TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3748380.2.1
(1272 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|U32110.1|SBU32110 Sorghum bicolor putative MADS box prot... 368 e-134
gb|CD233526.1|CD233526 SS1_2_G04.g1_A012 Salt-stressed seed... 248 1e-064
gb|CF480443.1|CF480443 POL1_65_G02.g1_A002 Pollen Sorghum b... 248 1e-064
gb|CD431694.1|CD431694 ETH1_10_G05.g1_A002 Ethylene-treated... 243 6e-063
gb|BG241308.1|BG241308 OV1_40_G05.b1_A002 Ovary 1 (OV1) Sor... 241 2e-062
gb|BG240086.1|BG240086 OV1_17_G05.b1_A002 Ovary 1 (OV1) Sor... 238 1e-061
gb|U49734.1|SBU49734 Sorghum bicolor MADS box transcription... 206 5e-052
gb|CF431741.1|CF431741 NIT1_10_D03.g1_A002 Nitrogen-deficie... 197 4e-049
gb|AY827471.1| Sorghum bicolor MADS box transcription facto... 115 9e-042
gb|AY597522.1| Sorghum bicolor leafy hull sterile 1 (LHS1) ... 107 6e-035
gb|BG048737.1|BG048737 OV1_22_D05.b1_A002 Ovary 1 (OV1) Sor... 122 4e-034
gb|CW322676.1|CW322676 104_816_11476224_116_35954_088 Sorgh... 146 6e-034
gb|CW359630.1|CW359630 fsbb001f027f15k0 Sorghum methylation... 146 6e-034
gb|BE918053.1|BE918053 OV1_1_C11.b1_A002 Ovary 1 (OV1) Sorg... 138 2e-031
gb|BE918762.1|BE918762 OV1_4_F11.b1_A002 Ovary 1 (OV1) Sorg... 138 2e-031
gb|BG357222.1|BG357222 OV2_11_C11.b1_A002 Ovary 2 (OV2) Sor... 138 2e-031
gb|CW481370.1|CW481370 fsbb001f240o12f0 Sorghum methylation... 137 4e-031
gb|BI098309.1|BI098309 IP1_30_G10.b1_A002 Immature pannicle... 136 8e-031
gb|BG948060.1|BG948060 IP1_8_H04.b1_A002 Immature pannicle ... 135 1e-030
gb|CW230669.1|CW230669 104_679_11210696_116_37485_022 Sorgh... 133 6e-030
gb|BG054385.1|BG054385 OV2_3_G06.b1_A002 Ovary 2 (OV2) Sorg... 133 8e-030
gb|CW361341.1|CW361341 fsbb001f029n10k0 Sorghum methylation... 79 1e-029
gb|BG357245.1|BG357245 OV2_11_F01.b1_A002 Ovary 2 (OV2) Sor... 131 3e-029
gb|CW032589.1|CW032589 104_261_10501470_114_30363 Sorghum m... 95 3e-029
gb|BM324751.1|BM324751 PIC1_35_B11.b1_A002 Pathogen-infecte... 127 5e-028
gb|CD429087.1|CD429087 ETH1_2_E10.g1_A002 Ethylene-treated ... 127 5e-028
gb|CW034003.1|CW034003 104_263_10502289_114_30359 Sorghum m... 122 8e-027
gb|CW034004.1|CW034004 104_263_10502289_115_30360 Sorghum m... 122 8e-027
gb|CW365810.1|CW365810 fsbb001f038i06k0 Sorghum methylation... 122 8e-027
gb|CW081771.1|CW081771 104_422_10942807_114_32316_032 Sorgh... 121 3e-026
gb|CW081772.1|CW081772 104_422_10942807_114_32345_032 Sorgh... 121 3e-026
gb|CW275678.1|CW275678 104_749_11405089_148_35390_013 Sorgh... 119 1e-025
gb|CW344565.1|CW344565 104_847_11488020_148_36203_044 Sorgh... 119 1e-025
gb|BE918857.1|BE918857 FM1_1_A12.b1_A003 Floral-Induced Mer... 117 4e-025
gb|BE918862.1|BE918862 FM1_1_B06.b1_A003 Floral-Induced Mer... 117 4e-025
gb|BF317935.1|BF317935 OV1_9_F09.b1_A002 Ovary 1 (OV1) Sorg... 117 4e-025
gb|BF657168.1|BF657168 OV2_21_E10.b1_A002 Ovary 2 (OV2) Sor... 117 4e-025
gb|BF657564.1|BF657564 OV2_23_G05.b1_A002 Ovary 2 (OV2) Sor... 117 4e-025
gb|BF657695.1|BF657695 OV2_20_F03.b1_A002 Ovary 2 (OV2) Sor... 117 4e-025
gb|BF657741.1|BF657741 OV2_17_D12.b1_A002 Ovary 2 (OV2) Sor... 117 4e-025
gb|BG240312.1|BG240312 OV1_20_E03.b1_A002 Ovary 1 (OV1) Sor... 117 4e-025
gb|BG412023.1|BG412023 OV2_37_A12.b1_A002 Ovary 2 (OV2) Sor... 117 4e-025
gb|CW461504.1|CW461504 fsbb001f209d06f0 Sorghum methylation... 116 5e-025
gb|CW280818.1|CW280818 104_756_11407834_116_35450_043 Sorgh... 116 7e-025
gb|CW296811.1|CW296811 104_778_11461713_116_35630_035 Sorgh... 116 7e-025
gb|CW332085.1|CW332085 104_829_11481239_148_36028_086 Sorgh... 116 7e-025
gb|CW405640.1|CW405640 fsbb001f098e17f0 Sorghum methylation... 116 7e-025
gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-lik... 116 7e-025
gb|CW380917.1|CW380917 fsbb001f062a07k0 Sorghum methylation... 116 1e-024
gb|CL166695.1|CL166695 104_362_10809549_114_31798_381 Sorgh... 115 1e-024
gb|CW327830.1|CW327830 104_823_11478965_116_35975_019 Sorgh... 115 1e-024
gb|CW327831.1|CW327831 104_823_11478965_148_35976_019 Sorgh... 115 1e-024
gb|CW486759.1|CW486759 fsbb001f252d14f0 Sorghum methylation... 115 1e-024
gb|CW486760.1|CW486760 fsbb001f252d14k0 Sorghum methylation... 115 1e-024
gb|BE918068.1|BE918068 OV1_1_E07.b1_A002 Ovary 1 (OV1) Sorg... 114 3e-024
gb|BG054384.1|BG054384 OV2_3_G05.b1_A002 Ovary 2 (OV2) Sorg... 114 3e-024
gb|BG412085.1|BG412085 OV2_37_G09.b1_A002 Ovary 2 (OV2) Sor... 114 3e-024
gb|AW745210.1|AW745210 LG1_387_D10.b1_A002 Light Grown 1 (L... 114 3e-024
gb|BG357712.1|BG357712 OV2_29_D08.b1_A002 Ovary 2 (OV2) Sor... 114 3e-024
gb|BG357882.1|BG357882 OV2_31_D08.b1_A002 Ovary 2 (OV2) Sor... 114 3e-024
gb|BG649748.1|BG649748 RHIZ2_83_B06.b1_A003 Rhizome2 (RHIZ2... 114 3e-024
gb|CW433226.1|CW433226 fsbb001f148f16k0 Sorghum methylation... 48 4e-024
gb|CF430206.1|CF430206 PH1_26_B03.g1_A002 Phosphorous-defic... 113 7e-024
gb|CD432530.1|CD432530 ETH1_30_C08.g1_A002 Ethylene-treated... 103 7e-024
gb|BM323459.1|BM323459 PIC1_19_E07.b1_A002 Pathogen-infecte... 103 7e-024
gb|CL167141.1|CL167141 104_363_10809866_114_31800_314 Sorgh... 112 9e-024
gb|CW067285.1|CW067285 104_314_10524173_115_30127 Sorghum m... 112 9e-024
gb|CW112067.1|CW112067 104_485_11104678_116_34538_083 Sorgh... 112 9e-024
gb|CW128198.1|CW128198 104_509_11113875_148_34748_004 Sorgh... 112 9e-024
gb|CW171069.1|CW171069 104_581_11155545_116_36517_035 Sorgh... 112 9e-024
gb|CW273795.1|CW273795 104_746_11404091_148_35366_040 Sorgh... 112 9e-024
gb|CW255743.1|CW255743 104_720_11226403_116_35130_072 Sorgh... 112 1e-023
gb|CW372294.1|CW372294 fsbb001f048c08f0 Sorghum methylation... 112 1e-023
gb|CW409217.1|CW409217 fsbb001f103g24f0 Sorghum methylation... 112 1e-023
gb|CW489948.1|CW489948 fsbb001f275c14k0 Sorghum methylation... 112 1e-023
gb|CW329596.1|CW329596 104_826_11479928_116_35994_028 Sorgh... 111 2e-023
gb|CW329597.1|CW329597 104_826_11479928_148_35993_028 Sorgh... 111 2e-023
gb|CW393458.1|CW393458 fsbb001f080i11k0 Sorghum methylation... 111 2e-023
gb|CW502569.1|CW502569 fsbb001f298p16f0 Sorghum methylation... 110 4e-023
gb|BZ694660.1|BZ694660 SP__Ba0050A11.f SP__Ba Sorghum propi... 110 6e-023
gb|CW142324.1|CW142324 104_533_11136795_116_34938_006 Sorgh... 110 6e-023
gb|CW142325.1|CW142325 104_533_11136795_148_34942_006 Sorgh... 110 6e-023
gb|CW448513.1|CW448513 fsbb001f182c17k0 Sorghum methylation... 110 6e-023
gb|CW502333.1|CW502333 fsbb001f298j20f0 Sorghum methylation... 110 6e-023
gb|CW502334.1|CW502334 fsbb001f298j20k0 Sorghum methylation... 110 6e-023
gb|CW788871.1|CW788871 SP__Ba0050A11.f SP__Ba Sorghum propi... 110 6e-023
gb|CD463019.1|CD463019 ETH1_41_H12.g1_A002 Ethylene-treated... 109 8e-023
gb|CD432822.1|CD432822 ETH1_33_F08.g1_A002 Ethylene-treated... 106 8e-022
gb|BF705575.1|BF705575 RHIZ2_4_H03.b1_A003 Rhizome2 (RHIZ2)... 100 1e-021
gb|CF432922.1|CF432922 NIT1_19_H01.g1_A002 Nitrogen-deficie... 104 3e-021
gb|CW386489.1|CW386489 fsbb001f070g18k0 Sorghum methylation... 104 4e-021
gb|BE354988.1|BE354988 DG1_10_H09.b1_A002 Dark Grown 1 (DG1... 104 4e-021
gb|CW063376.1|CW063376 104_309_10521968_114_30136 Sorghum m... 103 5e-021
gb|CW327344.1|CW327344 104_823_11478696_116_35978_096 Sorgh... 103 5e-021
gb|BE596704.1|BE596704 PI1_58_F04.b1_A002 Pathogen induced ... 103 5e-021
gb|CW034880.1|CW034880 104_265_10502824_115_30379 Sorghum m... 103 7e-021
>gb|U32110.1|SBU32110 Sorghum bicolor putative MADS box protein (SbMADS2) mRNA, partial cds
Length = 1186
Score = 368 bits (798), Expect(7) = e-134
Identities = 160/176 (90%), Positives = 163/176 (92%)
Frame = -1 / +3
Query: 1191 KVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASDSRMD 1012
KVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYA+DSRMD
Sbjct: 3 KVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYATDSRMD 182
Query: 1011 KILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKX 832
KILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQ+CHKHLMGEDLESLNPK
Sbjct: 183 KILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNPKE 362
Query: 831 XXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELSERQKAVA 664
LKHIRSRKSHLMAESISELQKKERSLQEENKALQKEL+ERQKA A
Sbjct: 363 LQQLEQQLESSLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELAERQKAAA 530
Score = 308 bits (667), Expect(6) = e-114
Identities = 139/177 (78%), Positives = 139/177 (78%)
Frame = +2 / -1
Query: 662 LATAFCLSESSFCRAXXXXXXXXXXXXXXEIDSAIRWLFLDLMXXXXXXXXXXXXXXXFG 841
LA AFCLS SSFCRA EIDSAIRWLFLDLM G
Sbjct: 532 LAAAFCLSASSFCRALFSSCSDLSFFCSSEIDSAIRWLFLDLMCFSELSSCCSSCWSSLG 353
Query: 842 FKDSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMR 1021
FKDSRSSPIRCLWH MVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMR
Sbjct: 352 FKDSRSSPIRCLWHF*MVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMR 173
Query: 1022 ESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTL 1192
ES AYS*SLPLGEKTMTATSASQRTEISCAF SSP RRLEKVTCRFILFSIR SCTL
Sbjct: 172 ESVAYS*SLPLGEKTMTATSASQRTEISCAFLSSPLRRLEKVTCRFILFSIRLSCTL 2
Score = 224 bits (484), Expect(9) = e-102
Identities = 103/123 (83%), Positives = 105/123 (85%)
Frame = -3 / +2
Query: 1057 PQGQALRVRLRLPHGQNSRTL*AIFLC*KGSYFS*I*K*GKLVPRIQETEGQN*DHTKMP 878
PQGQAL VR RLPHGQNSRTL*AIFLC*KGSYFS*I*K*GKLVPRIQETEGQN*DH+KMP
Sbjct: 137 PQGQAL*VRHRLPHGQNSRTL*AIFLC*KGSYFS*I*K*GKLVPRIQETEGQN*DHSKMP 316
Query: 877 QAPDGRGSRVFESKRAPTTRAAAGELTEAHQIKKEPPYGRVNFXXXXXXXXXXXXXXGST 698
QAPDGRGSRVFES+RAPTTRAAAGELTEAHQIKKEPPYG V F GST
Sbjct: 317 QAPDGRGSRVFESQRAPTTRAAAGELTEAHQIKKEPPYG*VYF*TTEEGEVTAGGEQGST 496
Query: 697 EGT 689
EGT
Sbjct: 497 EGT 505
Score = 184 bits (396), Expect(8) = 1e-076
Identities = 77/113 (68%), Positives = 80/113 (70%)
Frame = +3 / -2
Query: 687 KVPSVEXXXXXXXXXXXXXXQKLTRP*GGSFLI*CXXXXXXXXXXXXXXXXDSKTLDPLP 866
+VPSVE QK T+P*GGSFLI*C DSKTLDPLP
Sbjct: 507 QVPSVEPCSPPAVTSPSSVVQK*TQP*GGSFLI*CASVSSPAAALVVGALWDSKTLDPLP 328
Query: 867 SGACGIFVWSQFWPSVSCIRGTNFPHFQIQLK*EPFQHRNIAHNVLEFCPCGS 1025
SGACGIF WSQFWPSVSCIRGT+FPHFQIQLK*EPFQHRNIAHNV EFCPCGS
Sbjct: 327 SGACGIFEWSQFWPSVSCIRGTSFPHFQIQLK*EPFQHRNIAHNVREFCPCGS 169
Score = 149 bits (320), Expect(5) = 1e-053
Identities = 69/92 (75%), Positives = 72/92 (78%)
Frame = -2 / +1
Query: 1016 WTKF*NVMSDIPMLKRLLFQLNLKVREIGATNTGN*RPKLRPYKDATST*WERI*SL*IQ 837
WTKF NVMSDIPMLKRLLFQLNLKVRE GATNTGN*RPKLRP+K+ATST*WERI*SL*I
Sbjct: 178 WTKFSNVMSDIPMLKRLLFQLNLKVRETGATNTGN*RPKLRPFKNATST*WERI*SL*IP 357
Query: 836 KXXXXXXXXXXXXXXXSDQERATLWPSQFLSY 741
K SDQERATLW S FL+Y
Sbjct: 358 KSSNN*SSSWRAH*STSDQERATLWLSLFLNY 453
Score = 123 bits (263), Expect(8) = 4e-050
Identities = 56/61 (91%), Positives = 57/61 (93%)
Frame = +1 / -3
Query: 835 FWIQRL*ILSHQVLVASLYGLNFGLQFPVFVAPISLTFRFS*NKSLFSIGISLITF*NFV 1014
F IQRL*ILSHQVLVA L GLNFGLQFPVFVAP+SLTFRFS*NKSLFSIGISLITF NFV
Sbjct: 359 FGIQRL*ILSHQVLVAFLNGLNFGLQFPVFVAPVSLTFRFS*NKSLFSIGISLITFENFV 180
Query: 1015 H 1017
H
Sbjct: 179 H 177
Score = 77.1 bits (162), Expect(7) = e-134
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = -3 / +3
Query: 622 DTGPGPDKLIVFFLHDEAGSTGTATSTKHLLPAVEHRRERRR 497
DT PGPDKLI+ LHDEAGS G+A STKH+LPA ++RRER R
Sbjct: 567 DTDPGPDKLIIVLLHDEAGSAGSAASTKHMLPAADNRRER*R 692
Score = 76.2 bits (160), Expect(6) = e-114
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +2 / -3
Query: 515 MLNGGKQMFCGGGSPC*SCLIMKEEDDELVWTW 613
+++GGK MFCGGG PC*SCLIMKE+DDELVW W
Sbjct: 674 IISGGKHMFCGGGRPC*SCLIMKEDDDELVWAW 576
Score = 71.2 bits (149), Expect(8) = 1e-076
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = +1 / -2
Query: 490 SHLFASLSDAQRREADVLWRWQSLLILPHHEGRRR*AC 603
SHLF SLSD QRREA VLWR Q+LLILPHHEG R *AC
Sbjct: 699 SHLFTSLSDYQRREAYVLWRRQTLLILPHHEGGR**AC 586
Score = 65.2 bits (136), Expect(9) = e-102
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = -3 / +2
Query: 1192 QGAAEADREQDKPAGDLLQAPERAAEEGA 1106
QGAA+ADREQDKPAGDLLQAP+RAA+EGA
Sbjct: 2 QGAAQADREQDKPAGDLLQAPQRAAQEGA 88
Score = 56.5 bits (117), Expect(9) = e-102
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -1 / +1
Query: 558 GLPPPQNICFPPLSIGERGEEV 493
GLPPPQNICFPPL IGERGEEV
Sbjct: 631 GLPPPQNICFPPLIIGERGEEV 696
Score = 53.8 bits (111), Expect(8) = 4e-050
Identities = 25/35 (71%), Positives = 26/35 (74%)
Frame = +3 / -1
Query: 498 LRLSLRCSTAGSRCFVEVAVPVDPASS*RKKTMSL 602
L LSLR S AGS CFVE A P DPASS*R+ MSL
Sbjct: 691 LHLSLRLSAAGSICFVEAADPADPASS*RRTMMSL 587
Score = 52.4 bits (108), Expect(5) = 1e-053
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = -2 / +1
Query: 1193 ARCS*SG*RTR*TGR*PSPSAGTGC 1119
ARCS SG*RTR*TGR*PSPSA TGC
Sbjct: 1 ARCSSSG*RTR*TGR*PSPSAATGC 75
Score = 46.9 bits (96), Expect(6) = e-114
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +1 / -3
Query: 388 LCVEVAQHPWRQTCDAE 438
LC+EVAQHPWRQTCDA+
Sbjct: 803 LCIEVAQHPWRQTCDAD 753
Score = 43.7 bits (89), Expect(8) = 1e-076
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2 / -1
Query: 389 YALRWLSIHGGRPAMR 436
YALRWLSIHGGRPAMR
Sbjct: 802 YALRWLSIHGGRPAMR 755
Score = 42.3 bits (86), Expect(7) = e-134
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2 / +1
Query: 437 SASQVCRHGC*ATSTHKE 384
SASQVCRHGC*ATS HK+
Sbjct: 754 SASQVCRHGC*ATSMHKQ 807
Score = 41.4 bits (84), Expect(9) = e-102
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1 / +3
Query: 435 RIAGLPPWMLSHLNA* 388
RIAGLPPWMLSHLNA*
Sbjct: 756 RIAGLPPWMLSHLNA* 803
Score = 40.0 bits (81), Expect(5) = 1e-053
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -3 / +2
Query: 436 PHRRSAAMDAEPPQRIRR 383
PHRRSAAMDAEPPQ I R
Sbjct: 755 PHRRSAAMDAEPPQCISR 808
Score = 40.0 bits (81), Expect(8) = 4e-050
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +3 / -2
Query: 384 LLMR*GGSASMAADLRCG 437
LLM *GGSASMAADLRCG
Sbjct: 807 LLMH*GGSASMAADLRCG 754
Score = 36.8 bits (74), Expect(9) = e-102
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 602 QAHRLLPS**GRINRDCHLHKT 537
QAH PS**GRI+R C LHKT
Sbjct: 587 QAHHRPPS**GRISRVCRLHKT 652
Score = 33.6 bits (67), Expect(7) = e-134
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / +2
Query: 207 YYCPITRESSGAFGER 160
YYC +T ESS AFGER
Sbjct: 1079 YYCSVTLESSSAFGER 1126
Score = 32.2 bits (64), Expect(9) = e-102
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -3 / +1
Query: 208 LLLSNYP*I*RCFW*E 161
LLL +YP*I*+CFW*E
Sbjct: 1078 LLLLSYP*I*QCFW*E 1125
Score = 30.9 bits (61), Expect(5) = 1e-053
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2 / +3
Query: 206 IIVQLPVNLAVLLVRG 159
I QLP+NLAVLLVRG
Sbjct: 1080 ITAQLPLNLAVLLVRG 1127
Score = 29.9 bits (59), Expect(6) = e-114
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1 / -1
Query: 160 PLTKSTARFTGNWTII 207
PLTKSTARF GN +I
Sbjct: 1126 PLTKSTARFKGN*AVI 1079
Score = 29.0 bits (57), Expect(6) = e-114
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / -1
Query: 209 ACMHLSWYMLAGQR 250
ACMHLSWY+ A R
Sbjct: 1060 ACMHLSWYVHASWR 1019
Score = 28.6 bits (56), Expect(7) = e-134
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / +3
Query: 240 ASMYQLRCMHAY 205
A YQLRCMHAY
Sbjct: 1029 ACTYQLRCMHAY 1064
Score = 28.1 bits (55), Expect(8) = 1e-076
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1 / -3
Query: 1108 RLLQQPVPALGEG 1146
RLL+QPV ALGEG
Sbjct: 86 RLLEQPVAALGEG 48
Score = 28.1 bits (55), Expect(7) = e-134
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / +2
Query: 297 NYCYVCKEG* 268
NYCYVCK+G*
Sbjct: 971 NYCYVCKKG* 1000
Score = 28.1 bits (55), Expect(6) = e-114
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -2
Query: 243 DKDYTAGYPTL 275
DKDYTAGYP L
Sbjct: 1020 DKDYTAGYPFL 988
Score = 28.1 bits (55), Expect(8) = 1e-076
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3 / -3
Query: 162 SHQKHR*IHG*LDNNK 209
SHQKH *I G*L +NK
Sbjct: 1124 SHQKHC*IQG*LSSNK 1077
Score = 26.7 bits (52), Expect(9) = e-102
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -3 / +2
Query: 250 SLSS*HVPTEMHACL 206
S +S +VPTEMHAC+
Sbjct: 1019 SPASMYVPTEMHACV 1063
Score = 26.3 bits (51), Expect(7) = e-134
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1 / +3
Query: 267 GNPLCNLC 244
GNPLCNLC
Sbjct: 996 GNPLCNLC 1019
Score = 25.4 bits (49), Expect(8) = 4e-050
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2 / -2
Query: 161 LSPKAPLDSRVIGQ**A 211
LSPKA LDSRV Q**+
Sbjct: 1125 LSPKALLDSRVTEQ**S 1075
Score = 24.9 bits (48), Expect(8) = 1e-076
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / -1
Query: 268 LPFLANITIV 297
LPFLANITIV
Sbjct: 1000 LPFLANITIV 971
Score = 24.4 bits (47), Expect(8) = 4e-050
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / -3
Query: 270 TLPCKHNNSFS 302
TL CKHNNS +
Sbjct: 998 TLSCKHNNSLA 966
Score = 24.0 bits (46), Expect(9) = e-102
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / +1
Query: 269 RVTRCVIFV 243
RVTRCVIFV
Sbjct: 994 RVTRCVIFV 1020
Score = 24.0 bits (46), Expect(8) = 1e-076
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2 / -1
Query: 245 QRLHSGLPY 271
QRLHSGLP+
Sbjct: 1018 QRLHSGLPF 992
Score = 23.1 bits (44), Expect(5) = 1e-053
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3 / +1
Query: 247 LSS*HVPTEMHACLLLSNY 191
+SS*HV T AC+ +S Y
Sbjct: 1018 VSS*HVRTN*DACMRISAY 1074
Score = 23.1 bits (44), Expect(9) = e-102
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / +3
Query: 296 TIVMFARKG 270
TIVMFARKG
Sbjct: 972 TIVMFARKG 998
Score = 23.1 bits (44), Expect(8) = 4e-050
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / -3
Query: 763 HKVALS*SDV 792
HKVALS*SDV
Sbjct: 431 HKVALS*SDV 402
Score = 23.1 bits (44), Expect(8) = 4e-050
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1 / -1
Query: 211 MHASQLVHASW 243
MH S VHASW
Sbjct: 1054 MHLSWYVHASW 1022
Score = 23.1 bits (44), Expect(8) = 1e-076
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / -2
Query: 210 HACISVGT 233
HACISVGT
Sbjct: 1059 HACISVGT 1036
Score = 22.1 bits (42), Expect(8) = 4e-050
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / -3
Query: 244 TKITQRVTL 270
TKITQRVTL
Sbjct: 1019 TKITQRVTL 993
>gb|CD233526.1|CD233526 SS1_2_G04.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_2_G04_A012 5', mRNA sequence
Length = 676
Score = 248 bits (536), Expect = 1e-064
Identities = 107/172 (62%), Positives = 133/172 (77%)
Frame = -1 / +1
Query: 1209 AKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYA 1030
A+MGRG VQL+RIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVA+IVFS KGKLYEY+
Sbjct: 157 AEMGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVALIVFSTKGKLYEYS 336
Query: 1029 SDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLE 850
S S M+ ILERY+RYS+ E+A++ E + NW EY +LK+K++ +Q+ + L+GE L+
Sbjct: 337 SHSSMEGILERYQRYSFEERAVLDPTIEDQANWGDEYVRLKSKLDALQKSQRQLLGEQLD 516
Query: 849 SLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQK 694
SL K LKHIRSRK+ LM +SISELQKKE++L ++N LQK
Sbjct: 517 SLTIKELQQLEQQLDSSLKHIRSRKNQLMFDSISELQKKEKALTDQNGVLQK 672
Score = 144 bits (309), Expect = 3e-033
Identities = 86/173 (49%), Positives = 94/173 (54%)
Frame = +2 / -3
Query: 692 SFCRAXXXXXXXXXXXXXXEIDSAIRWLFLDLMXXXXXXXXXXXXXXXFGFKDSRSSPIR 871
SFCR EI+S + FLDL+ F +S SP
Sbjct: 674 SFCRTPFWSVSAFSFF*SSEIESNMS*FFLDLICFKELSNCCSSCWSSFMVSESNCSPNS 495
Query: 872 CLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMRESEAYS*SLP 1051
CL S L F+ YS QF S A S+ E R *RSR+ SM E YS*S P
Sbjct: 494 CL*LF*SASSLDFNRTYSSPQFAWSSIVGSSTALSSNE*RW*RSRMPSMLEWLEYS*SFP 315
Query: 1052 LGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRPIFA 1210
L EKTM+ATSASQRTEIS AFFSSPFRRLEKVT R ILFSIR SCT PRPI A
Sbjct: 314 LVEKTMSATSASQRTEISWAFFSSPFRRLEKVTWRLILFSIRRSCTGPRPISA 156
>gb|CF480443.1|CF480443 POL1_65_G02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_65_G02_A002 5', mRNA sequence
Length = 758
Score = 248 bits (536), Expect = 1e-064
Identities = 107/172 (62%), Positives = 133/172 (77%)
Frame = -1 / +3
Query: 1209 AKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYA 1030
A+MGRG VQL+RIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVA+IVFS KGKLYEY+
Sbjct: 117 AEMGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVALIVFSTKGKLYEYS 296
Query: 1029 SDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLE 850
S S M+ ILERY+RYS+ E+A++ E + NW EY +LK+K++ +Q+ + L+GE L+
Sbjct: 297 SHSSMEGILERYQRYSFEERAVLDPTIEDQANWGDEYVRLKSKLDALQKSQRQLLGEQLD 476
Query: 849 SLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQK 694
SL K LKHIRSRK+ LM +SISELQKKE++L ++N LQK
Sbjct: 477 SLTIKELQQLEQQLDSSLKHIRSRKNQLMFDSISELQKKEKALTDQNGVLQK 632
Score = 144 bits (309), Expect = 3e-033
Identities = 86/173 (49%), Positives = 94/173 (54%)
Frame = +2 / -2
Query: 692 SFCRAXXXXXXXXXXXXXXEIDSAIRWLFLDLMXXXXXXXXXXXXXXXFGFKDSRSSPIR 871
SFCR EI+S + FLDL+ F +S SP
Sbjct: 634 SFCRTPFWSVSAFSFF*SSEIESNMS*FFLDLICFKELSNCCSSCWSSFMVSESNCSPNS 455
Query: 872 CLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMRESEAYS*SLP 1051
CL S L F+ YS QF S A S+ E R *RSR+ SM E YS*S P
Sbjct: 454 CL*LF*SASSLDFNRTYSSPQFAWSSIVGSSTALSSNE*RW*RSRMPSMLEWLEYS*SFP 275
Query: 1052 LGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRPIFA 1210
L EKTM+ATSASQRTEIS AFFSSPFRRLEKVT R ILFSIR SCT PRPI A
Sbjct: 274 LVEKTMSATSASQRTEISWAFFSSPFRRLEKVTWRLILFSIRRSCTGPRPISA 116
>gb|CD431694.1|CD431694 ETH1_10_G05.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_10_G05_A002 5', mRNA sequence
Length = 654
Score = 243 bits (524), Expect = 6e-063
Identities = 104/167 (62%), Positives = 130/167 (77%)
Frame = -1 / +2
Query: 1209 AKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYA 1030
A+MGRG VQL+RIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVA+IVFS KGKLYEY+
Sbjct: 146 AEMGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVALIVFSTKGKLYEYS 325
Query: 1029 SDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLE 850
S S M+ ILERY+RYS+ E+A++ E + NW EY +LK+K++ +Q+ + L+GE L+
Sbjct: 326 SHSSMEGILERYQRYSFEERAVLDPTIEDQANWGDEYVRLKSKLDALQKSQRQLLGEQLD 505
Query: 849 SLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEEN 709
SL K LKHIRSRK+ LM +SISELQKKE++L ++N
Sbjct: 506 SLTIKELQQLEQQLDSSLKHIRSRKNQLMFDSISELQKKEKALTDQN 646
Score = 139 bits (298), Expect = 9e-032
Identities = 82/154 (53%), Positives = 90/154 (58%)
Frame = +2 / -1
Query: 749 EIDSAIRWLFLDLMXXXXXXXXXXXXXXXFGFKDSRSSPIRCLWHLCMVSILAFSFLYSW 928
EI+S + FLDL+ F +S SP CL S L F+ YS
Sbjct: 606 EIESNMS*FFLDLICFKELSNCCSSCWSSFMVSESNCSPNSCL*LF*SASSLDFNRTYSS 427
Query: 929 HQFPSLSDSAEIRAFSA*EYRS*RSRILSMRESEAYS*SLPLGEKTMTATSASQRTEISC 1108
QF S A S+ E R *RSR+ SM E YS*S PL EKTM+ATSASQRTEIS
Sbjct: 426 PQFAWSSIVGSSTALSSNE*RW*RSRMPSMLEWLEYS*SFPLVEKTMSATSASQRTEISW 247
Query: 1109 AFFSSPFRRLEKVTCRFILFSIRFSCTLPRPIFA 1210
AFFSSPFRRLEKVT R ILFSIR SCT PRPI A
Sbjct: 246 AFFSSPFRRLEKVTWRLILFSIRRSCTGPRPISA 145
>gb|BG241308.1|BG241308 OV1_40_G05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 480
Score = 241 bits (520), Expect = 2e-062
Identities = 101/104 (97%), Positives = 104/104 (100%)
Frame = -1 / +2
Query: 1212 QAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEY 1033
++KMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEY
Sbjct: 167 RSKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEY 346
Query: 1032 ASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAK 901
A+DSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAK
Sbjct: 347 ATDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAK 478
Score = 221 bits (478), Expect = 1e-056
Identities = 98/102 (96%), Positives = 98/102 (96%)
Frame = +2 / -1
Query: 899 ILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMRESEAYS*SLPLGEKTMTAT 1078
ILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMRES AYS*SLPLGEKTMTAT
Sbjct: 480 ILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMRESVAYS*SLPLGEKTMTAT 301
Query: 1079 SASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRPI 1204
SASQRTEISCAF SSP RRLEKVTCRFILFSIR SCTLPRPI
Sbjct: 300 SASQRTEISCAFLSSPLRRLEKVTCRFILFSIRLSCTLPRPI 175
Score = 111 bits (237), Expect(2) = 4e-041
Identities = 51/53 (96%), Positives = 51/53 (96%)
Frame = -3 / +1
Query: 1057 PQGQALRVRLRLPHGQNSRTL*AIFLC*KGSYFS*I*K*GKLVPRIQETEGQN 899
PQGQAL VR RLPHGQNSRTL*AIFLC*KGSYFS*I*K*GKLVPRIQETEGQN
Sbjct: 322 PQGQAL*VRHRLPHGQNSRTL*AIFLC*KGSYFS*I*K*GKLVPRIQETEGQN 480
Score = 107 bits (229), Expect(2) = 8e-025
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = +3 / -2
Query: 900 FWPSVSCIRGTNFPHFQIQLK*EPFQHRNIAHNVLEFCPCGS 1025
FWPSVSCIRGT+FPHFQIQLK*EPFQHRNIAHNV EFCPCGS
Sbjct: 479 FWPSVSCIRGTSFPHFQIQLK*EPFQHRNIAHNVREFCPCGS 354
Score = 87.7 bits (185), Expect(2) = 1e-029
Identities = 37/39 (94%), Positives = 37/39 (94%)
Frame = -2 / +3
Query: 1016 WTKF*NVMSDIPMLKRLLFQLNLKVREIGATNTGN*RPK 900
WTKF NVMSDIPMLKRLLFQLNLKVRE GATNTGN*RPK
Sbjct: 363 WTKFSNVMSDIPMLKRLLFQLNLKVRETGATNTGN*RPK 479
Score = 79.0 bits (166), Expect(2) = 4e-041
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = -3 / +1
Query: 1234 ERKQRSEAGEDGARQGAAEADREQDKPAGDLLQAPERAAEEGA 1106
+R S + +DGARQGAA+ADREQDKPAGDLLQAP+RAA+EGA
Sbjct: 145 KRPSASRSEQDGARQGAAQADREQDKPAGDLLQAPQRAAQEGA 273
Score = 64.3 bits (134), Expect(2) = 1e-029
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = -2 / +3
Query: 1205 RWGAARCS*SG*RTR*TGR*PSPSAGTGC 1119
RWGAARCS SG*RTR*TGR*PSPSA TGC
Sbjct: 174 RWGAARCSSSG*RTR*TGR*PSPSAATGC 260
Score = 28.1 bits (55), Expect(2) = 8e-025
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1 / -3
Query: 1108 RLLQQPVPALGEG 1146
RLL+QPV ALGEG
Sbjct: 271 RLLEQPVAALGEG 233
>gb|BG240086.1|BG240086 OV1_17_G05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 476
Score = 238 bits (515), Expect = 1e-061
Identities = 100/103 (97%), Positives = 103/103 (100%)
Frame = -1 / +2
Query: 1212 QAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEY 1033
++KMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEY
Sbjct: 167 RSKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEY 346
Query: 1032 ASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKA 904
A+DSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKA
Sbjct: 347 ATDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKA 475
Score = 218 bits (470), Expect = 2e-055
Identities = 96/100 (96%), Positives = 96/100 (96%)
Frame = +2 / -3
Query: 905 AFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMRESEAYS*SLPLGEKTMTATSA 1084
AFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMRES AYS*SLPLGEKTMTATSA
Sbjct: 474 AFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMRESVAYS*SLPLGEKTMTATSA 295
Query: 1085 SQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRPI 1204
SQRTEISCAF SSP RRLEKVTCRFILFSIR SCTLPRPI
Sbjct: 294 SQRTEISCAFLSSPLRRLEKVTCRFILFSIRLSCTLPRPI 175
Score = 106 bits (226), Expect(2) = 1e-039
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = -3 / +1
Query: 1057 PQGQALRVRLRLPHGQNSRTL*AIFLC*KGSYFS*I*K*GKLVPRIQETEG 905
PQGQAL VR RLPHGQNSRTL*AIFLC*KGSYFS*I*K*GKLVPRIQETEG
Sbjct: 322 PQGQAL*VRHRLPHGQNSRTL*AIFLC*KGSYFS*I*K*GKLVPRIQETEG 474
Score = 105 bits (223), Expect(2) = 5e-024
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +3 / -1
Query: 903 WPSVSCIRGTNFPHFQIQLK*EPFQHRNIAHNVLEFCPCGS 1025
WPSVSCIRGT+FPHFQIQLK*EPFQHRNIAHNV EFCPCGS
Sbjct: 476 WPSVSCIRGTSFPHFQIQLK*EPFQHRNIAHNVREFCPCGS 354
Score = 85.4 bits (180), Expect(2) = 6e-029
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = -2 / +3
Query: 1016 WTKF*NVMSDIPMLKRLLFQLNLKVREIGATNTGN*RP 903
WTKF NVMSDIPMLKRLLFQLNLKVRE GATNTGN*RP
Sbjct: 363 WTKFSNVMSDIPMLKRLLFQLNLKVRETGATNTGN*RP 476
Score = 79.0 bits (166), Expect(2) = 1e-039
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = -3 / +1
Query: 1234 ERKQRSEAGEDGARQGAAEADREQDKPAGDLLQAPERAAEEGA 1106
+R S + +DGARQGAA+ADREQDKPAGDLLQAP+RAA+EGA
Sbjct: 145 KRPSASRSEQDGARQGAAQADREQDKPAGDLLQAPQRAAQEGA 273
Score = 64.3 bits (134), Expect(2) = 6e-029
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = -2 / +3
Query: 1205 RWGAARCS*SG*RTR*TGR*PSPSAGTGC 1119
RWGAARCS SG*RTR*TGR*PSPSA TGC
Sbjct: 174 RWGAARCSSSG*RTR*TGR*PSPSAATGC 260
Score = 28.1 bits (55), Expect(2) = 5e-024
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1 / -2
Query: 1108 RLLQQPVPALGEG 1146
RLL+QPV ALGEG
Sbjct: 271 RLLEQPVAALGEG 233
>gb|U49734.1|SBU49734 Sorghum bicolor MADS box transcription factor SbMADS1 mRNA, complete
cds
Length = 1055
Score = 206 bits (445), Expect = 5e-052
Identities = 90/179 (50%), Positives = 128/179 (71%)
Frame = -1 / +1
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLYE+ S
Sbjct: 46 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSG 225
Query: 1023 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESL 844
+ K LERYE++ + A+ + E+E + +EY KLKA+++ +QR ++L+GEDL SL
Sbjct: 226 QSITKTLERYEKHMRPDTAVQNKENELVQSSRNEYLKLKARVDNLQRTQRNLLGEDLGSL 405
Query: 843 NPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELSERQKAV 667
K L+HIRS ++ M + +++LQ++E+ L E NK L+++L E V
Sbjct: 406 GIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRKLEETSNQV 582
>gb|CF431741.1|CF431741 NIT1_10_D03.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_10_D03_A002 5', mRNA sequence
Length = 457
Score = 197 bits (424), Expect = 4e-049
Identities = 81/122 (66%), Positives = 101/122 (82%)
Frame = -1 / +2
Query: 1209 AKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYA 1030
A+MGRG V L+RIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVA+IVFS KGKLYEY+
Sbjct: 86 AEMGRGPVPLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVALIVFSAKGKLYEYS 265
Query: 1029 SDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLE 850
S S M+ ILERY+RYS+ E+A++ E + NW EY +LK+K++ +Q+ + L+GE L+
Sbjct: 266 SHSSMEGILERYQRYSFEERAVLDPTIEDQANWGDEYVRLKSKLDALQKSQRQLLGEQLD 445
Query: 849 SL 844
SL
Sbjct: 446 SL 451
Score = 127 bits (272), Expect = 3e-028
Identities = 73/121 (60%), Positives = 78/121 (64%)
Frame = +2 / -2
Query: 848 DSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMRES 1027
+S SP CL S L F+ YS QF S A S+ E R *RSR+ SM E
Sbjct: 447 ESNCSPNSCL*LF*SASSLDFNRTYSSPQFAWSSIVGSSTALSSNE*RW*RSRMPSMLEW 268
Query: 1028 EAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRPIF 1207
YS*S PL EKTM+ATSASQRTEIS AFFSSPFRRLEKVT R ILFSIR S T PRPI
Sbjct: 267 LEYS*SFPLAEKTMSATSASQRTEISWAFFSSPFRRLEKVTWRLILFSIRRSGTGPRPIS 88
Query: 1208 A 1210
A
Sbjct: 87 A 85
>gb|AY827471.1| Sorghum bicolor MADS box transcription factor mRNA, partial cds
Length = 829
Score = 115 bits (246), Expect(2) = 9e-042
Identities = 47/80 (58%), Positives = 66/80 (82%)
Frame = -1 / +1
Query: 1185 QLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASDSRMDKI 1006
+++RIENKI+RQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +G+L+E+++ S K
Sbjct: 1 EMRRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGRLFEFSTSSCTYKT 180
Query: 1005 LERYERYSYAEKALISAESE 946
LERY ++A +A E+E
Sbjct: 181 LERYRSCNFASEASAPLEAE 240
Score = 77.1 bits (162), Expect(2) = 9e-042
Identities = 37/90 (41%), Positives = 54/90 (60%)
Frame = -1 / +1
Query: 960 SAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRS 781
SA E+E N EY KLK K+E +Q ++L+GEDL LN K LKHIRS
Sbjct: 220 SAPLEAELNNYQEYLKLKTKVEFLQTTQRNLLGEDLGPLNVKELEQLENQIEISLKHIRS 399
Query: 780 RKSHLMAESISELQKKERSLQEENKALQKE 691
K+ M + + +L++KE+ LQ+ NK L+++
Sbjct: 400 SKNRQMLDQLFDLKRKEQQLQDANKDLRRK 489
>gb|AY597522.1| Sorghum bicolor leafy hull sterile 1 (LHS1) mRNA, partial cds
Length = 669
Score = 107 bits (229), Expect(2) = 6e-035
Identities = 43/68 (63%), Positives = 59/68 (86%)
Frame = -1 / +1
Query: 1173 IENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASDSRMDKILERY 994
IENKI+RQVTF+KRRNGLLKKA+E+S++CDAEVA+I+FS +G+L+E++S S M K LERY
Sbjct: 1 IENKISRQVTFAKRRNGLLKKAYELSLMCDAEVALIIFSGRGRLFEFSSSSCMYKTLERY 180
Query: 993 ERYSYAEK 970
+Y+ +
Sbjct: 181 RSSNYSSQ 204
Score = 62.0 bits (129), Expect(2) = 6e-035
Identities = 27/81 (33%), Positives = 49/81 (60%)
Frame = -1 / +1
Query: 924 EYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISE 745
+Y KL+ ++E +Q ++++GE L L+ K LK IRSR++ ++ + + +
Sbjct: 244 DYLKLRTRVEFLQTTQRNILGEVLGPLSMKELEQLENQIETSLKQIRSRENQMLLDQLFD 423
Query: 744 LQKKERSLQEENKALQKELSE 682
L+ KE+ LQ+ NK L+K+L E
Sbjct: 424 LKSKEQELQDLNKDLRKKLQE 486
>gb|BG048737.1|BG048737 OV1_22_D05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 407
Score = 122 bits (261), Expect(2) = 4e-034
Identities = 49/65 (75%), Positives = 60/65 (92%)
Frame = -1 / +3
Query: 1221 DRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKL 1042
+ ++ MGRG+V+LKRIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVA+I+FS +GKL
Sbjct: 27 EEKEIVMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKL 206
Query: 1041 YEYAS 1027
YE+ S
Sbjct: 207 YEFGS 221
Score = 44.6 bits (91), Expect(2) = 4e-034
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -1 / +3
Query: 936 NWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPK 835
+W E KL+AK E +QR +HL+GEDL L+ K
Sbjct: 306 SWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVK 407
>gb|CW322676.1|CW322676 104_816_11476224_116_35954_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476224, DNA
sequence
Length = 609
Score = 146 bits (314), Expect = 6e-034
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = -1 / +1
Query: 1212 QAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEY 1033
++KMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEY
Sbjct: 382 RSKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEY 561
Query: 1032 ASDSR 1018
A+DSR
Sbjct: 562 ATDSR 576
Score = 133 bits (286), Expect = 4e-030
Identities = 58/62 (93%), Positives = 58/62 (93%)
Frame = +2 / -2
Query: 1019 RESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPR 1198
RES AYS*SLPLGEKTMTATSASQRTEISCAF SSP RRLEKVTCRFILFSIR SCTLPR
Sbjct: 575 RESVAYS*SLPLGEKTMTATSASQRTEISCAFLSSPLRRLEKVTCRFILFSIRLSCTLPR 396
Query: 1199 PI 1204
PI
Sbjct: 395 PI 390
>gb|CW359630.1|CW359630 fsbb001f027f15k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f027f15, DNA
sequence
Length = 672
Score = 146 bits (314), Expect = 6e-034
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = -1 / +3
Query: 1212 QAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEY 1033
++KMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEY
Sbjct: 93 RSKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEY 272
Query: 1032 ASDSR 1018
A+DSR
Sbjct: 273 ATDSR 287
Score = 133 bits (286), Expect = 4e-030
Identities = 58/62 (93%), Positives = 58/62 (93%)
Frame = +2 / -3
Query: 1019 RESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPR 1198
RES AYS*SLPLGEKTMTATSASQRTEISCAF SSP RRLEKVTCRFILFSIR SCTLPR
Sbjct: 286 RESVAYS*SLPLGEKTMTATSASQRTEISCAFLSSPLRRLEKVTCRFILFSIRLSCTLPR 107
Query: 1199 PI 1204
PI
Sbjct: 106 PI 101
>gb|BE918053.1|BE918053 OV1_1_C11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 561
Score = 138 bits (296), Expect = 2e-031
Identities = 58/93 (62%), Positives = 73/93 (78%)
Frame = -1 / +1
Query: 1218 RRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLY 1039
R MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLY
Sbjct: 28 RAATNMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLY 207
Query: 1038 EYASDSRMDKILERYERYSYAEKALISAESESE 940
E++S M K LE+Y++ S+A E+E
Sbjct: 208 EFSSTQSMPKTLEKYQKCSFAGPETAVQNRENE 306
Score = 79.9 bits (168), Expect(2) = 1e-022
Identities = 37/94 (39%), Positives = 58/94 (61%)
Frame = -1 / +1
Query: 975 EKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXL 796
E A+ + E+E + +EY KLKA+++ +QR ++L+GEDLESL K L
Sbjct: 277 ETAVQNRENEQLKSSRNEYLKLKARVDNLQRTQRNLLGEDLESLGIKELEHLEKQLDSSL 456
Query: 795 KHIRSRKSHLMAESISELQKKERSLQEENKALQK 694
KHIRS ++ M + ++ELQK+E+ E NK L++
Sbjct: 457 KHIRSTRTQHMVDQLTELQKREQMFCEANKCLRR 558
Score = 51.5 bits (106), Expect(2) = 1e-022
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = -3 / +3
Query: 1228 KQRSEAGEDGARQGAAEADREQDKPAGDLLQAPERAAEEG 1109
++R E G G A+ADREQD+P G L QAP+R A+EG
Sbjct: 18 RRRQGGDEHGEGAGRAQADREQDQPPGHLRQAPQRPAQEG 137
>gb|BE918762.1|BE918762 OV1_4_F11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 548
Score = 138 bits (296), Expect = 2e-031
Identities = 58/93 (62%), Positives = 73/93 (78%)
Frame = -1 / +1
Query: 1218 RRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLY 1039
R MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLY
Sbjct: 28 RAATNMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLY 207
Query: 1038 EYASDSRMDKILERYERYSYAEKALISAESESE 940
E++S M K LE+Y++ S+A E+E
Sbjct: 208 EFSSTQSMPKTLEKYQKCSFAGPETAVQNRENE 306
Score = 76.7 bits (161), Expect(2) = 6e-021
Identities = 36/90 (40%), Positives = 55/90 (61%)
Frame = -1 / +1
Query: 975 EKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXL 796
E A+ + E+E + +EY KLKA+++ +QR ++L+GEDLESL K L
Sbjct: 277 ETAVQNRENEQLKSSRNEYLKLKARVDNLQRTQRNLLGEDLESLGIKELEHLEKQLDSSL 456
Query: 795 KHIRSRKSHLMAESISELQKKERSLQEENK 706
KHIRS ++ M + ++ELQK+E+ E NK
Sbjct: 457 KHIRSTRTQHMVDQLTELQKREQMFCEANK 546
Score = 48.7 bits (100), Expect(2) = 6e-021
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = -3 / +3
Query: 1228 KQRSEAGEDGARQGAAEADREQDKPAGDLLQAPERAAEE 1112
++R E G G A+ADREQD+P G L QAP+R A+E
Sbjct: 18 RRRQGGDEHGEGAGRAQADREQDQPPGHLRQAPQRPAQE 134
>gb|BG357222.1|BG357222 OV2_11_C11.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 538
Score = 138 bits (296), Expect = 2e-031
Identities = 58/93 (62%), Positives = 73/93 (78%)
Frame = -1 / +3
Query: 1218 RRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLY 1039
R MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLY
Sbjct: 144 RAATNMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLY 323
Query: 1038 EYASDSRMDKILERYERYSYAEKALISAESESE 940
E++S M K LE+Y++ S+A E+E
Sbjct: 324 EFSSTQSMPKTLEKYQKCSFAGPETAVQNRENE 422
>gb|CW481370.1|CW481370 fsbb001f240o12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f240o12, DNA
sequence
Length = 722
Score = 137 bits (293), Expect = 4e-031
Identities = 57/71 (80%), Positives = 64/71 (90%)
Frame = -1 / -3
Query: 1233 KGSRDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSP 1054
+G + A MGRGKVQLKRIENKINRQVTFSKRR+GLLKKAHEISVLCDAEVA+I+FS
Sbjct: 375 EGEEEEEAAAMGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIIFST 196
Query: 1053 KGKLYEYASDS 1021
KGKLYEY++DS
Sbjct: 195 KGKLYEYSTDS 163
Score = 110 bits (235), Expect = 4e-023
Identities = 52/70 (74%), Positives = 54/70 (77%)
Frame = +2 / +2
Query: 1022 ESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRP 1201
ES YS*SLPL EK ++ATSASQ TEISCAF SSP RRLEKVT R ILFSIRFSCT PRP
Sbjct: 164 ESVEYS*SLPLVEKMISATSASQSTEISCAFLSSPERRLEKVTWRLILFSIRFSCTFPRP 343
Query: 1202 IFACLRSLLP 1231
I A S P
Sbjct: 344 IAAASSSSSP 373
>gb|BI098309.1|BI098309 IP1_30_G10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 509
Score = 136 bits (291), Expect = 8e-031
Identities = 57/88 (64%), Positives = 70/88 (79%)
Frame = -1 / +3
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLYE+ S
Sbjct: 183 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSG 362
Query: 1023 SRMDKILERYERYSYAEKALISAESESE 940
+ K LERYE+ +Y E+E
Sbjct: 363 QSITKTLERYEKSNYGGPDTAVQNKENE 446
>gb|BG948060.1|BG948060 IP1_8_H04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 440
Score = 135 bits (290), Expect = 1e-030
Identities = 55/75 (73%), Positives = 67/75 (89%)
Frame = -1 / +3
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLYE+ S
Sbjct: 186 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSG 365
Query: 1023 SRMDKILERYERYSY 979
+ K LERYE+ +Y
Sbjct: 366 QSITKTLERYEKSNY 410
>gb|CW230669.1|CW230669 104_679_11210696_116_37485_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11210696, DNA
sequence
Length = 567
Score = 133 bits (285), Expect = 6e-030
Identities = 57/64 (89%), Positives = 61/64 (95%)
Frame = -1 / -2
Query: 1209 AKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYA 1030
A+MGRG VQL+RIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVA+IVFS KGKLYEY+
Sbjct: 341 AEMGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVALIVFSTKGKLYEYS 162
Query: 1029 SDSR 1018
S SR
Sbjct: 161 SHSR 150
Score = 107 bits (228), Expect = 4e-022
Identities = 50/59 (84%), Positives = 51/59 (86%)
Frame = +2 / +1
Query: 1034 YS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRPIFA 1210
YS*S PL EKTM+ATSASQRTEIS AFFSSPFRRLEKVT R ILFSIR SCT PRPI A
Sbjct: 166 YS*SFPLVEKTMSATSASQRTEISWAFFSSPFRRLEKVTWRLILFSIRRSCTGPRPISA 342
>gb|BG054385.1|BG054385 OV2_3_G06.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 377
Score = 133 bits (284), Expect = 8e-030
Identities = 54/76 (71%), Positives = 66/76 (86%)
Frame = -1 / +1
Query: 1218 RRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLY 1039
R MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLY
Sbjct: 148 RAATNMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLY 327
Query: 1038 EYASDSRMDKILERYE 991
E++S M K LE+Y+
Sbjct: 328 EFSSTQSMPKTLEKYQ 375
>gb|CW361341.1|CW361341 fsbb001f029n10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f029n10, DNA
sequence
Length = 780
Score = 79.4 bits (167), Expect(3) = 1e-029
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = -3 / +3
Query: 877 QAPDGRGSRVFESKRAPTTRAAAGELTEAHQIKK 776
QAPDGRGSRVFES+RAPTTRAAAGELTEAHQIKK
Sbjct: 474 QAPDGRGSRVFESQRAPTTRAAAGELTEAHQIKK 575
Score = 62.0 bits (129), Expect(3) = 1e-029
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = -1 / +1
Query: 942 EGNWCHEYRKLKAKIETIQRCHK 874
+GNWCHEYRKLKAKIETIQ+CHK
Sbjct: 268 QGNWCHEYRKLKAKIETIQKCHK 336
Score = 33.6 bits (67), Expect(3) = 1e-029
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -1 / +2
Query: 777 KSHLMAESISELQKK 733
+SHLMAESISELQKK
Sbjct: 719 QSHLMAESISELQKK 763
>gb|BG357245.1|BG357245 OV2_11_F01.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 435
Score = 131 bits (280), Expect = 3e-029
Identities = 54/88 (61%), Positives = 73/88 (82%)
Frame = -1 / +1
Query: 1233 KGSRDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSP 1054
+ ++ R MGRGKV+LKRIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA+I+FS
Sbjct: 34 RDAKQAR*EDMGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSG 213
Query: 1053 KGKLYEYASDSRMDKILERYERYSYAEK 970
+G+L+E++S S M K LERY +Y+ +
Sbjct: 214 RGRLFEFSSSSCMYKTLERYRSSNYSSQ 297
>gb|CW032589.1|CW032589 104_261_10501470_114_30363 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10501470, DNA
sequence
Length = 719
Score = 95.5 bits (202), Expect(2) = 3e-029
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -1 / -1
Query: 1140 SKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASDSR 1018
SKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYA+DSR
Sbjct: 563 SKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYATDSR 441
Score = 86.3 bits (182), Expect(2) = 1e-025
Identities = 38/42 (90%), Positives = 39/42 (92%)
Frame = +2 / +1
Query: 1019 RESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEK 1144
RES AYS*SLPLGEKTMTATSASQRTEISCAF SSP RRLE+
Sbjct: 442 RESVAYS*SLPLGEKTMTATSASQRTEISCAFLSSPLRRLER 567
Score = 55.1 bits (114), Expect(2) = 3e-029
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = -3 / -1
Query: 1234 ERKQRSEAGEDGARQGAAEADREQDKPAGDL 1142
+R S + +DGARQGAA+ADREQDKPAGDL
Sbjct: 656 KRPSASRSEQDGARQGAAQADREQDKPAGDL 564
Score = 52.4 bits (108), Expect(2) = 1e-025
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = +2 / +3
Query: 1124 PFRRLEKVTCRFILFSIRFSCTLPRPI 1204
P L +VTCRFILFSIR SCTLPRPI
Sbjct: 546 PVAALGEVTCRFILFSIRLSCTLPRPI 626
>gb|BM324751.1|BM324751 PIC1_35_B11.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 421
Score = 127 bits (271), Expect = 5e-028
Identities = 52/76 (68%), Positives = 64/76 (84%)
Frame = -1 / +1
Query: 1209 AKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYA 1030
A M RGK +LKRIEN +RQVTFSKRRNGLLKKA+E+SVLCDAEV +IVFSP+GKLYE+A
Sbjct: 157 ATMVRGKTELKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVGLIVFSPRGKLYEFA 336
Query: 1029 SDSRMDKILERYERYS 982
S + + K ++RY Y+
Sbjct: 337 SAASLQKTIDRYRTYT 384
>gb|CD429087.1|CD429087 ETH1_2_E10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_2_E10_A002 5', mRNA sequence
Length = 447
Score = 127 bits (271), Expect = 5e-028
Identities = 52/76 (68%), Positives = 64/76 (84%)
Frame = -1 / +2
Query: 1209 AKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYA 1030
A M RGK +LKRIEN +RQVTFSKRRNGLLKKA+E+SVLCDAEV +IVFSP+GKLYE+A
Sbjct: 194 ATMVRGKTELKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVGLIVFSPRGKLYEFA 373
Query: 1029 SDSRMDKILERYERYS 982
S + + K ++RY Y+
Sbjct: 374 SAASLQKTIDRYRTYT 421
>gb|CW034003.1|CW034003 104_263_10502289_114_30359 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502289, DNA
sequence
Length = 697
Score = 122 bits (262), Expect = 8e-027
Identities = 50/67 (74%), Positives = 60/67 (89%)
Frame = -1 / -1
Query: 1218 RRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLY 1039
R MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLY
Sbjct: 466 RAATNMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLY 287
Query: 1038 EYASDSR 1018
E++S R
Sbjct: 286 EFSSTQR 266
>gb|CW034004.1|CW034004 104_263_10502289_115_30360 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502289, DNA
sequence
Length = 716
Score = 122 bits (262), Expect = 8e-027
Identities = 50/67 (74%), Positives = 60/67 (89%)
Frame = -1 / +1
Query: 1218 RRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLY 1039
R MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLY
Sbjct: 451 RAATNMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLY 630
Query: 1038 EYASDSR 1018
E++S R
Sbjct: 631 EFSSTQR 651
>gb|CW365810.1|CW365810 fsbb001f038i06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038i06, DNA
sequence
Length = 725
Score = 122 bits (262), Expect = 8e-027
Identities = 50/67 (74%), Positives = 60/67 (89%)
Frame = -1 / -1
Query: 1218 RRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLY 1039
R MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLY
Sbjct: 719 RAATNMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLY 540
Query: 1038 EYASDSR 1018
E++S R
Sbjct: 539 EFSSTQR 519
>gb|CW081771.1|CW081771 104_422_10942807_114_32316_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942807, DNA
sequence
Length = 682
Score = 121 bits (258), Expect = 3e-026
Identities = 49/62 (79%), Positives = 58/62 (93%)
Frame = -1 / -3
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLYE+ S
Sbjct: 551 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSG 372
Query: 1023 SR 1018
R
Sbjct: 371 QR 366
>gb|CW081772.1|CW081772 104_422_10942807_114_32345_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942807, DNA
sequence
Length = 712
Score = 121 bits (258), Expect = 3e-026
Identities = 49/62 (79%), Positives = 58/62 (93%)
Frame = -1 / -3
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLYE+ S
Sbjct: 551 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSG 372
Query: 1023 SR 1018
R
Sbjct: 371 QR 366
>gb|CW275678.1|CW275678 104_749_11405089_148_35390_013 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405089, DNA
sequence
Length = 744
Score = 119 bits (254), Expect = 1e-025
Identities = 47/65 (72%), Positives = 56/65 (86%)
Frame = -1 / +2
Query: 1221 DRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKL 1042
+RR +MGRGK+++KRIEN NRQVTFSKRRNG+LKKA EISVLCDAEV V++FS GKL
Sbjct: 107 ERRGGRMGRGKIEIKRIENSTNRQVTFSKRRNGILKKAREISVLCDAEVGVVIFSSAGKL 286
Query: 1041 YEYAS 1027
Y+Y S
Sbjct: 287 YDYCS 301
>gb|CW344565.1|CW344565 104_847_11488020_148_36203_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488020, DNA
sequence
Length = 575
Score = 119 bits (254), Expect = 1e-025
Identities = 48/59 (81%), Positives = 57/59 (96%)
Frame = -1 / -1
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYAS 1027
MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLYE+ S
Sbjct: 182 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 6
>gb|BE918857.1|BE918857 FM1_1_A12.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 530
Score = 117 bits (250), Expect = 4e-025
Identities = 47/62 (75%), Positives = 57/62 (91%)
Frame = -1 / +1
Query: 1206 KMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYAS 1027
K GRGK+++KRIEN NRQVTF KRRNGLLKKA+E+SVLCDAEVA+IVFS +G+LYEYA+
Sbjct: 124 KQGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 303
Query: 1026 DS 1021
+S
Sbjct: 304 NS 309
>gb|BE918862.1|BE918862 FM1_1_B06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 515
Score = 117 bits (250), Expect = 4e-025
Identities = 47/62 (75%), Positives = 57/62 (91%)
Frame = -1 / +1
Query: 1206 KMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYAS 1027
K GRGK+++KRIEN NRQVTF KRRNGLLKKA+E+SVLCDAEVA+IVFS +G+LYEYA+
Sbjct: 124 KQGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 303
Query: 1026 DS 1021
+S
Sbjct: 304 NS 309
>gb|BF317935.1|BF317935 OV1_9_F09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 551
Score = 117 bits (250), Expect = 4e-025
Identities = 47/62 (75%), Positives = 57/62 (91%)
Frame = -1 / +3
Query: 1206 KMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYAS 1027
K GRGK+++KRIEN NRQVTF KRRNGLLKKA+E+SVLCDAEVA+IVFS +G+LYEYA+
Sbjct: 222 KQGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 401
Query: 1026 DS 1021
+S
Sbjct: 402 NS 407
>gb|BF657168.1|BF657168 OV2_21_E10.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 474
Score = 117 bits (250), Expect = 4e-025
Identities = 47/62 (75%), Positives = 57/62 (91%)
Frame = -1 / +3
Query: 1206 KMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYAS 1027
K GRGK+++KRIEN NRQVTF KRRNGLLKKA+E+SVLCDAEVA+IVFS +G+LYEYA+
Sbjct: 66 KQGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 245
Query: 1026 DS 1021
+S
Sbjct: 246 NS 251
>gb|BF657564.1|BF657564 OV2_23_G05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 434
Score = 117 bits (250), Expect = 4e-025
Identities = 47/62 (75%), Positives = 57/62 (91%)
Frame = -1 / +1
Query: 1206 KMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYAS 1027
K GRGK+++KRIEN NRQVTF KRRNGLLKKA+E+SVLCDAEVA+IVFS +G+LYEYA+
Sbjct: 160 KQGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 339
Query: 1026 DS 1021
+S
Sbjct: 340 NS 345
>gb|BF657695.1|BF657695 OV2_20_F03.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 508
Score = 117 bits (250), Expect = 4e-025
Identities = 47/62 (75%), Positives = 57/62 (91%)
Frame = -1 / +3
Query: 1206 KMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYAS 1027
K GRGK+++KRIEN NRQVTF KRRNGLLKKA+E+SVLCDAEVA+IVFS +G+LYEYA+
Sbjct: 150 KQGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 329
Query: 1026 DS 1021
+S
Sbjct: 330 NS 335
>gb|BF657741.1|BF657741 OV2_17_D12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 572
Score = 117 bits (250), Expect = 4e-025
Identities = 47/62 (75%), Positives = 57/62 (91%)
Frame = -1 / +3
Query: 1206 KMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYAS 1027
K GRGK+++KRIEN NRQVTF KRRNGLLKKA+E+SVLCDAEVA+IVFS +G+LYEYA+
Sbjct: 168 KQGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 347
Query: 1026 DS 1021
+S
Sbjct: 348 NS 353
>gb|BG240312.1|BG240312 OV1_20_E03.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 436
Score = 117 bits (250), Expect = 4e-025
Identities = 47/62 (75%), Positives = 57/62 (91%)
Frame = -1 / +2
Query: 1206 KMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYAS 1027
K GRGK+++KRIEN NRQVTF KRRNGLLKKA+E+SVLCDAEVA+IVFS +G+LYEYA+
Sbjct: 170 KQGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 349
Query: 1026 DS 1021
+S
Sbjct: 350 NS 355
>gb|BG412023.1|BG412023 OV2_37_A12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 507
Score = 117 bits (250), Expect = 4e-025
Identities = 47/62 (75%), Positives = 57/62 (91%)
Frame = -1 / +3
Query: 1206 KMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYAS 1027
K GRGK+++KRIEN NRQVTF KRRNGLLKKA+E+SVLCDAEVA+IVFS +G+LYEYA+
Sbjct: 126 KQGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 305
Query: 1026 DS 1021
+S
Sbjct: 306 NS 311
>gb|CW461504.1|CW461504 fsbb001f209d06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f209d06, DNA
sequence
Length = 779
Score = 116 bits (249), Expect = 5e-025
Identities = 46/62 (74%), Positives = 60/62 (96%)
Frame = -1 / -3
Query: 1206 KMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYAS 1027
+MGRGKV+LKRIENKI+RQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +G+L+E+++
Sbjct: 507 EMGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGRLFEFST 328
Query: 1026 DS 1021
S
Sbjct: 327 SS 322
>gb|CW280818.1|CW280818 104_756_11407834_116_35450_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11407834, DNA
sequence
Length = 575
Score = 116 bits (248), Expect = 7e-025
Identities = 47/70 (67%), Positives = 62/70 (88%)
Frame = -1 / -1
Query: 1227 SRDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKG 1048
S +R Q MGRGKV L+RIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA+++FS G
Sbjct: 299 SIERDQTTMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAG 120
Query: 1047 KLYEYASDSR 1018
+LY+++S S+
Sbjct: 119 RLYQFSSSSK 90
>gb|CW296811.1|CW296811 104_778_11461713_116_35630_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461713, DNA
sequence
Length = 684
Score = 116 bits (248), Expect = 7e-025
Identities = 47/70 (67%), Positives = 62/70 (88%)
Frame = -1 / +1
Query: 1227 SRDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKG 1048
S +R Q MGRGKV L+RIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA+++FS G
Sbjct: 142 SIERDQTTMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAG 321
Query: 1047 KLYEYASDSR 1018
+LY+++S S+
Sbjct: 322 RLYQFSSSSK 351
>gb|CW332085.1|CW332085 104_829_11481239_148_36028_086 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481239, DNA
sequence
Length = 584
Score = 116 bits (248), Expect = 7e-025
Identities = 49/64 (76%), Positives = 57/64 (89%)
Frame = -1 / -3
Query: 1209 AKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYA 1030
A M RGK +LKRIEN +RQVTFSKRRNGLLKKA+E+SVLCDAEV +IVFSP+GKLYE+A
Sbjct: 447 ATMVRGKTELKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVGLIVFSPRGKLYEFA 268
Query: 1029 SDSR 1018
S +R
Sbjct: 267 SAAR 256
>gb|CW405640.1|CW405640 fsbb001f098e17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f098e17, DNA
sequence
Length = 631
Score = 116 bits (248), Expect = 7e-025
Identities = 49/64 (76%), Positives = 57/64 (89%)
Frame = -1 / -1
Query: 1209 AKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYA 1030
A M RGK +LKRIEN +RQVTFSKRRNGLLKKA+E+SVLCDAEV +IVFSP+GKLYE+A
Sbjct: 364 ATMVRGKTELKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVGLIVFSPRGKLYEFA 185
Query: 1029 SDSR 1018
S +R
Sbjct: 184 SAAR 173
>gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-like protein 1, phytochelatin
synthetase-like protein 2, and cytochrome b5 (Cyb5) genes,
complete cds; and MADS box protein AGLG1 (Aglg1) gene,
partial cds
Length = 23102
Score = 116 bits (248), Expect = 7e-025
Identities = 47/70 (67%), Positives = 62/70 (88%)
Frame = -1 / +1
Query: 1227 SRDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKG 1048
S +R Q MGRGKV L+RIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA+++FS G
Sbjct: 21583 SIERDQTTMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAG 21762
Query: 1047 KLYEYASDSR 1018
+LY+++S S+
Sbjct: 21763 RLYQFSSSSK 21792
>gb|CW380917.1|CW380917 fsbb001f062a07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f062a07, DNA
sequence
Length = 270
Score = 116 bits (247), Expect = 1e-024
Identities = 50/67 (74%), Positives = 57/67 (85%)
Frame = -1 / -1
Query: 1227 SRDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKG 1048
SR + MGRG+V+LKRIENKINRQVT SKRRNGLLKKA+E+SVLC AEVA+IVFS +G
Sbjct: 261 SRRPSEVAMGRGRVELKRIENKINRQVTLSKRRNGLLKKAYELSVLCGAEVALIVFSSRG 82
Query: 1047 KLYEYAS 1027
KLYE S
Sbjct: 81 KLYELGS 61
>gb|CL166695.1|CL166695 104_362_10809549_114_31798_381 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809549, DNA
sequence
Length = 690
Score = 115 bits (246), Expect = 1e-024
Identities = 46/61 (75%), Positives = 56/61 (91%)
Frame = -1 / -3
Query: 1206 KMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYAS 1027
K GRGK+++KRIEN NRQVTF KRRNGLLKKA+E+SVLCDAEVA+IVFS +G+LYEYA+
Sbjct: 619 KQGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 440
Query: 1026 D 1024
+
Sbjct: 439 N 437
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,178,789,775
Number of Sequences: 832831
Number of extensions: 14478172
Number of successful extensions: 82210
Number of sequences better than 1.0e-020: 106
length of database: 163,786,556
effective HSP length: 56
effective length of database: 117,148,020
effective search space used: 42993323340
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)