3
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MG GLPSHSLR SS+GS SLP L NTL+HSSPGDLSFSPVR T P S R KRYSG DR
Sbjct: 390 MGSGLPSHSLRHSSIGSTSLPWLMPLNTLVHSSPGDLSFSPVRNTQPSSSRTKRYSGNDR 211
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFS 298
LS I A GA P + AT LENT+ S S
Sbjct: 210 LSAIRFATGAVPSATATRAASTSRGSTARSSSSNLVILENTEGSRSAS 67
Score = 45.1 bits (92), Expect(2) = 4e-056
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2 / +2
Query: 227 SANSPLMKKIRAVLVDHAPPSGEAEKDAS 313
SA+ PLM K+RAVLVDHA SG+AE++ S
Sbjct: 2 SASLPLMTKLRAVLVDHALSSGDAEREPS 88
Score = 42.3 bits (86), Expect(2) = 5e-034
Identities = 20/27 (74%), Positives = 20/27 (74%)
Frame = -2 / -3
Query: 306 SFSASPLGGAWSTSTARIFFIRGELAL 226
S SASPL AWSTSTAR F I G LAL
Sbjct: 81 SRSASPLLSAWSTSTARSFVISGRLAL 1
>gb|BG239851.1|BG239851 OV1_29_G11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 659
Score = 195 bits (420), Expect(2) = 3e-055
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +2 / +3
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 57 DAEREPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 236
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LG V+LTGEKLKSPGEEC KVF +++GKL+DPML+CLKEWDGKPLPI
Sbjct: 237 LGCVFLTGEKLKSPGEECTKVFNGINQGKLVDPMLECLKEWDGKPLPI 380
Score = 123 bits (264), Expect(2) = 2e-032
Identities = 60/108 (55%), Positives = 64/108 (59%)
Frame = -2 / -2
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MG GLPSHSLR SS+GS SLP L NTL+HSSPGDLSFSPVR T P S R KRYSG DR
Sbjct: 379 MGSGLPSHSLRHSSIGSTSLPWLMPLNTLVHSSPGDLSFSPVRNTQPSSSRTKRYSGNDR 200
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFS 298
LS I A GA P + AT LENT+ S S
Sbjct: 199 LSAIRFATGAVPSATATRAASTSRGSTARSSSSNLVILENTEGSRSAS 56
Score = 41.8 bits (85), Expect(2) = 3e-055
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / +3
Query: 239 PLMKKIRAVLVDHAPPSGEAEKDAS 313
PLM K+RAVLVDHA SG+AE++ S
Sbjct: 3 PLMTKLRAVLVDHALSSGDAEREPS 77
Score = 36.8 bits (74), Expect(2) = 2e-032
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = -2 / -2
Query: 306 SFSASPLGGAWSTSTARIFFIRG 238
S SASPL AWSTSTAR F I G
Sbjct: 70 SRSASPLLSAWSTSTARSFVISG 2
>gb|BG103102.1|BG103102 RHIZ2_18_B11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 571
Score = 195 bits (420), Expect(2) = 3e-055
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +2 / +3
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 57 DAEREPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 236
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LG V+LTGEKLKSPGEEC KVF +++GKL+DPML+CLKEWDGKPLPI
Sbjct: 237 LGCVFLTGEKLKSPGEECTKVFNGINQGKLVDPMLECLKEWDGKPLPI 380
Score = 125 bits (268), Expect(2) = 7e-033
Identities = 61/108 (56%), Positives = 64/108 (59%)
Frame = -2 / -1
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MG GLPSHSLR SSMGS SLP L NTL+HSSPGDLSFSPVR T P S R KRYSG DR
Sbjct: 379 MGSGLPSHSLRHSSMGSTSLPWLMPLNTLVHSSPGDLSFSPVRNTQPSSSRTKRYSGNDR 200
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFS 298
LS I A GA P + AT LENT+ S S
Sbjct: 199 LSAIRFATGAVPSATATRAASTSRGSTARSSSSNLVILENTEGSRSAS 56
Score = 41.8 bits (85), Expect(2) = 3e-055
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / +3
Query: 239 PLMKKIRAVLVDHAPPSGEAEKDAS 313
PLM K+RAVLVDHA SG+AE++ S
Sbjct: 3 PLMTKLRAVLVDHALSSGDAEREPS 77
Score = 36.8 bits (74), Expect(2) = 7e-033
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = -2 / -1
Query: 306 SFSASPLGGAWSTSTARIFFIRG 238
S SASPL AWSTSTAR F I G
Sbjct: 70 SRSASPLLSAWSTSTARSFVISG 2
>gb|CD221354.1|CD221354 CCC1_54_F07.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_54_F07_A007 3', mRNA sequence
Length = 666
Score = 195 bits (420), Expect(2) = 3e-054
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +2 / +2
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 53 DAEREPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 232
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LG V+LTGEKLKSPGEEC KVF +++GKL+DPML+CLKEWDGKPLPI
Sbjct: 233 LGCVFLTGEKLKSPGEECTKVFNGINQGKLVDPMLECLKEWDGKPLPI 376
Score = 125 bits (268), Expect(2) = 3e-032
Identities = 61/108 (56%), Positives = 64/108 (59%)
Frame = -2 / -1
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MG GLPSHSLR SSMGS SLP L NTL+HSSPGDLSFSPVR T P S R KRYSG DR
Sbjct: 375 MGSGLPSHSLRHSSMGSTSLPWLMPLNTLVHSSPGDLSFSPVRNTQPSSSRTKRYSGNDR 196
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFS 298
LS I A GA P + AT LENT+ S S
Sbjct: 195 LSAIRFATGAVPSATATRAASTSRGSTARSSSSNLVILENTEGSRSAS 52
Score = 38.6 bits (78), Expect(2) = 3e-054
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +2 / +2
Query: 242 LMKKIRAVLVDHAPPSGEAEKDAS 313
LM K+RAVLVDHA SG+AE++ S
Sbjct: 2 LMTKLRAVLVDHALSSGDAEREPS 73
Score = 34.5 bits (69), Expect(2) = 3e-032
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = -2 / -1
Query: 306 SFSASPLGGAWSTSTARIFFI 244
S SASPL AWSTSTAR F I
Sbjct: 66 SRSASPLLSAWSTSTARSFVI 4
>gb|BE355327.1|BE355327 DG1_114_H09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 577
Score = 195 bits (420), Expect(2) = 4e-053
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +2 / +3
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 45 DAEREPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 224
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LG V+LTGEKLKSPGEEC KVF +++GKL+DPML+CLKEWDGKPLPI
Sbjct: 225 LGCVFLTGEKLKSPGEECTKVFNGINQGKLVDPMLECLKEWDGKPLPI 368
Score = 123 bits (264), Expect(2) = 3e-031
Identities = 60/108 (55%), Positives = 64/108 (59%)
Frame = -2 / -1
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MG GLPSHSLR SS+GS SLP L NTL+HSSPGDLSFSPVR T P S R KRYSG DR
Sbjct: 367 MGSGLPSHSLRHSSIGSTSLPWLMPLNTLVHSSPGDLSFSPVRNTQPSSSRTKRYSGNDR 188
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFS 298
LS I A GA P + AT LENT+ S S
Sbjct: 187 LSAIRFATGAVPSATATRAASTSRGSTARSSSSNLVILENTEGSRSAS 44
Score = 35.0 bits (70), Expect(2) = 4e-053
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2 / +3
Query: 251 KIRAVLVDHAPPSGEAEKDAS 313
K+RAVLVDHA SG+AE++ S
Sbjct: 3 KLRAVLVDHALSSGDAEREPS 65
Score = 33.1 bits (66), Expect(2) = 3e-031
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -2 / -1
Query: 306 SFSASPLGGAWSTSTARIF 250
S SASPL AWSTSTAR F
Sbjct: 58 SRSASPLLSAWSTSTARSF 2
>gb|BE355405.1|BE355405 DG1_114_H09.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 557
Score = 195 bits (420), Expect(2) = 4e-053
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +2 / +3
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 45 DAEREPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 224
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LG V+LTGEKLKSPGEEC KVF +++GKL+DPML+CLKEWDGKPLPI
Sbjct: 225 LGCVFLTGEKLKSPGEECTKVFNGINQGKLVDPMLECLKEWDGKPLPI 368
Score = 123 bits (264), Expect(2) = 3e-031
Identities = 60/108 (55%), Positives = 64/108 (59%)
Frame = -2 / -2
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MG GLPSHSLR SS+GS SLP L NTL+HSSPGDLSFSPVR T P S R KRYSG DR
Sbjct: 367 MGSGLPSHSLRHSSIGSTSLPWLMPLNTLVHSSPGDLSFSPVRNTQPSSSRTKRYSGNDR 188
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFS 298
LS I A GA P + AT LENT+ S S
Sbjct: 187 LSAIRFATGAVPSATATRAASTSRGSTARSSSSNLVILENTEGSRSAS 44
Score = 35.0 bits (70), Expect(2) = 4e-053
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2 / +3
Query: 251 KIRAVLVDHAPPSGEAEKDAS 313
K+RAVLVDHA SG+AE++ S
Sbjct: 3 KLRAVLVDHALSSGDAEREPS 65
Score = 33.1 bits (66), Expect(2) = 3e-031
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -2 / -2
Query: 306 SFSASPLGGAWSTSTARIF 250
S SASPL AWSTSTAR F
Sbjct: 58 SRSASPLLSAWSTSTARSF 2
>gb|CW176959.1|CW176959 104_590_11158763_148_36591_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11158763, DNA
sequence
Length = 609
Score = 209 bits (450), Expect = 7e-053
Identities = 86/129 (66%), Positives = 106/129 (82%)
Frame = +2 / -1
Query: 242 LMKKIRAVLVDHAPPSGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPI 421
LMKK+R VLV+ A +G AE DA SVF+K+ +FEEELR ALP+ +EAAR A E G A I
Sbjct: 609 LMKKLRNVLVERALANGAAEFDAETSVFAKVAQFEEELRAALPKAVEAARAAVENGTAAI 430
Query: 422 ANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEW 601
NRI E RSYPLYRF+RQ++GAVYLTGEK +SPGEE NKV +A+++GK IDP+L+CLKEW
Sbjct: 429 PNRITECRSYPLYRFVRQEVGAVYLTGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEW 250
Query: 602 DGKPLPIC* 628
+G+PLPIC*
Sbjct: 249 NGEPLPIC* 223
Score = 131 bits (280), Expect = 2e-029
Identities = 67/128 (52%), Positives = 73/128 (57%)
Frame = -2 / +2
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQMG G P HSLR SS GSM P L A +TLL SSPG+ FSPVR TAP SWR KR SG
Sbjct: 224 QQMGSGSPFHSLRHSSSGSMCFPWLMATSTLLSSSPGERVFSPVR*TAPTSWRTKR*SG* 403
Query: 447 DRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWST 268
+R S+ILL I A P S A L TD AS SA+PL A ST
Sbjct: 404 ERHSVILLGIAAVPFSTAARAASTALGSAARSSSSNWATLAKTDVSASNSAAPLARARST 583
Query: 267 STARIFFI 244
ST R FF+
Sbjct: 584 STLRSFFM 607
>gb|BG356951.1|BG356951 OV2_12_A10.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 468
Score = 195 bits (420), Expect(2) = 6e-051
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +2 / +1
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
+ + SVFSKI +FEEELR LPRE+EAARVA G AP+ANRI +SRS+PLYRF+R++
Sbjct: 31 DAEREPSVFSKITKFEEELRAVLPREVEAARVAVAEGTAPVANRIADSRSFPLYRFVREE 210
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LG V+LTGEKLKSPGEEC KVF +++GKL+DPML+CLKEWDGKPLPI
Sbjct: 211 LGCVFLTGEKLKSPGEECTKVFNGINQGKLVDPMLECLKEWDGKPLPI 354
Score = 123 bits (264), Expect(2) = 8e-029
Identities = 60/108 (55%), Positives = 64/108 (59%)
Frame = -2 / -2
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MG GLPSHSLR SS+GS SLP L NTL+HSSPGDLSFSPVR T P S R KRYSG DR
Sbjct: 353 MGSGLPSHSLRHSSIGSTSLPWLMPLNTLVHSSPGDLSFSPVRNTQPSSSRTKRYSGNDR 174
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFS 298
LS I A GA P + AT LENT+ S S
Sbjct: 173 LSAIRFATGAVPSATATRAASTSRGSTARSSSSNLVILENTEGSRSAS 30
Score = 27.6 bits (54), Expect(2) = 6e-051
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2 / +1
Query: 263 VLVDHAPPSGEAEKDAS 313
VLVDHA SG+AE++ S
Sbjct: 1 VLVDHALSSGDAEREPS 51
Score = 24.9 bits (48), Expect(2) = 8e-029
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -2
Query: 306 SFSASPLGGAWSTS 265
S SASPL AWSTS
Sbjct: 44 SRSASPLLSAWSTS 3
>gb|BG273178.1|BG273178 OV2_27_G08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 534
Score = 171 bits (369), Expect(3) = 1e-050
Identities = 70/76 (92%), Positives = 71/76 (93%)
Frame = +2 / +2
Query: 413 APIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCL 592
API NRIK SRSYPLYRFIRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPML+CL
Sbjct: 5 APIGNRIKHSRSYPLYRFIRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLECL 184
Query: 593 KEWDGKPLPIC*GRHR 640
KEWDGKPLPIC* R
Sbjct: 185 KEWDGKPLPIC*AAGR 232
Score = 163 bits (350), Expect(4) = 3e-045
Identities = 70/82 (85%), Positives = 70/82 (85%)
Frame = -2 / -1
Query: 657 GLASWHRWRPQQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPR 478
G W R QMGRGLPSHSLR SSMGSMSLPSL ARNTLLHSSPGDLSFSPVRYTAPR
Sbjct: 249 GAGRWRRPAA*QMGRGLPSHSLRHSSMGSMSLPSLSARNTLLHSSPGDLSFSPVRYTAPR 70
Query: 477 SWRMKRYSGYDRLSLILLAIGA 412
SWRMKRYSGYDRL LILL IGA
Sbjct: 69 SWRMKRYSGYDRLCLILLPIGA 4
Score = 117 bits (251), Expect(3) = 6e-028
Identities = 53/71 (74%), Positives = 56/71 (78%)
Frame = -1 / -3
Query: 625 ADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQRVR 446
ADGQGLAVPLLEA+EHGVDELALAE QEH GQVHGA+VLADEAVQRVR
Sbjct: 217 ADGQGLAVPLLEALEHGVDELALAERQEHLVALLAGGLELLAGQVHGAKVLADEAVQRVR 38
Query: 445 PALLDPVGDRR 413
PA+LDPV DRR
Sbjct: 37 PAVLDPVADRR 5
Score = 36.3 bits (73), Expect(3) = 1e-050
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +2 / +2
Query: 662 EEEMTPYAREEEIKKGVFRYSQAGFISFAI* 754
EEE+TPY E K+G GFISFAI*
Sbjct: 272 EEEITPYRMRERNKEGSIFQYSQGFISFAI* 364
Score = 32.2 bits (64), Expect(3) = 1e-050
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2 / +2
Query: 761 LYVVPLYSSFLFGACSSDRVNVYSVCCSWLSHLQYVL 871
LYVV L SSF S V+ +CCS+L+ + +
Sbjct: 380 LYVVVLCSSFFCDCSSDPCKRVFCLCCSYLAAMSLAM 490
Score = 31.8 bits (63), Expect(4) = 3e-045
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 843 EQQTEYTFTRSLLQAPNKKDEYRGTTYND 757
EQQ + T L KKDE+R TTYN+
Sbjct: 462 EQQRQNTRLHGSLLQSQKKDEHRTTTYNN 376
Score = 23.1 bits (44), Expect(3) = 6e-028
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1 / -3
Query: 757 SSDRKRYEACLRIPKYSLLYFFLARIRCHLLL 662
+S+RKR EA + F +RC LLL
Sbjct: 367 TSNRKRNEALRILKNTPFFIPFSHTVRCDLLL 272
Score = 22.6 bits (43), Expect(4) = 3e-045
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 715 KYSLLYFFLA 686
KYSLLY FLA
Sbjct: 326 KYSLLYSFLA 297
Score = 22.6 bits (43), Expect(3) = 6e-028
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3 / -1
Query: 845 KNNRQNTRLHDHCYKLQTK 789
+ RQNTRLH + Q K
Sbjct: 462 EQQRQNTRLHGSLLQSQKK 406
Score = 22.1 bits (42), Expect(4) = 3e-045
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / -1
Query: 756 LQIANDMKP 730
LQIAN+MKP
Sbjct: 366 LQIANEMKP 340
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 796,452,714
Number of Sequences: 832831
Number of extensions: 11173490
Number of successful extensions: 107150
Number of sequences better than 1.0e-020: 133
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 29023289346
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)