TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3829517.2.1
(913 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD219606.1|CD219606 CCC1_57_B01.g1_A007 Callus culture/c... 451 e-126
gb|BE360345.1|BE360345 DG1_62_A04.g1_A002 Dark Grown 1 (DG1... 418 e-118
gb|CD219499.1|CD219499 CCC1_57_B01.b1_A007 Callus culture/c... 405 e-112
gb|CD429627.1|CD429627 ETH1_14_A01.g1_A002 Ethylene-treated... 379 e-104
gb|BG240255.1|BG240255 OV1_19_G06.b1_A002 Ovary 1 (OV1) Sor... 369 e-101
gb|BG049424.1|BG049424 OV1_19_G06.g1_A002 Ovary 1 (OV1) Sor... 308 1e-082
gb|CN126551.1|CN126551 RHOH1_17_G09.g1_A002 Acid- and alkal... 135 3e-074
gb|BE360273.1|BE360273 DG1_62_A04.b1_A002 Dark Grown 1 (DG1... 271 1e-071
gb|CN126468.1|CN126468 RHOH1_17_G09.b1_A002 Acid- and alkal... 135 6e-066
gb|CF433357.1|CF433357 NIT1_26_F06.g1_A002 Nitrogen-deficie... 137 1e-056
gb|CF433307.1|CF433307 NIT1_26_F06.b1_A002 Nitrogen-deficie... 118 5e-052
gb|CF430345.1|CF430345 PH1_27_C08.g1_A002 Phosphorous-defic... 119 1e-039
gb|CD424807.1|CD424807 SA1_7_E10.g1_A002 Salicylic acid-tre... 119 9e-039
gb|BG053561.1|BG053561 RHIZ2_10_G06.g1_A003 Rhizome2 (RHIZ2... 138 2e-035
gb|CX617562.1|CX617562 GABR1_34_A10.g1_A002 GA- or brassino... 83 1e-033
gb|CL162281.1|CL162281 104_354_10806300_114_31830_204 Sorgh... 65 4e-030
gb|BM329179.1|BM329179 PIC1_34_D06.g1_A002 Pathogen-infecte... 118 5e-030
gb|CL162323.1|CL162323 104_354_10806327_116_31831_231 Sorgh... 51 7e-030
gb|CD424704.1|CD424704 SA1_7_E10.b1_A002 Salicylic acid-tre... 118 7e-027
gb|CD223804.1|CD223804 CCC1_30_E07.b1_A007 Callus culture/c... 113 4e-024
gb|CD224945.1|CD224945 CCC1_37_B11.b1_A007 Callus culture/c... 113 4e-024
gb|CL162282.1|CL162282 104_354_10806300_116_31831_204 Sorgh... 65 1e-022
gb|BM324692.1|BM324692 PIC1_34_D06.b1_A002 Pathogen-infecte... 62 7e-022
gb|CW227269.1|CW227269 104_665_11205324_148_37225_038 Sorgh... 51 3e-021
gb|CW479612.1|CW479612 fsbb001f238d13k0 Sorghum methylation... 51 3e-021
gb|CX617477.1|CX617477 GABR1_34_A10.b1_A002 GA- or brassino... 91 4e-021
>gb|CD219606.1|CD219606 CCC1_57_B01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_57_B01_A007 5', mRNA sequence
Length = 657
Score = 451 bits (979), Expect = e-126
Identities = 191/201 (95%), Positives = 193/201 (96%)
Frame = +1 / +2
Query: 1 MAEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMK 180
MAE EAT GRL LYSYWRSSCSHRARIALNLKGV+YEYKAVNLLKGEQSDPEFVKLNPMK
Sbjct: 53 MAEAEATAGRLRLYSYWRSSCSHRARIALNLKGVEYEYKAVNLLKGEQSDPEFVKLNPMK 232
Query: 181 FVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLT 360
FVPALVDG SVIGDSYAI LYLEDKYPEPPLLP DLQKKALNHQIASIVASGIQPLHNLT
Sbjct: 233 FVPALVDGDSVIGDSYAIALYLEDKYPEPPLLPHDLQKKALNHQIASIVASGIQPLHNLT 412
Query: 361 VLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQLKGCAGKYATGDEVQLADVFLAPQIY 540
VLRFIDQKVGAGESVLWTQQQIERGFTAIE+LIQL GCAGKYATGDEVQLADVFLAPQIY
Sbjct: 413 VLRFIDQKVGAGESVLWTQQQIERGFTAIESLIQLXGCAGKYATGDEVQLADVFLAPQIY 592
Query: 541 AAIERTKIDMSNYPTLARLHS 603
AAIERTKIDMSNYP LARLHS
Sbjct: 593 AAIERTKIDMSNYPILARLHS 655
Score = 405 bits (878), Expect = e-112
Identities = 178/201 (88%), Positives = 181/201 (90%)
Frame = -3 / -1
Query: 605 SEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPAHPFSCIRFSIAVKPLS 426
SE SLAR+G*FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPA P SCIR SIAVKPLS
Sbjct: 657 SE*SLARMG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPAQPXSCIRLSIAVKPLS 478
Query: 425 ICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSS 246
ICC*VH TLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFF GYLSS
Sbjct: 477 ICC*VHKTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFF*RS*GRRGGSGYLSS 298
Query: 245 KYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAMRARW 66
KY+ IA*ESPITE PSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS STPLRLRAMRARW
Sbjct: 297 KYNAIA*ESPITESPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYSYSTPLRLRAMRARW 118
Query: 65 EHELRQYEYSISRPTVASTSA 3
EHELRQYEYS+SRP VAS SA
Sbjct: 117 EHELRQYEYSLSRPAVASASA 55
Score = 402 bits (872), Expect = e-111
Identities = 165/193 (85%), Positives = 174/193 (90%)
Frame = +3 / +1
Query: 27 ATDXXXXXXXXXXPPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQ 206
AT+ PP PHRSQSQRCG+RVQGGEPSQGRAV*SRI QA*SYEVRPCVG*W+
Sbjct: 79 ATEAVLVLAQLVLPPRPHRSQSQRCGVRVQGGEPSQGRAV*SRICQA*SYEVRPCVG*WR 258
Query: 207 FCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEG 386
FCNR*LLRD+ VFGGQVP ASSSTSRPSKE FESPDCKHCSFWYSTSP*PHSVEVH*P+G
Sbjct: 259 FCNR*LLRDSIVFGGQVP*ASSSTSRPSKEGFESPDCKHCSFWYSTSP*PHSVEVH*PKG 438
Query: 387 WCRGECVVDSTTNRERFHSY*EPDTTKRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N* 566
WCRGEC+VDSTTNRERFHSY*EP+TT R+ EVC+RR*SPTGRCIPCTPDLCSH*TH*N*
Sbjct: 439 WCRGECLVDSTTNRERFHSY*EPNTTXRLCWEVCDRR*SPTGRCIPCTPDLCSH*TH*N* 618
Query: 567 HVKLPHSC*APLG 605
HVKLPHSC*A LG
Sbjct: 619 HVKLPHSC*ASLG 657
Score = 374 bits (810), Expect = e-102
Identities = 162/180 (90%), Positives = 166/180 (92%)
Frame = -1 / -2
Query: 604 PSGA*QEWGSLTCQF*CVQWLHRSGVQGIHLPVGLHLLLHTSRRILLVVSGSQ*L*NLSR 425
PS A*QEWG+LTCQF*CVQWLHRSGVQGIHLPVGLHLL HTS+ LLVV GSQ*L*NLSR
Sbjct: 656 PSEA*QEWGNLTCQF*CVQWLHRSGVQGIHLPVGLHLLSHTSQHSLLVVLGSQ*L*NLSR 477
Query: 424 FVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLEVEEEALGTCPP 245
FVVEST HSPLHQP GQ*TSTL*GYGEVEYQKLQCLQSGDSK SFEG EVEEEA GTCPP
Sbjct: 476 FVVESTRHSPLHQPFGQ*TSTL*GYGEVEYQKLQCLQSGDSKPSFEGREVEEEAQGTCPP 297
Query: 244 NTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP*EGSPPCTRNPHL*D*ERCGHGG 65
NT+LSRKSH LQN HQPTQGRTS*D*A*+ILDQTARP*EGSPPCTR PHL*D*ERCG GG
Sbjct: 296 NTMLSRKSHRLQNRHQPTQGRTS*D*A*QILDQTARP*EGSPPCTRTPHL*D*ERCGRGG 117
Score = 222 bits (480), Expect(2) = e-103
Identities = 91/102 (89%), Positives = 95/102 (93%)
Frame = -2 / -3
Query: 603 RVEPSKSGVV*HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF*LYQVLNSCETSLD 424
RV+PSK+GV+*HVNFSAFNGCIDLGCKEYICQLDFISC ILP + *LY LNSCETSLD
Sbjct: 655 RVKPSKNGVI*HVNFSAFNGCIDLGCKEYICQLDFISCRILPSTAX*LY*ALNSCETSLD 476
Query: 423 LLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQS 298
LLLSPQ TLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQS
Sbjct: 475 LLLSPQDTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQS 350
Score = 182 bits (392), Expect(3) = 7e-073
Identities = 79/90 (87%), Positives = 81/90 (90%)
Frame = +2 / +3
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT*YN*KDAPGSMQQEMKSNWQ 514
VFNLSITSQC*GSLT+RLVQGRV CGLNNKSREVSQLLR *YN* GSM+QEMKSNWQ
Sbjct: 387 VFNLSITSQC*GSLTKRLVQGRVSCGLNNKSREVSQLLRA*YN*XAVLGSMRQEMKSNWQ 566
Query: 515 MYSLHPRSMQPLNALKLTCQTTPLLLGSTR 604
MYSLHPRSMQPLNALKLTCQ TP LLG TR
Sbjct: 567 MYSLHPRSMQPLNALKLTCQITPFLLGFTR 656
Score = 174 bits (375), Expect(2) = e-103
Identities = 74/82 (90%), Positives = 76/82 (92%)
Frame = -2 / -3
Query: 246 QIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVIHTFEIESDAGTV 67
QIQCYRVRVT YR AINQRRDELHRIKLD+FWIRLLALEKVHRLVLV+HTFEIESDAG V
Sbjct: 298 QIQCYRVRVTDYRIAINQRRDELHRIKLDKFWIRLLALEKVHRLVLVLHTFEIESDAGAV 119
Query: 66 GARAAPVRVQHQSPHRRLHLRH 1
GARAAPVRVQ QSP RRL LRH
Sbjct: 118 GARAAPVRVQPQSPRRRLRLRH 53
Score = 74.8 bits (157), Expect(3) = 7e-073
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +2 / +3
Query: 191 RWLMAVL**VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
RWLMA+L* VTLTR*HCIWRTST SLLFYL TFKR+
Sbjct: 243 RWLMAIL*SVTLTR*HCIWRTSTLSLLFYLTTFKRR 350
Score = 57.9 bits (120), Expect(3) = 7e-073
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = +2 / +3
Query: 26 GD*CCTRTGAARAPTVPASLSISKVW 103
GD* CTRTGAARAPT PASLSISKVW
Sbjct: 78 GD*GCTRTGAARAPTAPASLSISKVW 155
>gb|BE360345.1|BE360345 DG1_62_A04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 657
Score = 418 bits (907), Expect(2) = e-118
Identities = 177/185 (95%), Positives = 180/185 (97%)
Frame = +1 / +3
Query: 130 LKGEQSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNH 309
LKGEQSDPEFVKLNPMKFVPALVDG SVIGDSYAI LYLEDKYPEPPLLP DLQKKALNH
Sbjct: 33 LKGEQSDPEFVKLNPMKFVPALVDGDSVIGDSYAIALYLEDKYPEPPLLPHDLQKKALNH 212
Query: 310 QIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQLKGCAGKYA 489
QIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIE+LIQLKGCAGKYA
Sbjct: 213 QIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIESLIQLKGCAGKYA 392
Query: 490 TGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALPGKQPDAPSS 669
TGDEVQLADVFLAPQIYAAIERTKIDMSNYP LARLHSEYM+HPAFEAALP +QPDAPSS
Sbjct: 393 TGDEVQLADVFLAPQIYAAIERTKIDMSNYPILARLHSEYMAHPAFEAALPRRQPDAPSS 572
Query: 670 S*ELH 684
S*ELH
Sbjct: 573 S*ELH 587
Score = 400 bits (868), Expect(2) = e-112
Identities = 165/185 (89%), Positives = 174/185 (94%)
Frame = +3 / +2
Query: 129 SQGRAV*SRIRQA*SYEVRPCVG*WQFCNR*LLRDNTVFGGQVPRASSSTSRPSKESFES 308
SQGRAV*SRI QA*SYEVRPCVG*W+FCNR*LLRD+ VFGGQVP ASSSTSRPSKE FES
Sbjct: 32 SQGRAV*SRICQA*SYEVRPCVG*WRFCNR*LLRDSIVFGGQVP*ASSSTSRPSKEGFES 211
Query: 309 PDCKHCSFWYSTSP*PHSVEVH*PEGWCRGECVVDSTTNRERFHSY*EPDTTKRMRREVC 488
PDCKHCSFWYSTSP*PHSVEVH*P+GWCRGEC+VDSTTNRERFHSY*EP+TTKR+ EVC
Sbjct: 212 PDCKHCSFWYSTSP*PHSVEVH*PKGWCRGECLVDSTTNRERFHSY*EPNTTKRLCWEVC 391
Query: 489 NRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*SSAPWQATGRPFI 668
+RR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*A LGVH TPC+*SSAP QAT RPF+
Sbjct: 392 DRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*ASLGVHGTPCI*SSAPSQATRRPFL 571
Query: 669 LLGTA 683
LGTA
Sbjct: 572 FLGTA 586
Score = 375 bits (813), Expect(2) = e-106
Identities = 165/194 (85%), Positives = 169/194 (87%)
Frame = -3 / -3
Query: 710 YIQRNNTLGCSS*EDEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IW 531
Y + CSS*E+EGASGCL GSAASNAGC MYSE SLAR+G*FDMSILVRSMAA*IW
Sbjct: 613 YTRTPEQTACSS*EEEGASGCLRGSAASNAGCAMYSE*SLARMG*FDMSILVRSMAA*IW 434
Query: 530 GARNTSASWTSSPVAYFPAHPFSCIRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRL 351
GARNTSASWTSSPVAYFPA PFSCIR SIAVKPLSICC*VH TLSPAPTFWSMNLNTVRL
Sbjct: 433 GARNTSASWTSSPVAYFPAQPFSCIRLSIAVKPLSICC*VHKTLSPAPTFWSMNLNTVRL 254
Query: 350 WRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIG 171
WRG*IPEATMLAIW*FKAFF GYLSSKY+ IA*ESPITE PSTNAGTNFIG
Sbjct: 253 WRG*IPEATMLAIW*FKAFF*RS*GRRGGSGYLSSKYNAIA*ESPITESPSTNAGTNFIG 74
Query: 170 LSLTNSGSDCSPLR 129
LSLTNSGSDCSPLR
Sbjct: 73 LSLTNSGSDCSPLR 32
Score = 372 bits (806), Expect(2) = e-103
Identities = 163/185 (88%), Positives = 169/185 (91%)
Frame = -1 / -1
Query: 682 AVPRRMKGRPVACQGALLQTQGVTCTPSGA*QEWGSLTCQF*CVQWLHRSGVQGIHLPVG 503
AVPR+ KGR VAC+GALLQ QGV CTPS A*QEWG+LTCQF*CVQWLHRSGVQGIHLPVG
Sbjct: 585 AVPRKRKGRLVACEGALLQMQGVPCTPSEA*QEWGNLTCQF*CVQWLHRSGVQGIHLPVG 406
Query: 502 LHLLLHTSRRILLVVSGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQ 323
LHLL HTS+ LLVV GSQ*L*NLSRFVVEST HSPLHQP GQ*TSTL*GYGEVEYQKLQ
Sbjct: 405 LHLLSHTSQHSLLVVLGSQ*L*NLSRFVVESTRHSPLHQPFGQ*TSTL*GYGEVEYQKLQ 226
Query: 322 CLQSGDSKLSFEGLEVEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQT 143
CLQSGDSK SFEG EVEEEA GTCPPNT+LSRKSH LQN HQPTQGRTS*D*A*+ILDQT
Sbjct: 225 CLQSGDSKPSFEGREVEEEAQGTCPPNTMLSRKSHRLQNRHQPTQGRTS*D*A*QILDQT 46
Query: 142 ARP*E 128
ARP*E
Sbjct: 45 ARP*E 31
Score = 251 bits (543), Expect(3) = 3e-087
Identities = 108/144 (75%), Positives = 117/144 (81%)
Frame = -2 / -2
Query: 729 RSIHIYIYSEEQHTRVQFXXXXXXXXXXXRERCFKRRV*HVLRVEPSKSGVV*HVNFSAF 550
R+I + ++ + VQF RERCFK RV HVLRV+PSK+GV+*HVNFSAF
Sbjct: 632 RNITVILH*DAGANSVQFLGRGRGVWLPARERCFKCRVCHVLRVKPSKNGVI*HVNFSAF 453
Query: 549 NGCIDLGCKEYICQLDFISCCILPGASF*LYQVLNSCETSLDLLLSPQHTLPCTNLLVNE 370
NGCIDLGCKEYICQLDFISC ILP +F*LY LNSCETSLDLLLSPQ TLPCTNLLVNE
Sbjct: 452 NGCIDLGCKEYICQLDFISCRILPSTAF*LY*ALNSCETSLDLLLSPQDTLPCTNLLVNE 273
Query: 369 PQHCEVMERLNTRSYNACNLVIQS 298
PQHCEVMERLNTRSYNACNLVIQS
Sbjct: 272 PQHCEVMERLNTRSYNACNLVIQS 201
Score = 235 bits (508), Expect(2) = 4e-077
Identities = 103/123 (83%), Positives = 107/123 (86%)
Frame = +2 / +1
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT*YN*KDAPGSMQQEMKSNWQ 514
VFNLSITSQC*GSLT+RLVQGRV CGLNNKSREVSQLLR *YN*K GSM+QEMKSNWQ
Sbjct: 238 VFNLSITSQC*GSLTKRLVQGRVSCGLNNKSREVSQLLRA*YN*KAVLGSMRQEMKSNWQ 417
Query: 515 MYSLHPRSMQPLNALKLTCQTTPLLLGSTRSTCHTLRLKQRSLASNRTPLHPPRNCTLVC 694
MYSLHPRSMQPLNALKLTCQ TP LLG TRST HTL LKQRSLA N+TPL PRNCTL
Sbjct: 418 MYSLHPRSMQPLNALKLTCQITPFLLGFTRSTWHTLHLKQRSLAGNQTPLPLPRNCTLFA 597
Query: 695 CSS 703
+S
Sbjct: 598 PAS 606
Score = 88.6 bits (187), Expect(3) = 3e-087
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -2 / -2
Query: 246 QIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEK 127
QIQCYRVRVT YR AINQRRDELHRIKLD+FWIRLLALE+
Sbjct: 149 QIQCYRVRVTDYRIAINQRRDELHRIKLDKFWIRLLALER 30
Score = 74.8 bits (157), Expect(2) = 4e-077
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +2 / +1
Query: 191 RWLMAVL**VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
RWLMA+L* VTLTR*HCIWRTST SLLFYL TFKR+
Sbjct: 94 RWLMAIL*SVTLTR*HCIWRTSTLSLLFYLTTFKRR 201
Score = 30.9 bits (61), Expect(2) = e-106
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1 / -3
Query: 136 P*EGSPPCTRNPH 98
P GSPPCTR PH
Sbjct: 40 PLRGSPPCTRTPH 2
Score = 29.9 bits (59), Expect(2) = e-118
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3 / +3
Query: 99 CGLRVQGGEPSQG 137
CG+RVQGGEP +G
Sbjct: 3 CGVRVQGGEPLKG 41
Score = 27.6 bits (54), Expect(2) = e-112
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +1
Query: 97 GVDYEYKAVNL 129
GV+YEYKAVNL
Sbjct: 1 GVEYEYKAVNL 33
Score = 25.4 bits (49), Expect(2) = e-103
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / -1
Query: 129 KVHRLVLVIHT 97
+VHRLVLV+HT
Sbjct: 33 EVHRLVLVLHT 1
Score = 23.1 bits (44), Expect(3) = 3e-087
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 134 LRRFTALYS*ST 99
L RFTALYS ST
Sbjct: 38 LERFTALYSYST 3
>gb|CD219499.1|CD219499 CCC1_57_B01.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_57_B01_A007 3', mRNA sequence
Length = 641
Score = 405 bits (878), Expect = e-112
Identities = 171/179 (95%), Positives = 174/179 (97%)
Frame = +1 / +3
Query: 148 DPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIV 327
DPEFVKLNPMKFVPALVDG SVIGDSYAI LYLEDKYPEPPLLP DLQKKALNHQIASIV
Sbjct: 3 DPEFVKLNPMKFVPALVDGDSVIGDSYAIALYLEDKYPEPPLLPHDLQKKALNHQIASIV 182
Query: 328 ASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQLKGCAGKYATGDEVQ 507
ASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIE+LIQLKGCAGKYATGDEVQ
Sbjct: 183 ASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIESLIQLKGCAGKYATGDEVQ 362
Query: 508 LADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALPGKQPDAPSSS*ELH 684
LADVFLAPQIYAAIERTKIDMSNYP LARLHSEYM+HPAFEAALP +QPDAPSSS*ELH
Sbjct: 363 LADVFLAPQIYAAIERTKIDMSNYPILARLHSEYMAHPAFEAALPRRQPDAPSSS*ELH 539
Score = 387 bits (840), Expect = e-106
Identities = 159/179 (88%), Positives = 168/179 (93%)
Frame = +3 / +2
Query: 147 *SRIRQA*SYEVRPCVG*WQFCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHC 326
*SRI QA*SYEVRPCVG*W+FCNR*LLRD+ VFGGQVP ASSSTSRPSKE FESPDCKHC
Sbjct: 2 *SRICQA*SYEVRPCVG*WRFCNR*LLRDSIVFGGQVP*ASSSTSRPSKEGFESPDCKHC 181
Query: 327 SFWYSTSP*PHSVEVH*PEGWCRGECVVDSTTNRERFHSY*EPDTTKRMRREVCNRR*SP 506
SFWYSTSP*PHSVEVH*P+GWCRGEC+VDSTTNRERFHSY*EP+TTKR+ EVC+RR*SP
Sbjct: 182 SFWYSTSP*PHSVEVH*PKGWCRGECLVDSTTNRERFHSY*EPNTTKRLCWEVCDRR*SP 361
Query: 507 TGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*SSAPWQATGRPFILLGTA 683
TGRCIPCTPDLCSH*TH*N*HVKLPHSC*A LGVH TPC+*SSAP QAT RPF+ LGTA
Sbjct: 362 TGRCIPCTPDLCSH*TH*N*HVKLPHSC*ASLGVHGTPCI*SSAPSQATRRPFLFLGTA 538
Score = 359 bits (779), Expect = 3e-098
Identities = 157/179 (87%), Positives = 163/179 (91%)
Frame = -1 / -3
Query: 682 AVPRRMKGRPVACQGALLQTQGVTCTPSGA*QEWGSLTCQF*CVQWLHRSGVQGIHLPVG 503
AVPR+ KGR VAC+GALLQ QGV CTPS A*QEWG+LTCQF*CVQWLHRSGVQGIHLPVG
Sbjct: 537 AVPRKRKGRLVACEGALLQMQGVPCTPSEA*QEWGNLTCQF*CVQWLHRSGVQGIHLPVG 358
Query: 502 LHLLLHTSRRILLVVSGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQ 323
LHLL HTS+ LLVV GSQ*L*NLSRFVVEST HSPLHQP GQ*TSTL*GYGEVEYQKLQ
Sbjct: 357 LHLLSHTSQHSLLVVLGSQ*L*NLSRFVVESTRHSPLHQPFGQ*TSTL*GYGEVEYQKLQ 178
Query: 322 CLQSGDSKLSFEGLEVEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQ 146
CLQSGDSK SFEG EVEEEA GTCPPNT+LSRKSH LQN HQPTQGRTS*D*A*+ILDQ
Sbjct: 177 CLQSGDSKPSFEGREVEEEAQGTCPPNTMLSRKSHRLQNRHQPTQGRTS*D*A*QILDQ 1
Score = 359 bits (778), Expect = 4e-098
Identities = 159/188 (84%), Positives = 163/188 (86%)
Frame = -3 / -2
Query: 710 YIQRNNTLGCSS*EDEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IW 531
Y + CSS*E+EGASGCL GSAASNAGC MYSE SLAR+G*FDMSILVRSMAA*IW
Sbjct: 565 YTRTPEQTACSS*EEEGASGCLRGSAASNAGCAMYSE*SLARMG*FDMSILVRSMAA*IW 386
Query: 530 GARNTSASWTSSPVAYFPAHPFSCIRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRL 351
GARNTSASWTSSPVAYFPA PFSCIR SIAVKPLSICC*VH TLSPAPTFWSMNLNTVRL
Sbjct: 385 GARNTSASWTSSPVAYFPAQPFSCIRLSIAVKPLSICC*VHKTLSPAPTFWSMNLNTVRL 206
Query: 350 WRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIG 171
WRG*IPEATMLAIW*FKAFF GYLSSKY+ IA*ESPITE PSTNAGTNFIG
Sbjct: 205 WRG*IPEATMLAIW*FKAFF*RS*GRRGGSGYLSSKYNAIA*ESPITESPSTNAGTNFIG 26
Query: 170 LSLTNSGS 147
LSLTNSGS
Sbjct: 25 LSLTNSGS 2
Score = 251 bits (543), Expect(2) = 3e-082
Identities = 108/144 (75%), Positives = 117/144 (81%)
Frame = -2 / -1
Query: 729 RSIHIYIYSEEQHTRVQFXXXXXXXXXXXRERCFKRRV*HVLRVEPSKSGVV*HVNFSAF 550
R+I + ++ + VQF RERCFK RV HVLRV+PSK+GV+*HVNFSAF
Sbjct: 584 RNITVILH*DAGANSVQFLGRGRGVWLPARERCFKCRVCHVLRVKPSKNGVI*HVNFSAF 405
Query: 549 NGCIDLGCKEYICQLDFISCCILPGASF*LYQVLNSCETSLDLLLSPQHTLPCTNLLVNE 370
NGCIDLGCKEYICQLDFISC ILP +F*LY LNSCETSLDLLLSPQ TLPCTNLLVNE
Sbjct: 404 NGCIDLGCKEYICQLDFISCRILPSTAF*LY*ALNSCETSLDLLLSPQDTLPCTNLLVNE 225
Query: 369 PQHCEVMERLNTRSYNACNLVIQS 298
PQHCEVMERLNTRSYNACNLVIQS
Sbjct: 224 PQHCEVMERLNTRSYNACNLVIQS 153
Score = 235 bits (508), Expect(2) = 4e-077
Identities = 103/123 (83%), Positives = 107/123 (86%)
Frame = +2 / +1
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT*YN*KDAPGSMQQEMKSNWQ 514
VFNLSITSQC*GSLT+RLVQGRV CGLNNKSREVSQLLR *YN*K GSM+QEMKSNWQ
Sbjct: 190 VFNLSITSQC*GSLTKRLVQGRVSCGLNNKSREVSQLLRA*YN*KAVLGSMRQEMKSNWQ 369
Query: 515 MYSLHPRSMQPLNALKLTCQTTPLLLGSTRSTCHTLRLKQRSLASNRTPLHPPRNCTLVC 694
MYSLHPRSMQPLNALKLTCQ TP LLG TRST HTL LKQRSLA N+TPL PRNCTL
Sbjct: 370 MYSLHPRSMQPLNALKLTCQITPFLLGFTRSTWHTLHLKQRSLAGNQTPLPLPRNCTLFA 549
Query: 695 CSS 703
+S
Sbjct: 550 PAS 558
Score = 75.8 bits (159), Expect(2) = 3e-082
Identities = 30/33 (90%), Positives = 31/33 (93%)
Frame = -2 / -1
Query: 246 QIQCYRVRVTYYRTAINQRRDELHRIKLDEFWI 148
QIQCYRVRVT YR AINQRRDELHRIKLD+FWI
Sbjct: 101 QIQCYRVRVTDYRIAINQRRDELHRIKLDKFWI 3
Score = 74.8 bits (157), Expect(2) = 4e-077
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +2 / +1
Query: 191 RWLMAVL**VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
RWLMA+L* VTLTR*HCIWRTST SLLFYL TFKR+
Sbjct: 46 RWLMAIL*SVTLTR*HCIWRTSTLSLLFYLTTFKRR 153
>gb|CD429627.1|CD429627 ETH1_14_A01.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_14_A01_A002 5', mRNA sequence
Length = 554
Score = 379 bits (822), Expect = e-104
Identities = 159/167 (95%), Positives = 161/167 (96%)
Frame = +1 / +2
Query: 1 MAEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMK 180
MAE EAT GRL LYSYWRSSCSHRARIALNLKGV+YEYKAVNLLKGEQSDPEFVKLNPMK
Sbjct: 53 MAEAEATAGRLRLYSYWRSSCSHRARIALNLKGVEYEYKAVNLLKGEQSDPEFVKLNPMK 232
Query: 181 FVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLT 360
FVPALVDG SVIGDSYAI LYLEDKYPEPPLLP DLQKKALNHQIASIVASGIQPLHNLT
Sbjct: 233 FVPALVDGDSVIGDSYAIALYLEDKYPEPPLLPHDLQKKALNHQIASIVASGIQPLHNLT 412
Query: 361 VLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQLKGCAGKYATGDE 501
VLRFIDQKVGAGESVLWTQQQIERGFTAIE+LIQLKGCAGKYATGDE
Sbjct: 413 VLRFIDQKVGAGESVLWTQQQIERGFTAIESLIQLKGCAGKYATGDE 553
Score = 337 bits (730), Expect = 2e-091
Identities = 146/166 (87%), Positives = 148/166 (89%)
Frame = -3 / -3
Query: 500 SSPVAYFPAHPFSCIRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATM 321
SSPVAYFPA PFSCIR SIAVKPLSICC*VH TLSPAPTFWSMNLNTVRLWRG*IPEATM
Sbjct: 552 SSPVAYFPAQPFSCIRLSIAVKPLSICC*VHKTLSPAPTFWSMNLNTVRLWRG*IPEATM 373
Query: 320 LAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDC 141
LAIW*FKAFF GYLSSKY+ IA*ESPITE PSTNAGTNFIGLSLTNSGSDC
Sbjct: 372 LAIW*FKAFF*RS*GRRGGSGYLSSKYNAIA*ESPITESPSTNAGTNFIGLSLTNSGSDC 193
Query: 140 SPLRRFTALYS*STPLRLRAMRARWEHELRQYEYSISRPTVASTSA 3
SPLRRFTALYS STPLRLRAMRARWEHELRQYEYS+SRP VAS SA
Sbjct: 192 SPLRRFTALYSYSTPLRLRAMRARWEHELRQYEYSLSRPAVASASA 55
Score = 320 bits (694), Expect = 1e-086
Identities = 132/158 (83%), Positives = 141/158 (89%)
Frame = +3 / +1
Query: 27 ATDXXXXXXXXXXPPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQ 206
AT+ PP PHRSQSQRCG+RVQGGEPSQGRAV*SRI QA*SYEVRPCVG*W+
Sbjct: 79 ATEAVLVLAQLVLPPRPHRSQSQRCGVRVQGGEPSQGRAV*SRICQA*SYEVRPCVG*WR 258
Query: 207 FCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEG 386
FCNR*LLRD+ VFGGQVP ASSSTSRPSKE FESPDCKHCSFWYSTSP*PHSVEVH*P+G
Sbjct: 259 FCNR*LLRDSIVFGGQVP*ASSSTSRPSKEGFESPDCKHCSFWYSTSP*PHSVEVH*PKG 438
Query: 387 WCRGECVVDSTTNRERFHSY*EPDTTKRMRREVCNRR* 500
WCRGEC+VDSTTNRERFHSY*EP+TTKR+ EVC+RR*
Sbjct: 439 WCRGECLVDSTTNRERFHSY*EPNTTKRLCWEVCDRR* 552
Score = 293 bits (634), Expect = 3e-078
Identities = 130/146 (89%), Positives = 133/146 (91%)
Frame = -1 / -1
Query: 502 LHLLLHTSRRILLVVSGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQ 323
LHLL HTS+ LLVV GSQ*L*NLSRFVVEST HSPLHQP GQ*TSTL*GYGEVEYQKLQ
Sbjct: 554 LHLLSHTSQHSLLVVLGSQ*L*NLSRFVVESTRHSPLHQPFGQ*TSTL*GYGEVEYQKLQ 375
Query: 322 CLQSGDSKLSFEGLEVEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQT 143
CLQSGDSK SFEG EVEEEA GTCPPNT+LSRKSH LQN HQPTQGRTS*D*A*+ILDQT
Sbjct: 374 CLQSGDSKPSFEGREVEEEAQGTCPPNTMLSRKSHRLQNRHQPTQGRTS*D*A*QILDQT 195
Query: 142 ARP*EGSPPCTRNPHL*D*ERCGHGG 65
ARP*EGSPPCTR PHL*D*ERCG GG
Sbjct: 194 ARP*EGSPPCTRTPHL*D*ERCGRGG 117
Score = 174 bits (375), Expect(2) = 3e-080
Identities = 74/82 (90%), Positives = 76/82 (92%)
Frame = -2 / -2
Query: 246 QIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVIHTFEIESDAGTV 67
QIQCYRVRVT YR AINQRRDELHRIKLD+FWIRLLALEKVHRLVLV+HTFEIESDAG V
Sbjct: 298 QIQCYRVRVTDYRIAINQRRDELHRIKLDKFWIRLLALEKVHRLVLVLHTFEIESDAGAV 119
Query: 66 GARAAPVRVQHQSPHRRLHLRH 1
GARAAPVRVQ QSP RRL LRH
Sbjct: 118 GARAAPVRVQPQSPRRRLRLRH 53
Score = 146 bits (313), Expect(2) = 3e-080
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = -2 / -2
Query: 501 FISCCILPGASF*LYQVLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYN 322
FISC ILP +F*LY LNSCETSLDLLLSPQ TLPCTNLLVNEPQHCEVMERLNTRSYN
Sbjct: 553 FISCRILPSTAF*LY*ALNSCETSLDLLLSPQDTLPCTNLLVNEPQHCEVMERLNTRSYN 374
Query: 321 ACNLVIQS 298
ACNLVIQS
Sbjct: 373 ACNLVIQS 350
Score = 109 bits (232), Expect(3) = 4e-051
Identities = 49/56 (87%), Positives = 51/56 (91%)
Frame = +2 / +3
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT*YN*KDAPGSMQQEMK 502
VFNLSITSQC*GSLT+RLVQGRV CGLNNKSREVSQLLR *YN*K GSM+QEMK
Sbjct: 387 VFNLSITSQC*GSLTKRLVQGRVSCGLNNKSREVSQLLRA*YN*KAVLGSMRQEMK 554
Score = 74.8 bits (157), Expect(3) = 4e-051
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +2 / +3
Query: 191 RWLMAVL**VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
RWLMA+L* VTLTR*HCIWRTST SLLFYL TFKR+
Sbjct: 243 RWLMAIL*SVTLTR*HCIWRTSTLSLLFYLTTFKRR 350
Score = 57.9 bits (120), Expect(3) = 4e-051
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = +2 / +3
Query: 26 GD*CCTRTGAARAPTVPASLSISKVW 103
GD* CTRTGAARAPT PASLSISKVW
Sbjct: 78 GD*GCTRTGAARAPTAPASLSISKVW 155
>gb|BG240255.1|BG240255 OV1_19_G06.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 522
Score = 369 bits (800), Expect = e-101
Identities = 155/163 (95%), Positives = 157/163 (96%)
Frame = +1 / +3
Query: 1 MAEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMK 180
MAE EAT GRL LYSYWRSSCSHRARIALNLKGV+YEYKAVNLLKGEQSDPEFVKLNPMK
Sbjct: 33 MAEAEATAGRLRLYSYWRSSCSHRARIALNLKGVEYEYKAVNLLKGEQSDPEFVKLNPMK 212
Query: 181 FVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLT 360
FVPALVDG SVIGDSYAI LYLEDKYPEPPLLP DLQKKALNHQIASIVASGIQPLHNLT
Sbjct: 213 FVPALVDGDSVIGDSYAIALYLEDKYPEPPLLPHDLQKKALNHQIASIVASGIQPLHNLT 392
Query: 361 VLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQLKGCAGKYA 489
VLRFIDQKVGAGESVLWTQQQIERGFTAIE+LIQLKGCAGKYA
Sbjct: 393 VLRFIDQKVGAGESVLWTQQQIERGFTAIESLIQLKGCAGKYA 521
Score = 328 bits (711), Expect = 7e-089
Identities = 142/162 (87%), Positives = 144/162 (88%)
Frame = -3 / -3
Query: 488 AYFPAHPFSCIRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW 309
AYFPA PFSCIR SIAVKPLSICC*VH TLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW
Sbjct: 520 AYFPAQPFSCIRLSIAVKPLSICC*VHKTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW 341
Query: 308 *FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLR 129
*FKAFF GYLSSKY+ IA*ESPITE PSTNAGTNFIGLSLTNSGSDCSPLR
Sbjct: 340 *FKAFF*RS*GRRGGSGYLSSKYNAIA*ESPITESPSTNAGTNFIGLSLTNSGSDCSPLR 161
Query: 128 RFTALYS*STPLRLRAMRARWEHELRQYEYSISRPTVASTSA 3
RFTALYS STPLRLRAMRARWEHELRQYEYS+SRP VAS SA
Sbjct: 160 RFTALYSYSTPLRLRAMRARWEHELRQYEYSLSRPAVASASA 35
Score = 315 bits (682), Expect = 7e-085
Identities = 129/154 (83%), Positives = 137/154 (88%)
Frame = +3 / +2
Query: 27 ATDXXXXXXXXXXPPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQ 206
AT+ PP PHRSQSQRCG+RVQGGEPSQGRAV*SRI QA*SYEVRPCVG*W+
Sbjct: 59 ATEAVLVLAQLVLPPRPHRSQSQRCGVRVQGGEPSQGRAV*SRICQA*SYEVRPCVG*WR 238
Query: 207 FCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEG 386
FCNR*LLRD+ VFGGQVP ASSSTSRPSKE FESPDCKHCSFWYSTSP*PHSVEVH*P+G
Sbjct: 239 FCNR*LLRDSIVFGGQVP*ASSSTSRPSKEGFESPDCKHCSFWYSTSP*PHSVEVH*PKG 418
Query: 387 WCRGECVVDSTTNRERFHSY*EPDTTKRMRREVC 488
WCRGEC+VDSTTNRERFHSY*EP+TTKR+ EVC
Sbjct: 419 WCRGECLVDSTTNRERFHSY*EPNTTKRLCWEVC 520
Score = 285 bits (616), Expect = 8e-076
Identities = 126/141 (89%), Positives = 129/141 (91%)
Frame = -1 / -1
Query: 487 HTSRRILLVVSGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSG 308
HTS+ LLVV GSQ*L*NLSRFVVEST HSPLHQP GQ*TSTL*GYGEVEYQKLQCLQSG
Sbjct: 519 HTSQHSLLVVLGSQ*L*NLSRFVVESTRHSPLHQPFGQ*TSTL*GYGEVEYQKLQCLQSG 340
Query: 307 DSKLSFEGLEVEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP*E 128
DSK SFEG EVEEEA GTCPPNT+LSRKSH LQN HQPTQGRTS*D*A*+ILDQTARP*E
Sbjct: 339 DSKPSFEGREVEEEAQGTCPPNTMLSRKSHRLQNRHQPTQGRTS*D*A*QILDQTARP*E 160
Query: 127 GSPPCTRNPHL*D*ERCGHGG 65
GSPPCTR PHL*D*ERCG GG
Sbjct: 159 GSPPCTRTPHL*D*ERCGRGG 97
Score = 174 bits (375), Expect(2) = 1e-077
Identities = 74/82 (90%), Positives = 76/82 (92%)
Frame = -2 / -2
Query: 246 QIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVIHTFEIESDAGTV 67
QIQCYRVRVT YR AINQRRDELHRIKLD+FWIRLLALEKVHRLVLV+HTFEIESDAG V
Sbjct: 278 QIQCYRVRVTDYRIAINQRRDELHRIKLDKFWIRLLALEKVHRLVLVLHTFEIESDAGAV 99
Query: 66 GARAAPVRVQHQSPHRRLHLRH 1
GARAAPVRVQ QSP RRL LRH
Sbjct: 98 GARAAPVRVQPQSPRRRLRLRH 33
Score = 137 bits (293), Expect(2) = 1e-077
Identities = 57/63 (90%), Positives = 58/63 (92%)
Frame = -2 / -2
Query: 486 ILPGASF*LYQVLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLV 307
ILP +F*LY LNSCETSLDLLLSPQ TLPCTNLLVNEPQHCEVMERLNTRSYNACNLV
Sbjct: 518 ILPSTAF*LY*ALNSCETSLDLLLSPQDTLPCTNLLVNEPQHCEVMERLNTRSYNACNLV 339
Query: 306 IQS 298
IQS
Sbjct: 338 IQS 330
Score = 100 bits (212), Expect(3) = 2e-048
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = +2 / +1
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT*YN*KDAPGSMQ 490
VFNLSITSQC*GSLT+RLVQGRV CGLNNKSREVSQLLR *YN*K GSM+
Sbjct: 367 VFNLSITSQC*GSLTKRLVQGRVSCGLNNKSREVSQLLRA*YN*KAVLGSMR 522
Score = 74.8 bits (157), Expect(3) = 2e-048
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +2 / +1
Query: 191 RWLMAVL**VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
RWLMA+L* VTLTR*HCIWRTST SLLFYL TFKR+
Sbjct: 223 RWLMAIL*SVTLTR*HCIWRTSTLSLLFYLTTFKRR 330
Score = 57.9 bits (120), Expect(3) = 2e-048
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = +2 / +1
Query: 26 GD*CCTRTGAARAPTVPASLSISKVW 103
GD* CTRTGAARAPT PASLSISKVW
Sbjct: 58 GD*GCTRTGAARAPTAPASLSISKVW 135
>gb|BG049424.1|BG049424 OV1_19_G06.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 308 bits (666), Expect = 1e-082
Identities = 131/137 (95%), Positives = 134/137 (97%)
Frame = +1 / +3
Query: 274 LPQDLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIEN 453
LP DLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIE+
Sbjct: 3 LPHDLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIES 182
Query: 454 LIQLKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEA 633
LIQLKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYP LARLHSEYM+HPAFEA
Sbjct: 183 LIQLKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPILARLHSEYMAHPAFEA 362
Query: 634 ALPGKQPDAPSSS*ELH 684
ALP +QPDAPSSS*ELH
Sbjct: 363 ALPRRQPDAPSSS*ELH 413
Score = 306 bits (663), Expect = 3e-082
Identities = 122/137 (89%), Positives = 129/137 (94%)
Frame = +3 / +2
Query: 273 STSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEGWCRGECVVDSTTNRERFHSY*E 452
STSRPSKE FESPDCKHCSFWYSTSP*PHSVEVH*P+GWCRGEC+VDSTTNRERFHSY*E
Sbjct: 2 STSRPSKEGFESPDCKHCSFWYSTSP*PHSVEVH*PKGWCRGECLVDSTTNRERFHSY*E 181
Query: 453 PDTTKRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*S 632
P+TTKR+ EVC+RR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*A LGVH TPC+*S
Sbjct: 182 PNTTKRLCWEVCDRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*ASLGVHGTPCI*S 361
Query: 633 SAPWQATGRPFILLGTA 683
SAP QAT RPF+ LGTA
Sbjct: 362 SAPSQATRRPFLFLGTA 412
Score = 290 bits (628), Expect = 2e-077
Identities = 124/140 (88%), Positives = 127/140 (90%)
Frame = -3 / -3
Query: 710 YIQRNNTLGCSS*EDEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IW 531
Y + CSS*E+EGASGCL GSAASNAGC MYSE SLAR+G*FDMSILVRSMAA*IW
Sbjct: 439 YTRTPEQTACSS*EEEGASGCLRGSAASNAGCAMYSE*SLARMG*FDMSILVRSMAA*IW 260
Query: 530 GARNTSASWTSSPVAYFPAHPFSCIRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRL 351
GARNTSASWTSSPVAYFPA PFSCIR SIAVKPLSICC*VH TLSPAPTFWSMNLNTVRL
Sbjct: 259 GARNTSASWTSSPVAYFPAQPFSCIRLSIAVKPLSICC*VHKTLSPAPTFWSMNLNTVRL 80
Query: 350 WRG*IPEATMLAIW*FKAFF 291
WRG*IPEATMLAIW*FKAFF
Sbjct: 79 WRG*IPEATMLAIW*FKAFF 20
Score = 276 bits (598), Expect = 3e-073
Identities = 120/137 (87%), Positives = 124/137 (90%)
Frame = -1 / -1
Query: 682 AVPRRMKGRPVACQGALLQTQGVTCTPSGA*QEWGSLTCQF*CVQWLHRSGVQGIHLPVG 503
AVPR+ KGR VAC+GALLQ QGV CTPS A*QEWG+LTCQF*CVQWLHRSGVQGIHLPVG
Sbjct: 411 AVPRKRKGRLVACEGALLQMQGVPCTPSEA*QEWGNLTCQF*CVQWLHRSGVQGIHLPVG 232
Query: 502 LHLLLHTSRRILLVVSGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQ 323
LHLL HTS+ LLVV GSQ*L*NLSRFVVEST HSPLHQP GQ*TSTL*GYGEVEYQKLQ
Sbjct: 231 LHLLSHTSQHSLLVVLGSQ*L*NLSRFVVESTRHSPLHQPFGQ*TSTL*GYGEVEYQKLQ 52
Query: 322 CLQSGDSKLSFEGLEVE 272
CLQSGDSK SFEG EVE
Sbjct: 51 CLQSGDSKPSFEGREVE 1
Score = 251 bits (543), Expect = 1e-065
Identities = 108/144 (75%), Positives = 117/144 (81%)
Frame = -2 / -2
Query: 729 RSIHIYIYSEEQHTRVQFXXXXXXXXXXXRERCFKRRV*HVLRVEPSKSGVV*HVNFSAF 550
R+I + ++ + VQF RERCFK RV HVLRV+PSK+GV+*HVNFSAF
Sbjct: 458 RNITVILH*DAGANSVQFLGRGRGVWLPARERCFKCRVCHVLRVKPSKNGVI*HVNFSAF 279
Query: 549 NGCIDLGCKEYICQLDFISCCILPGASF*LYQVLNSCETSLDLLLSPQHTLPCTNLLVNE 370
NGCIDLGCKEYICQLDFISC ILP +F*LY LNSCETSLDLLLSPQ TLPCTNLLVNE
Sbjct: 278 NGCIDLGCKEYICQLDFISCRILPSTAF*LY*ALNSCETSLDLLLSPQDTLPCTNLLVNE 99
Query: 369 PQHCEVMERLNTRSYNACNLVIQS 298
PQHCEVMERLNTRSYNACNLVIQS
Sbjct: 98 PQHCEVMERLNTRSYNACNLVIQS 27
Score = 235 bits (508), Expect = 7e-061
Identities = 103/123 (83%), Positives = 107/123 (86%)
Frame = +2 / +1
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT*YN*KDAPGSMQQEMKSNWQ 514
VFNLSITSQC*GSLT+RLVQGRV CGLNNKSREVSQLLR *YN*K GSM+QEMKSNWQ
Sbjct: 64 VFNLSITSQC*GSLTKRLVQGRVSCGLNNKSREVSQLLRA*YN*KAVLGSMRQEMKSNWQ 243
Query: 515 MYSLHPRSMQPLNALKLTCQTTPLLLGSTRSTCHTLRLKQRSLASNRTPLHPPRNCTLVC 694
MYSLHPRSMQPLNALKLTCQ TP LLG TRST HTL LKQRSLA N+TPL PRNCTL
Sbjct: 244 MYSLHPRSMQPLNALKLTCQITPFLLGFTRSTWHTLHLKQRSLAGNQTPLPLPRNCTLFA 423
Query: 695 CSS 703
+S
Sbjct: 424 PAS 432
>gb|CN126551.1|CN126551 RHOH1_17_G09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_17_G09_A002 5', mRNA sequence
Length = 829
Score = 135 bits (290), Expect(3) = 3e-074
Identities = 56/107 (52%), Positives = 78/107 (72%)
Frame = +1 / +2
Query: 142 QSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIAS 321
++DP++ K+NP+K++PALVDG V+ DS AI+LYLEDKYPE PLLP+DL++KALN QIA+
Sbjct: 248 RTDPDYEKINPIKYIPALVDGDIVVSDSLAISLYLEDKYPEHPLLPKDLKRKALNLQIAN 427
Query: 322 IVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
IV S IQPL V+ + + E + Q I++GF AIE L++
Sbjct: 428 IVCSSIQPLQGYAVIGLHEGGMSPDEGLHIVQTYIDKGFRAIEKLLE 568
Score = 118 bits (253), Expect(3) = 3e-074
Identities = 48/69 (69%), Positives = 54/69 (78%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
L+GC KYATGD+VQL DVFL PQI+A I R +IDMS YP L RLH YM +PAFE+ALP
Sbjct: 563 LEGCESKYATGDDVQLGDVFLEPQIHAGINRFQIDMSKYPILERLHDAYMQNPAFESALP 742
Query: 643 GKQPDAPSS 669
QPDAPSS
Sbjct: 743 KNQPDAPSS 769
Score = 95.9 bits (203), Expect(3) = 5e-039
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -3 / -2
Query: 668 DEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPV 489
DEGASG GSA SNAG MY+ WSL+++G FD+SI R M A I G+RNTS +WTSSPV
Sbjct: 768 DEGASG*FLGSADSNAGFCMYASWSLSKIGYFDISIWKRFMPACICGSRNTSPNWTSSPV 589
Query: 488 AYFPAHP 468
AY +HP
Sbjct: 588 AYLLSHP 568
Score = 65.2 bits (136), Expect(3) = 3e-074
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1 / +2
Query: 34 MLYSYWRSSCSHRARIALNLKGVDYEYKAVN 126
+LY+ W SSCSHR RIALNLKGVDYEYK+VN
Sbjct: 152 ILYNAWISSCSHRVRIALNLKGVDYEYKSVN 244
Score = 57.9 bits (120), Expect(3) = 5e-039
Identities = 34/67 (50%), Positives = 38/67 (56%)
Frame = -3 / -2
Query: 347 RG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGL 168
RG*+ E TM AI +AF GYLSSKY+ IA ES T PSTNAG IGL
Sbjct: 453 RG*MLEQTMFAI*RLRAFLLRSLGRRGCSGYLSSKYNEIARESETTMSPSTNAGIYLIGL 274
Query: 167 SLTNSGS 147
+ SGS
Sbjct: 273 IFS*SGS 253
Score = 47.3 bits (97), Expect(3) = 5e-039
Identities = 21/29 (72%), Positives = 21/29 (72%)
Frame = -3 / -2
Query: 125 FTALYS*STPLRLRAMRARWEHELRQYEY 39
FT LYS*STPLR AMR RWE EL Q Y
Sbjct: 243 FTDLYS*STPLRFSAMRTRWEQELIQALY 157
>gb|BE360273.1|BE360273 DG1_62_A04.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 374
Score = 271 bits (586), Expect = 1e-071
Identities = 114/124 (91%), Positives = 118/124 (95%)
Frame = +1 / +3
Query: 55 SSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPALVDGSSVIGDSYAI 234
+SCSHRARIALNLK V+YEY AVNLLKGEQSDPEFVKLNPM FVPALVDG SVIGDSYAI
Sbjct: 3 TSCSHRARIALNLKSVEYEYNAVNLLKGEQSDPEFVKLNPMNFVPALVDGDSVIGDSYAI 182
Query: 235 TLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWT 414
TLYLEDKYPEPPLLP +LQKKALNHQIASIVASGIQPLHNLTVL+FIDQKVGA ESVLWT
Sbjct: 183 TLYLEDKYPEPPLLPHNLQKKALNHQIASIVASGIQPLHNLTVLKFIDQKVGAWESVLWT 362
Query: 415 QQQI 426
QQQI
Sbjct: 363 QQQI 374
Score = 262 bits (566), Expect = 7e-069
Identities = 105/120 (87%), Positives = 112/120 (93%)
Frame = +3 / +2
Query: 66 PPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQFCNR*LLRDNTVF 245
PP PHRSQSQ+CG+RVQ GEPSQGRAV*SRI QA*SYE+RPCVG*W+FCNR*LLRDN VF
Sbjct: 14 PPRPHRSQSQKCGVRVQRGEPSQGRAV*SRICQA*SYELRPCVG*WRFCNR*LLRDNIVF 193
Query: 246 GGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEGWCRGECVVDSTTN 425
GGQVP ASSSTS+PSKE FESPDCKHCSFWYSTSP*PHSVEVH*P+ WC GEC+VDSTTN
Sbjct: 194 GGQVP*ASSSTSQPSKEGFESPDCKHCSFWYSTSP*PHSVEVH*PKSWCMGECLVDSTTN 373
Score = 240 bits (518), Expect = 3e-062
Identities = 104/120 (86%), Positives = 108/120 (90%)
Frame = -1 / -3
Query: 424 FVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLEVEEEALGTCPP 245
FVVEST HSP+HQ GQ*TSTL*GYGEVEYQKLQCLQSGDSK SFEG EVEEEA GTCPP
Sbjct: 372 FVVESTRHSPMHQLFGQ*TSTL*GYGEVEYQKLQCLQSGDSKPSFEGCEVEEEAQGTCPP 193
Query: 244 NTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP*EGSPPCTRNPHL*D*ERCGHGG 65
NT+LSRKSH LQN HQPTQGR+S*D*A*+ILDQTARP*EGSP CTR PH *D*ERCG GG
Sbjct: 192 NTMLSRKSHRLQNRHQPTQGRSS*D*A*QILDQTARP*EGSPRCTRTPHF*D*ERCGRGG 13
Score = 143 bits (306), Expect(2) = 2e-058
Identities = 62/68 (91%), Positives = 64/68 (94%)
Frame = -3 / -2
Query: 257 YLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAM 78
YLSSKY+VIA*ESPITE PSTNAGT FIGLSLTNSGSDCSPLRRFTALYS ST LRLRAM
Sbjct: 205 YLSSKYNVIA*ESPITESPSTNAGTKFIGLSLTNSGSDCSPLRRFTALYSYSTLLRLRAM 26
Query: 77 RARWEHEL 54
RARWEHE+
Sbjct: 25 RARWEHEV 2
Score = 136 bits (291), Expect(2) = 2e-054
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = -2 / -1
Query: 246 QIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVIHTFEIESDAGTV 67
QIQCYRVRVT YR AINQRRDE+HRIKLD+FWIRLLALEKVHR+VLV+HTFEIESDAG V
Sbjct: 194 QIQCYRVRVTDYRIAINQRRDEVHRIKLDKFWIRLLALEKVHRVVLVLHTFEIESDAGAV 15
Query: 66 GAR 58
GAR
Sbjct: 14 GAR 6
Score = 104 bits (222), Expect(2) = 2e-058
Identities = 42/45 (93%), Positives = 42/45 (93%)
Frame = -3 / -2
Query: 425 ICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFF 291
ICC*VH TLS APTFWSMN NTVRLWRG*IPEATMLAIW*FKAFF
Sbjct: 373 ICC*VHKTLSHAPTFWSMNFNTVRLWRG*IPEATMLAIW*FKAFF 239
Score = 98.2 bits (208), Expect(2) = 2e-054
Identities = 40/43 (93%), Positives = 40/43 (93%)
Frame = -2 / -1
Query: 426 DLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQS 298
DLLLSPQ TLPCTN LVNE QHCEVMERLNTRSYNACNLVIQS
Sbjct: 374 DLLLSPQDTLPCTNFLVNELQHCEVMERLNTRSYNACNLVIQS 246
Score = 74.8 bits (157), Expect(3) = 9e-031
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +2 / +1
Query: 191 RWLMAVL**VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
RWLMA+L* VTLTR*HCIWRTST SLLFYL TFKR+
Sbjct: 139 RWLMAIL*SVTLTR*HCIWRTSTLSLLFYLTTFKRR 246
Score = 61.1 bits (127), Expect(3) = 9e-031
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +2 / +1
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNK 424
VFNLSITSQC* SLT++LV GRV CGLNNK
Sbjct: 283 VFNLSITSQC*SSLTKKLVHGRVSCGLNNK 372
Score = 37.3 bits (75), Expect(3) = 9e-031
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +2 / +1
Query: 53 AARAPTVPASLSISKVW 103
A RAPT PASLSISKVW
Sbjct: 1 APRAPTAPASLSISKVW 51
>gb|CN126468.1|CN126468 RHOH1_17_G09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_17_G09_A002 3', mRNA sequence
Length = 738
Score = 135 bits (290), Expect(3) = 6e-066
Identities = 56/107 (52%), Positives = 78/107 (72%)
Frame = +1 / +2
Query: 142 QSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIAS 321
++DP++ K+NP+K++PALVDG V+ DS AI+LYLEDKYPE PLLP+DL++KALN QIA+
Sbjct: 53 RTDPDYEKINPIKYIPALVDGDIVVSDSLAISLYLEDKYPEHPLLPKDLKRKALNLQIAN 232
Query: 322 IVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
IV S IQPL V+ + + E + Q I++GF AIE L++
Sbjct: 233 IVCSSIQPLQGYAVIGLHEGGMSPDEGLHIVQTYIDKGFRAIEKLLE 373
Score = 117 bits (250), Expect(3) = 6e-066
Identities = 48/69 (69%), Positives = 53/69 (76%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
L+GC KYATGD+VQL DVFL PQI+A I R +IDMS YP L RLH YM +PAFE ALP
Sbjct: 368 LEGCESKYATGDDVQLGDVFLEPQIHAGINRFQIDMSKYPILERLHDAYMQNPAFEFALP 547
Query: 643 GKQPDAPSS 669
QPDAPSS
Sbjct: 548 KNQPDAPSS 574
Score = 95.9 bits (203), Expect(3) = 1e-033
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -3 / -1
Query: 668 DEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPV 489
DEGASG GSA SNAG MY+ WSL+++G FD+SI R M A I G+RNTS +WTSSPV
Sbjct: 573 DEGASG*FLGSANSNAGFCMYASWSLSKIGYFDISIWKRFMPACICGSRNTSPNWTSSPV 394
Query: 488 AYFPAHP 468
AY +HP
Sbjct: 393 AYLLSHP 373
Score = 57.9 bits (120), Expect(3) = 1e-033
Identities = 34/67 (50%), Positives = 38/67 (56%)
Frame = -3 / -1
Query: 347 RG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGL 168
RG*+ E TM AI +AF GYLSSKY+ IA ES T PSTNAG IGL
Sbjct: 258 RG*MLEQTMFAI*RLRAFLLRSLGRRGCSGYLSSKYNEIARESETTMSPSTNAGIYLIGL 79
Query: 167 SLTNSGS 147
+ SGS
Sbjct: 78 IFS*SGS 58
Score = 38.6 bits (78), Expect(3) = 6e-066
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1 / +2
Query: 79 IALNLKGVDYEYKAVN 126
IALNLKGVDYEYK+VN
Sbjct: 2 IALNLKGVDYEYKSVN 49
Score = 29.5 bits (58), Expect(3) = 1e-033
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 125 FTALYS*STPLRLRAM 78
FT LYS*STPLR AM
Sbjct: 48 FTDLYS*STPLRFSAM 1
>gb|CF433357.1|CF433357 NIT1_26_F06.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_26_F06_A002 5', mRNA sequence
Length = 807
Score = 137 bits (294), Expect(3) = 1e-056
Identities = 56/107 (52%), Positives = 79/107 (73%)
Frame = +1 / +1
Query: 142 QSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIAS 321
++DP++ K+NP+K++PALVDG V+ DS AI+LYLEDKYPE PLLP+DL++KALN QIA+
Sbjct: 391 RTDPDYEKINPIKYIPALVDGDIVVSDSLAISLYLEDKYPEHPLLPKDLKRKALNLQIAN 570
Query: 322 IVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
IV S IQPL V+ + ++ E + Q I++GF AIE L++
Sbjct: 571 IVCSSIQPLQGYAVIGLHEGRMSPDEGLHIVQTYIDKGFRAIEKLLE 711
Score = 65.2 bits (136), Expect(3) = 1e-056
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1 / +1
Query: 34 MLYSYWRSSCSHRARIALNLKGVDYEYKAVN 126
+LY+ W SSCSHR RIALNLKGVDYEYK+VN
Sbjct: 295 ILYNAWISSCSHRVRIALNLKGVDYEYKSVN 387
Score = 57.9 bits (120), Expect(3) = 1e-056
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTK 561
L+GC KYATGD+VQL DVFL PQI+A I R K
Sbjct: 706 LEGCESKYATGDDVQLGDVFLEPQIHAGINRFK 804
Score = 57.9 bits (120), Expect(3) = 1e-024
Identities = 34/67 (50%), Positives = 38/67 (56%)
Frame = -3 / -2
Query: 347 RG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGL 168
RG*+ E TM AI +AF GYLSSKY+ IA ES T PSTNAG IGL
Sbjct: 596 RG*MLEQTMFAI*RLRAFLLRSLGRRGCSGYLSSKYNEIARESETTMSPSTNAGIYLIGL 417
Query: 167 SLTNSGS 147
+ SGS
Sbjct: 416 IFS*SGS 396
Score = 47.3 bits (97), Expect(3) = 1e-024
Identities = 21/29 (72%), Positives = 21/29 (72%)
Frame = -3 / -2
Query: 125 FTALYS*STPLRLRAMRARWEHELRQYEY 39
FT LYS*STPLR AMR RWE EL Q Y
Sbjct: 386 FTDLYS*STPLRFSAMRTRWEQELIQALY 300
Score = 47.3 bits (97), Expect(3) = 1e-024
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = -3 / -2
Query: 560 LVRSMAA*IWGARNTSASWTSSPVAYFPAHP 468
L R M A I G+RNTS +WTSSPVAY +HP
Sbjct: 803 LKRFMPACICGSRNTSPNWTSSPVAYLLSHP 711
>gb|CF433307.1|CF433307 NIT1_26_F06.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_26_F06_A002 3', mRNA sequence
Length = 699
Score = 118 bits (253), Expect(2) = 5e-052
Identities = 48/69 (69%), Positives = 54/69 (78%)
Frame = +1 / +3
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
L+GC KYATGD+VQL DVFL PQI+A I R +IDMS YP L RLH YM +PAFE+ALP
Sbjct: 264 LEGCESKYATGDDVQLGDVFLEPQIHAGINRFQIDMSKYPILERLHDAYMQNPAFESALP 443
Query: 643 GKQPDAPSS 669
QPDAPSS
Sbjct: 444 KNQPDAPSS 470
Score = 107 bits (229), Expect(2) = 5e-052
Identities = 47/89 (52%), Positives = 62/89 (69%)
Frame = +1 / +3
Query: 196 VDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRFI 375
VDG V+ DS AI+LYLEDKYPE PLLP+DL++KALN QIA+IV S IQPL V+
Sbjct: 3 VDGDIVVSDSLAISLYLEDKYPEHPLLPKDLKRKALNLQIANIVCSSIQPLQGYAVIGLH 182
Query: 376 DQKVGAGESVLWTQQQIERGFTAIENLIQ 462
+ ++ E + Q I++GF AIE L++
Sbjct: 183 EGRMSPDEGLHIVQTYIDKGFRAIEKLLE 269
Score = 95.9 bits (203), Expect(2) = 2e-025
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -3 / -3
Query: 668 DEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPV 489
DEGASG GSA SNAG MY+ WSL+++G FD+SI R M A I G+RNTS +WTSSPV
Sbjct: 469 DEGASG*FLGSADSNAGFCMYASWSLSKIGYFDISIWKRFMPACICGSRNTSPNWTSSPV 290
Query: 488 AYFPAHP 468
AY +HP
Sbjct: 289 AYLLSHP 269
Score = 41.4 bits (84), Expect(2) = 2e-025
Identities = 25/51 (49%), Positives = 28/51 (54%)
Frame = -3 / -3
Query: 347 RG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPST 195
RG*+ E TM AI +AF GYLSSKY+ IA ES T PST
Sbjct: 154 RG*MLEQTMFAI*RLRAFLLRSLGRRGCSGYLSSKYNEIARESETTMSPST 2
>gb|CF430345.1|CF430345 PH1_27_C08.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_C08_A002 5', mRNA sequence
Length = 702
Score = 119 bits (255), Expect(2) = 1e-039
Identities = 47/75 (62%), Positives = 62/75 (82%)
Frame = +1 / +3
Query: 142 QSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIAS 321
++DP++ K+NP+K++PALVDG V+ DS AI+LYLEDKYPE PLLP+DL++KALN QIA+
Sbjct: 459 RTDPDYEKINPIKYIPALVDGDIVVSDSLAISLYLEDKYPEHPLLPKDLKRKALNLQIAN 638
Query: 322 IVASGIQPLHNLTVL 366
IV S IQPL V+
Sbjct: 639 IVCSSIQPLQGYAVI 683
Score = 65.2 bits (136), Expect(2) = 1e-039
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1 / +3
Query: 34 MLYSYWRSSCSHRARIALNLKGVDYEYKAVN 126
+LY+ W SSCSHR RIALNLKGVDYEYK+VN
Sbjct: 363 ILYNAWISSCSHRVRIALNLKGVDYEYKSVN 455
>gb|CD424807.1|CD424807 SA1_7_E10.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_7_E10_A002 5', mRNA sequence
Length = 689
Score = 119 bits (255), Expect(2) = 9e-039
Identities = 47/75 (62%), Positives = 62/75 (82%)
Frame = +1 / +2
Query: 142 QSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIAS 321
++DP++ K+NP+K++PALVDG V+ DS AI+LYLEDKYPE PLLP+DL++KALN QIA+
Sbjct: 455 RTDPDYEKINPIKYIPALVDGDIVVSDSLAISLYLEDKYPEHPLLPKDLKRKALNLQIAN 634
Query: 322 IVASGIQPLHNLTVL 366
IV S IQPL V+
Sbjct: 635 IVCSSIQPLQGYAVI 679
Score = 62.5 bits (130), Expect(2) = 9e-039
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +1 / +2
Query: 34 MLYSYWRSSCSHRARIALNLKGVDYEYKAVN 126
+LY+ W SSCSHR RIALNL GVDYEYK+VN
Sbjct: 359 ILYNAWISSCSHRVRIALNLXGVDYEYKSVN 451
>gb|BG053561.1|BG053561 RHIZ2_10_G06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 368
Score = 138 bits (295), Expect(2) = 2e-035
Identities = 59/66 (89%), Positives = 62/66 (93%)
Frame = +1 / +2
Query: 487 ATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALPGKQPDAPS 666
ATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTL RLHS+YM+ AFEAALP +QPDAPS
Sbjct: 2 ATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLVRLHSKYMAPLAFEAALPARQPDAPS 181
Query: 667 SS*ELH 684
SS*ELH
Sbjct: 182 SS*ELH 199
Score = 136 bits (292), Expect(3) = 3e-033
Identities = 56/66 (84%), Positives = 59/66 (89%)
Frame = +3 / +1
Query: 486 CNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*SSAPWQATGRPF 665
C+RR*SPTGRCIPC PDLCSH*TH*N*HVKLPHSC*A L VH TPC+*SSAP QAT RPF
Sbjct: 1 CDRR*SPTGRCIPCPPDLCSH*TH*N*HVKLPHSC*ASLEVHGTPCI*SSAPRQATRRPF 180
Query: 666 ILLGTA 683
+ LGTA
Sbjct: 181 LFLGTA 198
Score = 127 bits (272), Expect(2) = 2e-034
Identities = 59/75 (78%), Positives = 61/75 (81%)
Frame = -3 / -3
Query: 710 YIQRNNTLGCSS*EDEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IW 531
Y + CSS*E+EGASGCL GSAASNA MY E SL RVG*FDMSILVRSMAA*IW
Sbjct: 225 YTRTPEQTACSS*EEEGASGCLAGSAASNARGAMYFE*SLTRVG*FDMSILVRSMAA*IW 46
Query: 530 GARNTSASWTSSPVA 486
GARNTSASWTSSPVA
Sbjct: 45 GARNTSASWTSSPVA 1
Score = 126 bits (269), Expect(2) = 7e-030
Identities = 52/64 (81%), Positives = 56/64 (87%)
Frame = -1 / -1
Query: 682 AVPRRMKGRPVACQGALLQTQGVTCTPSGA*QEWGSLTCQF*CVQWLHRSGVQGIHLPVG 503
AVP++ KGR VA +GALLQ QGV CT S A*QEWG+LTCQF*CVQWLHRSG QGIHLPVG
Sbjct: 197 AVPKKRKGRLVAWRGALLQMQGVPCTSSEA*QEWGNLTCQF*CVQWLHRSGGQGIHLPVG 18
Query: 502 LHLL 491
LHLL
Sbjct: 17 LHLL 6
Score = 123 bits (263), Expect = 4e-027
Identities = 54/72 (75%), Positives = 57/72 (79%)
Frame = +2 / +3
Query: 488 QQEMKSNWQMYSLHPRSMQPLNALKLTCQTTPLLLGSTRSTCHTLRLKQRSLASNRTPLH 667
+QEMKSNWQMYSL PRSMQPLNALKLTCQ TPLLLG TRST H L LKQRS N+TPL
Sbjct: 3 RQEMKSNWQMYSLPPRSMQPLNALKLTCQITPLLLGFTRSTWHPLHLKQRSPPGNQTPLP 182
Query: 668 PPRNCTLVCCSS 703
RNCTL +S
Sbjct: 183 LLRNCTLFAPAS 218
Score = 108 bits (230), Expect(2) = 3e-024
Identities = 47/80 (58%), Positives = 56/80 (70%)
Frame = -2 / -2
Query: 729 RSIHIYIYSEEQHTRVQFXXXXXXXXXXXRERCFKRRV*HVLRVEPSKSGVV*HVNFSAF 550
R+I + ++ + VQF ERCFK + HVLRV+P+KSGV+*HVNFSAF
Sbjct: 244 RNITVILH*DAGANSVQFLRRGRGVWLPGGERCFKCKGCHVLRVKPNKSGVI*HVNFSAF 65
Query: 549 NGCIDLGCKEYICQLDFISC 490
NGCIDLG KEYICQLDFISC
Sbjct: 64 NGCIDLGGKEYICQLDFISC 5
Score = 40.0 bits (81), Expect(2) = 2e-034
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = -2 / -1
Query: 825 PQRRFMPLVSEITKTFDIFRHSRRNSVIINSYRSIHIYIYSEEQHT 688
P+RRFM +VSEITK F + R + +I S R+ +YSEE ++
Sbjct: 368 PKRRFMLIVSEITKLFALCRGNSVLILIDRSNRNNSKSVYSEEHYS 231
Score = 32.7 bits (65), Expect(2) = 2e-035
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1 / +3
Query: 766 SKNVKSFCDFRD*RHEASLW 825
S K FCDFRD +HE S W
Sbjct: 309 SAKCK*FCDFRDYQHEPSFW 368
Score = 26.3 bits (51), Expect(2) = 7e-030
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -3 / -2
Query: 821 NDASCR*SLKSQKLLTF 771
ND SC *SLKSQ L F
Sbjct: 364 NDGSC**SLKSQNYLHF 314
Score = 25.4 bits (49), Expect(2) = 3e-024
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1 / -3
Query: 820 TTLHAASL*NHK 785
TT+HA SL*NHK
Sbjct: 363 TTVHADSL*NHK 328
Score = 24.9 bits (48), Expect(3) = 3e-033
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1 / +3
Query: 724 TSVRINNYRVSSAMSKNVKSFCDFR 798
TS+ N YR+SSA K F D++
Sbjct: 276 TSIYKNKYRISSAKCK*FCDFRDYQ 350
Score = 21.7 bits (41), Expect(3) = 3e-033
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2 / +1
Query: 785 FVISETSGMKRR 820
FVISET M RR
Sbjct: 328 FVISETISMNRR 363
>gb|CX617562.1|CX617562 GABR1_34_A10.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_34_A10_A002 5', mRNA sequence
Length = 689
Score = 83.1 bits (175), Expect(3) = 1e-033
Identities = 35/50 (70%), Positives = 39/50 (78%)
Frame = +1 / +2
Query: 4 AEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDP 153
A V A +L LYS+WRSSCS R RIALNLKG++YEYK VNLL EQSDP
Sbjct: 122 AAVPAKNLKLKLYSFWRSSCSQRVRIALNLKGLEYEYKPVNLLANEQSDP 271
Score = 51.0 bits (105), Expect(3) = 1e-033
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +1 / +1
Query: 154 EFVKLNPMKFVPALVDGSSVIGDSYAITL 240
EF +LNP+K+VPALVDG +VI DS+AI L
Sbjct: 376 EFERLNPIKYVPALVDGDTVIADSFAILL 462
Score = 49.2 bits (101), Expect(3) = 1e-033
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +1 / +1
Query: 241 YLEDKYPEPPLLPQDLQKKALNHQIA 318
YLEDKYP+ PLLPQD K+ALN QIA
Sbjct: 574 YLEDKYPQYPLLPQDPNKRALNIQIA 651
>gb|CL162281.1|CL162281 104_354_10806300_114_31830_204 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10806300, DNA
sequence
Length = 769
Score = 65.2 bits (136), Expect(3) = 4e-030
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +1 / +3
Query: 148 DPEFVKLNPMKFVPALVDGSSVIGDSYAITL 240
+ EFVKLNPMKFVPALVDG SVIGDSYAI L
Sbjct: 309 EAEFVKLNPMKFVPALVDGDSVIGDSYAIAL 401
Score = 64.8 bits (135), Expect(3) = 4e-021
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = -2 / -3
Query: 240 QCYRVRVTYYRTAINQRRDELHRIKLDEF 154
QCYRVRVT YR AINQRRDELHRIKLD+F
Sbjct: 401 QCYRVRVTDYRIAINQRRDELHRIKLDKF 315
Score = 62.9 bits (131), Expect(3) = 3e-026
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3 / +2
Query: 150 SRIRQA*SYEVRPCVG*WQFCNR*LLRDN 236
SRI QA*SYEVRPCVG*W+FCNR*LLRD+
Sbjct: 311 SRICQA*SYEVRPCVG*WRFCNR*LLRDS 397
Score = 62.5 bits (130), Expect(3) = 4e-030
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +1 / +3
Query: 241 YLEDKYPEPPLLPQDLQKKALNHQI 315
YLEDKYPEPPLLP DLQKKALNHQ+
Sbjct: 480 YLEDKYPEPPLLPHDLQKKALNHQV 554
Score = 51.9 bits (107), Expect(3) = 3e-026
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +3 / +2
Query: 240 VFGGQVPRASSSTSRPSKESFESP 311
VFGGQVP ASSSTSRPSKE FESP
Sbjct: 479 VFGGQVP*ASSSTSRPSKEGFESP 550
Score = 50.6 bits (104), Expect(3) = 4e-021
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = -1 / -2
Query: 154 LDQTARP*EGSPPCTRNPHL 95
LDQTARP*EGSPPCTR PHL
Sbjct: 81 LDQTARP*EGSPPCTRTPHL 22
Score = 47.3 bits (97), Expect(3) = 4e-030
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3 / +2
Query: 96 RCGLRVQGGEPSQGRAV*SR 155
RCG+RVQGGEPSQGRAV*SR
Sbjct: 23 RCGVRVQGGEPSQGRAV*SR 82
Score = 46.9 bits (96), Expect(3) = 3e-026
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1 / +3
Query: 97 GVDYEYKAVNLLKGEQSDP 153
GV+YEYKAVNLLKGEQSDP
Sbjct: 24 GVEYEYKAVNLLKGEQSDP 80
Score = 29.0 bits (57), Expect(3) = 4e-021
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3 / -1
Query: 311 W*FKAFFXXXXXXXXXXGYLSSKYSV 234
W*FKAFF GYLSSKY +
Sbjct: 550 W*FKAFF*RS*GRRGGSGYLSSKYCI 473
>gb|BM329179.1|BM329179 PIC1_34_D06.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 553
Score = 118 bits (253), Expect(2) = 5e-030
Identities = 48/69 (69%), Positives = 54/69 (78%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
L+GC KYATGD+VQL DVFL PQI+A I R +IDMS YP L RLH YM +PAFE+ALP
Sbjct: 128 LEGCESKYATGDDVQLGDVFLEPQIHAGINRFQIDMSKYPILERLHDAYMQNPAFESALP 307
Query: 643 GKQPDAPSS 669
QPDAPSS
Sbjct: 308 KNQPDAPSS 334
Score = 34.1 bits (68), Expect(2) = 5e-030
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1 / +2
Query: 331 SGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
S IQPL V+ + ++ E + Q I++GF AIE L++
Sbjct: 2 SSIQPLQGYAVIGLHEGRMSPDEGLHIVQTYIDKGFRAIEKLLE 133
>gb|CL162323.1|CL162323 104_354_10806327_116_31831_231 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10806327, DNA
sequence
Length = 664
Score = 51.0 bits (105), Expect(4) = 7e-030
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +1 / -3
Query: 154 EFVKLNPMKFVPALVDGSSVIGDSYAITL 240
EF +LNP+K+VPALVDG +VI DS+AI L
Sbjct: 275 EFERLNPIKYVPALVDGDTVIADSFAILL 189
Score = 51.0 bits (105), Expect(4) = 7e-030
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +1 / -1
Query: 4 AEVEATVGRLMLYSYWRSSCSHRARIALNLKG 99
A V A +L LYS+WRSSCS R RIALNLKG
Sbjct: 631 AAVPAKNLKLKLYSFWRSSCSQRVRIALNLKG 536
Score = 46.9 bits (96), Expect(4) = 7e-030
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +1 / -3
Query: 241 YLEDKYPEPPLLPQDLQKKALNHQI 315
YLEDKYP+ PLLPQD K+ALN Q+
Sbjct: 77 YLEDKYPQYPLLPQDPNKRALNIQV 3
Score = 38.6 bits (78), Expect(4) = 7e-030
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1 / -1
Query: 85 LNLKGVDYEYKAVNLLKGEQSDP 153
++ +G++YEYK VNLL EQSDP
Sbjct: 448 ISSQGLEYEYKPVNLLANEQSDP 380
>gb|CD424704.1|CD424704 SA1_7_E10.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_7_E10_A002 3', mRNA sequence
Length = 462
Score = 118 bits (253), Expect(2) = 7e-027
Identities = 48/69 (69%), Positives = 54/69 (78%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
L+GC KYATGD+VQL DVFL PQI+A I R +IDMS YP L RLH YM +PAFE+ALP
Sbjct: 103 LEGCESKYATGDDVQLGDVFLEPQIHAGINRFQIDMSKYPILERLHDAYMQNPAFESALP 282
Query: 643 GKQPDAPSS 669
QPDAPSS
Sbjct: 283 KNQPDAPSS 309
Score = 23.5 bits (45), Expect(2) = 7e-027
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1 / +1
Query: 361 VLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
V+ + ++ E + Q I++GF AIE L++
Sbjct: 7 VIGLHEGRMSPDEGLHIVQTYIDKGFRAIEKLLE 108
>gb|CD223804.1|CD223804 CCC1_30_E07.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_30_E07_A007 3', mRNA sequence
Length = 663
Score = 113 bits (241), Expect = 4e-024
Identities = 47/69 (68%), Positives = 53/69 (76%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
L+GC KYATGDEVQLADVFLAPQI+A + R KIDMSNYP L R + YM AF+ A P
Sbjct: 338 LEGCDSKYATGDEVQLADVFLAPQIHAGVTRFKIDMSNYPLLERFYKAYMEILAFQVAAP 517
Query: 643 GKQPDAPSS 669
KQPDAP+S
Sbjct: 518 EKQPDAPAS 544
>gb|CD224945.1|CD224945 CCC1_37_B11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_37_B11_A007 3', mRNA sequence
Length = 408
Score = 113 bits (241), Expect = 4e-024
Identities = 47/69 (68%), Positives = 53/69 (76%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
L+GC KYATGDEVQLADVFLAPQI+A + R KIDMSNYP L R + YM AF+ A P
Sbjct: 83 LEGCDSKYATGDEVQLADVFLAPQIHAGVTRFKIDMSNYPLLERFYKAYMEILAFQVAAP 262
Query: 643 GKQPDAPSS 669
KQPDAP+S
Sbjct: 263 EKQPDAPAS 289
>gb|CL162282.1|CL162282 104_354_10806300_116_31831_204 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10806300, DNA
sequence
Length = 743
Score = 65.2 bits (136), Expect(2) = 1e-022
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +1 / -2
Query: 148 DPEFVKLNPMKFVPALVDGSSVIGDSYAITL 240
+ EFVKLNPMKFVPALVDG SVIGDSYAI L
Sbjct: 631 EAEFVKLNPMKFVPALVDGDSVIGDSYAIAL 539
Score = 62.5 bits (130), Expect(2) = 1e-022
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +1 / -2
Query: 241 YLEDKYPEPPLLPQDLQKKALNHQI 315
YLEDKYPEPPLLP DLQKKALNHQ+
Sbjct: 460 YLEDKYPEPPLLPHDLQKKALNHQV 386
>gb|BM324692.1|BM324692 PIC1_34_D06.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 499
Score = 62.5 bits (130), Expect(3) = 7e-022
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +1 / +3
Query: 34 MLYSYWRSSCSHRARIALNLKGVDYEYKAVN 126
+LY+ W SSCSHR RIALNLK VDYEYK+VN
Sbjct: 264 ILYNAWISSCSHRVRIALNLKSVDYEYKSVN 356
Score = 57.4 bits (119), Expect(3) = 7e-022
Identities = 20/36 (55%), Positives = 30/36 (83%)
Frame = +1 / +3
Query: 145 SDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLED 252
+DP + K+NP+K++PALVDG V+ +S AI+LYLE+
Sbjct: 363 TDPHYEKINPIKYIPALVDGDIVVSESLAISLYLEE 470
Score = 23.1 bits (44), Expect(3) = 7e-022
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +2
Query: 253 KYPEPPLLP 279
KYPE PLLP
Sbjct: 470 KYPEHPLLP 496
>gb|CW227269.1|CW227269 104_665_11205324_148_37225_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11205324, DNA
sequence
Length = 658
Score = 51.0 bits (105), Expect(3) = 3e-021
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +1 / -2
Query: 154 EFVKLNPMKFVPALVDGSSVIGDSYAITL 240
EF +LNP+K+VPALVDG +VI DS+AI L
Sbjct: 108 EFERLNPIKYVPALVDGDTVIADSFAILL 22
Score = 51.0 bits (105), Expect(3) = 3e-021
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +1 / -3
Query: 4 AEVEATVGRLMLYSYWRSSCSHRARIALNLKG 99
A V A +L LYS+WRSSCS R RIALNLKG
Sbjct: 464 AAVPAKNLKLKLYSFWRSSCSQRVRIALNLKG 369
Score = 38.6 bits (78), Expect(3) = 3e-021
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1 / -3
Query: 85 LNLKGVDYEYKAVNLLKGEQSDP 153
++ +G++YEYK VNLL EQSDP
Sbjct: 281 ISSQGLEYEYKPVNLLANEQSDP 213
>gb|CW479612.1|CW479612 fsbb001f238d13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f238d13, DNA
sequence
Length = 582
Score = 51.0 bits (105), Expect(3) = 3e-021
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +1 / +3
Query: 154 EFVKLNPMKFVPALVDGSSVIGDSYAITL 240
EF +LNP+K+VPALVDG +VI DS+AI L
Sbjct: 396 EFERLNPIKYVPALVDGDTVIADSFAILL 482
Score = 51.0 bits (105), Expect(3) = 3e-021
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +1 / +1
Query: 4 AEVEATVGRLMLYSYWRSSCSHRARIALNLKG 99
A V A +L LYS+WRSSCS R RIALNLKG
Sbjct: 40 AAVPAKNLKLKLYSFWRSSCSQRVRIALNLKG 135
Score = 38.6 bits (78), Expect(3) = 3e-021
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1 / +1
Query: 85 LNLKGVDYEYKAVNLLKGEQSDP 153
++ +G++YEYK VNLL EQSDP
Sbjct: 223 ISSQGLEYEYKPVNLLANEQSDP 291
>gb|CX617477.1|CX617477 GABR1_34_A10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_34_A10_A002 3', mRNA sequence
Length = 766
Score = 91.3 bits (193), Expect(2) = 4e-021
Identities = 38/52 (73%), Positives = 40/52 (76%)
Frame = +1 / +1
Query: 511 ADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALPGKQPDAPS 666
ADVFL PQIY I+R IDMS YP LARLH Y+ HPAF AALP KQPDAPS
Sbjct: 469 ADVFLEPQIYGGIKRFGIDMSAYPVLARLHEAYLEHPAFLAALPEKQPDAPS 624
Score = 34.1 bits (68), Expect(2) = 4e-021
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQL 510
LKGC+ KYATG+E+QL
Sbjct: 133 LKGCSTKYATGNEIQL 180
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,127,007,721
Number of Sequences: 832831
Number of extensions: 16924222
Number of successful extensions: 177673
Number of sequences better than 1.0e-020: 28
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 29259251048
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)