TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3802297.2.1
(606 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW328078.1|CW328078 104_824_11479103_148_35988_096 Sorgh... 268 1e-086
gb|BG411772.1|BG411772 OV2_37_H05.g1_A002 Ovary 2 (OV2) Sor... 268 1e-082
gb|BG240770.1|BG240770 OV1_38_A10.g1_A002 Ovary 1 (OV1) Sor... 268 2e-082
gb|BG412480.1|BG412480 OV2_34_H02.g1_A002 Ovary 2 (OV2) Sor... 268 3e-082
gb|CW192234.1|CW192234 104_614_11178915_148_36944_006 Sorgh... 268 7e-082
gb|BG049225.1|BG049225 OV1_17_B10.g1_A002 Ovary 1 (OV1) Sor... 264 2e-081
gb|BE918645.1|BE918645 FM1_2_G10.g1_A003 Floral-Induced Mer... 268 9e-081
gb|BG239895.1|BG239895 OV1_30_D03.g1_A002 Ovary 1 (OV1) Sor... 264 1e-072
gb|CW281479.1|CW281479 104_757_11408201_148_35459_077 Sorgh... 242 6e-068
gb|BG357676.1|BG357676 OV2_32_H07.g1_A002 Ovary 2 (OV2) Sor... 204 5e-064
gb|BG412481.1|BG412481 OV2_34_H03.g1_A002 Ovary 2 (OV2) Sor... 189 1e-057
gb|BG048275.1|BG048275 OV1_16_B07.g1_A002 Ovary 1 (OV1) Sor... 196 1e-055
gb|CW474162.1|CW474162 fsbb001f229n21k0 Sorghum methylation... 185 6e-046
gb|CW339305.1|CW339305 104_840_11485203_116_36138_016 Sorgh... 149 5e-035
gb|AW287387.2|AW287387 LG1_303_C07.b1_A002 Light Grown 1 (L... 149 5e-035
gb|CD203710.1|CD203710 HS1_1_D09.b1_A012 Heat-shocked seedl... 149 5e-035
gb|CD233006.1|CD233006 SS1_11_H04.b1_A012 Salt-stressed see... 149 5e-035
gb|CN125758.1|CN125758 RHOH1_13_D02.b1_A002 Acid- and alkal... 149 5e-035
gb|CX609223.1|CX609223 ANR1_11_H09.b1_A002 Anaerobic roots ... 149 5e-035
gb|CW107342.1|CW107342 104_477_11096531_116_34476_040 Sorgh... 118 1e-033
gb|CW221063.1|CW221063 104_656_11197697_148_37167_079 Sorgh... 133 4e-033
gb|CW355045.1|CW355045 fsbb001f019i07f0 Sorghum methylation... 130 3e-032
gb|CW276959.1|CW276959 104_750_11405768_116_35395_018 Sorgh... 123 4e-031
gb|CW441491.1|CW441491 fsbb001f160k16f0 Sorghum methylation... 128 8e-031
gb|CX608981.1|CX608981 ANR1_10_A01.b1_A002 Anaerobic roots ... 123 2e-030
gb|CD228200.1|CD228200 CCC1_6_B10.b1_A007 Callus culture/ce... 128 2e-030
gb|CW355046.1|CW355046 fsbb001f019i07k0 Sorghum methylation... 133 3e-030
gb|BE361683.1|BE361683 DG1_81_F09.g1_A002 Dark Grown 1 (DG1... 133 3e-030
gb|CN138851.1|CN138851 OX1_14_H09.b1_A002 Oxidatively-stres... 100 7e-030
gb|CD432457.1|CD432457 ETH1_30_A08.b1_A002 Ethylene-treated... 131 1e-029
gb|CW401835.1|CW401835 fsbb001f092n11k0 Sorghum methylation... 104 5e-029
gb|CW349542.1|CW349542 fsbb001f010h01f0 Sorghum methylation... 128 6e-029
gb|CX606104.1|CX606104 ANR1_1_D12.b1_A002 Anaerobic roots S... 105 1e-028
gb|CW172299.1|CW172299 104_583_11156215_148_36534_024 Sorgh... 105 1e-028
gb|CW266135.1|CW266135 104_735_11232263_148_35265_084 Sorgh... 126 3e-028
gb|CD203831.1|CD203831 HS1_2_G09.b1_A012 Heat-shocked seedl... 100 1e-026
gb|CW261863.1|CW261863 104_729_11229744_116_35210_094 Sorgh... 111 4e-026
gb|CD231524.1|CD231524 SS1_22_A05.b1_A012 Salt-stressed see... 117 1e-025
gb|CW112880.1|CW112880 104_486_11105136_116_34548_082 Sorgh... 112 5e-024
gb|CW432733.1|CW432733 fsbb001f147j17k0 Sorghum methylation... 76 2e-023
gb|CW405176.1|CW405176 fsbb001f097k01k0 Sorghum methylation... 70 5e-023
gb|CW155885.1|CW155885 104_558_11146378_148_36365_037 Sorgh... 100 3e-022
gb|CF486010.1|CF486010 POL1_35_D06.b1_A002 Pollen Sorghum b... 100 3e-022
gb|CW419545.1|CW419545 fsbb001f124h07k0 Sorghum methylation... 97 1e-021
gb|CW350958.1|CW350958 fsbb001f012i07k0 Sorghum methylation... 90 2e-021
gb|CW413647.1|CW413647 fsbb001f112o08k0 Sorghum methylation... 103 3e-021
gb|CW450958.1|CW450958 fsbb001f189n08k0 Sorghum methylation... 65 7e-021
gb|CW241950.1|CW241950 104_701_11219058_116_37554_073 Sorgh... 65 7e-021
>gb|CW328078.1|CW328078 104_824_11479103_148_35988_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479103, DNA
sequence
Length = 666
Score = 268 bits (580), Expect(3) = 8e-076
Identities = 104/123 (84%), Positives = 111/123 (90%)
Frame = +2 / +1
Query: 65 PHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVE 244
P E G+ RTFLGRPWKEHSRTLYIQSEIGGFIDP+GWLPWLGDFGLSTCYYA+VE
Sbjct: 163 PEFEKSAGDGKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVE 342
Query: 245 NHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGLLPQQQSGR 424
N G GA+ S+RVKWRG+KNITYQHA+QKYTVESFIQGQHWLPQLGVPFIPGLLPQ QSGR
Sbjct: 343 NRGAGADTSKRVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFIPGLLPQNQSGR 522
Query: 425 IH* 433
IH*
Sbjct: 523 IH* 531
Score = 247 bits (533), Expect(4) = 1e-086
Identities = 98/115 (85%), Positives = 101/115 (87%)
Frame = -1 / -2
Query: 432 QCILPDCCCGSSPGMNGTPSCGSQCWPWMKLSTVYFCIACW*VMFLIPLHFTRSLMLAPG 253
QCILPD CGSSPGMNGTPSCGSQCWPWMKLSTVYFC ACW*VMFL PLH TR L+ AP
Sbjct: 530 QCILPDWFCGSSPGMNGTPSCGSQCWPWMKLSTVYFCSACW*VMFLTPLHLTRLLVSAPA 351
Query: 252 PWFSTLA**QVLRPKSPSHGSQPCGSMNPPISDWM*SVRECSFHGRPRKVLNRPT 88
P FST A**QVLRPKSPSHGS P GSM PPISDWM*SVRECSFHGRPRKVL+ P+
Sbjct: 350 PRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPRKVLSLPS 186
Score = 198 bits (426), Expect(4) = 4e-054
Identities = 90/123 (73%), Positives = 92/123 (74%)
Frame = -3 / -1
Query: 433 SVYPARLLLRQQPRDEWHAELWEPVLALDEALDGVLLHRVLVGDVLDTPPLYAFAHVGAG 254
SVYPARL+LRQQPRDEWHAELWEPVLALDEAL GVLL RVLVGDVLD PPL A VGAG
Sbjct: 531 SVYPARLVLRQQPRDEWHAELWEPVLALDEALHGVLLQRVLVGDVLDAPPLDTLARVGAG 352
Query: 253 PVVLHLXXXXXXXXXXXEPRQPALRVDEPADLRLDVERARVLLPRAAQEGPEPADALLEL 74
P VLHL EPRQP L VDE DLRLDVERARVLLPR QEGPE A A L
Sbjct: 351 PAVLHLGVVAGAEAEVAEPRQPPLGVDEAPDLRLDVERARVLLPRPPQEGPELAVAGALL 172
Query: 73 RVR 65
+R
Sbjct: 171 ELR 163
Score = 164 bits (352), Expect(4) = 1e-060
Identities = 72/117 (61%), Positives = 77/117 (65%)
Frame = +1 / +3
Query: 88 RRPVQDLPGPPVEGALAHALHPVGDRRVHRPAGLAAVAXXXXXXXXXXXXGGEPRARRQH 267
RR QDLPG VEGALAHALHPVGDR +HRP G+AAVA GGEPR RR+H
Sbjct: 186 RRQAQDLPGAAVEGALAHALHPVGDRGLHRPQGVAAVARRLRPQHLLLRRGGEPRGRRRH 365
Query: 268 ERTRKVEGYQEHHLPARDAEVHRRELHPGPALAPTXXXXXXXXXXXXXXXXQDTLTS 438
E+ +VEG QEHHLPAR AEVHR ELHPGPALAPT QDTLTS
Sbjct: 366 EQACQVEGRQEHHLPARAAEVHRGELHPGPALAPTARRAIHPGAAAAEPVWQDTLTS 536
Score = 75.8 bits (159), Expect(4) = 1e-060
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = +1 / +3
Query: 1 GAGPQGEAVGGRHRHPQLHRRAAPGVREERR 93
GAGPQGE VGGRHRHPQLH RAAPGVREERR
Sbjct: 93 GAGPQGEEVGGRHRHPQLHHRAAPGVREERR 185
Score = 69.8 bits (146), Expect(4) = 1e-086
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = -1 / -2
Query: 102 LNRPTLFSNSGCGATVQLWMTVPPTDRLSLRPCA 1
L P LFSNSGCG+ VQLWMTVPP D LSLRPCA
Sbjct: 194 LPSPALFSNSGCGSMVQLWMTVPPADLLSLRPCA 93
Score = 35.0 bits (70), Expect(4) = 1e-086
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -1 / -1
Query: 606 PNSVHIS*FCTAFFYRI 556
PN++HIS*FCTAF ++I
Sbjct: 663 PNTMHIS*FCTAFLFQI 613
Score = 29.0 bits (57), Expect(3) = 8e-076
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 556 YSIKKCSTKLTNVNTVW 606
Y KKC +LTNV++VW
Sbjct: 613 YLKKKCRAELTNVHSVW 663
Score = 27.6 bits (54), Expect(4) = 1e-086
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / -1
Query: 508 PWYVHVSAT 482
PWYVHVSAT
Sbjct: 567 PWYVHVSAT 541
Score = 27.2 bits (53), Expect(4) = 1e-060
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3 / +3
Query: 552 FIFDKKMQYKIN*CEHCL 605
+IF+K+M +IN*C CL
Sbjct: 609 YIFEKEMPCRIN*CA*CL 662
Score = 26.7 bits (52), Expect(3) = 8e-076
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / +2
Query: 483 VALTCTYHG 509
VALTCTYHG
Sbjct: 542 VALTCTYHG 568
Score = 26.7 bits (52), Expect(4) = 4e-054
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2 / -2
Query: 605 QTVFTLVNFVLHFFIEY 555
QT+ TLVN HFF +Y
Sbjct: 662 QTLCTLVNSARHFFFKY 612
Score = 24.4 bits (47), Expect(4) = 1e-060
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / +3
Query: 484 WH*HVRTM 507
WH*HVRTM
Sbjct: 543 WH*HVRTM 566
Score = 22.6 bits (43), Expect(4) = 4e-054
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / -3
Query: 26 TASPCGPA 3
T+SPCGPA
Sbjct: 118 TSSPCGPA 95
Score = 22.1 bits (42), Expect(4) = 4e-054
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / -3
Query: 506 MVRTC*CHV 480
MVRTC CH+
Sbjct: 565 MVRTCQCHM 539
>gb|BG411772.1|BG411772 OV2_37_H05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 594
Score = 268 bits (580), Expect(2) = 3e-073
Identities = 104/123 (84%), Positives = 111/123 (90%)
Frame = +2 / +3
Query: 65 PHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVE 244
P E G+ RTFLGRPWKEHSRTLYIQSEIGGFIDP+GWLPWLGDFGLSTCYYA+VE
Sbjct: 123 PEFEKSAGDGKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVE 302
Query: 245 NHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGLLPQQQSGR 424
N G GA+ S+RVKWRG+KNITYQHA+QKYTVESFIQGQHWLPQLGVPFIPGLLPQ QSGR
Sbjct: 303 NRGAGADTSKRVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFIPGLLPQNQSGR 482
Query: 425 IH* 433
IH*
Sbjct: 483 IH* 491
Score = 247 bits (533), Expect(3) = 1e-082
Identities = 98/115 (85%), Positives = 101/115 (87%)
Frame = -1 / -3
Query: 432 QCILPDCCCGSSPGMNGTPSCGSQCWPWMKLSTVYFCIACW*VMFLIPLHFTRSLMLAPG 253
QCILPD CGSSPGMNGTPSCGSQCWPWMKLSTVYFC ACW*VMFL PLH TR L+ AP
Sbjct: 490 QCILPDWFCGSSPGMNGTPSCGSQCWPWMKLSTVYFCSACW*VMFLTPLHLTRLLVSAPA 311
Query: 252 PWFSTLA**QVLRPKSPSHGSQPCGSMNPPISDWM*SVRECSFHGRPRKVLNRPT 88
P FST A**QVLRPKSPSHGS P GSM PPISDWM*SVRECSFHGRPRKVL+ P+
Sbjct: 310 PRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPRKVLSLPS 146
Score = 198 bits (426), Expect(3) = 5e-052
Identities = 90/123 (73%), Positives = 92/123 (74%)
Frame = -3 / -2
Query: 433 SVYPARLLLRQQPRDEWHAELWEPVLALDEALDGVLLHRVLVGDVLDTPPLYAFAHVGAG 254
SVYPARL+LRQQPRDEWHAELWEPVLALDEAL GVLL RVLVGDVLD PPL A VGAG
Sbjct: 491 SVYPARLVLRQQPRDEWHAELWEPVLALDEALHGVLLQRVLVGDVLDAPPLDTLARVGAG 312
Query: 253 PVVLHLXXXXXXXXXXXEPRQPALRVDEPADLRLDVERARVLLPRAAQEGPEPADALLEL 74
P VLHL EPRQP L VDE DLRLDVERARVLLPR QEGPE A A L
Sbjct: 311 PAVLHLGVVAGAEAEVAEPRQPPLGVDEAPDLRLDVERARVLLPRPPQEGPELAVAGALL 132
Query: 73 RVR 65
+R
Sbjct: 131 ELR 123
Score = 164 bits (352), Expect(3) = 6e-058
Identities = 72/117 (61%), Positives = 77/117 (65%)
Frame = +1 / +2
Query: 88 RRPVQDLPGPPVEGALAHALHPVGDRRVHRPAGLAAVAXXXXXXXXXXXXGGEPRARRQH 267
RR QDLPG VEGALAHALHPVGDR +HRP G+AAVA GGEPR RR+H
Sbjct: 146 RRQAQDLPGAAVEGALAHALHPVGDRGLHRPQGVAAVARRLRPQHLLLRRGGEPRGRRRH 325
Query: 268 ERTRKVEGYQEHHLPARDAEVHRRELHPGPALAPTXXXXXXXXXXXXXXXXQDTLTS 438
E+ +VEG QEHHLPAR AEVHR ELHPGPALAPT QDTLTS
Sbjct: 326 EQACQVEGRQEHHLPARAAEVHRGELHPGPALAPTARRAIHPGAAAAEPVWQDTLTS 496
Score = 75.8 bits (159), Expect(3) = 6e-058
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = +1 / +2
Query: 1 GAGPQGEAVGGRHRHPQLHRRAAPGVREERR 93
GAGPQGE VGGRHRHPQLH RAAPGVREERR
Sbjct: 53 GAGPQGEEVGGRHRHPQLHHRAAPGVREERR 145
Score = 69.8 bits (146), Expect(3) = 1e-082
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = -1 / -3
Query: 102 LNRPTLFSNSGCGATVQLWMTVPPTDRLSLRPCA 1
L P LFSNSGCG+ VQLWMTVPP D LSLRPCA
Sbjct: 154 LPSPALFSNSGCGSMVQLWMTVPPADLLSLRPCA 53
Score = 30.4 bits (60), Expect(3) = 1e-082
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3 / -2
Query: 571 IFLSNIKKVVVKIA*TNQQTKPWYVHVSAT 482
+F + K V I + PWYVHVSAT
Sbjct: 590 LFFFKLYKHSVTIVLQPNKLNPWYVHVSAT 501
Score = 28.1 bits (55), Expect(2) = 3e-073
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3 / +1
Query: 483 VALTCTYHGLVCWLVYAILTTTFFIFDKK 569
VALTCTYHG I+T + KK
Sbjct: 502 VALTCTYHGFSLLGWSTIVTECLYNLKKK 588
Score = 24.4 bits (47), Expect(3) = 6e-058
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / +2
Query: 484 WH*HVRTM 507
WH*HVRTM
Sbjct: 503 WH*HVRTM 526
Score = 23.5 bits (45), Expect(3) = 5e-052
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2 / -1
Query: 542 SQNSINQPTN*TMVRTC*CHV 480
S NS MVRTC CH+
Sbjct: 561 SHNSTPTQQTKPMVRTCQCHM 499
Score = 22.6 bits (43), Expect(3) = 5e-052
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / -1
Query: 26 TASPCGPA 3
T+SPCGPA
Sbjct: 78 TSSPCGPA 55
>gb|BG240770.1|BG240770 OV1_38_A10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 268 bits (580), Expect(2) = 2e-073
Identities = 104/123 (84%), Positives = 111/123 (90%)
Frame = +2 / +3
Query: 65 PHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVE 244
P E G+ RTFLGRPWKEHSRTLYIQSEIGGFIDP+GWLPWLGDFGLSTCYYA+VE
Sbjct: 120 PEFEKSAGDGKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVE 299
Query: 245 NHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGLLPQQQSGR 424
N G GA+ S+RVKWRG+KNITYQHA+QKYTVESFIQGQHWLPQLGVPFIPGLLPQ QSGR
Sbjct: 300 NRGAGADTSKRVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFIPGLLPQNQSGR 479
Query: 425 IH* 433
IH*
Sbjct: 480 IH* 488
Score = 247 bits (533), Expect(3) = 2e-082
Identities = 98/115 (85%), Positives = 101/115 (87%)
Frame = -1 / -3
Query: 432 QCILPDCCCGSSPGMNGTPSCGSQCWPWMKLSTVYFCIACW*VMFLIPLHFTRSLMLAPG 253
QCILPD CGSSPGMNGTPSCGSQCWPWMKLSTVYFC ACW*VMFL PLH TR L+ AP
Sbjct: 487 QCILPDWFCGSSPGMNGTPSCGSQCWPWMKLSTVYFCSACW*VMFLTPLHLTRLLVSAPA 308
Query: 252 PWFSTLA**QVLRPKSPSHGSQPCGSMNPPISDWM*SVRECSFHGRPRKVLNRPT 88
P FST A**QVLRPKSPSHGS P GSM PPISDWM*SVRECSFHGRPRKVL+ P+
Sbjct: 307 PRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPRKVLSLPS 143
Score = 198 bits (426), Expect(3) = 1e-052
Identities = 90/123 (73%), Positives = 92/123 (74%)
Frame = -3 / -2
Query: 433 SVYPARLLLRQQPRDEWHAELWEPVLALDEALDGVLLHRVLVGDVLDTPPLYAFAHVGAG 254
SVYPARL+LRQQPRDEWHAELWEPVLALDEAL GVLL RVLVGDVLD PPL A VGAG
Sbjct: 488 SVYPARLVLRQQPRDEWHAELWEPVLALDEALHGVLLQRVLVGDVLDAPPLDTLARVGAG 309
Query: 253 PVVLHLXXXXXXXXXXXEPRQPALRVDEPADLRLDVERARVLLPRAAQEGPEPADALLEL 74
P VLHL EPRQP L VDE DLRLDVERARVLLPR QEGPE A A L
Sbjct: 308 PAVLHLGVVAGAEAEVAEPRQPPLGVDEAPDLRLDVERARVLLPRPPQEGPELAVAGALL 129
Query: 73 RVR 65
+R
Sbjct: 128 ELR 120
Score = 164 bits (352), Expect(3) = 6e-058
Identities = 72/117 (61%), Positives = 77/117 (65%)
Frame = +1 / +2
Query: 88 RRPVQDLPGPPVEGALAHALHPVGDRRVHRPAGLAAVAXXXXXXXXXXXXGGEPRARRQH 267
RR QDLPG VEGALAHALHPVGDR +HRP G+AAVA GGEPR RR+H
Sbjct: 143 RRQAQDLPGAAVEGALAHALHPVGDRGLHRPQGVAAVARRLRPQHLLLRRGGEPRGRRRH 322
Query: 268 ERTRKVEGYQEHHLPARDAEVHRRELHPGPALAPTXXXXXXXXXXXXXXXXQDTLTS 438
E+ +VEG QEHHLPAR AEVHR ELHPGPALAPT QDTLTS
Sbjct: 323 EQACQVEGRQEHHLPARAAEVHRGELHPGPALAPTARRAIHPGAAAAEPVWQDTLTS 493
Score = 75.8 bits (159), Expect(3) = 6e-058
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = +1 / +2
Query: 1 GAGPQGEAVGGRHRHPQLHRRAAPGVREERR 93
GAGPQGE VGGRHRHPQLH RAAPGVREERR
Sbjct: 50 GAGPQGEEVGGRHRHPQLHHRAAPGVREERR 142
Score = 69.8 bits (146), Expect(3) = 2e-082
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = -1 / -3
Query: 102 LNRPTLFSNSGCGATVQLWMTVPPTDRLSLRPCA 1
L P LFSNSGCG+ VQLWMTVPP D LSLRPCA
Sbjct: 151 LPSPALFSNSGCGSMVQLWMTVPPADLLSLRPCA 50
Score = 29.9 bits (59), Expect(3) = 2e-082
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -3 / -3
Query: 508 PWYVHVSATSYRQRSLP 458
PWYVHVSA RQ LP
Sbjct: 523 PWYVHVSAHVARQCILP 473
Score = 28.6 bits (56), Expect(2) = 2e-073
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3 / +3
Query: 459 GRLRCRYDVALTCTYHG 509
GR+ R ALTCTYHG
Sbjct: 474 GRIH*RATWALTCTYHG 524
Score = 25.8 bits (50), Expect(3) = 1e-052
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1 / -1
Query: 507 HGTYMLVPRHIDNAACRS 454
HGTYM VP + + +C++
Sbjct: 522 HGTYMSVPMSLVSVSCQT 469
Score = 24.4 bits (47), Expect(3) = 6e-058
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2 / +2
Query: 461 QAALSI*RGTNMYVPW 508
Q L+ GT+MYVPW
Sbjct: 476 QDTLTSDMGTDMYVPW 523
Score = 22.6 bits (43), Expect(3) = 1e-052
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / -1
Query: 26 TASPCGPA 3
T+SPCGPA
Sbjct: 75 TSSPCGPA 52
>gb|BG412480.1|BG412480 OV2_34_H02.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 506
Score = 268 bits (579), Expect(3) = 3e-082
Identities = 102/114 (89%), Positives = 109/114 (95%)
Frame = +2 / +2
Query: 92 GRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMS 271
G+ RTFLGRPWKEHSRTLYIQSEIGGFIDP+GWLPWLGDFGLSTCYYA+VEN G GA+ S
Sbjct: 68 GKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTS 247
Query: 272 ERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGLLPQQQSGRIH* 433
+RVKWRG+KNITYQHA+QKYTVESFIQGQHWLPQLGVPFIPGLLPQ QSGRIH*
Sbjct: 248 KRVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFIPGLLPQNQSGRIH* 409
Score = 247 bits (533), Expect(3) = 3e-076
Identities = 98/115 (85%), Positives = 101/115 (87%)
Frame = -1 / -3
Query: 432 QCILPDCCCGSSPGMNGTPSCGSQCWPWMKLSTVYFCIACW*VMFLIPLHFTRSLMLAPG 253
QCILPD CGSSPGMNGTPSCGSQCWPWMKLSTVYFC ACW*VMFL PLH TR L+ AP
Sbjct: 408 QCILPDWFCGSSPGMNGTPSCGSQCWPWMKLSTVYFCSACW*VMFLTPLHLTRLLVSAPA 229
Query: 252 PWFSTLA**QVLRPKSPSHGSQPCGSMNPPISDWM*SVRECSFHGRPRKVLNRPT 88
P FST A**QVLRPKSPSHGS P GSM PPISDWM*SVRECSFHGRPRKVL+ P+
Sbjct: 228 PRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPRKVLSLPS 64
Score = 197 bits (424), Expect(3) = 3e-055
Identities = 88/116 (75%), Positives = 89/116 (76%)
Frame = -3 / -2
Query: 433 SVYPARLLLRQQPRDEWHAELWEPVLALDEALDGVLLHRVLVGDVLDTPPLYAFAHVGAG 254
SVYPARL+LRQQPRDEWHAELWEPVLALDEAL GVLL RVLVGDVLD PPL A VGAG
Sbjct: 409 SVYPARLVLRQQPRDEWHAELWEPVLALDEALHGVLLQRVLVGDVLDAPPLDTLARVGAG 230
Query: 253 PVVLHLXXXXXXXXXXXEPRQPALRVDEPADLRLDVERARVLLPRAAQEGPEPADA 86
P VLHL EPRQP L VDE DLRLDVERARVLLPR QEGPE A A
Sbjct: 229 PAVLHLGVVAGAEAEVAEPRQPPLGVDEAPDLRLDVERARVLLPRPPQEGPELAVA 62
Score = 164 bits (352), Expect(3) = 6e-050
Identities = 72/117 (61%), Positives = 77/117 (65%)
Frame = +1 / +1
Query: 88 RRPVQDLPGPPVEGALAHALHPVGDRRVHRPAGLAAVAXXXXXXXXXXXXGGEPRARRQH 267
RR QDLPG VEGALAHALHPVGDR +HRP G+AAVA GGEPR RR+H
Sbjct: 64 RRQAQDLPGAAVEGALAHALHPVGDRGLHRPQGVAAVARRLRPQHLLLRRGGEPRGRRRH 243
Query: 268 ERTRKVEGYQEHHLPARDAEVHRRELHPGPALAPTXXXXXXXXXXXXXXXXQDTLTS 438
E+ +VEG QEHHLPAR AEVHR ELHPGPALAPT QDTLTS
Sbjct: 244 EQACQVEGRQEHHLPARAAEVHRGELHPGPALAPTARRAIHPGAAAAEPVWQDTLTS 414
Score = 51.0 bits (105), Expect(3) = 3e-076
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -1 / -3
Query: 102 LNRPTLFSNSGCGATVQLWMTVPP 31
L P LFSNSGCG+ VQLWMTVPP
Sbjct: 72 LPSPALFSNSGCGSMVQLWMTVPP 1
Score = 51.0 bits (105), Expect(3) = 3e-082
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +1 / +1
Query: 31 GRHRHPQLHRRAAPGVREERR 93
GRHRHPQLH RAAP VREERR
Sbjct: 1 GRHRHPQLHHRAAPAVREERR 63
Score = 48.7 bits (100), Expect(3) = 6e-050
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2 / +2
Query: 32 GGTVIHNCTVAPHPEFEKSVG 94
GGTVIHNCT+ PHP FEKS G
Sbjct: 2 GGTVIHNCTIEPHPLFEKSAG 64
Score = 35.9 bits (72), Expect(3) = 3e-055
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -3 / -2
Query: 94 ADALLELRVRRDGAVVDDG 38
A ALLE RVR DGAVVDDG
Sbjct: 64 AGALLEQRVRLDGAVVDDG 8
Score = 27.6 bits (54), Expect(3) = 3e-076
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / -2
Query: 508 PWYVHVSAT 482
PWYVHVSAT
Sbjct: 445 PWYVHVSAT 419
Score = 26.7 bits (52), Expect(3) = 3e-082
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / +3
Query: 483 VALTCTYHG 509
VALTCTYHG
Sbjct: 420 VALTCTYHG 446
Score = 24.4 bits (47), Expect(3) = 6e-050
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / +1
Query: 484 WH*HVRTM 507
WH*HVRTM
Sbjct: 421 WH*HVRTM 444
Score = 22.1 bits (42), Expect(3) = 3e-055
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / -1
Query: 506 MVRTC*CHV 480
MVRTC CH+
Sbjct: 443 MVRTCQCHM 417
>gb|CW192234.1|CW192234 104_614_11178915_148_36944_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11178915, DNA
sequence
Length = 655
Score = 268 bits (580), Expect(2) = 8e-073
Identities = 104/123 (84%), Positives = 111/123 (90%)
Frame = +2 / -2
Query: 65 PHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVE 244
P E G+ RTFLGRPWKEHSRTLYIQSEIGGFIDP+GWLPWLGDFGLSTCYYA+VE
Sbjct: 438 PEFEKSAGDGKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVE 259
Query: 245 NHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGLLPQQQSGR 424
N G GA+ S+RVKWRG+KNITYQHA+QKYTVESFIQGQHWLPQLGVPFIPGLLPQ QSGR
Sbjct: 258 NRGAGADTSKRVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFIPGLLPQNQSGR 79
Query: 425 IH* 433
IH*
Sbjct: 78 IH* 70
Score = 247 bits (533), Expect(3) = 7e-082
Identities = 98/115 (85%), Positives = 101/115 (87%)
Frame = -1 / +2
Query: 432 QCILPDCCCGSSPGMNGTPSCGSQCWPWMKLSTVYFCIACW*VMFLIPLHFTRSLMLAPG 253
QCILPD CGSSPGMNGTPSCGSQCWPWMKLSTVYFC ACW*VMFL PLH TR L+ AP
Sbjct: 71 QCILPDWFCGSSPGMNGTPSCGSQCWPWMKLSTVYFCSACW*VMFLTPLHLTRLLVSAPA 250
Query: 252 PWFSTLA**QVLRPKSPSHGSQPCGSMNPPISDWM*SVRECSFHGRPRKVLNRPT 88
P FST A**QVLRPKSPSHGS P GSM PPISDWM*SVRECSFHGRPRKVL+ P+
Sbjct: 251 PRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPRKVLSLPS 415
Score = 198 bits (426), Expect(3) = 1e-051
Identities = 90/123 (73%), Positives = 92/123 (74%)
Frame = -3 / +1
Query: 433 SVYPARLLLRQQPRDEWHAELWEPVLALDEALDGVLLHRVLVGDVLDTPPLYAFAHVGAG 254
SVYPARL+LRQQPRDEWHAELWEPVLALDEAL GVLL RVLVGDVLD PPL A VGAG
Sbjct: 70 SVYPARLVLRQQPRDEWHAELWEPVLALDEALHGVLLQRVLVGDVLDAPPLDTLARVGAG 249
Query: 253 PVVLHLXXXXXXXXXXXEPRQPALRVDEPADLRLDVERARVLLPRAAQEGPEPADALLEL 74
P VLHL EPRQP L VDE DLRLDVERARVLLPR QEGPE A A L
Sbjct: 250 PAVLHLGVVAGAEAEVAEPRQPPLGVDEAPDLRLDVERARVLLPRPPQEGPELAVAGALL 429
Query: 73 RVR 65
+R
Sbjct: 430 ELR 438
Score = 164 bits (352), Expect(3) = 6e-058
Identities = 72/117 (61%), Positives = 77/117 (65%)
Frame = +1 / -1
Query: 88 RRPVQDLPGPPVEGALAHALHPVGDRRVHRPAGLAAVAXXXXXXXXXXXXGGEPRARRQH 267
RR QDLPG VEGALAHALHPVGDR +HRP G+AAVA GGEPR RR+H
Sbjct: 415 RRQAQDLPGAAVEGALAHALHPVGDRGLHRPQGVAAVARRLRPQHLLLRRGGEPRGRRRH 236
Query: 268 ERTRKVEGYQEHHLPARDAEVHRRELHPGPALAPTXXXXXXXXXXXXXXXXQDTLTS 438
E+ +VEG QEHHLPAR AEVHR ELHPGPALAPT QDTLTS
Sbjct: 235 EQACQVEGRQEHHLPARAAEVHRGELHPGPALAPTARRAIHPGAAAAEPVWQDTLTS 65
Score = 75.8 bits (159), Expect(3) = 6e-058
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = +1 / -1
Query: 1 GAGPQGEAVGGRHRHPQLHRRAAPGVREERR 93
GAGPQGE VGGRHRHPQLH RAAPGVREERR
Sbjct: 508 GAGPQGEEVGGRHRHPQLHHRAAPGVREERR 416
Score = 69.8 bits (146), Expect(3) = 7e-082
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = -1 / +2
Query: 102 LNRPTLFSNSGCGATVQLWMTVPPTDRLSLRPCA 1
L P LFSNSGCG+ VQLWMTVPP D LSLRPCA
Sbjct: 407 LPSPALFSNSGCGSMVQLWMTVPPADLLSLRPCA 508
Score = 27.6 bits (54), Expect(3) = 7e-082
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / +1
Query: 508 PWYVHVSAT 482
PWYVHVSAT
Sbjct: 34 PWYVHVSAT 60
Score = 26.7 bits (52), Expect(2) = 8e-073
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -3
Query: 483 VALTCTYHG 509
VALTCTYHG
Sbjct: 59 VALTCTYHG 33
Score = 24.4 bits (47), Expect(3) = 6e-058
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / -1
Query: 484 WH*HVRTM 507
WH*HVRTM
Sbjct: 58 WH*HVRTM 35
Score = 22.6 bits (43), Expect(3) = 1e-051
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / +3
Query: 26 TASPCGPA 3
T+SPCGPA
Sbjct: 483 TSSPCGPA 506
Score = 22.1 bits (42), Expect(3) = 1e-051
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / +3
Query: 506 MVRTC*CHV 480
MVRTC CH+
Sbjct: 36 MVRTCQCHM 62
>gb|BG049225.1|BG049225 OV1_17_B10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 661
Score = 264 bits (570), Expect(2) = 5e-072
Identities = 103/123 (83%), Positives = 110/123 (89%)
Frame = +2 / +3
Query: 65 PHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVE 244
P E G+ RTFLGRPWKEHSRTLYIQSEIGGFIDP+GWLPWLGDFGLSTCYYA+VE
Sbjct: 228 PEFEKSAGDGKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVE 407
Query: 245 NHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGLLPQQQSGR 424
N G GA+ S+RVKWRG+KNITYQHA+QKYTVESFIQGQHWLPQLGVPFI GLLPQ QSGR
Sbjct: 408 NRGAGADTSKRVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFILGLLPQNQSGR 587
Query: 425 IH* 433
IH*
Sbjct: 588 IH* 596
Score = 243 bits (525), Expect(3) = 2e-081
Identities = 97/115 (84%), Positives = 100/115 (86%)
Frame = -1 / -1
Query: 432 QCILPDCCCGSSPGMNGTPSCGSQCWPWMKLSTVYFCIACW*VMFLIPLHFTRSLMLAPG 253
QCILPD CGSSP MNGTPSCGSQCWPWMKLSTVYFC ACW*VMFL PLH TR L+ AP
Sbjct: 595 QCILPDWFCGSSPRMNGTPSCGSQCWPWMKLSTVYFCSACW*VMFLTPLHLTRLLVSAPA 416
Query: 252 PWFSTLA**QVLRPKSPSHGSQPCGSMNPPISDWM*SVRECSFHGRPRKVLNRPT 88
P FST A**QVLRPKSPSHGS P GSM PPISDWM*SVRECSFHGRPRKVL+ P+
Sbjct: 415 PRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPRKVLSLPS 251
Score = 196 bits (422), Expect(3) = 4e-052
Identities = 89/123 (72%), Positives = 92/123 (74%)
Frame = -3 / -3
Query: 433 SVYPARLLLRQQPRDEWHAELWEPVLALDEALDGVLLHRVLVGDVLDTPPLYAFAHVGAG 254
SVYPARL+LRQQP+DEWHAELWEPVLALDEAL GVLL RVLVGDVLD PPL A VGAG
Sbjct: 596 SVYPARLVLRQQPQDEWHAELWEPVLALDEALHGVLLQRVLVGDVLDAPPLDTLARVGAG 417
Query: 253 PVVLHLXXXXXXXXXXXEPRQPALRVDEPADLRLDVERARVLLPRAAQEGPEPADALLEL 74
P VLHL EPRQP L VDE DLRLDVERARVLLPR QEGPE A A L
Sbjct: 416 PAVLHLGVVAGAEAEVAEPRQPPLGVDEAPDLRLDVERARVLLPRPPQEGPELAVAGALL 237
Query: 73 RVR 65
+R
Sbjct: 236 ELR 228
Score = 164 bits (352), Expect(3) = 6e-058
Identities = 72/117 (61%), Positives = 77/117 (65%)
Frame = +1 / +2
Query: 88 RRPVQDLPGPPVEGALAHALHPVGDRRVHRPAGLAAVAXXXXXXXXXXXXGGEPRARRQH 267
RR QDLPG VEGALAHALHPVGDR +HRP G+AAVA GGEPR RR+H
Sbjct: 251 RRQAQDLPGAAVEGALAHALHPVGDRGLHRPQGVAAVARRLRPQHLLLRRGGEPRGRRRH 430
Query: 268 ERTRKVEGYQEHHLPARDAEVHRRELHPGPALAPTXXXXXXXXXXXXXXXXQDTLTS 438
E+ +VEG QEHHLPAR AEVHR ELHPGPALAPT QDTLTS
Sbjct: 431 EQACQVEGRQEHHLPARAAEVHRGELHPGPALAPTARRAIHPGAAAAEPVWQDTLTS 601
Score = 75.8 bits (159), Expect(3) = 6e-058
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = +1 / +2
Query: 1 GAGPQGEAVGGRHRHPQLHRRAAPGVREERR 93
GAGPQGE VGGRHRHPQLH RAAPGVREERR
Sbjct: 158 GAGPQGEEVGGRHRHPQLHHRAAPGVREERR 250
Score = 69.8 bits (146), Expect(3) = 2e-081
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = -1 / -1
Query: 102 LNRPTLFSNSGCGATVQLWMTVPPTDRLSLRPCA 1
L P LFSNSGCG+ VQLWMTVPP D LSLRPCA
Sbjct: 259 LPSPALFSNSGCGSMVQLWMTVPPADLLSLRPCA 158
Score = 29.9 bits (59), Expect(3) = 2e-081
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -3 / -1
Query: 508 PWYVHVSATSYRQRSLP 458
PWYVHVSA RQ LP
Sbjct: 631 PWYVHVSAHVARQCILP 581
Score = 28.6 bits (56), Expect(2) = 5e-072
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3 / +3
Query: 459 GRLRCRYDVALTCTYHG 509
GR+ R ALTCTYHG
Sbjct: 582 GRIH*RATWALTCTYHG 632
Score = 25.8 bits (50), Expect(3) = 4e-052
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1 / -2
Query: 507 HGTYMLVPRHIDNAACRS 454
HGTYM VP + + +C++
Sbjct: 630 HGTYMSVPMSLVSVSCQT 577
Score = 24.4 bits (47), Expect(3) = 6e-058
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2 / +2
Query: 461 QAALSI*RGTNMYVPW 508
Q L+ GT+MYVPW
Sbjct: 584 QDTLTSDMGTDMYVPW 631
Score = 22.6 bits (43), Expect(3) = 4e-052
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / -2
Query: 26 TASPCGPA 3
T+SPCGPA
Sbjct: 183 TSSPCGPA 160
>gb|BE918645.1|BE918645 FM1_2_G10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 564
Score = 268 bits (580), Expect(2) = 3e-073
Identities = 104/123 (84%), Positives = 111/123 (90%)
Frame = +2 / +2
Query: 65 PHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVE 244
P E G+ RTFLGRPWKEHSRTLYIQSEIGGFIDP+GWLPWLGDFGLSTCYYA+VE
Sbjct: 107 PEFEKSAGDGKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVE 286
Query: 245 NHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGLLPQQQSGR 424
N G GA+ S+RVKWRG+KNITYQHA+QKYTVESFIQGQHWLPQLGVPFIPGLLPQ QSGR
Sbjct: 287 NRGAGADTSKRVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFIPGLLPQNQSGR 466
Query: 425 IH* 433
IH*
Sbjct: 467 IH* 475
Score = 247 bits (533), Expect(3) = 9e-081
Identities = 98/115 (85%), Positives = 101/115 (87%)
Frame = -1 / -1
Query: 432 QCILPDCCCGSSPGMNGTPSCGSQCWPWMKLSTVYFCIACW*VMFLIPLHFTRSLMLAPG 253
QCILPD CGSSPGMNGTPSCGSQCWPWMKLSTVYFC ACW*VMFL PLH TR L+ AP
Sbjct: 474 QCILPDWFCGSSPGMNGTPSCGSQCWPWMKLSTVYFCSACW*VMFLTPLHLTRLLVSAPA 295
Query: 252 PWFSTLA**QVLRPKSPSHGSQPCGSMNPPISDWM*SVRECSFHGRPRKVLNRPT 88
P FST A**QVLRPKSPSHGS P GSM PPISDWM*SVRECSFHGRPRKVL+ P+
Sbjct: 294 PRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPRKVLSLPS 130
Score = 198 bits (426), Expect(3) = 2e-052
Identities = 90/123 (73%), Positives = 92/123 (74%)
Frame = -3 / -3
Query: 433 SVYPARLLLRQQPRDEWHAELWEPVLALDEALDGVLLHRVLVGDVLDTPPLYAFAHVGAG 254
SVYPARL+LRQQPRDEWHAELWEPVLALDEAL GVLL RVLVGDVLD PPL A VGAG
Sbjct: 475 SVYPARLVLRQQPRDEWHAELWEPVLALDEALHGVLLQRVLVGDVLDAPPLDTLARVGAG 296
Query: 253 PVVLHLXXXXXXXXXXXEPRQPALRVDEPADLRLDVERARVLLPRAAQEGPEPADALLEL 74
P VLHL EPRQP L VDE DLRLDVERARVLLPR QEGPE A A L
Sbjct: 295 PAVLHLGVVAGAEAEVAEPRQPPLGVDEAPDLRLDVERARVLLPRPPQEGPELAVAGALL 116
Query: 73 RVR 65
+R
Sbjct: 115 ELR 107
Score = 164 bits (352), Expect(3) = 6e-058
Identities = 72/117 (61%), Positives = 77/117 (65%)
Frame = +1 / +1
Query: 88 RRPVQDLPGPPVEGALAHALHPVGDRRVHRPAGLAAVAXXXXXXXXXXXXGGEPRARRQH 267
RR QDLPG VEGALAHALHPVGDR +HRP G+AAVA GGEPR RR+H
Sbjct: 130 RRQAQDLPGAAVEGALAHALHPVGDRGLHRPQGVAAVARRLRPQHLLLRRGGEPRGRRRH 309
Query: 268 ERTRKVEGYQEHHLPARDAEVHRRELHPGPALAPTXXXXXXXXXXXXXXXXQDTLTS 438
E+ +VEG QEHHLPAR AEVHR ELHPGPALAPT QDTLTS
Sbjct: 310 EQACQVEGRQEHHLPARAAEVHRGELHPGPALAPTARRAIHPGAAAAEPVWQDTLTS 480
Score = 75.8 bits (159), Expect(3) = 6e-058
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = +1 / +1
Query: 1 GAGPQGEAVGGRHRHPQLHRRAAPGVREERR 93
GAGPQGE VGGRHRHPQLH RAAPGVREERR
Sbjct: 37 GAGPQGEEVGGRHRHPQLHHRAAPGVREERR 129
Score = 66.1 bits (138), Expect(3) = 9e-081
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = -1 / -1
Query: 102 LNRPTLFSNSGCGATVQLWMTVPPTDRLSLRPCA 1
L P LFSNSGCG+ VQLWMTVPP D LSLR CA
Sbjct: 138 LPSPALFSNSGCGSMVQLWMTVPPADLLSLRACA 37
Score = 28.1 bits (55), Expect(2) = 3e-073
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3 / +3
Query: 483 VALTCTYHGLVCWLVYAILTTTFFI 557
VALTCTYHG I+T + I
Sbjct: 486 VALTCTYHGFSLLGWRTIVTAVYII 560
Score = 27.6 bits (54), Expect(3) = 9e-081
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / -3
Query: 508 PWYVHVSAT 482
PWYVHVSAT
Sbjct: 511 PWYVHVSAT 485
Score = 25.4 bits (49), Expect(3) = 2e-052
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2 / -2
Query: 548 SSSQNSINQPTN*TMVRTC*CHV 480
+SS NS MVRTC CH+
Sbjct: 551 NSSHNSSPTQQTKPMVRTCQCHM 483
Score = 24.4 bits (47), Expect(3) = 6e-058
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / +1
Query: 484 WH*HVRTM 507
WH*HVRTM
Sbjct: 487 WH*HVRTM 510
Score = 22.6 bits (43), Expect(3) = 2e-052
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / -2
Query: 26 TASPCGPA 3
T+SPCGPA
Sbjct: 62 TSSPCGPA 39
>gb|BG239895.1|BG239895 OV1_30_D03.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 455
Score = 264 bits (570), Expect(2) = 5e-072
Identities = 103/123 (83%), Positives = 110/123 (89%)
Frame = +2 / +3
Query: 65 PHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVE 244
P E G+ RTFLGRPWKEHSRTLYIQSEIGGFIDP+GWLPWLGDFGLSTCYYA+VE
Sbjct: 30 PEFEKSAGDGKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVE 209
Query: 245 NHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGLLPQQQSGR 424
N G GA+ S+RVKWRG+KNITYQHA+QKYTVESFIQGQHWLPQLGVPFI GLLPQ QSGR
Sbjct: 210 NRGAGADTSKRVKWRGVKNITYQHALQKYTVESFIQGQHWLPQLGVPFILGLLPQNQSGR 389
Query: 425 IH* 433
IH*
Sbjct: 390 IH* 398
Score = 243 bits (525), Expect(3) = 1e-072
Identities = 97/115 (84%), Positives = 100/115 (86%)
Frame = -1 / -2
Query: 432 QCILPDCCCGSSPGMNGTPSCGSQCWPWMKLSTVYFCIACW*VMFLIPLHFTRSLMLAPG 253
QCILPD CGSSP MNGTPSCGSQCWPWMKLSTVYFC ACW*VMFL PLH TR L+ AP
Sbjct: 397 QCILPDWFCGSSPRMNGTPSCGSQCWPWMKLSTVYFCSACW*VMFLTPLHLTRLLVSAPA 218
Query: 252 PWFSTLA**QVLRPKSPSHGSQPCGSMNPPISDWM*SVRECSFHGRPRKVLNRPT 88
P FST A**QVLRPKSPSHGS P GSM PPISDWM*SVRECSFHGRPRKVL+ P+
Sbjct: 217 PRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSFHGRPRKVLSLPS 53
Score = 196 bits (422), Expect(2) = 7e-051
Identities = 89/123 (72%), Positives = 92/123 (74%)
Frame = -3 / -1
Query: 433 SVYPARLLLRQQPRDEWHAELWEPVLALDEALDGVLLHRVLVGDVLDTPPLYAFAHVGAG 254
SVYPARL+LRQQP+DEWHAELWEPVLALDEAL GVLL RVLVGDVLD PPL A VGAG
Sbjct: 398 SVYPARLVLRQQPQDEWHAELWEPVLALDEALHGVLLQRVLVGDVLDAPPLDTLARVGAG 219
Query: 253 PVVLHLXXXXXXXXXXXEPRQPALRVDEPADLRLDVERARVLLPRAAQEGPEPADALLEL 74
P VLHL EPRQP L VDE DLRLDVERARVLLPR QEGPE A A L
Sbjct: 218 PAVLHLGVVAGAEAEVAEPRQPPLGVDEAPDLRLDVERARVLLPRPPQEGPELAVAGALL 39
Query: 73 RVR 65
+R
Sbjct: 38 ELR 30
Score = 164 bits (352), Expect(3) = 3e-048
Identities = 72/117 (61%), Positives = 77/117 (65%)
Frame = +1 / +2
Query: 88 RRPVQDLPGPPVEGALAHALHPVGDRRVHRPAGLAAVAXXXXXXXXXXXXGGEPRARRQH 267
RR QDLPG VEGALAHALHPVGDR +HRP G+AAVA GGEPR RR+H
Sbjct: 53 RRQAQDLPGAAVEGALAHALHPVGDRGLHRPQGVAAVARRLRPQHLLLRRGGEPRGRRRH 232
Query: 268 ERTRKVEGYQEHHLPARDAEVHRRELHPGPALAPTXXXXXXXXXXXXXXXXQDTLTS 438
E+ +VEG QEHHLPAR AEVHR ELHPGPALAPT QDTLTS
Sbjct: 233 EQACQVEGRQEHHLPARAAEVHRGELHPGPALAPTARRAIHPGAAAAEPVWQDTLTS 403
Score = 42.8 bits (87), Expect(3) = 3e-048
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +1 / +2
Query: 43 HPQLHRRAAPGVREERR 93
HPQLH RAAPGVREERR
Sbjct: 2 HPQLHHRAAPGVREERR 52
Score = 40.5 bits (82), Expect(3) = 1e-072
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -1 / -2
Query: 102 LNRPTLFSNSGCGATVQLWM 43
L P LFSNSGCG+ VQLWM
Sbjct: 61 LPSPALFSNSGCGSMVQLWM 2
Score = 29.9 bits (59), Expect(3) = 1e-072
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -3 / -2
Query: 508 PWYVHVSATSYRQRSLP 458
PWYVHVSA RQ LP
Sbjct: 433 PWYVHVSAHVARQCILP 383
Score = 28.6 bits (56), Expect(2) = 5e-072
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3 / +3
Query: 459 GRLRCRYDVALTCTYHG 509
GR+ R ALTCTYHG
Sbjct: 384 GRIH*RATWALTCTYHG 434
Score = 25.8 bits (50), Expect(2) = 7e-051
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1 / -3
Query: 507 HGTYMLVPRHIDNAACRS 454
HGTYM VP + + +C++
Sbjct: 432 HGTYMSVPMSLVSVSCQT 379
Score = 24.4 bits (47), Expect(3) = 3e-048
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2 / +2
Query: 461 QAALSI*RGTNMYVPW 508
Q L+ GT+MYVPW
Sbjct: 386 QDTLTSDMGTDMYVPW 433
>gb|CW281479.1|CW281479 104_757_11408201_148_35459_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11408201, DNA
sequence
Length = 593
Score = 242 bits (522), Expect(3) = 6e-068
Identities = 93/103 (90%), Positives = 99/103 (96%)
Frame = +2 / -1
Query: 125 KEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNI 304
KEHSRTLYIQSEIGGFIDP+GWLPWLGDFGLSTCYYA+VEN G GA+ S+RVKWRG+KNI
Sbjct: 587 KEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVENRGAGADTSKRVKWRGVKNI 408
Query: 305 TYQHAMQKYTVESFIQGQHWLPQLGVPFIPGLLPQQQSGRIH* 433
TYQHA+QKYTVESFIQGQHWLPQLGVPFIPGLLPQ QSGRIH*
Sbjct: 407 TYQHALQKYTVESFIQGQHWLPQLGVPFIPGLLPQNQSGRIH* 279
Score = 223 bits (482), Expect(3) = 2e-064
Identities = 89/103 (86%), Positives = 90/103 (87%)
Frame = -1 / +1
Query: 432 QCILPDCCCGSSPGMNGTPSCGSQCWPWMKLSTVYFCIACW*VMFLIPLHFTRSLMLAPG 253
QCILPD CGSSPGMNGTPSCGSQCWPWMKLSTVYFC ACW*VMFL PLH TR L+ AP
Sbjct: 280 QCILPDWFCGSSPGMNGTPSCGSQCWPWMKLSTVYFCSACW*VMFLTPLHLTRLLVSAPA 459
Query: 252 PWFSTLA**QVLRPKSPSHGSQPCGSMNPPISDWM*SVRECSF 124
P FST A**QVLRPKSPSHGS P GSM PPISDWM*SVRECSF
Sbjct: 460 PRFSTSA**QVLRPKSPSHGSHPLGSMKPPISDWM*SVRECSF 588
Score = 178 bits (384), Expect(3) = 4e-047
Identities = 79/103 (76%), Positives = 80/103 (77%)
Frame = -3 / +3
Query: 433 SVYPARLLLRQQPRDEWHAELWEPVLALDEALDGVLLHRVLVGDVLDTPPLYAFAHVGAG 254
SVYPARL+LRQQPRDEWHAELWEPVLALDEAL GVLL RVLVGDVLD PPL A VGAG
Sbjct: 279 SVYPARLVLRQQPRDEWHAELWEPVLALDEALHGVLLQRVLVGDVLDAPPLDTLARVGAG 458
Query: 253 PVVLHLXXXXXXXXXXXEPRQPALRVDEPADLRLDVERARVLL 125
P VLHL EPRQP L VDE DLRLDVERARVLL
Sbjct: 459 PAVLHLGVVAGAEAEVAEPRQPPLGVDEAPDLRLDVERARVLL 587
Score = 146 bits (313), Expect(3) = 3e-038
Identities = 64/105 (60%), Positives = 69/105 (65%)
Frame = +1 / -3
Query: 124 EGALAHALHPVGDRRVHRPAGLAAVAXXXXXXXXXXXXGGEPRARRQHERTRKVEGYQEH 303
EGALAHALHPVGDR +HRP G+AAVA GGEPR RR+HE+ +VEG QEH
Sbjct: 588 EGALAHALHPVGDRGLHRPQGVAAVARRLRPQHLLLRRGGEPRGRRRHEQACQVEGRQEH 409
Query: 304 HLPARDAEVHRRELHPGPALAPTXXXXXXXXXXXXXXXXQDTLTS 438
HLPAR AEVHR ELHPGPALAPT QDTLTS
Sbjct: 408 HLPARAAEVHRGELHPGPALAPTARRAIHPGAAAAEPVWQDTLTS 274
Score = 35.0 bits (70), Expect(3) = 2e-064
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -1 / +3
Query: 606 PNSVHIS*FCTAFFYRI 556
PN++HIS*FCTAF ++I
Sbjct: 147 PNTMHIS*FCTAFLFQI 197
Score = 29.0 bits (57), Expect(3) = 6e-068
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1 / -1
Query: 556 YSIKKCSTKLTNVNTVW 606
Y KKC +LTNV++VW
Sbjct: 197 YLKKKCRAELTNVHSVW 147
Score = 27.6 bits (54), Expect(3) = 2e-064
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / +3
Query: 508 PWYVHVSAT 482
PWYVHVSAT
Sbjct: 243 PWYVHVSAT 269
Score = 27.2 bits (53), Expect(3) = 3e-038
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 552 FIFDKKMQYKIN*CEHCL 605
+IF+K+M +IN*C CL
Sbjct: 201 YIFEKEMPCRIN*CA*CL 148
Score = 26.7 bits (52), Expect(3) = 6e-068
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -2
Query: 483 VALTCTYHG 509
VALTCTYHG
Sbjct: 268 VALTCTYHG 242
Score = 26.7 bits (52), Expect(3) = 4e-047
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2 / +1
Query: 605 QTVFTLVNFVLHFFIEY 555
QT+ TLVN HFF +Y
Sbjct: 148 QTLCTLVNSARHFFFKY 198
Score = 24.4 bits (47), Expect(3) = 3e-038
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / -3
Query: 484 WH*HVRTM 507
WH*HVRTM
Sbjct: 267 WH*HVRTM 244
Score = 22.1 bits (42), Expect(3) = 4e-047
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / +2
Query: 506 MVRTC*CHV 480
MVRTC CH+
Sbjct: 245 MVRTCQCHM 271
>gb|BG357676.1|BG357676 OV2_32_H07.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 653
Score = 204 bits (440), Expect(2) = 5e-064
Identities = 75/114 (65%), Positives = 96/114 (84%)
Frame = +2 / +1
Query: 92 GRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMS 271
G+ T+L RPWKE+SRTLYIQ++IGGFIDP+GWL W GDFGL T +YA+V+N G GA+MS
Sbjct: 136 GKIATYLARPWKEYSRTLYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGAGADMS 315
Query: 272 ERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGLLPQQQSGRIH* 433
+R KW GIK +TY+ A +++TVE+FIQGQ ++P+ GVPFIPGLLPQ+Q GR H*
Sbjct: 316 KRAKWGGIKTVTYEEAQKEFTVETFIQGQQFIPKWGVPFIPGLLPQEQQGRTH* 477
Score = 153 bits (329), Expect(2) = 3e-045
Identities = 69/114 (60%), Positives = 74/114 (64%)
Frame = -1 / -1
Query: 432 QCILPDCCCGSSPGMNGTPSCGSQCWPWMKLSTVYFCIACW*VMFLIPLHFTRSLMLAPG 253
QC+LP C CGS+PGMNGTP G C PWMK+STV A *V L+P H R LM AP
Sbjct: 476 QCVLPCCSCGSNPGMNGTPHFGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPA 297
Query: 252 PWFSTLA**QVLRPKSPSHGSQPCGSMNPPISDWM*SVRECSFHGRPRKVLNRP 91
P ST A* V RPKSP H S P GSM PP+S WM*SVRE SFHG R V P
Sbjct: 296 PRLSTSA*KSVSRPKSPFHSSHPLGSMKPPMSFWM*SVREYSFHGLAR*VAILP 135
Score = 124 bits (266), Expect(2) = 1e-029
Identities = 60/114 (52%), Positives = 71/114 (62%)
Frame = -3 / -3
Query: 433 SVYPARLLLRQQPRDEWHAELWEPVLALDEALDGVLLHRVLVGDVLDTPPLYAFAHVGAG 254
SV P+ LLLRQQ R EWH LW+ +L+LDE LDG LL R+LVGD LD PL A AHVGAG
Sbjct: 477 SVRPSLLLLRQQSRYEWHPPLWDELLSLDEGLDGELLLRLLVGDGLDAAPLGALAHVGAG 298
Query: 253 PVVLHLXXXXXXXXXXXEPRQPALRVDEPADLRLDVERARVLLPRAAQEGPEPA 92
V+ L P +P+L VDE D+ LDVER VLLP + G + A
Sbjct: 297 ASVVDLGVEERLEAEVAVPLEPSLGVDEAPDVVLDVERPGVLLPWPGEVGGDLA 136
Score = 61.6 bits (128), Expect(2) = 5e-064
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = +2 / +1
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVG 94
AQGR+++RSVGGTV+HNCT+ PHP+F+ G
Sbjct: 43 AQGRRDKRSVGGTVLHNCTIEPHPDFKADAG 135
Score = 49.6 bits (102), Expect(2) = 3e-045
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -1 / -1
Query: 93 PTLFSNSGCGATVQLWMTVPPTDRLSLRPCA 1
P SGCG+ VQL TVPPT+RLS RPCA
Sbjct: 134 PASALKSGCGSMVQLCSTVPPTERLSRRPCA 42
Score = 26.3 bits (51), Expect(2) = 1e-029
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -3 / -3
Query: 82 LELRVRRDGAVVDDG 38
LE+RVR DGAVV G
Sbjct: 123 LEVRVRLDGAVVQHG 79
>gb|BG412481.1|BG412481 OV2_34_H03.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 420
Score = 189 bits (407), Expect(2) = 1e-048
Identities = 73/92 (79%), Positives = 80/92 (86%)
Frame = +2 / +3
Query: 65 PHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVE 244
P E G+ RTFLGRPWKEHSRTLYIQSEIGGFIDP+GWLPWLGDFGLSTC YA+VE
Sbjct: 117 PEFEKSAGDGKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTC*YAEVE 296
Query: 245 NHGPGANMSERVKWRGIKNITYQHAMQKYTVE 340
N G GA+ S+RVKWRG+KNITYQHA+QKYTVE
Sbjct: 297 NRGAGADTSKRVKWRGVKNITYQHALQKYTVE 392
Score = 164 bits (352), Expect(3) = 1e-057
Identities = 68/84 (80%), Positives = 71/84 (84%)
Frame = -1 / -3
Query: 339 STVYFCIACW*VMFLIPLHFTRSLMLAPGPWFSTLA**QVLRPKSPSHGSQPCGSMNPPI 160
STVYFC ACW*VMFL PLH TR L+ AP P FST A *QVLRPKSPSHGS P GSM PPI
Sbjct: 391 STVYFCSACW*VMFLTPLHLTRLLVSAPAPRFSTSAY*QVLRPKSPSHGSHPLGSMKPPI 212
Query: 159 SDWM*SVRECSFHGRPRKVLNRPT 88
SDWM*SVRECSFHGRPRKVL+ P+
Sbjct: 211 SDWM*SVRECSFHGRPRKVLSLPS 140
Score = 129 bits (277), Expect(3) = 2e-047
Identities = 55/83 (66%), Positives = 60/83 (72%)
Frame = +1 / +2
Query: 88 RRPVQDLPGPPVEGALAHALHPVGDRRVHRPAGLAAVAXXXXXXXXXXXXGGEPRARRQH 267
RR QDLPG VEGALAHALHPVGDR +HRP G+AAVA GGEPR RR+H
Sbjct: 140 RRQAQDLPGAAVEGALAHALHPVGDRGLHRPQGVAAVARRLRPQHLLVRRGGEPRGRRRH 319
Query: 268 ERTRKVEGYQEHHLPARDAEVHR 336
E+ +VEG QEHHLPAR AEVHR
Sbjct: 320 EQACQVEGRQEHHLPARAAEVHR 388
Score = 122 bits (262), Expect(3) = 2e-029
Identities = 60/92 (65%), Positives = 61/92 (66%)
Frame = -3 / -2
Query: 340 LDGVLLHRVLVGDVLDTPPLYAFAHVGAGPVVLHLXXXXXXXXXXXEPRQPALRVDEPAD 161
L GVLL RVLVGDVLD PPL A VGAGP VLHL EPRQP L VDE D
Sbjct: 392 LHGVLLQRVLVGDVLDAPPLDTLARVGAGPAVLHLGVLAGAEAEVAEPRQPPLGVDEAPD 213
Query: 160 LRLDVERARVLLPRAAQEGPEPADALLELRVR 65
LRLDVERARVLLPR QEGPE A A L +R
Sbjct: 212 LRLDVERARVLLPRPPQEGPELAVAGALLELR 117
Score = 75.8 bits (159), Expect(3) = 2e-047
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = +1 / +2
Query: 1 GAGPQGEAVGGRHRHPQLHRRAAPGVREERR 93
GAGPQGE VGGRHRHPQLH RAAPGVREERR
Sbjct: 47 GAGPQGEEVGGRHRHPQLHHRAAPGVREERR 139
Score = 69.8 bits (146), Expect(3) = 1e-057
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = -1 / -3
Query: 102 LNRPTLFSNSGCGATVQLWMTVPPTDRLSLRPCA 1
L P LFSNSGCG+ VQLWMTVPP D LSLRPCA
Sbjct: 148 LPSPALFSNSGCGSMVQLWMTVPPADLLSLRPCA 47
Score = 29.0 bits (57), Expect(3) = 1e-057
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1 / -2
Query: 366 SQCWPWMK 343
SQCWPWMK
Sbjct: 419 SQCWPWMK 396
Score = 25.4 bits (49), Expect(2) = 1e-048
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / +1
Query: 344 FIQGQHWL 367
FIQGQHWL
Sbjct: 397 FIQGQHWL 420
Score = 23.1 bits (44), Expect(3) = 2e-047
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / +3
Query: 343 LHPGPALA 366
LHPGPALA
Sbjct: 396 LHPGPALA 419
Score = 22.6 bits (43), Expect(3) = 2e-029
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / -1
Query: 26 TASPCGPA 3
T+SPCGPA
Sbjct: 72 TSSPCGPA 49
Score = 22.6 bits (43), Expect(3) = 2e-029
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / -1
Query: 367 EPVLALDEA 341
EPVLALDEA
Sbjct: 420 EPVLALDEA 394
>gb|BG048275.1|BG048275 OV1_16_B07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 196 bits (422), Expect = 3e-049
Identities = 75/93 (80%), Positives = 82/93 (88%)
Frame = +2 / +1
Query: 65 PHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVE 244
P E G+ RTFLGRPWKEHSRTLYIQSEIGGFIDP+GWLPWLGDFGLSTCYYA+VE
Sbjct: 235 PEFEKSAGDGKLRTFLGRPWKEHSRTLYIQSEIGGFIDPKGWLPWLGDFGLSTCYYAEVE 414
Query: 245 NHGPGANMSERVKWRGIKNITYQHAMQKYTVES 343
N G GA+ S+RVKWRG+KNITYQHA+QKYTVES
Sbjct: 415 NRGAGADTSKRVKWRGVKNITYQHALQKYTVES 513
Score = 168 bits (361), Expect(2) = 1e-055
Identities = 70/85 (82%), Positives = 73/85 (85%)
Frame = -1 / -2
Query: 342 LSTVYFCIACW*VMFLIPLHFTRSLMLAPGPWFSTLA**QVLRPKSPSHGSQPCGSMNPP 163
LSTVYFC ACW*VMFL PLH TR L+ AP P FST A**QVLRPKSPSHGS P GSM PP
Sbjct: 512 LSTVYFCSACW*VMFLTPLHLTRLLVSAPAPRFSTSA**QVLRPKSPSHGSHPLGSMKPP 333
Query: 162 ISDWM*SVRECSFHGRPRKVLNRPT 88
ISDWM*SVRECSFHGRPRKVL+ P+
Sbjct: 332 ISDWM*SVRECSFHGRPRKVLSLPS 258
Score = 131 bits (280), Expect(2) = 2e-046
Identities = 56/85 (65%), Positives = 61/85 (71%)
Frame = +1 / +3
Query: 88 RRPVQDLPGPPVEGALAHALHPVGDRRVHRPAGLAAVAXXXXXXXXXXXXGGEPRARRQH 267
RR QDLPG VEGALAHALHPVGDR +HRP G+AAVA GGEPR RR+H
Sbjct: 258 RRQAQDLPGAAVEGALAHALHPVGDRGLHRPQGVAAVARRLRPQHLLLRRGGEPRGRRRH 437
Query: 268 ERTRKVEGYQEHHLPARDAEVHRRE 342
E+ +VEG QEHHLPAR AEVHR E
Sbjct: 438 EQACQVEGRQEHHLPARAAEVHRGE 512
Score = 124 bits (266), Expect(2) = 1e-028
Identities = 61/93 (65%), Positives = 62/93 (66%)
Frame = -3 / -1
Query: 343 ALDGVLLHRVLVGDVLDTPPLYAFAHVGAGPVVLHLXXXXXXXXXXXEPRQPALRVDEPA 164
AL GVLL RVLVGDVLD PPL A VGAGP VLHL EPRQP L VDE
Sbjct: 513 ALHGVLLQRVLVGDVLDAPPLDTLARVGAGPAVLHLGVVAGAEAEVAEPRQPPLGVDEAP 334
Query: 163 DLRLDVERARVLLPRAAQEGPEPADALLELRVR 65
DLRLDVERARVLLPR QEGPE A A L +R
Sbjct: 333 DLRLDVERARVLLPRPPQEGPELAVAGALLELR 235
Score = 75.8 bits (159), Expect(2) = 2e-046
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = +1 / +3
Query: 1 GAGPQGEAVGGRHRHPQLHRRAAPGVREERR 93
GAGPQGE VGGRHRHPQLH RAAPGVREERR
Sbjct: 165 GAGPQGEEVGGRHRHPQLHHRAAPGVREERR 257
Score = 69.8 bits (146), Expect(2) = 1e-055
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = -1 / -2
Query: 102 LNRPTLFSNSGCGATVQLWMTVPPTDRLSLRPCA 1
L P LFSNSGCG+ VQLWMTVPP D LSLRPCA
Sbjct: 266 LPSPALFSNSGCGSMVQLWMTVPPADLLSLRPCA 165
Score = 22.6 bits (43), Expect(2) = 1e-028
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / -3
Query: 26 TASPCGPA 3
T+SPCGPA
Sbjct: 190 TSSPCGPA 167
>gb|CW474162.1|CW474162 fsbb001f229n21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f229n21, DNA
sequence
Length = 496
Score = 185 bits (398), Expect = 6e-046
Identities = 69/103 (66%), Positives = 88/103 (85%)
Frame = +2 / -2
Query: 125 KEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNI 304
KE+SRTLYIQ++IGGFIDP+GWL W GDFGL T +YA+V+N G GA+MS+R KW GIK +
Sbjct: 495 KEYSRTLYIQNDIGGFIDPKGWLEWNGDFGLETLFYAEVDNRGAGADMSKRAKWGGIKTV 316
Query: 305 TYQHAMQKYTVESFIQGQHWLPQLGVPFIPGLLPQQQSGRIH* 433
TY+ A +++TVE+FIQGQ ++P+ GVPFIPGLLPQ+Q GR H*
Sbjct: 315 TYEEAQKEFTVETFIQGQQFIPKWGVPFIPGLLPQEQQGRTH* 187
Score = 145 bits (312), Expect = 4e-034
Identities = 64/103 (62%), Positives = 69/103 (66%)
Frame = -1 / +2
Query: 432 QCILPDCCCGSSPGMNGTPSCGSQCWPWMKLSTVYFCIACW*VMFLIPLHFTRSLMLAPG 253
QC+LP C CGS+PGMNGTP G C PWMK+STV A *V L+P H R LM AP
Sbjct: 188 QCVLPCCSCGSNPGMNGTPHFGMNCCPWMKVSTVNSFCASS*VTVLMPPHLARLLMSAPA 367
Query: 252 PWFSTLA**QVLRPKSPSHGSQPCGSMNPPISDWM*SVRECSF 124
P ST A* V RPKSP H S P GSM PP+S WM*SVRE SF
Sbjct: 368 PRLSTSA*KSVSRPKSPFHSSHPLGSMKPPMSFWM*SVREYSF 496
Score = 120 bits (256), Expect = 2e-026
Identities = 57/103 (55%), Positives = 66/103 (64%)
Frame = -3 / +1
Query: 433 SVYPARLLLRQQPRDEWHAELWEPVLALDEALDGVLLHRVLVGDVLDTPPLYAFAHVGAG 254
SV P+ LLLRQQ R EWH LW+ +L+LDE LDG LL R+LVGD LD PL A AHVGAG
Sbjct: 187 SVRPSLLLLRQQSRYEWHPPLWDELLSLDEGLDGELLLRLLVGDGLDAAPLGALAHVGAG 366
Query: 253 PVVLHLXXXXXXXXXXXEPRQPALRVDEPADLRLDVERARVLL 125
V+ L P +P+L VDE D+ LDVER VLL
Sbjct: 367 ASVVDLGVEERLEAEVAVPLEPSLGVDEAPDVVLDVERPGVLL 495
>gb|CW339305.1|CW339305 104_840_11485203_116_36138_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485203, DNA
sequence
Length = 626
Score = 149 bits (319), Expect = 5e-035
Identities = 61/133 (45%), Positives = 79/133 (59%)
Frame = +2 / -2
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR++ G IH C VA + +S +T+LGRPWK++SRT+++QSE+ I P
Sbjct: 463 AQGREDPNQNTGISIHRCKVAAAADLLQSSSSTKTYLGRPWKQYSRTVFLQSELDSLIAP 284
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GWL W G+F L T YY + N GPGA S RVKW+G + IT +TV SFI G
Sbjct: 283 AGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSAAEASAFTVGSFIDGDV 104
Query: 362 WLPQLGVPFIPGL 400
WL +PF GL
Sbjct: 103 WLAGTSIPFTTGL 65
Score = 103 bits (219), Expect = 3e-021
Identities = 59/136 (43%), Positives = 67/136 (49%)
Frame = -1 / +3
Query: 408 CGSSPGMNGTPSCGSQCWPWMKLSTVYFCIACW*VMFLIPLHFTRSLMLAPGPWFSTLA* 229
C P + G SQ P MK TV + VM P H TR + APGP F *
Sbjct: 57 CAHKPVVKGMDVPASQTSPSMKEPTVNALASAALVMTRYPFHLTRPEVPAPGPVFMYSP* 236
Query: 228 *QVLRPKSPSHGSQPCGSMNPPISDWM*SVRECSFHGRPRKVLNRPTLFSNSGCGATVQL 49
* V K PSH SQP G+M+ SD +VRE FHGRPR VL S S AT+Q
Sbjct: 237 *SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VLVEEEDCSRSAAAATLQR 416
Query: 48 WMTVPPTDRLSLRPCA 1
WM +P S RPCA
Sbjct: 417 WMEMPVFWLGSSRPCA 464
>gb|AW287387.2|AW287387 LG1_303_C07.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 490
Score = 149 bits (319), Expect = 5e-035
Identities = 61/133 (45%), Positives = 79/133 (59%)
Frame = +2 / +1
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR++ G IH C VA + +S +T+LGRPWK++SRT+++QSE+ I P
Sbjct: 37 AQGREDPNQNTGISIHRCKVAAAADLLQSSSSTKTYLGRPWKQYSRTVFLQSELDSLIAP 216
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GWL W G+F L T YY + N GPGA S RVKW+G + IT +TV SFI G
Sbjct: 217 AGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSAAEASAFTVGSFIDGDV 396
Query: 362 WLPQLGVPFIPGL 400
WL +PF GL
Sbjct: 397 WLAGTSIPFTTGL 435
Score = 103 bits (219), Expect = 3e-021
Identities = 59/136 (43%), Positives = 67/136 (49%)
Frame = -1 / -3
Query: 408 CGSSPGMNGTPSCGSQCWPWMKLSTVYFCIACW*VMFLIPLHFTRSLMLAPGPWFSTLA* 229
C P + G SQ P MK TV + VM P H TR + APGP F *
Sbjct: 443 CAHKPVVKGMDVPASQTSPSMKEPTVNALASAALVMTRYPFHLTRPEVPAPGPVFMYSP* 264
Query: 228 *QVLRPKSPSHGSQPCGSMNPPISDWM*SVRECSFHGRPRKVLNRPTLFSNSGCGATVQL 49
* V K PSH SQP G+M+ SD +VRE FHGRPR VL S S AT+Q
Sbjct: 263 *SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VLVEEEDCSRSAAAATLQR 84
Query: 48 WMTVPPTDRLSLRPCA 1
WM +P S RPCA
Sbjct: 83 WMEMPVFWLGSSRPCA 36
>gb|CD203710.1|CD203710 HS1_1_D09.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_1_D09_A012 3', mRNA sequence
Length = 654
Score = 149 bits (319), Expect = 5e-035
Identities = 61/133 (45%), Positives = 79/133 (59%)
Frame = +2 / +2
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR++ G IH C VA + +S +T+LGRPWK++SRT+++QSE+ I P
Sbjct: 65 AQGREDPNQNTGISIHRCKVAAAADLLQSSSSTKTYLGRPWKQYSRTVFLQSELDSLIAP 244
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GWL W G+F L T YY + N GPGA S RVKW+G + IT +TV SFI G
Sbjct: 245 AGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSAAEASAFTVGSFIDGDV 424
Query: 362 WLPQLGVPFIPGL 400
WL +PF GL
Sbjct: 425 WLAGTSIPFTTGL 463
Score = 103 bits (219), Expect = 3e-021
Identities = 59/136 (43%), Positives = 67/136 (49%)
Frame = -1 / -1
Query: 408 CGSSPGMNGTPSCGSQCWPWMKLSTVYFCIACW*VMFLIPLHFTRSLMLAPGPWFSTLA* 229
C P + G SQ P MK TV + VM P H TR + APGP F *
Sbjct: 471 CAHKPVVKGMDVPASQTSPSMKEPTVNALASAALVMTRYPFHLTRPEVPAPGPVFMYSP* 292
Query: 228 *QVLRPKSPSHGSQPCGSMNPPISDWM*SVRECSFHGRPRKVLNRPTLFSNSGCGATVQL 49
* V K PSH SQP G+M+ SD +VRE FHGRPR VL S S AT+Q
Sbjct: 291 *SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VLVEEEDCSRSAAAATLQR 112
Query: 48 WMTVPPTDRLSLRPCA 1
WM +P S RPCA
Sbjct: 111 WMEMPVFWLGSSRPCA 64
>gb|CD233006.1|CD233006 SS1_11_H04.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_11_H04_A012 3', mRNA sequence
Length = 635
Score = 149 bits (319), Expect = 5e-035
Identities = 61/133 (45%), Positives = 79/133 (59%)
Frame = +2 / +1
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR++ G IH C VA + +S +T+LGRPWK++SRT+++QSE+ I P
Sbjct: 46 AQGREDPNQNTGISIHRCKVAAAADLLQSSSSTKTYLGRPWKQYSRTVFLQSELDSLIAP 225
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GWL W G+F L T YY + N GPGA S RVKW+G + IT +TV SFI G
Sbjct: 226 AGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSAAEASAFTVGSFIDGDV 405
Query: 362 WLPQLGVPFIPGL 400
WL +PF GL
Sbjct: 406 WLAGTSIPFTTGL 444
Score = 103 bits (219), Expect = 3e-021
Identities = 59/136 (43%), Positives = 67/136 (49%)
Frame = -1 / -1
Query: 408 CGSSPGMNGTPSCGSQCWPWMKLSTVYFCIACW*VMFLIPLHFTRSLMLAPGPWFSTLA* 229
C P + G SQ P MK TV + VM P H TR + APGP F *
Sbjct: 452 CAHKPVVKGMDVPASQTSPSMKEPTVNALASAALVMTRYPFHLTRPEVPAPGPVFMYSP* 273
Query: 228 *QVLRPKSPSHGSQPCGSMNPPISDWM*SVRECSFHGRPRKVLNRPTLFSNSGCGATVQL 49
* V K PSH SQP G+M+ SD +VRE FHGRPR VL S S AT+Q
Sbjct: 272 *SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VLVEEEDCSRSAAAATLQR 93
Query: 48 WMTVPPTDRLSLRPCA 1
WM +P S RPCA
Sbjct: 92 WMEMPVFWLGSSRPCA 45
>gb|CN125758.1|CN125758 RHOH1_13_D02.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_13_D02_A002 3', mRNA sequence
Length = 689
Score = 149 bits (319), Expect = 5e-035
Identities = 61/133 (45%), Positives = 79/133 (59%)
Frame = +2 / +3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR++ G IH C VA + +S +T+LGRPWK++SRT+++QSE+ I P
Sbjct: 63 AQGREDPNQNTGISIHRCKVAAAADLLQSSSSTKTYLGRPWKQYSRTVFLQSELDSLIAP 242
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GWL W G+F L T YY + N GPGA S RVKW+G + IT +TV SFI G
Sbjct: 243 AGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSAAEASAFTVGSFIDGDV 422
Query: 362 WLPQLGVPFIPGL 400
WL +PF GL
Sbjct: 423 WLAGTSIPFTTGL 461
Score = 103 bits (219), Expect = 3e-021
Identities = 59/136 (43%), Positives = 67/136 (49%)
Frame = -1 / -2
Query: 408 CGSSPGMNGTPSCGSQCWPWMKLSTVYFCIACW*VMFLIPLHFTRSLMLAPGPWFSTLA* 229
C P + G SQ P MK TV + VM P H TR + APGP F *
Sbjct: 469 CAHKPVVKGMDVPASQTSPSMKEPTVNALASAALVMTRYPFHLTRPEVPAPGPVFMYSP* 290
Query: 228 *QVLRPKSPSHGSQPCGSMNPPISDWM*SVRECSFHGRPRKVLNRPTLFSNSGCGATVQL 49
* V K PSH SQP G+M+ SD +VRE FHGRPR VL S S AT+Q
Sbjct: 289 *SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VLVEEEDCSRSAAAATLQR 110
Query: 48 WMTVPPTDRLSLRPCA 1
WM +P S RPCA
Sbjct: 109 WMEMPVFWLGSSRPCA 62
>gb|CX609223.1|CX609223 ANR1_11_H09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_H09_A002 3', mRNA sequence
Length = 647
Score = 149 bits (319), Expect = 5e-035
Identities = 61/133 (45%), Positives = 79/133 (59%)
Frame = +2 / +2
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR++ G IH C VA + +S +T+LGRPWK++SRT+++QSE+ I P
Sbjct: 50 AQGREDPNQNTGISIHRCKVAAAADLLQSSSSTKTYLGRPWKQYSRTVFLQSELDSLIAP 229
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GWL W G+F L T YY + N GPGA S RVKW+G + IT +TV SFI G
Sbjct: 230 AGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSAAEASAFTVGSFIDGDV 409
Query: 362 WLPQLGVPFIPGL 400
WL +PF GL
Sbjct: 410 WLAGTSIPFTTGL 448
Score = 103 bits (219), Expect = 3e-021
Identities = 59/136 (43%), Positives = 67/136 (49%)
Frame = -1 / -3
Query: 408 CGSSPGMNGTPSCGSQCWPWMKLSTVYFCIACW*VMFLIPLHFTRSLMLAPGPWFSTLA* 229
C P + G SQ P MK TV + VM P H TR + APGP F *
Sbjct: 456 CAHKPVVKGMDVPASQTSPSMKEPTVNALASAALVMTRYPFHLTRPEVPAPGPVFMYSP* 277
Query: 228 *QVLRPKSPSHGSQPCGSMNPPISDWM*SVRECSFHGRPRKVLNRPTLFSNSGCGATVQL 49
* V K PSH SQP G+M+ SD +VRE FHGRPR VL S S AT+Q
Sbjct: 276 *SVSSAKLPSHSSQPAGAMSESSSDCRKTVREYCFHGRPR*VLVEEEDCSRSAAAATLQR 97
Query: 48 WMTVPPTDRLSLRPCA 1
WM +P S RPCA
Sbjct: 96 WMEMPVFWLGSSRPCA 49
>gb|CW107342.1|CW107342 104_477_11096531_116_34476_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11096531, DNA
sequence
Length = 385
Score = 118 bits (253), Expect(3) = 1e-033
Identities = 43/46 (93%), Positives = 43/46 (93%)
Frame = -1 / +1
Query: 432 QCILPDCCCGSSPGMNGTPSCGSQCWPWMKLSTVYFCIACW*VMFL 295
QCILPD CGSSPGMNGTPSCGSQCWPWMKLSTVYFC ACW*VMFL
Sbjct: 247 QCILPDWFCGSSPGMNGTPSCGSQCWPWMKLSTVYFCSACW*VMFL 384
Score = 112 bits (239), Expect(4) = 1e-030
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +2 / -3
Query: 296 KNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGLLPQQQSGRIH* 433
KNITYQHA+QKYTVESFIQGQHWLPQLGVPFIPGLLPQ QSGRIH*
Sbjct: 383 KNITYQHALQKYTVESFIQGQHWLPQLGVPFIPGLLPQNQSGRIH* 246
Score = 104 bits (222), Expect(3) = 2e-025
Identities = 43/46 (93%), Positives = 44/46 (95%)
Frame = -3 / +3
Query: 433 SVYPARLLLRQQPRDEWHAELWEPVLALDEALDGVLLHRVLVGDVL 296
SVYPARL+LRQQPRDEWHAELWEPVLALDEAL GVLL RVLVGDVL
Sbjct: 246 SVYPARLVLRQQPRDEWHAELWEPVLALDEALHGVLLQRVLVGDVL 383
Score = 35.0 bits (70), Expect(3) = 1e-033
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -1 / +3
Query: 606 PNSVHIS*FCTAFFYRI 556
PN++HIS*FCTAF ++I
Sbjct: 114 PNTMHIS*FCTAFLFQI 164
Score = 29.0 bits (57), Expect(4) = 1e-030
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1 / -3
Query: 556 YSIKKCSTKLTNVNTVW 606
Y KKC +LTNV++VW
Sbjct: 164 YLKKKCRAELTNVHSVW 114
Score = 27.6 bits (54), Expect(3) = 1e-033
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / +3
Query: 508 PWYVHVSAT 482
PWYVHVSAT
Sbjct: 210 PWYVHVSAT 236
Score = 26.7 bits (52), Expect(4) = 1e-030
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -1
Query: 483 VALTCTYHG 509
VALTCTYHG
Sbjct: 235 VALTCTYHG 209
Score = 26.7 bits (52), Expect(3) = 2e-025
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2 / +1
Query: 605 QTVFTLVNFVLHFFIEY 555
QT+ TLVN HFF +Y
Sbjct: 115 QTLCTLVNSARHFFFKY 165
Score = 22.1 bits (42), Expect(3) = 2e-025
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / +2
Query: 506 MVRTC*CHV 480
MVRTC CH+
Sbjct: 212 MVRTCQCHM 238
Score = 18.9 bits (35), Expect(4) = 1e-030
Identities = 5/6 (83%), Positives = 6/6 (100%)
Frame = +3 / -2
Query: 507 GLVCWL 524
GLVCW+
Sbjct: 210 GLVCWV 193
>gb|CW221063.1|CW221063 104_656_11197697_148_37167_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197697, DNA
sequence
Length = 667
Score = 133 bits (284), Expect(2) = 4e-033
Identities = 49/100 (49%), Positives = 65/100 (65%)
Frame = +2 / -2
Query: 104 TFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERVK 283
T+LGRPWK +SRT+ +QSE+ +DP GW+PW GD+ LST +YA+ N GPGA+ S RV
Sbjct: 474 TYLGRPWKLYSRTVIMQSEVDALVDPAGWMPWDGDYALSTLFYAEYNNSGPGADTSRRVA 295
Query: 284 WRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGLL 403
W G + +TV + + G WLPQ GVPF GL+
Sbjct: 294 WPGFHVLNGTADAANFTVGNMVLGDFWLPQTGVPFTSGLI 175
Score = 29.5 bits (58), Expect(2) = 4e-033
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2 / -2
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPE 76
AQGR + GT + CTVA PE
Sbjct: 579 AQGRTDPNQNTGTTLQGCTVAAAPE 505
>gb|CW355045.1|CW355045 fsbb001f019i07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f019i07, DNA
sequence
Length = 717
Score = 130 bits (278), Expect(2) = 3e-032
Identities = 48/98 (48%), Positives = 63/98 (64%)
Frame = +2 / +3
Query: 104 TFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERVK 283
T+LGRPWK +SRT+ +QSE+ +DP GW+PW GD+ LST +YA+ N GPGA+ S RV
Sbjct: 357 TYLGRPWKLYSRTVIMQSEVDALVDPAGWMPWDGDYALSTLFYAEYNNSGPGADTSRRVA 536
Query: 284 WRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPG 397
W G + +TV + + G WLPQ GVPF G
Sbjct: 537 WPGFHVLNGTADAANFTVGNMVLGDFWLPQTGVPFTSG 650
Score = 29.5 bits (58), Expect(2) = 3e-032
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2 / +3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPE 76
AQGR + GT + CTVA PE
Sbjct: 252 AQGRTDPNQNTGTTLQGCTVAAAPE 326
>gb|CW276959.1|CW276959 104_750_11405768_116_35395_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405768, DNA
sequence
Length = 617
Score = 123 bits (264), Expect(2) = 4e-031
Identities = 49/101 (48%), Positives = 64/101 (63%)
Frame = +2 / -2
Query: 98 FRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSER 277
F TFLGRPWK +SRT+ + S + +D +GWL W GDF L T +Y + +N GPGA + R
Sbjct: 397 FPTFLGRPWKAYSRTVVMLSYLDAHVDARGWLEWDGDFALKTLFYGEYQNEGPGAATAGR 218
Query: 278 VKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGL 400
V W G IT + ++TV FIQG +WL GVP+I GL
Sbjct: 217 VNWPGYHVITDRSVAVQFTVGQFIQGGNWLNGTGVPYIEGL 95
Score = 31.8 bits (63), Expect(2) = 4e-031
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2 / -2
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVG 94
AQGR++ GT +H C V P P+ G
Sbjct: 496 AQGREDPNQNTGTSLHRCRVVPAPDLAPVAG 404
>gb|CW441491.1|CW441491 fsbb001f160k16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f160k16, DNA
sequence
Length = 538
Score = 128 bits (275), Expect(2) = 8e-031
Identities = 48/100 (48%), Positives = 64/100 (64%)
Frame = +2 / -1
Query: 101 RTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERV 280
+T+LGRPWK++SR +++QS IG + P+GWL W GDF L T YY + N GPGA ++ RV
Sbjct: 331 QTYLGRPWKQYSRVVFMQSYIGDLVRPEGWLAWDGDFALDTLYYGEYSNTGPGAGVAARV 152
Query: 281 KWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGL 400
KW G +T +TV FI+G WLP GV + GL
Sbjct: 151 KWPGFHVMTSAAEAGNFTVAQFIEGNMWLPPTGVKYTAGL 32
Score = 25.8 bits (50), Expect(2) = 8e-031
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2 / -1
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPE 76
AQGR + G C V+ HPE
Sbjct: 460 AQGRLDANMTTGFAFQFCNVSAHPE 386
>gb|CX608981.1|CX608981 ANR1_10_A01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_10_A01_A002 3', mRNA sequence
Length = 599
Score = 123 bits (264), Expect(2) = 2e-030
Identities = 49/101 (48%), Positives = 64/101 (63%)
Frame = +2 / +1
Query: 98 FRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSER 277
F TFLGRPWK +SRT+ + S + +D +GWL W GDF L T +Y + +N GPGA + R
Sbjct: 172 FPTFLGRPWKAYSRTVVMLSYLDAHVDARGWLEWDGDFALKTLFYGEYQNEGPGAATAGR 351
Query: 278 VKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGL 400
V W G IT + ++TV FIQG +WL GVP+I GL
Sbjct: 352 VNWPGYHVITDRSVAVQFTVGQFIQGGNWLNGTGVPYIEGL 474
Score = 29.9 bits (59), Expect(2) = 2e-030
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2 / +1
Query: 5 QGRKERRSVGGTVIHNCTVAPHPEFEKSVG 94
QGR++ GT +H C V P P+ G
Sbjct: 76 QGREDPNQNTGTSLHRCRVVPAPDLAPVAG 165
>gb|CD228200.1|CD228200 CCC1_6_B10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_6_B10_A007 3', mRNA sequence
Length = 639
Score = 128 bits (274), Expect(2) = 2e-030
Identities = 49/100 (49%), Positives = 64/100 (64%)
Frame = +2 / +2
Query: 101 RTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERV 280
+T+LGRPWK++SRT+++QSE+ I P GWL W G+F L T YY + N GPGA S RV
Sbjct: 149 KTYLGRPWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRV 328
Query: 281 KWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGL 400
+W+G + IT +TV SFI G WL +PF GL
Sbjct: 329 RWKGYRVITSAAEASAFTVGSFIDGDVWLAGTSIPFTTGL 448
Score = 24.9 bits (48), Expect(2) = 2e-030
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1 / +1
Query: 1 GAGPQGEAVGGRHRHPQL 54
GAGP G RH HP L
Sbjct: 52 GAGPGGPQPEHRHLHPPL 105
>gb|CW355046.1|CW355046 fsbb001f019i07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f019i07, DNA
sequence
Length = 732
Score = 133 bits (284), Expect = 3e-030
Identities = 49/100 (49%), Positives = 65/100 (65%)
Frame = +2 / -3
Query: 104 TFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERVK 283
T+LGRPWK +SRT+ +QSE+ +DP GW+PW GD+ LST +YA+ N GPGA+ S RV
Sbjct: 688 TYLGRPWKLYSRTVIMQSEVDALVDPAGWMPWDGDYALSTLFYAEYNNSGPGADTSRRVA 509
Query: 284 WRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGLL 403
W G + +TV + + G WLPQ GVPF GL+
Sbjct: 508 WPGFHVLNGTADAANFTVGNMVLGDFWLPQTGVPFTSGLI 389
>gb|BE361683.1|BE361683 DG1_81_F09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 592
Score = 133 bits (284), Expect = 3e-030
Identities = 49/100 (49%), Positives = 65/100 (65%)
Frame = +2 / +3
Query: 104 TFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERVK 283
T+LGRPWK +SRT+ +QSE+ +DP GW+PW GD+ LST +YA+ N GPGA+ S RV
Sbjct: 57 TYLGRPWKLYSRTVIMQSEVDALVDPAGWMPWDGDYALSTLFYAEYNNSGPGADTSRRVA 236
Query: 284 WRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGLL 403
W G + +TV + + G WLPQ GVPF GL+
Sbjct: 237 WPGFHVLNGTADAANFTVGNMVLGDFWLPQTGVPFTSGLI 356
>gb|CN138851.1|CN138851 OX1_14_H09.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_14_H09_A002 3', mRNA sequence
Length = 491
Score = 100 bits (214), Expect(3) = 7e-030
Identities = 35/63 (55%), Positives = 45/63 (71%)
Frame = +2 / +1
Query: 104 TFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERVK 283
++LGRPWK SRT+ ++S +GG +DP GW+PW GDF L T YA+ N GPGA+ S RV
Sbjct: 142 SYLGRPWKNFSRTVVMESYVGGLVDPSGWMPWSGDFALDTL*YAEYNNSGPGADTSRRVA 321
Query: 284 WRG 292
W G
Sbjct: 322 WPG 330
Score = 41.4 bits (84), Expect(3) = 7e-030
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2 / +1
Query: 329 YTVESFIQGQHWLPQLGVPFIPGLL 403
+TV S + G++WLPQ GVPF GL+
Sbjct: 367 FTVTSMVLGENWLPQTGVPFTSGLI 441
Score = 27.2 bits (53), Expect(3) = 7e-030
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1 / +3
Query: 1 GAGPQGEAVGGRHRHPQLHRRAAPGVREERR 93
GAGP+ H HP L R G R + R
Sbjct: 36 GAGPERPQPEHGHLHPGLLPRGGAGARRQHR 128
>gb|CD432457.1|CD432457 ETH1_30_A08.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_30_A08_A002 3', mRNA sequence
Length = 567
Score = 131 bits (280), Expect = 1e-029
Identities = 53/114 (46%), Positives = 69/114 (60%)
Frame = +2 / +3
Query: 59 VAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAK 238
VA + +S +T+LGRPWK++SRT+++QSE+ I P GWL W G+F L T YY +
Sbjct: 6 VAAAADLLQSSSSTKTYLGRPWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGE 185
Query: 239 VENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGL 400
N GPGA S RVKW+G + IT +TV SFI G WL +PF GL
Sbjct: 186 YMNTGPGAGTSGRVKWKGYRVITSAAEASAFTVGSFIDGDVWLAGTSIPFTTGL 347
>gb|CW401835.1|CW401835 fsbb001f092n11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f092n11, DNA
sequence
Length = 257
Score = 104 bits (222), Expect(3) = 5e-029
Identities = 37/40 (92%), Positives = 37/40 (92%)
Frame = -1 / -3
Query: 432 QCILPDCCCGSSPGMNGTPSCGSQCWPWMKLSTVYFCIAC 313
QCILPD CGSSPGMNGTPSCGSQCWPWMKLSTVYFC AC
Sbjct: 120 QCILPDWFCGSSPGMNGTPSCGSQCWPWMKLSTVYFCSAC 1
Score = 97.7 bits (207), Expect(4) = 4e-027
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +2 / +2
Query: 314 HAMQKYTVESFIQGQHWLPQLGVPFIPGLLPQQQSGRIH* 433
HA+QKYTVESFIQGQHWLPQLGVPFIPGLLPQ QSGRIH*
Sbjct: 2 HALQKYTVESFIQGQHWLPQLGVPFIPGLLPQNQSGRIH* 121
Score = 91.8 bits (194), Expect(3) = 1e-021
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = -3 / -2
Query: 433 SVYPARLLLRQQPRDEWHAELWEPVLALDEALDGVLLHRV 314
SVYPARL+LRQQPRDEWHAELWEPVLALDEAL GVLL RV
Sbjct: 121 SVYPARLVLRQQPRDEWHAELWEPVLALDEALHGVLLQRV 2
Score = 32.2 bits (64), Expect(3) = 5e-029
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = -1 / -2
Query: 606 PNSVHIS*FCTAFFYRI 556
P ++HIS*FCTAF ++I
Sbjct: 253 PGNMHIS*FCTAFLFQI 203
Score = 29.9 bits (59), Expect(4) = 4e-027
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +3 / +1
Query: 552 FIFDKKMQYKIN*CEHCL 605
+IF+K+M +IN*C +CL
Sbjct: 199 YIFEKEMPCRIN*CAYCL 252
Score = 27.6 bits (54), Expect(3) = 5e-029
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / -2
Query: 508 PWYVHVSAT 482
PWYVHVSAT
Sbjct: 157 PWYVHVSAT 131
Score = 26.7 bits (52), Expect(4) = 4e-027
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / +3
Query: 483 VALTCTYHG 509
VALTCTYHG
Sbjct: 132 VALTCTYHG 158
Score = 25.4 bits (49), Expect(3) = 1e-021
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2 / -3
Query: 605 QTVFTLVNFVLHFFIEY 555
Q + TLVN HFF +Y
Sbjct: 252 QAICTLVNSARHFFFKY 202
Score = 22.1 bits (42), Expect(3) = 1e-021
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / -1
Query: 506 MVRTC*CHV 480
MVRTC CH+
Sbjct: 155 MVRTCQCHM 129
Score = 18.9 bits (35), Expect(4) = 4e-027
Identities = 5/6 (83%), Positives = 6/6 (100%)
Frame = +3 / +1
Query: 507 GLVCWL 524
GLVCW+
Sbjct: 157 GLVCWV 174
>gb|CW349542.1|CW349542 fsbb001f010h01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f010h01, DNA
sequence
Length = 640
Score = 128 bits (275), Expect = 6e-029
Identities = 48/100 (48%), Positives = 64/100 (64%)
Frame = +2 / +1
Query: 101 RTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERV 280
+T+LGRPWK++SR +++QS IG + P+GWL W GDF L T YY + N GPGA ++ RV
Sbjct: 40 QTYLGRPWKQYSRVVFMQSYIGDLVRPEGWLAWDGDFALDTLYYGEYSNTGPGAGVAARV 219
Query: 281 KWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGL 400
KW G +T +TV FI+G WLP GV + GL
Sbjct: 220 KWPGFHVMTSAAEAGNFTVAQFIEGNMWLPPTGVKYTAGL 339
>gb|CX606104.1|CX606104 ANR1_1_D12.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_D12_A002 3', mRNA sequence
Length = 615
Score = 105 bits (225), Expect(2) = 1e-028
Identities = 36/63 (57%), Positives = 46/63 (73%)
Frame = +2 / +1
Query: 104 TFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERVK 283
++LGRPWK SRT+ ++S +GG +DP GW+PW GDF L T YYA+ N GPGA+ S RV
Sbjct: 40 SYLGRPWKNFSRTVVMESYVGGLVDPSGWMPWSGDFALDTLYYAEYNNSGPGADTSRRVA 219
Query: 284 WRG 292
W G
Sbjct: 220 WPG 228
Score = 41.4 bits (84), Expect(2) = 1e-028
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2 / +1
Query: 329 YTVESFIQGQHWLPQLGVPFIPGLL 403
+TV S + G++WLPQ GVPF GL+
Sbjct: 265 FTVTSMVLGENWLPQTGVPFTSGLI 339
>gb|CW172299.1|CW172299 104_583_11156215_148_36534_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156215, DNA
sequence
Length = 531
Score = 105 bits (225), Expect(2) = 1e-028
Identities = 36/63 (57%), Positives = 46/63 (73%)
Frame = +2 / -2
Query: 104 TFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERVK 283
++LGRPWK SRT+ ++S +GG +DP GW+PW GDF L T YYA+ N GPGA+ S RV
Sbjct: 455 SYLGRPWKNFSRTVVMESYVGGLVDPSGWMPWSGDFALDTLYYAEYNNSGPGADTSRRVA 276
Query: 284 WRG 292
W G
Sbjct: 275 WPG 267
Score = 41.4 bits (84), Expect(2) = 1e-028
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2 / -2
Query: 329 YTVESFIQGQHWLPQLGVPFIPGLL 403
+TV S + G++WLPQ GVPF GL+
Sbjct: 230 FTVTSMVLGENWLPQTGVPFTSGLI 156
>gb|CW266135.1|CW266135 104_735_11232263_148_35265_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232263, DNA
sequence
Length = 623
Score = 126 bits (270), Expect = 3e-028
Identities = 52/132 (39%), Positives = 73/132 (55%)
Frame = +2 / -3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR++ G V+ VA + +G ++LGRPWK +SRT+++Q+++ + P
Sbjct: 480 AQGREDPNQNTGIVVQGGKVAAAADLVPVLGNVSSYLGRPWKLYSRTVFVQTKMEALVHP 301
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W G F L T YYA+ N GPGA+ S RV W G +T +TV FIQG
Sbjct: 300 RGWLEWNGTFALDTLYYAEYMNRGPGADTSARVAWSGYHVLTNATDAANFTVLDFIQGDL 121
Query: 362 WLPQLGVPFIPG 397
WL P+ G
Sbjct: 120 WLNSTSFPYTLG 85
>gb|CD203831.1|CD203831 HS1_2_G09.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_2_G09_A012 3', mRNA sequence
Length = 565
Score = 99.6 bits (211), Expect(2) = 1e-026
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = +2 / +3
Query: 116 RPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRG 292
RPWK SRT+ ++S +GG +DP GW+PW GDF L T YYA+ N GPGA+ S RV W G
Sbjct: 3 RPWKNFSRTVVMESYVGGLVDPSGWMPWSGDFALDTLYYAEYNNSGPGADTSRRVAWPG 179
Score = 41.4 bits (84), Expect(2) = 1e-026
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2 / +3
Query: 329 YTVESFIQGQHWLPQLGVPFIPGLL 403
+TV S + G++WLPQ GVPF GL+
Sbjct: 216 FTVTSMVLGENWLPQTGVPFTSGLI 290
>gb|CW261863.1|CW261863 104_729_11229744_116_35210_094 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229744, DNA
sequence
Length = 587
Score = 111 bits (237), Expect(2) = 4e-026
Identities = 45/99 (45%), Positives = 57/99 (57%)
Frame = +2 / -2
Query: 104 TFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERVK 283
T+LGRPWK +SR ++++S I +GWLPW T YYA+ +N GPGA + RVK
Sbjct: 469 TYLGRPWKAYSRVIFMKSTISNVRHAKGWLPWEHAAPPDTIYYAEYDNDGPGAAVGGRVK 290
Query: 284 WRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGL 400
W G I +TVE FI G WLP GV + PGL
Sbjct: 289 WSGFHTIQDAAEAINFTVEKFINGNDWLPGTGVDYKPGL 173
Score = 27.6 bits (54), Expect(2) = 4e-026
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2 / -2
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVG 94
A+GR + S GG +CTVA + K+ G
Sbjct: 568 AEGRDKPDSNGGFCFQSCTVAADDDLAKASG 476
>gb|CD231524.1|CD231524 SS1_22_A05.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_22_A05_A012 3', mRNA sequence
Length = 520
Score = 117 bits (251), Expect = 1e-025
Identities = 46/96 (47%), Positives = 60/96 (62%)
Frame = +2 / +3
Query: 101 RTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERV 280
+T+LGRPWK++SRT+++Q E+ I P GWL W G+F L T Y + N GPGA S RV
Sbjct: 21 KTYLGRPWKQYSRTVFMQ*ELDSLIAPAGWLEWDGNFALDTLYSGEYMNTGPGAGTSGRV 200
Query: 281 KWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPF 388
KW+G + IT +TV SFI G WL +PF
Sbjct: 201 KWKGYRVITSAPEASAFTVGSFIDGDVWLAGTSIPF 308
>gb|CW112880.1|CW112880 104_486_11105136_116_34548_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11105136, DNA
sequence
Length = 396
Score = 112 bits (239), Expect = 5e-024
Identities = 43/97 (44%), Positives = 58/97 (59%)
Frame = +2 / +1
Query: 107 FLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKW 286
+LGRPWK +SRT+++Q+++ + P+GWL W G F L T YYA+ N GPGA+ S RV W
Sbjct: 1 YLGRPWKLYSRTVFVQTKMEALVHPRGWLEWNGTFALDTLYYAEYMNRGPGADTSARVAW 180
Query: 287 RGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPG 397
G +T +TV FIQG WL P+ G
Sbjct: 181 SGYHVLTNATDAANFTVLDFIQGDLWLNSTSFPYTLG 291
>gb|CW432733.1|CW432733 fsbb001f147j17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f147j17, DNA
sequence
Length = 201
Score = 75.8 bits (159), Expect(2) = 2e-023
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = +1 / -3
Query: 1 GAGPQGEAVGGRHRHPQLHRRAAPGVREERR 93
GAGPQGE VGGRHRHPQLH RAAPGVREERR
Sbjct: 169 GAGPQGEEVGGRHRHPQLHHRAAPGVREERR 77
Score = 69.8 bits (146), Expect(2) = 5e-023
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = -1 / +2
Query: 102 LNRPTLFSNSGCGATVQLWMTVPPTDRLSLRPCA 1
L P LFSNSGCG+ VQLWMTVPP D LSLRPCA
Sbjct: 68 LPSPALFSNSGCGSMVQLWMTVPPADLLSLRPCA 169
Score = 57.4 bits (119), Expect(2) = 5e-023
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = -1 / +2
Query: 162 ISDWM*SVRECSFHGRPRKVLNRPT 88
ISDWM*SVRECSFHGRPRKVL+ P+
Sbjct: 2 ISDWM*SVRECSFHGRPRKVLSLPS 76
Score = 52.8 bits (109), Expect(2) = 2e-023
Identities = 21/25 (84%), Positives = 21/25 (84%)
Frame = +1 / -3
Query: 88 RRPVQDLPGPPVEGALAHALHPVGD 162
RR QDLPG VEGALAHALHPVGD
Sbjct: 76 RRQAQDLPGAAVEGALAHALHPVGD 2
>gb|CW405176.1|CW405176 fsbb001f097k01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f097k01, DNA
sequence
Length = 492
Score = 70.3 bits (147), Expect(3) = 5e-023
Identities = 27/60 (45%), Positives = 36/60 (60%)
Frame = +2 / -3
Query: 221 TCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGL 400
T YY + +N+GPGA + RV W G + IT ++TV FI G WLP G+PF+ GL
Sbjct: 217 TVYYGEYQNYGPGAALEGRVAWPGHRVITMAEEAMEFTVRWFIAGYSWLPATGLPFVGGL 38
Score = 50.6 bits (104), Expect(3) = 5e-023
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2 / -3
Query: 104 TFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPW 199
T++GRPWK ++R +Y S +G +D GWL W
Sbjct: 340 TYIGRPWKPYARVVYTMSYVGEHVDAAGWLAW 245
Score = 25.4 bits (49), Expect(3) = 5e-023
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2 / -3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKS 88
AQ R + G +H C + P PE+ S
Sbjct: 430 AQWRADPNQSTGFSVHACRLVPAPEYPAS 344
>gb|CW155885.1|CW155885 104_558_11146378_148_36365_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146378, DNA
sequence
Length = 728
Score = 100 bits (214), Expect(2) = 3e-022
Identities = 36/67 (53%), Positives = 48/67 (71%)
Frame = +2 / -1
Query: 104 TFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERVK 283
++LGRPWKE++RT+ ++S IG I P+GW W+GD GL T YYA+ N GPGA S+RV
Sbjct: 416 SYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVN 237
Query: 284 WRGIKNI 304
W G + I
Sbjct: 236 WPGYRVI 216
Score = 24.9 bits (48), Expect(2) = 3e-022
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2 / -1
Query: 329 YTVESFIQGQHWLPQLGVPFIPG 397
+T FI G WL G P + G
Sbjct: 194 FTAGVFIDGMTWLQSTGTPNVMG 126
>gb|CF486010.1|CF486010 POL1_35_D06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_D06_A002 3', mRNA sequence
Length = 713
Score = 100 bits (214), Expect(2) = 3e-022
Identities = 36/67 (53%), Positives = 48/67 (71%)
Frame = +2 / +2
Query: 104 TFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERVK 283
++LGRPWKE++RT+ ++S IG I P+GW W+GD GL T YYA+ N GPGA S+RV
Sbjct: 152 SYLGRPWKEYARTVVMESTIGDLIRPEGWAEWMGDLGLKTLYYAEYANTGPGAGTSKRVN 331
Query: 284 WRGIKNI 304
W G + I
Sbjct: 332 WPGYRVI 352
Score = 24.9 bits (48), Expect(2) = 3e-022
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2 / +2
Query: 329 YTVESFIQGQHWLPQLGVPFIPG 397
+T FI G WL G P + G
Sbjct: 374 FTAGVFIDGMTWLQSTGTPNVMG 442
>gb|CW419545.1|CW419545 fsbb001f124h07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f124h07, DNA
sequence
Length = 454
Score = 96.8 bits (205), Expect(3) = 1e-021
Identities = 32/58 (55%), Positives = 43/58 (74%)
Frame = +2 / -2
Query: 113 GRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKW 286
GRPWKE++RTLY+ +G + P+GWLPW GDF L T YY + ++ GPGAN + RV+W
Sbjct: 450 GRPWKEYARTLYVSCYLGTVVRPEGWLPWRGDFALRTLYYGEFDSRGPGANNTARVEW 277
Score = 23.5 bits (45), Expect(3) = 1e-021
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2 / -2
Query: 305 TYQHAMQKYTVESFIQGQHWL 367
T + ++ ++ E+FIQG W+
Sbjct: 267 TPEQHVKHFSKENFIQGHQWI 205
Score = 22.1 bits (42), Expect(3) = 1e-021
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +2 / -1
Query: 524 GLCYFDYY 547
GLC+F YY
Sbjct: 46 GLCFFSYY 23
>gb|CW350958.1|CW350958 fsbb001f012i07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f012i07, DNA
sequence
Length = 555
Score = 90.4 bits (191), Expect(3) = 2e-021
Identities = 30/67 (44%), Positives = 44/67 (65%)
Frame = +2 / -3
Query: 77 FEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGP 256
+ ++ G +LGRPWKE+SRT+Y+ + + PQGW+PW GDF L T YY + ++ GP
Sbjct: 337 YRENPGVHHVYLGRPWKEYSRTVYLGCTLAEIVQPQGWMPWNGDFALKTLYYGEYDSAGP 158
Query: 257 GANMSER 277
GA + R
Sbjct: 157 GAGAASR 137
Score = 28.1 bits (55), Expect(3) = 2e-021
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 329 YTVESFIQGQHWLPQL 376
Y+V +FIQG W+P++
Sbjct: 91 YSVANFIQGHEWIPKV 44
Score = 22.1 bits (42), Expect(3) = 2e-021
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2 / -3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEF 79
AQGR + G V+ C V EF
Sbjct: 424 AQGRTDPAQPTGIVLSRCAVNGSDEF 347
>gb|CW413647.1|CW413647 fsbb001f112o08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f112o08, DNA
sequence
Length = 593
Score = 103 bits (219), Expect = 3e-021
Identities = 34/63 (53%), Positives = 47/63 (74%)
Frame = +2 / -2
Query: 98 FRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSER 277
+R +LGRPWKE++RTLY+ +G + P+GWLPW GDF L T YY + ++ GPGAN + R
Sbjct: 256 YRLYLGRPWKEYARTLYVSCYLGTVVRPEGWLPWRGDFALRTLYYGEFDSRGPGANNTAR 77
Query: 278 VKW 286
V+W
Sbjct: 76 VEW 68
>gb|CW450958.1|CW450958 fsbb001f189n08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f189n08, DNA
sequence
Length = 689
Score = 65.2 bits (136), Expect(3) = 7e-021
Identities = 26/63 (41%), Positives = 36/63 (57%)
Frame = +2 / -3
Query: 212 GLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFI 391
GL+T +Y + +N+GPGA ++ RVKW G I ++TV FI G WLP G+ F
Sbjct: 429 GLATLFYGEYKNYGPGAGVAGRVKWPGYHVIMDAAVASRFTVRRFIDGLAWLPGTGITFT 250
Query: 392 PGL 400
L
Sbjct: 249 ADL 241
Score = 51.0 bits (105), Expect(3) = 7e-021
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +2 / -3
Query: 92 GRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPW 199
G++ T+LGRPWK SR + ++S +G I +GWL W
Sbjct: 567 GKYPTYLGRPWKPFSRVVVMESYLGPGIQARGWLEW 460
Score = 22.6 bits (43), Expect(3) = 7e-021
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2 / -3
Query: 2 AQGRKERRSVGGTVIHNCTV 61
AQGRK+ G H C V
Sbjct: 630 AQGRKDPNQNTGFSFHGCVV 571
>gb|CW241950.1|CW241950 104_701_11219058_116_37554_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11219058, DNA
sequence
Length = 636
Score = 65.2 bits (136), Expect(3) = 7e-021
Identities = 26/63 (41%), Positives = 36/63 (57%)
Frame = +2 / -3
Query: 212 GLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFI 391
GL+T +Y + +N+GPGA ++ RVKW G I ++TV FI G WLP G+ F
Sbjct: 271 GLATLFYGEYKNYGPGAGVAGRVKWPGYHVIMDAAVASRFTVRRFIDGLAWLPGTGITFT 92
Query: 392 PGL 400
L
Sbjct: 91 ADL 83
Score = 51.0 bits (105), Expect(3) = 7e-021
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +2 / -3
Query: 92 GRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPW 199
G++ T+LGRPWK SR + ++S +G I +GWL W
Sbjct: 409 GKYPTYLGRPWKPFSRVVVMESYLGPGIQARGWLEW 302
Score = 22.6 bits (43), Expect(3) = 7e-021
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2 / -3
Query: 2 AQGRKERRSVGGTVIHNCTV 61
AQGRK+ G H C V
Sbjct: 472 AQGRKDPNQNTGFSFHGCVV 413
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 697,027,914
Number of Sequences: 832831
Number of extensions: 10985318
Number of successful extensions: 142093
Number of sequences better than 1.0e-020: 49
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 17707683924
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)