TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3748389.2.1
(663 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW083680.1|CW083680 104_426_10945318_114_32375_095 Sorgh... 257 9e-091
gb|CW254162.1|CW254162 104_718_11225512_116_35121_062 Sorgh... 206 2e-087
gb|CW454317.1|CW454317 fsbb001f198l06f0 Sorghum methylation... 206 3e-078
gb|CW028127.1|CW028127 104_255_10498907_116_30393 Sorghum m... 212 3e-077
gb|CW083681.1|CW083681 104_426_10945318_116_32439_095 Sorgh... 278 4e-077
gb|BZ367582.1|BZ367582 id05c10.b1 WGS-SbicolorF (JM107 adap... 258 8e-068
gb|CW330768.1|CW330768 104_827_11480551_148_36012_018 Sorgh... 194 5e-060
gb|CL191048.1|CL191048 104_409_10906509_116_32498_085 Sorgh... 203 2e-054
gb|CW364088.1|CW364088 fsbb001f035p16f0 Sorghum methylation... 177 7e-047
gb|CW163446.1|CW163446 104_571_11151466_116_36456_045 Sorgh... 111 9e-046
gb|CW327643.1|CW327643 104_823_11478859_148_35980_074 Sorgh... 135 3e-043
gb|CW203291.1|CW203291 104_629_11185554_116_36915_065 Sorgh... 135 3e-043
gb|CW221425.1|CW221425 104_656_11197899_116_37452_008 Sorgh... 125 4e-041
gb|CW327642.1|CW327642 104_823_11478859_116_35979_074 Sorgh... 126 1e-040
gb|CW039097.1|CW039097 104_271_10505296_115_30388 Sorghum m... 125 9e-040
gb|AC169376.1| Sorghum bicolor clone SB_BBc0046M17, WORKING... 133 2e-038
gb|CW042034.1|CW042034 104_275_10506897_115_30285 Sorghum m... 82 6e-038
gb|CX616312.1|CX616312 GABR1_27_E04.b1_A002 GA- or brassino... 125 8e-038
gb|CW103801.1|CW103801 104_472_11012084_148_34435_070 Sorgh... 113 4e-036
gb|CW330767.1|CW330767 104_827_11480551_116_36011_018 Sorgh... 113 6e-036
gb|CW027654.1|CW027654 104_254_10498637_114_30395 Sorghum m... 101 9e-034
gb|CW396813.1|CW396813 fsbb001f085g19k0 Sorghum methylation... 99 8e-033
gb|CW395662.1|CW395662 fsbb001f083m12k0 Sorghum methylation... 100 8e-033
gb|CW312652.1|CW312652 104_802_11470875_148_35778_006 Sorgh... 93 2e-032
gb|CW089308.1|CW089308 104_434_10948630_114_32602_085 Sorgh... 94 9e-032
gb|CL163087.1|CL163087 104_356_10806883_116_31811_019 Sorgh... 100 2e-030
gb|CW192204.1|CW192204 104_614_11178899_148_36948_040 Sorgh... 74 4e-030
gb|CW466584.1|CW466584 fsbb001f217o04f0 Sorghum methylation... 92 2e-029
gb|CW162435.1|CW162435 104_569_11150941_148_36443_051 Sorgh... 89 2e-029
gb|CW218685.1|CW218685 104_652_11196321_116_37460_041 Sorgh... 91 3e-029
gb|BG558527.1|BG558527 RHIZ2_56_H09.g1_A003 Rhizome2 (RHIZ2... 91 4e-029
gb|CW449831.1|CW449831 fsbb001f188c16f0 Sorghum methylation... 82 5e-029
gb|CW103800.1|CW103800 104_472_11012084_116_34431_070 Sorgh... 125 8e-029
gb|BZ333861.1|BZ333861 hx74f04.g1 WGS-SbicolorF (JM107 adap... 105 1e-028
gb|CW311653.1|CW311653 104_801_11470344_148_36279_092 Sorgh... 92 4e-028
gb|CW140758.1|CW140758 104_531_11135953_116_34924_007 Sorgh... 92 4e-028
gb|CF487063.1|CF487063 POL1_41_B10.g1_A002 Pollen Sorghum b... 102 5e-028
gb|CW409172.1|CW409172 fsbb001f103f24k0 Sorghum methylation... 96 5e-028
gb|CW089259.1|CW089259 104_434_10948601_114_32582_071 Sorgh... 96 5e-028
gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete seq... 81 7e-028
gb|CW110662.1|CW110662 104_483_11103842_116_34518_005 Sorgh... 101 2e-027
gb|AW922847.1|AW922847 DG1_46_A02.g1_A002 Dark Grown 1 (DG1... 93 2e-027
gb|CW447301.1|CW447301 fsbb001f180f18k0 Sorghum methylation... 81 4e-027
gb|CW343186.1|CW343186 104_845_11487282_148_36183_073 Sorgh... 94 1e-026
gb|CW020800.1|CW020800 104_109_10409176_114_30492 Sorghum m... 93 2e-026
gb|CW307346.1|CW307346 104_795_11468092_116_35729_010 Sorgh... 91 3e-026
gb|CW032833.1|CW032833 104_262_10501615_115_30362 Sorghum m... 90 3e-026
gb|CW040361.1|CW040361 104_273_10506094_114_30264 Sorghum m... 91 4e-026
gb|BM323694.1|BM323694 PIC1_22_C02.b1_A002 Pathogen-infecte... 95 4e-026
gb|BM323424.1|BM323424 PIC1_19_B04.b1_A002 Pathogen-infecte... 95 4e-026
gb|CW307347.1|CW307347 104_795_11468092_148_35737_010 Sorgh... 90 5e-026
gb|CX606664.1|CX606664 ANR1_4_G03.b1_A002 Anaerobic roots S... 90 3e-025
gb|CL169524.1|CL169524 104_368_10812693_148_31808_165 Sorgh... 84 4e-025
gb|CL192577.1|CL192577 104_415_10940344_116_32263_056 Sorgh... 84 4e-025
gb|CF480403.1|CF480403 POL1_65_C07.g1_A002 Pollen Sorghum b... 92 5e-025
gb|CW405793.1|CW405793 fsbb001f098i04k0 Sorghum methylation... 84 5e-025
gb|CL193419.1|CL193419 104_417_10940920_116_32282_064 Sorgh... 84 5e-025
gb|CW343185.1|CW343185 104_845_11487282_116_36184_073 Sorgh... 94 5e-025
gb|CW132888.1|CW132888 104_516_11116457_148_34802_073 Sorgh... 84 5e-025
gb|CX607018.1|CX607018 ANR1_6_E11.b1_A002 Anaerobic roots S... 92 7e-025
gb|CW412401.1|CW412401 fsbb001f108a11f0 Sorghum methylation... 92 7e-025
gb|CW051897.1|CW051897 104_292_10515394_115_30287 Sorghum m... 94 7e-025
gb|CW203946.1|CW203946 104_631_11186281_148_36907_003 Sorgh... 94 7e-025
gb|CW191659.1|CW191659 104_613_11178611_148_36940_036 Sorgh... 83 9e-025
gb|BZ336790.1|BZ336790 hz39c04.b1 WGS-SbicolorF (JM107 adap... 84 9e-025
gb|CW268498.1|CW268498 104_739_11401335_116_35308_060 Sorgh... 87 9e-025
gb|CW467620.1|CW467620 fsbb001f219g07f0 Sorghum methylation... 90 1e-024
gb|CW139826.1|CW139826 104_530_11135451_148_34918_014 Sorgh... 82 1e-024
gb|CX614480.1|CX614480 GABR1_14_G09.b1_A002 GA- or brassino... 90 1e-024
gb|CW233504.1|CW233504 104_686_11213464_148_37375_052 Sorgh... 90 1e-024
gb|CW236611.1|CW236611 104_692_11215707_148_37500_006 Sorgh... 90 1e-024
gb|CW233503.1|CW233503 104_686_11213464_116_37376_052 Sorgh... 90 1e-024
gb|CW261570.1|CW261570 104_728_11229584_148_35173_020 Sorgh... 90 1e-024
gb|CX609512.1|CX609512 ANR1_13_D09.b1_A002 Anaerobic roots ... 84 2e-024
gb|CN137262.1|CN137262 OX1_56_E07.b1_A002 Oxidatively-stres... 84 2e-024
gb|CW487792.1|CW487792 fsbb001f253n06k0 Sorghum methylation... 90 2e-024
gb|CW493956.1|CW493956 fsbb001f284p14k0 Sorghum methylation... 84 2e-024
gb|CW093428.1|CW093428 104_456_10999770_148_37471_071 Sorgh... 90 2e-024
gb|CW048391.1|CW048391 104_286_10513341_114_30214 Sorghum m... 84 2e-024
gb|CL183491.1|CL183491 104_396_10898210_116_31924_050 Sorgh... 84 2e-024
gb|CW450734.1|CW450734 fsbb001f189i07k0 Sorghum methylation... 81 3e-024
gb|CL185025.1|CL185025 104_398_10899248_114_32369_020 Sorgh... 91 4e-024
gb|BZ350803.1|BZ350803 ht61a05.g1 WGS-SbicolorF (JM107 adap... 87 4e-024
gb|BZ350869.1|BZ350869 ht61g03.g1 WGS-SbicolorF (JM107 adap... 87 4e-024
gb|CW344135.1|CW344135 104_846_11487797_116_36189_019 Sorgh... 82 6e-024
gb|CW463308.1|CW463308 fsbb001f211n13f0 Sorghum methylation... 96 8e-024
gb|CW236610.1|CW236610 104_692_11215707_116_37501_006 Sorgh... 87 8e-024
gb|CD233065.1|CD233065 SS1_11_B10.g1_A012 Salt-stressed see... 93 1e-023
gb|CW027952.1|CW027952 104_254_10498806_116_30396 Sorghum m... 83 2e-023
gb|CW498961.1|CW498961 fsbb001f293h15k0 Sorghum methylation... 85 2e-023
gb|CF433575.1|CF433575 NIT1_28_H01.b1_A002 Nitrogen-deficie... 92 2e-023
gb|CW231546.1|CW231546 104_680_11211179_116_37341_034 Sorgh... 87 3e-023
gb|CW063958.1|CW063958 104_309_10522296_114_30136 Sorghum m... 80 3e-023
gb|CB925748.1|CB925748 ABA1_23_C10.b1_A012 Abscisic acid-tr... 84 3e-023
gb|CW167896.1|CW167896 104_577_11153849_148_36496_075 Sorgh... 80 3e-023
gb|CW043822.1|CW043822 104_279_10508598_114_30276 Sorghum m... 87 3e-023
gb|CW315654.1|CW315654 104_806_11472478_116_35826_083 Sorgh... 80 3e-023
gb|CW386904.1|CW386904 fsbb001f071a10f0 Sorghum methylation... 82 3e-023
gb|BE598113.1|BE598113 PI1_65_H05.b1_A002 Pathogen induced ... 85 3e-023
gb|CW439239.1|CW439239 fsbb001f157e12k0 Sorghum methylation... 88 4e-023
gb|BE356265.1|BE356265 DG1_123_A04.g1_A002 Dark Grown 1 (DG... 84 4e-023
gb|CW387988.1|CW387988 fsbb001f072j01f0 Sorghum methylation... 88 4e-023
gb|CW412501.1|CW412501 fsbb001f108c15f0 Sorghum methylation... 88 4e-023
gb|CW209554.1|CW209554 104_639_11189310_116_36992_021 Sorgh... 82 5e-023
gb|CD233112.1|CD233112 SS1_11_B09.g1_A012 Salt-stressed see... 90 7e-023
gb|CW491158.1|CW491158 fsbb001f280o13k0 Sorghum methylation... 84 1e-022
gb|CX618036.1|CX618036 GABR1_37_G11.b1_A002 GA- or brassino... 84 2e-022
gb|CW355398.1|CW355398 fsbb001f020a05k0 Sorghum methylation... 80 2e-022
gb|CW437239.1|CW437239 fsbb001f154e05f0 Sorghum methylation... 80 2e-022
gb|CX618359.1|CX618359 GABR1_39_D05.b1_A002 GA- or brassino... 84 2e-022
gb|CW217915.1|CW217915 104_651_11195911_148_37457_026 Sorgh... 80 2e-022
gb|CW029447.1|CW029447 104_257_10499681_116_30402 Sorghum m... 89 3e-022
gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence 63 3e-022
gb|CW187148.1|CW187148 104_605_11166940_116_36720_010 Sorgh... 84 4e-022
gb|CW089309.1|CW089309 104_434_10948630_115_32585_085 Sorgh... 85 5e-022
gb|CW311619.1|CW311619 104_801_11470327_148_36278_028 Sorgh... 84 7e-022
gb|CW461238.1|CW461238 fsbb001f208m21f0 Sorghum methylation... 87 7e-022
gb|CW493408.1|CW493408 fsbb001f284c16f0 Sorghum methylation... 77 7e-022
gb|CW223772.1|CW223772 104_659_11203093_148_37190_051 Sorgh... 84 7e-022
gb|CW483111.1|CW483111 fsbb001f244j08f0 Sorghum methylation... 77 7e-022
gb|BZ347007.1|BZ347007 hw04b01.b1 WGS-SbicolorF (JM107 adap... 83 7e-022
gb|CW326640.1|CW326640 104_822_11478325_148_35966_063 Sorgh... 84 7e-022
gb|CW479719.1|CW479719 fsbb001f238g06k0 Sorghum methylation... 77 7e-022
gb|CW334933.1|CW334933 104_833_11482765_148_36071_053 Sorgh... 88 9e-022
gb|CN129257.1|CN129257 RHOH1_34_H10.b3_A002 Acid- and alkal... 84 1e-021
gb|BZ366309.1|BZ366309 ic96a10.g1 WGS-SbicolorF (JM107 adap... 87 1e-021
gb|CW404739.1|CW404739 fsbb001f097a06k0 Sorghum methylation... 70 2e-021
gb|CW473657.1|CW473657 fsbb001f229c07f0 Sorghum methylation... 83 2e-021
gb|CX621626.1|CX621626 GABR1_59_E11.b1_A002 GA- or brassino... 80 2e-021
gb|CX610524.1|CX610524 ANR1_19_F04.b1_A002 Anaerobic roots ... 81 2e-021
gb|CW263776.1|CW263776 104_732_11230904_148_35236_028 Sorgh... 68 3e-021
gb|CW254163.1|CW254163 104_718_11225512_148_35117_062 Sorgh... 94 3e-021
gb|BZ351665.1|BZ351665 hw05b10.g1 WGS-SbicolorF (JM107 adap... 86 4e-021
gb|CL149078.1|CL149078 104_329_10593534_148_31784_274 Sorgh... 102 5e-021
gb|CB925138.1|CB925138 ABA1_20_B08.b1_A012 Abscisic acid-tr... 102 5e-021
gb|CL187366.1|CL187366 104_402_10900827_116_32436_002 Sorgh... 66 5e-021
gb|CW110223.1|CW110223 104_482_11103569_116_34509_065 Sorgh... 81 6e-021
gb|CW404738.1|CW404738 fsbb001f097a06f0 Sorghum methylation... 68 8e-021
gb|CW051896.1|CW051896 104_292_10515394_115_30190 Sorghum m... 94 8e-021
>gb|CW083680.1|CW083680 104_426_10945318_114_32375_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10945318, DNA
sequence
Length = 571
Score = 257 bits (555), Expect(2) = 9e-091
Identities = 105/111 (94%), Positives = 109/111 (98%)
Frame = +3 / +2
Query: 123 DAAPGQGTGGLPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRG 302
DA PGQGTGGLPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSI+EGLSRG
Sbjct: 239 DAEPGQGTGGLPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSISEGLSRG 418
Query: 303 VTMVLLPLMFDQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMA 455
V MVLLPLMFDQGLNARLL++KKIGIEVER+EDDGTFAPKDIADALRTAMA
Sbjct: 419 VRMVLLPLMFDQGLNARLLVEKKIGIEVERDEDDGTFAPKDIADALRTAMA 571
Score = 246 bits (531), Expect(2) = 3e-087
Identities = 102/111 (91%), Positives = 104/111 (93%)
Frame = -2 / -1
Query: 455 RHGRPQSIRDVFGRERAVVFVPLHLNPDLLIHKKPGVEALIEHQRQQHHRDAPREAFGDG 276
RHGRPQSIRDVFG ERAVVFVPLHL+ DLL+HKKPGVEALIEHQRQQHH DAPREA GDG
Sbjct: 571 RHGRPQSIRDVFGSERAVVFVPLHLDADLLLHKKPGVEALIEHQRQQHHPDAPREALGDG 392
Query: 275 VPAGVGQKPTNRFMSQQPGLRHPAAADQSPAIDTLLEAFRQPARALSGCGV 123
VPAGVGQKPTNRFM QQPGLRHPAAADQSPAIDTLLEAFRQPA ALSG GV
Sbjct: 391 VPAGVGQKPTNRFMGQQPGLRHPAAADQSPAIDTLLEAFRQPACALSGFGV 239
Score = 235 bits (508), Expect(2) = 1e-073
Identities = 101/111 (90%), Positives = 106/111 (95%)
Frame = -3 / -2
Query: 454 AMAVLRASAMSLGANVPSSSFLSTSIPIFLSIRSLALRP*SNISGNSTIVTPRERPSAME 275
AMAVLRASAMSLGANVPSSS LSTS+PIF S RSLALRP*SNISG+STI+TPRERPS ME
Sbjct: 570 AMAVLRASAMSLGANVPSSSSLSTSMPIFFSTRSLALRP*SNISGSSTILTPRERPSEME 391
Query: 274 FQPAWVRNPPTDS*ANSLG*GTQPRQTNPRPLTRSSKPSGNPPVPCPGAAS 122
FQPAWVRNPPTDS A+SLG*GTQPRQTNPRPLTRSSKPSGNPPVPCPG+AS
Sbjct: 390 FQPAWVRNPPTDSWASSLG*GTQPRQTNPRPLTRSSKPSGNPPVPCPGSAS 238
Score = 126 bits (270), Expect(3) = 3e-064
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +1 / +3
Query: 124 TPHPDKARAGCLKASRSVSMAGDWSAAAGCLNPGCWLMNLLVGF*PTPAGTPSPK 288
TP+PDKA+AGC KASRSVSMAGDWSAAAGCLNPGCW MN LVGF*PTPAGTPSP+
Sbjct: 240 TPNPDKAQAGCRKASRSVSMAGDWSAAAGCLNPGCWPMNRLVGF*PTPAGTPSPR 404
Score = 111 bits (238), Expect(3) = 2e-044
Identities = 48/65 (73%), Positives = 48/65 (73%)
Frame = +2 / +1
Query: 164 LRGACQWPGIGLPRLGASTQAVGS*ICWWVSDXXXXXXXXXXXXAGRHDGAVAADVRSGP 343
LRGACQWPGIGLPRLGASTQA G *I WWVSD AGR DGA AADVRSGP
Sbjct: 280 LRGACQWPGIGLPRLGASTQAAGP*IGWWVSDPRRLELHLRGPLAGRQDGAAAADVRSGP 459
Query: 344 QRQAS 358
QRQAS
Sbjct: 460 QRQAS 474
Score = 98.2 bits (208), Expect(2) = 9e-091
Identities = 42/49 (85%), Positives = 43/49 (87%)
Frame = +3 / +2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQGTG 149
SVVYAAFGSEAKLTSAQLQTIALGLEASGLPF+WAFRPPAD G G
Sbjct: 113 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFIWAFRPPADGDAEPGQG 259
Score = 97.3 bits (206), Expect(2) = 3e-087
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = -3 / -2
Query: 148 PVPCPGAASAGGLNAQRNGRPEASKPSAIVWSCALVSFASLPKAAYTTE 2
P P + SAGGLNAQ NGRP+ASKPSAIVWSCALVSFASLPKAAYTT+
Sbjct: 258 PCPGSASPSAGGLNAQMNGRPDASKPSAIVWSCALVSFASLPKAAYTTD 112
Score = 81.3 bits (171), Expect(3) = 3e-064
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = +1 / +3
Query: 346 TPGFLWIRRSGLRWRGTKTTARSRPKTSRML*GRPW 453
TPGFLW RRS RWRGTKTTARS PKTSRML*GRPW
Sbjct: 462 TPGFLWRRRSASRWRGTKTTARSLPKTSRML*GRPW 569
Score = 79.4 bits (167), Expect(4) = 2e-027
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1 / -3
Query: 255 ETHQQIHEPTAWVEAPSRGRPIPGH*HAPRSLQAT 151
ETHQ IH P AWVEAPSRGRPIPGH*HAPRSL AT
Sbjct: 371 ETHQPIHGPAAWVEAPSRGRPIPGH*HAPRSLPAT 267
Score = 77.6 bits (163), Expect(3) = 3e-064
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = +2 / +1
Query: 2 LRRVRGLRQRGEADERAAPNNCARFGGFRPAVPLGIQAAS 121
+RRVRGLRQRGEAD+RAAPNN A FGG RPA+ LG+QAAS
Sbjct: 112 IRRVRGLRQRGEADKRAAPNNRAGFGGVRPAIHLGVQAAS 231
Score = 62.9 bits (131), Expect(2) = 1e-073
Identities = 27/44 (61%), Positives = 29/44 (65%)
Frame = -2 / -1
Query: 134 GCGVGWRPECPEERQAGSLQT*RNCLEXXXXXXXXXAEGRVHDG 3
G VGWRPE P+E QAG LQT R+CLE AEGRVHDG
Sbjct: 244 GVAVGWRPERPDEWQAGRLQTQRDCLELRACQLRLAAEGRVHDG 113
Score = 62.5 bits (130), Expect(3) = 2e-044
Identities = 26/49 (53%), Positives = 28/49 (57%)
Frame = +1 / +3
Query: 4 PSCTRPXXXXXXXXXXXXKQLR*VWRLPACRSSGHSGRQPTPHPDKARA 150
PSCTRP KQ R VWR PAC SSG SGRQPT P+ +A
Sbjct: 114 PSCTRPSAARRS*QARSSKQSRWVWRRPACHSSGRSGRQPTATPNPDKA 260
Score = 48.7 bits (100), Expect(4) = 2e-027
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1 / -3
Query: 453 PWPSSEHPRCLWARTC 406
PWPSSEHPRCLW RTC
Sbjct: 569 PWPSSEHPRCLWERTC 522
Score = 44.6 bits (91), Expect(3) = 2e-044
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2 / +1
Query: 407 HVRAQRHRGCSEDGHG 454
HVR+QRHRGCSEDGHG
Sbjct: 523 HVRSQRHRGCSEDGHG 570
Score = 26.7 bits (52), Expect(4) = 2e-027
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 93 AGRKPPNLAQLFG 55
AGR PPN A+LFG
Sbjct: 203 AGRTPPNPARLFG 165
Score = 23.5 bits (45), Expect(4) = 2e-027
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1 / -3
Query: 357 EAWR*GPD 334
EAWR*GPD
Sbjct: 473 EAWR*GPD 450
>gb|CW254162.1|CW254162 104_718_11225512_116_35121_062 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11225512, DNA
sequence
Length = 666
Score = 206 bits (444), Expect(3) = 2e-087
Identities = 83/109 (76%), Positives = 94/109 (86%)
Frame = +3 / -2
Query: 138 QGTGGLPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVL 317
+G GLPEGFEERV+GRGLVCRGWVPQ R LAHESVGGFLTHAGWNSI EGL+RGV +VL
Sbjct: 497 EGESGLPEGFEERVDGRGLVCRGWVPQARFLAHESVGGFLTHAGWNSIIEGLARGVRLVL 318
Query: 318 LPLMFDQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
LPLMFDQGLNAR L +KKI +EV R+E+DG+FAPKDIA ALR + E +
Sbjct: 317 LPLMFDQGLNARHLTEKKISVEVPRDEEDGSFAPKDIAAALRRVVVEEE 171
Score = 173 bits (372), Expect(3) = 4e-072
Identities = 76/106 (71%), Positives = 85/106 (80%)
Frame = -3 / +1
Query: 457 SAMAVLRASAMSLGANVPSSSFLSTSIPIFLSIRSLALRP*SNISGNSTIVTPRERPSAM 278
S +L+A+AMSLGAN PSSS TS IF S+R LALRP*SNISG+ST +TPR RPS M
Sbjct: 178 STTTLLKAAAMSLGANEPSSSSRGTSTLIFFSVRCLALRP*SNISGSSTSLTPRARPSMM 357
Query: 277 EFQPAWVRNPPTDS*ANSLG*GTQPRQTNPRPLTRSSKPSGNPPVP 140
EFQPAWV+NPPTDS A +L GTQPRQT+PRP TRSSKPSGNP P
Sbjct: 358 EFQPAWVKNPPTDSWAKNLACGTQPRQTSPRPSTRSSKPSGNPLSP 495
Score = 156 bits (335), Expect(3) = 4e-049
Identities = 68/109 (62%), Positives = 80/109 (73%)
Frame = -2 / +3
Query: 458 LRHGRPQSIRDVFGRERAVVFVPLHLNPDLLIHKKPGVEALIEHQRQQHHRDAPREAFGD 279
L H PQS +VFGRERA+ V HL+ LL+ + P VEALIEHQR QH DA EAF D
Sbjct: 177 LHHDPPQSSCNVFGRERAIFLVSRHLDAYLLLRQMPRVEALIEHQR*QHQPDAAGEAFND 356
Query: 278 GVPAGVGQKPTNRFMSQQPGLRHPAAADQSPAIDTLLEAFRQPARALSG 132
GVPAGVGQ+P++RF+ Q+PGL HPAAAD+S A+D LLE FRQ A A G
Sbjct: 357 GVPAGVGQEPSDRFVGQEPGLWHPAAADESAAVDALLETFRQSAFAFVG 503
Score = 94.1 bits (199), Expect(3) = 2e-087
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = +3 / -2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQ 140
SVVY+AFGSEAKLTSAQLQTIALGLEASGLPFLWAFR P DA G+
Sbjct: 626 SVVYSAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRQPVDANEGE 489
Score = 81.7 bits (172), Expect(3) = 4e-072
Identities = 35/45 (77%), Positives = 37/45 (82%)
Frame = -3 / +1
Query: 136 PGAASAGGLNAQRNGRPEASKPSAIVWSCALVSFASLPKAAYTTE 2
P AS G LNA RNGRPEAS+PSA+V SCALVSFASLP A YTTE
Sbjct: 493 PSLASTGCLNAHRNGRPEASRPSAMVCSCALVSFASLPNAEYTTE 627
Score = 76.2 bits (160), Expect(5) = 6e-042
Identities = 34/52 (65%), Positives = 35/52 (67%)
Frame = +1 / -3
Query: 133 PDKARAGCLKASRSVSMAGDWSAAAGCLNPGCWLMNLLVGF*PTPAGTPSPK 288
P KA+A C K SRS S A D SAAAGC PG W NL G *PTPAGTPS K
Sbjct: 502 PTKAKADCRKVSRSASTAADSSAAAGCHRPGSWPTNLSEGS*PTPAGTPSLK 347
Score = 62.9 bits (131), Expect(3) = 2e-087
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +3 / -2
Query: 468 GTRVKELAEVFGNDEANDQCLRDFLRYLSEYIRQHQ 575
G + KELA++FGNDE NDQC+RDFL+ LSEY RQ Q
Sbjct: 158 GDKAKELAKLFGNDEMNDQCVRDFLKCLSEYNRQ*Q 51
Score = 57.0 bits (118), Expect(3) = 4e-072
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -3 / +1
Query: 568 CLMYSDRYRRKSRRH*SLASSFPNTSASSLTLVPS 464
CL+YSDR+ RKSR H*S SSFPN ASSL L P+
Sbjct: 58 CLLYSDRHLRKSRTH*SFISSFPNNLASSLALSPN 162
Score = 54.7 bits (113), Expect(5) = 6e-042
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2 / -1
Query: 2 LRRVRGLRQRGEADERAAPNNCARFGGFRPAVPLGIQA 115
LR V G+RQRGEADE A ++ AR GF PAVP+GIQA
Sbjct: 627 LRCVLGVRQRGEADECTAADHSARSRGFWPAVPVGIQA 514
Score = 47.8 bits (98), Expect(5) = 6e-042
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +1 / -3
Query: 466 TGLGSRNWPRCLEMTRPMISACEISSGICQNTSGS 570
+G+ ++ P CLEMTR MISACEI S +NT+GS
Sbjct: 160 SGIRPKSSPSCLEMTR*MISACEIFSSAYRNTTGS 56
Score = 42.8 bits (87), Expect(3) = 4e-049
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = -2 / +3
Query: 143 ALSGCGVGWRPECPEERQAGSLQT*RNCLEXXXXXXXXXAEGRVHDG 3
A + G+ PECP+ERQA SL+T R L+ AE RVH+G
Sbjct: 486 AFAFVGIDRLPECPQERQARSLETERYGLQLCTRQLRLAAERRVHNG 626
Score = 35.9 bits (72), Expect(5) = 6e-042
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +1 / -3
Query: 367 RRSGLRWRGTKTTARSRPKTSRML*GRPWRR 459
RR R R T+ ARSRPKT ++L*G W R
Sbjct: 268 RR*ASRCRETRKMARSRPKTLQLL*GGSWWR 176
Score = 35.4 bits (71), Expect(3) = 4e-049
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = -2 / +3
Query: 575 LMLPDVF*QIPEEISQALIIGLVISKHLGQFLDPSP 468
L LP VF E+IS ALII LVISK LG+ P
Sbjct: 51 LSLPVVFR*ALEKISHALIIHLVISKQLGELFGLIP 158
Score = 30.9 bits (61), Expect(5) = 6e-042
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / -1
Query: 302 RHDGAVAADVRSGPQRQAS 358
R GA ADVRS PQR+AS
Sbjct: 333 RQAGAATADVRSRPQREAS 277
>gb|CW454317.1|CW454317 fsbb001f198l06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f198l06, DNA
sequence
Length = 694
Score = 206 bits (444), Expect(3) = 3e-078
Identities = 83/109 (76%), Positives = 94/109 (86%)
Frame = +3 / -3
Query: 138 QGTGGLPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVL 317
+G GLPEGFEERV+GRGLVCRGWVPQ R LAHESVGGFLTHAGWNSI EGL+RGV +VL
Sbjct: 608 EGESGLPEGFEERVDGRGLVCRGWVPQARFLAHESVGGFLTHAGWNSIIEGLARGVRLVL 429
Query: 318 LPLMFDQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
LPLMFDQGLNAR L +KKI +EV R+E+DG+FAPKDIA ALR + E +
Sbjct: 428 LPLMFDQGLNARHLTEKKISVEVPRDEEDGSFAPKDIAAALRRVVVEEE 282
Score = 173 bits (372), Expect(3) = 1e-063
Identities = 76/106 (71%), Positives = 85/106 (80%)
Frame = -3 / +1
Query: 457 SAMAVLRASAMSLGANVPSSSFLSTSIPIFLSIRSLALRP*SNISGNSTIVTPRERPSAM 278
S +L+A+AMSLGAN PSSS TS IF S+R LALRP*SNISG+ST +TPR RPS M
Sbjct: 289 STTTLLKAAAMSLGANEPSSSSRGTSTLIFFSVRCLALRP*SNISGSSTSLTPRARPSMM 468
Query: 277 EFQPAWVRNPPTDS*ANSLG*GTQPRQTNPRPLTRSSKPSGNPPVP 140
EFQPAWV+NPPTDS A +L GTQPRQT+PRP TRSSKPSGNP P
Sbjct: 469 EFQPAWVKNPPTDSWAKNLACGTQPRQTSPRPSTRSSKPSGNPLSP 606
Score = 156 bits (335), Expect(3) = 2e-046
Identities = 68/109 (62%), Positives = 80/109 (73%)
Frame = -2 / +3
Query: 458 LRHGRPQSIRDVFGRERAVVFVPLHLNPDLLIHKKPGVEALIEHQRQQHHRDAPREAFGD 279
L H PQS +VFGRERA+ V HL+ LL+ + P VEALIEHQR QH DA EAF D
Sbjct: 288 LHHDPPQSSCNVFGRERAIFLVSRHLDAYLLLRQMPRVEALIEHQR*QHQPDAAGEAFND 467
Query: 278 GVPAGVGQKPTNRFMSQQPGLRHPAAADQSPAIDTLLEAFRQPARALSG 132
GVPAGVGQ+P++RF+ Q+PGL HPAAAD+S A+D LLE FRQ A A G
Sbjct: 468 GVPAGVGQEPSDRFVGQEPGLWHPAAADESAAVDALLETFRQSAFAFVG 614
Score = 76.2 bits (160), Expect(5) = 7e-035
Identities = 34/52 (65%), Positives = 35/52 (67%)
Frame = +1 / -1
Query: 133 PDKARAGCLKASRSVSMAGDWSAAAGCLNPGCWLMNLLVGF*PTPAGTPSPK 288
P KA+A C K SRS S A D SAAAGC PG W NL G *PTPAGTPS K
Sbjct: 613 PTKAKADCRKVSRSASTAADSSAAAGCHRPGSWPTNLSEGS*PTPAGTPSLK 458
Score = 63.4 bits (132), Expect(3) = 3e-078
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +3 / -3
Query: 48 AQLQTIALGLEASGLPFLWAFRPPADAAPGQ 140
AQLQTIALGLEASGLPFLWAFR P DA G+
Sbjct: 692 AQLQTIALGLEASGLPFLWAFRQPVDANEGE 600
Score = 62.9 bits (131), Expect(3) = 3e-078
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +3 / -3
Query: 468 GTRVKELAEVFGNDEANDQCLRDFLRYLSEYIRQHQ 575
G + KELA++FGNDE NDQC+RDFL+ LSEY RQ Q
Sbjct: 269 GDKAKELAKLFGNDEMNDQCVRDFLKCLSEYNRQ*Q 162
Score = 57.0 bits (118), Expect(3) = 1e-063
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -3 / +1
Query: 568 CLMYSDRYRRKSRRH*SLASSFPNTSASSLTLVPS 464
CL+YSDR+ RKSR H*S SSFPN ASSL L P+
Sbjct: 169 CLLYSDRHLRKSRTH*SFISSFPNNLASSLALSPN 273
Score = 53.3 bits (110), Expect(3) = 1e-063
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = -3 / +1
Query: 136 PGAASAGGLNAQRNGRPEASKPSAIVWSCA 47
P AS G LNA RNGRPEAS+PSA+V SCA
Sbjct: 604 PSLASTGCLNAHRNGRPEASRPSAMVCSCA 693
Score = 47.8 bits (98), Expect(5) = 7e-035
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +1 / -1
Query: 466 TGLGSRNWPRCLEMTRPMISACEISSGICQNTSGS 570
+G+ ++ P CLEMTR MISACEI S +NT+GS
Sbjct: 271 SGIRPKSSPSCLEMTR*MISACEIFSSAYRNTTGS 167
Score = 35.9 bits (72), Expect(5) = 7e-035
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +1 / -1
Query: 367 RRSGLRWRGTKTTARSRPKTSRML*GRPWRR 459
RR R R T+ ARSRPKT ++L*G W R
Sbjct: 379 RR*ASRCRETRKMARSRPKTLQLL*GGSWWR 287
Score = 35.4 bits (71), Expect(3) = 2e-046
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = -2 / +3
Query: 575 LMLPDVF*QIPEEISQALIIGLVISKHLGQFLDPSP 468
L LP VF E+IS ALII LVISK LG+ P
Sbjct: 162 LSLPVVFR*ALEKISHALIIHLVISKQLGELFGLIP 269
Score = 34.1 bits (68), Expect(3) = 2e-046
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2 / +3
Query: 143 ALSGCGVGWRPECPEERQAGSLQT*RNCLE 54
A + G+ PECP+ERQA SL+T R L+
Sbjct: 597 AFAFVGIDRLPECPQERQARSLETERYGLQ 686
Score = 30.9 bits (61), Expect(5) = 7e-035
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / -2
Query: 302 RHDGAVAADVRSGPQRQAS 358
R GA ADVRS PQR+AS
Sbjct: 444 RQAGAATADVRSRPQREAS 388
Score = 30.4 bits (60), Expect(5) = 7e-035
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2 / -2
Query: 53 APNNCARFGGFRPAVPLGIQA 115
A ++ AR GF PAVP+GIQA
Sbjct: 687 AADHSARSRGFWPAVPVGIQA 625
>gb|CW028127.1|CW028127 104_255_10498907_116_30393 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10498907, DNA
sequence
Length = 861
Score = 212 bits (457), Expect(2) = 3e-077
Identities = 86/93 (92%), Positives = 90/93 (96%)
Frame = +3 / -2
Query: 123 DAAPGQGTGGLPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRG 302
DA PGQGTGGLPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSI+EGLSRG
Sbjct: 290 DAEPGQGTGGLPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSISEGLSRG 111
Query: 303 VTMVLLPLMFDQGLNARLLMDKKIGIEVERNED 401
V MVLLPLMFDQGLNARLL++KKI IEVER+ED
Sbjct: 110 VRMVLLPLMFDQGLNARLLVEKKIRIEVERDED 12
Score = 209 bits (451), Expect(2) = 3e-076
Identities = 86/93 (92%), Positives = 88/93 (94%)
Frame = -2 / +3
Query: 401 VFVPLHLNPDLLIHKKPGVEALIEHQRQQHHRDAPREAFGDGVPAGVGQKPTNRFMSQQP 222
VFVPLHL+PDLL+HKKPGVEALIEHQRQQHH DAPREA GDGVPAGVGQKPTNRFM QQP
Sbjct: 12 VFVPLHLDPDLLLHKKPGVEALIEHQRQQHHPDAPREALGDGVPAGVGQKPTNRFMGQQP 191
Query: 221 GLRHPAAADQSPAIDTLLEAFRQPARALSGCGV 123
GLRHPAAADQSPAIDTLLEAFRQPA ALSG GV
Sbjct: 192 GLRHPAAADQSPAIDTLLEAFRQPACALSGFGV 290
Score = 194 bits (419), Expect(2) = 2e-061
Identities = 83/93 (89%), Positives = 87/93 (93%)
Frame = -3 / +1
Query: 400 SSFLSTSIPIFLSIRSLALRP*SNISGNSTIVTPRERPSAMEFQPAWVRNPPTDS*ANSL 221
SS LSTSI IF S RSLALRP*SNISG+STI+TPRERPS MEFQPAWVRNPPTDS A+SL
Sbjct: 13 SSSLSTSILIFFSTRSLALRP*SNISGSSTILTPRERPSEMEFQPAWVRNPPTDSWASSL 192
Query: 220 G*GTQPRQTNPRPLTRSSKPSGNPPVPCPGAAS 122
G*GTQPRQTNPRPLTRSSKPSGNPPVPCPG+AS
Sbjct: 193 G*GTQPRQTNPRPLTRSSKPSGNPPVPCPGSAS 291
Score = 126 bits (270), Expect(3) = 5e-054
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +1 / -3
Query: 124 TPHPDKARAGCLKASRSVSMAGDWSAAAGCLNPGCWLMNLLVGF*PTPAGTPSPK 288
TP+PDKA+AGC KASRSVSMAGDWSAAAGCLNPGCW MN LVGF*PTPAGTPSP+
Sbjct: 289 TPNPDKAQAGCRKASRSVSMAGDWSAAAGCLNPGCWPMNRLVGF*PTPAGTPSPR 125
Score = 111 bits (238), Expect(2) = 1e-036
Identities = 48/65 (73%), Positives = 48/65 (73%)
Frame = +2 / -1
Query: 164 LRGACQWPGIGLPRLGASTQAVGS*ICWWVSDXXXXXXXXXXXXAGRHDGAVAADVRSGP 343
LRGACQWPGIGLPRLGASTQA G *I WWVSD AGR DGA AADVRSGP
Sbjct: 249 LRGACQWPGIGLPRLGASTQAAGP*IGWWVSDPRRLELHLRGPLAGRQDGAAAADVRSGP 70
Query: 344 QRQAS 358
QRQAS
Sbjct: 69 QRQAS 55
Score = 98.2 bits (208), Expect(2) = 3e-077
Identities = 42/49 (85%), Positives = 43/49 (87%)
Frame = +3 / -2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQGTG 149
SVVYAAFGSEAKLTSAQLQTIALGLEASGLPF+WAFRPPAD G G
Sbjct: 416 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFIWAFRPPADGDAEPGQG 270
Score = 97.3 bits (206), Expect(2) = 3e-076
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = -3 / +1
Query: 148 PVPCPGAASAGGLNAQRNGRPEASKPSAIVWSCALVSFASLPKAAYTTE 2
P P + SAGGLNAQ NGRP+ASKPSAIVWSCALVSFASLPKAAYTT+
Sbjct: 271 PCPGSASPSAGGLNAQMNGRPDASKPSAIVWSCALVSFASLPKAAYTTD 417
Score = 77.6 bits (163), Expect(3) = 5e-054
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = +2 / -1
Query: 2 LRRVRGLRQRGEADERAAPNNCARFGGFRPAVPLGIQAAS 121
+RRVRGLRQRGEAD+RAAPNN A FGG RPA+ LG+QAAS
Sbjct: 417 IRRVRGLRQRGEADKRAAPNNRAGFGGVRPAIHLGVQAAS 298
Score = 62.9 bits (131), Expect(2) = 2e-061
Identities = 27/44 (61%), Positives = 29/44 (65%)
Frame = -2 / +3
Query: 134 GCGVGWRPECPEERQAGSLQT*RNCLEXXXXXXXXXAEGRVHDG 3
G VGWRPE P+E QAG LQT R+CLE AEGRVHDG
Sbjct: 285 GVAVGWRPERPDEWQAGRLQTQRDCLELRACQLRLAAEGRVHDG 416
Score = 62.5 bits (130), Expect(2) = 1e-036
Identities = 26/49 (53%), Positives = 28/49 (57%)
Frame = +1 / -3
Query: 4 PSCTRPXXXXXXXXXXXXKQLR*VWRLPACRSSGHSGRQPTPHPDKARA 150
PSCTRP KQ R VWR PAC SSG SGRQPT P+ +A
Sbjct: 415 PSCTRPSAARRS*QARSSKQSRWVWRRPACHSSGRSGRQPTATPNPDKA 269
Score = 46.9 bits (96), Expect(3) = 5e-054
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1 / -3
Query: 346 TPGFLWIRRSGLRWRGTKT 402
TPGFLW RRSG RWRGTKT
Sbjct: 67 TPGFLWRRRSGSRWRGTKT 11
>gb|CW083681.1|CW083681 104_426_10945318_116_32439_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10945318, DNA
sequence
Length = 583
Score = 278 bits (602), Expect(2) = 4e-077
Identities = 117/124 (94%), Positives = 121/124 (97%)
Frame = +3 / -3
Query: 210 VPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNARLLMDKKIGIEVE 389
VPQPRLLAHESVGGFLTHAGWNSI+EGLSRGV MVLLPLMFDQGLNARLL++KKIGIEVE
Sbjct: 581 VPQPRLLAHESVGGFLTHAGWNSISEGLSRGVRMVLLPLMFDQGLNARLLVEKKIGIEVE 402
Query: 390 RNEDDGTFAPKDIADALRTAMAENQDGTRVKELAEVFGNDEANDQCLRDFLRYLSEYIRQ 569
R+EDDGTFAPKDIADALRTAMAENQ GTRVKELAEVFGNDEANDQCLRDFLRYLSEY RQ
Sbjct: 401 RDEDDGTFAPKDIADALRTAMAENQGGTRVKELAEVFGNDEANDQCLRDFLRYLSEYSRQ 222
Query: 570 HQG* 581
HQG*
Sbjct: 221 HQG* 210
Score = 267 bits (578), Expect(2) = 5e-074
Identities = 112/125 (89%), Positives = 115/125 (92%)
Frame = -2 / +3
Query: 584 ELTLMLPDVF*QIPEEISQALIIGLVISKHLGQFLDPSPVLVLRHGRPQSIRDVFGRERA 405
EL LMLP VF QIPEEISQALII L+ISKHLGQFLDPSP LVLRHGRPQSIRDVFG ERA
Sbjct: 207 ELPLMLPAVFRQIPEEISQALIIRLIISKHLGQFLDPSPALVLRHGRPQSIRDVFGSERA 386
Query: 404 VVFVPLHLNPDLLIHKKPGVEALIEHQRQQHHRDAPREAFGDGVPAGVGQKPTNRFMSQQ 225
VVFVPLHL+ DLL+HKKPGVEALIEHQRQQHH DAPREA GDGVPAGVGQKPTNRFM QQ
Sbjct: 387 VVFVPLHLDADLLLHKKPGVEALIEHQRQQHHPDAPREALGDGVPAGVGQKPTNRFMGQQ 566
Query: 224 PGLRH 210
PGLRH
Sbjct: 567 PGLRH 581
Score = 254 bits (549), Expect(2) = 3e-069
Identities = 111/123 (90%), Positives = 116/123 (94%)
Frame = -3 / +1
Query: 577 P*CCLMYSDRYRRKSRRH*SLASSFPNTSASSLTLVPSWFSAMAVLRASAMSLGANVPSS 398
P*CCL+YSDRYRRKSRRH*S ASSFPNTSASSLTLVP WFSAMAVLRASAMSLGANVPSS
Sbjct: 214 P*CCLLYSDRYRRKSRRH*SFASSFPNTSASSLTLVPPWFSAMAVLRASAMSLGANVPSS 393
Query: 397 SFLSTSIPIFLSIRSLALRP*SNISGNSTIVTPRERPSAMEFQPAWVRNPPTDS*ANSLG 218
S LSTS+PIF S RSLALRP*SNISG+STI+TPRERPS MEFQPAWVRNPPTDS A+SLG
Sbjct: 394 SSLSTSMPIFFSTRSLALRP*SNISGSSTILTPRERPSEMEFQPAWVRNPPTDSWASSLG 573
Query: 217 *GT 209
*GT
Sbjct: 574 *GT 582
Score = 170 bits (366), Expect(3) = 4e-060
Identities = 69/80 (86%), Positives = 72/80 (90%)
Frame = +1 / -1
Query: 346 TPGFLWIRRSGLRWRGTKTTARSRPKTSRML*GRPWRRTKTGLGSRNWPRCLEMTRPMIS 525
TPGFLW RRS RWRGTKTTARS PKTSRML*GRPWRRTK GLGSRNWPRCLEM R MIS
Sbjct: 445 TPGFLWRRRSASRWRGTKTTARSLPKTSRML*GRPWRRTKAGLGSRNWPRCLEMMRRMIS 266
Query: 526 ACEISSGICQNTSGSIKVSS 585
ACEISSGIC+NT+G+IK SS
Sbjct: 265 ACEISSGICRNTAGNIKGSS 206
Score = 133 bits (284), Expect(4) = 3e-039
Identities = 51/57 (89%), Positives = 51/57 (89%)
Frame = -1 / +2
Query: 576 LDAA*CILTDTGGNLAGTDHWPRHFQTPRPVP*P*SRLGSPPWPSSEHPRCLWARTC 406
LD A CI TDTGGNLAGTDH P HFQTPRPVP*P*SRLGSPPWPSSEHPRCLW RTC
Sbjct: 215 LDVACCIPTDTGGNLAGTDHSPHHFQTPRPVP*P*SRLGSPPWPSSEHPRCLWERTC 385
Score = 125 bits (268), Expect(3) = 2e-044
Identities = 51/58 (87%), Positives = 54/58 (93%)
Frame = +2 / -2
Query: 407 HVRAQRHRGCSEDGHGGEPRRD*GQGTGRGVWK*RGQ*SVPARFPPVSVRIHQAASRL 580
HVR+QRHRGCSEDGHGGEPRRD*GQGTGRGVWK* G+*SVPARFPPVSV I QA SR+
Sbjct: 384 HVRSQRHRGCSEDGHGGEPRRD*GQGTGRGVWK**GE*SVPARFPPVSVGIQQATSRV 211
Score = 72.1 bits (151), Expect(3) = 4e-060
Identities = 33/50 (66%), Positives = 33/50 (66%)
Frame = +2 / -2
Query: 209 GASTQAVGS*ICWWVSDXXXXXXXXXXXXAGRHDGAVAADVRSGPQRQAS 358
GASTQA G *I WWVSD AGR DGA AADVRSGPQRQAS
Sbjct: 582 GASTQAAGP*IGWWVSDPRRLELHLRGPLAGRQDGAAAADVRSGPQRQAS 433
Score = 66.6 bits (139), Expect(3) = 2e-044
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +1 / -1
Query: 208 GCLNPGCWLMNLLVGF*PTPAGTPSPK 288
GCLNPGCW MN LVGF*PTPAGTPSP+
Sbjct: 583 GCLNPGCWPMNRLVGF*PTPAGTPSPR 503
Score = 36.8 bits (74), Expect(4) = 3e-039
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1 / +2
Query: 255 ETHQQIHEPTAWVEAP 208
ETHQ IH P AWVEAP
Sbjct: 536 ETHQPIHGPAAWVEAP 583
Score = 31.8 bits (63), Expect(2) = 5e-074
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / +3
Query: 638 SLPFLCPFLH*H 603
SLPFLCPFLH H
Sbjct: 141 SLPFLCPFLHQH 176
Score = 31.3 bits (62), Expect(2) = 4e-077
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -1
Query: 601 *C*CRKGQRNGSE 639
*C CRKGQRNGSE
Sbjct: 178 *CWCRKGQRNGSE 140
Score = 29.0 bits (57), Expect(3) = 4e-060
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2 / -2
Query: 599 ANVNAEKGKEMVVSHVTLSK 658
+NV AEKGKEM SH K
Sbjct: 180 SNVGAEKGKEMEASHAIEKK 121
Score = 29.0 bits (57), Expect(2) = 3e-069
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3 / +1
Query: 643 VTHYHFFALFCINIS 599
+ +HFFALFC NI+
Sbjct: 136 MARFHFFALFCTNIT 180
Score = 26.3 bits (51), Expect(3) = 2e-044
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3 / -3
Query: 600 LMLMQKRAKKW 632
+ML+QKRAKKW
Sbjct: 179 VMLVQKRAKKW 147
Score = 25.8 bits (50), Expect(4) = 3e-039
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1 / +2
Query: 657 FDSVT*LTTISLPFSALTL 601
F S+ L +ISLPFSA TL
Sbjct: 122 FFSIAWLASISLPFSAPTL 178
Score = 23.5 bits (45), Expect(4) = 3e-039
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1 / +2
Query: 357 EAWR*GPD 334
EAWR*GPD
Sbjct: 434 EAWR*GPD 457
>gb|BZ367582.1|BZ367582 id05c10.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id05c10 5', DNA sequence
Length = 725
Score = 258 bits (557), Expect = 8e-068
Identities = 103/146 (70%), Positives = 123/146 (84%)
Frame = +3 / +3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQGTGGLPEGFEERVN 182
SVVY AFGSEAKLTSAQL +ALGLEA G+PFLWA+R PAD+ GLPEGFEERV+
Sbjct: 288 SVVYVAFGSEAKLTSAQLHAVALGLEAFGVPFLWAYRAPADSDASGSAAGLPEGFEERVS 467
Query: 183 GRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNARLLM 362
G GLVCRGW+PQ RLLAH SVGGF+THAGW S+AEGL+RGV +V+LPL+FD GLNAR L+
Sbjct: 468 GWGLVCRGWLPQARLLAHRSVGGFVTHAGWGSVAEGLARGVRLVMLPLLFDHGLNARHLV 647
Query: 363 DKKIGIEVERNEDDGTFAPKDIADAL 440
+KK+G+EV R+EDDG+F +D+A AL
Sbjct: 648 EKKLGVEVARDEDDGSFTAEDVAAAL 725
Score = 203 bits (438), Expect = 2e-051
Identities = 96/146 (65%), Positives = 106/146 (72%)
Frame = -3 / -2
Query: 439 RASAMSLGANVPSSSFLSTSIPIFLSIRSLALRP*SNISGNSTIVTPRERPSAMEFQPAW 260
RA+A S N PSSS +TS P F S R LALRP SN SG+ T +TPR RPSA E QPA
Sbjct: 724 RAAATSSAVNEPSSSSRATSTPNFFSTRCLALRPWSNRSGSITSLTPRARPSATEPQPAC 545
Query: 259 VRNPPTDS*ANSLG*GTQPRQTNPRPLTRSSKPSGNPPVPCPGAASAGGLNAQRNGRPEA 80
V NPPTD A SL *G+QPRQT+P+PLTRSSKPSGNP + SAG L AQRNG P+A
Sbjct: 544 VTNPPTDLCARSLA*GSQPRQTSPQPLTRSSKPSGNPAALPLASESAGALYAQRNGTPKA 365
Query: 79 SKPSAIVWSCALVSFASLPKAAYTTE 2
S+PSA SCALVS ASLPKA YTTE
Sbjct: 364 SRPSATACSCALVSLASLPKATYTTE 287
Score = 184 bits (397), Expect = 9e-046
Identities = 81/146 (55%), Positives = 98/146 (67%)
Frame = -2 / -1
Query: 440 QSIRDVFGRERAVVFVPLHLNPDLLIHKKPGVEALIEHQRQQHHRDAPREAFGDGVPAGV 261
QS +VF RERA+V +P HL+ LL+H+ PGVEA++E +RQ H DA REA D PAGV
Sbjct: 725 QSSCNVFSRERAIVLIPCHLDAQLLLHQMPGVEAMVEQKRQHH*PDAAREALRDRAPAGV 546
Query: 260 GQKPTNRFMSQQPGLRHPAAADQSPAIDTLLEAFRQPARALSGCGVGWRPECPEERQAGS 81
+P +R + Q+PGLR PAAAD+SPA D LLEAFRQP A + GV RP CPEER A S
Sbjct: 545 RHEPPDRSVCQEPGLRQPAAADESPAADPLLEAFRQPGCAATRVGVRRRPVCPEERHAES 366
Query: 80 LQT*RNCLEXXXXXXXXXAEGRVHDG 3
LQ R C++ AEG VHDG
Sbjct: 365 LQAERYCMQLCARQLGFAAEGHVHDG 288
Score = 105 bits (223), Expect(2) = 9e-028
Identities = 51/94 (54%), Positives = 55/94 (58%)
Frame = +1 / +1
Query: 1 APSCTRPXXXXXXXXXXXXKQLR*VWRLPACRSSGHSGRQPTPHPDKARAGCLKASRSVS 180
APSCT P Q R WRL ACRSSGH+GR+ TP A+ GC KASRS S
Sbjct: 286 APSCTWPSAAKPS*RAHSCMQ*RSAWRLSACRSSGHTGRRRTPTRVAAQPGCRKASRSGS 465
Query: 181 MAGDWSAAAGCLNPGCWLMNLLVGF*PTPAGTPS 282
AGD SAAAGCL PG W + G * TPAG S
Sbjct: 466 AAGDSSAAAGCLRPGSWHTDRSGGS*RTPAGALS 567
Score = 39.6 bits (80), Expect(2) = 9e-028
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1 / +1
Query: 346 TPGFLWIRRSGLRWRGTKTTARSRPKTSRML 438
TPG W R RW G +T ARSR KT ++L
Sbjct: 631 TPGIWWRRSWASRWHGMRTMARSRLKTLQLL 723
>gb|CW330768.1|CW330768 104_827_11480551_148_36012_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480551, DNA
sequence
Length = 740
Score = 194 bits (418), Expect(2) = 5e-060
Identities = 76/118 (64%), Positives = 95/118 (80%)
Frame = +3 / +3
Query: 111 RPPADAAPGQGTGGLPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEG 290
R PAD+ GLPEGFEERV+G GLVCRGW+PQ RLLAH SVGGF+THAGW S+AEG
Sbjct: 3 RAPADSDASGSAAGLPEGFEERVSGWGLVCRGWLPQARLLAHRSVGGFVTHAGWGSVAEG 182
Query: 291 LSRGVTMVLLPLMFDQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
L+RGV +V+LPL+FD GLNAR L++KK+G+EV R+EDDG+F +D+A ALR M ++
Sbjct: 183 LARGVRLVMLPLLFDHGLNARHLVEKKLGVEVARDEDDGSFTAEDVAAALRRVMVGDE 356
Score = 152 bits (327), Expect(2) = 1e-044
Identities = 66/117 (56%), Positives = 81/117 (69%)
Frame = -2 / -1
Query: 461 VLRHGRPQSIRDVFGRERAVVFVPLHLNPDLLIHKKPGVEALIEHQRQQHHRDAPREAFG 282
V H PQS +VF RERA+V +P HL+ LL+H+ PGVEA++E +RQ H DA REA
Sbjct: 353 VPHHDPPQSSCNVFSRERAIVLIPCHLDAQLLLHQMPGVEAMVEQKRQHH*PDAAREALR 174
Query: 281 DGVPAGVGQKPTNRFMSQQPGLRHPAAADQSPAIDTLLEAFRQPARALSGCGVGWRP 111
D PAGV +P +R + Q+PGLR PAAAD+SPA D LLEAFRQP A + GV RP
Sbjct: 173 DRAPAGVRHEPPDRSVCQEPGLRQPAAADESPAADPLLEAFRQPGCAATRVGVRRRP 3
Score = 147 bits (316), Expect(2) = 6e-039
Identities = 71/114 (62%), Positives = 80/114 (70%)
Frame = -3 / -2
Query: 451 MAVLRASAMSLGANVPSSSFLSTSIPIFLSIRSLALRP*SNISGNSTIVTPRERPSAMEF 272
M +LRA+A S N PSSS +TS P F S R LALRP SN SG+ T +TPR RPSA E
Sbjct: 343 MTLLRAAATSSAVNEPSSSSRATSTPNFFSTRCLALRPWSNRSGSITSLTPRARPSATEP 164
Query: 271 QPAWVRNPPTDS*ANSLG*GTQPRQTNPRPLTRSSKPSGNPPVPCPGAASAGGL 110
QPA V NPPTD A SL *G+QPRQT+P+PLTRSSKPSGNP + SAG L
Sbjct: 163 QPACVTNPPTDLCARSLA*GSQPRQTSPQPLTRSSKPSGNPAALPLASESAGAL 2
Score = 67.5 bits (141), Expect(3) = 1e-025
Identities = 33/58 (56%), Positives = 37/58 (63%)
Frame = +1 / +1
Query: 109 SGRQPTPHPDKARAGCLKASRSVSMAGDWSAAAGCLNPGCWLMNLLVGF*PTPAGTPS 282
+GR+ TP A+ GC KASRS S AGD SAAAGCL PG W + G * TPAG S
Sbjct: 1 TGRRRTPTRVAAQPGCRKASRSGSAAGDSSAAAGCLRPGSWHTDRSGGS*RTPAGALS 174
Score = 58.3 bits (121), Expect(2) = 5e-060
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +3 / +3
Query: 468 GTRVKELAEVFGNDEANDQCLRDFLRYLSEY 560
G + +ELA+V GNDE NDQC+RDFLR LSEY
Sbjct: 369 GAKAQELAQVVGNDEVNDQCVRDFLRCLSEY 461
Score = 48.7 bits (100), Expect(2) = 1e-044
Identities = 22/32 (68%), Positives = 22/32 (68%)
Frame = -3 / -2
Query: 559 YSDRYRRKSRRH*SLASSFPNTSASSLTLVPS 464
YSDR RRKSR H*S SSFP T ASS PS
Sbjct: 460 YSDRQRRKSRTH*SFTSSFPTT*ASSWAFAPS 365
Score = 48.7 bits (100), Expect(3) = 1e-025
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = +1 / +1
Query: 346 TPGFLWIRRSGLRWRGTKTTARSRPKTSRML*GRPWRRTK 465
TPG W R RW G +T ARSR KT ++L*G W TK
Sbjct: 238 TPGIWWRRSWASRWHGMRTMARSRLKTLQLL*GGSWWGTK 357
Score = 38.6 bits (78), Expect(3) = 1e-025
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1 / +1
Query: 502 EMTRPMISACEISSGICQNTSGSIKVSSSPFR 597
EMT+ MISACEISS C+NT+ + S+ R
Sbjct: 403 EMTK*MISACEISSAACRNTAPAAAGSNKESR 498
Score = 34.5 bits (69), Expect(2) = 6e-039
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -2 / -1
Query: 560 VF*QIPEEISQALIIGLVISKHLGQFLDPSPVLV 459
VF Q EEIS ALII VIS +L + L P L+
Sbjct: 461 VFRQAAEEISHALIIHFVISDYLSELLGLCPELL 360
>gb|CL191048.1|CL191048 104_409_10906509_116_32498_085 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10906509, DNA
sequence
Length = 655
Score = 203 bits (437), Expect(2) = 2e-054
Identities = 86/91 (94%), Positives = 89/91 (97%)
Frame = +3 / -3
Query: 309 MVLLPLMFDQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQDGTRVKEL 488
MVLLPLMFDQGLNARLL++KKIGIEVER+EDDGTFAPKDIADALRTAMAENQ GTRVKEL
Sbjct: 650 MVLLPLMFDQGLNARLLVEKKIGIEVERDEDDGTFAPKDIADALRTAMAENQGGTRVKEL 471
Query: 489 AEVFGNDEANDQCLRDFLRYLSEYIRQHQG* 581
AEVFGNDEANDQCLRDFLRYLSEY RQHQG*
Sbjct: 470 AEVFGNDEANDQCLRDFLRYLSEYSRQHQG* 378
Score = 193 bits (416), Expect(2) = 8e-052
Identities = 82/92 (89%), Positives = 85/92 (92%)
Frame = -2 / +3
Query: 584 ELTLMLPDVF*QIPEEISQALIIGLVISKHLGQFLDPSPVLVLRHGRPQSIRDVFGRERA 405
EL LMLP VF QIPEEISQALII L+ISKHLGQFLDPSP LVLRHGRPQSIRDVFG ERA
Sbjct: 375 ELPLMLPAVFRQIPEEISQALIIRLIISKHLGQFLDPSPALVLRHGRPQSIRDVFGSERA 554
Query: 404 VVFVPLHLNPDLLIHKKPGVEALIEHQRQQHH 309
VVFVPLHL+ DLL+HKKPGVEALIEHQRQQHH
Sbjct: 555 VVFVPLHLDADLLLHKKPGVEALIEHQRQQHH 650
Score = 185 bits (398), Expect(2) = 2e-048
Identities = 82/91 (90%), Positives = 86/91 (94%)
Frame = -3 / +1
Query: 577 P*CCLMYSDRYRRKSRRH*SLASSFPNTSASSLTLVPSWFSAMAVLRASAMSLGANVPSS 398
P*CCL+YSDRYRRKSRRH*S ASSFPNTSASSLTLVP WFSAMAVLRASAMSLGANVPSS
Sbjct: 382 P*CCLLYSDRYRRKSRRH*SFASSFPNTSASSLTLVPPWFSAMAVLRASAMSLGANVPSS 561
Query: 397 SFLSTSIPIFLSIRSLALRP*SNISGNSTIV 305
S LSTS+PIF S RSLALRP*SNISG+STI+
Sbjct: 562 SSLSTSMPIFFSTRSLALRP*SNISGSSTIL 654
Score = 170 bits (366), Expect(3) = 3e-050
Identities = 69/80 (86%), Positives = 72/80 (90%)
Frame = +1 / -1
Query: 346 TPGFLWIRRSGLRWRGTKTTARSRPKTSRML*GRPWRRTKTGLGSRNWPRCLEMTRPMIS 525
TPGFLW RRS RWRGTKTTARS PKTSRML*GRPWRRTK GLGSRNWPRCLEM R MIS
Sbjct: 613 TPGFLWRRRSASRWRGTKTTARSLPKTSRML*GRPWRRTKAGLGSRNWPRCLEMMRRMIS 434
Query: 526 ACEISSGICQNTSGSIKVSS 585
ACEISSGIC+NT+G+IK SS
Sbjct: 433 ACEISSGICRNTAGNIKGSS 374
Score = 133 bits (284), Expect(3) = 1e-033
Identities = 51/57 (89%), Positives = 51/57 (89%)
Frame = -1 / +2
Query: 576 LDAA*CILTDTGGNLAGTDHWPRHFQTPRPVP*P*SRLGSPPWPSSEHPRCLWARTC 406
LD A CI TDTGGNLAGTDH P HFQTPRPVP*P*SRLGSPPWPSSEHPRCLW RTC
Sbjct: 383 LDVACCIPTDTGGNLAGTDHSPHHFQTPRPVP*P*SRLGSPPWPSSEHPRCLWERTC 553
Score = 125 bits (268), Expect(2) = 6e-030
Identities = 51/58 (87%), Positives = 54/58 (93%)
Frame = +2 / -2
Query: 407 HVRAQRHRGCSEDGHGGEPRRD*GQGTGRGVWK*RGQ*SVPARFPPVSVRIHQAASRL 580
HVR+QRHRGCSEDGHGGEPRRD*GQGTGRGVWK* G+*SVPARFPPVSV I QA SR+
Sbjct: 552 HVRSQRHRGCSEDGHGGEPRRD*GQGTGRGVWK**GE*SVPARFPPVSVGIQQATSRV 379
Score = 39.1 bits (79), Expect(3) = 3e-050
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +2 / -2
Query: 308 DGAVAADVRSGPQRQAS 358
DGA AADVRSGPQRQAS
Sbjct: 651 DGAAAADVRSGPQRQAS 601
Score = 31.8 bits (63), Expect(2) = 8e-052
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / +3
Query: 638 SLPFLCPFLH*H 603
SLPFLCPFLH H
Sbjct: 309 SLPFLCPFLHQH 344
Score = 31.3 bits (62), Expect(2) = 2e-054
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -1
Query: 601 *C*CRKGQRNGSE 639
*C CRKGQRNGSE
Sbjct: 346 *CWCRKGQRNGSE 308
Score = 29.0 bits (57), Expect(3) = 3e-050
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2 / -2
Query: 599 ANVNAEKGKEMVVSHVTLSK 658
+NV AEKGKEM SH K
Sbjct: 348 SNVGAEKGKEMEASHAIEKK 289
Score = 29.0 bits (57), Expect(2) = 2e-048
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3 / +1
Query: 643 VTHYHFFALFCINIS 599
+ +HFFALFC NI+
Sbjct: 304 MARFHFFALFCTNIT 348
Score = 26.3 bits (51), Expect(2) = 6e-030
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3 / -3
Query: 600 LMLMQKRAKKW 632
+ML+QKRAKKW
Sbjct: 347 VMLVQKRAKKW 315
Score = 25.8 bits (50), Expect(3) = 1e-033
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1 / +2
Query: 657 FDSVT*LTTISLPFSALTL 601
F S+ L +ISLPFSA TL
Sbjct: 290 FFSIAWLASISLPFSAPTL 346
Score = 23.5 bits (45), Expect(3) = 1e-033
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1 / +2
Query: 357 EAWR*GPD 334
EAWR*GPD
Sbjct: 602 EAWR*GPD 625
>gb|CW364088.1|CW364088 fsbb001f035p16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f035p16, DNA
sequence
Length = 436
Score = 177 bits (381), Expect(2) = 7e-047
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +3 / -1
Query: 342 LNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQDGTRVKELAEVFGNDEAND 521
LNARLL++KKIGIEVER+EDDGTFAPKDIADALRTAMAENQ GTRVKELAEVFGNDEAND
Sbjct: 436 LNARLLVEKKIGIEVERDEDDGTFAPKDIADALRTAMAENQGGTRVKELAEVFGNDEAND 257
Query: 522 QCLRDFLRYLSEYIRQHQG* 581
QCLRDFLRYLSEY RQHQG*
Sbjct: 256 QCLRDFLRYLSEYSRQHQG* 197
Score = 170 bits (366), Expect(2) = 4e-044
Identities = 69/80 (86%), Positives = 72/80 (90%)
Frame = +1 / -2
Query: 346 TPGFLWIRRSGLRWRGTKTTARSRPKTSRML*GRPWRRTKTGLGSRNWPRCLEMTRPMIS 525
TPGFLW RRS RWRGTKTTARS PKTSRML*GRPWRRTK GLGSRNWPRCLEM R MIS
Sbjct: 432 TPGFLWRRRSASRWRGTKTTARSLPKTSRML*GRPWRRTKAGLGSRNWPRCLEMMRRMIS 253
Query: 526 ACEISSGICQNTSGSIKVSS 585
ACEISSGIC+NT+G+IK SS
Sbjct: 252 ACEISSGICRNTAGNIKGSS 193
Score = 165 bits (355), Expect(2) = 2e-043
Identities = 71/81 (87%), Positives = 74/81 (91%)
Frame = -2 / +2
Query: 584 ELTLMLPDVF*QIPEEISQALIIGLVISKHLGQFLDPSPVLVLRHGRPQSIRDVFGRERA 405
EL LMLP VF QIPEEISQALII L+ISKHLGQFLDPSP LVLRHGRPQSIRDVFG ERA
Sbjct: 194 ELPLMLPAVFRQIPEEISQALIIRLIISKHLGQFLDPSPALVLRHGRPQSIRDVFGSERA 373
Query: 404 VVFVPLHLNPDLLIHKKPGVE 342
VVFVPLHL+ DLL+HKKPGVE
Sbjct: 374 VVFVPLHLDADLLLHKKPGVE 436
Score = 161 bits (346), Expect(2) = 2e-041
Identities = 71/78 (91%), Positives = 73/78 (93%)
Frame = -3 / +3
Query: 577 P*CCLMYSDRYRRKSRRH*SLASSFPNTSASSLTLVPSWFSAMAVLRASAMSLGANVPSS 398
P*CCL+YSDRYRRKSRRH*S ASSFPNTSASSLTLVP WFSAMAVLRASAMSLGANVPSS
Sbjct: 201 P*CCLLYSDRYRRKSRRH*SFASSFPNTSASSLTLVPPWFSAMAVLRASAMSLGANVPSS 380
Query: 397 SFLSTSIPIFLSIRSLAL 344
S LSTS+PIF S RSLAL
Sbjct: 381 SSLSTSMPIFFSTRSLAL 434
Score = 133 bits (284), Expect(2) = 6e-032
Identities = 51/57 (89%), Positives = 51/57 (89%)
Frame = -1 / +1
Query: 576 LDAA*CILTDTGGNLAGTDHWPRHFQTPRPVP*P*SRLGSPPWPSSEHPRCLWARTC 406
LD A CI TDTGGNLAGTDH P HFQTPRPVP*P*SRLGSPPWPSSEHPRCLW RTC
Sbjct: 202 LDVACCIPTDTGGNLAGTDHSPHHFQTPRPVP*P*SRLGSPPWPSSEHPRCLWERTC 372
Score = 125 bits (268), Expect(2) = 6e-030
Identities = 51/58 (87%), Positives = 54/58 (93%)
Frame = +2 / -3
Query: 407 HVRAQRHRGCSEDGHGGEPRRD*GQGTGRGVWK*RGQ*SVPARFPPVSVRIHQAASRL 580
HVR+QRHRGCSEDGHGGEPRRD*GQGTGRGVWK* G+*SVPARFPPVSV I QA SR+
Sbjct: 371 HVRSQRHRGCSEDGHGGEPRRD*GQGTGRGVWK**GE*SVPARFPPVSVGIQQATSRV 198
Score = 31.8 bits (63), Expect(2) = 2e-043
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / +2
Query: 638 SLPFLCPFLH*H 603
SLPFLCPFLH H
Sbjct: 128 SLPFLCPFLHQH 163
Score = 31.3 bits (62), Expect(2) = 7e-047
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -2
Query: 601 *C*CRKGQRNGSE 639
*C CRKGQRNGSE
Sbjct: 165 *CWCRKGQRNGSE 127
Score = 29.0 bits (57), Expect(2) = 4e-044
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2 / -3
Query: 599 ANVNAEKGKEMVVSHVTLSK 658
+NV AEKGKEM SH K
Sbjct: 167 SNVGAEKGKEMEASHAIEKK 108
Score = 29.0 bits (57), Expect(2) = 2e-041
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3 / +3
Query: 643 VTHYHFFALFCINIS 599
+ +HFFALFC NI+
Sbjct: 123 MARFHFFALFCTNIT 167
Score = 26.3 bits (51), Expect(2) = 6e-030
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3 / -1
Query: 600 LMLMQKRAKKW 632
+ML+QKRAKKW
Sbjct: 166 VMLVQKRAKKW 134
Score = 25.8 bits (50), Expect(2) = 6e-032
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1 / +1
Query: 657 FDSVT*LTTISLPFSALTL 601
F S+ L +ISLPFSA TL
Sbjct: 109 FFSIAWLASISLPFSAPTL 165
>gb|CW163446.1|CW163446 104_571_11151466_116_36456_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151466, DNA
sequence
Length = 626
Score = 111 bits (236), Expect(2) = 9e-046
Identities = 42/48 (87%), Positives = 44/48 (91%)
Frame = +3 / +3
Query: 138 QGTGGLPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSI 281
+G GLPEGFEERV+GRGLVCRGWVPQ R LAHESVGGFLTHAGWNSI
Sbjct: 480 EGESGLPEGFEERVDGRGLVCRGWVPQARFLAHESVGGFLTHAGWNSI 623
Score = 94.1 bits (199), Expect(2) = 9e-046
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = +3 / +3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQ 140
SVVY+AFGSEAKLTSAQLQTIALGLEASGLPFLWAFR P DA G+
Sbjct: 351 SVVYSAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRQPVDANEGE 488
Score = 92.7 bits (196), Expect(2) = 1e-036
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = -3 / -2
Query: 280 MEFQPAWVRNPPTDS*ANSLG*GTQPRQTNPRPLTRSSKPSGNPPVP 140
MEFQPAWV+NPPTDS A +L GTQPRQT+PRP TRSSKPSGNP P
Sbjct: 622 MEFQPAWVKNPPTDSWAKNLACGTQPRQTSPRPSTRSSKPSGNPLSP 482
Score = 84.9 bits (179), Expect(2) = 1e-022
Identities = 34/50 (68%), Positives = 41/50 (82%)
Frame = -2 / -1
Query: 281 DGVPAGVGQKPTNRFMSQQPGLRHPAAADQSPAIDTLLEAFRQPARALSG 132
DGVPAGVGQ+P++RF+ Q+PGL HPAAAD+S A+D LLE FRQ A A G
Sbjct: 623 DGVPAGVGQEPSDRFVGQEPGLWHPAAADESAAVDALLETFRQSAFAFVG 474
Score = 81.7 bits (172), Expect(2) = 1e-036
Identities = 35/45 (77%), Positives = 37/45 (82%)
Frame = -3 / -2
Query: 136 PGAASAGGLNAQRNGRPEASKPSAIVWSCALVSFASLPKAAYTTE 2
P AS G LNA RNGRPEAS+PSA+V SCALVSFASLP A YTTE
Sbjct: 484 PSLASTGCLNAHRNGRPEASRPSAMVCSCALVSFASLPNAEYTTE 350
Score = 75.3 bits (158), Expect(2) = 2e-023
Identities = 33/50 (66%), Positives = 34/50 (68%)
Frame = +1 / +1
Query: 133 PDKARAGCLKASRSVSMAGDWSAAAGCLNPGCWLMNLLVGF*PTPAGTPS 282
P KA+A C K SRS S A D SAAAGC PG W NL G *PTPAGTPS
Sbjct: 475 PTKAKADCRKVSRSASTAADSSAAAGCHRPGSWPTNLSEGS*PTPAGTPS 624
Score = 54.7 bits (113), Expect(2) = 2e-023
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2 / +2
Query: 2 LRRVRGLRQRGEADERAAPNNCARFGGFRPAVPLGIQA 115
LR V G+RQRGEADE A ++ AR GF PAVP+GIQA
Sbjct: 350 LRCVLGVRQRGEADECTAADHSARSRGFWPAVPVGIQA 463
Score = 42.8 bits (87), Expect(2) = 1e-022
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = -2 / -1
Query: 143 ALSGCGVGWRPECPEERQAGSLQT*RNCLEXXXXXXXXXAEGRVHDG 3
A + G+ PECP+ERQA SL+T R L+ AE RVH+G
Sbjct: 491 AFAFVGIDRLPECPQERQARSLETERYGLQLCTRQLRLAAERRVHNG 351
>gb|CW327643.1|CW327643 104_823_11478859_148_35980_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478859, DNA
sequence
Length = 719
Score = 135 bits (290), Expect(2) = 3e-043
Identities = 53/102 (51%), Positives = 71/102 (69%)
Frame = +3 / -1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP GFE+R GRGLV GWVPQ R+LAH +VG FLTH GW S EGL G +V+LP +
Sbjct: 419 LPAGFEDRTRGRGLVWPGWVPQVRVLAHAAVGAFLTHCGWGSTVEGLVLGHPLVMLPFVV 240
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAE 458
DQG+ AR + ++ +G+EV R+E DG+F +A+A+R + E
Sbjct: 239 DQGIIARTMAERGVGVEVARDESDGSFGRDGVAEAVRRVVVE 114
Score = 61.1 bits (127), Expect(2) = 3e-043
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +3 / -1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPA 122
SV+Y A GSEA LT+ L +ALGLE +G+ FLWAFR PA
Sbjct: 581 SVIYVALGSEAPLTAKTLHELALGLELAGVRFLWAFRKPA 462
>gb|CW203291.1|CW203291 104_629_11185554_116_36915_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11185554, DNA
sequence
Length = 665
Score = 135 bits (290), Expect(2) = 3e-043
Identities = 53/102 (51%), Positives = 71/102 (69%)
Frame = +3 / +1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP GFE+R GRGLV GWVPQ R+LAH +VG FLTH GW S EGL G +V+LP +
Sbjct: 229 LPAGFEDRTRGRGLVWPGWVPQVRVLAHAAVGAFLTHCGWGSTVEGLVLGHPLVMLPFVV 408
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAE 458
DQG+ AR + ++ +G+EV R+E DG+F +A+A+R + E
Sbjct: 409 DQGIIARTMAERGVGVEVARDESDGSFGRDGVAEAVRRVVVE 534
Score = 61.1 bits (127), Expect(2) = 3e-043
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +3 / +1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPA 122
SV+Y A GSEA LT+ L +ALGLE +G+ FLWAFR PA
Sbjct: 67 SVIYVALGSEAPLTAKTLHELALGLELAGVRFLWAFRKPA 186
>gb|CW221425.1|CW221425 104_656_11197899_116_37452_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197899, DNA
sequence
Length = 646
Score = 125 bits (268), Expect(3) = 4e-041
Identities = 52/104 (50%), Positives = 67/104 (64%)
Frame = +3 / +3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP GFE R G LV GWVPQ +LAH +VG FLTH GW S E L G +V+LP +
Sbjct: 168 LPAGFEGRTRGHALVWSGWVPQVAVLAHAAVGAFLTHCGWGSTIESLVFGRPLVMLPFVV 347
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
DQGL AR + ++ +G+EV R+E DG+F +A A+R+ M E Q
Sbjct: 348 DQGLIARTMAERGVGVEVARDEVDGSFGRDGVAAAVRSVMVEEQ 479
Score = 59.3 bits (123), Expect(3) = 4e-041
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +3 / +3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPA 122
S +Y A GSEA LT++ L +ALGLE +G+ FLWAFR P+
Sbjct: 6 STIYVALGSEAPLTASNLHELALGLELAGVRFLWAFRKPS 125
Score = 22.6 bits (43), Expect(3) = 4e-041
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 476 GQGTGRGVWK*RGQ 517
G GTGRGV + RG+
Sbjct: 467 GGGTGRGVRQQRGE 508
>gb|CW327642.1|CW327642 104_823_11478859_116_35979_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478859, DNA
sequence
Length = 635
Score = 126 bits (270), Expect(2) = 1e-040
Identities = 49/87 (56%), Positives = 63/87 (72%)
Frame = +3 / +3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP GFE+R GRGLV GWVPQ R+LAH +VG FLTH GW S EGL G +V+LP +
Sbjct: 372 LPAGFEDRTRGRGLVWPGWVPQVRVLAHAAVGAFLTHCGWGSTVEGLVLGHPLVMLPFVV 551
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTF 413
DQG+ AR + ++ +G+EV R+E DG+F
Sbjct: 552 DQGIIARTMAERGVGVEVARDESDGSF 632
Score = 61.1 bits (127), Expect(2) = 1e-040
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +3 / +3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPA 122
SV+Y A GSEA LT+ L +ALGLE +G+ FLWAFR PA
Sbjct: 210 SVIYVALGSEAPLTAKTLHELALGLELAGVRFLWAFRKPA 329
>gb|CW039097.1|CW039097 104_271_10505296_115_30388 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10505296, DNA
sequence
Length = 719
Score = 125 bits (268), Expect(2) = 9e-040
Identities = 52/104 (50%), Positives = 67/104 (64%)
Frame = +3 / +2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP GFE R G LV GWVPQ +LAH +VG FLTH GW S E L G +V+LP +
Sbjct: 272 LPAGFEGRTRGHALVWSGWVPQVAVLAHAAVGAFLTHCGWGSTIESLVFGRPLVMLPFVV 451
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
DQGL AR + ++ +G+EV R+E DG+F +A A+R+ M E Q
Sbjct: 452 DQGLIARTMAERGVGVEVARDEVDGSFGRDGVAAAVRSVMVEEQ 583
Score = 59.3 bits (123), Expect(2) = 9e-040
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +3 / +2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPA 122
S +Y A GSEA LT++ L +ALGLE +G+ FLWAFR P+
Sbjct: 110 STIYVALGSEAPLTASNLHELALGLELAGVRFLWAFRKPS 229
>gb|AC169376.1| Sorghum bicolor clone SB_BBc0046M17, WORKING DRAFT SEQUENCE, 4 unordered
pieces
Length = 128615
Score = 133 bits (284), Expect(2) = 2e-038
Identities = 55/109 (50%), Positives = 71/109 (65%)
Frame = +3 / +3
Query: 138 QGTGGLPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVL 317
Q G +P+GF ER RGLV WVPQ R+LAH +VG FLTH GW SI EGL G +++
Sbjct: 108387 QEDGIVPDGFVERTGDRGLVATRWVPQVRVLAHGAVGAFLTHCGWGSIVEGLQFGHPLIM 108566
Query: 318 LPLMFDQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
LP+ DQG NARL+ K+G++ RNE DG+F +A A+R AE +
Sbjct: 108567 LPIFGDQGPNARLMEGWKVGLQAARNETDGSFDRHGVAGAVRAVAAEEE 108713
Score = 47.3 bits (97), Expect(2) = 2e-038
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = +3 / +3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPP 119
SVVY A G+EA L L+ +A GLE +G FLWA R P
Sbjct: 108261 SVVYVALGTEAPLRVELLRELAHGLELAGTRFLWALRTP 108377
>gb|CW042034.1|CW042034 104_275_10506897_115_30285 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506897, DNA
sequence
Length = 716
Score = 81.7 bits (172), Expect(3) = 6e-038
Identities = 32/49 (65%), Positives = 36/49 (73%)
Frame = +3 / +3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSR 299
LP+GFE RV GRG+V GWVPQ R+LAH +VG FLTH GW S E L R
Sbjct: 294 LPDGFEARVAGRGVVRAGWVPQVRVLAHAAVGAFLTHCGWGSTVESLFR 440
Score = 61.1 bits (127), Expect(3) = 6e-038
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +3 / +3
Query: 300 GVTMVLLPLMFDQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
G+ +V+LP + DQGL AR + + +G+EV R++ DG+F D+A A+R MAE++
Sbjct: 444 GLPLVMLPFITDQGLIARAMAARGVGVEVPRDDADGSFRRDDVAAAVRRVMAEDE 608
Score = 54.2 bits (112), Expect(3) = 6e-038
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +3 / +3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPP 119
SV+Y A GSEA +T+ Q++ +A GLE SG FLWA R P
Sbjct: 156 SVIYVALGSEAPVTADQVRELAFGLELSGARFLWAVRRP 272
>gb|CX616312.1|CX616312 GABR1_27_E04.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_27_E04_A002 3', mRNA sequence
Length = 670
Score = 125 bits (268), Expect(3) = 8e-038
Identities = 52/104 (50%), Positives = 67/104 (64%)
Frame = +3 / +3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP GFE R G LV GWVPQ +LAH +VG FLTH GW S E L G +V+LP +
Sbjct: 141 LPAGFEGRTRGHALVWSGWVPQVAVLAHAAVGAFLTHCGWGSTIESLVFGRPLVMLPFVV 320
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
DQGL AR + ++ +G+EV R+E DG+F +A A+R+ M E Q
Sbjct: 321 DQGLIARTMAERGVGVEVARDEVDGSFGRDGVAAAVRSVMVEEQ 452
Score = 48.3 bits (99), Expect(3) = 8e-038
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 27 SEAKLTSAQLQTIALGLEASGLPFLWAFRPPA 122
SEA LT++ L +ALGLE +G+ FLWAFR P+
Sbjct: 3 SEAPLTASNLHELALGLELAGVRFLWAFRKPS 98
Score = 22.6 bits (43), Expect(3) = 8e-038
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 476 GQGTGRGVWK*RGQ 517
G GTGRGV + RG+
Sbjct: 440 GGGTGRGVRQQRGE 481
>gb|CW103801.1|CW103801 104_472_11012084_148_34435_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11012084, DNA
sequence
Length = 514
Score = 113 bits (241), Expect(2) = 4e-036
Identities = 46/87 (52%), Positives = 58/87 (66%)
Frame = +3 / +2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP GFE R G LV GWVPQ +LAH +VG FLTH GW S E L G +V+LP +
Sbjct: 251 LPAGFEGRTRGHALVWSGWVPQVAVLAHAAVGAFLTHCGWGSTIESLVFGRPLVMLPFVV 430
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTF 413
DQGL AR + ++ +G+EV R+E DG+F
Sbjct: 431 DQGLIARTMAERGVGVEVARDEVDGSF 511
Score = 59.3 bits (123), Expect(2) = 4e-036
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +3 / +2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPA 122
S +Y A GSEA LT++ L +ALGLE +G+ FLWAFR P+
Sbjct: 89 STIYVALGSEAPLTASNLHELALGLELAGVRFLWAFRKPS 208
>gb|CW330767.1|CW330767 104_827_11480551_116_36011_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480551, DNA
sequence
Length = 656
Score = 113 bits (242), Expect(2) = 6e-036
Identities = 43/71 (60%), Positives = 59/71 (83%)
Frame = +3 / -1
Query: 252 FLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNARLLMDKKIGIEVERNEDDGTFAPKDIA 431
F+THAGW S+AEGL+RGV +V+LPL+FD GLNAR L++KK+G+EV R+EDDG+F +D+A
Sbjct: 656 FVTHAGWGSVAEGLARGVRLVMLPLLFDHGLNARHLVEKKLGVEVARDEDDGSFTAEDVA 477
Query: 432 DALRTAMAENQ 464
ALR M ++
Sbjct: 476 AALRRVMVGDE 444
Score = 89.0 bits (188), Expect(2) = 1e-025
Identities = 37/67 (55%), Positives = 46/67 (68%)
Frame = -2 / +3
Query: 461 VLRHGRPQSIRDVFGRERAVVFVPLHLNPDLLIHKKPGVEALIEHQRQQHHRDAPREAFG 282
V H PQS +VF RERA+V +P HL+ LL+H+ PGVEA++E +RQ H DA REA
Sbjct: 447 VPHHDPPQSSCNVFSRERAIVLIPCHLDAQLLLHQMPGVEAMVEQKRQHH*PDAAREALR 626
Query: 281 DGVPAGV 261
D PAGV
Sbjct: 627 DRAPAGV 647
Score = 58.3 bits (121), Expect(2) = 6e-036
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +3 / -1
Query: 468 GTRVKELAEVFGNDEANDQCLRDFLRYLSEY 560
G + +ELA+V GNDE NDQC+RDFLR LSEY
Sbjct: 431 GAKAQELAQVVGNDEVNDQCVRDFLRCLSEY 339
Score = 48.7 bits (100), Expect(2) = 1e-025
Identities = 22/32 (68%), Positives = 22/32 (68%)
Frame = -3 / +1
Query: 559 YSDRYRRKSRRH*SLASSFPNTSASSLTLVPS 464
YSDR RRKSR H*S SSFP T ASS PS
Sbjct: 340 YSDRQRRKSRTH*SFTSSFPTT*ASSWAFAPS 435
>gb|CW027654.1|CW027654 104_254_10498637_114_30395 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10498637, DNA
sequence
Length = 801
Score = 101 bits (216), Expect(2) = 9e-034
Identities = 43/63 (68%), Positives = 52/63 (82%)
Frame = +3 / +1
Query: 276 SIAEGLSRGVTMVLLPLMFDQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMA 455
SI EGL+RGV +VLLPLMFDQGLNAR L +KKI +EV R+E+DG+FAPKDIA ALR +
Sbjct: 1 SIIEGLARGVRLVLLPLMFDQGLNARHLTEKKISVEVPRDEEDGSFAPKDIAAALRRVVV 180
Query: 456 ENQ 464
E +
Sbjct: 181 EEE 189
Score = 85.8 bits (181), Expect(2) = 3e-027
Identities = 40/60 (66%), Positives = 46/60 (76%)
Frame = -3 / -2
Query: 457 SAMAVLRASAMSLGANVPSSSFLSTSIPIFLSIRSLALRP*SNISGNSTIVTPRERPSAM 278
S +L+A+AMSLGAN PSSS TS IF S+R LALRP*SNISG+ST +TPR RPS M
Sbjct: 182 STTTLLKAAAMSLGANEPSSSSRGTSTLIFFSVRCLALRP*SNISGSSTSLTPRARPSMM 3
Score = 62.9 bits (131), Expect(2) = 9e-034
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +3 / +1
Query: 468 GTRVKELAEVFGNDEANDQCLRDFLRYLSEYIRQHQ 575
G + KELA++FGNDE NDQC+RDFL+ LSEY RQ Q
Sbjct: 202 GDKAKELAKLFGNDEMNDQCVRDFLKCLSEYNRQ*Q 309
Score = 57.0 bits (118), Expect(2) = 3e-027
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -3 / -2
Query: 568 CLMYSDRYRRKSRRH*SLASSFPNTSASSLTLVPS 464
CL+YSDR+ RKSR H*S SSFPN ASSL L P+
Sbjct: 302 CLLYSDRHLRKSRTH*SFISSFPNNLASSLALSPN 198
>gb|CW396813.1|CW396813 fsbb001f085g19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f085g19, DNA
sequence
Length = 769
Score = 98.7 bits (209), Expect(2) = 8e-033
Identities = 41/60 (68%), Positives = 50/60 (83%)
Frame = +3 / +3
Query: 285 EGLSRGVTMVLLPLMFDQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
EGL+RGV +VLLPLMFDQGLNAR L +KKI +EV R+E+DG+FAPKDIA ALR + E +
Sbjct: 6 EGLARGVRLVLLPLMFDQGLNARHLTEKKISVEVPRDEEDGSFAPKDIAAALRRVVVEEE 185
Score = 84.0 bits (177), Expect(2) = 1e-026
Identities = 39/58 (67%), Positives = 45/58 (77%)
Frame = -3 / -1
Query: 457 SAMAVLRASAMSLGANVPSSSFLSTSIPIFLSIRSLALRP*SNISGNSTIVTPRERPS 284
S +L+A+AMSLGAN PSSS TS IF S+R LALRP*SNISG+ST +TPR RPS
Sbjct: 178 STTTLLKAAAMSLGANEPSSSSRGTSTLIFFSVRCLALRP*SNISGSSTSLTPRARPS 5
Score = 62.9 bits (131), Expect(2) = 8e-033
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +3 / +3
Query: 468 GTRVKELAEVFGNDEANDQCLRDFLRYLSEYIRQHQ 575
G + KELA++FGNDE NDQC+RDFL+ LSEY RQ Q
Sbjct: 198 GDKAKELAKLFGNDEMNDQCVRDFLKCLSEYNRQ*Q 305
Score = 57.0 bits (118), Expect(2) = 1e-026
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -3 / -1
Query: 568 CLMYSDRYRRKSRRH*SLASSFPNTSASSLTLVPS 464
CL+YSDR+ RKSR H*S SSFPN ASSL L P+
Sbjct: 298 CLLYSDRHLRKSRTH*SFISSFPNNLASSLALSPN 194
>gb|CW395662.1|CW395662 fsbb001f083m12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f083m12, DNA
sequence
Length = 606
Score = 100 bits (213), Expect(2) = 8e-033
Identities = 40/69 (57%), Positives = 48/69 (69%)
Frame = +3 / +2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP GFE+R GRGLV GWVPQ R+LAH +VG FLTH GW S EGL G +V+LP +
Sbjct: 398 LPAGFEDRTRGRGLVWPGWVPQVRVLAHAAVGAFLTHCGWGSTVEGLVLGHPLVMLPFVV 577
Query: 333 DQGLNARLL 359
DQ + AR +
Sbjct: 578 DQSIIARTM 604
Score = 61.1 bits (127), Expect(2) = 8e-033
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +3 / +2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPA 122
SV+Y A GSEA LT+ L +ALGLE +G+ FLWAFR PA
Sbjct: 236 SVIYVALGSEAPLTAKTLHELALGLELAGVRFLWAFRKPA 355
>gb|CW312652.1|CW312652 104_802_11470875_148_35778_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470875, DNA
sequence
Length = 697
Score = 93.2 bits (197), Expect(3) = 2e-032
Identities = 39/67 (58%), Positives = 48/67 (71%)
Frame = +3 / +2
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
P GF ERV+GRGLV GWV Q +L H SVG ++THAG++S+ EGL G +VLLP+ D
Sbjct: 302 PPGFTERVSGRGLVHTGWVQQQHILRHRSVGCYVTHAGFSSVVEGLVAGCRLVLLPMKGD 481
Query: 336 QGLNARL 356
Q LNA L
Sbjct: 482 QYLNAAL 502
Score = 44.6 bits (91), Expect(3) = 2e-032
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +3 / +2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAA 131
+VV+A+FGSE L A + LGLEA+G PFL P AA
Sbjct: 161 AVVFASFGSETFLPPAAATELLLGLEATGRPFLAVLNSPDGAA 289
Score = 40.5 bits (82), Expect(3) = 2e-032
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3 / +2
Query: 369 KIGIEVERNEDDGTFAPKDIADALRTAMAENQDG 470
++G+EV R ++DG F +D+ DA+ A+A+ +G
Sbjct: 518 RVGVEVARRDEDGWFGRQDVCDAVAAAVADGGEG 619
>gb|CW089308.1|CW089308 104_434_10948630_114_32602_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948630, DNA
sequence
Length = 644
Score = 93.6 bits (198), Expect(3) = 9e-032
Identities = 38/67 (56%), Positives = 47/67 (70%)
Frame = +3 / +1
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
P GF ERV GRG+VC GWV Q +L H SVG ++TH G++S+ EGL G +VLLP+ D
Sbjct: 283 PPGFAERVAGRGVVCSGWVQQQHILHHRSVGCYVTHVGFSSVVEGLVAGCRLVLLPMKGD 462
Query: 336 QGLNARL 356
Q LNA L
Sbjct: 463 QYLNAAL 483
Score = 41.8 bits (85), Expect(3) = 9e-032
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3 / +1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPP 119
+VV+A+FGSE L A + LGLEA+G PFL P
Sbjct: 145 AVVFASFGSETFLPPAAAMELLLGLEATGRPFLAVLNCP 261
Score = 40.5 bits (82), Expect(3) = 9e-032
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3 / +1
Query: 369 KIGIEVERNEDDGTFAPKDIADALRTAMAENQDG 470
++G+EV R ++DG F +D+ DA+ A+A+ +G
Sbjct: 499 RVGVEVARRDEDGWFGRQDVCDAVAAAVADGGEG 600
>gb|CL163087.1|CL163087 104_356_10806883_116_31811_019 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10806883, DNA
sequence
Length = 737
Score = 100 bits (214), Expect(2) = 2e-030
Identities = 44/108 (40%), Positives = 58/108 (53%)
Frame = +3 / -3
Query: 129 APGQGTGGLPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVT 308
A G LPEGF ER G GLV W PQ +L H +VGGFL+H GWNS E +S GV
Sbjct: 564 AAGDPLSYLPEGFTERTRGTGLVVPQWAPQVEILGHRAVGGFLSHCGWNSSLETVSSGVP 385
Query: 309 MVLLPLMFDQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAM 452
++ PL +Q +NA L + + V +DG +++A R M
Sbjct: 384 VLAWPLFAEQRMNAVKLEHVGLALRVSARREDGVVPREEVAAVTRELM 241
Score = 52.4 bits (108), Expect(2) = 2e-030
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3 / -3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPAD 125
SV+Y FGS L+S Q + +A GLEASG FLW R P+D
Sbjct: 717 SVLYVCFGSGGTLSSTQTRELAAGLEASGQRFLWVVRLPSD 595
>gb|CW192204.1|CW192204 104_614_11178899_148_36948_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11178899, DNA
sequence
Length = 561
Score = 73.9 bits (155), Expect(3) = 4e-030
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = +3 / +3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSR 299
LP+GFE RV GRG+ GWVPQ R+ H +VG FLTH GW S E + R
Sbjct: 258 LPDGFEARVAGRGVARAGWVPQVRVRQHAAVGAFLTHCGWGSTVESIFR 404
Score = 56.1 bits (116), Expect(3) = 4e-030
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +3 / +3
Query: 300 GVTMVLLPLMFDQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAM 452
G+ +V+LP + DQGL AR + +G+EV R++DDG+F D+ A+R M
Sbjct: 408 GLPLVMLPFVVDQGLIARSMAAHGVGVEVPRDDDDGSFRVDDVTAAVRPVM 560
Score = 40.5 bits (82), Expect(3) = 4e-030
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3 / +3
Query: 30 EAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPG 137
E ++T+ ++ +ALGLE SG FLWA R PA + G
Sbjct: 138 ERQVTTDHVRELALGLERSGARFLWAVRRPAGHSGG 245
>gb|CW466584.1|CW466584 fsbb001f217o04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f217o04, DNA
sequence
Length = 474
Score = 92.3 bits (195), Expect(2) = 2e-029
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = +3 / +2
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
PEG+EERV RG++ RGW PQ +LAH +VG FLTH G +S+ E + GV M+ PL+FD
Sbjct: 137 PEGWEERVGERGMLVRGWAPQTAILAHPAVGAFLTHCGSSSLLEAAAAGVPMLTWPLVFD 316
Query: 336 QGLNARLLMD 365
Q + RL+ +
Sbjct: 317 QFIEERLVTE 346
Score = 58.3 bits (121), Expect(2) = 2e-029
Identities = 25/44 (56%), Positives = 30/44 (68%)
Frame = +3 / +2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAP 134
SVVY FG+ A ++ QL+ +ALGLEASG PFLWA R A P
Sbjct: 8 SVVYVCFGTYAAISGDQLRELALGLEASGTPFLWAVRADGWAPP 139
>gb|CW162435.1|CW162435 104_569_11150941_148_36443_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11150941, DNA
sequence
Length = 662
Score = 89.0 bits (188), Expect(3) = 2e-029
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +3 / +2
Query: 186 RGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNARLLMD 365
+G+V RGW PQ R+LAH S G FL+H GWNS+ E L GV +V PL+ DQ ++R+L++
Sbjct: 398 QGVVVRGWAPQMRILAHASTGAFLSHCGWNSVLESLWHGVPVVAWPLIGDQLFDSRVLVE 577
Query: 366 KKIGIEV 386
+G+EV
Sbjct: 578 LGVGVEV 598
Score = 56.5 bits (117), Expect(3) = 2e-029
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +3 / +2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQG 143
+V++ +FGS+ + ++Q+ +A GLEASG PF+W RPP + QG
Sbjct: 203 TVLFVSFGSQNSIPASQMMELARGLEASGRPFIWVVRPPVEYDGAQG 343
Score = 22.6 bits (43), Expect(3) = 2e-029
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3 / +2
Query: 123 DAAPGQGTGGLPEGFEERV 179
D A G LP+G EERV
Sbjct: 329 DGAQGFRDEWLPDGLEERV 385
>gb|CW218685.1|CW218685 104_652_11196321_116_37460_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11196321, DNA
sequence
Length = 685
Score = 91.3 bits (193), Expect(2) = 3e-029
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = +3 / -2
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
PEG+EERV RG++ RGW PQ +LAH +VG FLTH G +S+ E + GV M+ PL+FD
Sbjct: 201 PEGWEERVGERGMLVRGWAPQTAILAHPAVGAFLTHCGSSSLLEAAAAGVPMLTWPLVFD 22
Query: 336 QGLNARL 356
Q + RL
Sbjct: 21 QFIEERL 1
Score = 58.3 bits (121), Expect(2) = 3e-029
Identities = 25/44 (56%), Positives = 30/44 (68%)
Frame = +3 / -2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAP 134
SVVY FG+ A ++ QL+ +ALGLEASG PFLWA R A P
Sbjct: 330 SVVYVCFGTYAAISGDQLRELALGLEASGTPFLWAVRADGWAPP 199
>gb|BG558527.1|BG558527 RHIZ2_56_H09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 429
Score = 90.9 bits (192), Expect(2) = 4e-029
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = +3 / +1
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
PEG+EERV RG++ RGW PQ +L+H +VG FLTH G +S+ E + GV M+ PL+FD
Sbjct: 130 PEGWEERVGERGMLVRGWAPQTAILSHPAVGAFLTHCGSSSLLEAAAAGVPMLTWPLVFD 309
Query: 336 QGLNARLLMD 365
Q + RL+ +
Sbjct: 310 QFIEERLVTE 339
Score = 58.3 bits (121), Expect(2) = 4e-029
Identities = 25/44 (56%), Positives = 30/44 (68%)
Frame = +3 / +1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAP 134
SVVY FG+ A ++ QL+ +ALGLEASG PFLWA R A P
Sbjct: 1 SVVYVCFGTYAAISGDQLRELALGLEASGTPFLWAVRADGWAPP 132
>gb|CW449831.1|CW449831 fsbb001f188c16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f188c16, DNA
sequence
Length = 549
Score = 81.7 bits (172), Expect(3) = 5e-029
Identities = 32/49 (65%), Positives = 36/49 (73%)
Frame = +3 / -2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSR 299
LP+GFE RV GRG+V GWVPQ R+LAH +VG FLTH GW S E L R
Sbjct: 233 LPDGFEARVAGRGVVRAGWVPQVRVLAHAAVGAFLTHCGWGSTVESLFR 87
Score = 54.2 bits (112), Expect(3) = 5e-029
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +3 / -2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPP 119
SV+Y A GSEA +T+ Q++ +A GLE SG FLWA R P
Sbjct: 371 SVIYVALGSEAPVTADQVRELAFGLELSGARFLWAVRRP 255
Score = 30.9 bits (61), Expect(3) = 5e-029
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3 / -2
Query: 300 GVTMVLLPLMFDQGLNARLLMDKKIGI 380
G+ +V+LP + DQGL AR + + +G+
Sbjct: 83 GLPLVMLPFITDQGLIARAMAARGVGV 3
>gb|CW103800.1|CW103800 104_472_11012084_116_34431_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11012084, DNA
sequence
Length = 628
Score = 125 bits (268), Expect(2) = 8e-029
Identities = 52/104 (50%), Positives = 67/104 (64%)
Frame = +3 / -2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP GFE R G LV GWVPQ +LAH +VG FLTH GW S E L G +V+LP +
Sbjct: 579 LPAGFEGRTRGHALVWSGWVPQVAVLAHAAVGAFLTHCGWGSTIESLVFGRPLVMLPFVV 400
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
DQGL AR + ++ +G+EV R+E DG+F +A A+R+ M E Q
Sbjct: 399 DQGLIARTMAERGVGVEVARDEVDGSFGRDGVAAAVRSVMVEEQ 268
Score = 22.6 bits (43), Expect(2) = 8e-029
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / -1
Query: 476 GQGTGRGVWK*RGQ 517
G GTGRGV + RG+
Sbjct: 280 GGGTGRGVRQQRGE 239
>gb|BZ333861.1|BZ333861 hx74f04.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx74f04 5', DNA sequence
Length = 362
Score = 105 bits (224), Expect(2) = 1e-028
Identities = 44/81 (54%), Positives = 54/81 (66%)
Frame = +3 / -3
Query: 138 QGTGGLPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVL 317
Q G +P+GF ER RGLV WVPQ R+LAH +VG FLTH GW SI EGL G +++
Sbjct: 243 QEDGIVPDGFVERPGDRGLVATRWVPQVRVLAHGAVGAFLTHCGWGSIVEGLQFGPPLIM 64
Query: 318 LPLMFDQGLNARLLMDKKIGI 380
LP+ DQG NARL K+G+
Sbjct: 63 LPIFGDQGPNARLKEGWKVGL 1
Score = 41.8 bits (85), Expect(2) = 1e-028
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +3 / -3
Query: 12 YAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPP 119
Y A G+EA L L+ +A GLE +G FLWA R P
Sbjct: 360 YVALGTEAPLRVELLRELAHGLELAGTRFLWALRTP 253
>gb|CW311653.1|CW311653 104_801_11470344_148_36279_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470344, DNA
sequence
Length = 744
Score = 91.8 bits (194), Expect(2) = 4e-028
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = +3 / -3
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
PEG+EERV RG++ RGW PQ +LAH +VG FLTH G +S+ E + GV M+ PL+FD
Sbjct: 334 PEGWEERVGERGMLVRGWAPQTAILAHPAVGAFLTHCGSSSLLEAAAAGVPMLTWPLVFD 155
Query: 336 QGLNARLLMD 365
Q + RL+ +
Sbjct: 154 QFVEERLVTE 125
Score = 54.2 bits (112), Expect(2) = 4e-028
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +3 / -3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
SVVY FG+ A ++ QL+ +ALGLEASG PFLW R
Sbjct: 463 SVVYVCFGTFAAISEEQLRELALGLEASGKPFLWVVR 353
>gb|CW140758.1|CW140758 104_531_11135953_116_34924_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135953, DNA
sequence
Length = 588
Score = 91.8 bits (194), Expect(2) = 4e-028
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = +3 / +1
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
PEG+EERV RG++ RGW PQ +LAH +VG FLTH G +S+ E + GV M+ PL+FD
Sbjct: 310 PEGWEERVGERGMLVRGWAPQTAILAHPAVGAFLTHCGSSSLLEAAAAGVPMLTWPLVFD 489
Query: 336 QGLNARLLMD 365
Q + RL+ +
Sbjct: 490 QFVEERLVTE 519
Score = 54.2 bits (112), Expect(2) = 4e-028
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +3 / +1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
SVVY FG+ A ++ QL+ +ALGLEASG PFLW R
Sbjct: 181 SVVYVCFGTFAAISEEQLRELALGLEASGKPFLWVVR 291
>gb|CF487063.1|CF487063 POL1_41_B10.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_41_B10_A002 5', mRNA sequence
Length = 752
Score = 102 bits (218), Expect(2) = 5e-028
Identities = 40/70 (57%), Positives = 51/70 (72%)
Frame = +3 / +2
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
PEG+E+RV RGLV RGW PQ +LAH SVG FLTH GWNS+ E S GV ++ PL+F+
Sbjct: 413 PEGWEQRVANRGLVVRGWAPQLAVLAHPSVGAFLTHCGWNSVLEAASAGVPVLTWPLVFE 592
Query: 336 QGLNARLLMD 365
Q +N RL+ +
Sbjct: 593 QFINERLVTE 622
Score = 42.8 bits (87), Expect(2) = 5e-028
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3 / +2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
SVV+ FGS A + Q + +ALGLEAS FLW R
Sbjct: 275 SVVFVCFGSWADFSVTQSRELALGLEASDQTFLWVVR 385
>gb|CW409172.1|CW409172 fsbb001f103f24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f103f24, DNA
sequence
Length = 675
Score = 95.9 bits (203), Expect(2) = 5e-028
Identities = 41/82 (50%), Positives = 49/82 (59%)
Frame = +3 / -3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGF ER GLV W PQ ++LAH + GGFLTH GWNS E L GV MV PL
Sbjct: 439 LPEGFLERTKDVGLVVPSWAPQTQVLAHRATGGFLTHCGWNSTLESLVHGVPMVAWPLFA 260
Query: 333 DQGLNARLLMDKKIGIEVERNE 398
+Q LNA +L + +G + E
Sbjct: 259 EQRLNAVMLAAEGVGAAIRLPE 194
Score = 49.6 bits (102), Expect(2) = 5e-028
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +3 / -3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPAD 125
SV++ +FGS L +++ +ALGLE SG FLW R P+D
Sbjct: 622 SVIFVSFGSGGALPKEEMRELALGLELSGQRFLWVVRSPSD 500
>gb|CW089259.1|CW089259 104_434_10948601_114_32582_071 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948601, DNA
sequence
Length = 668
Score = 95.9 bits (203), Expect(2) = 5e-028
Identities = 41/82 (50%), Positives = 49/82 (59%)
Frame = +3 / +1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGF ER GLV W PQ ++LAH + GGFLTH GWNS E L GV MV PL
Sbjct: 274 LPEGFLERTKDVGLVVPSWAPQTQVLAHRATGGFLTHCGWNSTLESLVHGVPMVAWPLFA 453
Query: 333 DQGLNARLLMDKKIGIEVERNE 398
+Q LNA +L + +G + E
Sbjct: 454 EQRLNAVMLAAEGVGAAIRLPE 519
Score = 49.6 bits (102), Expect(2) = 5e-028
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +3 / +1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPAD 125
SV++ +FGS L +++ +ALGLE SG FLW R P+D
Sbjct: 91 SVIFVSFGSGGALPKEEMRELALGLELSGQRFLWVVRSPSD 213
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence
Length = 204120
Score = 81.3 bits (171), Expect(3) = 7e-028
Identities = 29/65 (44%), Positives = 41/65 (63%)
Frame = +3 / -2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP GF+ER RG V + W PQ +L H + G F+TH GWNS EG++ G+ ++ PL
Sbjct: 154814 LPAGFQERTEDRGFVVKNWAPQVDVLRHRAAGAFVTHCGWNSTLEGVAAGLPLLCWPLYA 154635
Query: 333 DQGLN 347
+Q +N
Sbjct: 154634 EQKMN 154620
Score = 48.7 bits (100), Expect(3) = 7e-028
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +3 / -2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAA 131
SVV+ FGS QL+ IA+GLE SG FLW R P AA
Sbjct: 154970 SVVFLCFGSMGAFPKKQLEEIAVGLERSGQRFLWVVRGPPGAA 154842
Score = 32.7 bits (65), Expect(3) = 7e-028
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = +3 / -2
Query: 351 RLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQDGTRVKELA 491
R++ + K+G+E+ R +DD +++ +R M ++ ++E A
Sbjct: 154613 RIVEEMKLGVEMRRRDDDDVVTAEEVEAKVRWVMEDSDGARALRERA 154473
>gb|CW110662.1|CW110662 104_483_11103842_116_34518_005 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11103842, DNA
sequence
Length = 648
Score = 101 bits (216), Expect(2) = 2e-027
Identities = 38/71 (53%), Positives = 51/71 (71%)
Frame = +3 / -2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
L +GFEERV RGL+ RGW PQ +L H+S+GGF+TH GWNSI EG+ GV ++ P
Sbjct: 431 LADGFEERVKDRGLIIRGWAPQVMILWHKSIGGFMTHCGWNSILEGICAGVPLITWPHFA 252
Query: 333 DQGLNARLLMD 365
+Q +N RL++D
Sbjct: 251 EQFVNERLVVD 219
Score = 41.8 bits (85), Expect(2) = 2e-027
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3 / -2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
SV++ +FGS A QL + LGLE+S PF+W +
Sbjct: 575 SVIFVSFGSMACTAPQQLVELGLGLESSNKPFIWVIK 465
>gb|AW922847.1|AW922847 DG1_46_A02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 597
Score = 93.2 bits (197), Expect(3) = 2e-027
Identities = 39/67 (58%), Positives = 48/67 (71%)
Frame = +3 / +1
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
P GF ERV+GRGLV GWV Q +L H SVG ++THAG++S+ EGL G +VLLP+ D
Sbjct: 91 PPGFTERVSGRGLVHTGWVQQQHILRHRSVGCYVTHAGFSSVVEGLVAGCRLVLLPMKGD 270
Query: 336 QGLNARL 356
Q LNA L
Sbjct: 271 QYLNAAL 291
Score = 40.5 bits (82), Expect(3) = 2e-027
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3 / +1
Query: 369 KIGIEVERNEDDGTFAPKDIADALRTAMAENQDG 470
++G+EV R ++DG F +D+ DA+ A+A+ +G
Sbjct: 307 RVGVEVARRDEDGWFGRQDVCDAVAAAVADGGEG 408
Score = 27.6 bits (54), Expect(3) = 2e-027
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3 / +1
Query: 63 IALGLEASGLPFLWAFRPPADAA 131
+ LGLEA+G PFL P AA
Sbjct: 10 LLLGLEATGRPFLAVLNSPDGAA 78
>gb|CW447301.1|CW447301 fsbb001f180f18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f180f18, DNA
sequence
Length = 405
Score = 81.3 bits (171), Expect(3) = 4e-027
Identities = 31/60 (51%), Positives = 43/60 (71%)
Frame = +3 / +2
Query: 186 RGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNARLLMD 365
+G+V RGW PQ R+LAH S G FL+H GWNS+ E L GV +V PL+ DQ ++R+L++
Sbjct: 224 QGVVVRGWAPQMRILAHASTGAFLSHCGWNSVLESLWHGVPVVAWPLIGDQLFDSRVLVE 403
Score = 56.5 bits (117), Expect(3) = 4e-027
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +3 / +2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQG 143
+V++ +FGS+ + ++Q+ +A GLEASG PF+W RPP + QG
Sbjct: 29 TVLFVSFGSQNSIPASQMMELARGLEASGRPFIWVVRPPVEYDGAQG 169
Score = 22.6 bits (43), Expect(3) = 4e-027
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3 / +2
Query: 123 DAAPGQGTGGLPEGFEERV 179
D A G LP+G EERV
Sbjct: 155 DGAQGFRDEWLPDGLEERV 211
>gb|CW343186.1|CW343186 104_845_11487282_148_36183_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11487282, DNA
sequence
Length = 610
Score = 93.6 bits (198), Expect(3) = 1e-026
Identities = 38/67 (56%), Positives = 47/67 (70%)
Frame = +3 / -2
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
P GF ERV GRG+VC GWV Q +L H SVG ++TH G++S+ EGL G +VLLP+ D
Sbjct: 525 PPGFAERVAGRGVVCSGWVQQQHILHHRSVGCYVTHVGFSSVVEGLVAGCRLVLLPMKGD 346
Query: 336 QGLNARL 356
Q LNA L
Sbjct: 345 QYLNAAL 325
Score = 40.5 bits (82), Expect(3) = 1e-026
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3 / -2
Query: 369 KIGIEVERNEDDGTFAPKDIADALRTAMAENQDG 470
++G+EV R ++DG F +D+ DA+ A+A+ +G
Sbjct: 309 RVGVEVARRDEDGWFGRQDVCDAVAAAVADGGEG 208
Score = 24.4 bits (47), Expect(3) = 1e-026
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3 / -2
Query: 63 IALGLEASGLPFLWAFRPP 119
+ LGLEA+G PFL P
Sbjct: 603 LLLGLEATGRPFLAVLNCP 547
>gb|CW020800.1|CW020800 104_109_10409176_114_30492 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10409176, DNA
sequence
Length = 573
Score = 93.2 bits (197), Expect(3) = 2e-026
Identities = 38/67 (56%), Positives = 49/67 (73%)
Frame = +3 / +3
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
P GF+ERV+GRG+V GWV Q +L H SVG ++THAG++S+ EGL G +VLLP+ D
Sbjct: 87 PPGFKERVSGRGIVHSGWVQQQHILRHRSVGCYVTHAGFSSVVEGLVAGCRLVLLPMKGD 266
Query: 336 QGLNARL 356
Q LNA L
Sbjct: 267 QYLNAAL 287
Score = 37.7 bits (76), Expect(3) = 2e-026
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3 / +3
Query: 369 KIGIEVERNEDDGTFAPKDIADALRTAMAENQDG 470
++G+EV R ++DG F D+ DA+ A+A + G
Sbjct: 303 RVGVEVARRDEDGWFGRHDVCDAVAAAVANDGGG 404
Score = 26.7 bits (52), Expect(3) = 2e-026
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3 / +3
Query: 69 LGLEASGLPFLWAFRPPAD 125
LGLEA+G PFL P D
Sbjct: 3 LGLEATGRPFLAVLNSPDD 59
>gb|CW307346.1|CW307346 104_795_11468092_116_35729_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468092, DNA
sequence
Length = 708
Score = 91.3 bits (193), Expect(2) = 3e-026
Identities = 38/104 (36%), Positives = 57/104 (54%)
Frame = +3 / -3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGF ER +GRG+V + W PQ +L H + G F+TH GWNS+ E S GV M+ P+
Sbjct: 439 LPEGFLERTSGRGMVVKMWAPQVEVLRHAATGAFMTHCGWNSVLEAASAGVPMLCWPMYA 260
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
+Q LN ++D+ V D+ +++ +R M +
Sbjct: 259 EQRLNKVFVVDEIKAGVVMDGYDEELVRAEEVEKKVRLVMESEE 128
Score = 48.3 bits (99), Expect(2) = 3e-026
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3 / -3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPAD 125
SVV+ FGS +++AQ++ IA GLE+SG FLW R P +
Sbjct: 613 SVVFLCFGSLGAVSAAQIKEIARGLESSGHRFLWVVRSPPE 491
>gb|CW032833.1|CW032833 104_262_10501615_115_30362 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10501615, DNA
sequence
Length = 665
Score = 89.5 bits (189), Expect(3) = 3e-026
Identities = 38/66 (57%), Positives = 43/66 (65%)
Frame = +3 / +3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP GF R GRGLV W PQ +LAH +VGGF+TH GWNSI E L GV M+ PL
Sbjct: 216 LPTGFLTRTRGRGLVWPAWAPQKEILAHPAVGGFVTHCGWNSILESLWFGVPMLPWPLYG 395
Query: 333 DQGLNA 350
+Q LNA
Sbjct: 396 EQHLNA 413
Score = 43.7 bits (89), Expect(3) = 3e-026
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +3 / +3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
SVV+ FGS L +AQ++ +A GLE G FLW R
Sbjct: 51 SVVFLCFGSNGVLDAAQVREVAAGLERGGHRFLWVLR 161
Score = 24.0 bits (46), Expect(3) = 3e-026
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1 / +1
Query: 361 WIRRSGLRWRGTKTTARSR 417
W RR G W G K R R
Sbjct: 502 WRRRCGA*WAGQKEAGRPR 558
>gb|CW040361.1|CW040361 104_273_10506094_114_30264 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506094, DNA
sequence
Length = 580
Score = 91.3 bits (193), Expect(2) = 4e-026
Identities = 33/65 (50%), Positives = 43/65 (66%)
Frame = +3 / -1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGF ER RG V + W PQ +L H S+G F+TH GWNS+ EG++ GV M+ PL
Sbjct: 196 LPEGFLERTRERGFVVKNWAPQSEVLRHRSIGAFVTHCGWNSVLEGIASGVPMICWPLYA 17
Query: 333 DQGLN 347
+Q +N
Sbjct: 16 EQKMN 2
Score = 47.8 bits (98), Expect(2) = 4e-026
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +3 / -1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQG 143
SVV+ +FGS ++ QL+ IA GLE+SG FLW R P + G
Sbjct: 367 SVVFLSFGSLGTFSAPQLREIARGLESSGQRFLWVVRNPPEHRSNSG 227
>gb|BM323694.1|BM323694 PIC1_22_C02.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 497
Score = 95.0 bits (201), Expect(2) = 4e-026
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = +3 / +1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
L EGFE+RV RGL+ RGW PQ +L+H +VGGFLTH GWN+ E ++ GV ++ P
Sbjct: 223 LAEGFEDRVKDRGLLVRGWAPQVTILSHPAVGGFLTHCGWNAALEAIAHGVPVLTWPNFS 402
Query: 333 DQGLNARLLMD 365
DQ + RLL+D
Sbjct: 403 DQFSSERLLVD 435
Score = 44.1 bits (90), Expect(2) = 4e-026
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +3 / +1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQ 140
SV+Y +FGS A L + Q+ + GLEAS PF+WA + + A Q
Sbjct: 79 SVLYISFGSLAHLPAKQVVELGRGLEASERPFVWAIKEASSNADVQ 216
>gb|BM323424.1|BM323424 PIC1_19_B04.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 485
Score = 95.0 bits (201), Expect(2) = 4e-026
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = +3 / +1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
L EGFE+RV RGL+ RGW PQ +L+H +VGGFLTH GWN+ E ++ GV ++ P
Sbjct: 223 LAEGFEDRVKDRGLLVRGWAPQVTILSHPAVGGFLTHCGWNAALEAIAHGVPVLTWPNFS 402
Query: 333 DQGLNARLLMD 365
DQ + RLL+D
Sbjct: 403 DQFSSERLLVD 435
Score = 44.1 bits (90), Expect(2) = 4e-026
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +3 / +1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQ 140
SV+Y +FGS A L + Q+ + GLEAS PF+WA + + A Q
Sbjct: 79 SVLYISFGSLAHLPAKQVVELGRGLEASERPFVWAIKEASSNADVQ 216
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 812,282,454
Number of Sequences: 832831
Number of extensions: 14235646
Number of successful extensions: 221914
Number of sequences better than 1.0e-020: 143
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 19723071212
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)