TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3748394.2.2
(3527 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW026127.1|CW026127 104_252_10497773_114_30510 Sorghum m... 417 e-140
gb|CW111187.1|CW111187 104_484_11104164_148_34528_042 Sorgh... 485 e-135
gb|CW111186.1|CW111186 104_484_11104164_116_34532_042 Sorgh... 472 e-131
gb|CL704230.2|CL704230 SP__Bb0012G11.f SP__Bb Sorghum propi... 333 e-125
gb|CW274351.1|CW274351 104_747_11404381_148_35370_059 Sorgh... 434 e-120
gb|CN131044.1|CN131044 RHOH1_45_B03.g1_A002 Acid- and alkal... 315 e-120
gb|CL174512.1|CL174512 104_379_10891685_116_31769_053 Sorgh... 387 e-116
gb|CW274350.1|CW274350 104_747_11404381_116_35374_059 Sorgh... 376 e-113
gb|CX615040.1|CX615040 GABR1_17_F12.g1_A002 GA- or brassino... 310 e-111
gb|AW671713.1|AW671713 LG1_351_F01.b1_A002 Light Grown 1 (L... 386 e-106
gb|CL704815.2|CL704815 SP__Bb0029E23.r SP__Bb Sorghum propi... 385 e-105
gb|CW202854.1|CW202854 104_629_11185318_116_36915_091 Sorgh... 235 e-104
gb|CW349038.1|CW349038 fsbb001f009l06f0 Sorghum methylation... 222 e-101
gb|CD212848.1|CD212848 HS1_16_B05.g1_A012 Heat-shocked seed... 360 6e-098
gb|BZ366846.1|BZ366846 ic99f12.g1 WGS-SbicolorF (JM107 adap... 302 4e-097
gb|BG054150.1|BG054150 OV2_1_H05.b1_A002 Ovary 2 (OV2) Sorg... 352 2e-095
gb|BE596045.1|BE596045 PI1_51_F11.g1_A002 Pathogen induced ... 341 2e-095
gb|BE596273.1|BE596273 PI1_51_F11.b1_A002 Pathogen induced ... 250 4e-085
gb|BZ412900.1|BZ412900 181g10_ctg5 Subclones from BAC clone... 221 2e-081
gb|CW213623.1|CW213623 104_645_11191655_116_37034_092 Sorgh... 221 3e-078
gb|BG054057.1|BG054057 OV2_1_H05.g1_A002 Ovary 2 (OV2) Sorg... 279 5e-077
gb|BG462954.1|BG462954 EM1_46_F12.b1_A002 Embryo 1 (EM1) So... 275 7e-075
gb|BG411201.1|BG411201 EM1_26_H05.b1_A002 Embryo 1 (EM1) So... 204 1e-070
gb|BG488317.1|BG488317 RHIZ2_62_B04.b1_A003 Rhizome2 (RHIZ2... 233 2e-069
gb|BE365858.1|BE365858 PI1_2_D09.b1_A002 Pathogen induced 1... 234 5e-067
gb|BG462896.1|BG462896 EM1_46_A04.b1_A002 Embryo 1 (EM1) So... 253 1e-065
gb|CF070625.1|CF070625 FE1_1_C02.g1_A002 Iron-deficient see... 252 3e-065
gb|CW190601.1|CW190601 104_612_11174591_148_36758_092 Sorgh... 221 2e-064
gb|CW057648.1|CW057648 104_299_10518335_115_30171 Sorghum m... 172 3e-064
gb|CW057647.1|CW057647 104_299_10518335_114_30169 Sorghum m... 154 3e-063
gb|BF655583.1|BF655583 FM1_45_G09.b1_A003 Floral-Induced Me... 167 3e-060
gb|CL167258.1|CL167258 104_364_10809943_114_31802_007 Sorgh... 221 7e-060
gb|CW213624.1|CW213624 104_645_11191655_148_37035_092 Sorgh... 221 7e-060
gb|CW191376.1|CW191376 104_613_11178463_116_36939_026 Sorgh... 221 7e-060
gb|CL167259.1|CL167259 104_364_10809943_116_31803_007 Sorgh... 221 7e-060
gb|BI140866.1|BI140866 IP1_40_A12.b1_A002 Immature pannicle... 178 1e-056
gb|BI140744.1|BI140744 IP1_38_B12.b1_A002 Immature pannicle... 177 2e-056
gb|CW227901.1|CW227901 104_667_11206064_148_37245_024 Sorgh... 119 3e-055
gb|CW388976.1|CW388976 fsbb001f073p13f0 Sorghum methylation... 126 5e-052
gb|CW367400.1|CW367400 fsbb001f040o01f0 Sorghum methylation... 172 9e-052
gb|CL701718.2|CL701718 SP__Ba0076G02.r SP__Ba Sorghum propi... 122 1e-051
gb|BG053850.1|BG053850 RHIZ2_10_E12.b1_A003 Rhizome2 (RHIZ2... 148 4e-050
gb|CW394820.1|CW394820 fsbb001f082j14f0 Sorghum methylation... 149 1e-047
gb|BG465156.1|BG465156 EM1_34_B02.b1_A002 Embryo 1 (EM1) So... 98 4e-047
gb|BG464782.1|BG464782 EM1_34_B02.g1_A002 Embryo 1 (EM1) So... 144 2e-046
gb|CW434864.1|CW434864 fsbb001f150m06f0 Sorghum methylation... 172 1e-043
gb|CW227900.1|CW227900 104_667_11206064_116_37246_024 Sorgh... 127 5e-043
gb|CW065564.1|CW065564 104_312_10523221_114_30128 Sorghum m... 169 2e-042
gb|CW026128.1|CW026128 104_252_10497773_116_30518 Sorghum m... 172 8e-042
gb|CL155022.1|CL155022 104_340_10781811_114_31469_291 Sorgh... 172 3e-041
gb|CW388977.1|CW388977 fsbb001f073p13k0 Sorghum methylation... 172 3e-041
gb|CW400873.1|CW400873 fsbb001f091g12f0 Sorghum methylation... 167 8e-040
gb|BG488166.1|BG488166 RHIZ2_60_D03.b1_A003 Rhizome2 (RHIZ2... 148 9e-040
gb|BG104052.1|BG104052 RHIZ2_39_H10.b1_A003 Rhizome2 (RHIZ2... 148 9e-040
gb|BG465566.1|BG465566 RHIZ2_46_B03.b1_A003 Rhizome2 (RHIZ2... 148 9e-040
gb|CL167624.1|CL167624 104_364_10810209_116_31803_273 Sorgh... 154 1e-038
gb|BM322414.1|BM322414 PIC1_4_E07.b1_A002 Pathogen-infected... 143 1e-037
gb|BZ412896.1|BZ412896 181g10_07 Subclones from BAC clones ... 155 4e-036
gb|CW422317.1|CW422317 fsbb001f131i21k0 Sorghum methylation... 155 4e-036
gb|CW029182.1|CW029182 104_256_10499530_114_30399 Sorghum m... 153 2e-035
gb|CW237473.1|CW237473 104_693_11216188_148_37516_002 Sorgh... 152 4e-035
gb|BE598152.1|BE598152 PI1_66_C12.b1_A002 Pathogen induced ... 140 2e-034
gb|BG241645.1|BG241645 RHIZ2_49_B06.b1_A003 Rhizome2 (RHIZ2... 130 3e-034
gb|BF176873.1|BF176873 EM1_3_F09.b1_A002 Embryo 1 (EM1) Sor... 128 7e-034
gb|BM322381.1|BM322381 PIC1_4_B01.b1_A002 Pathogen-infected... 139 2e-033
gb|CW436823.1|CW436823 fsbb001f153j23k0 Sorghum methylation... 145 4e-033
gb|CW202855.1|CW202855 104_629_11185318_148_37061_091 Sorgh... 142 3e-032
gb|BG465471.1|BG465471 RHIZ2_45_A04.b1_A003 Rhizome2 (RHIZ2... 121 1e-031
gb|CW078961.1|CW078961 104_397_10898775_114_32380_056 Sorgh... 119 3e-031
gb|CL184321.1|CL184321 104_397_10898775_114_32360_056 Sorgh... 119 3e-031
gb|BF176872.1|BF176872 EM1_3_F08.b1_A002 Embryo 1 (EM1) Sor... 117 2e-030
gb|BF422126.1|BF422126 FM1_12_B10.b1_A003 Floral-Induced Me... 127 3e-029
gb|BI351258.1|BI351258 IP1_69_B01.b1_A002 Immature pannicle... 125 5e-027
gb|BG241637.1|BG241637 RHIZ2_49_A07.b1_A003 Rhizome2 (RHIZ2... 104 2e-026
gb|AW672444.1|AW672444 LG1_359_C11.g1_A002 Light Grown 1 (L... 122 5e-026
gb|CN130960.1|CN130960 RHOH1_45_B03.b1_A002 Acid- and alkal... 105 9e-026
gb|AW672411.1|AW672411 LG1_359_C11.b1_A002 Light Grown 1 (L... 96 1e-024
gb|CW103456.1|CW103456 104_472_11011898_116_34433_013 Sorgh... 60 2e-023
gb|BF177224.1|BF177224 EM1_1_E07.b1_A002 Embryo 1 (EM1) Sor... 94 2e-023
gb|BE364125.1|BE364125 PI1_11_D07.g1_A002 Pathogen induced ... 112 3e-023
gb|CL174513.1|CL174513 104_379_10891685_148_31768_053 Sorgh... 110 1e-022
gb|BG050643.1|BG050643 FM1_70_H01.g1_A003 Floral-Induced Me... 109 3e-022
>gb|CW026127.1|CW026127 104_252_10497773_114_30510 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10497773, DNA
sequence
Length = 706
Score = 417 bits (905), Expect(2) = e-140
Identities = 174/179 (97%), Positives = 177/179 (98%)
Frame = +1 / -3
Query: 880 GESGGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNGRPVLPY 1059
GES GAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNG+PVLPY
Sbjct: 578 GESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNGKPVLPY 399
Query: 1060 VIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSKEEIDSTYKIMRRI 1239
VIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSK EIDSTYKIMRRI
Sbjct: 398 VIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSKAEIDSTYKIMRRI 219
Query: 1240 EGEELALDASELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVSCHGRYMPRMVV 1416
EGEEL+LDASELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVSCHGR+MPRMVV
Sbjct: 218 EGEELSLDASELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVSCHGRFMPRMVV 42
Score = 390 bits (845), Expect(2) = e-131
Identities = 153/182 (84%), Positives = 159/182 (87%)
Frame = +3 / -2
Query: 879 G*EWRSLHCAHTVWAAG*IPQEGSVVALPPRVCRWSPCAYPEHVQGSGRAGWKWEASTAL 1058
G E RSLHCAHTVWA *IPQEGS VALPPR+CRWS CAYPEHVQGSGRAGWKWEASTAL
Sbjct: 579 GRECRSLHCAHTVWATR*IPQEGSAVALPPRICRWSSCAYPEHVQGSGRAGWKWEASTAL 400
Query: 1059 RDTWALCRCWRCCCSPFWCAECANGAHWPLTWEEQAGTTAEARAHVQGGDRFDIQDHEAY 1238
RDTW LCRCWRCCCSP CAECA+GAHW LTWEEQAG TAEARAHV GDRF++QDHEAY
Sbjct: 399 RDTWTLCRCWRCCCSPLRCAECAHGAHWSLTWEEQAGATAEARAHV*SGDRFNLQDHEAY 220
Query: 1239 RG*GAGPGCVRACNHEHKAGD**AVGIVRWI*CQA*ESAEGTGEARG*LPWSLHA*DGGD 1418
RG*GA PGCVRAC+HEHKAGD** VGI+RWI* QA*ES E GEA G*LPWS HA*DGG
Sbjct: 219 RG*GAVPGCVRACHHEHKAGD**TVGIIRWI*RQA*ESVESPGEAWG*LPWSFHA*DGGK 40
Query: 1419 SS 1424
S
Sbjct: 39 YS 34
Score = 355 bits (770), Expect(2) = e-116
Identities = 153/184 (83%), Positives = 160/184 (86%)
Frame = +2 / -1
Query: 884 RVAEPTLCAYRVGRGINTSRRKRCGLTSKSLSMEPLRIS*TCPRLWESRLEMGGQYCLT* 1063
RV EPTLCAYRVG INTSRRKRCGLTSK+LSME LRIS*TCPRLWESRLEMG QYCLT*
Sbjct: 574 RVPEPTLCAYRVGHAINTSRRKRCGLTSKNLSMELLRIS*TCPRLWESRLEMGSQYCLT* 395
Query: 1064 YMGTMPMLEMLLLSFLVR*MCQWCSLATHLGGTSWNNC*SKGACPRRRSIRHTRS*GVSR 1243
YM TMPMLEMLLLS VR*MC WCSL THLGGTSW+NC*SKGAC +RR I+ TRS*GVSR
Sbjct: 394 YMDTMPMLEMLLLSSPVR*MCPWCSLVTHLGGTSWSNC*SKGACLKRR*IQPTRS*GVSR 215
Query: 1244 VRSWPWMRQSL*SRAQGRRLMSSGDCTMDLMSSLRKC*GHGRGAGLAAMVVTCLGWW*FL 1423
VRS PWMRQSL SRAQGRRLM+SGD TMDL SSLRKC* GRG GLAAMVV+CLGWW*
Sbjct: 214 VRSCPWMRQSLSSRAQGRRLMNSGDYTMDLTSSLRKC*EPGRGVGLAAMVVSCLGWW*VF 35
Query: 1424 REWI 1435
R +
Sbjct: 34 RSLV 23
Score = 346 bits (750), Expect(2) = e-115
Identities = 148/177 (83%), Positives = 150/177 (84%)
Frame = -2 / +2
Query: 1396 NDHGS*PRASPVPSALSQA*HQIHRTIPTAHQSPALCS*LQALTHPGPAPHPRYAS*SCM 1217
NDHGS*P ASP S LSQA* QIHR IPT HQSPALCS* QALTHPG APHPRYAS*SC
Sbjct: 62 NDHGS*PHASPGLSTLSQA*RQIHRIIPTVHQSPALCS**QALTHPGTAPHPRYAS*SCR 241
Query: 1216 SNRSPPWTCALASAVVPACSSQVSGQ*APLAHSAHQKGEQQHLQHRHSAHVSRKAVLASH 1037
N SP TCALASAV PACSSQVS Q*AP AHSAH++GEQQHLQHRHS HVSRKAVLASH
Sbjct: 242 LNLSPL*TCALASAVAPACSSQVSDQ*APWAHSAHRRGEQQHLQHRHSVHVSRKAVLASH 421
Query: 1036 FQPALPEPWTCSGYAQGLHRQTLGGKATTLPS*GIYPAAHTVCAQCRLRHSHPSPLH 866
FQPALPEPWTCSGYAQ LHRQ LGGKAT LPS*GIY AHTVCAQCRLRHS P H
Sbjct: 422 FQPALPEPWTCSGYAQELHRQILGGKATALPS*GIYRVAHTVCAQCRLRHSRPPLHH 592
Score = 183 bits (394), Expect(3) = 7e-097
Identities = 79/90 (87%), Positives = 80/90 (88%)
Frame = -3 / +3
Query: 1152 K*VASEHHWHIQRTRKESSNISSIGIVPMYHVRQYWPPISNLLSQSLGHVQDMRKGSIDK 973
K*V SEHH HIQRT +ESSNISSIGIV MYHVRQYW PISNLLSQSLGHVQDMRK SIDK
Sbjct: 306 K*VTSEHHGHIQRTGEESSNISSIGIVSMYHVRQYWLPISNLLSQSLGHVQDMRKSSIDK 485
Query: 972 LLEVRPQRFLLEVFIPRPTRYAHNVGSATL 883
LEVRPQRFLLEVFI PTRYAHNVGS TL
Sbjct: 486 FLEVRPQRFLLEVFIAWPTRYAHNVGSGTL 575
Score = 148 bits (317), Expect(3) = 2e-081
Identities = 69/100 (69%), Positives = 74/100 (74%)
Frame = -1 / +1
Query: 1418 ITTILGM*RPWQLTPRLARALSTFSSLTSNPSYNPHCSSISCLVLVITXXXXXXXXXXXS 1239
+TTILGM RPWQLTPRLARAL+TFSSLTSNPSYNPHCSSISCLVLV+T S
Sbjct: 40 LTTILGMKRPWQLTPRLARALNTFSSLTSNPSYNPHCSSISCLVLVMTSSDASRDSSSPS 219
Query: 1238 IRLMILYVESISSLDMRXXXXXXXXXXXXSEWPVSTIGTF 1119
IRLMIL VESIS+LDMR SE PVST+GTF
Sbjct: 220 IRLMIL*VESISALDMRPCFSSCSSLFLPSE*PVSTMGTF 339
Score = 139 bits (298), Expect(3) = 7e-097
Identities = 58/77 (75%), Positives = 62/77 (80%)
Frame = -3 / +3
Query: 1449 YNIAEIHSRRNHHHPRHVTTMAANPAPRPCPQHFLKLDIKSIVQSPLLINLLPCARDYKL 1270
Y ++ +HHPRH TTMAANP PRP QHFLKLD+KSIV SPL INLLPCARD KL
Sbjct: 9 YLVSTTRDLNTYHHPRHETTMAANPTPRPGSQHFLKLDVKSIV*SPLFINLLPCARDDKL 188
Query: 1269 *RIQGQLLTLDTPHDLV 1219
*RIQGQLLTLDTPHDLV
Sbjct: 189 *RIQGQLLTLDTPHDLV 239
Score = 135 bits (290), Expect(3) = 2e-081
Identities = 55/57 (96%), Positives = 56/57 (98%)
Frame = -1 / +1
Query: 1064 IT*GSTGLPFPTCSPRALDMFRICARAPSTNSWR*GHNASFLRYLSRGPHGMRTM*A 894
IT*GSTG PFPTCSPRALDMFRICARAPSTNSWR*GH+ASFLRYLSRGPHGMRTM*A
Sbjct: 394 IT*GSTGFPFPTCSPRALDMFRICARAPSTNSWR*GHSASFLRYLSRGPHGMRTM*A 564
Score = 106 bits (226), Expect(2) = e-140
Identities = 40/43 (93%), Positives = 41/43 (95%)
Frame = +2 / -1
Query: 749 RCQ*CLECTGWTSSLVKCHLLTWTGATVSQPRCYAPVPMMERG 877
+CQ*CLECTGWTSSLVKCHLLTWTGA VSQ RCYAPVPMMERG
Sbjct: 706 QCQ*CLECTGWTSSLVKCHLLTWTGAMVSQRRCYAPVPMMERG 578
Score = 102 bits (218), Expect(2) = e-131
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +1 / -3
Query: 751 MSMMPGVYRVDLFTRQVSSLDVDWSYGEPTEMLCAGSNDGEGMGESG 891
MSMMPGVYRVDLFTRQVSS DVDWSYGEPTEMLC+GSNDGEG +G
Sbjct: 704 MSMMPGVYRVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGGESAG 564
Score = 94.5 bits (200), Expect(2) = e-115
Identities = 38/41 (92%), Positives = 38/41 (92%)
Frame = -2 / +2
Query: 874 PLHHWNRRITSRLAHRSSSPRQEMTLDE*RGPPCTLQASLT 752
PLHHWNR ITS LAH SSSPRQEMTLDE*RGPPCTLQASLT
Sbjct: 581 PLHHWNRSITSPLAHHSSSPRQEMTLDE*RGPPCTLQASLT 703
Score = 86.8 bits (183), Expect(2) = e-116
Identities = 38/42 (90%), Positives = 39/42 (92%)
Frame = +3 / -2
Query: 750 DVNDAWSVQGGPLHSSSVIS*RGLELR*ANRDVMRRFQ*WRG 875
+VNDAWSVQGGPLHSSSVIS*RGLEL *AN DVM RFQ*WRG
Sbjct: 705 NVNDAWSVQGGPLHSSSVIS*RGLELW*ANGDVMLRFQ*WRG 580
Score = 74.8 bits (157), Expect(3) = 7e-097
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -1 / +1
Query: 851 HNISVGSP*LQSTSRDDT*RVKRSTLYTPGIIDI 750
HNISVGSP*LQSTS DDT*RVKRSTLYTPGIIDI
Sbjct: 604 HNISVGSP*LQSTSGDDT*RVKRSTLYTPGIIDI 705
Score = 62.5 bits (130), Expect(3) = 2e-081
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -3 / +3
Query: 876 PLSIIGTGA*HLGWLTVAPVHVKR*HLT 793
PLSIIGTGA*HL WLT+APVHV+R*HLT
Sbjct: 579 PLSIIGTGA*HLRWLTIAPVHVRR*HLT 662
>gb|CW111187.1|CW111187 104_484_11104164_148_34528_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104164, DNA
sequence
Length = 646
Score = 485 bits (1054), Expect = e-135
Identities = 203/215 (94%), Positives = 207/215 (96%)
Frame = +1 / +1
Query: 2089 NIHLYSWPEHCRTYLTRVAGCRLRNPRWLKDTPADAGADEEEFLEDSMDAQDLSLRLSID 2268
NIHLYSWPEHCRTYLTRVAGCRLRNPRWLKDTPADAGAD+EEFLEDSMDAQDLSLRLSID
Sbjct: 1 NIHLYSWPEHCRTYLTRVAGCRLRNPRWLKDTPADAGADDEEFLEDSMDAQDLSLRLSID 180
Query: 2269 GEKSSLNTNDPLSSDPQDQVQKIMNNIKQSSALPPSMSSVADGAKNATEATGSTMNKYPL 2448
GEKSSLNTNDPLSSDPQDQVQKIMN IKQSSALPPSMSS DGAKNA EATG TMNKYPL
Sbjct: 181 GEKSSLNTNDPLSSDPQDQVQKIMNKIKQSSALPPSMSSGGDGAKNAAEATGGTMNKYPL 360
Query: 2449 LRRRRRLFVIAVDCYQDDGRASKKMLQVIQEVFRAVRSDSQMFKISGFTLSTAMPLSETL 2628
LRRRRRLFVIAVDCY+DDGRASKKMLQVIQEVFRAVRSDSQM KISGF LSTAMPLSETL
Sbjct: 361 LRRRRRLFVIAVDCYEDDGRASKKMLQVIQEVFRAVRSDSQMSKISGFALSTAMPLSETL 540
Query: 2629 QLLQLGKIPATDFDALICGSGSEVYYPGTANCMDA 2733
QLL+LGKIPATDFDALICGSGSEVYYPGT NC+DA
Sbjct: 541 QLLKLGKIPATDFDALICGSGSEVYYPGTVNCIDA 645
Score = 439 bits (953), Expect = e-121
Identities = 182/214 (85%), Positives = 188/214 (87%)
Frame = +3 / +3
Query: 2091 HPPLLMAGALPHLPHQGGRVPVKEPEVAEGHTSRCRSR*GGVPGGFHGRSGPVTPSVHRR 2270
HPPLLMAGALPHLPHQGG VPVKEPEVAEGHT RC S * GVPGGFHGRSGPVTPSVHR
Sbjct: 3 HPPLLMAGALPHLPHQGGWVPVKEPEVAEGHTGRCWS***GVPGGFHGRSGPVTPSVHRW 182
Query: 2271 *EELAEHQRPTVVRPPGSSAEDHEQHQAVVSTSAVHVLSRRRCQERNRGHRQHHEQIPTP 2450
*EEL EH RPTVV P GS AEDHEQ QAV+S SAV VL R RCQE +RGHR+HHEQ+PTP
Sbjct: 183 *EELPEH*RPTVVGPAGSGAEDHEQDQAVISASAVDVLGR*RCQECSRGHRRHHEQVPTP 362
Query: 2451 APAPALVRHSCGLLPGRWPC*QEDAAGDPGSFQSSPIGLPDVQDLRVHAVDCHAVVRDTP 2630
APAPA VRHSCGLL RWPC*QEDAAGDP SFQSSP+GLPDVQDLRV AV+C AVVRDTP
Sbjct: 363 APAPAPVRHSCGLLRRRWPC*QEDAAGDPRSFQSSPVGLPDVQDLRVRAVNCDAVVRDTP 542
Query: 2631 ASAARQDPSDRLRRPHLWQRQRGVLSWHGELHGR 2732
AS ARQDPSDRLRRPHLWQ QRGVLSWHGELH R
Sbjct: 543 ASEARQDPSDRLRRPHLWQWQRGVLSWHGELHRR 644
Score = 361 bits (782), Expect(2) = e-102
Identities = 154/184 (83%), Positives = 158/184 (85%)
Frame = -2 / -1
Query: 2641 AAEAGVSRTTAWQSTA*TLRS*TSGSPIGLL*KLPGSPAASSC*HGHRPGSSPQL*RTSA 2462
A+EAGVSRTTA Q TA TLRS TSGSP GLL*KL GSPAASSC*HGHR SSPQL*RT A
Sbjct: 553 ASEAGVSRTTASQLTARTLRSWTSGSPTGLL*KLLGSPAASSC*HGHRLRSSPQL*RTGA 374
Query: 2461 GAGAGVGICSWCCLWPRLRSWHRLRLRTWTAEVLTTA*CCS*SSALDPGGRTTVGRWCSA 2282
GAGAGVG CSWC LWPRL SWHR R RT TAE L TA* CS*SSA DP G TTVGR CS
Sbjct: 373 GAGAGVGTCSWCRLWPRLHSWHRHRPRTSTAEALMTA*SCS*SSAPDPAGPTTVGR*CSG 194
Query: 2281 SSSHRRWTDGVTGPERPWNPPGTPPHRLRHLLVCPSATSGSLTGTRPPW*GKCGSAPAMS 2102
SSSH RWTDGVTGPERPWNPPGTP H+L+HL VCPSATSGSLTGT+PPW*GKCGSAPAMS
Sbjct: 193 SSSHHRWTDGVTGPERPWNPPGTPHHQLQHLPVCPSATSGSLTGTQPPW*GKCGSAPAMS 14
Query: 2101 RGGC 2090
RGGC
Sbjct: 13 RGGC 2
Score = 298 bits (645), Expect(3) = e-109
Identities = 131/151 (86%), Positives = 136/151 (90%)
Frame = -1 / -3
Query: 2726 MQFAVPG*YTSLPLPQMRASKSVAGILPSCRSWSVSDNGMAVDSVNPEILNIWESDRTAL 2547
MQF VPG*YTSLPLPQMRASKSVAGILPS RSWSVSDNG+AVDS NPEIL+IWESDRTAL
Sbjct: 638 MQFTVPG*YTSLPLPQMRASKSVAGILPSFRSWSVSDNGIAVDSANPEILDIWESDRTAL 459
Query: 2546 KTSWITCSIFLLARPSSW*QSTAMTNKXXXXXRSGYLFMVLPVASVAFLAPSATEDMDGG 2367
KTSWITCSIFLLARPSS *QSTAMTN+ RSGYLFMV PVAS AFLAPS ED+DGG
Sbjct: 458 KTSWITCSIFLLARPSSS*QSTAMTNRRRRRRRSGYLFMVPPVASAAFLAPSPPEDIDGG 279
Query: 2366 SADDCLMLFMIFCT*SWGSDDSGSLVFSELF 2274
SADDCL+LFMIFCT*S GSDDSGSLVF ELF
Sbjct: 278 SADDCLILFMIFCT*SCGSDDSGSLVFRELF 186
Score = 257 bits (556), Expect(2) = 6e-070
Identities = 109/123 (88%), Positives = 110/123 (89%)
Frame = -3 / -2
Query: 2733 SVHAVRRARIVHLAAAATDEGVEVGRWDLAELQKLECLGQRHGSRQREP*DLEHLGVRSD 2554
SV AV RARIVHLAA ATDEGVEVGRWDLAELQKLECLGQRH S QREP*DL HLGVR D
Sbjct: 645 SVDAVHRARIVHLAATATDEGVEVGRWDLAELQKLECLGQRHRS*QREP*DLGHLGVRPD 466
Query: 2553 CSENFLDHLQHLLASTAIVLVAVHSYDEQAPAPAQEWVFVHGAACGLGCVLGTVCD*GHG 2374
CSENFLDHLQHLLASTAIV VAVHSYDEQAPAPAQEWV VHGAACGLGC+LGTV GH
Sbjct: 465 CSENFLDHLQHLLASTAIVFVAVHSYDEQAPAPAQEWVLVHGAACGLGCILGTVTARGHR 286
Query: 2373 RRK 2365
RRK
Sbjct: 285 RRK 277
Score = 202 bits (435), Expect(3) = 2e-078
Identities = 85/99 (85%), Positives = 89/99 (89%)
Frame = +2 / +2
Query: 2438 NTHSCAGAGACSS*LWTATRTMAVLARRCCR*SRKFSEQSDRTPRCSRSQGSRCRLPCRC 2617
+THSCAGAGACSS*LWTAT+TMAVLARRCCR*S+KFSEQS RTPRC RSQGSRC+L CRC
Sbjct: 350 STHSCAGAGACSS*LWTATKTMAVLARRCCR*SKKFSEQSGRTPRCPRSQGSRCQLRCRC 529
Query: 2618 PRHSSFCSSARSQRPTSTPSSVXXXXRCTILARRTAWTL 2734
PRHSSF SSARSQRPTSTPSSV RCTILAR TA TL
Sbjct: 530 PRHSSF*SSARSQRPTSTPSSVAVAARCTILAR*TASTL 646
Score = 107 bits (229), Expect(3) = 2e-078
Identities = 45/61 (73%), Positives = 46/61 (75%)
Frame = +2 / +2
Query: 2090 TSTSTHGRSTAALTSPGWPGAXXXXXXXXXXHQQMPEPMRRSSWRIPWTLRTCHSVCPST 2269
TSTSTHGRSTAALTSPGW GA H+QM E M RSSWRIPWTLRTCHSVCPS
Sbjct: 2 TSTSTHGRSTAALTSPGWLGAG*GTRGG*RTHRQMLELMMRSSWRIPWTLRTCHSVCPSM 181
Query: 2270 V 2272
V
Sbjct: 182 V 184
Score = 72.1 bits (151), Expect(3) = e-109
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = -3 / -2
Query: 2280 ALLTVDGQTE*QVLSVHGILQELLLIGSGICWCVLQ 2173
ALLT+DGQTE*QVLSVHGILQELL+I S IC CVLQ
Sbjct: 192 ALLTIDGQTE*QVLSVHGILQELLIISSSICRCVLQ 85
Score = 69.3 bits (145), Expect(3) = e-109
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -1 / -3
Query: 2171 HLGFLNRHPATLVR*VRQCSGHE*RWM 2091
HLGFLNRHPATLVR*VRQCSGHE*RWM
Sbjct: 83 HLGFLNRHPATLVR*VRQCSGHE*RWM 3
Score = 35.4 bits (71), Expect(2) = 6e-070
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3 / -2
Query: 2136 GEVSAAVLRP*VEVDV 2089
GEVSAAVLRP*VEVDV
Sbjct: 48 GEVSAAVLRP*VEVDV 1
Score = 34.1 bits (68), Expect(2) = e-102
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -2 / -1
Query: 2734 QRPCSSPCQDSTP 2696
QR CSSPCQDSTP
Sbjct: 646 QRRCSSPCQDSTP 608
Score = 26.3 bits (51), Expect(3) = 2e-078
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2 / +2
Query: 2321 IKCXXXXXXXXXXQHFRRPCPQSQTV 2398
I+C Q FRR CP++ TV
Sbjct: 233 IRCRRS*TRSSSHQRFRRRCPRAVTV 310
>gb|CW111186.1|CW111186 104_484_11104164_116_34532_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104164, DNA
sequence
Length = 653
Score = 472 bits (1024), Expect = e-131
Identities = 202/217 (93%), Positives = 206/217 (94%)
Frame = +1 / -3
Query: 2227 SMDAQDLSLRLSIDGEKSSLNTNDPLSSDPQDQVQKIMNNIKQSSALPPSMSSVADGAKN 2406
SMDAQDLSLRLSIDGEKSSLNTNDPLSSDPQDQVQKIMN IKQSSALPPSMSS DGAKN
Sbjct: 651 SMDAQDLSLRLSIDGEKSSLNTNDPLSSDPQDQVQKIMNKIKQSSALPPSMSSGGDGAKN 472
Query: 2407 ATEATGSTMNKYPLLRRRRRLFVIAVDCYQDDGRASKKMLQVIQEVFRAVRSDSQMFKIS 2586
A EATG TMNKYPLLRRRRRLFVIAVDCY+DDGRASKKMLQVIQEVFRAVRSDSQM KIS
Sbjct: 471 AAEATGGTMNKYPLLRRRRRLFVIAVDCYEDDGRASKKMLQVIQEVFRAVRSDSQMSKIS 292
Query: 2587 GFTLSTAMPLSETLQLLQLGKIPATDFDALICGSGSEVYYPGTANCMDAEGKLRPDQDYL 2766
GF LSTAMPLSETLQLL+LGKIPATDFDALICGSGSEVYYPGT NC+DAEGKLRPDQDYL
Sbjct: 291 GFALSTAMPLSETLQLLKLGKIPATDFDALICGSGSEVYYPGTVNCIDAEGKLRPDQDYL 112
Query: 2767 MHISHRWSHDGARQTIAKLMGAQDGSGDAVEQDVASS 2877
MHISHRWSHDGARQTIAKLM +QDGS DAVE DVASS
Sbjct: 111 MHISHRWSHDGARQTIAKLMASQDGSDDAVELDVASS 1
Score = 412 bits (893), Expect = e-113
Identities = 171/200 (85%), Positives = 178/200 (89%)
Frame = +3 / -2
Query: 2226 FHGRSGPVTPSVHRR*EELAEHQRPTVVRPPGSSAEDHEQHQAVVSTSAVHVLSRRRCQE 2405
FHGRSGPVTPSVHR *EEL EH RPTVV P GS AEDHEQ QAV+S SAV VL R RCQE
Sbjct: 652 FHGRSGPVTPSVHRW*EELPEH*RPTVVGPAGSGAEDHEQDQAVISASAVDVLGR*RCQE 473
Query: 2406 RNRGHRQHHEQIPTPAPAPALVRHSCGLLPGRWPC*QEDAAGDPGSFQSSPIGLPDVQDL 2585
+RGHR+HHEQ+PTPAPAPA VRHSCGLL RWPC*QEDAAGDP SFQSSP+GLPDVQDL
Sbjct: 472 CSRGHRRHHEQVPTPAPAPAPVRHSCGLLRRRWPC*QEDAAGDPRSFQSSPVGLPDVQDL 293
Query: 2586 RVHAVDCHAVVRDTPASAARQDPSDRLRRPHLWQRQRGVLSWHGELHGR*RKAAPRSGLS 2765
RV AV+C AVVRDTPAS ARQDPSDRLRRPHLWQ QRGVLSWHGELH R*RKAAPR GLS
Sbjct: 292 RVRAVNCDAVVRDTPASEARQDPSDRLRRPHLWQWQRGVLSWHGELHRR*RKAAPRPGLS 113
Query: 2766 DAHQPPLVP*RREADHSEAH 2825
DAHQPPLVP*RREADHS+AH
Sbjct: 112 DAHQPPLVP*RREADHSKAH 53
Score = 373 bits (808), Expect(2) = e-107
Identities = 166/201 (82%), Positives = 171/201 (85%)
Frame = -1 / +2
Query: 2876 LDATSCSTASPEPS*APMSFAMVCLAPSWDQRWLMCIRXXXXXXXXXXXSMQFAVPG*YT 2697
LDATS STAS EPS* MSFAMVCLAPSWDQRWLMCIR SMQF VPG*YT
Sbjct: 2 LDATSSSTASSEPS*LAMSFAMVCLAPSWDQRWLMCIR*SWSGRSFPSASMQFTVPG*YT 181
Query: 2696 SLPLPQMRASKSVAGILPSCRSWSVSDNGMAVDSVNPEILNIWESDRTALKTSWITCSIF 2517
SLPLPQMRASKSVAGILPS RSWSVSDNG+AVDS NPEIL+IWESDRTALKTSWITCSIF
Sbjct: 182 SLPLPQMRASKSVAGILPSFRSWSVSDNGIAVDSANPEILDIWESDRTALKTSWITCSIF 361
Query: 2516 LLARPSSW*QSTAMTNKXXXXXRSGYLFMVLPVASVAFLAPSATEDMDGGSADDCLMLFM 2337
LLARPSS *QSTAMTN+ RSGYLFMV PVAS AFLAPS ED+DGGSADDCL+LFM
Sbjct: 362 LLARPSSS*QSTAMTNRRRRRRRSGYLFMVPPVASAAFLAPSPPEDIDGGSADDCLILFM 541
Query: 2336 IFCT*SWGSDDSGSLVFSELF 2274
IFCT*S GSDDSGSLVF ELF
Sbjct: 542 IFCT*SCGSDDSGSLVFRELF 604
Score = 352 bits (762), Expect = 3e-095
Identities = 149/170 (87%), Positives = 153/170 (90%)
Frame = -3 / +1
Query: 2874 GRHVLLDSVA*TVLSAHELRYGLPRAVMGPAVADVHQIVLIWAQLSFSVHAVRRARIVHL 2695
GRHV LDS+ *TVL+ HEL YGLPRAVMGPAVADVHQIVL+WAQLSFSV AV RARIVHL
Sbjct: 4 GRHVQLDSIV*TVLTGHELCYGLPRAVMGPAVADVHQIVLVWAQLSFSVDAVHRARIVHL 183
Query: 2694 AAAATDEGVEVGRWDLAELQKLECLGQRHGSRQREP*DLEHLGVRSDCSENFLDHLQHLL 2515
AA ATDEGVEVGRWDLAELQKLECLGQRH S QREP*DL HLGVR DCSENFLDHLQHLL
Sbjct: 184 AATATDEGVEVGRWDLAELQKLECLGQRHRS*QREP*DLGHLGVRPDCSENFLDHLQHLL 363
Query: 2514 ASTAIVLVAVHSYDEQAPAPAQEWVFVHGAACGLGCVLGTVCD*GHGRRK 2365
ASTAIV VAVHSYDEQAPAPAQEWV VHGAACGLGC+LGTV GH RRK
Sbjct: 364 ASTAIVFVAVHSYDEQAPAPAQEWVLVHGAACGLGCILGTVTARGHRRRK 513
Score = 295 bits (638), Expect(3) = 4e-087
Identities = 125/146 (85%), Positives = 131/146 (89%)
Frame = +2 / -1
Query: 2438 NTHSCAGAGACSS*LWTATRTMAVLARRCCR*SRKFSEQSDRTPRCSRSQGSRCRLPCRC 2617
+THSCAGAGACSS*LWTAT+TMAVLARRCCR*S+KFSEQS RTPRC RSQGSRC+L CRC
Sbjct: 440 STHSCAGAGACSS*LWTATKTMAVLARRCCR*SKKFSEQSGRTPRCPRSQGSRCQLRCRC 261
Query: 2618 PRHSSFCSSARSQRPTSTPSSVXXXXRCTILARRTAWTLKESCAQIRTI*CTSATAGPMT 2797
PRHSSF SSARSQRPTSTPSSV RCTILAR TA TLKESCAQ RTI*CTSATAGPMT
Sbjct: 260 PRHSSF*SSARSQRPTSTPSSVAVAARCTILAR*TASTLKESCAQTRTI*CTSATAGPMT 81
Query: 2798 ARGRP*RSSWALRTVQATLSSRTWRP 2875
ARGRP*+SSW +RTVQ LSS TWRP
Sbjct: 80 ARGRP*QSSWPVRTVQTMLSSWTWRP 3
Score = 257 bits (555), Expect(2) = e-101
Identities = 114/139 (82%), Positives = 115/139 (82%)
Frame = -2 / +3
Query: 2641 AAEAGVSRTTAWQSTA*TLRS*TSGSPIGLL*KLPGSPAASSC*HGHRPGSSPQL*RTSA 2462
A+EAGVSRTTA Q TA TLRS TSGSP GLL*KL GSPAASSC*HGHR SSPQL*RT A
Sbjct: 237 ASEAGVSRTTASQLTARTLRSWTSGSPTGLL*KLLGSPAASSC*HGHRLRSSPQL*RTGA 416
Query: 2461 GAGAGVGICSWCCLWPRLRSWHRLRLRTWTAEVLTTA*CCS*SSALDPGGRTTVGRWCSA 2282
GAGAGVG CSWC LWPRL SWHR R RT TAE L TA* CS*SSA DP G TTVGR CS
Sbjct: 417 GAGAGVGTCSWCRLWPRLHSWHRHRPRTSTAEALMTA*SCS*SSAPDPAGPTTVGR*CSG 596
Query: 2281 SSSHRRWTDGVTGPERPWN 2225
SSSH RWTDGVTGPERPWN
Sbjct: 597 SSSHHRWTDGVTGPERPWN 653
Score = 134 bits (287), Expect(2) = e-101
Identities = 54/60 (90%), Positives = 55/60 (91%)
Frame = -2 / +3
Query: 2875 WTPRPARQRRLNRPERP*ASLWSASRRHGTSGG*CASDSPDLGAAFLQRPCSSPCQDSTP 2696
WTPRPARQ RLNRP+ P*A LWSASRRHGTSGG*CASDSP LGAAFLQR CSSPCQDSTP
Sbjct: 3 WTPRPARQHRLNRPDWP*ALLWSASRRHGTSGG*CASDSPGLGAAFLQRRCSSPCQDSTP 182
Score = 43.7 bits (89), Expect(3) = 4e-087
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2 / -1
Query: 2225 IPWTLRTCHSVCPSTV 2272
IPWTLRTCHSVCPS V
Sbjct: 653 IPWTLRTCHSVCPSMV 606
Score = 40.9 bits (83), Expect(2) = e-107
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -3 / +1
Query: 2280 ALLTVDGQTE*QVLSVHG 2227
ALLT+DGQTE*QVLSVHG
Sbjct: 598 ALLTIDGQTE*QVLSVHG 651
Score = 26.3 bits (51), Expect(3) = 4e-087
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2 / -1
Query: 2321 IKCXXXXXXXXXXQHFRRPCPQSQTV 2398
I+C Q FRR CP++ TV
Sbjct: 557 IRCRRS*TRSSSHQRFRRRCPRAVTV 480
>gb|CL704230.2|CL704230 SP__Bb0012G11.f SP__Bb Sorghum propinquum genomic clone SP__Bb0012G11
5', DNA sequence
Length = 734
Score = 333 bits (721), Expect(3) = e-125
Identities = 140/146 (95%), Positives = 142/146 (97%)
Frame = +1 / -1
Query: 880 GESGGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNGRPVLPY 1059
GES GAYIVRIPCGPRD LKKEALWPYLQEFVDGALAHILNMSKALGEQVGNG+PVLPY
Sbjct: 458 GESAGAYIVRIPCGPRDNPLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNGKPVLPY 279
Query: 1060 VIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSKEEIDSTYKIMRRI 1239
VIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSK EIDSTYKIMRRI
Sbjct: 278 VIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSKAEIDSTYKIMRRI 99
Query: 1240 EGEELALDASELVITSTRQEIDEQWG 1317
EGEEL+LDASELVITSTRQEIDEQWG
Sbjct: 98 EGEELSLDASELVITSTRQEIDEQWG 21
Score = 331 bits (717), Expect(2) = e-119
Identities = 126/147 (85%), Positives = 131/147 (89%)
Frame = +3 / -3
Query: 879 G*EWRSLHCAHTVWAAG*IPQEGSVVALPPRVCRWSPCAYPEHVQGSGRAGWKWEASTAL 1058
G E RSLHCAHTVWA * PQEGS VALPPR+CRWS CAYPEHVQGSGRAGWKWEASTAL
Sbjct: 459 GRECRSLHCAHTVWATR*PPQEGSAVALPPRICRWSSCAYPEHVQGSGRAGWKWEASTAL 280
Query: 1059 RDTWALCRCWRCCCSPFWCAECANGAHWPLTWEEQAGTTAEARAHVQGGDRFDIQDHEAY 1238
RDTW LCRCWRCCCSP CAECA+GAHW LTWEEQAG TAEARAHV GDRF++QDHEAY
Sbjct: 279 RDTWTLCRCWRCCCSPLRCAECAHGAHWSLTWEEQAGATAEARAHV*SGDRFNLQDHEAY 100
Query: 1239 RG*GAGPGCVRACNHEHKAGD**AVGI 1319
RG*GA PGCVRAC+HEHKAGD** VGI
Sbjct: 99 RG*GAVPGCVRACHHEHKAGD**TVGI 19
Score = 301 bits (652), Expect(3) = e-112
Identities = 127/151 (84%), Positives = 129/151 (85%)
Frame = -2 / +2
Query: 1318 IPTAHQSPALCS*LQALTHPGPAPHPRYAS*SCMSNRSPPWTCALASAVVPACSSQVSGQ 1139
IPT HQSPALCS* QALTHPG APHPRYAS*SC N SP TCALASAV PACSSQVS Q
Sbjct: 20 IPTVHQSPALCS**QALTHPGTAPHPRYAS*SCRLNLSPL*TCALASAVAPACSSQVSDQ 199
Query: 1138 *APLAHSAHQKGEQQHLQHRHSAHVSRKAVLASHFQPALPEPWTCSGYAQGLHRQTLGGK 959
*AP AHSAH++GEQQHLQHRHS HVSRKAVLASHFQPALPEPWTCSGYAQ LHRQ LGGK
Sbjct: 200 *APWAHSAHRRGEQQHLQHRHSVHVSRKAVLASHFQPALPEPWTCSGYAQELHRQILGGK 379
Query: 958 ATTLPS*GIYPAAHTVCAQCRLRHSHPSPLH 866
AT LPS*G Y AHTVCAQCRLRHS P H
Sbjct: 380 ATALPS*GGYRVAHTVCAQCRLRHSRPPLHH 472
Score = 285 bits (617), Expect(3) = e-104
Identities = 123/145 (84%), Positives = 128/145 (88%)
Frame = +2 / -2
Query: 884 RVAEPTLCAYRVGRGINTSRRKRCGLTSKSLSMEPLRIS*TCPRLWESRLEMGGQYCLT* 1063
RV EPTLCAYRVG I SRRKRCGLTSK+LSME LRIS*TCPRLWESRLEMG QYCLT*
Sbjct: 454 RVPEPTLCAYRVGHAITPSRRKRCGLTSKNLSMELLRIS*TCPRLWESRLEMGSQYCLT* 275
Query: 1064 YMGTMPMLEMLLLSFLVR*MCQWCSLATHLGGTSWNNC*SKGACPRRRSIRHTRS*GVSR 1243
YM TMPMLEMLLLS VR*MC WCSL THLGGTSW+NC*SKGAC +RR I+ TRS*GVSR
Sbjct: 274 YMDTMPMLEMLLLSSPVR*MCPWCSLVTHLGGTSWSNC*SKGACLKRR*IQPTRS*GVSR 95
Query: 1244 VRSWPWMRQSL*SRAQGRRLMSSGD 1318
VRS PWMRQSL SRAQGRRLM+SGD
Sbjct: 94 VRSCPWMRQSLSSRAQGRRLMNSGD 20
Score = 177 bits (380), Expect(4) = 4e-084
Identities = 77/90 (85%), Positives = 78/90 (86%)
Frame = -3 / +3
Query: 1152 K*VASEHHWHIQRTRKESSNISSIGIVPMYHVRQYWPPISNLLSQSLGHVQDMRKGSIDK 973
K*V SEHH HIQRT +ESSNISSIGIV MYHVRQYW PISNLLSQSLGHVQDMRK SIDK
Sbjct: 186 K*VTSEHHGHIQRTGEESSNISSIGIVSMYHVRQYWLPISNLLSQSLGHVQDMRKSSIDK 365
Query: 972 LLEVRPQRFLLEVFIPRPTRYAHNVGSATL 883
LEVRPQRFLLE I PTRYAHNVGS TL
Sbjct: 366 FLEVRPQRFLLEGVIAWPTRYAHNVGSGTL 455
Score = 131 bits (280), Expect(4) = 3e-061
Identities = 54/57 (94%), Positives = 55/57 (96%)
Frame = -1 / +1
Query: 1064 IT*GSTGLPFPTCSPRALDMFRICARAPSTNSWR*GHNASFLRYLSRGPHGMRTM*A 894
IT*GSTG PFPTCSPRALDMFRICARAPSTNSWR*GH+ASFLR LSRGPHGMRTM*A
Sbjct: 274 IT*GSTGFPFPTCSPRALDMFRICARAPSTNSWR*GHSASFLRGLSRGPHGMRTM*A 444
Score = 126 bits (269), Expect(3) = e-125
Identities = 52/58 (89%), Positives = 54/58 (93%)
Frame = +1 / -1
Query: 718 QVKYVVELARAMSMMPGVYRVDLFTRQVSSLDVDWSYGEPTEMLCAGSNDGEGMGESG 891
QVKYVVELARAMSMMPGVYRVDLFTRQVSS DVDWSYGEPTEMLC+GSNDGEG +G
Sbjct: 617 QVKYVVELARAMSMMPGVYRVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGGESAG 444
Score = 122 bits (261), Expect(2) = e-119
Identities = 49/61 (80%), Positives = 53/61 (86%)
Frame = +2 / -2
Query: 695 VVILIQVAR*NMWSNLQERCQ*CLECTGWTSSLVKCHLLTWTGATVSQPRCYAPVPMMER 874
V ++ + R*NM SNLQ +CQ*CLECTGWTSSLVKCHLLTWTGA VSQ RCYAPVPMMER
Sbjct: 640 VRLIFESHR*NMLSNLQGQCQ*CLECTGWTSSLVKCHLLTWTGAMVSQRRCYAPVPMMER 461
Query: 875 G 877
G
Sbjct: 460 G 458
Score = 110 bits (235), Expect(3) = e-112
Identities = 46/52 (88%), Positives = 46/52 (88%)
Frame = -2 / +2
Query: 874 PLHHWNRRITSRLAHRSSSPRQEMTLDE*RGPPCTLQASLTSLLQVRPHISP 719
PLHHWNR ITS LAH SSSPRQEMTLDE*RGPPCTLQASLT LQVR HISP
Sbjct: 461 PLHHWNRSITSPLAHHSSSPRQEMTLDE*RGPPCTLQASLTLPLQVRQHISP 616
Score = 107 bits (228), Expect(3) = e-104
Identities = 46/52 (88%), Positives = 47/52 (90%)
Frame = +3 / -3
Query: 720 GEICGRTCKSDVNDAWSVQGGPLHSSSVIS*RGLELR*ANRDVMRRFQ*WRG 875
GEIC RTCK +VNDAWSVQGGPLHSSSVIS*RGLEL *AN DVM RFQ*WRG
Sbjct: 615 GEICCRTCKGNVNDAWSVQGGPLHSSSVIS*RGLELW*ANGDVMLRFQ*WRG 460
Score = 96.8 bits (205), Expect(4) = 4e-084
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = -1 / +1
Query: 851 HNISVGSP*LQSTSRDDT*RVKRSTLYTPGIIDIALASSTTYFT 720
HNISVGSP*LQSTS DDT*RVKRSTLYTPGIIDIALASSTTYFT
Sbjct: 484 HNISVGSP*LQSTSGDDT*RVKRSTLYTPGIIDIALASSTTYFT 615
Score = 77.6 bits (163), Expect(4) = 3e-061
Identities = 39/67 (58%), Positives = 42/67 (62%)
Frame = -1 / +1
Query: 1319 NPHCSSISCLVLVITXXXXXXXXXXXSIRLMILYVESISSLDMRXXXXXXXXXXXXSEWP 1140
NPHCSSISCLVLV+T SIRLMIL VESIS+LDMR SE P
Sbjct: 19 NPHCSSISCLVLVMTSSDASRDSSSPSIRLMIL*VESISALDMRPCFSSCSSLFLPSE*P 198
Query: 1139 VSTIGTF 1119
VST+GTF
Sbjct: 199 VSTMGTF 219
Score = 73.9 bits (155), Expect(4) = 4e-084
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = -3 / +3
Query: 1320 QSPLLINLLPCARDYKL*RIQGQLLTLDTPHDLV 1219
+SPL INLLPCARD KL*RIQGQLLTLDTPHDLV
Sbjct: 18 ESPLFINLLPCARDDKL*RIQGQLLTLDTPHDLV 119
Score = 62.5 bits (130), Expect(4) = 3e-061
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -3 / +3
Query: 876 PLSIIGTGA*HLGWLTVAPVHVKR*HLT 793
PLSIIGTGA*HL WLT+APVHV+R*HLT
Sbjct: 459 PLSIIGTGA*HLRWLTIAPVHVRR*HLT 542
Score = 36.3 bits (73), Expect(3) = e-112
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -1 / +3
Query: 725 FTWPPVSESRPSS 687
FTWPPVSESRPSS
Sbjct: 696 FTWPPVSESRPSS 734
Score = 32.7 bits (65), Expect(3) = e-125
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +1 / -2
Query: 688 ELGRDSDTGGQVKYVV 735
ELGRDSDTGGQV ++
Sbjct: 733 ELGRDSDTGGQVNILI 686
Score = 30.4 bits (60), Expect(3) = e-104
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +3 / -1
Query: 687 GTRS*F*YRWPGE 725
GTRS*F*+RWPG+
Sbjct: 734 GTRS*F*HRWPGK 696
Score = 25.8 bits (50), Expect(4) = 4e-084
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / +1
Query: 721 PGHLYQNHDLV 689
PGH QNHDLV
Sbjct: 700 PGHRCQNHDLV 732
Score = 25.4 bits (49), Expect(4) = 3e-061
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / +3
Query: 744 CKFDHIFHL 718
CKFD+IFHL
Sbjct: 591 CKFDNIFHL 617
>gb|CW274351.1|CW274351 104_747_11404381_148_35370_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404381, DNA
sequence
Length = 712
Score = 434 bits (942), Expect = e-120
Identities = 183/202 (90%), Positives = 190/202 (94%)
Frame = +1 / -1
Query: 2320 DQVQKIMNNIKQSSALPPSMSSVADGAKNATEATGSTMNKYPLLRRRRRLFVIAVDCYQD 2499
DQVQ+IMN IKQSSALPPSMSS DGAKNA EATG TMNKYPLLRRRRRLFVIAVDCY+D
Sbjct: 712 DQVQRIMNKIKQSSALPPSMSSGGDGAKNAAEATGGTMNKYPLLRRRRRLFVIAVDCYED 533
Query: 2500 DGRASKKMLQVIQEVFRAVRSDSQMFKISGFTLSTAMPLSETLQLLQLGKIPATDFDALI 2679
DGRASKKMLQVIQEVFRAVRSDSQM KISGF LSTAMPLSETLQLL+LGKIPATDFDALI
Sbjct: 532 DGRASKKMLQVIQEVFRAVRSDSQMSKISGFALSTAMPLSETLQLLKLGKIPATDFDALI 353
Query: 2680 CGSGSEVYYPGTANCMDAEGKLRPDQDYLMHISHRWSHDGARQTIAKLMGAQDGSGDAVE 2859
CGSGSEVYYPGT NC+DAEGKLRPDQDYLMHISHRWSHDGARQTIAKLM +QDGS DAVE
Sbjct: 352 CGSGSEVYYPGTVNCIDAEGKLRPDQDYLMHISHRWSHDGARQTIAKLMASQDGSDDAVE 173
Query: 2860 QDVASSNAHCVAFLIKDPQKVK 2925
DVASSNAHC AFLIKDP+KV+
Sbjct: 172 LDVASSNAHCFAFLIKDPKKVR 107
Score = 375 bits (814), Expect(2) = e-103
Identities = 158/186 (84%), Positives = 165/186 (88%)
Frame = -3 / +2
Query: 2922 HLLGVFDEERDTVCITGRHVLLDSVA*TVLSAHELRYGLPRAVMGPAVADVHQIVLIWAQ 2743
+L G+FDEER+ VCI GRHV LDS+ *TVL+ HEL YGLPRAVMGPAVADVHQIVL+WAQ
Sbjct: 110 NLFGIFDEEREAVCIAGRHVQLDSIV*TVLTGHELCYGLPRAVMGPAVADVHQIVLVWAQ 289
Query: 2742 LSFSVHAVRRARIVHLAAAATDEGVEVGRWDLAELQKLECLGQRHGSRQREP*DLEHLGV 2563
LSFSV AV RARIVHLAA ATDEGVEVGRWDLAELQKLECLGQRH S QREP*DL HLGV
Sbjct: 290 LSFSVDAVHRARIVHLAATATDEGVEVGRWDLAELQKLECLGQRHRS*QREP*DLGHLGV 469
Query: 2562 RSDCSENFLDHLQHLLASTAIVLVAVHSYDEQAPAPAQEWVFVHGAACGLGCVLGTVCD* 2383
R DCSENFLDHLQHLLASTAIV VAVHSYDEQAPAPAQEWV VHGAACGLGC+LGTV
Sbjct: 470 RPDCSENFLDHLQHLLASTAIVFVAVHSYDEQAPAPAQEWVLVHGAACGLGCILGTVTAR 649
Query: 2382 GHGRRK 2365
H RRK
Sbjct: 650 RHRRRK 667
Score = 371 bits (805), Expect = e-101
Identities = 156/200 (78%), Positives = 163/200 (81%)
Frame = +3 / -3
Query: 2322 SSAEDHEQHQAVVSTSAVHVLSRRRCQERNRGHRQHHEQIPTPAPAPALVRHSCGLLPGR 2501
S AEDHEQ QAV+S SAV V R RCQE +RGHR+HHEQ+PTPAPAPA VRHSCGLL R
Sbjct: 710 SGAEDHEQDQAVISASAVDVFGR*RCQECSRGHRRHHEQVPTPAPAPAPVRHSCGLLRRR 531
Query: 2502 WPC*QEDAAGDPGSFQSSPIGLPDVQDLRVHAVDCHAVVRDTPASAARQDPSDRLRRPHL 2681
WPC*QEDAAGDP SFQSSP+GLPDVQDLRV AV+C AVVRDTPAS ARQDPSDRLRRPHL
Sbjct: 530 WPC*QEDAAGDPRSFQSSPVGLPDVQDLRVRAVNCDAVVRDTPASEARQDPSDRLRRPHL 351
Query: 2682 WQRQRGVLSWHGELHGR*RKAAPRSGLSDAHQPPLVP*RREADHSEAHXXXXXXXXXXXX 2861
WQ QRGVLSWHGELH R*RKAAPR GLSDAHQPPLVP*RREADHS+AH
Sbjct: 350 WQWQRGVLSWHGELHRR*RKAAPRPGLSDAHQPPLVP*RREADHSKAHGQSGRFRRCCRA 171
Query: 2862 XXXVQ*CTLCRVPHQRPPKG 2921
VQ CTL RVPHQR KG
Sbjct: 170 GRGVQQCTLLRVPHQRSQKG 111
Score = 369 bits (800), Expect = e-100
Identities = 164/200 (82%), Positives = 169/200 (84%)
Frame = -1 / +3
Query: 2921 TFWGSLMRNATQCALLDATSCSTASPEPS*APMSFAMVCLAPSWDQRWLMCIRXXXXXXX 2742
TF GSLMRNA QCALLDATS STAS EPS* MSFAMVCLAPSWDQRWLMCIR
Sbjct: 111 TFLGSLMRNAKQCALLDATSSSTASSEPS*LAMSFAMVCLAPSWDQRWLMCIR*SWSGRS 290
Query: 2741 XXXXSMQFAVPG*YTSLPLPQMRASKSVAGILPSCRSWSVSDNGMAVDSVNPEILNIWES 2562
SMQF VPG*YTSLPLPQMRASKSVAGILPS RSWSVSDNG+AVDS NPEIL+IWES
Sbjct: 291 FPSASMQFTVPG*YTSLPLPQMRASKSVAGILPSFRSWSVSDNGIAVDSANPEILDIWES 470
Query: 2561 DRTALKTSWITCSIFLLARPSSW*QSTAMTNKXXXXXRSGYLFMVLPVASVAFLAPSATE 2382
DRTALKTSWITCSIFLLARPSS *QSTAMTN+ RSGYLFMV PVAS AFLAPS E
Sbjct: 471 DRTALKTSWITCSIFLLARPSSS*QSTAMTNRRRRRRRSGYLFMVPPVASAAFLAPSPPE 650
Query: 2381 DMDGGSADDCLMLFMIFCT* 2322
D+DGGSADDCL+LFMI CT*
Sbjct: 651 DIDGGSADDCLILFMILCT* 710
Score = 303 bits (656), Expect = 1e-080
Identities = 128/150 (85%), Positives = 134/150 (89%)
Frame = +2 / -2
Query: 2438 NTHSCAGAGACSS*LWTATRTMAVLARRCCR*SRKFSEQSDRTPRCSRSQGSRCRLPCRC 2617
+THSCAGAGACSS*LWTAT+TMAVLARRCCR*S+KFSEQS RTPRC RSQGSRC+L CRC
Sbjct: 594 STHSCAGAGACSS*LWTATKTMAVLARRCCR*SKKFSEQSGRTPRCPRSQGSRCQLRCRC 415
Query: 2618 PRHSSFCSSARSQRPTSTPSSVXXXXRCTILARRTAWTLKESCAQIRTI*CTSATAGPMT 2797
PRHSSF SSARSQRPTSTPSSV RCTILAR TA TLKESCAQ RTI*CTSATAGPMT
Sbjct: 414 PRHSSF*SSARSQRPTSTPSSVAVAARCTILAR*TASTLKESCAQTRTI*CTSATAGPMT 235
Query: 2798 ARGRP*RSSWALRTVQATLSSRTWRPVMHT 2887
ARGRP*+SSW +RTVQ LSS TWRP MHT
Sbjct: 234 ARGRP*QSSWPVRTVQTMLSSWTWRPAMHT 145
Score = 185 bits (398), Expect(2) = 5e-084
Identities = 86/107 (80%), Positives = 88/107 (82%)
Frame = -2 / +1
Query: 2641 AAEAGVSRTTAWQSTA*TLRS*TSGSPIGLL*KLPGSPAASSC*HGHRPGSSPQL*RTSA 2462
A+EAGVSRTTA Q TA TLRS TSGSP GLL*KL GSPAASSC*HGHR SSPQL*RT A
Sbjct: 391 ASEAGVSRTTASQLTARTLRSWTSGSPTGLL*KLLGSPAASSC*HGHRLRSSPQL*RTGA 570
Query: 2461 GAGAGVGICSWCCLWPRLRSWHRLRLRTWTAEVLTTA*CCS*SSALD 2321
GAGAGVG CSWC LWPRL SWHR R +T TAE L TA* CS*SSA D
Sbjct: 571 GAGAGVGTCSWCRLWPRLHSWHRHRPKTSTAEALMTA*SCS*SSAPD 711
Score = 150 bits (322), Expect(2) = 5e-084
Identities = 63/71 (88%), Positives = 64/71 (90%)
Frame = -2 / +1
Query: 2908 L**GTRHSVHYWTPRPARQRRLNRPERP*ASLWSASRRHGTSGG*CASDSPDLGAAFLQR 2729
L**GTR SVH WTPRPARQ RLNRP+ P*A LWSASRRHGTSGG*CASDSP LGAAFLQR
Sbjct: 124 L**GTRSSVHCWTPRPARQHRLNRPDWP*ALLWSASRRHGTSGG*CASDSPGLGAAFLQR 303
Query: 2728 PCSSPCQDSTP 2696
CSSPCQDSTP
Sbjct: 304 RCSSPCQDSTP 336
Score = 24.4 bits (47), Expect(2) = e-103
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / +1
Query: 2940 HLIDRFHLL 2914
HLIDRFHL+
Sbjct: 4 HLIDRFHLI 30
>gb|CN131044.1|CN131044 RHOH1_45_B03.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_45_B03_A002 5', mRNA sequence
Length = 860
Score = 315 bits (682), Expect(2) = e-120
Identities = 125/186 (67%), Positives = 156/186 (83%)
Frame = +1 / +1
Query: 892 GAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNGRPVLPYVIHG 1071
GA+I+RIP GP+DK+L KE +WP++QEFVDGALAHI+ MSK +G++ G+ PV P VIHG
Sbjct: 1 GAHIIRIPFGPKDKHLAKENIWPFIQEFVDGALAHIVRMSKTIGKETGSVCPVWPAVIHG 180
Query: 1072 HYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSKEEIDSTYKIMRRIEGEE 1251
HY+ AG AALLSGALNVPMV TGH LG++KLE LLKQGR ++E+I+ TYKIMRRIE EE
Sbjct: 181 HYSSAGVAAALLSGALNVPMVFTGHFLGKDKLEGLLKQGRQTREQINVTYKIMRRIEAEE 360
Query: 1252 LALDASELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVSCHGRYMPRMVVIPPGM 1431
L+LDASE+VI STRQEI+EQW LYDGF+V L + LRA +RG C+GRYMPRMV+IPPG+
Sbjct: 361 LSLDASEIVIASTRQEIEEQWNLYDGFEVMLARKLRALVKRGAHCYGRYMPRMVIIPPGV 540
Query: 1432 DFSNVV 1449
+F ++
Sbjct: 541 EFGQLI 558
Score = 139 bits (299), Expect(2) = e-120
Identities = 58/82 (70%), Positives = 68/82 (82%)
Frame = +1 / +1
Query: 1528 PPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDI 1707
P IW E+MRF TNP KPMILA++RP +KNI TLVKAFGEC PLRELANLTLIMGNR+ I
Sbjct: 613 PSIWFEIMRFFTNPRKPMILAIARPYAEKNIATLVKAFGECHPLRELANLTLIMGNREAI 792
Query: 1708 DDMSAGNASVLTTVLKLIDKYD 1773
M+ +A+VLT+VL LID+YD
Sbjct: 793 SKMNKVSAAVLTSVLTLIDEYD 858
Score = 102 bits (217), Expect(2) = 8e-022
Identities = 51/157 (32%), Positives = 79/157 (50%)
Frame = +3 / +3
Query: 954 VALPPRVCRWSPCAYPEHVQGSGRAGWKWEASTALRDTWALCRCWRCCCSPFWCAECANG 1133
+A R+C W +Y HV+ + W+ +S A D+W L +C CCCS W C++G
Sbjct: 63 LAFHSRIC*WCASSYCAHVKNYRQRNWQCVSSVACCDSWPLFQCRSCCCSTIWST*CSHG 242
Query: 1134 AHWPLTWEEQAGTTAEARAHVQGGDRFDIQDHEAYRG*GAGPGCVRACNHEHKAGD**AV 1313
+ +WE A ++AR + ++ DIQ++ G G C+ +HKA + +
Sbjct: 243 VYRSFSWER*ARRASQARETDKRTNKRDIQNNAPN*GRGVVT*CI*NSYRKHKARNRRTM 422
Query: 1314 GIVRWI*CQA*ESAEGTGEARG*LPWSLHA*DGGDSS 1424
+VRW * A E A +A L WSL+A G +SS
Sbjct: 423 ELVRWF*SHACEEAPCVSQAWRSLLWSLYASYGYNSS 533
Score = 88.6 bits (187), Expect(3) = 3e-041
Identities = 44/83 (53%), Positives = 54/83 (65%)
Frame = -1 / -1
Query: 1775 RSYLSISFRTVVRTLALPADMSSMSSLLPMIRVRFASSLSGRHSPNALTRVVMFFFGSGL 1596
+SY SI+ T V+T AL + ++S LP+I VR ASSL+G HSPNA T V +FF G
Sbjct: 860 KSYSSINVSTDVKTAALTLFILEIASRLPIINVRLASSLNGWHSPNAFTSVAIFFSAYGR 681
Query: 1595 DNARIIGL*GLVRNRITSAQIGG 1527
ARIIG G V+NRI S QI G
Sbjct: 680 AIARIIGFLGFVKNRIISNQIDG 612
Score = 86.8 bits (183), Expect(3) = 3e-041
Identities = 43/76 (56%), Positives = 47/76 (61%)
Frame = -1 / -1
Query: 1424 GGITTILGM*RPWQLTPRLARALSTFSSLTSNPSYNPHCSSISCLVLVITXXXXXXXXXX 1245
GGI TI G+*RP Q PRL A S +S+TS PSY HCSSISCLVL IT
Sbjct: 533 GGIITIRGI*RP*Q*APRLTNARSFLASMTSKPSYKFHCSSISCLVLAITISDASSDNSS 354
Query: 1244 XSIRLMILYVESISSL 1197
SIR +ILYV I SL
Sbjct: 353 ASIRRIILYVTFICSL 306
Score = 44.1 bits (90), Expect(3) = 3e-041
Identities = 25/52 (48%), Positives = 27/52 (51%)
Frame = -1 / -1
Query: 1064 IT*GSTGLPFPTCSPRALDMFRICARAPSTNSWR*GHNASFLRYLSRGPHGM 909
IT G TG P P DM I A APSTNS G S R LS GP+G+
Sbjct: 173 ITAGHTGHTLPVSLPIVFDMRTI*ASAPSTNS*MKGQIFSLARCLSLGPNGI 18
Score = 29.9 bits (59), Expect(2) = 8e-022
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3 / +3
Query: 1632 QSVWRVSSTQGTCKPYSDHG 1691
+ +W + S +GTC PY D+G
Sbjct: 717 EGIW*MPSVEGTC*PYIDNG 776
>gb|CL174512.1|CL174512 104_379_10891685_116_31769_053 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10891685, DNA
sequence
Length = 687
Score = 387 bits (839), Expect(2) = e-116
Identities = 160/166 (96%), Positives = 161/166 (96%)
Frame = +1 / -3
Query: 1972 ALNNGLLVDPHDQNAIADALLKLVADKNLWQECRRNGLRNIHLYSWPEHCRTYLTRVAGC 2151
ALNNGLLVDPHDQNAIADALLKLVADKNLWQECRRNGLRNIHLYSWPEHCRTYLTRVAGC
Sbjct: 499 ALNNGLLVDPHDQNAIADALLKLVADKNLWQECRRNGLRNIHLYSWPEHCRTYLTRVAGC 320
Query: 2152 RLRNPRWLKDTPADAGADEEEFLEDSMDAQDLSLRLSIDGEKSSLNTNDPLSSDPQDQVQ 2331
RLRNPRWLKDTPADAGAD+EEFLEDSMDAQDLSLRLSIDGEKSSLNTNDPLSSDPQDQVQ
Sbjct: 319 RLRNPRWLKDTPADAGADDEEFLEDSMDAQDLSLRLSIDGEKSSLNTNDPLSSDPQDQVQ 140
Query: 2332 KIMNNIKQSSALPPSMSSVADGAKNATEATGSTMNKYPLLRRRRRL 2469
KIMN IKQSSALPPSMSS DGAKNA EATG TMNKYPLLRRRRRL
Sbjct: 139 KIMNKIKQSSALPPSMSSGGDGAKNAAEATGGTMNKYPLLRRRRRL 2
Score = 345 bits (747), Expect(2) = e-102
Identities = 139/164 (84%), Positives = 142/164 (86%)
Frame = -2 / +1
Query: 2470 TSAGAGAGVGICSWCCLWPRLRSWHRLRLRTWTAEVLTTA*CCS*SSALDPGGRTTVGRW 2291
T AGAGAGVG CSWC LWPRL SWHR R RT TAE L TA* CS*SSA DP G TTVGR
Sbjct: 1 TGAGAGAGVGTCSWCRLWPRLHSWHRHRPRTSTAEALMTA*SCS*SSAPDPAGPTTVGR* 180
Query: 2290 CSASSSHRRWTDGVTGPERPWNPPGTPPHRLRHLLVCPSATSGSLTGTRPPW*GKCGSAP 2111
CS SSSH RWTDGVTGPERPWNPPGTP H+L+HL VCPSATSGSLTGT+PPW*GKCGSAP
Sbjct: 181 CSGSSSHHRWTDGVTGPERPWNPPGTPHHQLQHLPVCPSATSGSLTGTQPPW*GKCGSAP 360
Query: 2110 AMSRGGCCAARFSGIPATGSCLPQASAVHQRWRSGRVGQRAVRC 1979
AMSRGGCCAARFSG PATGS PQASAVHQRWRSGRVGQRAV C
Sbjct: 361 AMSRGGCCAARFSGTPATGSYPPQASAVHQRWRSGRVGQRAVHC 492
Score = 324 bits (702), Expect(2) = 2e-096
Identities = 137/163 (84%), Positives = 143/163 (87%)
Frame = +3 / -2
Query: 1977 KQRTAR*PTRPERHR*CTAEACGRQEPVAGMPEKRAAQHPPLLMAGALPHLPHQGGRVPV 2156
+Q TAR*PTRPERHR*CTAEACG EPVAG+PEKRAAQHPPLLMAGALPHLPHQGG VPV
Sbjct: 494 EQWTAR*PTRPERHR*CTAEACGG*EPVAGVPEKRAAQHPPLLMAGALPHLPHQGGWVPV 315
Query: 2157 KEPEVAEGHTSRCRSR*GGVPGGFHGRSGPVTPSVHRR*EELAEHQRPTVVRPPGSSAED 2336
KEPEVAEGHT RC S * GVPGGFHGRSGPVTPSVHR *EEL EH RPTVV P GS AED
Sbjct: 314 KEPEVAEGHTGRCWS***GVPGGFHGRSGPVTPSVHRW*EELPEH*RPTVVGPAGSGAED 135
Query: 2337 HEQHQAVVSTSAVHVLSRRRCQERNRGHRQHHEQIPTPAPAPA 2465
HEQ QAV+S SAV VL R RCQE +RGHR+HHEQ+PTPAPAPA
Sbjct: 134 HEQDQAVISASAVDVLGR*RCQECSRGHRRHHEQVPTPAPAPA 6
Score = 197 bits (425), Expect(4) = 1e-059
Identities = 80/100 (80%), Positives = 83/100 (83%)
Frame = +2 / -1
Query: 1973 H*TTDCSLTHTTRTPSLMHC*SLWQTRTCGRNAGETGCATSTSTHGRSTAALTSPGWPGA 2152
H*T DCSLTHTTRTPSLMHC*SLW+ RTCGR+AGETGCATSTSTHGRSTAALTSPGW GA
Sbjct: 498 H*TMDCSLTHTTRTPSLMHC*SLWRIRTCGRSAGETGCATSTSTHGRSTAALTSPGWLGA 319
Query: 2153 XXXXXXXXXXHQQMPEPMRRSSWRIPWTLRTCHSVCPSTV 2272
H+QM E M RSSWRIPWTLRTCHSVCPS V
Sbjct: 318 G*GTRGG*RTHRQMLELMMRSSWRIPWTLRTCHSVCPSMV 199
Score = 122 bits (261), Expect(4) = 9e-080
Identities = 50/67 (74%), Positives = 51/67 (76%)
Frame = -1 / +3
Query: 2171 HLGFLNRHPATLVR*VRQCSGHE*RWMLRSPFLRHSCHRXXXXXXXXXXXXXXXXSCGST 1992
HLGFLNRHPATLVR*VRQCSGHE*RWMLRSPFLRHSCHR SCGST
Sbjct: 300 HLGFLNRHPATLVR*VRQCSGHE*RWMLRSPFLRHSCHRFLSATSFSSASAMAFWSCGST 479
Query: 1991 SSPLFNA 1971
SSPLF+A
Sbjct: 480 SSPLFSA 500
Score = 117 bits (251), Expect(2) = 5e-040
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = -3 / +2
Query: 2136 GEVSAAVLRP*VEVDVAQPVSPAFLPQVLVCHKLQQCISDGVLVVWVNEQSVV*CI 1969
GEVSAAVLRP*VEVDVAQPVSPA LPQVL+ HKLQQCISDGVLVVWVNEQS+V C+
Sbjct: 335 GEVSAAVLRP*VEVDVAQPVSPALLPQVLIRHKLQQCISDGVLVVWVNEQSIVQCL 502
Score = 116 bits (249), Expect(4) = 9e-080
Identities = 50/58 (86%), Positives = 52/58 (89%)
Frame = -1 / +3
Query: 2447 SGYLFMVLPVASVAFLAPSATEDMDGGSADDCLMLFMIFCT*SWGSDDSGSLVFSELF 2274
SGYLFMV PVAS AFLAPS ED+DGGSADDCL+LFMIFCT*S GSDDSGSLVF ELF
Sbjct: 24 SGYLFMVPPVASAAFLAPSPPEDIDGGSADDCLILFMIFCT*SCGSDDSGSLVFRELF 197
Score = 75.3 bits (158), Expect(2) = 5e-040
Identities = 29/35 (82%), Positives = 30/35 (85%)
Frame = -3 / +2
Query: 2469 QAPAPAQEWVFVHGAACGLGCVLGTVCD*GHGRRK 2365
QAPAPAQEWV VHGAACGLGC+LGTV GH RRK
Sbjct: 2 QAPAPAQEWVLVHGAACGLGCILGTVTARGHRRRK 106
Score = 72.1 bits (151), Expect(4) = 9e-080
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = -3 / +2
Query: 2280 ALLTVDGQTE*QVLSVHGILQELLLIGSGICWCVLQ 2173
ALLT+DGQTE*QVLSVHGILQELL+I S IC CVLQ
Sbjct: 191 ALLTIDGQTE*QVLSVHGILQELLIISSSICRCVLQ 298
Score = 57.4 bits (119), Expect(2) = e-116
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3 / -1
Query: 1908 GCGTRTPDSRYQEWWSGRHYKCIK 1979
GCGTRT +SRYQEWWS RHY C K
Sbjct: 660 GCGTRTSNSRYQEWWSSRHYNCEK 589
Score = 52.4 bits (108), Expect(2) = 2e-096
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +1 / -2
Query: 1909 AAAHGLPIVATKNGGPVDITNALNN 1983
AAAHGLPIVATKNGGPVDIT N+
Sbjct: 659 AAAHGLPIVATKNGGPVDITTVRNH 585
Score = 51.0 bits (105), Expect(2) = e-102
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -1 / +1
Query: 1979 FNAFVMSTGPPFLVATIGSPCAAA 1908
F VMSTGPPFLVATIGSPCAAA
Sbjct: 589 FLTVVMSTGPPFLVATIGSPCAAA 660
Score = 47.3 bits (97), Expect(4) = 9e-080
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -2 / +2
Query: 1969 L*CRPDHHSW*RLSGVRVPQPRS 1901
L*CR DHHSW*RL VRVPQP+S
Sbjct: 599 L*CRLDHHSW*RLLEVRVPQPKS 667
Score = 36.3 bits (73), Expect(4) = 1e-059
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +2 / -3
Query: 1916 HTDSR*SLPRMVVRSTLQM 1972
HTD +*SLPRMVV+STLQ+
Sbjct: 652 HTDFQ*SLPRMVVQSTLQL 596
Score = 30.4 bits (60), Expect(4) = 1e-059
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / -1
Query: 2438 NTHSCAGAGAC 2470
+THSCAGAGAC
Sbjct: 33 STHSCAGAGAC 1
Score = 26.3 bits (51), Expect(4) = 1e-059
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2 / -1
Query: 2321 IKCXXXXXXXXXXQHFRRPCPQSQTV 2398
I+C Q FRR CP++ TV
Sbjct: 150 IRCRRS*TRSSSHQRFRRRCPRAVTV 73
>gb|CW274350.1|CW274350 104_747_11404381_116_35374_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404381, DNA
sequence
Length = 668
Score = 376 bits (816), Expect(2) = e-113
Identities = 155/162 (95%), Positives = 156/162 (96%)
Frame = +1 / +1
Query: 1972 ALNNGLLVDPHDQNAIADALLKLVADKNLWQECRRNGLRNIHLYSWPEHCRTYLTRVAGC 2151
ALNNGLLVDPHDQNAIADALLKLVADKNLWQECRRNGLRNIHLYSWPEHCRTYLTRVAGC
Sbjct: 181 ALNNGLLVDPHDQNAIADALLKLVADKNLWQECRRNGLRNIHLYSWPEHCRTYLTRVAGC 360
Query: 2152 RLRNPRWLKDTPADAGADEEEFLEDSMDAQDLSLRLSIDGEKSSLNTNDPLSSDPQDQVQ 2331
RLRNPRWLKDTPADAGAD+EEFLEDSMDAQDLSLRLSIDGEKSSLNTNDPLSSDPQDQVQ
Sbjct: 361 RLRNPRWLKDTPADAGADDEEFLEDSMDAQDLSLRLSIDGEKSSLNTNDPLSSDPQDQVQ 540
Query: 2332 KIMNNIKQSSALPPSMSSVADGAKNATEATGSTMNKYPLLRR 2457
KIMN IKQSSALPPSMSS DGAKNA E TG TMNKYPLLRR
Sbjct: 541 KIMNKIKQSSALPPSMSSGGDGAKNAAEVTGGTMNKYPLLRR 666
Score = 331 bits (717), Expect(2) = 5e-098
Identities = 135/160 (84%), Positives = 138/160 (86%)
Frame = -2 / -2
Query: 2458 AGAGVGICSWCCLWPRLRSWHRLRLRTWTAEVLTTA*CCS*SSALDPGGRTTVGRWCSAS 2279
AGAGVG CSWC L PRL SWHR R RT TAE L TA* CS*SSA DP G TTVGR CS S
Sbjct: 667 AGAGVGTCSWCRL*PRLHSWHRHRPRTSTAEALMTA*SCS*SSAPDPAGPTTVGR*CSGS 488
Query: 2278 SSHRRWTDGVTGPERPWNPPGTPPHRLRHLLVCPSATSGSLTGTRPPW*GKCGSAPAMSR 2099
SSH RWTDGVTGPERPWNPPGTP H+L+HL VCPSATSGSLTGT+PPW*GKCGSAPAMSR
Sbjct: 487 SSHHRWTDGVTGPERPWNPPGTPHHQLQHLPVCPSATSGSLTGTQPPW*GKCGSAPAMSR 308
Query: 2098 GGCCAARFSGIPATGSCLPQASAVHQRWRSGRVGQRAVRC 1979
GGCCAARFSG PATGS PQASAVHQRWRSGRVGQRAV C
Sbjct: 307 GGCCAARFSGTPATGSYPPQASAVHQRWRSGRVGQRAVHC 188
Score = 319 bits (691), Expect(2) = 4e-095
Identities = 135/161 (83%), Positives = 141/161 (87%)
Frame = +3 / +3
Query: 1977 KQRTAR*PTRPERHR*CTAEACGRQEPVAGMPEKRAAQHPPLLMAGALPHLPHQGGRVPV 2156
+Q TAR*PTRPERHR*CTAEACG EPVAG+PEKRAAQHPPLLMAGALPHLPHQGG VPV
Sbjct: 186 EQWTAR*PTRPERHR*CTAEACGG*EPVAGVPEKRAAQHPPLLMAGALPHLPHQGGWVPV 365
Query: 2157 KEPEVAEGHTSRCRSR*GGVPGGFHGRSGPVTPSVHRR*EELAEHQRPTVVRPPGSSAED 2336
KEPEVAEGHT RC S * GVPGGFHGRSGPVTPSVHR *EEL EH RPTVV P GS AED
Sbjct: 366 KEPEVAEGHTGRCWS***GVPGGFHGRSGPVTPSVHRW*EELPEH*RPTVVGPAGSGAED 545
Query: 2337 HEQHQAVVSTSAVHVLSRRRCQERNRGHRQHHEQIPTPAPA 2459
HEQ QAV+S SAV VL R RCQE +RGHR+HHEQ+PTPAPA
Sbjct: 546 HEQDQAVISASAVDVLGR*RCQECSRGHRRHHEQVPTPAPA 668
Score = 197 bits (425), Expect(3) = 7e-059
Identities = 80/100 (80%), Positives = 83/100 (83%)
Frame = +2 / +2
Query: 1973 H*TTDCSLTHTTRTPSLMHC*SLWQTRTCGRNAGETGCATSTSTHGRSTAALTSPGWPGA 2152
H*T DCSLTHTTRTPSLMHC*SLW+ RTCGR+AGETGCATSTSTHGRSTAALTSPGW GA
Sbjct: 182 H*TMDCSLTHTTRTPSLMHC*SLWRIRTCGRSAGETGCATSTSTHGRSTAALTSPGWLGA 361
Query: 2153 XXXXXXXXXXHQQMPEPMRRSSWRIPWTLRTCHSVCPSTV 2272
H+QM E M RSSWRIPWTLRTCHSVCPS V
Sbjct: 362 G*GTRGG*RTHRQMLELMMRSSWRIPWTLRTCHSVCPSMV 481
Score = 122 bits (261), Expect(4) = 6e-079
Identities = 50/67 (74%), Positives = 51/67 (76%)
Frame = -1 / -1
Query: 2171 HLGFLNRHPATLVR*VRQCSGHE*RWMLRSPFLRHSCHRXXXXXXXXXXXXXXXXSCGST 1992
HLGFLNRHPATLVR*VRQCSGHE*RWMLRSPFLRHSCHR SCGST
Sbjct: 380 HLGFLNRHPATLVR*VRQCSGHE*RWMLRSPFLRHSCHRFLSATSFSSASAMAFWSCGST 201
Query: 1991 SSPLFNA 1971
SSPLF+A
Sbjct: 200 SSPLFSA 180
Score = 117 bits (251), Expect(2) = 2e-036
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = -3 / -3
Query: 2136 GEVSAAVLRP*VEVDVAQPVSPAFLPQVLVCHKLQQCISDGVLVVWVNEQSVV*CI 1969
GEVSAAVLRP*VEVDVAQPVSPA LPQVL+ HKLQQCISDGVLVVWVNEQS+V C+
Sbjct: 345 GEVSAAVLRP*VEVDVAQPVSPALLPQVLIRHKLQQCISDGVLVVWVNEQSIVQCL 178
Score = 115 bits (245), Expect(4) = 6e-079
Identities = 49/58 (84%), Positives = 51/58 (87%)
Frame = -1 / -1
Query: 2447 SGYLFMVLPVASVAFLAPSATEDMDGGSADDCLMLFMIFCT*SWGSDDSGSLVFSELF 2274
SGYLFMV PV S AFLAPS ED+DGGSADDCL+LFMIFCT*S GSDDSGSLVF ELF
Sbjct: 656 SGYLFMVPPVTSAAFLAPSPPEDIDGGSADDCLILFMIFCT*SCGSDDSGSLVFRELF 483
Score = 72.1 bits (151), Expect(4) = 6e-079
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = -3 / -3
Query: 2280 ALLTVDGQTE*QVLSVHGILQELLLIGSGICWCVLQ 2173
ALLT+DGQTE*QVLSVHGILQELL+I S IC CVLQ
Sbjct: 489 ALLTIDGQTE*QVLSVHGILQELLIISSSICRCVLQ 382
Score = 62.9 bits (131), Expect(2) = 2e-036
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -3 / -3
Query: 2457 PAQEWVFVHGAACGLGCVLGTVCD*GHGRRK 2365
PAQEWV VHGAAC LGC+LGTV GH RRK
Sbjct: 666 PAQEWVLVHGAACDLGCILGTVTARGHRRRK 574
Score = 57.4 bits (119), Expect(2) = e-113
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3 / +2
Query: 1908 GCGTRTPDSRYQEWWSGRHYKCIK 1979
GCGTRT +SRYQEWWS RHY C K
Sbjct: 20 GCGTRTSNSRYQEWWSSRHYNCEK 91
Score = 53.3 bits (110), Expect(2) = 4e-095
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +1 / +3
Query: 1906 EAAAHGLPIVATKNGGPVDITNALNN 1983
+AAAHGLPIVATKNGGPVDIT N+
Sbjct: 18 QAAAHGLPIVATKNGGPVDITTVRNH 95
Score = 51.0 bits (105), Expect(2) = 5e-098
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -1 / -2
Query: 1979 FNAFVMSTGPPFLVATIGSPCAAA 1908
F VMSTGPPFLVATIGSPCAAA
Sbjct: 91 FLTVVMSTGPPFLVATIGSPCAAA 20
Score = 46.4 bits (95), Expect(4) = 6e-079
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -2 / -3
Query: 1969 L*CRPDHHSW*RLSGVRVPQPRS 1901
L*CR DHHSW*RL VRVPQP S
Sbjct: 81 L*CRLDHHSW*RLLEVRVPQPES 13
Score = 36.3 bits (73), Expect(3) = 7e-059
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2 / +2
Query: 2321 IKCXXXXXXXXXXQHFRRPCPQSQTVXXXXXXXXXXXXXNTHSCAG 2458
I+C Q FRR CP++ TV +THSCAG
Sbjct: 530 IRCRRS*TRSSSHQRFRRRCPRAVTVPRMQPRSQAAP*TSTHSCAG 667
Score = 36.3 bits (73), Expect(3) = 7e-059
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +2 / +1
Query: 1916 HTDSR*SLPRMVVRSTLQM 1972
HTD +*SLPRMVV+STLQ+
Sbjct: 28 HTDFQ*SLPRMVVQSTLQL 84
>gb|CX615040.1|CX615040 GABR1_17_F12.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_17_F12_A002 5', mRNA sequence
Length = 775
Score = 310 bits (672), Expect(2) = e-111
Identities = 126/174 (72%), Positives = 149/174 (85%)
Frame = +1 / +3
Query: 1528 PPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDI 1707
PPIW+++MRF TNP KPMILA++RP P+KNITTLVKAFGECRPLRELANLTLIMGNR+ I
Sbjct: 252 PPIWSQIMRFFTNPRKPMILAVARPYPEKNITTLVKAFGECRPLRELANLTLIMGNREAI 431
Query: 1708 DDMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKGVFINPALVEP 1887
M +A+VLT+VL LID+YDLYG VA+PKHH ++VP+IYRLAA+ KG F+N A E
Sbjct: 432 SKMHNMSAAVLTSVLTLIDEYDLYGQVAYPKHHKHSEVPDIYRLAARTKGAFVNVAYFEQ 611
Query: 1888 FGLTLIEAAAHGLPIVATKNGGPVDITNALNNGLLVDPHDQNAIADALLKLVAD 2049
FG+TLIEAA +GLPI+ATKNG PV+I LNNGLLVDPHDQNAIADAL KL++D
Sbjct: 612 FGVTLIEAAMNGLPIIATKNGAPVEINQVLNNGLLVDPHDQNAIADALYKLLSD 773
Score = 196 bits (422), Expect(2) = 1e-063
Identities = 96/159 (60%), Positives = 110/159 (69%)
Frame = -1 / -1
Query: 2003 CGSTSSPLFNAFVMSTGPPFLVATIGSPCAAASIRVRPNGSTRAGLMKTPFILAARR*IS 1824
CGST PLF ++STG PF VA IG P AASIRV PN S A K PF+LAA+R*+S
Sbjct: 727 CGSTRRPLFRT*LISTGAPFFVAIIGKPFIAASIRVTPNCSK*ATFTKAPFVLAAKR*MS 548
Query: 1823 GTSA*L*CLGNATLPYRSYLSISFRTVVRTLALPADMSSMSSLLPMIRVRFASSLSGRHS 1644
GTS L*CLG AT PY+SY SI+ T V+T AL + ++S LP+I VRFASSLSGRHS
Sbjct: 547 GTSECL*CLGYAT*PYKSYSSINVSTDVKTAALILCILDIASRLPIINVRFASSLSGRHS 368
Query: 1643 PNALTRVVMFFFGSGLDNARIIGL*GLVRNRITSAQIGG 1527
PNA T VV+FF G G ARIIG G V+ RI QIGG
Sbjct: 367 PNAFTSVVIFFSG*GRATARIIGFLGFVKKRII*DQIGG 251
Score = 115 bits (246), Expect(2) = e-111
Identities = 42/65 (64%), Positives = 57/65 (87%)
Frame = +1 / +3
Query: 1255 ALDASELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVSCHGRYMPRMVVIPPGMD 1434
+LDASE+VI STRQEI+EQW LYDGF+V L + LRAR +RG +C+GR+MPRMV+IPPG++
Sbjct: 3 SLDASEIVIASTRQEIEEQWNLYDGFEVILARKLRARVKRGANCYGRFMPRMVIIPPGVE 182
Query: 1435 FSNVV 1449
F +++
Sbjct: 183 FGHII 197
Score = 107 bits (228), Expect(2) = 5e-031
Identities = 51/165 (30%), Positives = 96/165 (58%)
Frame = -3 / -3
Query: 2028 CISDGVLVVWVNEQSVV*CICNVDRTTILGSDYRESVCRSLDQGETKRLNESRVDEDALH 1849
CI +G+L+V +N+++++ + N +R +IL +Y +++ L Q +K S + + L
Sbjct: 752 CIRNGILIVRINKETIIQDLINFNRGSILCRNYWQTIHSGLYQSNSKLFEVSYIYKSPLC 573
Query: 1848 FGREAIDLRDVSLIVMLRERHASVQIILVNQLQNCGEDTGIASRHVVDVISVTHDQSKVC 1669
I++R+ +++ML H ++Q+I +NQ ++ +D+ H+ +VTH Q KVC
Sbjct: 572 SCS*TINVRNFRVLMMLGVCHLTIQVIFINQCKH*CQDSSTHIVHLRYSFTVTHYQCKVC 393
Query: 1668 KFPEWTTLSKRFDEGSDVLLRVWS**RQDHRLVRVGQEPHHFGPN 1534
K P W T +K F + S++LL + + +HRL R+ +E H+ PN
Sbjct: 392 KLP*WPTFTKCFYKRSNILLGIRASNS*NHRLPRICKEAHYLRPN 258
Score = 71.6 bits (150), Expect(2) = 1e-063
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = -1 / -1
Query: 1424 GGITTILGM*RPWQLTPRLARALSTFSSLTSNPSYNPHCSSISCLVLVIT 1275
GGI TI G+ RP QL PRL A S +S+TS PSY HCSSISCLVL +T
Sbjct: 172 GGIITIRGIKRP*QLAPRLTLARSFLASITSKPSYKFHCSSISCLVLAMT 23
Score = 51.0 bits (105), Expect(2) = 5e-031
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = -3 / -3
Query: 1467 INVFMNYNIAEIHSRRNHHHPRHVTTMAANPAPRPCPQHFLKLDIKSIVQSPLLINLLPC 1288
I++ + N+ + +SRRN++H RH T + + C + K ++K+I+Q PLL LP
Sbjct: 215 IHIKIVNNVTKFNSRRNYNHTRHKTAITISTTFNSCSELPCKYNLKTIIQVPLLFYFLPS 36
Query: 1287 A 1285
A
Sbjct: 35 A 33
>gb|AW671713.1|AW671713 LG1_351_F01.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 541
Score = 386 bits (838), Expect = e-106
Identities = 163/166 (98%), Positives = 164/166 (98%)
Frame = +1 / +1
Query: 1501 LEGASPKSMPPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLT 1680
LE ASPKSMPPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLT
Sbjct: 43 LEVASPKSMPPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLT 222
Query: 1681 LIMGNRDDIDDMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKGV 1860
LIMGNRDDID+MSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKGV
Sbjct: 223 LIMGNRDDIDEMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKGV 402
Query: 1861 FINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDITNALNNGLLVD 1998
FINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDIT ALNNGLLVD
Sbjct: 403 FINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDITTALNNGLLVD 540
Score = 379 bits (822), Expect = e-103
Identities = 151/179 (84%), Positives = 159/179 (88%)
Frame = +3 / +3
Query: 1461 H*WGW*RQR*YRWFGGCLTQVNAPNLGRSDAVPDQPSQADDPGVIKTRPEEEHHYPRQSV 1640
H*WGW*+QR*YRWFGGCLTQVNA NLG DAVP+QPSQADDP +K RPEEEHHYPRQSV
Sbjct: 3 H*WGW*QQR*YRWFGGCLTQVNASNLG*GDAVPNQPSQADDPRFVKARPEEEHHYPRQSV 182
Query: 1641 WRVSSTQGTCKPYSDHG*QR*HRRHVCWQCQCPHHSSEAD*QV*SVRKRGVP*ASQSG*R 1820
WRV TQGTCKPYSDHG QR*HRR+VCW+CQCPHHSSEAD*QV*SV K G+P*ASQSG*
Sbjct: 183 WRVPPTQGTCKPYSDHGEQR*HRRNVCWECQCPHHSSEAD*QV*SVWKCGLP*ASQSG*C 362
Query: 1821 PGDLSPRGQNEGRLHQPCSR*AVWSHPDRGCGTRTPDSRYQEWWSGRHYKCIKQRTAR* 1997
P DL PRGQNEGRLHQPCSR*AV SHPDRGCGTRT +SRYQEWWS RHY C +Q TAR*
Sbjct: 363 PRDLPPRGQNEGRLHQPCSR*AVRSHPDRGCGTRTSNSRYQEWWSSRHYNCTEQWTAR* 539
Score = 360 bits (781), Expect = 6e-098
Identities = 152/180 (84%), Positives = 159/180 (88%)
Frame = -3 / -2
Query: 1998 VNEQSVV*CICNVDRTTILGSDYRESVCRSLDQGETKRLNESRVDEDALHFGREAIDLRD 1819
VNEQS+V C CNVD TTILGSDY +SVCRSLDQGET+RLNESRVDEDALHFGREA+DL D
Sbjct: 540 VNEQSIVQCSCNVDWTTILGSDYWKSVCRSLDQGETERLNESRVDEDALHFGREAVDLWD 361
Query: 1818 VSLIVMLRERHASVQIILVNQLQNCGEDTGIASRHVVDVISVTHDQSKVCKFPEWTTLSK 1639
+SLIVMLRE H S+QIILVNQLQNCGEDTGI SRH VDVISV HDQSKVCKFPEW LSK
Sbjct: 360 ISLIVMLREGHTSIQIILVNQLQNCGEDTGIPSRHFVDVISVPHDQSKVCKFPEWAALSK 181
Query: 1638 RFDEGSDVLLRVWS**RQDHRLVRVGQEPHHFGPNWGH*LG*GTLQTNDIIFDVTIPINV 1459
RFDEGSDVLLRVW * +DHRLVRVG EPHH PNW H*LG*G LQTNDIIF VTIPINV
Sbjct: 180 RFDEGSDVLLRVWP*QSEDHRLVRVG*EPHHLSPNWRH*LG*GNLQTNDIIFAVTIPINV 1
Score = 357 bits (773), Expect = 8e-097
Identities = 150/180 (83%), Positives = 153/180 (85%)
Frame = -2 / -1
Query: 1999 GQRAVRCLMHL*CRPDHHSW*RLSGVRVPQPRSG*DQTAQREQG**RRPSFWPRGDRSPG 1820
GQRAV C + L*CR DHHSW*RL VRVPQPRSG*D+TAQREQG**RRPSFWPRG RS G
Sbjct: 541 GQRAVHCSVQL*CRLDHHSW*RLLEVRVPQPRSG*DRTAQREQG**RRPSFWPRGGRSLG 362
Query: 1819 RQPDCDA*GTPRFRTDHTCQSASELW*GHWHCQQTCRRCHLCYP*SE*GLQVP*VDDTLQ 1640
QPDCDA*G P F TDHTCQSASELW*GHWH QQT RRCHLC P*SE*GLQVP*V TLQ
Sbjct: 361 HQPDCDA*GRPHFHTDHTCQSASELW*GHWHSQQTFRRCHLCSP*SE*GLQVP*VGGTLQ 182
Query: 1639 TL*RG**CSSSGLVLITPGSSACEGWSGTASLRPKLGALTWVRHPPNQRYHL*RHHPHQC 1460
TL*RG**CSSSGL L GSSACEGW GTAS +PKL ALTWVR PPNQRYHL HHPHQC
Sbjct: 181 TL*RG**CSSSGLALTKRGSSACEGWLGTASPQPKLEALTWVRQPPNQRYHLCCHHPHQC 2
Score = 347 bits (753), Expect = 5e-094
Identities = 156/163 (95%), Positives = 158/163 (96%)
Frame = -1 / -3
Query: 1997 STSSPLFNAFVMSTGPPFLVATIGSPCAAASIRVRPNGSTRAGLMKTPFILAARR*ISGT 1818
STSSPLF+A VMSTGPPFLVATIGSPCAAASIRVRPNGSTRAGLMKTPFILAARR*ISGT
Sbjct: 539 STSSPLFSAVVMSTGPPFLVATIGSPCAAASIRVRPNGSTRAGLMKTPFILAARR*ISGT 360
Query: 1817 SA*L*CLGNATLPYRSYLSISFRTVVRTLALPADMSSMSSLLPMIRVRFASSLSGRHSPN 1638
SA*L*CLG ATLPYRSYLSISFRTVVRTLA PAD+SSMSSL PMIRVRFASSLSGRHSPN
Sbjct: 359 SA*L*CLGKATLPYRSYLSISFRTVVRTLAFPADISSMSSLFPMIRVRFASSLSGRHSPN 180
Query: 1637 ALTRVVMFFFGSGLDNARIIGL*GLVRNRITSAQIGGIDLGEA 1509
ALTRVVMFFFGSGLD ARIIGL*GLVRNRITSAQIGGIDLGEA
Sbjct: 179 ALTRVVMFFFGSGLDKARIIGL*GLVRNRITSAQIGGIDLGEA 51
Score = 290 bits (627), Expect = 1e-076
Identities = 134/180 (74%), Positives = 141/180 (78%)
Frame = +2 / +2
Query: 1460 TLMGMVTSKMISLVWRVPHPSQCPQFGPK*CGS*PTLTSR*SWRYQDQTRRRTSLPSSKR 1639
TLMGMVT+KMISLVWR+PHPSQC QFG +*CGS*PTLTSR*S Q QTRRRTSLPSSKR
Sbjct: 2 TLMGMVTAKMISLVWRLPHPSQCLQFGLR*CGS*PTLTSR*SSLCQGQTRRRTSLPSSKR 181
Query: 1640 LESVVHSGNLQTLL*SWVTEMTSTTCLLAMPVSSPQF*S*LTSMICTEAWRSLSITIRLT 1819
LES HSGNLQTLL*SW TEMTST CLL MPVSSPQF*S*LTSMIC E W SLSITIRL
Sbjct: 182 LESAAHSGNLQTLL*SWGTEMTSTKCLLGMPVSSPQF*S*LTSMICMEVWPSLSITIRLM 361
Query: 1820 SRRSIASRPK*XXXXXXXXXXXXXXXXXXXXXHTDSR*SLPRMVVRSTLQMH*TTDCSLT 1999
S+RS ASRPK* HTD +*SLPRMVV+STLQ+H*T DCSLT
Sbjct: 362 SQRSTASRPK*RASSSTLLSLSRSVSP*SRLRHTDFQ*SLPRMVVQSTLQLH*TMDCSLT 541
>gb|CL704815.2|CL704815 SP__Bb0029E23.r SP__Bb Sorghum propinquum genomic clone SP__Bb0029E23
3', DNA sequence
Length = 500
Score = 385 bits (834), Expect = e-105
Identities = 158/166 (95%), Positives = 161/166 (96%)
Frame = +1 / +3
Query: 2044 ADKNLWQECRRNGLRNIHLYSWPEHCRTYLTRVAGCRLRNPRWLKDTPADAGADEEEFLE 2223
ADKNLWQECRRNGLRNIHLYSWPEHCRTYLTRVAGCRLRNPRWLKDTPADAGAD+EEFLE
Sbjct: 3 ADKNLWQECRRNGLRNIHLYSWPEHCRTYLTRVAGCRLRNPRWLKDTPADAGADDEEFLE 182
Query: 2224 DSMDAQDLSLRLSIDGEKSSLNTNDPLSSDPQDQVQKIMNNIKQSSALPPSMSSVADGAK 2403
DSMDAQDLSLRLSIDGEKSSLNTNDPLSSDPQDQVQKIM+ IKQSSALPPSMSS DGAK
Sbjct: 183 DSMDAQDLSLRLSIDGEKSSLNTNDPLSSDPQDQVQKIMSKIKQSSALPPSMSSGGDGAK 362
Query: 2404 NATEATGSTMNKYPLLRRRRRLFVIAVDCYQDDGRASKKMLQVIQE 2541
NA EATG TMNKYPLLRRRRRLFVIAVDCY+DDGRASKKMLQVIQE
Sbjct: 363 NAAEATGGTMNKYPLLRRRRRLFVIAVDCYEDDGRASKKMLQVIQE 500
Score = 348 bits (754), Expect = 3e-094
Identities = 141/165 (85%), Positives = 144/165 (87%)
Frame = -2 / -3
Query: 2536 GSPAASSC*HGHRPGSSPQL*RTSAGAGAGVGICSWCCLWPRLRSWHRLRLRTWTAEVLT 2357
GSPAASSC*HGHR SSPQL*RT AGAGAGVG CSWC LWPRL SWHRLR RT TAE L
Sbjct: 495 GSPAASSC*HGHRLRSSPQL*RTGAGAGAGVGTCSWCRLWPRLHSWHRLRPRTSTAEALM 316
Query: 2356 TA*CCS*SSALDPGGRTTVGRWCSASSSHRRWTDGVTGPERPWNPPGTPPHRLRHLLVCP 2177
TA* CS*SSA DP G TTVGR CS SSSH RWTDGVTGPERPWNPPGTP H+L+HL VCP
Sbjct: 315 TA*SCS*SSAPDPAGPTTVGR*CSGSSSHHRWTDGVTGPERPWNPPGTPHHQLQHLPVCP 136
Query: 2176 SATSGSLTGTRPPW*GKCGSAPAMSRGGCCAARFSGIPATGSCLP 2042
SATSGS TGT+PPW*GKCGSAPAMSRGGCCAARFSG PATGSCLP
Sbjct: 135 SATSGSSTGTQPPW*GKCGSAPAMSRGGCCAARFSGTPATGSCLP 1
Score = 339 bits (734), Expect = 2e-091
Identities = 140/165 (84%), Positives = 146/165 (88%)
Frame = +3 / +2
Query: 2043 GRQEPVAGMPEKRAAQHPPLLMAGALPHLPHQGGRVPVKEPEVAEGHTSRCRSR*GGVPG 2222
GRQEPVAG+PEKRAAQHPPLLMAGALPHLPHQGG VPV+EPEVAEGHT RC S * GVPG
Sbjct: 2 GRQEPVAGVPEKRAAQHPPLLMAGALPHLPHQGGWVPVEEPEVAEGHTGRCWS***GVPG 181
Query: 2223 GFHGRSGPVTPSVHRR*EELAEHQRPTVVRPPGSSAEDHEQHQAVVSTSAVHVLSRRRCQ 2402
GFHGRSGPVTPSVHR *EEL EH RPTVV P GS AEDHEQ QAV+S SAV VL RRRCQ
Sbjct: 182 GFHGRSGPVTPSVHRW*EELPEH*RPTVVGPAGSGAEDHEQDQAVISASAVDVLGRRRCQ 361
Query: 2403 ERNRGHRQHHEQIPTPAPAPALVRHSCGLLPGRWPC*QEDAAGDP 2537
E +RGHR+HHEQ+PTPAPAPA VRHSCGLL RWPC*QEDAAGDP
Sbjct: 362 ECSRGHRRHHEQVPTPAPAPAPVRHSCGLLRRRWPC*QEDAAGDP 496
Score = 163 bits (350), Expect(3) = 2e-078
Identities = 73/89 (82%), Positives = 76/89 (85%)
Frame = -1 / -2
Query: 2540 SWITCSIFLLARPSSW*QSTAMTNKXXXXXRSGYLFMVLPVASVAFLAPSATEDMDGGSA 2361
SWITCSIFLLARPSS *QSTAMTN+ RSGYLFMV PVAS AFLAPS ED+DGGSA
Sbjct: 499 SWITCSIFLLARPSSS*QSTAMTNRRRRRRRSGYLFMVPPVASAAFLAPSPPEDIDGGSA 320
Query: 2360 DDCLMLFMIFCT*SWGSDDSGSLVFSELF 2274
DDCL+L MIFCT*S GSDDSGSLVF ELF
Sbjct: 319 DDCLILLMIFCT*SCGSDDSGSLVFRELF 233
Score = 149 bits (320), Expect(3) = 8e-055
Identities = 60/77 (77%), Positives = 62/77 (80%)
Frame = +2 / +1
Query: 2042 WQTRTCGRNAGETGCATSTSTHGRSTAALTSPGWPGAXXXXXXXXXXHQQMPEPMRRSSW 2221
WQTRTCGR+AGETGCATSTSTHGRSTAALTSPGW GA H+QM E M RSSW
Sbjct: 1 WQTRTCGRSAGETGCATSTSTHGRSTAALTSPGWLGAG*GTRGG*RTHRQMLELMMRSSW 180
Query: 2222 RIPWTLRTCHSVCPSTV 2272
RIPWTLRTCHSVCPS V
Sbjct: 181 RIPWTLRTCHSVCPSMV 231
Score = 128 bits (274), Expect(2) = 3e-041
Identities = 52/59 (88%), Positives = 53/59 (89%)
Frame = -3 / -1
Query: 2541 FLDHLQHLLASTAIVLVAVHSYDEQAPAPAQEWVFVHGAACGLGCVLGTVCD*GHGRRK 2365
FLDHLQHLLASTAIV VAVHSYDEQAPAPAQEWV VHGAACGLGC+LGTV GH RRK
Sbjct: 500 FLDHLQHLLASTAIVFVAVHSYDEQAPAPAQEWVLVHGAACGLGCILGTVSARGHRRRK 324
Score = 100 bits (214), Expect(3) = 2e-078
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1 / -2
Query: 2171 HLGFLNRHPATLVR*VRQCSGHE*RWMLRSPFLRHSCHR 2055
HLGFLNRHPATLVR*VRQCSGHE*RWMLRSPFLRHSCHR
Sbjct: 130 HLGFLNRHPATLVR*VRQCSGHE*RWMLRSPFLRHSCHR 14
Score = 79.0 bits (166), Expect(3) = 8e-055
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +2 / +1
Query: 2438 NTHSCAGAGACSS*LWTATRTMAVLARRCCR*SR 2539
+THSCAGAGACSS*LWTAT+TMAVLARRCCR*S+
Sbjct: 397 STHSCAGAGACSS*LWTATKTMAVLARRCCR*SK 498
Score = 72.1 bits (151), Expect(3) = 2e-078
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = -3 / -1
Query: 2280 ALLTVDGQTE*QVLSVHGILQELLLIGSGICWCVLQ 2173
ALLT+DGQTE*QVLSVHGILQELL+I S IC CVLQ
Sbjct: 239 ALLTIDGQTE*QVLSVHGILQELLIISSSICRCVLQ 132
Score = 68.4 bits (143), Expect(2) = 3e-041
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -3 / -1
Query: 2136 GEVSAAVLRP*VEVDVAQPVSPAFLPQVLVC 2044
GEVSAAVLRP*VEVDVAQPVSPA LPQVLVC
Sbjct: 95 GEVSAAVLRP*VEVDVAQPVSPALLPQVLVC 3
Score = 28.1 bits (55), Expect(3) = 8e-055
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / +1
Query: 2321 IKCXXXXXXXXXXQHFRRPCPQSQTV 2398
I+C Q FRR CP+++TV
Sbjct: 280 IRCRRS*ARSSSHQRFRRRCPRAETV 357
>gb|CW202854.1|CW202854 104_629_11185318_116_36915_091 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11185318, DNA
sequence
Length = 635
Score = 235 bits (508), Expect(3) = e-104
Identities = 96/98 (97%), Positives = 97/98 (98%)
Frame = +1 / -2
Query: 880 GESGGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNGRPVLPY 1059
GES GAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNG+PVLPY
Sbjct: 295 GESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNGKPVLPY 116
Query: 1060 VIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQ 1173
VIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQ
Sbjct: 115 VIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQ 2
Score = 234 bits (506), Expect(3) = 8e-098
Identities = 85/97 (87%), Positives = 87/97 (89%)
Frame = +3 / -1
Query: 879 G*EWRSLHCAHTVWAAG*IPQEGSVVALPPRVCRWSPCAYPEHVQGSGRAGWKWEASTAL 1058
G E RSLHCAHTVWA *IPQEGS VALPPR+CRWS CAYPEHVQGSGRAGWKWEASTAL
Sbjct: 296 GRECRSLHCAHTVWATR*IPQEGSAVALPPRICRWSSCAYPEHVQGSGRAGWKWEASTAL 117
Query: 1059 RDTWALCRCWRCCCSPFWCAECANGAHWPLTWEEQAG 1169
RDTW LCRCWRCCCSP CAECA+GAHW LTWEEQAG
Sbjct: 116 RDTWTLCRCWRCCCSPLRCAECAHGAHWSLTWEEQAG 6
Score = 215 bits (465), Expect(3) = 1e-093
Identities = 88/103 (85%), Positives = 90/103 (87%)
Frame = -2 / +1
Query: 1174 VVPACSSQVSGQ*APLAHSAHQKGEQQHLQHRHSAHVSRKAVLASHFQPALPEPWTCSGY 995
V PACSSQVS Q*AP AHSAH++GEQQHLQHRHS HVSRKAVLASHFQPALPEPWTCSGY
Sbjct: 1 VAPACSSQVSDQ*APWAHSAHRRGEQQHLQHRHSVHVSRKAVLASHFQPALPEPWTCSGY 180
Query: 994 AQGLHRQTLGGKATTLPS*GIYPAAHTVCAQCRLRHSHPSPLH 866
AQ LHRQ LGGKAT LPS*GIY AHTVCAQCRLRHS P H
Sbjct: 181 AQELHRQILGGKATALPS*GIYRVAHTVCAQCRLRHSRPPLHH 309
Score = 204 bits (441), Expect(2) = 1e-081
Identities = 85/97 (87%), Positives = 87/97 (89%)
Frame = +2 / -3
Query: 884 RVAEPTLCAYRVGRGINTSRRKRCGLTSKSLSMEPLRIS*TCPRLWESRLEMGGQYCLT* 1063
RV EPTLCAYRVG INTSRRKRCGLTSK+LSME LRIS*TCPRLWESRLEMG QYCLT*
Sbjct: 291 RVPEPTLCAYRVGHAINTSRRKRCGLTSKNLSMELLRIS*TCPRLWESRLEMGSQYCLT* 112
Query: 1064 YMGTMPMLEMLLLSFLVR*MCQWCSLATHLGGTSWNN 1174
YM TMPMLEMLLLS VR*MC WCSL THLGGTSW+N
Sbjct: 111 YMDTMPMLEMLLLSSPVR*MCPWCSLVTHLGGTSWSN 1
Score = 183 bits (394), Expect(3) = 4e-077
Identities = 79/90 (87%), Positives = 80/90 (88%)
Frame = -3 / +2
Query: 1152 K*VASEHHWHIQRTRKESSNISSIGIVPMYHVRQYWPPISNLLSQSLGHVQDMRKGSIDK 973
K*V SEHH HIQRT +ESSNISSIGIV MYHVRQYW PISNLLSQSLGHVQDMRK SIDK
Sbjct: 23 K*VTSEHHGHIQRTGEESSNISSIGIVSMYHVRQYWLPISNLLSQSLGHVQDMRKSSIDK 202
Query: 972 LLEVRPQRFLLEVFIPRPTRYAHNVGSATL 883
LEVRPQRFLLEVFI PTRYAHNVGS TL
Sbjct: 203 FLEVRPQRFLLEVFIAWPTRYAHNVGSGTL 292
Score = 135 bits (290), Expect(4) = 2e-053
Identities = 55/57 (96%), Positives = 56/57 (98%)
Frame = -1 / +3
Query: 1064 IT*GSTGLPFPTCSPRALDMFRICARAPSTNSWR*GHNASFLRYLSRGPHGMRTM*A 894
IT*GSTG PFPTCSPRALDMFRICARAPSTNSWR*GH+ASFLRYLSRGPHGMRTM*A
Sbjct: 111 IT*GSTGFPFPTCSPRALDMFRICARAPSTNSWR*GHSASFLRYLSRGPHGMRTM*A 281
Score = 126 bits (269), Expect(3) = e-104
Identities = 52/58 (89%), Positives = 54/58 (93%)
Frame = +1 / -2
Query: 718 QVKYVVELARAMSMMPGVYRVDLFTRQVSSLDVDWSYGEPTEMLCAGSNDGEGMGESG 891
QVKYVVELARAMSMMPGVYRVDLFTRQVSS DVDWSYGEPTEMLC+GSNDGEG +G
Sbjct: 454 QVKYVVELARAMSMMPGVYRVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGGESAG 281
Score = 122 bits (261), Expect(2) = 1e-081
Identities = 49/61 (80%), Positives = 53/61 (86%)
Frame = +2 / -3
Query: 695 VVILIQVAR*NMWSNLQERCQ*CLECTGWTSSLVKCHLLTWTGATVSQPRCYAPVPMMER 874
V ++ + R*NM SNLQ +CQ*CLECTGWTSSLVKCHLLTWTGA VSQ RCYAPVPMMER
Sbjct: 477 VRLIFESHR*NMLSNLQGQCQ*CLECTGWTSSLVKCHLLTWTGAMVSQRRCYAPVPMMER 298
Query: 875 G 877
G
Sbjct: 297 G 295
Score = 110 bits (235), Expect(3) = 1e-093
Identities = 46/52 (88%), Positives = 46/52 (88%)
Frame = -2 / +1
Query: 874 PLHHWNRRITSRLAHRSSSPRQEMTLDE*RGPPCTLQASLTSLLQVRPHISP 719
PLHHWNR ITS LAH SSSPRQEMTLDE*RGPPCTLQASLT LQVR HISP
Sbjct: 298 PLHHWNRSITSPLAHHSSSPRQEMTLDE*RGPPCTLQASLTLPLQVRQHISP 453
Score = 107 bits (228), Expect(3) = 8e-098
Identities = 46/52 (88%), Positives = 47/52 (90%)
Frame = +3 / -1
Query: 720 GEICGRTCKSDVNDAWSVQGGPLHSSSVIS*RGLELR*ANRDVMRRFQ*WRG 875
GEIC RTCK +VNDAWSVQGGPLHSSSVIS*RGLEL *AN DVM RFQ*WRG
Sbjct: 452 GEICCRTCKGNVNDAWSVQGGPLHSSSVIS*RGLELW*ANGDVMLRFQ*WRG 297
Score = 96.8 bits (205), Expect(3) = 4e-077
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = -1 / +3
Query: 851 HNISVGSP*LQSTSRDDT*RVKRSTLYTPGIIDIALASSTTYFT 720
HNISVGSP*LQSTS DDT*RVKRSTLYTPGIIDIALASSTTYFT
Sbjct: 321 HNISVGSP*LQSTSGDDT*RVKRSTLYTPGIIDIALASSTTYFT 452
Score = 62.5 bits (130), Expect(4) = 2e-053
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -3 / +2
Query: 876 PLSIIGTGA*HLGWLTVAPVHVKR*HLT 793
PLSIIGTGA*HL WLT+APVHV+R*HLT
Sbjct: 296 PLSIIGTGA*HLRWLTIAPVHVRR*HLT 379
Score = 60.6 bits (126), Expect(3) = 1e-093
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = -1 / +2
Query: 725 FTWPPVSESRPSSMFSPRTRPC 660
FTWPPVSESRPSSMFSPRTRPC
Sbjct: 533 FTWPPVSESRPSSMFSPRTRPC 598
Score = 60.2 bits (125), Expect(3) = e-104
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +3 / -2
Query: 645 CAHQRAWSCSWRKHGTRS*F*YRWPGE 725
C Q AWSCSWRKHGTRS*F*+RWPG+
Sbjct: 613 C*VQCAWSCSWRKHGTRS*F*HRWPGK 533
Score = 58.8 bits (122), Expect(3) = 8e-098
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +1 / -3
Query: 655 SVHGLVRGENMELGRDSDTGGQVKYVV 735
SVHGLVRGENMELGRDSDTGGQV ++
Sbjct: 603 SVHGLVRGENMELGRDSDTGGQVNILI 523
Score = 51.5 bits (106), Expect(3) = 4e-077
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2 / +3
Query: 721 PGHLYQNHDLVPCFLHEQDHA 659
PGH QNHDLVPCF HEQDHA
Sbjct: 537 PGHRCQNHDLVPCFRHEQDHA 599
Score = 46.0 bits (94), Expect(4) = 2e-053
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = -3 / +1
Query: 723 HLATCIRITT*FHVFSTNKTMH 658
+LAT +RITT*FHVF+TNKTMH
Sbjct: 535 YLATGVRITT*FHVFATNKTMH 600
Score = 25.4 bits (49), Expect(4) = 2e-053
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / +2
Query: 744 CKFDHIFHL 718
CKFD+IFHL
Sbjct: 428 CKFDNIFHL 454
>gb|CW349038.1|CW349038 fsbb001f009l06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f009l06, DNA
sequence
Length = 741
Score = 222 bits (479), Expect(3) = e-101
Identities = 89/99 (89%), Positives = 94/99 (94%)
Frame = +1 / +1
Query: 2629 QLLQLGKIPATDFDALICGSGSEVYYPGTANCMDAEGKLRPDQDYLMHISHRWSHDGARQ 2808
QLL+LGKIPATDFDALICGSGSEVYYPGT NC+DAEGKLRPDQDYLMHISHRWSHDGARQ
Sbjct: 1 QLLKLGKIPATDFDALICGSGSEVYYPGTVNCIDAEGKLRPDQDYLMHISHRWSHDGARQ 180
Query: 2809 TIAKLMGAQDGSGDAVEQDVASSNAHCVAFLIKDPQKVK 2925
TIAKLM +QDGS DAVE DVASSNAHC AFLIKDP+KV+
Sbjct: 181 TIAKLMASQDGSDDAVELDVASSNAHCFAFLIKDPKKVR 297
Score = 195 bits (421), Expect(3) = 7e-090
Identities = 82/98 (83%), Positives = 88/98 (89%)
Frame = -3 / -1
Query: 2922 HLLGVFDEERDTVCITGRHVLLDSVA*TVLSAHELRYGLPRAVMGPAVADVHQIVLIWAQ 2743
+L G+FDEER+ VCI GRHV LDS+ *TVL+ HEL YGLPRAVMGPAVADVHQIVL+WAQ
Sbjct: 294 NLFGIFDEEREAVCIAGRHVQLDSIV*TVLTGHELCYGLPRAVMGPAVADVHQIVLVWAQ 115
Query: 2742 LSFSVHAVRRARIVHLAAAATDEGVEVGRWDLAELQKL 2629
LSFSV AV RARIVHLAA ATDEGVEVGRWDLAELQKL
Sbjct: 114 LSFSVDAVHRARIVHLAATATDEGVEVGRWDLAELQKL 1
Score = 172 bits (371), Expect(3) = 1e-071
Identities = 78/97 (80%), Positives = 78/97 (80%)
Frame = -1 / -2
Query: 2921 TFWGSLMRNATQCALLDATSCSTASPEPS*APMSFAMVCLAPSWDQRWLMCIRXXXXXXX 2742
TF GSLMRNA QCALLDATS STAS EPS* MSFAMVCLAPSWDQRWLMCIR
Sbjct: 293 TFLGSLMRNAKQCALLDATSSSTASSEPS*LAMSFAMVCLAPSWDQRWLMCIR*SWSGRS 114
Query: 2741 XXXXSMQFAVPG*YTSLPLPQMRASKSVAGILPSCRS 2631
SMQF VPG*YTSLPLPQMRASKSVAGILPS RS
Sbjct: 113 FPSASMQFTVPG*YTSLPLPQMRASKSVAGILPSFRS 3
Score = 170 bits (365), Expect(3) = 2e-076
Identities = 73/97 (75%), Positives = 74/97 (76%)
Frame = +3 / +3
Query: 2631 ASAARQDPSDRLRRPHLWQRQRGVLSWHGELHGR*RKAAPRSGLSDAHQPPLVP*RREAD 2810
AS ARQDPSDRLRRPHLWQ QRGVLSWHGELH R*RKAAPR GLSDAHQPPLVP*RREAD
Sbjct: 3 ASEARQDPSDRLRRPHLWQWQRGVLSWHGELHRR*RKAAPRPGLSDAHQPPLVP*RREAD 182
Query: 2811 HSEAHXXXXXXXXXXXXXXXVQ*CTLCRVPHQRPPKG 2921
HS+AH VQ CTL RVPHQR KG
Sbjct: 183 HSKAHGQSGRFRRCCRAGRGVQQCTLLRVPHQRSQKG 293
Score = 160 bits (344), Expect(3) = 8e-070
Identities = 71/86 (82%), Positives = 73/86 (84%)
Frame = +2 / +2
Query: 2630 SFCSSARSQRPTSTPSSVXXXXRCTILARRTAWTLKESCAQIRTI*CTSATAGPMTARGR 2809
SF SSARSQRPTSTPSSV RCTILAR TA TLKESCAQ RTI*CTSATAGPMTARGR
Sbjct: 2 SF*SSARSQRPTSTPSSVAVAARCTILAR*TASTLKESCAQTRTI*CTSATAGPMTARGR 181
Query: 2810 P*RSSWALRTVQATLSSRTWRPVMHT 2887
P*+SSW +RTVQ LSS TWRP MHT
Sbjct: 182 P*QSSWPVRTVQTMLSSWTWRPAMHT 259
Score = 150 bits (322), Expect(3) = 6e-042
Identities = 63/71 (88%), Positives = 64/71 (90%)
Frame = -2 / -3
Query: 2908 L**GTRHSVHYWTPRPARQRRLNRPERP*ASLWSASRRHGTSGG*CASDSPDLGAAFLQR 2729
L**GTR SVH WTPRPARQ RLNRP+ P*A LWSASRRHGTSGG*CASDSP LGAAFLQR
Sbjct: 280 L**GTRSSVHCWTPRPARQHRLNRPDWP*ALLWSASRRHGTSGG*CASDSPGLGAAFLQR 101
Query: 2728 PCSSPCQDSTP 2696
CSSPCQDSTP
Sbjct: 100 RCSSPCQDSTP 68
Score = 101 bits (215), Expect(3) = 7e-090
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = -3 / -3
Query: 3051 IPECL*P*C*QRDNLKPCRVPAVHDVAAETTHPQPLPHLIDRFHLL 2914
+PECL*P*C*Q DNLK CRVPAVHDVA ETTHPQPL HLIDRFHL+
Sbjct: 511 LPECL*P*C*QGDNLKSCRVPAVHDVAPETTHPQPLSHLIDRFHLI 374
Score = 94.5 bits (200), Expect(3) = e-101
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +1 / +3
Query: 3046 RYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVR 3165
RYL VRWG+SVGNMYLITGEHGDTDLEEMLSGLHKTVIVR
Sbjct: 621 RYLFVRWGLSVGNMYLITGEHGDTDLEEMLSGLHKTVIVR 740
Score = 94.5 bits (200), Expect(3) = e-101
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = +3 / +1
Query: 2919 GENGR*DEGAAEDAWSPLPHHVLQELDKASGCPSASIKVTGTQV 3050
GENGR*DE AEDAWSP+PHHVLQE DK SGCP ASIKVTGTQV
Sbjct: 379 GENGR*DEREAEDAWSPVPHHVLQERDKTSGCPPASIKVTGTQV 510
Score = 80.3 bits (169), Expect(3) = 2e-076
Identities = 34/39 (87%), Positives = 34/39 (87%)
Frame = +2 / +3
Query: 2933 MR*GSG*GCVVSAATSCTAGTRQGFRLSLC*HQGHRHSG 3049
MR* G*GCVVS ATSCTAGTRQ FRLS C*HQGHRHSG
Sbjct: 393 MR*ERG*GCVVSGATSCTAGTRQDFRLSPC*HQGHRHSG 509
Score = 79.0 bits (166), Expect(3) = 2e-076
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +3 / +2
Query: 3045 QVSFRALGRICGEHVSDHRGTWRHRSRGDAIRATQDRDRP 3164
QV FRALG ICGEHVSDH GTWR+RSRGDAI TQD RP
Sbjct: 620 QVPFRALGPICGEHVSDHWGTWRYRSRGDAIWVTQDCHRP 739
Score = 78.0 bits (164), Expect(3) = 8e-070
Identities = 33/40 (82%), Positives = 33/40 (82%)
Frame = +2 / +1
Query: 3044 SGIFPCAGAYLWGTCI*SPGNMATPI*RRCYPGYTRP*SS 3163
SG F CAGAYLWGTCI*S GNMA PI*RRCY GYTR SS
Sbjct: 619 SGTFSCAGAYLWGTCI*SLGNMAIPI*RRCYLGYTRLSSS 738
Score = 77.1 bits (162), Expect(3) = 7e-090
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = -3 / -2
Query: 3162 DDHGLV*PG*HLL*IGVAMFPGDQIHVPHRYAPAHGKIPE 3043
DD LV*P *HLL*IG+AMFP DQIHVPHR APAH K+PE
Sbjct: 737 DDDSLV*PR*HLL*IGIAMFPSDQIHVPHR*APAHEKVPE 618
Score = 74.4 bits (156), Expect(3) = 1e-071
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -2 / -1
Query: 3163 GRSRSCVARIASPLDRCRHVPR*SDTCSPQIRPSARKDT* 3044
GR +SCV +IASPLDR RHVP+*SDTCSPQI PSARK T*
Sbjct: 738 GR*QSCVTQIASPLDRYRHVPQ*SDTCSPQIGPSARKGT* 619
Score = 68.4 bits (143), Expect(3) = 8e-070
Identities = 30/43 (69%), Positives = 31/43 (72%)
Frame = +1 / +2
Query: 2920 VKTVDXXXXXXXXXXXXCHIMYCRNSTRLQVVPLLASRSQALR 3048
VKTVD CHIMYCRN+TRLQVVPLLASRSQALR
Sbjct: 380 VKTVDEMRERLRMRGLRCHIMYCRNATRLQVVPLLASRSQALR 508
Score = 66.1 bits (138), Expect(3) = 1e-071
Identities = 30/44 (68%), Positives = 30/44 (68%)
Frame = -1 / -1
Query: 3050 YLSACDLDASRGTT*SLVEFLQYMMWQXXXXXXXXXXXXSTVFT 2919
YLSACDLDASRGTT*SLV FLQYMMW STVFT
Sbjct: 510 YLSACDLDASRGTT*SLVAFLQYMMWHRRPRILSLSLISSTVFT 379
Score = 36.8 bits (74), Expect(3) = 6e-042
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / -3
Query: 3089 YMFPTDTPQRTERYL 3045
YMFPTD PQRT+RYL
Sbjct: 664 YMFPTDRPQRTKRYL 620
Score = 34.1 bits (68), Expect(3) = 6e-042
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2 / -2
Query: 3049 T*VPVTLMLAEGQPEAL 2999
T*VPVTLMLA GQPE L
Sbjct: 509 T*VPVTLMLAGGQPEVL 459
>gb|CD212848.1|CD212848 HS1_16_B05.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_16_B05_A012 5', mRNA sequence
Length = 632
Score = 360 bits (781), Expect = 6e-098
Identities = 147/201 (73%), Positives = 171/201 (85%)
Frame = +1 / +1
Query: 1504 EGASPKSMPPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTL 1683
E S PPIWA++MRF +NP KPMILAL+RPDPKKNITTLVKAFGE R LR LANLTL
Sbjct: 28 EDGSGSPDPPIWADIMRFFSNPRKPMILALARPDPKKNITTLVKAFGEHRELRNLANLTL 207
Query: 1684 IMGNRDDIDDMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKGVF 1863
IMGNRD ID+MS+ NA+VLT+VLKLIDKYDLYG VA+PKHH +VP+IYRLAA+ KGVF
Sbjct: 208 IMGNRDVIDEMSSTNAAVLTSVLKLIDKYDLYGQVAYPKHHKHVEVPDIYRLAARTKGVF 387
Query: 1864 INPALVEPFGLTLIEAAAHGLPIVATKNGGPVDITNALNNGLLVDPHDQNAIADALLKLV 2043
IN A +EPFGLTLIEAAA+GLP+VAT+NGGPVDI L+NG+LVDPH+QN I +AL KLV
Sbjct: 388 INCAFIEPFGLTLIEAAAYGLPMVATRNGGPVDIHRVLDNGILVDPHNQNEIGEALYKLV 567
Query: 2044 ADKNLWQECRRNGLRNIHLYS 2106
+DK LW CR+NGL+NIH +S
Sbjct: 568 SDKQLWTRCRQNGLKNIHQFS 630
Score = 226 bits (489), Expect = 1e-057
Identities = 107/158 (67%), Positives = 119/158 (75%)
Frame = -1 / -1
Query: 2000 GSTSSPLFNAFVMSTGPPFLVATIGSPCAAASIRVRPNGSTRAGLMKTPFILAARR*ISG 1821
GST PL MSTGPPF VAT+G P AAASI+V PNGS A L+KTPF+LAA+R*ISG
Sbjct: 524 GSTRIPLSRTRCMSTGPPFRVATMGRP*AAASIKVSPNGSMNAQLIKTPFVLAAKR*ISG 345
Query: 1820 TSA*L*CLGNATLPYRSYLSISFRTVVRTLALPADMSSMSSLLPMIRVRFASSLSGRHSP 1641
TS L CLG AT PYRSYLSI+ T V+T A D+SSM+S LPMI VRFA LS R SP
Sbjct: 344 TSTCLWCLGYATCPYRSYLSINLSTEVKTAAFVLDISSMTSRLPMISVRFAKFLSSRCSP 165
Query: 1640 NALTRVVMFFFGSGLDNARIIGL*GLVRNRITSAQIGG 1527
NALTRVV+FFFGSG ARI+GL G +NRI SAQIGG
Sbjct: 164 NALTRVVIFFFGSGRARARIMGLRGFEKNRIISAQIGG 51
Score = 138 bits (295), Expect = 7e-031
Identities = 64/188 (34%), Positives = 115/188 (61%)
Frame = -3 / -3
Query: 2097 VDVAQPVSPAFLPQVLVCHKLQQCISDGVLVVWVNEQSVV*CICNVDRTTILGSDYRESV 1918
+DV Q + PQ+L+ HKL +C++ +L+V VN+ S++ V R TI G ++ ++
Sbjct: 621 MDVFQTILATSCPQLLI*HKLIKCLTYFILIVGVNKNSIIKNPMYVHRPTISGGNHG*TI 442
Query: 1917 CRSLDQGETKRLNESRVDEDALHFGREAIDLRDVSLIVMLRERHASVQIILVNQLQNCGE 1738
SL+QGE+K NE +D+++ I++R+ +++V+L H S+ I+ +N L+ +
Sbjct: 441 SSSLNQGESKWFNECTIDKNSFCSCS*TINIRNFNMLVVLGVCHLSI*IVFIN*LEY*SQ 262
Query: 1737 DTGIASRHVVDVISVTHDQSKVCKFPEWTTLSKRFDEGSDVLLRVWS**RQDHRLVRVGQ 1558
++ I + H ++ I++ HDQ K+C ++T +K FD SD+LLRV + ++H L V +
Sbjct: 261 NSCICA*HFINDITIAHDQCKIC*ISQFTMFTKCFD*SSDILLRVRTSKSKNHGLTGV*E 82
Query: 1557 EPHHFGPN 1534
EPH+ PN
Sbjct: 81 EPHYISPN 58
>gb|BZ366846.1|BZ366846 ic99f12.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic99f12 5', DNA sequence
Length = 671
Score = 302 bits (654), Expect(3) = 4e-097
Identities = 127/131 (96%), Positives = 130/131 (99%)
Frame = +1 / -2
Query: 1024 EQVGNGRPVLPYVIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSKE 1203
EQVGNG+PVLPYVIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSK
Sbjct: 670 EQVGNGKPVLPYVIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSKA 491
Query: 1204 EIDSTYKIMRRIEGEELALDASELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVS 1383
EIDSTYKIMRRIEGEEL+LDASELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVS
Sbjct: 490 EIDSTYKIMRRIEGEELSLDASELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVS 311
Query: 1384 CHGRYMPRMVV 1416
CHGR+MPRMVV
Sbjct: 310 CHGRFMPRMVV 278
Score = 285 bits (617), Expect(3) = 4e-091
Identities = 112/134 (83%), Positives = 117/134 (87%)
Frame = +3 / -1
Query: 1023 RAGWKWEASTALRDTWALCRCWRCCCSPFWCAECANGAHWPLTWEEQAGTTAEARAHVQG 1202
RAGWKWEASTALRDTW LCRCWRCCCSP CAECA+GAHW LTWEEQAG TAEARAHV
Sbjct: 671 RAGWKWEASTALRDTWTLCRCWRCCCSPLRCAECAHGAHWSLTWEEQAGATAEARAHV*S 492
Query: 1203 GDRFDIQDHEAYRG*GAGPGCVRACNHEHKAGD**AVGIVRWI*CQA*ESAEGTGEARG* 1382
GDRF++QDHEAYRG*GA PGCVRAC+HEHKAGD** VGI+RWI* QA*ES E GEA G*
Sbjct: 491 GDRFNLQDHEAYRG*GAVPGCVRACHHEHKAGD**TVGIIRWI*RQA*ESVESPGEAWG* 312
Query: 1383 LPWSLHA*DGGDSS 1424
LPWS HA*DGG S
Sbjct: 311 LPWSFHA*DGGKYS 270
Score = 256 bits (554), Expect(2) = 3e-067
Identities = 111/137 (81%), Positives = 117/137 (85%)
Frame = +2 / -3
Query: 1025 SRLEMGGQYCLT*YMGTMPMLEMLLLSFLVR*MCQWCSLATHLGGTSWNNC*SKGACPRR 1204
SRLEMG QYCLT*YM TMPMLEMLLLS VR*MC WCSL THLGGTSW+NC*SKGAC +R
Sbjct: 669 SRLEMGSQYCLT*YMDTMPMLEMLLLSSPVR*MCPWCSLVTHLGGTSWSNC*SKGACLKR 490
Query: 1205 RSIRHTRS*GVSRVRSWPWMRQSL*SRAQGRRLMSSGDCTMDLMSSLRKC*GHGRGAGLA 1384
R I+ TRS*GVSRVRS PWMRQSL SRAQGRRLM+SGD TMDL SSLRKC* GRG GLA
Sbjct: 489 R*IQPTRS*GVSRVRSCPWMRQSLSSRAQGRRLMNSGDYTMDLTSSLRKC*EPGRGVGLA 310
Query: 1385 AMVVTCLGWW*FLREWI 1435
AMVV+CLGWW* R +
Sbjct: 309 AMVVSCLGWW*VFRSLV 259
Score = 238 bits (514), Expect(3) = 1e-073
Identities = 104/124 (83%), Positives = 106/124 (85%)
Frame = -2 / +1
Query: 1396 NDHGS*PRASPVPSALSQA*HQIHRTIPTAHQSPALCS*LQALTHPGPAPHPRYAS*SCM 1217
NDHGS*P ASP S LSQA* QIHR IPT HQSPALCS* QALTHPG APHPRYAS*SC
Sbjct: 298 NDHGS*PHASPGLSTLSQA*RQIHRIIPTVHQSPALCS**QALTHPGTAPHPRYAS*SCR 477
Query: 1216 SNRSPPWTCALASAVVPACSSQVSGQ*APLAHSAHQKGEQQHLQHRHSAHVSRKAVLASH 1037
N SP TCALASAV PACSSQVS Q*AP AHSAH++GEQQHLQHRHS HVSRKAVLASH
Sbjct: 478 LNLSPL*TCALASAVAPACSSQVSDQ*APWAHSAHRRGEQQHLQHRHSVHVSRKAVLASH 657
Query: 1036 FQPA 1025
FQPA
Sbjct: 658 FQPA 669
Score = 148 bits (317), Expect(2) = 3e-038
Identities = 69/100 (69%), Positives = 74/100 (74%)
Frame = -1 / +3
Query: 1418 ITTILGM*RPWQLTPRLARALSTFSSLTSNPSYNPHCSSISCLVLVITXXXXXXXXXXXS 1239
+TTILGM RPWQLTPRLARAL+TFSSLTSNPSYNPHCSSISCLVLV+T S
Sbjct: 276 LTTILGMKRPWQLTPRLARALNTFSSLTSNPSYNPHCSSISCLVLVMTSSDASRDSSSPS 455
Query: 1238 IRLMILYVESISSLDMRXXXXXXXXXXXXSEWPVSTIGTF 1119
IRLMIL VESIS+LDMR SE PVST+GTF
Sbjct: 456 IRLMIL*VESISALDMRPCFSSCSSLFLPSE*PVSTMGTF 575
Score = 139 bits (298), Expect(3) = 1e-062
Identities = 58/77 (75%), Positives = 62/77 (80%)
Frame = -3 / +2
Query: 1449 YNIAEIHSRRNHHHPRHVTTMAANPAPRPCPQHFLKLDIKSIVQSPLLINLLPCARDYKL 1270
Y ++ +HHPRH TTMAANP PRP QHFLKLD+KSIV SPL INLLPCARD KL
Sbjct: 245 YLVSTTRDLNTYHHPRHETTMAANPTPRPGSQHFLKLDVKSIV*SPLFINLLPCARDDKL 424
Query: 1269 *RIQGQLLTLDTPHDLV 1219
*RIQGQLLTLDTPHDLV
Sbjct: 425 *RIQGQLLTLDTPHDLV 475
Score = 87.7 bits (185), Expect(3) = 1e-062
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = -3 / +2
Query: 1152 K*VASEHHWHIQRTRKESSNISSIGIVPMYHVRQYWPPISNLL 1024
K*V SEHH HIQRT +ESSNISSIGIV MYHVRQYW PISNLL
Sbjct: 542 K*VTSEHHGHIQRTGEESSNISSIGIVSMYHVRQYWLPISNLL 670
Score = 72.5 bits (152), Expect(3) = 4e-097
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +3 / -2
Query: 1440 QCCSS*RH*WGW*RQR*YRWFGGCLTQVNAPN 1535
Q C S*RH*WGW*+QR*YRWFGGCLTQVNA N
Sbjct: 121 QQCYS*RH*WGW*QQR*YRWFGGCLTQVNASN 26
Score = 66.6 bits (139), Expect(3) = 4e-091
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2 / -1
Query: 1451 FMKTLMGMVTSKMISLVWRVPHPSQCPQFG 1540
F+KTLMGMVT+KMISLVWR+PHPSQC Q G
Sbjct: 110 FLKTLMGMVTAKMISLVWRLPHPSQCLQLG 21
Score = 63.8 bits (133), Expect(3) = 1e-073
Identities = 27/34 (79%), Positives = 27/34 (79%)
Frame = -3 / +1
Query: 1551 HHFGPNWGH*LG*GTLQTNDIIFDVTIPINVFMN 1450
H PNW H*LG*G LQTNDIIF VTIPINVF N
Sbjct: 10 HQPQPNWRH*LG*GNLQTNDIIFAVTIPINVFRN 111
Score = 63.4 bits (132), Expect(3) = 1e-062
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -2 / +3
Query: 1537 KLGALTWVRHPPNQRYHL*RHHPHQCLHE 1451
+L ALTWVR PPNQRYHL HHPHQCL E
Sbjct: 24 QLEALTWVRQPPNQRYHLCCHHPHQCLQE 110
Score = 34.5 bits (69), Expect(2) = 3e-038
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1 / +3
Query: 1064 IT*GSTGLPFPTCS 1023
IT*GSTG PFPTCS
Sbjct: 630 IT*GSTGFPFPTCS 671
Score = 31.3 bits (62), Expect(3) = 4e-097
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1 / -3
Query: 1414 VIPPGMDFSNVV 1449
VIPPGMDFSNV+
Sbjct: 144 VIPPGMDFSNVI 109
Score = 27.2 bits (53), Expect(2) = 3e-067
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / -3
Query: 1501 LEGASPKSMPPI 1536
LE ASPKSMPPI
Sbjct: 60 LEVASPKSMPPI 25
Score = 26.3 bits (51), Expect(3) = 4e-091
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / -2
Query: 1413 GDSSGNGFQQCCS 1451
GDSS NG QQC S
Sbjct: 145 GDSSRNGLQQCYS 107
Score = 25.8 bits (50), Expect(3) = 1e-073
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / +1
Query: 1446 NIAEIHSRRNH 1414
NIAE+HS RNH
Sbjct: 112 NIAEVHSWRNH 144
>gb|BG054150.1|BG054150 OV2_1_H05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 461
Score = 352 bits (763), Expect = 2e-095
Identities = 148/152 (97%), Positives = 150/152 (98%)
Frame = +1 / +1
Query: 907 RIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNGRPVLPYVIHGHYADA 1086
R PCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNG+PVLPYVIHGHYADA
Sbjct: 4 RGPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNGKPVLPYVIHGHYADA 183
Query: 1087 GDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSKEEIDSTYKIMRRIEGEELALDA 1266
GDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSK EIDSTYKIMRRIEGEEL+LDA
Sbjct: 184 GDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSKAEIDSTYKIMRRIEGEELSLDA 363
Query: 1267 SELVITSTRQEIDEQWGLYDGFDVKLEKVLRA 1362
SELVITSTRQEIDEQWGLYDGFDVKLEKVLRA
Sbjct: 364 SELVITSTRQEIDEQWGLYDGFDVKLEKVLRA 459
Score = 333 bits (722), Expect = 9e-090
Identities = 128/149 (85%), Positives = 134/149 (89%)
Frame = +3 / +3
Query: 912 TVWAAG*IPQEGSVVALPPRVCRWSPCAYPEHVQGSGRAGWKWEASTALRDTWALCRCWR 1091
TVWA *IPQEGS VALPPR+CRWS CAYPEHVQGSGRAGWKWEASTALRDTW LCRCWR
Sbjct: 9 TVWATR*IPQEGSAVALPPRICRWSSCAYPEHVQGSGRAGWKWEASTALRDTWTLCRCWR 188
Query: 1092 CCCSPFWCAECANGAHWPLTWEEQAGTTAEARAHVQGGDRFDIQDHEAYRG*GAGPGCVR 1271
CCCSP CAECA+GAHW LTWEEQAG TAEARAHV GDRF++QDHEAYRG*GA PGCVR
Sbjct: 189 CCCSPLRCAECAHGAHWSLTWEEQAGATAEARAHV*SGDRFNLQDHEAYRG*GAVPGCVR 368
Query: 1272 ACNHEHKAGD**AVGIVRWI*CQA*ESAE 1358
AC+HEHKAGD** VGI+RWI* QA*ES E
Sbjct: 369 ACHHEHKAGD**TVGIIRWI*RQA*ESVE 455
Score = 297 bits (642), Expect = 1e-078
Identities = 127/149 (85%), Positives = 129/149 (86%)
Frame = -2 / -2
Query: 1357 SALSQA*HQIHRTIPTAHQSPALCS*LQALTHPGPAPHPRYAS*SCMSNRSPPWTCALAS 1178
S LSQA* QIHR IPT HQSPALCS* QALTHPG APHPRYAS*SC N SP TCALAS
Sbjct: 454 STLSQA*RQIHRIIPTVHQSPALCS**QALTHPGTAPHPRYAS*SCRLNLSPL*TCALAS 275
Query: 1177 AVVPACSSQVSGQ*APLAHSAHQKGEQQHLQHRHSAHVSRKAVLASHFQPALPEPWTCSG 998
AV PACSSQVS Q*AP AHSAH++GEQQHLQHRHS HVSRKAVLASHFQPALPEPWTCSG
Sbjct: 274 AVAPACSSQVSDQ*APWAHSAHRRGEQQHLQHRHSVHVSRKAVLASHFQPALPEPWTCSG 95
Query: 997 YAQGLHRQTLGGKATTLPS*GIYPAAHTV 911
YAQ LHRQ LGGKAT LPS*GIY AHTV
Sbjct: 94 YAQELHRQILGGKATALPS*GIYRVAHTV 8
Score = 291 bits (629), Expect = 6e-077
Identities = 127/148 (85%), Positives = 132/148 (89%)
Frame = +2 / +2
Query: 914 RVGRGINTSRRKRCGLTSKSLSMEPLRIS*TCPRLWESRLEMGGQYCLT*YMGTMPMLEM 1093
RVG INTSRRKRCGLTSK+LSME LRIS*TCPRLWESRLEMG QYCLT*YM TMPMLEM
Sbjct: 11 RVGHAINTSRRKRCGLTSKNLSMELLRIS*TCPRLWESRLEMGSQYCLT*YMDTMPMLEM 190
Query: 1094 LLLSFLVR*MCQWCSLATHLGGTSWNNC*SKGACPRRRSIRHTRS*GVSRVRSWPWMRQS 1273
LLLS VR*MC WCSL THLGGTSW+NC*SKGAC +RR I+ TRS*GVSRVRS PWMRQS
Sbjct: 191 LLLSSPVR*MCPWCSLVTHLGGTSWSNC*SKGACLKRR*IQPTRS*GVSRVRSCPWMRQS 370
Query: 1274 L*SRAQGRRLMSSGDCTMDLMSSLRKC* 1357
L SRAQGRRLM+SGD TMDL SSLRKC*
Sbjct: 371 LSSRAQGRRLMNSGDYTMDLTSSLRKC* 454
Score = 161 bits (346), Expect(2) = 4e-061
Identities = 70/80 (87%), Positives = 71/80 (88%)
Frame = -3 / -3
Query: 1152 K*VASEHHWHIQRTRKESSNISSIGIVPMYHVRQYWPPISNLLSQSLGHVQDMRKGSIDK 973
K*V SEHH HIQRT +ESSNISSIGIV MYHVRQYW PISNLLSQSLGHVQDMRK SIDK
Sbjct: 249 K*VTSEHHGHIQRTGEESSNISSIGIVSMYHVRQYWLPISNLLSQSLGHVQDMRKSSIDK 70
Query: 972 LLEVRPQRFLLEVFIPRPTR 913
LEVRPQRFLLEVFI PTR
Sbjct: 69 FLEVRPQRFLLEVFIAWPTR 10
Score = 125 bits (268), Expect(2) = 5e-054
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = -1 / -1
Query: 1064 IT*GSTGLPFPTCSPRALDMFRICARAPSTNSWR*GHNASFLRYLSRGPHGMR 906
IT*GSTG PFPTCSPRALDMFRICARAPSTNSWR*GH+ASFLRYLSRGPHG R
Sbjct: 161 IT*GSTGFPFPTCSPRALDMFRICARAPSTNSWR*GHSASFLRYLSRGPHGPR 3
Score = 109 bits (233), Expect(2) = 5e-054
Identities = 53/82 (64%), Positives = 57/82 (69%)
Frame = -1 / -1
Query: 1364 RALSTFSSLTSNPSYNPHCSSISCLVLVITXXXXXXXXXXXSIRLMILYVESISSLDMRX 1185
RAL+TFSSLTSNPSYNPHCSSISCLVLV+T SIRLMIL VESIS+LDMR
Sbjct: 461 RALNTFSSLTSNPSYNPHCSSISCLVLVMTSSDASRDSSSPSIRLMIL*VESISALDMRP 282
Query: 1184 XXXXXXXXXXXSEWPVSTIGTF 1119
SE PVST+GTF
Sbjct: 281 CFSSCSSLFLPSE*PVSTMGTF 216
Score = 97.7 bits (207), Expect(2) = 4e-061
Identities = 42/46 (91%), Positives = 43/46 (93%)
Frame = -3 / -3
Query: 1356 QHFLKLDIKSIVQSPLLINLLPCARDYKL*RIQGQLLTLDTPHDLV 1219
QHFLKLD+KSIV SPL INLLPCARD KL*RIQGQLLTLDTPHDLV
Sbjct: 453 QHFLKLDVKSIV*SPLFINLLPCARDDKL*RIQGQLLTLDTPHDLV 316
>gb|BE596045.1|BE596045 PI1_51_F11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 700
Score = 341 bits (738), Expect(3) = 2e-095
Identities = 148/176 (84%), Positives = 156/176 (88%)
Frame = +1 / +1
Query: 2836 DGSGDAVEQDVASSNAHCVAFLIKDPQKVKTVDXXXXXXXXXXXXCHIMYCRNSTRLQVV 3015
DGS DAVE DVASSNAHC AFLIKDP+KVKTVD CHIMYCRN+TRLQVV
Sbjct: 1 DGSDDAVELDVASSNAHCFAFLIKDPKKVKTVDEMRERLRMRGLRCHIMYCRNATRLQVV 180
Query: 3016 PLLASRSQALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEAL 3195
PLLASRSQALRYL VRWG+SVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEAL
Sbjct: 181 PLLASRSQALRYLFVRWGLSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEAL 360
Query: 3196 VRSPGSYKRDDVVPSETPLAAYTTGELKADEIMRALKQVSKTSSGM*I*CFFYILS 3363
+RS GSYKRDDVVP+ETPLAAYTTGELKADEIMRALKQVSKTSSGM*I C+ ++S
Sbjct: 361 LRSSGSYKRDDVVPTETPLAAYTTGELKADEIMRALKQVSKTSSGM*ICCWVRLIS 528
Score = 329 bits (712), Expect(3) = 2e-092
Identities = 139/170 (81%), Positives = 147/170 (86%)
Frame = -3 / -2
Query: 3345 ASNSHAAGSLGDLLQSPHDLVGLQLTSRVRSQGGLRRDDIVPLVASWAPHQCFRTLLGDA 3166
A+NSHAAGSL DLLQSPHDL+GLQLTSRVRSQGGL RDD+VPLV S AP Q FRTLLGD
Sbjct: 510 AANSHAAGSLRDLLQSPHDLIGLQLTSRVRSQGGLSRDDVVPLVTSRAPQQRFRTLLGDT 331
Query: 3165 TDDHGLV*PG*HLL*IGVAMFPGDQIHVPHRYAPAHGKIPECL*P*C*QRDNLKPCRVPA 2986
DD LV*P *HLL*IG+AMFP DQIHVPHR APAH K+PECL*P*C*Q DNLK CRVPA
Sbjct: 330 PDDDSLV*PR*HLL*IGIAMFPSDQIHVPHR*APAHEKVPECL*P*C*QGDNLKSCRVPA 151
Query: 2985 VHDVAAETTHPQPLPHLIDRFHLLGVFDEERDTVCITGRHVLLDSVA*TV 2836
VHDVA ETTHPQPL HLIDRFHL G+FDEER+ VCI GRHV LDS+ *TV
Sbjct: 150 VHDVAPETTHPQPLSHLIDRFHLFGIFDEEREAVCIAGRHVQLDSIV*TV 1
Score = 304 bits (658), Expect(2) = 2e-082
Identities = 129/159 (81%), Positives = 132/159 (83%)
Frame = +3 / +3
Query: 2871 VQ*CTLCRVPHQRPPKGENGR*DEGAAEDAWSPLPHHVLQELDKASGCPSASIKVTGTQV 3050
VQ CTL RVPHQR KGENGR*DE AEDAWSP+PHHVLQE DK SGCP ASIKVTGTQV
Sbjct: 36 VQQCTLLRVPHQRSQKGENGR*DEREAEDAWSPVPHHVLQERDKTSGCPPASIKVTGTQV 215
Query: 3051 SFRALGRICGEHVSDHRGTWRHRSRGDAIRATQDRDRPWRHREGFGSTGEEPRKLQEGRC 3230
FRALG ICGEHVSDH GTWR+RSRGDAI TQD RP HREGFGS EE KLQEGR
Sbjct: 216 PFRALGPICGEHVSDHWGTWRYRSRGDAIWVTQDCHRPGCHREGFGSAAEELGKLQEGRR 395
Query: 3231 RPV*DPLGCVHDW*AEGRRDHAGSEASLQDFQRHVNLML 3347
RP *DPLGCVHDW*AEGR DHAGSEA L DFQRHVNL+L
Sbjct: 396 RPD*DPLGCVHDW*AEGR*DHAGSEAGL*DFQRHVNLLL 512
Score = 285 bits (617), Expect = 3e-075
Identities = 128/170 (75%), Positives = 130/170 (76%)
Frame = +2 / +2
Query: 2837 TVQATLSSRTWRPVMHTVXXXXXXXXXXXXXXMR*GSG*GCVVSAATSCTAGTRQGFRLS 3016
TVQ LSS TWRP MHT MR* G*GCVVS ATSCTAGTRQ FRLS
Sbjct: 2 TVQTMLSSWTWRPAMHTASRSSSKIPKR*KRSMR*ERG*GCVVSGATSCTAGTRQDFRLS 181
Query: 3017 LC*HQGHRHSGIFPCAGAYLWGTCI*SPGNMATPI*RRCYPGYTRP*SSVASPRRVRKHW 3196
C*HQGHRHSG F CAGAYLWGTCI*S GNMA PI*RRCY GYTR SS SPRRVRK
Sbjct: 182 PC*HQGHRHSGTFSCAGAYLWGTCI*SLGNMAIPI*RRCYLGYTRLSSSGVSPRRVRKRC 361
Query: 3197 *GAQEATRGTMSSRLRPPWLRTRLVS*RPTRSCGL*SKSPRLPAACEFDA 3346
*GA+E TRGT SSRLRPPWLRTRLVS*RP RSCGL*S+S RLPAACEF A
Sbjct: 362 *GAREVTRGTTSSRLRPPWLRTRLVS*RPMRSCGL*SRSLRLPAACEFAA 511
Score = 213 bits (460), Expect(3) = 4e-066
Identities = 93/116 (80%), Positives = 98/116 (84%)
Frame = -2 / -1
Query: 3346 SIKFTCRWKSWRLASEPA*SRRPSAHQSCTQPRGSQTGRHRPSCSFLGSSPVLPNPSR*R 3167
S KFTCRWKS R ASEPA*S RPSAHQSCTQPRGSQ+GR RPSC+F SS LPNPSR*
Sbjct: 511 SSKFTCRWKS*RPASEPA*SHRPSAHQSCTQPRGSQSGRRRPSCNFPSSSAALPNPSR*H 332
Query: 3166 HGRSRSCVARIASPLDRCRHVPR*SDTCSPQIRPSARKDT*VPVTLMLAEGQPEAL 2999
GR +SCV +IASPLDR RHVP+*SDTCSPQI PSARK T*VPVTLMLA GQPE L
Sbjct: 331 PGR*QSCVTQIASPLDRYRHVPQ*SDTCSPQIGPSARKGT*VPVTLMLAGGQPEVL 164
Score = 144 bits (310), Expect(4) = 9e-056
Identities = 64/84 (76%), Positives = 65/84 (77%)
Frame = -1 / -3
Query: 3089 YMFPTDTPQRTERYLSACDLDASRGTT*SLVEFLQYMMWQXXXXXXXXXXXXSTVFTFWG 2910
YMFPTD PQRT+RYLSACDLDASRGTT*SLV FLQYMMW STVFTF G
Sbjct: 254 YMFPTDRPQRTKRYLSACDLDASRGTT*SLVAFLQYMMWHRRPRILSLSLISSTVFTFLG 75
Query: 2909 SLMRNATQCALLDATSCSTASPEP 2838
SLMRNA QCALLDATS STAS EP
Sbjct: 74 SLMRNAKQCALLDATSSSTASSEP 3
Score = 74.4 bits (156), Expect(4) = 9e-056
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = -1 / -3
Query: 3347 KHQIHMPLEVLETCFRARMISSAFSSPVVYAAK 3249
+ QIHMPLEVLETCFRARMISSAFSSPVVYAAK
Sbjct: 512 QQQIHMPLEVLETCFRARMISSAFSSPVVYAAK 414
Score = 50.6 bits (104), Expect(3) = 4e-066
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -2 / -1
Query: 2908 L**GTRHSVHYWTPRPARQRRLNR 2837
L**GTR SVH WTPRPARQ RLNR
Sbjct: 73 L**GTRSSVHCWTPRPARQHRLNR 2
Score = 31.3 bits (62), Expect(4) = 9e-056
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -1 / -3
Query: 3185 EPFSVTPRTITVL 3147
EPFSVTPRT+TVL
Sbjct: 350 EPFSVTPRTMTVL 312
Score = 30.4 bits (60), Expect(3) = 4e-066
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2 / -2
Query: 3448 VSCFICHCNIYIHTRGTVHNLFYIAVKKR 3362
+S + C+ I+TRGTVH LF + +++
Sbjct: 666 ISSVLVICHCNIYTRGTVHKLFMCSSEEK 580
Score = 29.5 bits (58), Expect(3) = 2e-095
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 3385 ISCEQYRGCVY 3417
I CEQYRGC+Y
Sbjct: 603 IICEQYRGCIY 635
Score = 29.0 bits (57), Expect(3) = 2e-092
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -1
Query: 3416 YTHPRYCSQLI 3384
Y HPRYCSQ+I
Sbjct: 634 YIHPRYCSQII 602
Score = 27.2 bits (53), Expect(4) = 9e-056
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -3
Query: 3417 IYTPAVLFTTY 3385
IYTPAVLFT Y
Sbjct: 635 IYTPAVLFTNY 603
Score = 25.8 bits (50), Expect(2) = 2e-082
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +1
Query: 3383 K*VVNSTAGVYIYI 3424
K* VNSTAGVYI +
Sbjct: 601 K*FVNSTAGVYIAV 642
Score = 24.4 bits (47), Expect(3) = 2e-092
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -2
Query: 3436 ICHCNIY 3416
ICHCNIY
Sbjct: 648 ICHCNIY 628
Score = 22.1 bits (42), Expect(3) = 2e-095
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2 / +3
Query: 3443 GHC*LYW 3463
GHC* YW
Sbjct: 654 GHC*FYW 674
>gb|BE596273.1|BE596273 PI1_51_F11.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 485
Score = 250 bits (541), Expect = 8e-065
Identities = 100/124 (80%), Positives = 105/124 (84%)
Frame = +3 / +3
Query: 1413 GDSSGNGFQQCCSS*RH*WGW*RQR*YRWFGGCLTQVNAPNLGRSDAVPDQPSQADDPGV 1592
G S Q C S*RH*WGW*+QR*YRWFGGCLTQVNA NLG DAVP+QPSQADDP
Sbjct: 114 GGDSSRNGLQQCYS*RH*WGW*QQR*YRWFGGCLTQVNASNLG*GDAVPNQPSQADDPRF 293
Query: 1593 IKTRPEEEHHYPRQSVWRVSSTQGTCKPYSDHG*QR*HRRHVCWQCQCPHHSSEAD*QV* 1772
+K RPEEEHHYPRQSVWRV TQGTCKPYSDHG QR*HRR+VCW+CQCPHHSSEAD*QV*
Sbjct: 294 VKARPEEEHHYPRQSVWRVPPTQGTCKPYSDHGEQR*HRRNVCWECQCPHHSSEAD*QV* 473
Query: 1773 SVRK 1784
SV K
Sbjct: 474 SVWK 485
Score = 226 bits (487), Expect(2) = 5e-080
Identities = 94/111 (84%), Positives = 96/111 (86%)
Frame = -3 / -3
Query: 1782 SVQIILVNQLQNCGEDTGIASRHVVDVISVTHDQSKVCKFPEWTTLSKRFDEGSDVLLRV 1603
S+QIILVNQLQNCGEDTGI SRH VDVISV HDQSKVCKFPEW LSKRFDEGSDVLLRV
Sbjct: 483 SIQIILVNQLQNCGEDTGIPSRHFVDVISVPHDQSKVCKFPEWAALSKRFDEGSDVLLRV 304
Query: 1602 WS**RQDHRLVRVGQEPHHFGPNWGH*LG*GTLQTNDIIFDVTIPINVFMN 1450
W * +DHRLVRVG EPHH PNW H*LG*G LQTNDIIF VTIPINVF N
Sbjct: 303 WP*QSEDHRLVRVG*EPHHLSPNWRH*LG*GNLQTNDIIFAVTIPINVFRN 151
Score = 223 bits (482), Expect(2) = 4e-079
Identities = 93/111 (83%), Positives = 94/111 (84%)
Frame = -2 / -2
Query: 1783 FRTDHTCQSASELW*GHWHCQQTCRRCHLCYP*SE*GLQVP*VDDTLQTL*RG**CSSSG 1604
F TDHTCQSASELW*GHWH QQT RRCHLC P*SE*GLQVP*V TLQTL*RG**CSSSG
Sbjct: 484 FHTDHTCQSASELW*GHWHSQQTFRRCHLCSP*SE*GLQVP*VGGTLQTL*RG**CSSSG 305
Query: 1603 LVLITPGSSACEGWSGTASLRPKLGALTWVRHPPNQRYHL*RHHPHQCLHE 1451
L L GSSACEGW GTAS +PKL ALTWVR PPNQRYHL HHPHQCL E
Sbjct: 304 LALTKRGSSACEGWLGTASPQPKLEALTWVRQPPNQRYHLCCHHPHQCLQE 152
Score = 220 bits (474), Expect(2) = 4e-085
Identities = 92/94 (97%), Positives = 93/94 (98%)
Frame = +1 / +1
Query: 1501 LEGASPKSMPPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLT 1680
LE ASPKSMPPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLT
Sbjct: 202 LEVASPKSMPPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLT 381
Query: 1681 LIMGNRDDIDDMSAGNASVLTTVLKLIDKYDLYG 1782
LIMGNRDDID+MSAGNASVLTTVLKLIDKYDLYG
Sbjct: 382 LIMGNRDDIDEMSAGNASVLTTVLKLIDKYDLYG 483
Score = 213 bits (460), Expect(2) = 2e-075
Identities = 95/111 (85%), Positives = 99/111 (89%)
Frame = +2 / +2
Query: 1451 FMKTLMGMVTSKMISLVWRVPHPSQCPQFGPK*CGS*PTLTSR*SWRYQDQTRRRTSLPS 1630
F+KTLMGMVT+KMISLVWR+PHPSQC QFG +*CGS*PTLTSR*S Q QTRRRTSLPS
Sbjct: 152 FLKTLMGMVTAKMISLVWRLPHPSQCLQFGLR*CGS*PTLTSR*SSLCQGQTRRRTSLPS 331
Query: 1631 SKRLESVVHSGNLQTLL*SWVTEMTSTTCLLAMPVSSPQF*S*LTSMICTE 1783
SKRLES HSGNLQTLL*SW TEMTST CLL MPVSSPQF*S*LTSMIC E
Sbjct: 332 SKRLESAAHSGNLQTLL*SWGTEMTSTKCLLGMPVSSPQF*S*LTSMICME 484
Score = 198 bits (427), Expect(2) = 4e-060
Identities = 88/92 (95%), Positives = 89/92 (96%)
Frame = -1 / -1
Query: 1784 LPYRSYLSISFRTVVRTLALPADMSSMSSLLPMIRVRFASSLSGRHSPNALTRVVMFFFG 1605
LPYRSYLSISFRTVVRTLA PAD+SSMSSL PMIRVRFASSLSGRHSPNALTRVVMFFFG
Sbjct: 485 LPYRSYLSISFRTVVRTLAFPADISSMSSLFPMIRVRFASSLSGRHSPNALTRVVMFFFG 306
Query: 1604 SGLDNARIIGL*GLVRNRITSAQIGGIDLGEA 1509
SGLD ARIIGL*GLVRNRITSAQIGGIDLGEA
Sbjct: 305 SGLDKARIIGL*GLVRNRITSAQIGGIDLGEA 210
Score = 119 bits (254), Expect(2) = 4e-085
Identities = 46/48 (95%), Positives = 48/48 (100%)
Frame = +1 / +1
Query: 1306 EQWGLYDGFDVKLEKVLRARARRGVSCHGRYMPRMVVIPPGMDFSNVV 1449
EQWGLYDGFDVKLEKVLRARARRGVSCHGR+MPRMVVIPPGMDFSNV+
Sbjct: 10 EQWGLYDGFDVKLEKVLRARARRGVSCHGRFMPRMVVIPPGMDFSNVI 153
Score = 96.4 bits (204), Expect(2) = 5e-080
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = -3 / -3
Query: 1446 NIAEIHSRRNHHHPRHVTTMAANPAPRPCPQHFLKLDIKSIVQSPL 1309
NIAE+HS RNHHHPRH TTMAANP PRP QHFLKLD+KSIV SPL
Sbjct: 150 NIAEVHSWRNHHHPRHETTMAANPTPRPGSQHFLKLDVKSIV*SPL 13
Score = 95.5 bits (202), Expect(2) = 4e-079
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = -1 / -1
Query: 1424 GGITTILGM*RPWQLTPRLARALSTFSSLTSNPSYNPHCS 1305
GGITTILGM RPWQLTPRLARAL+TFSSLTSNPSYNPHCS
Sbjct: 128 GGITTILGMKRPWQLTPRLARALNTFSSLTSNPSYNPHCS 9
Score = 93.2 bits (197), Expect(2) = 2e-075
Identities = 38/48 (79%), Positives = 42/48 (87%)
Frame = +2 / +2
Query: 1304 MSSGDCTMDLMSSLRKC*GHGRGAGLAAMVVTCLGWW*FLREWISAML 1447
++SGD TMDL SSLRKC* GRG GLAAMVV+CLGWW*FL+EW SAML
Sbjct: 8 VNSGDYTMDLTSSLRKC*EPGRGVGLAAMVVSCLGWW*FLQEWTSAML 151
Score = 57.4 bits (119), Expect(2) = 4e-060
Identities = 29/47 (61%), Positives = 30/47 (63%)
Frame = -2 / -2
Query: 1444 HC*NXXXXXXXXX*ACNDHGS*PRASPVPSALSQA*HQIHRTIPTAH 1304
HC*+ *A NDHGS*P ASP S LSQA* QIHR IPT H
Sbjct: 148 HC*SPFLEESPPS*A*NDHGS*PHASPGLSTLSQA*RQIHRIIPTVH 8
>gb|BZ412900.1|BZ412900 181g10_ctg5 Subclones from BAC clones mapped to Sorghum bicolor
chromosome 3 Sorghum bicolor genomic clone 181g10, DNA
sequence
Length = 697
Score = 221 bits (478), Expect(3) = 2e-081
Identities = 95/106 (89%), Positives = 101/106 (95%)
Frame = +1 / +2
Query: 3046 RYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEALVRSPGSYKRD 3225
RYL VRWG+SVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEAL+RS GSYKRD
Sbjct: 257 RYLFVRWGLSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEALLRSSGSYKRD 436
Query: 3226 DVVPSETPLAAYTTGELKADEIMRALKQVSKTSSGM*I*CFFYILS 3363
DVVP+ETPLAAYTTGELKADEIMRALKQVSKTSSGM*I C+ ++S
Sbjct: 437 DVVPTETPLAAYTTGELKADEIMRALKQVSKTSSGM*ICCWVRLIS 574
Score = 190 bits (410), Expect(3) = 5e-074
Identities = 82/101 (81%), Positives = 87/101 (86%)
Frame = -3 / -1
Query: 3345 ASNSHAAGSLGDLLQSPHDLVGLQLTSRVRSQGGLRRDDIVPLVASWAPHQCFRTLLGDA 3166
A+NSHAAGSL DLLQSPHDL+GLQLTSRVRSQGGL RDD+VPLV S AP Q FRTLLGD
Sbjct: 556 AANSHAAGSLRDLLQSPHDLIGLQLTSRVRSQGGLSRDDVVPLVTSRAPQQRFRTLLGDT 377
Query: 3165 TDDHGLV*PG*HLL*IGVAMFPGDQIHVPHRYAPAHGKIPE 3043
DD LV*P *HLL*IG+AMFP DQIHVPHR APAH K+PE
Sbjct: 376 PDDDSLV*PR*HLL*IGIAMFPSDQIHVPHR*APAHEKVPE 254
Score = 189 bits (408), Expect(3) = 2e-066
Identities = 81/101 (80%), Positives = 83/101 (82%)
Frame = +3 / +1
Query: 3045 QVSFRALGRICGEHVSDHRGTWRHRSRGDAIRATQDRDRPWRHREGFGSTGEEPRKLQEG 3224
QV FRALG ICGEHVSDH GTWR+RSRGDAI TQD RP HREGFGS EE KLQEG
Sbjct: 256 QVPFRALGPICGEHVSDHWGTWRYRSRGDAIWVTQDCHRPGCHREGFGSAAEELGKLQEG 435
Query: 3225 RCRPV*DPLGCVHDW*AEGRRDHAGSEASLQDFQRHVNLML 3347
R RP *DPLGCVHDW*AEGR DHAGSEA L DFQRHVNL+L
Sbjct: 436 RRRPD*DPLGCVHDW*AEGR*DHAGSEAGL*DFQRHVNLLL 558
Score = 187 bits (403), Expect(2) = 4e-060
Identities = 83/101 (82%), Positives = 85/101 (84%)
Frame = +2 / +3
Query: 3044 SGIFPCAGAYLWGTCI*SPGNMATPI*RRCYPGYTRP*SSVASPRRVRKHW*GAQEATRG 3223
SG F CAGAYLWGTCI*S GNMA PI*RRCY GYTR SS SPRRVRK *GA+E TRG
Sbjct: 255 SGTFSCAGAYLWGTCI*SLGNMAIPI*RRCYLGYTRLSSSGVSPRRVRKRC*GAREVTRG 434
Query: 3224 TMSSRLRPPWLRTRLVS*RPTRSCGL*SKSPRLPAACEFDA 3346
T SSRLRPPWLRTRLVS*RP RSCGL*S+S RLPAACEF A
Sbjct: 435 TTSSRLRPPWLRTRLVS*RPMRSCGL*SRSLRLPAACEFAA 557
Score = 185 bits (398), Expect(3) = 2e-061
Identities = 80/101 (79%), Positives = 85/101 (84%)
Frame = -2 / -3
Query: 3346 SIKFTCRWKSWRLASEPA*SRRPSAHQSCTQPRGSQTGRHRPSCSFLGSSPVLPNPSR*R 3167
S KFTCRWKS R ASEPA*S RPSAHQSCTQPRGSQ+GR RPSC+F SS LPNPSR*
Sbjct: 557 SSKFTCRWKS*RPASEPA*SHRPSAHQSCTQPRGSQSGRRRPSCNFPSSSAALPNPSR*H 378
Query: 3166 HGRSRSCVARIASPLDRCRHVPR*SDTCSPQIRPSARKDT* 3044
GR +SCV +IASPLDR RHVP+*SDTCSPQI PSARK T*
Sbjct: 377 PGR*QSCVTQIASPLDRYRHVPQ*SDTCSPQIGPSARKGT* 255
Score = 101 bits (215), Expect(3) = 5e-074
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = -3 / -2
Query: 3051 IPECL*P*C*QRDNLKPCRVPAVHDVAAETTHPQPLPHLIDRFHLL 2914
+PECL*P*C*Q DNLK CRVPAVHDVA ETTHPQPL HLIDRFHL+
Sbjct: 147 LPECL*P*C*QGDNLKSCRVPAVHDVAPETTHPQPLSHLIDRFHLI 10
Score = 94.5 bits (200), Expect(3) = 2e-081
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = +3 / +3
Query: 2919 GENGR*DEGAAEDAWSPLPHHVLQELDKASGCPSASIKVTGTQV 3050
GENGR*DE AEDAWSP+PHHVLQE DK SGCP ASIKVTGTQV
Sbjct: 15 GENGR*DEREAEDAWSPVPHHVLQERDKTSGCPPASIKVTGTQV 146
Score = 80.3 bits (169), Expect(3) = 2e-066
Identities = 34/39 (87%), Positives = 34/39 (87%)
Frame = +2 / +2
Query: 2933 MR*GSG*GCVVSAATSCTAGTRQGFRLSLC*HQGHRHSG 3049
MR* G*GCVVS ATSCTAGTRQ FRLS C*HQGHRHSG
Sbjct: 29 MR*ERG*GCVVSGATSCTAGTRQDFRLSPC*HQGHRHSG 145
Score = 74.4 bits (156), Expect(5) = 6e-029
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = -1 / -2
Query: 3347 KHQIHMPLEVLETCFRARMISSAFSSPVVYAAK 3249
+ QIHMPLEVLETCFRARMISSAFSSPVVYAAK
Sbjct: 558 QQQIHMPLEVLETCFRARMISSAFSSPVVYAAK 460
Score = 68.4 bits (143), Expect(2) = 4e-060
Identities = 30/43 (69%), Positives = 31/43 (72%)
Frame = +1 / +1
Query: 2920 VKTVDXXXXXXXXXXXXCHIMYCRNSTRLQVVPLLASRSQALR 3048
VKTVD CHIMYCRN+TRLQVVPLLASRSQALR
Sbjct: 16 VKTVDEMRERLRMRGLRCHIMYCRNATRLQVVPLLASRSQALR 144
Score = 66.1 bits (138), Expect(3) = 2e-061
Identities = 30/44 (68%), Positives = 30/44 (68%)
Frame = -1 / -3
Query: 3050 YLSACDLDASRGTT*SLVEFLQYMMWQXXXXXXXXXXXXSTVFT 2919
YLSACDLDASRGTT*SLV FLQYMMW STVFT
Sbjct: 146 YLSACDLDASRGTT*SLVAFLQYMMWHRRPRILSLSLISSTVFT 15
Score = 36.8 bits (74), Expect(5) = 6e-029
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / -2
Query: 3089 YMFPTDTPQRTERYL 3045
YMFPTD PQRT+RYL
Sbjct: 300 YMFPTDRPQRTKRYL 256
Score = 34.1 bits (68), Expect(5) = 6e-029
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2 / -1
Query: 3049 T*VPVTLMLAEGQPEAL 2999
T*VPVTLMLA GQPE L
Sbjct: 145 T*VPVTLMLAGGQPEVL 95
Score = 31.3 bits (62), Expect(5) = 6e-029
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -1 / -2
Query: 3185 EPFSVTPRTITVL 3147
EPFSVTPRT+TVL
Sbjct: 396 EPFSVTPRTMTVL 358
Score = 29.5 bits (58), Expect(3) = 2e-081
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 3385 ISCEQYRGCVY 3417
I CEQYRGC+Y
Sbjct: 649 IICEQYRGCIY 681
Score = 29.0 bits (57), Expect(3) = 5e-074
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -3
Query: 3416 YTHPRYCSQLI 3384
Y HPRYCSQ+I
Sbjct: 680 YIHPRYCSQII 648
Score = 27.2 bits (53), Expect(3) = 2e-061
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -2
Query: 3417 IYTPAVLFTTY 3385
IYTPAVLFT Y
Sbjct: 681 IYTPAVLFTNY 649
Score = 26.7 bits (52), Expect(5) = 6e-029
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -2 / -1
Query: 3430 HCNIYIHTRGTVHNLFYIAVKKR 3362
+ ++ I+TRGTVH LF + +++
Sbjct: 694 YLSLNIYTRGTVHKLFMCSSEEK 626
Score = 25.4 bits (49), Expect(3) = 2e-066
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / +2
Query: 3383 K*VVNSTAGVYI 3418
K* VNSTAGVYI
Sbjct: 647 K*FVNSTAGVYI 682
>gb|CW213623.1|CW213623 104_645_11191655_116_37034_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11191655, DNA
sequence
Length = 683
Score = 221 bits (478), Expect(2) = 3e-078
Identities = 95/106 (89%), Positives = 101/106 (95%)
Frame = +1 / +2
Query: 3046 RYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEALVRSPGSYKRD 3225
RYL VRWG+SVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEAL+RS GSYKRD
Sbjct: 338 RYLFVRWGLSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEALLRSSGSYKRD 517
Query: 3226 DVVPSETPLAAYTTGELKADEIMRALKQVSKTSSGM*I*CFFYILS 3363
DVVP+ETPLAAYTTGELKADEIMRALKQVSKTSSGM*I C+ ++S
Sbjct: 518 DVVPTETPLAAYTTGELKADEIMRALKQVSKTSSGM*ICCWVRLIS 655
Score = 190 bits (410), Expect(2) = 5e-071
Identities = 82/101 (81%), Positives = 87/101 (86%)
Frame = -3 / -2
Query: 3345 ASNSHAAGSLGDLLQSPHDLVGLQLTSRVRSQGGLRRDDIVPLVASWAPHQCFRTLLGDA 3166
A+NSHAAGSL DLLQSPHDL+GLQLTSRVRSQGGL RDD+VPLV S AP Q FRTLLGD
Sbjct: 637 AANSHAAGSLRDLLQSPHDLIGLQLTSRVRSQGGLSRDDVVPLVTSRAPQQRFRTLLGDT 458
Query: 3165 TDDHGLV*PG*HLL*IGVAMFPGDQIHVPHRYAPAHGKIPE 3043
DD LV*P *HLL*IG+AMFP DQIHVPHR APAH K+PE
Sbjct: 457 PDDDSLV*PR*HLL*IGIAMFPSDQIHVPHR*APAHEKVPE 335
Score = 189 bits (408), Expect(2) = 2e-064
Identities = 81/101 (80%), Positives = 83/101 (82%)
Frame = +3 / +1
Query: 3045 QVSFRALGRICGEHVSDHRGTWRHRSRGDAIRATQDRDRPWRHREGFGSTGEEPRKLQEG 3224
QV FRALG ICGEHVSDH GTWR+RSRGDAI TQD RP HREGFGS EE KLQEG
Sbjct: 337 QVPFRALGPICGEHVSDHWGTWRYRSRGDAIWVTQDCHRPGCHREGFGSAAEELGKLQEG 516
Query: 3225 RCRPV*DPLGCVHDW*AEGRRDHAGSEASLQDFQRHVNLML 3347
R RP *DPLGCVHDW*AEGR DHAGSEA L DFQRHVNL+L
Sbjct: 517 RRRPD*DPLGCVHDW*AEGR*DHAGSEAGL*DFQRHVNLLL 639
Score = 187 bits (403), Expect(2) = 4e-060
Identities = 83/101 (82%), Positives = 85/101 (84%)
Frame = +2 / +3
Query: 3044 SGIFPCAGAYLWGTCI*SPGNMATPI*RRCYPGYTRP*SSVASPRRVRKHW*GAQEATRG 3223
SG F CAGAYLWGTCI*S GNMA PI*RRCY GYTR SS SPRRVRK *GA+E TRG
Sbjct: 336 SGTFSCAGAYLWGTCI*SLGNMAIPI*RRCYLGYTRLSSSGVSPRRVRKRC*GAREVTRG 515
Query: 3224 TMSSRLRPPWLRTRLVS*RPTRSCGL*SKSPRLPAACEFDA 3346
T SSRLRPPWLRTRLVS*RP RSCGL*S+S RLPAACEF A
Sbjct: 516 TTSSRLRPPWLRTRLVS*RPMRSCGL*SRSLRLPAACEFAA 638
Score = 185 bits (398), Expect(2) = 8e-059
Identities = 80/101 (79%), Positives = 85/101 (84%)
Frame = -2 / -1
Query: 3346 SIKFTCRWKSWRLASEPA*SRRPSAHQSCTQPRGSQTGRHRPSCSFLGSSPVLPNPSR*R 3167
S KFTCRWKS R ASEPA*S RPSAHQSCTQPRGSQ+GR RPSC+F SS LPNPSR*
Sbjct: 638 SSKFTCRWKS*RPASEPA*SHRPSAHQSCTQPRGSQSGRRRPSCNFPSSSAALPNPSR*H 459
Query: 3166 HGRSRSCVARIASPLDRCRHVPR*SDTCSPQIRPSARKDT* 3044
GR +SCV +IASPLDR RHVP+*SDTCSPQI PSARK T*
Sbjct: 458 PGR*QSCVTQIASPLDRYRHVPQ*SDTCSPQIGPSARKGT* 336
Score = 101 bits (215), Expect(2) = 5e-071
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = -3 / -3
Query: 3051 IPECL*P*C*QRDNLKPCRVPAVHDVAAETTHPQPLPHLIDRFHLL 2914
+PECL*P*C*Q DNLK CRVPAVHDVA ETTHPQPL HLIDRFHL+
Sbjct: 228 LPECL*P*C*QGDNLKSCRVPAVHDVAPETTHPQPLSHLIDRFHLI 91
Score = 94.5 bits (200), Expect(2) = 3e-078
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = +3 / +3
Query: 2919 GENGR*DEGAAEDAWSPLPHHVLQELDKASGCPSASIKVTGTQV 3050
GENGR*DE AEDAWSP+PHHVLQE DK SGCP ASIKVTGTQV
Sbjct: 96 GENGR*DEREAEDAWSPVPHHVLQERDKTSGCPPASIKVTGTQV 227
Score = 80.3 bits (169), Expect(2) = 2e-064
Identities = 34/39 (87%), Positives = 34/39 (87%)
Frame = +2 / +2
Query: 2933 MR*GSG*GCVVSAATSCTAGTRQGFRLSLC*HQGHRHSG 3049
MR* G*GCVVS ATSCTAGTRQ FRLS C*HQGHRHSG
Sbjct: 110 MR*ERG*GCVVSGATSCTAGTRQDFRLSPC*HQGHRHSG 226
Score = 74.4 bits (156), Expect(4) = 4e-026
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = -1 / -3
Query: 3347 KHQIHMPLEVLETCFRARMISSAFSSPVVYAAK 3249
+ QIHMPLEVLETCFRARMISSAFSSPVVYAAK
Sbjct: 639 QQQIHMPLEVLETCFRARMISSAFSSPVVYAAK 541
Score = 68.4 bits (143), Expect(2) = 4e-060
Identities = 30/43 (69%), Positives = 31/43 (72%)
Frame = +1 / +1
Query: 2920 VKTVDXXXXXXXXXXXXCHIMYCRNSTRLQVVPLLASRSQALR 3048
VKTVD CHIMYCRN+TRLQVVPLLASRSQALR
Sbjct: 97 VKTVDEMRERLRMRGLRCHIMYCRNATRLQVVPLLASRSQALR 225
Score = 66.1 bits (138), Expect(2) = 8e-059
Identities = 30/44 (68%), Positives = 30/44 (68%)
Frame = -1 / -1
Query: 3050 YLSACDLDASRGTT*SLVEFLQYMMWQXXXXXXXXXXXXSTVFT 2919
YLSACDLDASRGTT*SLV FLQYMMW STVFT
Sbjct: 227 YLSACDLDASRGTT*SLVAFLQYMMWHRRPRILSLSLISSTVFT 96
Score = 36.8 bits (74), Expect(4) = 4e-026
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / -3
Query: 3089 YMFPTDTPQRTERYL 3045
YMFPTD PQRT+RYL
Sbjct: 381 YMFPTDRPQRTKRYL 337
Score = 34.1 bits (68), Expect(4) = 4e-026
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2 / -2
Query: 3049 T*VPVTLMLAEGQPEAL 2999
T*VPVTLMLA GQPE L
Sbjct: 226 T*VPVTLMLAGGQPEVL 176
Score = 31.3 bits (62), Expect(4) = 4e-026
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -1 / -3
Query: 3185 EPFSVTPRTITVL 3147
EPFSVTPRT+TVL
Sbjct: 477 EPFSVTPRTMTVL 439
>gb|BG054057.1|BG054057 OV2_1_H05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 585
Score = 279 bits (604), Expect(3) = 5e-077
Identities = 119/131 (90%), Positives = 126/131 (96%)
Frame = +1 / +2
Query: 2971 CHIMYCRNSTRLQVVPLLASRSQALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHK 3150
CHIMYCRN+TRLQVVPLLASRSQALRYL VRWG+SVGNMYLITGEHGDTDLEEMLSGLHK
Sbjct: 26 CHIMYCRNATRLQVVPLLASRSQALRYLFVRWGLSVGNMYLITGEHGDTDLEEMLSGLHK 205
Query: 3151 TVIVRGVTEKGSEALVRSPGSYKRDDVVPSETPLAAYTTGELKADEIMRALKQVSKTSSG 3330
TVIVRGVTEKGSEAL+RS GSYKRDDVVP+ETPLAAYTTGELKADEIMRALKQVSKTSSG
Sbjct: 206 TVIVRGVTEKGSEALLRSSGSYKRDDVVPTETPLAAYTTGELKADEIMRALKQVSKTSSG 385
Query: 3331 M*I*CFFYILS 3363
M*I C+ ++S
Sbjct: 386 M*ICCWVRLIS 418
Score = 260 bits (562), Expect(2) = 3e-069
Identities = 109/133 (81%), Positives = 112/133 (84%)
Frame = +3 / +1
Query: 2949 AEDAWSPLPHHVLQELDKASGCPSASIKVTGTQVSFRALGRICGEHVSDHRGTWRHRSRG 3128
AEDAWSP+PHHVLQE DK SGCP ASIKVTGTQV FRALG ICGEHVSDH GTWR+RSRG
Sbjct: 4 AEDAWSPVPHHVLQERDKTSGCPPASIKVTGTQVPFRALGPICGEHVSDHWGTWRYRSRG 183
Query: 3129 DAIRATQDRDRPWRHREGFGSTGEEPRKLQEGRCRPV*DPLGCVHDW*AEGRRDHAGSEA 3308
DAI TQD RP HREGFGS EE KLQEGR RP *DPLGCVHDW*AEGR DHAGSEA
Sbjct: 184 DAIWVTQDCHRPGCHREGFGSAAEELGKLQEGRRRPD*DPLGCVHDW*AEGR*DHAGSEA 363
Query: 3309 SLQDFQRHVNLML 3347
L DFQRHVNL+L
Sbjct: 364 GL*DFQRHVNLLL 402
Score = 259 bits (561), Expect(3) = 1e-071
Identities = 111/133 (83%), Positives = 116/133 (87%)
Frame = -3 / -3
Query: 3345 ASNSHAAGSLGDLLQSPHDLVGLQLTSRVRSQGGLRRDDIVPLVASWAPHQCFRTLLGDA 3166
A+NSHAAGSL DLLQSPHDL+GLQLTSRVRSQGGL RDD+VPLV S AP Q FRTLLGD
Sbjct: 400 AANSHAAGSLRDLLQSPHDLIGLQLTSRVRSQGGLSRDDVVPLVTSRAPQQRFRTLLGDT 221
Query: 3165 TDDHGLV*PG*HLL*IGVAMFPGDQIHVPHRYAPAHGKIPECL*P*C*QRDNLKPCRVPA 2986
DD LV*P *HLL*IG+AMFP DQIHVPHR APAH K+PECL*P*C*Q DNLK CRVPA
Sbjct: 220 PDDDSLV*PR*HLL*IGIAMFPSDQIHVPHR*APAHEKVPECL*P*C*QGDNLKSCRVPA 41
Query: 2985 VHDVAAETTHPQP 2947
VHDVA ETTHPQP
Sbjct: 40 VHDVAPETTHPQP 2
Score = 256 bits (554), Expect = 1e-066
Identities = 112/133 (84%), Positives = 114/133 (85%)
Frame = +2 / +3
Query: 2948 G*GCVVSAATSCTAGTRQGFRLSLC*HQGHRHSGIFPCAGAYLWGTCI*SPGNMATPI*R 3127
G*GCVVS ATSCTAGTRQ FRLS C*HQGHRHSG F CAGAYLWGTCI*S GNMA PI*R
Sbjct: 3 G*GCVVSGATSCTAGTRQDFRLSPC*HQGHRHSGTFSCAGAYLWGTCI*SLGNMAIPI*R 182
Query: 3128 RCYPGYTRP*SSVASPRRVRKHW*GAQEATRGTMSSRLRPPWLRTRLVS*RPTRSCGL*S 3307
RCY GYTR SS SPRRVRK *GA+E TRGT SSRLRPPWLRTRLVS*RP RSCGL*S
Sbjct: 183 RCYLGYTRLSSSGVSPRRVRKRC*GAREVTRGTTSSRLRPPWLRTRLVS*RPMRSCGL*S 362
Query: 3308 KSPRLPAACEFDA 3346
+S RLPAACEF A
Sbjct: 363 RSLRLPAACEFAA 401
Score = 213 bits (460), Expect(2) = 1e-056
Identities = 93/116 (80%), Positives = 98/116 (84%)
Frame = -2 / -2
Query: 3346 SIKFTCRWKSWRLASEPA*SRRPSAHQSCTQPRGSQTGRHRPSCSFLGSSPVLPNPSR*R 3167
S KFTCRWKS R ASEPA*S RPSAHQSCTQPRGSQ+GR RPSC+F SS LPNPSR*
Sbjct: 401 SSKFTCRWKS*RPASEPA*SHRPSAHQSCTQPRGSQSGRRRPSCNFPSSSAALPNPSR*H 222
Query: 3166 HGRSRSCVARIASPLDRCRHVPR*SDTCSPQIRPSARKDT*VPVTLMLAEGQPEAL 2999
GR +SCV +IASPLDR RHVP+*SDTCSPQI PSARK T*VPVTLMLA GQPE L
Sbjct: 221 PGR*QSCVTQIASPLDRYRHVPQ*SDTCSPQIGPSARKGT*VPVTLMLAGGQPEVL 54
Score = 90.4 bits (191), Expect(4) = 1e-039
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = -1 / -1
Query: 3089 YMFPTDTPQRTERYLSACDLDASRGTT*SLVEFLQYMMW 2973
YMFPTD PQRT+RYLSACDLDASRGTT*SLV FLQYMMW
Sbjct: 144 YMFPTDRPQRTKRYLSACDLDASRGTT*SLVAFLQYMMW 28
Score = 74.4 bits (156), Expect(4) = 1e-039
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = -1 / -1
Query: 3347 KHQIHMPLEVLETCFRARMISSAFSSPVVYAAK 3249
+ QIHMPLEVLETCFRARMISSAFSSPVVYAAK
Sbjct: 402 QQQIHMPLEVLETCFRARMISSAFSSPVVYAAK 304
Score = 31.3 bits (62), Expect(4) = 1e-039
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -1 / -1
Query: 3185 EPFSVTPRTITVL 3147
EPFSVTPRT+TVL
Sbjct: 240 EPFSVTPRTMTVL 202
Score = 30.4 bits (60), Expect(2) = 1e-056
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2 / -3
Query: 3448 VSCFICHCNIYIHTRGTVHNLFYIAVKKR 3362
+S + C+ I+TRGTVH LF + +++
Sbjct: 556 ISSVLVICHCNIYTRGTVHKLFMCSSEEK 470
Score = 29.5 bits (58), Expect(3) = 5e-077
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 3385 ISCEQYRGCVY 3417
I CEQYRGC+Y
Sbjct: 493 IICEQYRGCIY 525
Score = 29.0 bits (57), Expect(3) = 1e-071
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -2
Query: 3416 YTHPRYCSQLI 3384
Y HPRYCSQ+I
Sbjct: 524 YIHPRYCSQII 492
Score = 27.2 bits (53), Expect(4) = 1e-039
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -1
Query: 3417 IYTPAVLFTTY 3385
IYTPAVLFT Y
Sbjct: 525 IYTPAVLFTNY 493
Score = 25.8 bits (50), Expect(2) = 3e-069
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +2
Query: 3383 K*VVNSTAGVYIYI 3424
K* VNSTAGVYI +
Sbjct: 491 K*FVNSTAGVYIAV 532
Score = 24.4 bits (47), Expect(3) = 1e-071
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -3
Query: 3436 ICHCNIY 3416
ICHCNIY
Sbjct: 538 ICHCNIY 518
Score = 22.1 bits (42), Expect(3) = 5e-077
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2 / +1
Query: 3443 GHC*LYW 3463
GHC* YW
Sbjct: 544 GHC*FYW 564
>gb|BG462954.1|BG462954 EM1_46_F12.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 576
Score = 275 bits (594), Expect(2) = 7e-075
Identities = 112/168 (66%), Positives = 136/168 (80%)
Frame = +1 / +1
Query: 853 AGSNDGEGMGESGGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 1032
+G N + GE+ GAYI+R+P GP+DKYL KE LWP++QEFVDGAL+HI+ MSKA+GE+
Sbjct: 73 SGKNSKQEKGENSGAYIIRLPFGPKDKYLAKEHLWPFIQEFVDGALSHIVRMSKAIGEET 252
Query: 1033 GNGRPVLPYVIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSKEEID 1212
G PV P VIHGHYA AG AALLSGALN+PM TGH LG++KLE LLKQGR ++E+I+
Sbjct: 253 GRVHPVWPAVIHGHYASAGIAAALLSGALNLPMAFTGHFLGKDKLEGLLKQGRQTREQIN 432
Query: 1213 STYKIMRRIEGEELALDASELVITSTRQEIDEQWGLYDGFDVKLEKVL 1356
TYKIM RIE EEL+LDASE+VI STRQEI+EQW LYDGF+V L + L
Sbjct: 433 MTYKIMCRIEAEELSLDASEIVIASTRQEIEEQWNLYDGFEVILARKL 576
Score = 29.9 bits (59), Expect(2) = 7e-075
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1 / +1
Query: 790 TRQVSSLDVDWSYGEPTEMLCAGS 861
TRQ+ + + D SYGEP E+L + S
Sbjct: 4 TRQILAPNFDRSYGEPAELLVSTS 75
>gb|BG411201.1|BG411201 EM1_26_H05.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 512
Score = 204 bits (439), Expect(2) = 1e-070
Identities = 84/111 (75%), Positives = 95/111 (85%)
Frame = +1 / +3
Query: 1504 EGASPKSMPPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTL 1683
E S PPIWA++MRF +NP KPMILAL+RPDPKKNITTLVKAFGE R LR LANLTL
Sbjct: 180 EDGSGSPDPPIWADIMRFFSNPRKPMILALARPDPKKNITTLVKAFGEHRELRNLANLTL 359
Query: 1684 IMGNRDDIDDMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYR 1836
IMGNRD ID+MS+ NA+VLT+VLKLIDKYDLYG VA+PKHH Q +VP+IYR
Sbjct: 360 IMGNRDVIDEMSSTNAAVLTSVLKLIDKYDLYGQVAYPKHHKQFEVPDIYR 512
Score = 147 bits (316), Expect(2) = 1e-042
Identities = 71/103 (68%), Positives = 78/103 (75%)
Frame = -1 / -2
Query: 1835 R*ISGTSA*L*CLGNATLPYRSYLSISFRTVVRTLALPADMSSMSSLLPMIRVRFASSLS 1656
R*ISGTS L CLG AT PYRSYLSI+ T V+T A D+SSM+S LPMI VRFA LS
Sbjct: 511 R*ISGTSNCLWCLGYATCPYRSYLSINLSTEVKTAAFVLDISSMTSRLPMISVRFAKFLS 332
Query: 1655 GRHSPNALTRVVMFFFGSGLDNARIIGL*GLVRNRITSAQIGG 1527
R SPNALTRVV+FFFGSG ARI+GL G +NRI SAQIGG
Sbjct: 331 SRCSPNALTRVVIFFFGSGRARARIMGLRGFEKNRIISAQIGG 203
Score = 87.2 bits (184), Expect(2) = 1e-070
Identities = 31/48 (64%), Positives = 40/48 (83%)
Frame = +1 / +3
Query: 1315 GLYDGFDVKLEKVLRARARRGVSCHGRYMPRMVVIPPGMDFSNVVVHE 1458
GLYDGFD+ + + LRAR +RGVSC GRYMPRM+ IPPGM+FS++ H+
Sbjct: 9 GLYDGFDLTMARKLRARIKRGVSCFGRYMPRMIAIPPGMEFSHIAPHD 152
Score = 49.6 bits (102), Expect(2) = 1e-042
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = -1 / -2
Query: 1424 GGITTILGM*RPWQLTPRLARALSTFSSLTSNPSYNP 1314
GGI I GM*RP QLTPR ALS + + S PSYNP
Sbjct: 118 GGIAIIRGM*RPKQLTPRFILALSFRAIVRSKPSYNP 8
>gb|BG488317.1|BG488317 RHIZ2_62_B04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 467
Score = 233 bits (503), Expect(2) = 2e-069
Identities = 93/126 (73%), Positives = 109/126 (86%)
Frame = +1 / +1
Query: 853 AGSNDGEGMGESGGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 1032
+ N G +GES GAYIVRIP GPRDKY+ KE LWP++QEFVDGAL HI+ MSK LGEQ+
Sbjct: 88 SSENFGHELGESSGAYIVRIPFGPRDKYIPKEHLWPHIQEFVDGALVHIMQMSKVLGEQI 267
Query: 1033 GNGRPVLPYVIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSKEEID 1212
G+G+PV P VIHGHYADAGD AALLSGALNVPMV TGHSLGR+KLEQ+LKQGR +++EI+
Sbjct: 268 GSGQPVWPVVIHGHYADAGDSAALLSGALNVPMVFTGHSLGRDKLEQILKQGRQTRDEIN 447
Query: 1213 STYKIM 1230
+TYKIM
Sbjct: 448 ATYKIM 465
Score = 107 bits (228), Expect = 1e-021
Identities = 43/111 (38%), Positives = 56/111 (50%)
Frame = +3 / +3
Query: 897 LHCAHTVWAAG*IPQEGSVVALPPRVCRWSPCAYPEHVQGSGRAGWKWEASTALRDTWAL 1076
L+C T+W I + +A P + W C Y VQGS R W W S A TW L
Sbjct: 132 LYCPDTIWTKRQIYP*RASMASHPGIR*WRTCPYHADVQGSWRTNW*WATSMACCYTWTL 311
Query: 1077 CRCWRCCCSPFWCAECANGAHWPLTWEEQAGTTAEARAHVQGGDRFDIQDH 1229
C CW CC W EC +G HW +W+ Q G EARA QG ++ ++ D+
Sbjct: 312 C*CW*FCCFTVWGTECTHGIHWSFSWQRQVGADFEARASNQG*NKCNL*DN 464
Score = 53.8 bits (111), Expect(2) = 2e-069
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +1 / +1
Query: 775 RVDLFTRQVSSLDVDWSYGEPTEMLCAGSNDGEG 876
R DL TRQ+S+ DVDWSYGEPTEML S++ G
Sbjct: 4 RGDLLTRQISAPDVDWSYGEPTEMLSPISSENFG 105
>gb|BE365858.1|BE365858 PI1_2_D09.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA, mRNA
sequence
Length = 538
Score = 234 bits (505), Expect(2) = 5e-067
Identities = 97/139 (69%), Positives = 115/139 (82%)
Frame = +1 / +2
Query: 943 KEALWPYLQEFVDGALAHILNMSKALGEQVGNGRPVLPYVIHGHYADAGDVAALLSGALN 1122
KE LWP++QEFVDGAL+HI+ MSKA+GE+ G PV P VIHGHYA AG AALLSGALN
Sbjct: 122 KEHLWPFIQEFVDGALSHIVRMSKAIGEETGRVHPVWPAVIHGHYASAGIAAALLSGALN 301
Query: 1123 VPMVLTGHSLGRNKLEQLLKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEI 1302
+PM TGH LG++KLE LLKQGR ++E+I+ TYKIM RIE EEL+LDASE+VI STRQEI
Sbjct: 302 LPMAFTGHFLGKDKLEGLLKQGRQTREQINMTYKIMCRIEAEELSLDASEIVIASTRQEI 481
Query: 1303 DEQWGLYDGFDVKLEKVLR 1359
+EQW LYDGF+V L + LR
Sbjct: 482 EEQWNLYDGFEVILARKLR 538
Score = 44.6 bits (91), Expect(2) = 5e-067
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1 / +1
Query: 853 AGSNDGEGMGESGGAYIVRIPCGPRDKY 936
+G N + GE+ GAYI+R+P GP+DKY
Sbjct: 31 SGKNSKQEKGENSGAYIIRLPFGPKDKY 114
>gb|BG462896.1|BG462896 EM1_46_A04.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 522
Score = 253 bits (547), Expect = 1e-065
Identities = 101/153 (66%), Positives = 127/153 (83%)
Frame = +1 / +1
Query: 991 AHILNMSKALGEQVGNGRPVLPYVIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLE 1170
+HI+ MSKA+GE+ G PV P VIHGHYA AG AALLSGALN+PM TGH LG++KLE
Sbjct: 10 SHIVRMSKAIGEETGRVHPVWPAVIHGHYASAGIAAALLSGALNLPMAFTGHFLGKDKLE 189
Query: 1171 QLLKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEIDEQWGLYDGFDVKLEK 1350
LLKQGR ++E+I+ TYKIM RIE EEL+LDASE+VI STRQEI+EQW LYDGF+V L +
Sbjct: 190 GLLKQGRQTREQINMTYKIMCRIEAEELSLDASEIVIASTRQEIEEQWNLYDGFEVILAR 369
Query: 1351 VLRARARRGVSCHGRYMPRMVVIPPGMDFSNVV 1449
LRAR +RG +C+GR+MPRMV+IPPG++F +++
Sbjct: 370 KLRARVKRGANCYGRFMPRMVIIPPGVEFGHII 468
>gb|CF070625.1|CF070625 FE1_1_C02.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA clone
FE1_1_C02_A002 5', mRNA sequence
Length = 529
Score = 252 bits (544), Expect = 3e-065
Identities = 103/155 (66%), Positives = 127/155 (81%)
Frame = +1 / +1
Query: 985 ALAHILNMSKALGEQVGNGRPVLPYVIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNK 1164
ALAHI+ MS +G++ G+ PV P VIHGHY+ AG AALLSGALNVPMV TGH LG++K
Sbjct: 1 ALAHIVRMS*TIGKETGSVCPVWPAVIHGHYSSAGVAAALLSGALNVPMVFTGHFLGKDK 180
Query: 1165 LEQLLKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEIDEQWGLYDGFDVKL 1344
LE LLKQGR ++E+I+ TYKIMRRIE EEL+LDASE+VI STRQEI+EQW LYDGF+V L
Sbjct: 181 LEGLLKQGRQTREQINVTYKIMRRIEAEELSLDASEIVIASTRQEIEEQWNLYDGFEVML 360
Query: 1345 EKVLRARARRGVSCHGRYMPRMVVIPPGMDFSNVV 1449
+ LRA +RG C+GRYMPRMV+IPPG++F ++
Sbjct: 361 ARKLRALVKRGAHCYGRYMPRMVIIPPGVEFGQLI 465
>gb|CW190601.1|CW190601 104_612_11174591_148_36758_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11174591, DNA
sequence
Length = 625
Score = 221 bits (478), Expect(3) = 2e-064
Identities = 95/106 (89%), Positives = 101/106 (95%)
Frame = +1 / +1
Query: 3046 RYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEALVRSPGSYKRD 3225
RYL VRWG+SVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEAL+RS GSYKRD
Sbjct: 157 RYLFVRWGLSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEALLRSSGSYKRD 336
Query: 3226 DVVPSETPLAAYTTGELKADEIMRALKQVSKTSSGM*I*CFFYILS 3363
DVVP+ETPLAAYTTGELKADEIMRALKQVSKTSSGM*I C+ ++S
Sbjct: 337 DVVPTETPLAAYTTGELKADEIMRALKQVSKTSSGM*ICCWVRLIS 474
Score = 190 bits (410), Expect(3) = 8e-055
Identities = 82/101 (81%), Positives = 87/101 (86%)
Frame = -3 / -2
Query: 3345 ASNSHAAGSLGDLLQSPHDLVGLQLTSRVRSQGGLRRDDIVPLVASWAPHQCFRTLLGDA 3166
A+NSHAAGSL DLLQSPHDL+GLQLTSRVRSQGGL RDD+VPLV S AP Q FRTLLGD
Sbjct: 456 AANSHAAGSLRDLLQSPHDLIGLQLTSRVRSQGGLSRDDVVPLVTSRAPQQRFRTLLGDT 277
Query: 3165 TDDHGLV*PG*HLL*IGVAMFPGDQIHVPHRYAPAHGKIPE 3043
DD LV*P *HLL*IG+AMFP DQIHVPHR APAH K+PE
Sbjct: 276 PDDDSLV*PR*HLL*IGIAMFPSDQIHVPHR*APAHEKVPE 154
Score = 189 bits (408), Expect(3) = 3e-053
Identities = 81/101 (80%), Positives = 83/101 (82%)
Frame = +3 / +3
Query: 3045 QVSFRALGRICGEHVSDHRGTWRHRSRGDAIRATQDRDRPWRHREGFGSTGEEPRKLQEG 3224
QV FRALG ICGEHVSDH GTWR+RSRGDAI TQD RP HREGFGS EE KLQEG
Sbjct: 156 QVPFRALGPICGEHVSDHWGTWRYRSRGDAIWVTQDCHRPGCHREGFGSAAEELGKLQEG 335
Query: 3225 RCRPV*DPLGCVHDW*AEGRRDHAGSEASLQDFQRHVNLML 3347
R RP *DPLGCVHDW*AEGR DHAGSEA L DFQRHVNL+L
Sbjct: 336 RRRPD*DPLGCVHDW*AEGR*DHAGSEAGL*DFQRHVNLLL 458
Score = 187 bits (403), Expect(2) = 3e-049
Identities = 83/101 (82%), Positives = 85/101 (84%)
Frame = +2 / +2
Query: 3044 SGIFPCAGAYLWGTCI*SPGNMATPI*RRCYPGYTRP*SSVASPRRVRKHW*GAQEATRG 3223
SG F CAGAYLWGTCI*S GNMA PI*RRCY GYTR SS SPRRVRK *GA+E TRG
Sbjct: 155 SGTFSCAGAYLWGTCI*SLGNMAIPI*RRCYLGYTRLSSSGVSPRRVRKRC*GAREVTRG 334
Query: 3224 TMSSRLRPPWLRTRLVS*RPTRSCGL*SKSPRLPAACEFDA 3346
T SSRLRPPWLRTRLVS*RP RSCGL*S+S RLPAACEF A
Sbjct: 335 TTSSRLRPPWLRTRLVS*RPMRSCGL*SRSLRLPAACEFAA 457
Score = 185 bits (398), Expect(3) = 2e-051
Identities = 80/101 (79%), Positives = 85/101 (84%)
Frame = -2 / -1
Query: 3346 SIKFTCRWKSWRLASEPA*SRRPSAHQSCTQPRGSQTGRHRPSCSFLGSSPVLPNPSR*R 3167
S KFTCRWKS R ASEPA*S RPSAHQSCTQPRGSQ+GR RPSC+F SS LPNPSR*
Sbjct: 457 SSKFTCRWKS*RPASEPA*SHRPSAHQSCTQPRGSQSGRRRPSCNFPSSSAALPNPSR*H 278
Query: 3166 HGRSRSCVARIASPLDRCRHVPR*SDTCSPQIRPSARKDT* 3044
GR +SCV +IASPLDR RHVP+*SDTCSPQI PSARK T*
Sbjct: 277 PGR*QSCVTQIASPLDRYRHVPQ*SDTCSPQIGPSARKGT* 155
Score = 74.4 bits (156), Expect(5) = 4e-028
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = -1 / -3
Query: 3347 KHQIHMPLEVLETCFRARMISSAFSSPVVYAAK 3249
+ QIHMPLEVLETCFRARMISSAFSSPVVYAAK
Sbjct: 458 QQQIHMPLEVLETCFRARMISSAFSSPVVYAAK 360
Score = 37.7 bits (76), Expect(3) = 2e-064
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2 / +1
Query: 3005 FRLSLC*HQGHRHSG 3049
FRLS C*HQGHRHSG
Sbjct: 1 FRLSPC*HQGHRHSG 45
Score = 36.8 bits (74), Expect(3) = 8e-055
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1 / -1
Query: 3050 YLSACDLDASRGTT* 3006
YLSACDLDASRGTT*
Sbjct: 46 YLSACDLDASRGTT* 2
Score = 36.8 bits (74), Expect(5) = 4e-028
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / -3
Query: 3089 YMFPTDTPQRTERYL 3045
YMFPTD PQRT+RYL
Sbjct: 200 YMFPTDRPQRTKRYL 156
Score = 35.4 bits (71), Expect(3) = 3e-053
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3 / +2
Query: 3006 SGCPSASIKVTGTQV 3050
SGCP ASIKVTGTQV
Sbjct: 2 SGCPPASIKVTGTQV 46
Score = 32.7 bits (65), Expect(3) = 2e-051
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -3 / -3
Query: 3051 IPECL*P*C*QRDNL 3007
+PECL*P*C*Q DNL
Sbjct: 47 LPECL*P*C*QGDNL 3
Score = 32.2 bits (64), Expect(5) = 4e-028
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -2 / -2
Query: 3049 T*VPVTLMLAEGQPE 3005
T*VPVTLMLA GQPE
Sbjct: 45 T*VPVTLMLAGGQPE 1
Score = 31.8 bits (63), Expect(2) = 3e-049
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1 / +3
Query: 3007 QVVPLLASRSQALR 3048
QVVPLLASRSQALR
Sbjct: 3 QVVPLLASRSQALR 44
Score = 31.3 bits (62), Expect(5) = 4e-028
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -1 / -3
Query: 3185 EPFSVTPRTITVL 3147
EPFSVTPRT+TVL
Sbjct: 296 EPFSVTPRTMTVL 258
Score = 29.5 bits (58), Expect(3) = 2e-064
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 3385 ISCEQYRGCVY 3417
I CEQYRGC+Y
Sbjct: 549 IICEQYRGCIY 581
Score = 29.0 bits (57), Expect(3) = 8e-055
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -1
Query: 3416 YTHPRYCSQLI 3384
Y HPRYCSQ+I
Sbjct: 580 YIHPRYCSQII 548
Score = 27.2 bits (53), Expect(3) = 2e-051
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -3
Query: 3417 IYTPAVLFTTY 3385
IYTPAVLFT Y
Sbjct: 581 IYTPAVLFTNY 549
Score = 25.8 bits (50), Expect(3) = 3e-053
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +1
Query: 3383 K*VVNSTAGVYIYI 3424
K* VNSTAGVYI +
Sbjct: 547 K*FVNSTAGVYIAV 588
Score = 25.8 bits (50), Expect(5) = 4e-028
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2 / -2
Query: 3415 IHTRGTVHNLFYIAVKKR 3362
I+TRGTVH LF + +++
Sbjct: 579 IYTRGTVHKLFMCSSEEK 526
>gb|CW057648.1|CW057648 104_299_10518335_115_30171 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518335, DNA
sequence
Length = 574
Score = 172 bits (370), Expect(3) = 3e-064
Identities = 68/108 (62%), Positives = 85/108 (78%)
Frame = +1 / +2
Query: 709 TGGQVKYVVELARAMSMMPGVYRVDLFTRQVSSLDVDWSYGEPTEMLCAGSNDGEGMGES 888
T QVKYVVELARA++ GV+RVDL TRQ+S DVDW+YGEP EM+ D +G
Sbjct: 35 TDVQVKYVVELARALAATAGVHRVDLLTRQISCPDVDWTYGEPVEMITHHHADDGDLGSG 214
Query: 889 GGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 1032
GGAYIVR+PCGPRDKYL KE+LWP++ EFVD ALAH+ N+++ALG+Q+
Sbjct: 215 GGAYIVRLPCGPRDKYLPKESLWPHIPEFVDRALAHVTNVARALGDQL 358
Score = 77.6 bits (163), Expect(3) = 3e-064
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +1 / +3
Query: 1090 DVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSKEEIDSTY 1221
+VAA L+ ALNVPMV+TGHSLGRNKLEQLLK GRM + EI TY
Sbjct: 441 EVAAHLASALNVPMVMTGHSLGRNKLEQLLKLGRMPRAEIQGTY 572
Score = 61.1 bits (127), Expect(3) = 3e-023
Identities = 28/50 (56%), Positives = 33/50 (66%)
Frame = -1 / -2
Query: 845 ISVGSP*LQSTSRDDT*RVKRSTLYTPGIIDIALASSTTYFTWPPVSESR 696
IS GSP*+QSTS + RV RST TP + A ASSTTYFTW V ++
Sbjct: 171 ISTGSP*VQSTSGQEIWRVSRSTRCTPAVAASARASSTTYFTWTSVKRTK 22
Score = 55.1 bits (114), Expect(3) = 3e-023
Identities = 27/44 (61%), Positives = 27/44 (61%)
Frame = -1 / -2
Query: 1025 SPRALDMFRICARAPSTNSWR*GHNASFLRYLSRGPHGMRTM*A 894
SP A CA A STNS GH S RYLSRGPHG RTM*A
Sbjct: 351 SPSARATLVTCASARSTNSGMCGHRDSLGRYLSRGPHGSRTM*A 220
Score = 38.2 bits (77), Expect(3) = 3e-064
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1 / +2
Query: 1033 GNGRPVLPYVIHGHYADA 1086
G+ PV PYVIHGHYADA
Sbjct: 383 GSPPPVWPYVIHGHYADA 436
Score = 33.6 bits (67), Expect(3) = 3e-023
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2 / -2
Query: 1192 CALASAVVPACSSQVSGQ*APLAHSAHQKG 1103
C ASA PACS+ SG +P A SA G
Sbjct: 543 CGPASAAAPACSAPGSGPSSPWARSARSPG 454
>gb|CW057647.1|CW057647 104_299_10518335_114_30169 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518335, DNA
sequence
Length = 652
Score = 154 bits (330), Expect(2) = 3e-063
Identities = 63/77 (81%), Positives = 69/77 (89%)
Frame = +1 / -2
Query: 1678 TLIMGNRDDIDDMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKG 1857
TLI+GNRDDI++MS G A+VLT VLKLID+YDLYG VA+PKHH Q DVP IYRLAAK KG
Sbjct: 336 TLILGNRDDIEEMSGGAATVLTAVLKLIDRYDLYGCVAYPKHHKQTDVPHIYRLAAKTKG 157
Query: 1858 VFINPALVEPFGLTLIE 1908
VFINPALVEPFGLTLIE
Sbjct: 156 VFINPALVEPFGLTLIE 106
Score = 111 bits (238), Expect(2) = 3e-063
Identities = 43/59 (72%), Positives = 51/59 (86%)
Frame = +1 / -1
Query: 1501 LEGASPKSMPPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANL 1677
+ +S K +PPIW+EV+RF NPHKPMILALSRPDPKKN+TTL+KA+GE R LRELANL
Sbjct: 598 ISSSSKKPLPPIWSEVLRFFANPHKPMILALSRPDPKKNVTTLLKAYGESRHLRELANL 422
Score = 106 bits (227), Expect(2) = 7e-037
Identities = 52/77 (67%), Positives = 57/77 (74%)
Frame = -1 / +2
Query: 1907 SIRVRPNGSTRAGLMKTPFILAARR*ISGTSA*L*CLGNATLPYRSYLSISFRTVVRTLA 1728
SIRVRPNGST AGLM TP +LAARR*+ GTS L CLG AT P RS S+S T VRT+A
Sbjct: 107 SIRVRPNGSTSAGLMNTPLVLAARR*MCGTSVCLWCLG*ATQP*RS*RSMSLSTAVRTVA 286
Query: 1727 LPADMSSMSSLLPMIRV 1677
P D+SSMSSL P I V
Sbjct: 287 APPDISSMSSLFPSISV 337
Score = 71.2 bits (149), Expect(2) = 7e-037
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = -1 / +3
Query: 1688 MIRVRFASSLSGRHSPNALTRVVMFFFGSGLDNARIIGL*GLVRNRITSAQIGG 1527
++ RFASS R SP AL+ VV FFFGSGLD+ARI+GL GL +N TS Q+GG
Sbjct: 411 LVLTRFASSRRWRLSP*ALSSVVTFFFGSGLDSARIMGLCGLAKNLSTSDQMGG 572
>gb|BF655583.1|BF655583 FM1_45_G09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 433
Score = 167 bits (360), Expect(2) = 3e-060
Identities = 67/92 (72%), Positives = 79/92 (85%)
Frame = +1 / +3
Query: 601 LTVWSDDNKEKKLYIVLISVHGLVRGENMELGRDSDTGGQVKYVVELARAMSMMPGVYRV 780
+ W++ +K+KKLYIVLIS+HGL+RGENMELGRDSDTGGQVKYVVELARA+ PGVYRV
Sbjct: 27 IETWANQHKDKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSTPGVYRV 206
Query: 781 DLFTRQVSSLDVDWSYGEPTEMLCAGSNDGEG 876
DL TRQ+S+ DVDWSYGEPTEML S++ G
Sbjct: 207 DLLTRQISAPDVDWSYGEPTEMLSPISSENFG 302
Score = 101 bits (216), Expect(2) = 4e-029
Identities = 47/62 (75%), Positives = 51/62 (82%)
Frame = -1 / -1
Query: 848 NISVGSP*LQSTSRDDT*RVKRSTLYTPGIIDIALASSTTYFTWPPVSESRPSSMFSPRT 669
+ISVGSP*LQSTS + V RSTLYTPG+ ALASSTTYFT PPVSESRPSS+FSPR
Sbjct: 274 SISVGSP*LQSTSGAEICLVSRSTLYTPGVEPKALASSTTYFT*PPVSESRPSSIFSPRI 95
Query: 668 RP 663
RP
Sbjct: 94 RP 89
Score = 88.6 bits (187), Expect(2) = 3e-060
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = +1 / +3
Query: 853 AGSNDGEGMGESGGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHI 999
+ N G +GES GAYIVRIP GPRDKY+ KE LWP++QEFVDGAL HI
Sbjct: 285 SSENFGHELGESSGAYIVRIPFGPRDKYIPKEHLWPHIQEFVDGALVHI 431
Score = 50.1 bits (103), Expect(2) = 4e-029
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = -1 / -1
Query: 998 ICARAPSTNSWR*GHNASFLRYLSRGPHGMRTM*A 894
I APSTNSW *GH S YLS GP+G+RT+*A
Sbjct: 430 IWTSAPSTNSWM*GHRCSLGIYLSLGPNGIRTI*A 326
>gb|CL167258.1|CL167258 104_364_10809943_114_31802_007 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809943, DNA
sequence
Length = 720
Score = 221 bits (478), Expect(3) = 7e-060
Identities = 95/106 (89%), Positives = 101/106 (95%)
Frame = +1 / -1
Query: 3046 RYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEALVRSPGSYKRD 3225
RYL VRWG+SVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEAL+RS GSYKRD
Sbjct: 630 RYLFVRWGLSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEALLRSSGSYKRD 451
Query: 3226 DVVPSETPLAAYTTGELKADEIMRALKQVSKTSSGM*I*CFFYILS 3363
DVVP+ETPLAAYTTGELKADEIMRALKQVSKTSSGM*I C+ ++S
Sbjct: 450 DVVPTETPLAAYTTGELKADEIMRALKQVSKTSSGM*ICCWVRLIS 313
Score = 190 bits (410), Expect(2) = 9e-050
Identities = 82/101 (81%), Positives = 87/101 (86%)
Frame = -3 / +1
Query: 3345 ASNSHAAGSLGDLLQSPHDLVGLQLTSRVRSQGGLRRDDIVPLVASWAPHQCFRTLLGDA 3166
A+NSHAAGSL DLLQSPHDL+GLQLTSRVRSQGGL RDD+VPLV S AP Q FRTLLGD
Sbjct: 331 AANSHAAGSLRDLLQSPHDLIGLQLTSRVRSQGGLSRDDVVPLVTSRAPQQRFRTLLGDT 510
Query: 3165 TDDHGLV*PG*HLL*IGVAMFPGDQIHVPHRYAPAHGKIPE 3043
DD LV*P *HLL*IG+AMFP DQIHVPHR APAH K+PE
Sbjct: 511 PDDDSLV*PR*HLL*IGIAMFPSDQIHVPHR*APAHEKVPE 633
Score = 189 bits (408), Expect(2) = 4e-048
Identities = 81/101 (80%), Positives = 83/101 (82%)
Frame = +3 / -3
Query: 3045 QVSFRALGRICGEHVSDHRGTWRHRSRGDAIRATQDRDRPWRHREGFGSTGEEPRKLQEG 3224
QV FRALG ICGEHVSDH GTWR+RSRGDAI TQD RP HREGFGS EE KLQEG
Sbjct: 631 QVPFRALGPICGEHVSDHWGTWRYRSRGDAIWVTQDCHRPGCHREGFGSAAEELGKLQEG 452
Query: 3225 RCRPV*DPLGCVHDW*AEGRRDHAGSEASLQDFQRHVNLML 3347
R RP *DPLGCVHDW*AEGR DHAGSEA L DFQRHVNL+L
Sbjct: 451 RRRPD*DPLGCVHDW*AEGR*DHAGSEAGL*DFQRHVNLLL 329
Score = 187 bits (403), Expect = 9e-046
Identities = 83/101 (82%), Positives = 85/101 (84%)
Frame = +2 / -2
Query: 3044 SGIFPCAGAYLWGTCI*SPGNMATPI*RRCYPGYTRP*SSVASPRRVRKHW*GAQEATRG 3223
SG F CAGAYLWGTCI*S GNMA PI*RRCY GYTR SS SPRRVRK *GA+E TRG
Sbjct: 632 SGTFSCAGAYLWGTCI*SLGNMAIPI*RRCYLGYTRLSSSGVSPRRVRKRC*GAREVTRG 453
Query: 3224 TMSSRLRPPWLRTRLVS*RPTRSCGL*SKSPRLPAACEFDA 3346
T SSRLRPPWLRTRLVS*RP RSCGL*S+S RLPAACEF A
Sbjct: 452 TTSSRLRPPWLRTRLVS*RPMRSCGL*SRSLRLPAACEFAA 330
Score = 185 bits (398), Expect(2) = 1e-047
Identities = 80/101 (79%), Positives = 85/101 (84%)
Frame = -2 / +3
Query: 3346 SIKFTCRWKSWRLASEPA*SRRPSAHQSCTQPRGSQTGRHRPSCSFLGSSPVLPNPSR*R 3167
S KFTCRWKS R ASEPA*S RPSAHQSCTQPRGSQ+GR RPSC+F SS LPNPSR*
Sbjct: 330 SSKFTCRWKS*RPASEPA*SHRPSAHQSCTQPRGSQSGRRRPSCNFPSSSAALPNPSR*H 509
Query: 3166 HGRSRSCVARIASPLDRCRHVPR*SDTCSPQIRPSARKDT* 3044
GR +SCV +IASPLDR RHVP+*SDTCSPQI PSARK T*
Sbjct: 510 PGR*QSCVTQIASPLDRYRHVPQ*SDTCSPQIGPSARKGT* 632
Score = 74.4 bits (156), Expect(4) = 4e-024
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = -1 / +2
Query: 3347 KHQIHMPLEVLETCFRARMISSAFSSPVVYAAK 3249
+ QIHMPLEVLETCFRARMISSAFSSPVVYAAK
Sbjct: 329 QQQIHMPLEVLETCFRARMISSAFSSPVVYAAK 427
Score = 36.8 bits (74), Expect(4) = 4e-024
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 3089 YMFPTDTPQRTERYL 3045
YMFPTD PQRT+RYL
Sbjct: 587 YMFPTDRPQRTKRYL 631
Score = 31.3 bits (62), Expect(4) = 4e-024
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -1 / +2
Query: 3185 EPFSVTPRTITVL 3147
EPFSVTPRT+TVL
Sbjct: 491 EPFSVTPRTMTVL 529
Score = 30.4 bits (60), Expect(2) = 9e-050
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2 / +1
Query: 3448 VSCFICHCNIYIHTRGTVHNLFYIAVKKR 3362
+S + C+ I+TRGTVH LF + +++
Sbjct: 175 ISSVLVICHCNIYTRGTVHKLFMCSSEEK 261
Score = 29.5 bits (58), Expect(3) = 7e-060
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / -3
Query: 3385 ISCEQYRGCVY 3417
I CEQYRGC+Y
Sbjct: 238 IICEQYRGCIY 206
Score = 29.0 bits (57), Expect(2) = 1e-047
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / +3
Query: 3416 YTHPRYCSQLI 3384
Y HPRYCSQ+I
Sbjct: 207 YIHPRYCSQII 239
Score = 27.2 bits (53), Expect(4) = 4e-024
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +2
Query: 3417 IYTPAVLFTTY 3385
IYTPAVLFT Y
Sbjct: 206 IYTPAVLFTNY 238
Score = 25.8 bits (50), Expect(2) = 4e-048
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / -1
Query: 3383 K*VVNSTAGVYIYI 3424
K* VNSTAGVYI +
Sbjct: 240 K*FVNSTAGVYIAV 199
Score = 22.1 bits (42), Expect(3) = 7e-060
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2 / -3
Query: 3443 GHC*LYW 3463
GHC* YW
Sbjct: 187 GHC*FYW 167
>gb|CW213624.1|CW213624 104_645_11191655_148_37035_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11191655, DNA
sequence
Length = 696
Score = 221 bits (478), Expect(3) = 7e-060
Identities = 95/106 (89%), Positives = 101/106 (95%)
Frame = +1 / -2
Query: 3046 RYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEALVRSPGSYKRD 3225
RYL VRWG+SVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEAL+RS GSYKRD
Sbjct: 572 RYLFVRWGLSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEALLRSSGSYKRD 393
Query: 3226 DVVPSETPLAAYTTGELKADEIMRALKQVSKTSSGM*I*CFFYILS 3363
DVVP+ETPLAAYTTGELKADEIMRALKQVSKTSSGM*I C+ ++S
Sbjct: 392 DVVPTETPLAAYTTGELKADEIMRALKQVSKTSSGM*ICCWVRLIS 255
Score = 190 bits (410), Expect(3) = 4e-051
Identities = 82/101 (81%), Positives = 87/101 (86%)
Frame = -3 / +3
Query: 3345 ASNSHAAGSLGDLLQSPHDLVGLQLTSRVRSQGGLRRDDIVPLVASWAPHQCFRTLLGDA 3166
A+NSHAAGSL DLLQSPHDL+GLQLTSRVRSQGGL RDD+VPLV S AP Q FRTLLGD
Sbjct: 273 AANSHAAGSLRDLLQSPHDLIGLQLTSRVRSQGGLSRDDVVPLVTSRAPQQRFRTLLGDT 452
Query: 3165 TDDHGLV*PG*HLL*IGVAMFPGDQIHVPHRYAPAHGKIPE 3043
DD LV*P *HLL*IG+AMFP DQIHVPHR APAH K+PE
Sbjct: 453 PDDDSLV*PR*HLL*IGIAMFPSDQIHVPHR*APAHEKVPE 575
Score = 189 bits (408), Expect(2) = 4e-048
Identities = 81/101 (80%), Positives = 83/101 (82%)
Frame = +3 / -1
Query: 3045 QVSFRALGRICGEHVSDHRGTWRHRSRGDAIRATQDRDRPWRHREGFGSTGEEPRKLQEG 3224
QV FRALG ICGEHVSDH GTWR+RSRGDAI TQD RP HREGFGS EE KLQEG
Sbjct: 573 QVPFRALGPICGEHVSDHWGTWRYRSRGDAIWVTQDCHRPGCHREGFGSAAEELGKLQEG 394
Query: 3225 RCRPV*DPLGCVHDW*AEGRRDHAGSEASLQDFQRHVNLML 3347
R RP *DPLGCVHDW*AEGR DHAGSEA L DFQRHVNL+L
Sbjct: 393 RRRPD*DPLGCVHDW*AEGR*DHAGSEAGL*DFQRHVNLLL 271
Score = 187 bits (403), Expect = 9e-046
Identities = 83/101 (82%), Positives = 85/101 (84%)
Frame = +2 / -3
Query: 3044 SGIFPCAGAYLWGTCI*SPGNMATPI*RRCYPGYTRP*SSVASPRRVRKHW*GAQEATRG 3223
SG F CAGAYLWGTCI*S GNMA PI*RRCY GYTR SS SPRRVRK *GA+E TRG
Sbjct: 574 SGTFSCAGAYLWGTCI*SLGNMAIPI*RRCYLGYTRLSSSGVSPRRVRKRC*GAREVTRG 395
Query: 3224 TMSSRLRPPWLRTRLVS*RPTRSCGL*SKSPRLPAACEFDA 3346
T SSRLRPPWLRTRLVS*RP RSCGL*S+S RLPAACEF A
Sbjct: 394 TTSSRLRPPWLRTRLVS*RPMRSCGL*SRSLRLPAACEFAA 272
Score = 185 bits (398), Expect(2) = 4e-048
Identities = 80/101 (79%), Positives = 85/101 (84%)
Frame = -2 / +2
Query: 3346 SIKFTCRWKSWRLASEPA*SRRPSAHQSCTQPRGSQTGRHRPSCSFLGSSPVLPNPSR*R 3167
S KFTCRWKS R ASEPA*S RPSAHQSCTQPRGSQ+GR RPSC+F SS LPNPSR*
Sbjct: 272 SSKFTCRWKS*RPASEPA*SHRPSAHQSCTQPRGSQSGRRRPSCNFPSSSAALPNPSR*H 451
Query: 3166 HGRSRSCVARIASPLDRCRHVPR*SDTCSPQIRPSARKDT* 3044
GR +SCV +IASPLDR RHVP+*SDTCSPQI PSARK T*
Sbjct: 452 PGR*QSCVTQIASPLDRYRHVPQ*SDTCSPQIGPSARKGT* 574
Score = 74.4 bits (156), Expect(4) = 4e-024
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = -1 / +1
Query: 3347 KHQIHMPLEVLETCFRARMISSAFSSPVVYAAK 3249
+ QIHMPLEVLETCFRARMISSAFSSPVVYAAK
Sbjct: 271 QQQIHMPLEVLETCFRARMISSAFSSPVVYAAK 369
Score = 36.8 bits (74), Expect(4) = 4e-024
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 3089 YMFPTDTPQRTERYL 3045
YMFPTD PQRT+RYL
Sbjct: 529 YMFPTDRPQRTKRYL 573
Score = 31.3 bits (62), Expect(4) = 4e-024
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -1 / +1
Query: 3185 EPFSVTPRTITVL 3147
EPFSVTPRT+TVL
Sbjct: 433 EPFSVTPRTMTVL 471
Score = 30.4 bits (60), Expect(2) = 4e-048
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2 / +3
Query: 3448 VSCFICHCNIYIHTRGTVHNLFYIAVKKR 3362
+S + C+ I+TRGTVH LF + +++
Sbjct: 117 ISSVLVICHCNIYTRGTVHKLFMCSSEEK 203
Score = 29.5 bits (58), Expect(3) = 7e-060
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / -1
Query: 3385 ISCEQYRGCVY 3417
I CEQYRGC+Y
Sbjct: 180 IICEQYRGCIY 148
Score = 29.0 bits (57), Expect(3) = 4e-051
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / +2
Query: 3416 YTHPRYCSQLI 3384
Y HPRYCSQ+I
Sbjct: 149 YIHPRYCSQII 181
Score = 27.2 bits (53), Expect(4) = 4e-024
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +1
Query: 3417 IYTPAVLFTTY 3385
IYTPAVLFT Y
Sbjct: 148 IYTPAVLFTNY 180
Score = 25.8 bits (50), Expect(2) = 4e-048
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / -2
Query: 3383 K*VVNSTAGVYIYI 3424
K* VNSTAGVYI +
Sbjct: 182 K*FVNSTAGVYIAV 141
Score = 24.4 bits (47), Expect(3) = 4e-051
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / +3
Query: 3436 ICHCNIY 3416
ICHCNIY
Sbjct: 135 ICHCNIY 155
Score = 22.1 bits (42), Expect(3) = 7e-060
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2 / -1
Query: 3443 GHC*LYW 3463
GHC* YW
Sbjct: 129 GHC*FYW 109
>gb|CW191376.1|CW191376 104_613_11178463_116_36939_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11178463, DNA
sequence
Length = 692
Score = 221 bits (478), Expect(3) = 7e-060
Identities = 95/106 (89%), Positives = 101/106 (95%)
Frame = +1 / +3
Query: 3046 RYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEALVRSPGSYKRD 3225
RYL VRWG+SVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEAL+RS GSYKRD
Sbjct: 72 RYLFVRWGLSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEALLRSSGSYKRD 251
Query: 3226 DVVPSETPLAAYTTGELKADEIMRALKQVSKTSSGM*I*CFFYILS 3363
DVVP+ETPLAAYTTGELKADEIMRALKQVSKTSSGM*I C+ ++S
Sbjct: 252 DVVPTETPLAAYTTGELKADEIMRALKQVSKTSSGM*ICCWVRLIS 389
Score = 190 bits (410), Expect(2) = 9e-050
Identities = 82/101 (81%), Positives = 87/101 (86%)
Frame = -3 / -1
Query: 3345 ASNSHAAGSLGDLLQSPHDLVGLQLTSRVRSQGGLRRDDIVPLVASWAPHQCFRTLLGDA 3166
A+NSHAAGSL DLLQSPHDL+GLQLTSRVRSQGGL RDD+VPLV S AP Q FRTLLGD
Sbjct: 371 AANSHAAGSLRDLLQSPHDLIGLQLTSRVRSQGGLSRDDVVPLVTSRAPQQRFRTLLGDT 192
Query: 3165 TDDHGLV*PG*HLL*IGVAMFPGDQIHVPHRYAPAHGKIPE 3043
DD LV*P *HLL*IG+AMFP DQIHVPHR APAH K+PE
Sbjct: 191 PDDDSLV*PR*HLL*IGIAMFPSDQIHVPHR*APAHEKVPE 69
Score = 189 bits (408), Expect(2) = 4e-048
Identities = 81/101 (80%), Positives = 83/101 (82%)
Frame = +3 / +2
Query: 3045 QVSFRALGRICGEHVSDHRGTWRHRSRGDAIRATQDRDRPWRHREGFGSTGEEPRKLQEG 3224
QV FRALG ICGEHVSDH GTWR+RSRGDAI TQD RP HREGFGS EE KLQEG
Sbjct: 71 QVPFRALGPICGEHVSDHWGTWRYRSRGDAIWVTQDCHRPGCHREGFGSAAEELGKLQEG 250
Query: 3225 RCRPV*DPLGCVHDW*AEGRRDHAGSEASLQDFQRHVNLML 3347
R RP *DPLGCVHDW*AEGR DHAGSEA L DFQRHVNL+L
Sbjct: 251 RRRPD*DPLGCVHDW*AEGR*DHAGSEAGL*DFQRHVNLLL 373
Score = 187 bits (403), Expect = 9e-046
Identities = 83/101 (82%), Positives = 85/101 (84%)
Frame = +2 / +1
Query: 3044 SGIFPCAGAYLWGTCI*SPGNMATPI*RRCYPGYTRP*SSVASPRRVRKHW*GAQEATRG 3223
SG F CAGAYLWGTCI*S GNMA PI*RRCY GYTR SS SPRRVRK *GA+E TRG
Sbjct: 70 SGTFSCAGAYLWGTCI*SLGNMAIPI*RRCYLGYTRLSSSGVSPRRVRKRC*GAREVTRG 249
Query: 3224 TMSSRLRPPWLRTRLVS*RPTRSCGL*SKSPRLPAACEFDA 3346
T SSRLRPPWLRTRLVS*RP RSCGL*S+S RLPAACEF A
Sbjct: 250 TTSSRLRPPWLRTRLVS*RPMRSCGL*SRSLRLPAACEFAA 372
Score = 185 bits (398), Expect(2) = 1e-047
Identities = 80/101 (79%), Positives = 85/101 (84%)
Frame = -2 / -3
Query: 3346 SIKFTCRWKSWRLASEPA*SRRPSAHQSCTQPRGSQTGRHRPSCSFLGSSPVLPNPSR*R 3167
S KFTCRWKS R ASEPA*S RPSAHQSCTQPRGSQ+GR RPSC+F SS LPNPSR*
Sbjct: 372 SSKFTCRWKS*RPASEPA*SHRPSAHQSCTQPRGSQSGRRRPSCNFPSSSAALPNPSR*H 193
Query: 3166 HGRSRSCVARIASPLDRCRHVPR*SDTCSPQIRPSARKDT* 3044
GR +SCV +IASPLDR RHVP+*SDTCSPQI PSARK T*
Sbjct: 192 PGR*QSCVTQIASPLDRYRHVPQ*SDTCSPQIGPSARKGT* 70
Score = 74.4 bits (156), Expect(4) = 4e-024
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = -1 / -2
Query: 3347 KHQIHMPLEVLETCFRARMISSAFSSPVVYAAK 3249
+ QIHMPLEVLETCFRARMISSAFSSPVVYAAK
Sbjct: 373 QQQIHMPLEVLETCFRARMISSAFSSPVVYAAK 275
Score = 36.8 bits (74), Expect(4) = 4e-024
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / -2
Query: 3089 YMFPTDTPQRTERYL 3045
YMFPTD PQRT+RYL
Sbjct: 115 YMFPTDRPQRTKRYL 71
Score = 31.3 bits (62), Expect(4) = 4e-024
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -1 / -2
Query: 3185 EPFSVTPRTITVL 3147
EPFSVTPRT+TVL
Sbjct: 211 EPFSVTPRTMTVL 173
Score = 30.4 bits (60), Expect(2) = 9e-050
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2 / -1
Query: 3448 VSCFICHCNIYIHTRGTVHNLFYIAVKKR 3362
+S + C+ I+TRGTVH LF + +++
Sbjct: 527 ISSVLVICHCNIYTRGTVHKLFMCSSEEK 441
Score = 29.5 bits (58), Expect(3) = 7e-060
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 3385 ISCEQYRGCVY 3417
I CEQYRGC+Y
Sbjct: 464 IICEQYRGCIY 496
Score = 29.0 bits (57), Expect(2) = 1e-047
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -3
Query: 3416 YTHPRYCSQLI 3384
Y HPRYCSQ+I
Sbjct: 495 YIHPRYCSQII 463
Score = 27.2 bits (53), Expect(4) = 4e-024
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -2
Query: 3417 IYTPAVLFTTY 3385
IYTPAVLFT Y
Sbjct: 496 IYTPAVLFTNY 464
Score = 25.8 bits (50), Expect(2) = 4e-048
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 3383 K*VVNSTAGVYIYI 3424
K* VNSTAGVYI +
Sbjct: 462 K*FVNSTAGVYIAV 503
Score = 22.1 bits (42), Expect(3) = 7e-060
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2 / +2
Query: 3443 GHC*LYW 3463
GHC* YW
Sbjct: 515 GHC*FYW 535
>gb|CL167259.1|CL167259 104_364_10809943_116_31803_007 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809943, DNA
sequence
Length = 641
Score = 221 bits (478), Expect(3) = 7e-060
Identities = 95/106 (89%), Positives = 101/106 (95%)
Frame = +1 / +1
Query: 3046 RYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEALVRSPGSYKRD 3225
RYL VRWG+SVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEAL+RS GSYKRD
Sbjct: 91 RYLFVRWGLSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTEKGSEALLRSSGSYKRD 270
Query: 3226 DVVPSETPLAAYTTGELKADEIMRALKQVSKTSSGM*I*CFFYILS 3363
DVVP+ETPLAAYTTGELKADEIMRALKQVSKTSSGM*I C+ ++S
Sbjct: 271 DVVPTETPLAAYTTGELKADEIMRALKQVSKTSSGM*ICCWVRLIS 408
Score = 190 bits (410), Expect(3) = 4e-051
Identities = 82/101 (81%), Positives = 87/101 (86%)
Frame = -3 / -3
Query: 3345 ASNSHAAGSLGDLLQSPHDLVGLQLTSRVRSQGGLRRDDIVPLVASWAPHQCFRTLLGDA 3166
A+NSHAAGSL DLLQSPHDL+GLQLTSRVRSQGGL RDD+VPLV S AP Q FRTLLGD
Sbjct: 390 AANSHAAGSLRDLLQSPHDLIGLQLTSRVRSQGGLSRDDVVPLVTSRAPQQRFRTLLGDT 211
Query: 3165 TDDHGLV*PG*HLL*IGVAMFPGDQIHVPHRYAPAHGKIPE 3043
DD LV*P *HLL*IG+AMFP DQIHVPHR APAH K+PE
Sbjct: 210 PDDDSLV*PR*HLL*IGIAMFPSDQIHVPHR*APAHEKVPE 88
Score = 189 bits (408), Expect(2) = 4e-048
Identities = 81/101 (80%), Positives = 83/101 (82%)
Frame = +3 / +3
Query: 3045 QVSFRALGRICGEHVSDHRGTWRHRSRGDAIRATQDRDRPWRHREGFGSTGEEPRKLQEG 3224
QV FRALG ICGEHVSDH GTWR+RSRGDAI TQD RP HREGFGS EE KLQEG
Sbjct: 90 QVPFRALGPICGEHVSDHWGTWRYRSRGDAIWVTQDCHRPGCHREGFGSAAEELGKLQEG 269
Query: 3225 RCRPV*DPLGCVHDW*AEGRRDHAGSEASLQDFQRHVNLML 3347
R RP *DPLGCVHDW*AEGR DHAGSEA L DFQRHVNL+L
Sbjct: 270 RRRPD*DPLGCVHDW*AEGR*DHAGSEAGL*DFQRHVNLLL 392
Score = 187 bits (403), Expect = 9e-046
Identities = 83/101 (82%), Positives = 85/101 (84%)
Frame = +2 / +2
Query: 3044 SGIFPCAGAYLWGTCI*SPGNMATPI*RRCYPGYTRP*SSVASPRRVRKHW*GAQEATRG 3223
SG F CAGAYLWGTCI*S GNMA PI*RRCY GYTR SS SPRRVRK *GA+E TRG
Sbjct: 89 SGTFSCAGAYLWGTCI*SLGNMAIPI*RRCYLGYTRLSSSGVSPRRVRKRC*GAREVTRG 268
Query: 3224 TMSSRLRPPWLRTRLVS*RPTRSCGL*SKSPRLPAACEFDA 3346
T SSRLRPPWLRTRLVS*RP RSCGL*S+S RLPAACEF A
Sbjct: 269 TTSSRLRPPWLRTRLVS*RPMRSCGL*SRSLRLPAACEFAA 391
Score = 185 bits (398), Expect(2) = 4e-048
Identities = 80/101 (79%), Positives = 85/101 (84%)
Frame = -2 / -2
Query: 3346 SIKFTCRWKSWRLASEPA*SRRPSAHQSCTQPRGSQTGRHRPSCSFLGSSPVLPNPSR*R 3167
S KFTCRWKS R ASEPA*S RPSAHQSCTQPRGSQ+GR RPSC+F SS LPNPSR*
Sbjct: 391 SSKFTCRWKS*RPASEPA*SHRPSAHQSCTQPRGSQSGRRRPSCNFPSSSAALPNPSR*H 212
Query: 3166 HGRSRSCVARIASPLDRCRHVPR*SDTCSPQIRPSARKDT* 3044
GR +SCV +IASPLDR RHVP+*SDTCSPQI PSARK T*
Sbjct: 211 PGR*QSCVTQIASPLDRYRHVPQ*SDTCSPQIGPSARKGT* 89
Score = 74.4 bits (156), Expect(4) = 4e-024
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = -1 / -1
Query: 3347 KHQIHMPLEVLETCFRARMISSAFSSPVVYAAK 3249
+ QIHMPLEVLETCFRARMISSAFSSPVVYAAK
Sbjct: 392 QQQIHMPLEVLETCFRARMISSAFSSPVVYAAK 294
Score = 36.8 bits (74), Expect(4) = 4e-024
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / -1
Query: 3089 YMFPTDTPQRTERYL 3045
YMFPTD PQRT+RYL
Sbjct: 134 YMFPTDRPQRTKRYL 90
Score = 31.3 bits (62), Expect(4) = 4e-024
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -1 / -1
Query: 3185 EPFSVTPRTITVL 3147
EPFSVTPRT+TVL
Sbjct: 230 EPFSVTPRTMTVL 192
Score = 30.4 bits (60), Expect(2) = 4e-048
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2 / -3
Query: 3448 VSCFICHCNIYIHTRGTVHNLFYIAVKKR 3362
+S + C+ I+TRGTVH LF + +++
Sbjct: 546 ISSVLVICHCNIYTRGTVHKLFMCSSEEK 460
Score = 29.5 bits (58), Expect(3) = 7e-060
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 3385 ISCEQYRGCVY 3417
I CEQYRGC+Y
Sbjct: 483 IICEQYRGCIY 515
Score = 29.0 bits (57), Expect(3) = 4e-051
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -2
Query: 3416 YTHPRYCSQLI 3384
Y HPRYCSQ+I
Sbjct: 514 YIHPRYCSQII 482
Score = 27.2 bits (53), Expect(4) = 4e-024
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -1
Query: 3417 IYTPAVLFTTY 3385
IYTPAVLFT Y
Sbjct: 515 IYTPAVLFTNY 483
Score = 25.8 bits (50), Expect(2) = 4e-048
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +1
Query: 3383 K*VVNSTAGVYIYI 3424
K* VNSTAGVYI +
Sbjct: 481 K*FVNSTAGVYIAV 522
Score = 24.4 bits (47), Expect(3) = 4e-051
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -3
Query: 3436 ICHCNIY 3416
ICHCNIY
Sbjct: 528 ICHCNIY 508
Score = 22.1 bits (42), Expect(3) = 7e-060
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2 / +3
Query: 3443 GHC*LYW 3463
GHC* YW
Sbjct: 534 GHC*FYW 554
>gb|BI140866.1|BI140866 IP1_40_A12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 608
Score = 178 bits (383), Expect(3) = 1e-056
Identities = 75/118 (63%), Positives = 91/118 (77%)
Frame = +1 / +1
Query: 1528 PPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDI 1707
PPIW+++MRF TNP KPMILA++RP P+KNITTLVKAFGECRPLRELANLTLIMGNR+ I
Sbjct: 163 PPIWSQIMRFFTNPRKPMILAVARPYPEKNITTLVKAFGECRPLRELANLTLIMGNREAI 342
Query: 1708 DDMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKGVFINPALV 1881
M +A+VLT+VL LID+YDLYG VA+PKHH+ + K KG F +L+
Sbjct: 343 SKMHNMSAAVLTSVLTLIDEYDLYGQVAYPKHHSPLGSS*HLSFSCKNKGGFCKCSLL 516
Score = 116 bits (247), Expect(3) = 5e-043
Identities = 57/94 (60%), Positives = 66/94 (70%)
Frame = -1 / -1
Query: 1808 L*CLGNATLPYRSYLSISFRTVVRTLALPADMSSMSSLLPMIRVRFASSLSGRHSPNALT 1629
L*CLG AT PY+SY SI+ T V+T AL + ++S LP+I VRFASSLSGRHSPNA T
Sbjct: 443 L*CLGYAT*PYKSYSSINVSTDVKTAALILCILDIASRLPIINVRFASSLSGRHSPNAFT 264
Query: 1628 RVVMFFFGSGLDNARIIGL*GLVRNRITSAQIGG 1527
VV+FF G G ARIIG G V+ RI QIGG
Sbjct: 263 SVVIFFSG*GRATARIIGFLGFVKKRII*DQIGG 162
Score = 85.8 bits (181), Expect(2) = 7e-023
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +1 / +2
Query: 1813 ADVPEIYRLAAKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDI 1965
++VP+IYRLAA+ KG F+N A E FG+TLIEAA +GLPI+ATKNG PV+I
Sbjct: 449 SEVPDIYRLAARTKGAFVNVAYFEQFGVTLIEAAMNGLPIIATKNGAPVEI 601
Score = 69.3 bits (145), Expect(3) = 5e-043
Identities = 32/51 (62%), Positives = 37/51 (72%)
Frame = -1 / -3
Query: 1967 VMSTGPPFLVATIGSPCAAASIRVRPNGSTRAGLMKTPFILAARR*ISGTS 1815
++STG PF VA IG P AASIRV PN S A K PF+LAA+R*+SGTS
Sbjct: 603 LISTGAPFFVAIIGKPFIAASIRVTPNCSK*ATFTKAPFVLAAKR*MSGTS 451
Score = 60.6 bits (126), Expect(3) = 1e-056
Identities = 19/32 (59%), Positives = 29/32 (90%)
Frame = +1 / +1
Query: 1354 LRARARRGVSCHGRYMPRMVVIPPGMDFSNVV 1449
LRAR +RG +C+GR+MPRMV+IPPG++F +++
Sbjct: 13 LRARVKRGANCYGRFMPRMVIIPPGVEFGHII 108
Score = 45.1 bits (92), Expect(2) = 7e-023
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3 / +3
Query: 1572 QADDPGVIKTRPEEEHHYPRQSVWRVSSTQGTCKPYSDHG* 1694
+A D EE++Y +S+W +S+T+G CKPY D+G*
Sbjct: 207 EAYDSSCCSPLSREEYYYACKSIW*MSATKGACKPYIDNG* 329
Score = 31.3 bits (62), Expect(3) = 5e-043
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -1 / -1
Query: 1424 GGITTILGM*RPWQLTPRLARALS 1353
GGI TI G+ RP QL PRL A S
Sbjct: 83 GGIITIRGIKRP*QLAPRLTLARS 12
Score = 23.5 bits (45), Expect(3) = 1e-056
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +3 / +1
Query: 1887 VWSHPDRGC 1913
+WS+ DRGC
Sbjct: 523 IWSYSDRGC 549
>gb|BI140744.1|BI140744 IP1_38_B12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 606
Score = 177 bits (382), Expect(3) = 2e-056
Identities = 75/118 (63%), Positives = 90/118 (76%)
Frame = +1 / +1
Query: 1528 PPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDI 1707
PPIW+++MRF TNP KPMILA++RP P+KNITTLVKAFGECRPLRELANLTLIMGNR+ I
Sbjct: 163 PPIWSQIMRFFTNPRKPMILAVARPYPEKNITTLVKAFGECRPLRELANLTLIMGNREAI 342
Query: 1708 DDMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKGVFINPALV 1881
M +A+VLT+VL LID+YDLYG VA+PKHH + K KG F +L+
Sbjct: 343 SKMHNMSAAVLTSVLTLIDEYDLYGQVAYPKHHKXLGSS*HLSFSCKNKGGFCKCSLL 516
Score = 116 bits (247), Expect(3) = 2e-043
Identities = 57/94 (60%), Positives = 66/94 (70%)
Frame = -1 / -2
Query: 1808 L*CLGNATLPYRSYLSISFRTVVRTLALPADMSSMSSLLPMIRVRFASSLSGRHSPNALT 1629
L*CLG AT PY+SY SI+ T V+T AL + ++S LP+I VRFASSLSGRHSPNA T
Sbjct: 443 L*CLGYAT*PYKSYSSINVSTDVKTAALILCILDIASRLPIINVRFASSLSGRHSPNAFT 264
Query: 1628 RVVMFFFGSGLDNARIIGL*GLVRNRITSAQIGG 1527
VV+FF G G ARIIG G V+ RI QIGG
Sbjct: 263 SVVIFFSG*GRATARIIGFLGFVKKRII*DQIGG 162
Score = 85.8 bits (181), Expect(2) = 7e-023
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +1 / +2
Query: 1795 PKHHNQADVPEIYRLAAKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDI 1965
P ++VP+IYRLAA+ KG F+N A E FG+TLIEAA +GLPI+ATKNG PV+I
Sbjct: 431 PSIIXHSEVPDIYRLAARTKGAFVNVAYFEQFGVTLIEAAMNGLPIIATKNGAPVEI 601
Score = 71.2 bits (149), Expect(3) = 2e-043
Identities = 35/58 (60%), Positives = 40/58 (68%)
Frame = -1 / -1
Query: 1967 VMSTGPPFLVATIGSPCAAASIRVRPNGSTRAGLMKTPFILAARR*ISGTSA*L*CLG 1794
++STG PF VA IG P AASIRV PN S A K PF+LAA+R*+SGTS L LG
Sbjct: 603 LISTGAPFFVAIIGKPFIAASIRVTPNCSK*ATFTKAPFVLAAKR*MSGTSEXLMMLG 430
Score = 60.6 bits (126), Expect(3) = 2e-056
Identities = 19/32 (59%), Positives = 29/32 (90%)
Frame = +1 / +1
Query: 1354 LRARARRGVSCHGRYMPRMVVIPPGMDFSNVV 1449
LRAR +RG +C+GR+MPRMV+IPPG++F +++
Sbjct: 13 LRARVKRGANCYGRFMPRMVIIPPGVEFGHII 108
Score = 45.1 bits (92), Expect(2) = 7e-023
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3 / +3
Query: 1572 QADDPGVIKTRPEEEHHYPRQSVWRVSSTQGTCKPYSDHG* 1694
+A D EE++Y +S+W +S+T+G CKPY D+G*
Sbjct: 207 EAYDSSCCSPLSREEYYYACKSIW*MSATKGACKPYIDNG* 329
Score = 31.3 bits (62), Expect(3) = 2e-043
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -1 / -2
Query: 1424 GGITTILGM*RPWQLTPRLARALS 1353
GGI TI G+ RP QL PRL A S
Sbjct: 83 GGIITIRGIKRP*QLAPRLTLARS 12
Score = 23.5 bits (45), Expect(3) = 2e-056
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +3 / +1
Query: 1887 VWSHPDRGC 1913
+WS+ DRGC
Sbjct: 523 IWSYSDRGC 549
>gb|CW227901.1|CW227901 104_667_11206064_148_37245_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11206064, DNA
sequence
Length = 524
Score = 119 bits (255), Expect(2) = 3e-055
Identities = 48/62 (77%), Positives = 54/62 (87%)
Frame = +1 / -2
Query: 1678 TLIMGNRDDIDDMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKG 1857
TLI+GNRDDI++MS G A+VLT VLKLID+YDLYG VA+PKHH Q DVP IYRLAAK KG
Sbjct: 187 TLILGNRDDIEEMSGGAATVLTAVLKLIDRYDLYGCVAYPKHHKQTDVPHIYRLAAKTKG 8
Query: 1858 VF 1863
VF
Sbjct: 7 VF 2
Score = 119 bits (255), Expect(2) = 3e-055
Identities = 49/84 (58%), Positives = 58/84 (69%)
Frame = +1 / -1
Query: 1426 GMDFSNVVVHEXXXXXXXXXXXXXXLEGASPKSMPPIWAEVMRFLTNPHKPMILALSRPD 1605
GMDFS V + + +S K +PPIW+EV+RF NPHKPMILALSRPD
Sbjct: 524 GMDFSYVDTQDLAAIGGGDADLQMIISSSSKKPLPPIWSEVLRFFANPHKPMILALSRPD 345
Query: 1606 PKKNITTLVKAFGECRPLRELANL 1677
PKKN+TTL+KA+GE R LRELANL
Sbjct: 344 PKKNVTTLLKAYGESRHLRELANL 273
Score = 75.8 bits (159), Expect(2) = 1e-027
Identities = 38/61 (62%), Positives = 43/61 (70%)
Frame = -1 / +3
Query: 1859 TPFILAARR*ISGTSA*L*CLGNATLPYRSYLSISFRTVVRTLALPADMSSMSSLLPMIR 1680
TP +LAARR*+ GTS L CLG AT P RS S+S T VRT+A P D+SSMSSL P I
Sbjct: 6 TPLVLAARR*MCGTSVCLWCLG*ATQP*RS*RSMSLSTAVRTVAAPPDISSMSSLFPSIS 185
Query: 1679 V 1677
V
Sbjct: 186 V 188
Score = 71.2 bits (149), Expect(2) = 1e-027
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = -1 / +1
Query: 1688 MIRVRFASSLSGRHSPNALTRVVMFFFGSGLDNARIIGL*GLVRNRITSAQIGG 1527
++ RFASS R SP AL+ VV FFFGSGLD+ARI+GL GL +N TS Q+GG
Sbjct: 262 LVLTRFASSRRWRLSP*ALSSVVTFFFGSGLDSARIMGLCGLAKNLSTSDQMGG 423
>gb|CW388976.1|CW388976 fsbb001f073p13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f073p13, DNA
sequence
Length = 602
Score = 126 bits (269), Expect(3) = 5e-052
Identities = 52/58 (89%), Positives = 54/58 (93%)
Frame = +1 / -1
Query: 718 QVKYVVELARAMSMMPGVYRVDLFTRQVSSLDVDWSYGEPTEMLCAGSNDGEGMGESG 891
QVKYVVELARAMSMMPGVYRVDLFTRQVSS DVDWSYGEPTEMLC+GSNDGEG +G
Sbjct: 182 QVKYVVELARAMSMMPGVYRVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGGESAG 9
Score = 122 bits (261), Expect(2) = 1e-027
Identities = 49/61 (80%), Positives = 53/61 (86%)
Frame = +2 / -2
Query: 695 VVILIQVAR*NMWSNLQERCQ*CLECTGWTSSLVKCHLLTWTGATVSQPRCYAPVPMMER 874
V ++ + R*NM SNLQ +CQ*CLECTGWTSSLVKCHLLTWTGA VSQ RCYAPVPMMER
Sbjct: 205 VRLIFESHR*NMLSNLQGQCQ*CLECTGWTSSLVKCHLLTWTGAMVSQRRCYAPVPMMER 26
Query: 875 G 877
G
Sbjct: 25 G 23
Score = 110 bits (235), Expect(4) = 9e-047
Identities = 46/52 (88%), Positives = 46/52 (88%)
Frame = -2 / +2
Query: 874 PLHHWNRRITSRLAHRSSSPRQEMTLDE*RGPPCTLQASLTSLLQVRPHISP 719
PLHHWNR ITS LAH SSSPRQEMTLDE*RGPPCTLQASLT LQVR HISP
Sbjct: 26 PLHHWNRSITSPLAHHSSSPRQEMTLDE*RGPPCTLQASLTLPLQVRQHISP 181
Score = 107 bits (228), Expect(3) = 1e-044
Identities = 46/52 (88%), Positives = 47/52 (90%)
Frame = +3 / -3
Query: 720 GEICGRTCKSDVNDAWSVQGGPLHSSSVIS*RGLELR*ANRDVMRRFQ*WRG 875
GEIC RTCK +VNDAWSVQGGPLHSSSVIS*RGLEL *AN DVM RFQ*WRG
Sbjct: 180 GEICCRTCKGNVNDAWSVQGGPLHSSSVIS*RGLELW*ANGDVMLRFQ*WRG 25
Score = 96.8 bits (205), Expect(4) = 4e-036
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = -1 / +1
Query: 851 HNISVGSP*LQSTSRDDT*RVKRSTLYTPGIIDIALASSTTYFT 720
HNISVGSP*LQSTS DDT*RVKRSTLYTPGIIDIALASSTTYFT
Sbjct: 49 HNISVGSP*LQSTSGDDT*RVKRSTLYTPGIIDIALASSTTYFT 180
Score = 68.4 bits (143), Expect(3) = 5e-052
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +1 / -3
Query: 565 TTKKKFQRNFSDLTVWSDDNKEKKLYIVLI 654
T KKKFQRNFSDLTVWS DNKEKKLYIVLI
Sbjct: 600 TAKKKFQRNFSDLTVWSADNKEKKLYIVLI 511
Score = 63.8 bits (133), Expect(3) = 1e-044
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +3 / -2
Query: 564 DDQEEVPEELL*PYRLV*RQ*GEEALHCAHQ 656
D QEEVPEELL*P RLV RQ*GEEALHCAHQ
Sbjct: 601 DSQEEVPEELL*PDRLVCRQ*GEEALHCAHQ 509
Score = 63.4 bits (132), Expect(4) = 9e-047
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = -3 / +1
Query: 654 DEHNVKLLLLIVVRPDGKVREVPLELLLG 568
DEHNVKLLLLIV RPDG+VREVPLELLLG
Sbjct: 511 DEHNVKLLLLIVGRPDGQVREVPLELLLG 597
Score = 60.6 bits (126), Expect(4) = 9e-047
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = -1 / +3
Query: 725 FTWPPVSESRPSSMFSPRTRPC 660
FTWPPVSESRPSSMFSPRTRPC
Sbjct: 261 FTWPPVSESRPSSMFSPRTRPC 326
Score = 60.2 bits (125), Expect(3) = 5e-052
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +3 / -1
Query: 645 CAHQRAWSCSWRKHGTRS*F*YRWPGE 725
C Q AWSCSWRKHGTRS*F*+RWPG+
Sbjct: 341 C*VQCAWSCSWRKHGTRS*F*HRWPGK 261
Score = 58.8 bits (122), Expect(3) = 1e-044
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +1 / -2
Query: 655 SVHGLVRGENMELGRDSDTGGQVKYVV 735
SVHGLVRGENMELGRDSDTGGQV ++
Sbjct: 331 SVHGLVRGENMELGRDSDTGGQVNILI 251
Score = 51.5 bits (106), Expect(4) = 4e-036
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2 / +1
Query: 721 PGHLYQNHDLVPCFLHEQDHA 659
PGH QNHDLVPCF HEQDHA
Sbjct: 265 PGHRCQNHDLVPCFRHEQDHA 327
Score = 42.3 bits (86), Expect(4) = 4e-036
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -1 / +2
Query: 614 DQTVRSEKFLWNFFLVV 564
DQTVRSEKFLWNFFL V
Sbjct: 551 DQTVRSEKFLWNFFLAV 601
Score = 30.4 bits (60), Expect(4) = 4e-036
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2 / +3
Query: 655 **AQCKASSPYC 620
**AQCKASSPYC
Sbjct: 510 **AQCKASSPYC 545
Score = 28.6 bits (56), Expect(2) = 1e-027
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2 / -1
Query: 623 IRRRSFTLCSSACMV 667
IRRRSFTLCSS +
Sbjct: 542 IRRRSFTLCSSGLSI 498
Score = 22.6 bits (43), Expect(4) = 9e-047
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2 / +2
Query: 901 CRLRHSHPSPLH 866
CRLRHS P H
Sbjct: 2 CRLRHSRPPLHH 37
>gb|CW367400.1|CW367400 fsbb001f040o01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f040o01, DNA
sequence
Length = 805
Score = 172 bits (370), Expect(2) = 9e-052
Identities = 73/79 (92%), Positives = 76/79 (96%)
Frame = +1 / -1
Query: 418 KQLELEGIQRISARRKEQEQVRREATEDLAEDLSEGEKGDTIGELAPVETTKKKFQRNFS 597
+QLELEG+QRISARRKEQEQVRREATEDLAEDL EGEK DT+GELAPVET KKKFQRNFS
Sbjct: 508 EQLELEGMQRISARRKEQEQVRREATEDLAEDLDEGEKADTLGELAPVETAKKKFQRNFS 329
Query: 598 DLTVWSDDNKEKKLYIVLI 654
DLTVWSDDNKEKKLYIVLI
Sbjct: 328 DLTVWSDDNKEKKLYIVLI 272
Score = 110 bits (234), Expect(2) = 3e-033
Identities = 51/70 (72%), Positives = 54/70 (77%)
Frame = -3 / +2
Query: 654 DEHNVKLLLLIVVRPDGKVREVPLELLLGRLNRRKLADGVSLLAF*QILGQVXXXXXXXX 475
DEHNVKLLLLIVVRPDG+VREVPLELLLG LNRRKLA+GV LAF QIL QV
Sbjct: 272 DEHNVKLLLLIVVRPDGQVREVPLELLLGCLNRRKLAEGVRFLAFIQILSQVLRRLTAHL 451
Query: 474 XXXLPSCRDS 445
LP+CRDS
Sbjct: 452 LLFLPACRDS 481
Score = 80.8 bits (170), Expect(2) = 7e-022
Identities = 40/84 (47%), Positives = 47/84 (55%)
Frame = -1 / +3
Query: 614 DQTVRSEKFLWNFFLVVSTGASSPMXXXXXXXXXXXXXXXXXXXXXXXXSFLLAEILWMP 435
DQTVRSEKFLWNFFL VSTGASSP SFL AEIL MP
Sbjct: 312 DQTVRSEKFLWNFFLAVSTGASSPRVSAFSPSSRSSARSSVASRRTCSCSFLRAEILCMP 491
Query: 434 SSSSCFFLRARCQIRQHMFSSLVL 363
SSSSC + Q R+++ +++ L
Sbjct: 492 SSSSCSNKIQKHQRRENLSTNMQL 563
Score = 66.6 bits (139), Expect(3) = 6e-023
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = +3 / -3
Query: 561 *DDQEEVPEELL*PYRLV*RQ*GEEALHCAHQ 656
*D QEEVPEELL*P RLV*RQ*GEEALHCAHQ
Sbjct: 365 *DSQEEVPEELL*PDRLV*RQ*GEEALHCAHQ 270
Score = 60.6 bits (126), Expect(2) = 3e-033
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = -1 / +1
Query: 725 FTWPPVSESRPSSMFSPRTRPC 660
FTWPPVSESRPSSMFSPRTRPC
Sbjct: 22 FTWPPVSESRPSSMFSPRTRPC 87
Score = 60.2 bits (125), Expect(2) = 9e-052
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +3 / -2
Query: 645 CAHQRAWSCSWRKHGTRS*F*YRWPGE 725
C Q AWSCSWRKHGTRS*F*+RWPG+
Sbjct: 102 C*VQCAWSCSWRKHGTRS*F*HRWPGK 22
Score = 58.8 bits (122), Expect(3) = 6e-023
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +1 / -3
Query: 655 SVHGLVRGENMELGRDSDTGGQVKYVV 735
SVHGLVRGENMELGRDSDTGGQV ++
Sbjct: 92 SVHGLVRGENMELGRDSDTGGQVNILI 12
Score = 51.5 bits (106), Expect(2) = 7e-022
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2 / +2
Query: 721 PGHLYQNHDLVPCFLHEQDHA 659
PGH QNHDLVPCF HEQDHA
Sbjct: 26 PGHRCQNHDLVPCFRHEQDHA 88
Score = 31.8 bits (63), Expect(3) = 6e-023
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3 / -3
Query: 420 AAGAGGHPENLGKKE 464
AAGAGGH ENLG +E
Sbjct: 506 AAGAGGHAENLGTQE 462
>gb|CL701718.2|CL701718 SP__Ba0076G02.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0076G02 3', DNA sequence
Length = 596
Score = 122 bits (261), Expect(3) = 1e-051
Identities = 51/58 (87%), Positives = 53/58 (91%)
Frame = +1 / +3
Query: 718 QVKYVVELARAMSMMPGVYRVDLFTRQVSSLDVDWSYGEPTEMLCAGSNDGEGMGESG 891
QVKYVVELARAMSMMPGVYRVDLFTRQVSS DVDWSYGEPTEMLC+GSND EG +G
Sbjct: 348 QVKYVVELARAMSMMPGVYRVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDEEGGESAG 521
Score = 117 bits (250), Expect = 1e-024
Identities = 47/61 (77%), Positives = 52/61 (85%)
Frame = +2 / +1
Query: 695 VVILIQVAR*NMWSNLQERCQ*CLECTGWTSSLVKCHLLTWTGATVSQPRCYAPVPMMER 874
V ++ + R*NM SNLQ +CQ*CLECTGWTSSLVKCHLLTWTGA VSQ RCYAP PMM+R
Sbjct: 325 VRLIFESHR*NMLSNLQGQCQ*CLECTGWTSSLVKCHLLTWTGAMVSQRRCYAPDPMMKR 504
Query: 875 G 877
G
Sbjct: 505 G 507
Score = 106 bits (226), Expect(3) = 2e-047
Identities = 45/52 (86%), Positives = 45/52 (86%)
Frame = -2 / -3
Query: 874 PLHHWNRRITSRLAHRSSSPRQEMTLDE*RGPPCTLQASLTSLLQVRPHISP 719
PLHHW R ITS LAH SSSPRQEMTLDE*RGPPCTLQASLT LQVR HISP
Sbjct: 504 PLHHWIRSITSPLAHHSSSPRQEMTLDE*RGPPCTLQASLTLPLQVRQHISP 349
Score = 97.7 bits (207), Expect(3) = 1e-042
Identities = 44/52 (84%), Positives = 45/52 (86%)
Frame = +3 / +2
Query: 720 GEICGRTCKSDVNDAWSVQGGPLHSSSVIS*RGLELR*ANRDVMRRFQ*WRG 875
GEIC RTCK +VNDAWSVQGGPLHSSSVIS*RGLEL *AN DVM R Q* RG
Sbjct: 350 GEICCRTCKGNVNDAWSVQGGPLHSSSVIS*RGLELW*ANGDVMLRIQ**RG 505
Score = 96.8 bits (205), Expect(3) = 6e-041
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = -1 / -2
Query: 851 HNISVGSP*LQSTSRDDT*RVKRSTLYTPGIIDIALASSTTYFT 720
HNISVGSP*LQSTS DDT*RVKRSTLYTPGIIDIALASSTTYFT
Sbjct: 481 HNISVGSP*LQSTSGDDT*RVKRSTLYTPGIIDIALASSTTYFT 350
Score = 64.8 bits (135), Expect(3) = 2e-047
Identities = 26/34 (76%), Positives = 26/34 (76%)
Frame = -2 / -3
Query: 967 GGKATTLPS*GIYPAAHTVCAQCRLRHSHPSPLH 866
GGKAT LPS*GIY HTVCAQCRLRHS P H
Sbjct: 594 GGKATALPS*GIYRVTHTVCAQCRLRHSRPPLHH 493
Score = 63.4 bits (132), Expect(3) = 1e-051
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = +2 / +1
Query: 866 MERGWVRVAEPTLCAYRVGRGINTSRRKRCGLTS 967
M + RV EPTLCAYRVG INTSRRKRCGLTS
Sbjct: 493 MMKRGARVPEPTLCAYRVGHAINTSRRKRCGLTS 594
Score = 61.6 bits (128), Expect(3) = 6e-041
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -3 / -1
Query: 969 LEVRPQRFLLEVFIPRPTRYAHNVGSATL 883
LEVRPQRFLLEVFI PTRYAHNVGS TL
Sbjct: 596 LEVRPQRFLLEVFIA*PTRYAHNVGSGTL 510
Score = 60.6 bits (126), Expect(3) = 2e-047
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = -1 / -1
Query: 725 FTWPPVSESRPSSMFSPRTRPC 660
FTWPPVSESRPSSMFSPRTRPC
Sbjct: 269 FTWPPVSESRPSSMFSPRTRPC 204
Score = 60.2 bits (125), Expect(3) = 1e-051
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +3 / +3
Query: 645 CAHQRAWSCSWRKHGTRS*F*YRWPGE 725
C Q AWSCSWRKHGTRS*F*+RWPG+
Sbjct: 189 C*VQCAWSCSWRKHGTRS*F*HRWPGK 269
Score = 59.3 bits (123), Expect(3) = 1e-042
Identities = 24/30 (80%), Positives = 24/30 (80%)
Frame = +3 / +2
Query: 879 G*EWRSLHCAHTVWAAG*IPQEGSVVALPP 968
G E RSLHCAHTVW *IPQEGS VALPP
Sbjct: 506 GRECRSLHCAHTVWVTR*IPQEGSAVALPP 595
Score = 58.8 bits (122), Expect(3) = 1e-042
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +1 / +1
Query: 655 SVHGLVRGENMELGRDSDTGGQVKYVV 735
SVHGLVRGENMELGRDSDTGGQV ++
Sbjct: 199 SVHGLVRGENMELGRDSDTGGQVNILI 279
Score = 57.9 bits (120), Expect(4) = 4e-029
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -3 / -1
Query: 876 PLSIIGTGA*HLGWLTVAPVHVKR*HLT 793
PL IIG+GA*HL WLT+APVHV+R*HLT
Sbjct: 506 PLFIIGSGA*HLRWLTIAPVHVRR*HLT 423
Score = 57.9 bits (120), Expect(4) = 4e-029
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -1 / -2
Query: 968 WR*GHNASFLRYLSRGPHGMRTM*A 894
WR*GH+ASFLRYLSR PHGMRTM*A
Sbjct: 595 WR*GHSASFLRYLSRDPHGMRTM*A 521
Score = 51.5 bits (106), Expect(3) = 6e-041
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2 / -2
Query: 721 PGHLYQNHDLVPCFLHEQDHA 659
PGH QNHDLVPCF HEQDHA
Sbjct: 265 PGHRCQNHDLVPCFRHEQDHA 203
Score = 46.0 bits (94), Expect(4) = 4e-029
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = -3 / -3
Query: 723 HLATCIRITT*FHVFSTNKTMH 658
+LAT +RITT*FHVF+TNKTMH
Sbjct: 267 YLATGVRITT*FHVFATNKTMH 202
Score = 25.4 bits (49), Expect(4) = 4e-029
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / -1
Query: 744 CKFDHIFHL 718
CKFD+IFHL
Sbjct: 374 CKFDNIFHL 348
>gb|BG053850.1|BG053850 RHIZ2_10_E12.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 509
Score = 148 bits (318), Expect(2) = 4e-050
Identities = 58/98 (59%), Positives = 77/98 (78%)
Frame = +1 / +3
Query: 256 FNPSHYFVEEVVKGVDESDLHRTWIKVVATRNARERSTRLENMCWRIWHLARKKKQLELE 435
F+P+ YFVEEV+ G DE+DL++TW++ A R+ +ER+TRLENM WRIW+L RKKKQ+E E
Sbjct: 45 FSPARYFVEEVISGFDETDLYKTWVRTSAMRSPQERNTRLENMSWRIWNLVRKKKQIEGE 224
Query: 436 GIQRISARRKEQEQVRREATEDLAEDLSEGEKGDTIGE 549
R+S RR E+E+ R+ A DL+EDLSEGEKG+T E
Sbjct: 225 EASRLSKRRMEREKARQYAATDLSEDLSEGEKGETNNE 338
Score = 73.9 bits (155), Expect(2) = 4e-050
Identities = 27/37 (72%), Positives = 34/37 (91%)
Frame = +1 / +3
Query: 601 LTVWSDDNKEKKLYIVLISVHGLVRGENMELGRDSDT 711
+ W++ +K+KKLYIVLIS+HGL+RGENMELGRDSDT
Sbjct: 399 IETWANQHKDKKLYIVLISIHGLIRGENMELGRDSDT 509
>gb|CW394820.1|CW394820 fsbb001f082j14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f082j14, DNA
sequence
Length = 571
Score = 149 bits (321), Expect(3) = 1e-047
Identities = 62/77 (80%), Positives = 68/77 (88%)
Frame = +1 / +2
Query: 1678 TLIMGNRDDIDDMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKG 1857
TLI+GNRDDI++MS G A+VLT VLKLID+Y LYG VA+PKHH Q DVP IYRLAAK KG
Sbjct: 179 TLILGNRDDIEEMSGGAATVLTAVLKLIDRYYLYGCVAYPKHHKQTDVPHIYRLAAKTKG 358
Query: 1858 VFINPALVEPFGLTLIE 1908
VFINPALVEPFGLTLIE
Sbjct: 359 VFINPALVEPFGLTLIE 409
Score = 103 bits (219), Expect(2) = 3e-026
Identities = 51/77 (66%), Positives = 56/77 (72%)
Frame = -1 / -2
Query: 1907 SIRVRPNGSTRAGLMKTPFILAARR*ISGTSA*L*CLGNATLPYRSYLSISFRTVVRTLA 1728
SIRVRPNGST AGLM TP +LAARR*+ GTS L CLG AT P R S+S T VRT+A
Sbjct: 408 SIRVRPNGSTSAGLMNTPLVLAARR*MCGTSVCLWCLG*ATQP*R**RSMSLSTAVRTVA 229
Query: 1727 LPADMSSMSSLLPMIRV 1677
P D+SSMSSL P I V
Sbjct: 228 APPDISSMSSLFPSISV 178
Score = 58.3 bits (121), Expect(3) = 1e-047
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1 / +1
Query: 1585 LALSRPDPKKNITTLVKAFGECRPLRELANL 1677
LALSRPDPKK +TTL+KA+GE R LRELA+L
Sbjct: 1 LALSRPDPKKTVTTLLKAYGESRHLRELADL 93
Score = 39.1 bits (79), Expect(2) = 3e-026
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -1 / -3
Query: 1688 MIRVRFASSLSGRHSPNALTRVVMFFFGSGLDNA 1587
++ R ASS R SP AL+ VV FFGSGLD+A
Sbjct: 104 LVLTRSASSRRWRLSP*ALSSVVTVFFGSGLDSA 3
Score = 24.0 bits (46), Expect(3) = 1e-047
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 1900 LIEAAAHGLPIVA 1938
L+ AAA GLP+VA
Sbjct: 533 LVHAAASGLPVVA 571
>gb|BG465156.1|BG465156 EM1_34_B02.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 323
Score = 98.2 bits (208), Expect(4) = 4e-047
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +1 / +2
Query: 1276 VITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVSCHGRY 1398
V TSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVSCHGR+
Sbjct: 41 VXTSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVSCHGRF 163
Score = 95.5 bits (202), Expect(4) = 2e-045
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = -1 / -3
Query: 1394 RPWQLTPRLARALSTFSSLTSNPSYNPHCSSISCLVLVIT 1275
RPWQLTPRLARAL+TFSSLTSNPSYNPHCSSISCLVLV T
Sbjct: 159 RPWQLTPRLARALNTFSSLTSNPSYNPHCSSISCLVLVXT 40
Score = 86.8 bits (183), Expect(3) = 7e-035
Identities = 36/49 (73%), Positives = 37/49 (75%)
Frame = +3 / +3
Query: 1413 GDSSGNGFQQCCSS*RH*WGW*RQR*YRWFGGCLTQVNAPNLGRSDAVP 1559
G S Q C S*RH*WGW*+QR*YRWFGGCLTQVNA NLG DAVP
Sbjct: 174 GGDSSRNGLQQCYS*RH*WGW*QQR*YRWFGGCLTQVNASNLG*GDAVP 320
Score = 78.0 bits (164), Expect(4) = 4e-047
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +2 / +2
Query: 1451 FMKTLMGMVTSKMISLVWRVPHPSQCPQFGPK*CGS 1558
F+KTLMGMVT+KMISLVWR+PHPSQC QFG +*CGS
Sbjct: 212 FLKTLMGMVTAKMISLVWRLPHPSQCLQFGLR*CGS 319
Score = 77.6 bits (163), Expect(3) = 3e-032
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = -3 / -2
Query: 1395 TTMAANPAPRPCPQHFLKLDIKSIVQSPLLINLLPCAR 1282
TTMAANP PRP QHFLKLD+KSIV SPL INLLPCAR
Sbjct: 160 TTMAANPTPRPGSQHFLKLDVKSIV*SPLFINLLPCAR 47
Score = 76.2 bits (160), Expect(4) = 2e-045
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = -2 / -2
Query: 1558 GTASLRPKLGALTWVRHPPNQRYHL*RHHPHQCLHE 1451
GTAS +PKL ALTWVR PPNQRYHL HHPHQCL E
Sbjct: 319 GTASPQPKLEALTWVRQPPNQRYHLCCHHPHQCLQE 212
Score = 75.8 bits (159), Expect(3) = 3e-032
Identities = 30/36 (83%), Positives = 30/36 (83%)
Frame = -3 / -3
Query: 1557 EPHHFGPNWGH*LG*GTLQTNDIIFDVTIPINVFMN 1450
EPHH PNW H*LG*G LQTNDIIF VTIPINVF N
Sbjct: 318 EPHHLSPNWRH*LG*GNLQTNDIIFAVTIPINVFRN 211
Score = 74.8 bits (157), Expect(3) = 7e-035
Identities = 35/48 (72%), Positives = 39/48 (81%)
Frame = +2 / +3
Query: 1256 PWMRQSL*SRAQGRRLMSSGDCTMDLMSSLRKC*GHGRGAGLAAMVVT 1399
P ++L SRAQGRRLM+SGD TMDL SSLRKC* GRG GLAAMVV+
Sbjct: 21 PGCVRALSSRAQGRRLMNSGDYTMDLTSSLRKC*EPGRGVGLAAMVVS 164
Score = 73.9 bits (155), Expect(4) = 5e-030
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +3 / +1
Query: 1275 CNHEHKAGD**AVGIVRWI*CQA*ESAEGTGEARG*LPWS 1394
C HEHKAGD** VGI+RWI* QA*ES E GEA G*LPWS
Sbjct: 40 CXHEHKAGD**TVGIIRWI*RQA*ESVESPGEAWG*LPWS 159
Score = 47.3 bits (97), Expect(4) = 5e-030
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 1501 LEGASPKSMPPIWAEVMRFL 1560
LE ASPKSMPPIWAEVMRFL
Sbjct: 262 LEVASPKSMPPIWAEVMRFL 321
Score = 43.2 bits (88), Expect(4) = 4e-047
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +1 / +1
Query: 1396 YMPRMVVIPPGMDFSNVV 1449
++PRMVVIPPGMDFSNV+
Sbjct: 160 FLPRMVVIPPGMDFSNVI 213
Score = 41.8 bits (85), Expect(4) = 5e-030
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2 / +2
Query: 1400 CLGWW*FLREWISAML 1447
CLGWW*FL+EW SAML
Sbjct: 164 CLGWW*FLQEWTSAML 211
Score = 38.6 bits (78), Expect(4) = 2e-045
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -3 / -3
Query: 1446 NIAEIHSRRNHHHPR 1402
NIAE+HS RNHHHPR
Sbjct: 210 NIAEVHSWRNHHHPR 166
Score = 32.2 bits (64), Expect(4) = 2e-045
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 1273 ALTHPGPAPHPR 1238
ALTHPG APHPR
Sbjct: 37 ALTHPGTAPHPR 2
Score = 29.0 bits (57), Expect(4) = 4e-047
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / +2
Query: 1238 SRVRSWPWMRQS 1273
SRVRS PWMRQS
Sbjct: 2 SRVRSCPWMRQS 37
Score = 27.6 bits (54), Expect(3) = 7e-035
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 1239 RG*GAGPGCVRA 1274
RG*GA PGCVRA
Sbjct: 3 RG*GAVPGCVRA 38
Score = 27.2 bits (53), Expect(3) = 3e-032
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -3 / -3
Query: 1272 L*RIQGQLLTLD 1237
L*RIQGQLLTLD
Sbjct: 36 L*RIQGQLLTLD 1
Score = 27.2 bits (53), Expect(4) = 5e-030
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1 / +1
Query: 1237 IEGEELALDASE 1272
IEGEEL+LDASE
Sbjct: 1 IEGEELSLDASE 36
>gb|BG464782.1|BG464782 EM1_34_B02.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 281
Score = 144 bits (308), Expect(2) = 2e-046
Identities = 61/64 (95%), Positives = 63/64 (98%)
Frame = +1 / +2
Query: 2998 TRLQVVPLLASRSQALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTE 3177
TRLQVVPLLASRSQALRYL VRWG+SVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTE
Sbjct: 2 TRLQVVPLLASRSQALRYLFVRWGLSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTE 181
Query: 3178 KGSE 3189
KGS+
Sbjct: 182 KGSK 193
Score = 123 bits (264), Expect(2) = 4e-037
Identities = 51/63 (80%), Positives = 52/63 (82%)
Frame = +3 / +1
Query: 2997 DKASGCPSASIKVTGTQVSFRALGRICGEHVSDHRGTWRHRSRGDAIRATQDRDRPWRHR 3176
DK SGCP ASIKVTGTQV FRALG ICGEHVSDH GTWR+RSRGDAI TQD RP HR
Sbjct: 1 DKTSGCPPASIKVTGTQVPFRALGPICGEHVSDHWGTWRYRSRGDAIWVTQDCHRPGCHR 180
Query: 3177 EGF 3185
EGF
Sbjct: 181 EGF 189
Score = 122 bits (261), Expect(2) = 6e-036
Identities = 52/63 (82%), Positives = 52/63 (82%)
Frame = +2 / +3
Query: 2999 QGFRLSLC*HQGHRHSGIFPCAGAYLWGTCI*SPGNMATPI*RRCYPGYTRP*SSVASPR 3178
Q FRLS C*HQGHRHSG F CAGAYLWGTCI*S GNMA PI*RRCY GYTR SS SPR
Sbjct: 3 QDFRLSPC*HQGHRHSGTFSCAGAYLWGTCI*SLGNMAIPI*RRCYLGYTRLSSSGVSPR 182
Query: 3179 RVR 3187
RVR
Sbjct: 183 RVR 191
Score = 119 bits (255), Expect(2) = 1e-036
Identities = 51/63 (80%), Positives = 53/63 (84%)
Frame = -3 / -2
Query: 3186 RTLLGDATDDHGLV*PG*HLL*IGVAMFPGDQIHVPHRYAPAHGKIPECL*P*C*QRDNL 3007
RTLLGD DD LV*P *HLL*IG+AMFP DQIHVPHR APAH K+PECL*P*C*Q DNL
Sbjct: 190 RTLLGDTPDDDSLV*PR*HLL*IGIAMFPSDQIHVPHR*APAHEKVPECL*P*C*QGDNL 11
Query: 3006 KPC 2998
K C
Sbjct: 10 KSC 2
Score = 112 bits (239), Expect(2) = 1e-032
Identities = 50/62 (80%), Positives = 53/62 (85%)
Frame = -2 / -1
Query: 3184 NPSR*RHGRSRSCVARIASPLDRCRHVPR*SDTCSPQIRPSARKDT*VPVTLMLAEGQPE 3005
NPSR* GR +SCV +IASPLDR RHVP+*SDTCSPQI PSARK T*VPVTLMLA GQPE
Sbjct: 188 NPSR*HPGR*QSCVTQIASPLDRYRHVPQ*SDTCSPQIGPSARKGT*VPVTLMLAGGQPE 9
Query: 3004 AL 2999
L
Sbjct: 8 VL 3
Score = 65.7 bits (137), Expect(2) = 2e-046
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = +1 / +1
Query: 3166 GVTEKGSEALVRSPGSYKRDDVVPSETPLAAYTTG 3270
G +G EAL+RS GSYKRDDVVP+ETPLAAYTTG
Sbjct: 169 GCHREGFEALLRSSGSYKRDDVVPTETPLAAYTTG 273
Score = 57.4 bits (119), Expect(2) = 1e-036
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = -2 / -2
Query: 3277 SAHQSCTQPRGSQTGRHRPSCSFLGSSPVL 3188
S HQSCTQPRGSQ+GR RPSC+F SS L
Sbjct: 280 SXHQSCTQPRGSQSGRRRPSCNFPSSSAAL 191
Score = 55.1 bits (114), Expect(2) = 4e-037
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +2 / +2
Query: 3188 KHW*GAQEATRGTMSSRLRPPWLRTRLV 3271
K *GA+E TRGT SSRLRPPWLRTRLV
Sbjct: 191 KRC*GAREVTRGTTSSRLRPPWLRTRLV 274
Score = 52.4 bits (108), Expect(2) = 6e-036
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = +3 / +3
Query: 3189 STGEEPRKLQEGRCRPV*DPLGCVHDW* 3272
S EE KLQEGR RP *DPLGCVHDW*
Sbjct: 192 SAAEELGKLQEGRRRPD*DPLGCVHDW* 275
Score = 51.5 bits (106), Expect(2) = 1e-032
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = -3 / -3
Query: 3270 TSRVRSQGGLRRDDIVPLVASWAPHQCF 3187
TSRVRSQGGL RDD+VPLV S AP Q F
Sbjct: 273 TSRVRSQGGLSRDDVVPLVTSRAPQQRF 190
>gb|CW434864.1|CW434864 fsbb001f150m06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f150m06, DNA
sequence
Length = 490
Score = 172 bits (370), Expect(2) = 1e-043
Identities = 68/108 (62%), Positives = 85/108 (78%)
Frame = +1 / +3
Query: 709 TGGQVKYVVELARAMSMMPGVYRVDLFTRQVSSLDVDWSYGEPTEMLCAGSNDGEGMGES 888
T QVKYVVELARA++ GV+RVDL TRQ+S DVDW+YGEP EM+ D +G
Sbjct: 99 TDVQVKYVVELARALAATAGVHRVDLLTRQISCPDVDWTYGEPVEMITHHHADDGDLGSG 278
Query: 889 GGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 1032
GGAYIVR+PCGPRDKYL KE+LWP++ EFVD ALAH+ N+++ALG+Q+
Sbjct: 279 GGAYIVRLPCGPRDKYLPKESLWPHIPEFVDRALAHVTNVARALGDQL 422
Score = 28.6 bits (56), Expect(2) = 1e-043
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1 / +3
Query: 1033 GNGRPVLPYVIHGH 1074
G+ PV PYVIHGH
Sbjct: 447 GSPPPVWPYVIHGH 488
>gb|CW227900.1|CW227900 104_667_11206064_116_37246_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11206064, DNA
sequence
Length = 361
Score = 127 bits (273), Expect(2) = 5e-043
Identities = 53/73 (72%), Positives = 60/73 (82%)
Frame = +1 / +3
Query: 1033 GNGRPVLPYVIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSKEEID 1212
G+ PV PYVIHGHYADA +VAA L+ ALNVPMV+TGHSLGRNKLEQLLK GRM + EI
Sbjct: 141 GSPPPVWPYVIHGHYADAAEVAAHLASALNVPMVMTGHSLGRNKLEQLLKLGRMPRAEIQ 320
Query: 1213 STYKIMRRIEGEE 1251
TY+I RR+E EE
Sbjct: 321 GTYRIARRVEAEE 359
Score = 70.7 bits (148), Expect(2) = 5e-043
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +1 / +3
Query: 919 GPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 1032
GPRDKYL KE+LWP++ EFVD ALAH+ N+++ALG+Q+
Sbjct: 3 GPRDKYLPKESLWPHIPEFVDRALAHVTNVARALGDQL 116
>gb|CW065564.1|CW065564 104_312_10523221_114_30128 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10523221, DNA
sequence
Length = 447
Score = 169 bits (364), Expect(2) = 2e-042
Identities = 70/108 (64%), Positives = 79/108 (73%)
Frame = +1 / -2
Query: 1354 LRARARRGVSCHGRYMPRMVVIPPGMDFSNVVVHEXXXXXXXXXXXXXXLEGASPKSMPP 1533
LR R RRGVSC GRYMPRMVVIPPGMDFS V + + +S K +PP
Sbjct: 446 LRVRRRRGVSCLGRYMPRMVVIPPGMDFSYVDTQDLAADGGGDADLQMIISSSSKKPLPP 267
Query: 1534 IWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANL 1677
IW+EV+RF NPHKPMILALSRPDPKKN+TTL+KA+GE R LRELANL
Sbjct: 266 IWSEVLRFFANPHKPMILALSRPDPKKNVTTLLKAYGESRHLRELANL 123
Score = 26.7 bits (52), Expect(2) = 2e-042
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +1 / -3
Query: 1678 TLIMGNRDDIDD 1713
TLI+GNRDDI++
Sbjct: 37 TLILGNRDDIEE 2
>gb|CW026128.1|CW026128 104_252_10497773_116_30518 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10497773, DNA
sequence
Length = 691
Score = 172 bits (370), Expect(2) = 8e-042
Identities = 73/79 (92%), Positives = 76/79 (96%)
Frame = +1 / +1
Query: 418 KQLELEGIQRISARRKEQEQVRREATEDLAEDLSEGEKGDTIGELAPVETTKKKFQRNFS 597
+QLELEG+QRISARRKEQEQVRREATEDLAEDL EGEK DT+GELAPVET KKKFQRNFS
Sbjct: 226 EQLELEGMQRISARRKEQEQVRREATEDLAEDLDEGEKADTLGELAPVETAKKKFQRNFS 405
Query: 598 DLTVWSDDNKEKKLYIVLI 654
DLTVWSDDNKEKKLYIVLI
Sbjct: 406 DLTVWSDDNKEKKLYIVLI 462
Score = 110 bits (234), Expect(3) = 5e-024
Identities = 51/70 (72%), Positives = 54/70 (77%)
Frame = -3 / -2
Query: 654 DEHNVKLLLLIVVRPDGKVREVPLELLLGRLNRRKLADGVSLLAF*QILGQVXXXXXXXX 475
DEHNVKLLLLIVVRPDG+VREVPLELLLG LNRRKLA+GV LAF QIL QV
Sbjct: 462 DEHNVKLLLLIVVRPDGQVREVPLELLLGCLNRRKLAEGVRFLAFIQILSQVLRRLTAHL 283
Query: 474 XXXLPSCRDS 445
LP+CRDS
Sbjct: 282 LLFLPACRDS 253
Score = 28.1 bits (55), Expect(3) = 5e-024
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / -1
Query: 706 QNHDLVPCF 680
QNHDLVPCF
Sbjct: 691 QNHDLVPCF 665
Score = 26.7 bits (52), Expect(2) = 8e-042
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 645 CAHQRAWSCSWR 680
C Q AWSCSWR
Sbjct: 631 C*VQCAWSCSWR 666
Score = 22.1 bits (42), Expect(3) = 5e-024
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1 / -2
Query: 680 SPRTRPC 660
SPRTRPC
Sbjct: 666 SPRTRPC 646
>gb|CL155022.1|CL155022 104_340_10781811_114_31469_291 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10781811, DNA
sequence
Length = 751
Score = 172 bits (370), Expect = 3e-041
Identities = 73/79 (92%), Positives = 76/79 (96%)
Frame = +1 / -1
Query: 418 KQLELEGIQRISARRKEQEQVRREATEDLAEDLSEGEKGDTIGELAPVETTKKKFQRNFS 597
+QLELEG+QRISARRKEQEQVRREATEDLAEDL EGEK DT+GELAPVET KKKFQRNFS
Sbjct: 406 EQLELEGMQRISARRKEQEQVRREATEDLAEDLDEGEKADTLGELAPVETAKKKFQRNFS 227
Query: 598 DLTVWSDDNKEKKLYIVLI 654
DLTVWSDDNKEKKLYIVLI
Sbjct: 226 DLTVWSDDNKEKKLYIVLI 170
Score = 110 bits (234), Expect = 2e-022
Identities = 51/70 (72%), Positives = 54/70 (77%)
Frame = -3 / +2
Query: 654 DEHNVKLLLLIVVRPDGKVREVPLELLLGRLNRRKLADGVSLLAF*QILGQVXXXXXXXX 475
DEHNVKLLLLIVVRPDG+VREVPLELLLG LNRRKLA+GV LAF QIL QV
Sbjct: 170 DEHNVKLLLLIVVRPDGQVREVPLELLLGCLNRRKLAEGVRFLAFIQILSQVLRRLTAHL 349
Query: 474 XXXLPSCRDS 445
LP+CRDS
Sbjct: 350 LLFLPACRDS 379
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,459,664,371
Number of Sequences: 832831
Number of extensions: 77657343
Number of successful extensions: 579588
Number of sequences better than 1.0e-020: 91
length of database: 163,786,556
effective HSP length: 58
effective length of database: 115,482,358
effective search space used: 128993793886
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)