TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3742446.2.1
(598 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CL167736.1|CL167736 104_364_10810290_116_31803_354 Sorgh... 165 6e-061
gb|BF587276.1|BF587276 FM1_34_D09.b1_A003 Floral-Induced Me... 203 9e-054
gb|CW267997.1|CW267997 104_738_11401044_148_35300_040 Sorgh... 93 2e-050
gb|CF487437.1|CF487437 POL1_43_F12.g1_A002 Pollen Sorghum b... 136 3e-049
gb|CW426317.1|CW426317 fsbb001f137k07k0 Sorghum methylation... 165 2e-048
gb|BM324257.1|BM324257 PIC1_26_B11.b1_A002 Pathogen-infecte... 172 2e-044
gb|CW135560.1|CW135560 104_520_11117914_148_34833_043 Sorgh... 111 3e-043
gb|AW671741.1|AW671741 LG1_351_F12.b1_A002 Light Grown 1 (L... 102 3e-039
gb|CN124070.1|CN124070 RHOH1_2_A09.g1_A002 Acid- and alkali... 99 4e-039
gb|CW135559.1|CW135559 104_520_11117914_116_34837_043 Sorgh... 122 1e-036
gb|CW398117.1|CW398117 fsbb001f087g20k0 Sorghum methylation... 84 2e-036
gb|BG050964.1|BG050964 FM1_54_E04.b1_A003 Floral-Induced Me... 147 2e-034
gb|AF253508.1|AF253508 Sorghum bicolor cyanogenic beta-gluc... 86 4e-034
gb|CN145790.1|CN145790 WOUND1_35_F12.b1_A002 Wounded leaves... 86 4e-034
gb|CN148176.1|CN148176 WOUND1_54_D09.g1_A002 Wounded leaves... 86 4e-034
gb|CW339175.1|CW339175 104_839_11485133_148_36135_019 Sorgh... 78 2e-033
gb|CD232926.1|CD232926 SS1_10_A10.g1_A012 Salt-stressed see... 80 4e-032
gb|CD208589.1|CD208589 HS1_38_B10.g1_A012 Heat-shocked seed... 86 1e-031
gb|CD432578.1|CD432578 ETH1_30_D10.g1_A002 Ethylene-treated... 79 2e-031
gb|BE125777.1|BE125777 DG1_57_B08.b1_A002 Dark Grown 1 (DG1... 136 2e-031
gb|CW493896.1|CW493896 fsbb001f284o06k0 Sorghum methylation... 65 1e-030
gb|CN136543.1|CN136543 OX1_43_G11.g1_A002 Oxidatively-stres... 82 5e-030
gb|BF586246.1|BF586246 FM1_27_E10.b1_A003 Floral-Induced Me... 86 1e-029
gb|CW164218.1|CW164218 104_572_11151871_116_36465_030 Sorgh... 118 2e-029
gb|BM323743.1|BM323743 PIC1_22_G06.b1_A002 Pathogen-infecte... 79 3e-029
gb|BM323664.1|BM323664 PIC1_21_H06.b1_A002 Pathogen-infecte... 75 7e-029
gb|BG556907.1|BG556907 EM1_40_B08.b1_A002 Embryo 1 (EM1) So... 123 3e-028
gb|BE361500.1|BE361500 DG1_81_B12.b1_A002 Dark Grown 1 (DG1... 115 4e-027
gb|CW224101.1|CW224101 104_660_11203270_116_37444_091 Sorgh... 75 5e-027
gb|U33817.1|SBU33817 Sorghum bicolor dhurrinase mRNA, nucle... 75 5e-027
gb|CW053338.1|CW053338 104_293_10515908_114_30185 Sorghum m... 100 3e-026
gb|CW053211.1|CW053211 104_293_10515837_114_30184 Sorghum m... 100 3e-026
gb|CW117040.1|CW117040 104_493_11107445_148_34610_031 Sorgh... 65 5e-026
gb|CN148000.1|CN148000 WOUND1_53_C12.g1_A002 Wounded leaves... 80 9e-026
gb|CW339174.1|CW339174 104_839_11485133_116_36134_019 Sorgh... 67 5e-025
gb|CW188764.1|CW188764 104_608_11173219_116_36729_068 Sorgh... 114 1e-024
gb|CL189648.1|CL189648 104_407_10905518_114_32476_061 Sorgh... 63 2e-024
gb|CW299015.1|CW299015 104_781_11462882_148_35655_001 Sorgh... 79 5e-024
gb|BE595092.1|BE595092 PI1_45_E09.b1_A002 Pathogen induced ... 111 7e-024
gb|AW923117.1|AW923117 DG1_49_C11.b1_A002 Dark Grown 1 (DG1... 86 7e-024
gb|CN147980.1|CN147980 WOUND1_53_A07.g1_A002 Wounded leaves... 79 1e-023
gb|CL167735.1|CL167735 104_364_10810290_114_31802_354 Sorgh... 111 1e-023
gb|CW426316.1|CW426316 fsbb001f137k07f0 Sorghum methylation... 111 1e-023
gb|CN148142.1|CN148142 WOUND1_54_A06.g1_A002 Wounded leaves... 70 3e-023
gb|CD229624.1|CD229624 CCC1_17_E12.g1_A007 Callus culture/c... 70 3e-023
gb|BE595073.1|BE595073 PI1_45_C11.b1_A002 Pathogen induced ... 105 3e-023
gb|CW159823.1|CW159823 104_566_11149558_148_36423_093 Sorgh... 84 1e-022
gb|CW183756.1|CW183756 104_599_11164783_148_36676_020 Sorgh... 68 2e-022
gb|CX612987.1|CX612987 GABR1_5_C11.g1_A002 GA- or brassinol... 83 2e-022
gb|CN143487.1|CN143487 WOUND1_16_C08.g1_A002 Wounded leaves... 105 6e-022
gb|CL156686.1|CL156686 104_343_10783033_116_31476_361 Sorgh... 64 5e-021
gb|BE361086.1|BE361086 DG1_69_H05.b1_A002 Dark Grown 1 (DG1... 84 5e-021
gb|CL156685.1|CL156685 104_343_10783033_114_31475_361 Sorgh... 61 5e-021
gb|CW400817.1|CW400817 fsbb001f091f04f0 Sorghum methylation... 67 7e-021
gb|BZ366932.1|BZ366932 id01c08.b1 WGS-SbicolorF (JM107 adap... 95 7e-021
>gb|CL167736.1|CL167736 104_364_10810290_116_31803_354 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10810290, DNA
sequence
Length = 757
Score = 165 bits (354), Expect(2) = 2e-059
Identities = 64/85 (75%), Positives = 65/85 (76%)
Frame = +2 / +1
Query: 86 EAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCSGCPAGGNSTTEPYX 265
EAFADYAEFCF FGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS C AGGNSTTEPY
Sbjct: 70 EAFADYAEFCFQTFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCSECAAGGNSTTEPYL 249
Query: 266 XXXXXXXXXXXXXRRYRDKYQLHQK 340
RRYRDKYQ+ K
Sbjct: 250 AAHHLILSHAAAVRRYRDKYQVKCK 324
Score = 164 bits (353), Expect(2) = 6e-061
Identities = 72/84 (85%), Positives = 76/84 (90%)
Frame = -1 / -2
Query: 328 LILVAVSPGRSCMRKDEMVCDKVRFRGGVASGGAPGTPSRCVQAIVVAQSSDAPRLVEGK 149
LILVAVSP RSCMRKDEMVC KVR R GVASG A GTPSRCV AIVVA+SSDAPRLVEGK
Sbjct: 312 LILVAVSPHRSCMRKDEMVCSKVRLRRGVASGSALGTPSRCV*AIVVAKSSDAPRLVEGK 133
Query: 148 PVLHPVSERVEAELGVVCKRLHNL 77
PVLHPVSER+EAELGVVCKRL ++
Sbjct: 132 PVLHPVSERLEAELGVVCKRLPSI 61
Score = 159 bits (341), Expect(2) = 5e-058
Identities = 65/72 (90%), Positives = 65/72 (90%)
Frame = -2 / -3
Query: 288 ERMRWCATRYGSVVELPPAGHPEHLPGACKPLS*PRAATHLGSLKVNQFFTLSPNAWKQN 109
ERMRWCA RYGSVVELPPA H EHLPGACKPLS*PRAATHLGSLKVNQFFTLSPN WKQN
Sbjct: 272 ERMRWCAARYGSVVELPPAAHSEHLPGACKPLS*PRAATHLGSLKVNQFFTLSPNVWKQN 93
Query: 108 SA*SANASTIFG 73
SA*SANAS G
Sbjct: 92 SA*SANASLQLG 57
Score = 155 bits (332), Expect(2) = 4e-056
Identities = 71/80 (88%), Positives = 72/80 (90%)
Frame = +3 / +2
Query: 87 RRLQTTPSSASTRSETG*RTGLPSTSRGASLLWATTMACTHREGVPGAPPEATPPRNRTL 266
RRLQTTPSSAS RSETG*RTGLPSTSRGASLL ATTMA THREGVP A PEATP R+RTL
Sbjct: 71 RRLQTTPSSASRRSETG*RTGLPSTSRGASLLLATTMAYTHREGVPSALPEATPRRSRTL 250
Query: 267 SHTISSFLMQLRPGDTATSI 326
HTISSFLMQLR GDTATSI
Sbjct: 251 LHTISSFLMQLR*GDTATSI 310
Score = 140 bits (301), Expect(2) = 9e-048
Identities = 57/65 (87%), Positives = 58/65 (89%)
Frame = +1 / +3
Query: 133 QGEELVYLQRAEVRRCSGLRQWLARTGKVFRVPRRRQLHHGTVPCRTPSHPFSCSCGQAI 312
QGEELVYLQRAEVRRCS LRQWL RTGKVFRV RRQLH G VPC TPSHPFSCSCG+AI
Sbjct: 117 QGEELVYLQRAEVRRCSWLRQWLTRTGKVFRVRCRRQLHDGAVPCCTPSHPFSCSCGEAI 296
Query: 313 PRQVS 327
PRQVS
Sbjct: 297 PRQVS 311
Score = 116 bits (249), Expect(2) = 3e-045
Identities = 50/81 (61%), Positives = 52/81 (64%)
Frame = -3 / -1
Query: 326 DTCRGIAWPQLHEKG*DGVRQGTVPWWSCLRRGTRNTFPVRASHCRSPEQXXXXXXXXXX 147
DTCRGIA PQLHEKG*DGV+QGT P WSCLR+ TRNTFPVR SHCRS EQ
Sbjct: 310 DTCRGIASPQLHEKG*DGVQQGTAPSWSCLRQRTRNTFPVRVSHCRSQEQRRTSAR*R*T 131
Query: 146 XXSPCXXXXXXXXXXXLQTPP 84
SPC LQTPP
Sbjct: 130 SSSPCLRTSGSRTRRSLQTPP 68
Score = 92.7 bits (196), Expect(2) = 6e-061
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = -2 / -2
Query: 444 QPRWKSLARCAAAWSALLSLKGSYHTKSRRIPIFPFW 334
QPRWKSLARCAAAWSALLSLKGSYHTKS+RIPI PFW
Sbjct: 573 QPRWKSLARCAAAWSALLSLKGSYHTKSKRIPILPFW 463
Score = 88.6 bits (187), Expect(2) = 5e-058
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = -3 / -3
Query: 446 TSLGGSPWLAVLQPGPHCCR*KVRTTRNPGEFQSSPSGEA 327
TSLGGSPWLAVLQPG HCCR*KV TTRNP EFQSSP G+A
Sbjct: 575 TSLGGSPWLAVLQPGQHCCR*KVHTTRNPREFQSSPFGKA 456
Score = 88.1 bits (186), Expect(2) = 3e-045
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = -1 / -1
Query: 445 PA*VEVPGSLCCSLVRIAVAERFVPHEIQENSNLPLLVKLIL 320
PA*VEVPGSLCCSLV IAVAERF+PHEIQENSN PLLVKL +
Sbjct: 574 PA*VEVPGSLCCSLVSIAVAERFIPHEIQENSNPPLLVKLFV 449
Score = 87.2 bits (184), Expect(2) = 2e-059
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +1 / +1
Query: 325 SASPEGEDWNSPGFRVVRTFQRQQCGPGCSTASQGLPPRLV 447
+A P+GEDWNS GFRVV TFQRQQC PGCSTASQGLPPRLV
Sbjct: 454 TALPKGEDWNSLGFRVV*TFQRQQC*PGCSTASQGLPPRLV 576
Score = 86.3 bits (182), Expect(2) = 4e-056
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +3 / +3
Query: 327 SFTRRGRLEFSWISCGTNLSATAMRTRLQHSEPGTST*AG 446
SFT+RG LEFSWISCG NLSATAM TRLQHSEPGTST*AG
Sbjct: 456 SFTKRGGLEFSWISCGMNLSATAMLTRLQHSEPGTST*AG 575
Score = 72.5 bits (152), Expect(2) = 9e-048
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +2 / +2
Query: 326 QLHQKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGW 445
QL+QKG+IGILLDFVWYEPFSDSN FHLGW
Sbjct: 455 QLYQKGRIGILLDFVWYEPFSDSNADQAAAQRARDFHLGW 574
>gb|BF587276.1|BF587276 FM1_34_D09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 503
Score = 203 bits (438), Expect(2) = 9e-054
Identities = 76/133 (57%), Positives = 88/133 (66%)
Frame = +2 / +1
Query: 62 GWLSPKIVEAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCSGCPAGG 241
GWL PKIV FADYA+FCF FGDRVKNWFT NEPR V+ LGYD G+ P RC+ C AGG
Sbjct: 103 GWLGPKIVNIFADYADFCFKTFGDRVKNWFTLNEPRIVSFLGYDKGIDPPNRCTQCTAGG 282
Query: 242 NSTTEPYXXXXXXXXXXXXXXRRYRDKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXXX 421
NS+TEPY RYR+KYQ QKGK+GI+LDF WYEP ++S
Sbjct: 283 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPLTNSTEDQAAAQR 462
Query: 422 XXXFHLGWFLDPI 460
FH+GWFLDP+
Sbjct: 463 ARDFHIGWFLDPL 501
Score = 82.2 bits (173), Expect(2) = 1e-027
Identities = 41/66 (62%), Positives = 42/66 (63%)
Frame = -2 / -1
Query: 258 GSVVELPPAGHPEHLPGACKPLS*PRAATHLGSLKVNQFFTLSPNAWKQNSA*SANASTI 79
GSV E PPA H H G PLS*PR T LGS VNQF T SP KQ SA*SAN TI
Sbjct: 299 GSVDEFPPAVHCVHRLGGSIPLS*PRNDTILGSFNVNQFLTRSPKVLKQKSA*SANMFTI 120
Query: 78 FGLSQP 61
FG +QP
Sbjct: 119 FGPNQP 102
Score = 62.0 bits (129), Expect(2) = 1e-027
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = -2 / -1
Query: 456 GSRNQPRWKSLARCAAAWSALLSLKGSYHTKSRRIPIFPF 337
GSRNQP WKSLA CAAA S++ ++GSY KSR IP PF
Sbjct: 497 GSRNQPIWKSLALCAAA*SSVELVRGSYQLKSRTIPTLPF 378
Score = 28.1 bits (55), Expect(2) = 9e-054
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3 / +1
Query: 15 NLYHYDLPLALHEQTWAGLAQRL 83
NL HYDLPLAL ++ L ++
Sbjct: 55 NLNHYDLPLALQKKYQGWLGPKI 123
>gb|CW267997.1|CW267997 104_738_11401044_148_35300_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401044, DNA
sequence
Length = 659
Score = 92.7 bits (196), Expect(3) = 2e-050
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = +2 / -3
Query: 446 FLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVG 568
FLDPI++GRYPYSMQEI KDRLPLFSDEE+RM KGSIDYVG
Sbjct: 123 FLDPIINGRYPYSMQEIVKDRLPLFSDEESRMVKGSIDYVG 1
Score = 92.7 bits (196), Expect(3) = 3e-049
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = -2 / +1
Query: 444 QPRWKSLARCAAAWSALLSLKGSYHTKSRRIPIFPFW 334
QPRWKSLARCAAAWSALLSLKGSYHTKS+RIPI PFW
Sbjct: 319 QPRWKSLARCAAAWSALLSLKGSYHTKSKRIPILPFW 429
Score = 88.6 bits (187), Expect(3) = 2e-036
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = -3 / +2
Query: 446 TSLGGSPWLAVLQPGPHCCR*KVRTTRNPGEFQSSPSGEA 327
TSLGGSPWLAVLQPG HCCR*KV TTRNP EFQSSP G+A
Sbjct: 317 TSLGGSPWLAVLQPGQHCCR*KVHTTRNPREFQSSPFGKA 436
Score = 88.1 bits (186), Expect(3) = 6e-029
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = -1 / +3
Query: 445 PA*VEVPGSLCCSLVRIAVAERFVPHEIQENSNLPLLVKLIL 320
PA*VEVPGSLCCSLV IAVAERF+PHEIQENSN PLLVKL +
Sbjct: 318 PA*VEVPGSLCCSLVSIAVAERFIPHEIQENSNPPLLVKLFV 443
Score = 87.7 bits (185), Expect(3) = 3e-049
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = -1 / +1
Query: 568 ANIVYRAFRHPGFFIAEQR*PVFGNLLHRVRVPSMYNGVKEP 443
AN+VYRAF HPGFFI EQR P+F NLLHRVR+PS+Y G+KEP
Sbjct: 1 ANVVYRAFHHPGFFITEQRQPIFNNLLHRVRIPSIYYGIKEP 126
Score = 87.2 bits (184), Expect(3) = 2e-050
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +1 / -3
Query: 325 SASPEGEDWNSPGFRVVRTFQRQQCGPGCSTASQGLPPRLV 447
+A P+GEDWNS GFRVV TFQRQQC PGCSTASQGLPPRLV
Sbjct: 438 TALPKGEDWNSLGFRVV*TFQRQQC*PGCSTASQGLPPRLV 316
Score = 86.3 bits (182), Expect(3) = 2e-039
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +3 / -2
Query: 327 SFTRRGRLEFSWISCGTNLSATAMRTRLQHSEPGTST*AG 446
SFT+RG LEFSWISCG NLSATAM TRLQHSEPGTST*AG
Sbjct: 436 SFTKRGGLEFSWISCGMNLSATAMLTRLQHSEPGTST*AG 317
Score = 72.5 bits (152), Expect(3) = 1e-027
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +2 / -1
Query: 326 QLHQKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGW 445
QL+QKG+IGILLDFVWYEPFSDSN FHLGW
Sbjct: 437 QLYQKGRIGILLDFVWYEPFSDSNADQAAAQRARDFHLGW 318
Score = 67.5 bits (141), Expect(3) = 2e-039
Identities = 31/41 (75%), Positives = 31/41 (75%)
Frame = +1 / -2
Query: 445 VP*PHCTWTVPVLDARDCQRQATVVQR*RSQDGERLYRLCW 567
VP* H WTV VLDARDC R A VVQ *R QDGERLYRL W
Sbjct: 124 VP*SHNKWTVSVLDARDC*R*AAVVQ**RIQDGERLYRLRW 2
Score = 61.1 bits (127), Expect(3) = 2e-050
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +1 / -2
Query: 253 GTVPCRTPSHPFSCSCGQAIPRQVS 327
G VPC TPSHPFSCSCG+AIPRQVS
Sbjct: 655 GAVPCCTPSHPFSCSCGEAIPRQVS 581
Score = 59.7 bits (124), Expect(3) = 1e-027
Identities = 25/35 (71%), Positives = 25/35 (71%)
Frame = +3 / -1
Query: 444 GSLTPLYMDGTRTRCKRLPKTGYRCSAMKKPGWRK 548
GSL P MDG RTRCKRL K G RCS MK PGW K
Sbjct: 125 GSLIP**MDGIRTRCKRLLKIGCRCSVMKNPGW*K 21
Score = 56.5 bits (117), Expect(3) = 3e-049
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = -3 / +3
Query: 326 DTCRGIAWPQLHEKG*DGVRQGTVP 252
DTCRGIA PQLHEKG*DGV+QGT P
Sbjct: 582 DTCRGIASPQLHEKG*DGVQQGTAP 656
Score = 55.1 bits (114), Expect(3) = 2e-036
Identities = 23/26 (88%), Positives = 23/26 (88%)
Frame = -1 / +1
Query: 328 LILVAVSPGRSCMRKDEMVCDKVRFR 251
LILVAVSP RSCMRKDEMVC KVR R
Sbjct: 580 LILVAVSPHRSCMRKDEMVCSKVRLR 657
Score = 49.6 bits (102), Expect(3) = 2e-039
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +3 / -1
Query: 252 RNRTLSHTISSFLMQLRPGDTATSI 326
R+RTL HTISSFLMQLR GDTATSI
Sbjct: 656 RSRTLLHTISSFLMQLR*GDTATSI 582
Score = 49.6 bits (102), Expect(3) = 2e-036
Identities = 22/41 (53%), Positives = 22/41 (53%)
Frame = -2 / +2
Query: 567 PT*SIEPFXXXXXXXXXXXXXXXXXSCIEYGYRPCTMGSRN 445
PT*SIEPF SCIEYGYRP MGSRN
Sbjct: 2 PT*SIEPFTILDSSSLNNGSLSLTISCIEYGYRPFIMGSRN 124
Score = 45.1 bits (92), Expect(3) = 6e-029
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = -3 / +3
Query: 527 HR*TTVACLWQSLASSTGTVHVQWGQGT 444
H *TT A L QSLASST TVH+ W QGT
Sbjct: 42 HH*TTAAYL*QSLASSTDTVHLLWDQGT 125
Score = 35.0 bits (70), Expect(3) = 6e-029
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -2 / +2
Query: 288 ERMRWCATRYGSV 250
ERMRWCA RYGSV
Sbjct: 620 ERMRWCAARYGSV 658
Score = 31.8 bits (63), Expect(3) = 1e-027
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +2 / -3
Query: 251 TEPYXXXXXXXXXXXXXXRRYRDKYQLHQK 340
TEPY RRYRDKYQ+ K
Sbjct: 657 TEPYLAAHHLILSHAAAVRRYRDKYQVKCK 568
>gb|CF487437.1|CF487437 POL1_43_F12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_F12_A002 5', mRNA sequence
Length = 754
Score = 136 bits (292), Expect(3) = 3e-049
Identities = 53/116 (45%), Positives = 71/116 (61%)
Frame = +2 / +1
Query: 242 NSTTEPYXXXXXXXXXXXXXXRRYRDKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXXX 421
+++ EPY + YR+KY++HQ GKIGILLDFVWYEP + S
Sbjct: 160 STSPEPYIAGHHLLLSHAAAVKLYREKYKVHQGGKIGILLDFVWYEPLTKSIEDEFAAHR 339
Query: 422 XXXFHLGWFLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVGINHYTSF 589
F LGWFL PI +G YP +M++I RLP F+ E++ M KGS DY+ INHYT++
Sbjct: 340 ARMFTLGWFLHPITYGHYPETMEKIVMGRLPNFTFEQSAMVKGSADYIAINHYTTY 507
Score = 70.3 bits (147), Expect(3) = 3e-049
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2 / +3
Query: 62 GWLSPKIVEAFADYAEFCFHAFGDRVKNWFTFNEPRCV 175
GWLSP+IV F +A+FCF +GDRVK WFT NEPR V
Sbjct: 66 GWLSPRIVPDFTAFADFCFKTYGDRVKFWFTINEPRAV 179
Score = 28.1 bits (55), Expect(3) = 3e-049
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3 / +3
Query: 18 LYHYDLPLALHEQTWAGLAQRL 83
LYHYDLP L +Q L+ R+
Sbjct: 21 LYHYDLPQVLQDQYNGWLSPRI 86
>gb|CW426317.1|CW426317 fsbb001f137k07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f137k07, DNA
sequence
Length = 497
Score = 165 bits (354), Expect(3) = 2e-047
Identities = 64/85 (75%), Positives = 65/85 (76%)
Frame = +2 / +3
Query: 86 EAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCSGCPAGGNSTTEPYX 265
EAFADYAEFCF FGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS C AGGNSTTEPY
Sbjct: 165 EAFADYAEFCFQTFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCSECAAGGNSTTEPYL 344
Query: 266 XXXXXXXXXXXXXRRYRDKYQLHQK 340
RRYRDKYQ+ K
Sbjct: 345 AAHHLILSHAAAVRRYRDKYQVKCK 419
Score = 164 bits (353), Expect(3) = 2e-048
Identities = 72/84 (85%), Positives = 76/84 (90%)
Frame = -1 / -1
Query: 328 LILVAVSPGRSCMRKDEMVCDKVRFRGGVASGGAPGTPSRCVQAIVVAQSSDAPRLVEGK 149
LILVAVSP RSCMRKDEMVC KVR R GVASG A GTPSRCV AIVVA+SSDAPRLVEGK
Sbjct: 407 LILVAVSPHRSCMRKDEMVCSKVRLRRGVASGSALGTPSRCV*AIVVAKSSDAPRLVEGK 228
Query: 148 PVLHPVSERVEAELGVVCKRLHNL 77
PVLHPVSER+EAELGVVCKRL ++
Sbjct: 227 PVLHPVSERLEAELGVVCKRLPSI 156
Score = 159 bits (341), Expect(3) = 1e-044
Identities = 65/72 (90%), Positives = 65/72 (90%)
Frame = -2 / -2
Query: 288 ERMRWCATRYGSVVELPPAGHPEHLPGACKPLS*PRAATHLGSLKVNQFFTLSPNAWKQN 109
ERMRWCA RYGSVVELPPA H EHLPGACKPLS*PRAATHLGSLKVNQFFTLSPN WKQN
Sbjct: 367 ERMRWCAARYGSVVELPPAAHSEHLPGACKPLS*PRAATHLGSLKVNQFFTLSPNVWKQN 188
Query: 108 SA*SANASTIFG 73
SA*SANAS G
Sbjct: 187 SA*SANASLQLG 152
Score = 155 bits (332), Expect(3) = 1e-043
Identities = 71/80 (88%), Positives = 72/80 (90%)
Frame = +3 / +1
Query: 87 RRLQTTPSSASTRSETG*RTGLPSTSRGASLLWATTMACTHREGVPGAPPEATPPRNRTL 266
RRLQTTPSSAS RSETG*RTGLPSTSRGASLL ATTMA THREGVP A PEATP R+RTL
Sbjct: 166 RRLQTTPSSASRRSETG*RTGLPSTSRGASLLLATTMAYTHREGVPSALPEATPRRSRTL 345
Query: 267 SHTISSFLMQLRPGDTATSI 326
HTISSFLMQLR GDTATSI
Sbjct: 346 LHTISSFLMQLR*GDTATSI 405
Score = 140 bits (301), Expect(2) = 6e-033
Identities = 57/65 (87%), Positives = 58/65 (89%)
Frame = +1 / +2
Query: 133 QGEELVYLQRAEVRRCSGLRQWLARTGKVFRVPRRRQLHHGTVPCRTPSHPFSCSCGQAI 312
QGEELVYLQRAEVRRCS LRQWL RTGKVFRV RRQLH G VPC TPSHPFSCSCG+AI
Sbjct: 212 QGEELVYLQRAEVRRCSWLRQWLTRTGKVFRVRCRRQLHDGAVPCCTPSHPFSCSCGEAI 391
Query: 313 PRQVS 327
PRQVS
Sbjct: 392 PRQVS 406
Score = 116 bits (249), Expect(2) = 2e-029
Identities = 50/81 (61%), Positives = 52/81 (64%)
Frame = -3 / -3
Query: 326 DTCRGIAWPQLHEKG*DGVRQGTVPWWSCLRRGTRNTFPVRASHCRSPEQXXXXXXXXXX 147
DTCRGIA PQLHEKG*DGV+QGT P WSCLR+ TRNTFPVR SHCRS EQ
Sbjct: 405 DTCRGIASPQLHEKG*DGVQQGTAPSWSCLRQRTRNTFPVRVSHCRSQEQRRTSAR*R*T 226
Query: 146 XXSPCXXXXXXXXXXXLQTPP 84
SPC LQTPP
Sbjct: 225 SSSPCLRTSGSRTRRSLQTPP 163
Score = 36.8 bits (74), Expect(3) = 2e-047
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1 / +2
Query: 19 STIMTSHWHSMNR 57
STIMTSHWHSMNR
Sbjct: 2 STIMTSHWHSMNR 40
Score = 36.3 bits (73), Expect(3) = 1e-043
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3 / +1
Query: 18 LYHYDLPLALHEQ 56
LYHYDLPLALHEQ
Sbjct: 1 LYHYDLPLALHEQ 39
Score = 35.9 bits (72), Expect(3) = 2e-048
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3 / -3
Query: 56 LFMECQWEVIMVE 18
LFMECQWEVIMVE
Sbjct: 39 LFMECQWEVIMVE 1
Score = 35.4 bits (71), Expect(3) = 1e-044
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2 / -2
Query: 54 VHGVPMGGHNGR 19
VHGVPMGGHNGR
Sbjct: 37 VHGVPMGGHNGR 2
Score = 33.1 bits (66), Expect(2) = 2e-029
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 55 CSWSANGRS*W* 20
CSWSANGRS*W*
Sbjct: 38 CSWSANGRS*W* 3
Score = 31.3 bits (62), Expect(3) = 2e-048
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1 / -2
Query: 94 KRLHNLWAKPAQV 56
K +HNLWAKPAQV
Sbjct: 79 KFIHNLWAKPAQV 41
Score = 26.7 bits (52), Expect(3) = 2e-047
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / +2
Query: 59 LGWLSPKIVEAF 94
LGWLSPKIV F
Sbjct: 44 LGWLSPKIVYEF 79
Score = 24.9 bits (48), Expect(3) = 1e-044
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 93 NASTIFGLSQPR 58
N+ TIFGLSQP+
Sbjct: 78 NSYTIFGLSQPK 43
Score = 24.9 bits (48), Expect(3) = 1e-043
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / +3
Query: 57 TWAGLAQRL 83
TWAGLAQRL
Sbjct: 42 TWAGLAQRL 68
Score = 22.1 bits (42), Expect(2) = 6e-033
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / +1
Query: 61 GLA*PKDC 84
GLA*PKDC
Sbjct: 46 GLA*PKDC 69
>gb|BM324257.1|BM324257 PIC1_26_B11.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 487
Score = 172 bits (371), Expect(2) = 2e-044
Identities = 65/111 (58%), Positives = 77/111 (69%)
Frame = +2 / +1
Query: 62 GWLSPKIVEAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCSGCPAGG 241
GWL+PK+ + F DYA+FCF +FGD VK+WFTFNEPR VA LGYD G P RC+ C AGG
Sbjct: 142 GWLNPKMAKLFTDYADFCFKSFGDHVKHWFTFNEPRIVALLGYDGGSIPPQRCTKCAAGG 321
Query: 242 NSTTEPYXXXXXXXXXXXXXXRRYRDKYQLHQKGKIGILLDFVWYEPFSDS 394
NS TEPY RYR+KYQ QKGK+GI+LDF WYEP ++S
Sbjct: 322 NSATEPYIVAHNFLLSHAAAVARYRNKYQAAQKGKVGIVLDFNWYEPLTNS 474
Score = 27.2 bits (53), Expect(2) = 2e-044
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 15 NLYHYDLPLALHEQ 56
NLYH DLPLAL +
Sbjct: 94 NLYHSDLPLALQNK 135
>gb|CW135560.1|CW135560 104_520_11117914_148_34833_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117914, DNA
sequence
Length = 663
Score = 111 bits (236), Expect(2) = 3e-043
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +2 / -2
Query: 446 FLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVGINHYTSF 589
FLDPI++GRYPYSMQEI KDRLPLFSDEE+RM KGSIDYVGINHYTSF
Sbjct: 323 FLDPIINGRYPYSMQEIVKDRLPLFSDEESRMVKGSIDYVGINHYTSF 180
Score = 100 bits (213), Expect(2) = 8e-042
Identities = 38/49 (77%), Positives = 44/49 (89%)
Frame = -1 / +3
Query: 589 KRSVVVDANIVYRAFRHPGFFIAEQR*PVFGNLLHRVRVPSMYNGVKEP 443
+RSVVVDAN+VYRAF HPGFFI EQR P+F NLLHRVR+PS+Y G+KEP
Sbjct: 180 ERSVVVDANVVYRAFHHPGFFITEQRQPIFNNLLHRVRIPSIYYGIKEP 326
Score = 92.7 bits (196), Expect(2) = 8e-042
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = -2 / +3
Query: 444 QPRWKSLARCAAAWSALLSLKGSYHTKSRRIPIFPFW 334
QPRWKSLARCAAAWSALLSLKGSYHTKS+RIPI PFW
Sbjct: 519 QPRWKSLARCAAAWSALLSLKGSYHTKSKRIPILPFW 629
Score = 88.6 bits (187), Expect(2) = 3e-030
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = -3 / +1
Query: 446 TSLGGSPWLAVLQPGPHCCR*KVRTTRNPGEFQSSPSGEA 327
TSLGGSPWLAVLQPG HCCR*KV TTRNP EFQSSP G+A
Sbjct: 517 TSLGGSPWLAVLQPGQHCCR*KVHTTRNPREFQSSPFGKA 636
Score = 88.1 bits (186), Expect(2) = 3e-028
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = -1 / +2
Query: 445 PA*VEVPGSLCCSLVRIAVAERFVPHEIQENSNLPLLVKLIL 320
PA*VEVPGSLCCSLV IAVAERF+PHEIQENSN PLLVKL +
Sbjct: 518 PA*VEVPGSLCCSLVSIAVAERFIPHEIQENSNPPLLVKLFV 643
Score = 87.7 bits (185), Expect(2) = 4e-036
Identities = 38/48 (79%), Positives = 38/48 (79%)
Frame = +1 / -1
Query: 445 VP*PHCTWTVPVLDARDCQRQATVVQR*RSQDGERLYRLCWHQPLHFF 588
VP* H WTV VLDARDC R A VVQ *R QDGERLYRL WHQPLHFF
Sbjct: 324 VP*SHNKWTVSVLDARDC*R*AAVVQ**RIQDGERLYRLRWHQPLHFF 181
Score = 87.2 bits (184), Expect(2) = 3e-043
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +1 / -2
Query: 325 SASPEGEDWNSPGFRVVRTFQRQQCGPGCSTASQGLPPRLV 447
+A P+GEDWNS GFRVV TFQRQQC PGCSTASQGLPPRLV
Sbjct: 638 TALPKGEDWNSLGFRVV*TFQRQQC*PGCSTASQGLPPRLV 516
Score = 86.3 bits (182), Expect(2) = 4e-036
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +3 / -1
Query: 327 SFTRRGRLEFSWISCGTNLSATAMRTRLQHSEPGTST*AG 446
SFT+RG LEFSWISCG NLSATAM TRLQHSEPGTST*AG
Sbjct: 636 SFTKRGGLEFSWISCGMNLSATAMLTRLQHSEPGTST*AG 517
Score = 72.5 bits (152), Expect(2) = 1e-023
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +2 / -3
Query: 326 QLHQKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGW 445
QL+QKG+IGILLDFVWYEPFSDSN FHLGW
Sbjct: 637 QLYQKGRIGILLDFVWYEPFSDSNADQAAAQRARDFHLGW 518
Score = 65.7 bits (137), Expect(2) = 3e-030
Identities = 29/48 (60%), Positives = 29/48 (60%)
Frame = -2 / +1
Query: 588 KEV*WLMPT*SIEPFXXXXXXXXXXXXXXXXXSCIEYGYRPCTMGSRN 445
KEV*WLMPT*SIEPF SCIEYGYRP MGSRN
Sbjct: 181 KEV*WLMPT*SIEPFTILDSSSLNNGSLSLTISCIEYGYRPFIMGSRN 324
Score = 59.7 bits (124), Expect(2) = 1e-023
Identities = 25/35 (71%), Positives = 25/35 (71%)
Frame = +3 / -3
Query: 444 GSLTPLYMDGTRTRCKRLPKTGYRCSAMKKPGWRK 548
GSL P MDG RTRCKRL K G RCS MK PGW K
Sbjct: 325 GSLIP**MDGIRTRCKRLLKIGCRCSVMKNPGW*K 221
Score = 59.7 bits (124), Expect(2) = 3e-028
Identities = 29/48 (60%), Positives = 30/48 (62%)
Frame = -3 / +2
Query: 587 KKCSG*CQHXXXXXXXXXXLHR*TTVACLWQSLASSTGTVHVQWGQGT 444
KKCSG*CQ LH *TT A L QSLASST TVH+ W QGT
Sbjct: 182 KKCSG*CQRSL*SLSPSWILHH*TTAAYL*QSLASSTDTVHLLWDQGT 325
>gb|AW671741.1|AW671741 LG1_351_F12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 663
Score = 102 bits (217), Expect(2) = 3e-039
Identities = 39/114 (34%), Positives = 56/114 (49%)
Frame = +2 / +3
Query: 239 GNSTTEPYXXXXXXXXXXXXXXRRYRDKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXX 418
GNS+TEPY Y+ Y+ Q G +GI + WYEP +
Sbjct: 255 GNSSTEPYIAAHNMILAHAKTVNIYKKNYKTKQGGSVGITVYMRWYEPLRNITDDHLAVS 434
Query: 419 XXXXFHLGWFLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVGINHY 580
F WFLDP+ G YP+ M++I LP F++ E ++ K ID++G+NHY
Sbjct: 435 RAQSFEAPWFLDPLFFGDYPHQMRQILGPNLPEFTEGEKQLMKNQIDFIGVNHY 596
Score = 80.8 bits (170), Expect(2) = 3e-039
Identities = 31/53 (58%), Positives = 35/53 (66%)
Frame = +2 / +3
Query: 65 WLSPKIVEAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
WLSP+I E F +AE CF FGDRVK+W TFNEP +A L Y NG P CS
Sbjct: 72 WLSPEIQEDFTYFAEICFKMFGDRVKHWATFNEPNLMAKLAYFNGKFPPSHCS 230
>gb|CN124070.1|CN124070 RHOH1_2_A09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_2_A09_A002 5', mRNA sequence
Length = 626
Score = 99.1 bits (210), Expect(2) = 4e-039
Identities = 38/94 (40%), Positives = 55/94 (58%)
Frame = +2 / +3
Query: 311 YRDKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGWFLDPIVHGRYPYSMQ 490
YR K++ Q G++G ++D W EPFS+ F LGW+LDPI G YP SM+
Sbjct: 282 YRRKFKAAQGGEVGFVVDCEWAEPFSEKAEDQIAAQRRIDFQLGWYLDPIYFGDYPESMR 461
Query: 491 EIAKDRLPLFSDEEARMAKGSIDYVGINHYTSFL 592
+ LP FS+++ + ID++G+NHYTS L
Sbjct: 462 QRLGSDLPTFSEKDKEFIRNKIDFIGLNHYTSRL 563
Score = 83.5 bits (176), Expect(2) = 4e-039
Identities = 34/55 (61%), Positives = 36/55 (65%)
Frame = +2 / +3
Query: 62 GWLSPKIVEAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCSG 226
GW+S KIVE FA YAE CF FGDRVK W T NEP A GY G+ APG C G
Sbjct: 51 GWISDKIVEYFALYAEACFANFGDRVKRWITINEPLQTAINGYGIGIFAPGGCQG 215
>gb|CW135559.1|CW135559 104_520_11117914_116_34837_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117914, DNA
sequence
Length = 639
Score = 122 bits (261), Expect(3) = 7e-036
Identities = 45/48 (93%), Positives = 45/48 (93%)
Frame = +2 / +2
Query: 86 EAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCSGC 229
EAFADYAEFCF FGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS C
Sbjct: 491 EAFADYAEFCFQTFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCSEC 634
Score = 114 bits (244), Expect(3) = 1e-036
Identities = 48/54 (88%), Positives = 48/54 (88%)
Frame = -2 / -1
Query: 234 AGHPEHLPGACKPLS*PRAATHLGSLKVNQFFTLSPNAWKQNSA*SANASTIFG 73
A H EHLPGACKPLS*PRAATHLGSLKVNQFFTLSPN WKQNSA*SANAS G
Sbjct: 639 AAHSEHLPGACKPLS*PRAATHLGSLKVNQFFTLSPNVWKQNSA*SANASLQLG 478
Score = 102 bits (217), Expect(3) = 5e-030
Identities = 44/51 (86%), Positives = 48/51 (94%)
Frame = -1 / -3
Query: 229 APGTPSRCVQAIVVAQSSDAPRLVEGKPVLHPVSERVEAELGVVCKRLHNL 77
A GTPSRCV AIVVA+SSDAPRLVEGKPVLHPVSER+EAELGVVCKRL ++
Sbjct: 634 ALGTPSRCV*AIVVAKSSDAPRLVEGKPVLHPVSERLEAELGVVCKRLPSI 482
Score = 97.7 bits (207), Expect(2) = 2e-026
Identities = 44/48 (91%), Positives = 44/48 (91%)
Frame = +3 / +3
Query: 87 RRLQTTPSSASTRSETG*RTGLPSTSRGASLLWATTMACTHREGVPGA 230
RRLQTTPSSAS RSETG*RTGLPSTSRGASLL ATTMA THREGVP A
Sbjct: 492 RRLQTTPSSASRRSETG*RTGLPSTSRGASLLLATTMAYTHREGVPSA 635
Score = 46.4 bits (95), Expect(3) = 1e-036
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -2 / -3
Query: 75 GLSQPRSVHGVPMGGHNGRDLST 7
G + P +VHGVPMGGHNGRDL T
Sbjct: 385 G*ASPSTVHGVPMGGHNGRDLHT 317
Score = 42.8 bits (87), Expect(3) = 5e-030
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / -1
Query: 56 LFMECQWEVIMVEICRR 6
LFMECQWEVIMVEIC R
Sbjct: 366 LFMECQWEVIMVEICIR 316
Score = 42.3 bits (86), Expect(2) = 2e-026
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +3 / +1
Query: 15 NLYHYDLPLALHEQTWAGLAQRLWRRLQT 101
NLYHYDLPLALHEQ L+ ++ QT
Sbjct: 325 NLYHYDLPLALHEQYLGWLSPKIVYEFQT 411
Score = 40.5 bits (82), Expect(3) = 7e-036
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / +2
Query: 7 RRQISTIMTSHWHSMN 54
R QISTIMTSHWHSMN
Sbjct: 317 RMQISTIMTSHWHSMN 364
Score = 31.3 bits (62), Expect(3) = 1e-036
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1 / -1
Query: 94 KRLHNLWAKPAQV 56
K +HNLWAKPAQV
Sbjct: 405 KFIHNLWAKPAQV 367
Score = 26.7 bits (52), Expect(3) = 7e-036
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / +1
Query: 59 LGWLSPKIVEAF 94
LGWLSPKIV F
Sbjct: 370 LGWLSPKIVYEF 405
Score = 24.9 bits (48), Expect(3) = 5e-030
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 93 NASTIFGLSQPR 58
N+ TIFGLSQP+
Sbjct: 404 NSYTIFGLSQPK 369
>gb|CW398117.1|CW398117 fsbb001f087g20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f087g20, DNA
sequence
Length = 748
Score = 84.0 bits (177), Expect(4) = 2e-036
Identities = 32/44 (72%), Positives = 34/44 (77%)
Frame = +2 / -3
Query: 92 FADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
FA+YAE CF AFGDRVK+W T NEP VA GYD GL APGRCS
Sbjct: 737 FAEYAETCFKAFGDRVKHWITLNEPHTVAIQGYDAGLQAPGRCS 606
Score = 64.8 bits (135), Expect(4) = 2e-036
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +2 / -1
Query: 446 FLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVGINHYTSF 589
F DP G YP M+ DRLP F+ +EA + KG++D+VGINHYT++
Sbjct: 160 FADPFFFGDYPALMRSRVGDRLPKFTADEAALVKGALDFVGINHYTTY 17
Score = 38.2 bits (77), Expect(4) = 2e-036
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2 / -1
Query: 335 QKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGW 445
Q G++GI D +W+EP +++ F LGW
Sbjct: 367 QNGELGIAFDVMWFEPMTNTTADIEAAKRGQEFQLGW 257
Score = 22.6 bits (43), Expect(4) = 2e-036
Identities = 10/31 (32%), Positives = 12/31 (38%)
Frame = +2 / -3
Query: 239 GNSTTEPYXXXXXXXXXXXXXXRRYRDKYQL 331
GNS TEPY YR Y++
Sbjct: 578 GNSGTEPYIVAHNFILAHATVSDIYRRNYKV 486
>gb|BG050964.1|BG050964 FM1_54_E04.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 447
Score = 147 bits (315), Expect = 2e-034
Identities = 55/115 (47%), Positives = 72/115 (62%)
Frame = +2 / +3
Query: 242 NSTTEPYXXXXXXXXXXXXXXRRYRDKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXXX 421
NS TEPY RYR KYQ QKGK+GI+LDF WYE ++S
Sbjct: 3 NSATEPYIVAHNFLLAHAAAVARYRTKYQAAQKGKVGIVLDFNWYEALTNSPDDQAAAQR 182
Query: 422 XXXFHLGWFLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVGINHYTS 586
FH+GWF+DP+++G YP MQ++ K+RLP F+ E+A++ KGS DY+GIN YTS
Sbjct: 183 ARDFHIGWFVDPLINGHYPQIMQDLVKERLPRFTPEQAKLVKGSADYIGINEYTS 347
>gb|AF253508.1|AF253508 Sorghum bicolor cyanogenic beta-glucosidase dhurrinase-2 mRNA,
complete cds
Length = 1935
Score = 86.3 bits (182), Expect(2) = 4e-034
Identities = 32/90 (35%), Positives = 56/90 (62%)
Frame = +2 / +2
Query: 317 DKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGWFLDPIVHGRYPYSMQEI 496
+K+ +KG+IG+ L+ + P+ + ++LGW+L+P+V G YP+SM+
Sbjct: 926 NKFHRGEKGRIGLALNVMGTVPYGSTFLDEQAHERCMDYNLGWYLEPVVRGDYPHSMRSS 1105
Query: 497 AKDRLPLFSDEEARMAKGSIDYVGINHYTS 586
+DRLP F+++E + GS D +GIN+Y+S
Sbjct: 1106 VRDRLPHFTEKEQQKLVGSYDMIGINYYSS 1195
Score = 79.4 bits (167), Expect(2) = 4e-034
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = +2 / +2
Query: 62 GWLSPKIVEAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
G+L +I++ + D+A CF FGDRV NW TFNEP L Y G+ APGRCS
Sbjct: 662 GFLDKRIIKDYTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCS 823
>gb|CN145790.1|CN145790 WOUND1_35_F12.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_35_F12_A002 3', mRNA sequence
Length = 825
Score = 86.3 bits (182), Expect(2) = 4e-034
Identities = 32/90 (35%), Positives = 56/90 (62%)
Frame = +2 / +1
Query: 317 DKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGWFLDPIVHGRYPYSMQEI 496
+K+ +KG+IG+ L+ + P+ + ++LGW+L+P+V G YP+SM+
Sbjct: 364 NKFHRGEKGRIGLALNVMGTVPYGSTFLDEQAHERCMDYNLGWYLEPVVRGDYPHSMRSS 543
Query: 497 AKDRLPLFSDEEARMAKGSIDYVGINHYTS 586
+DRLP F+++E + GS D +GIN+Y+S
Sbjct: 544 VRDRLPHFTEKEQQKLVGSYDMIGINYYSS 633
Score = 79.4 bits (167), Expect(2) = 4e-034
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = +2 / +1
Query: 62 GWLSPKIVEAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
G+L +I++ + D+A CF FGDRV NW TFNEP L Y G+ APGRCS
Sbjct: 100 GFLDKRIIKDYTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCS 261
>gb|CN148176.1|CN148176 WOUND1_54_D09.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_54_D09_A002 5', mRNA sequence
Length = 826
Score = 86.3 bits (182), Expect(2) = 4e-034
Identities = 32/90 (35%), Positives = 56/90 (62%)
Frame = +2 / +3
Query: 317 DKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGWFLDPIVHGRYPYSMQEI 496
+K+ +KG+IG+ L+ + P+ + ++LGW+L+P+V G YP+SM+
Sbjct: 387 NKFHRGEKGRIGLALNVMGTVPYGSTFLDEQAHERCMDYNLGWYLEPVVRGDYPHSMRSS 566
Query: 497 AKDRLPLFSDEEARMAKGSIDYVGINHYTS 586
+DRLP F+++E + GS D +GIN+Y+S
Sbjct: 567 VRDRLPHFTEKEQQKLVGSYDMIGINYYSS 656
Score = 79.4 bits (167), Expect(2) = 4e-034
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = +2 / +3
Query: 62 GWLSPKIVEAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
G+L +I++ + D+A CF FGDRV NW TFNEP L Y G+ APGRCS
Sbjct: 123 GFLDKRIIKDYTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCS 284
>gb|CW339175.1|CW339175 104_839_11485133_148_36135_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485133, DNA
sequence
Length = 691
Score = 77.6 bits (163), Expect(3) = 2e-033
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +2 / -1
Query: 431 FHLGWFLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVGINHYTS 586
F GWFLDPIVHG YP +M DRLP F+ +A++ KGS D++G+N+YT+
Sbjct: 157 FMYGWFLDPIVHGEYPGTMLGYLGDRLPRFTAAQAKLIKGSYDFIGVNYYTA 2
Score = 66.6 bits (139), Expect(3) = 2e-033
Identities = 26/44 (59%), Positives = 29/44 (65%)
Frame = +2 / -1
Query: 92 FADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
+ D+AE CF FGDRVK W TFNEP + GY G APGRCS
Sbjct: 511 YVDFAEVCFKEFGDRVKAWTTFNEPWTYSYQGYAVGKSAPGRCS 380
Score = 37.3 bits (75), Expect(3) = 2e-033
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2 / -1
Query: 239 GNSTTEPYXXXXXXXXXXXXXXRRYRDKYQLHQKGKIGILLDFVWYEPFSDSN 397
G+S EPY Y KY+ Q+G+IGI + WY P + S+
Sbjct: 352 GDSAREPYTVTHNIILAHAEAVALYNAKYKPAQRGQIGITVVSNWYVPTNASS 194
>gb|CD232926.1|CD232926 SS1_10_A10.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_10_A10_A012 5', mRNA sequence
Length = 632
Score = 79.9 bits (168), Expect(2) = 4e-032
Identities = 30/87 (34%), Positives = 52/87 (59%)
Frame = +2 / +2
Query: 317 DKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGWFLDPIVHGRYPYSMQEI 496
+K+ +KG+IG+ L+ + P+ + ++LGW+L+P+V G YP+SM+
Sbjct: 371 NKFHRGEKGRIGLALNVMGTVPYGSTFLDEQAQERCMDYNLGWYLEPVVRGDYPHSMRSS 550
Query: 497 AKDRLPLFSDEEARMAKGSIDYVGINH 577
+DRLP F++ E + GS D +GIN+
Sbjct: 551 VRDRLPHFTEXEQQKLVGSYDMIGINY 631
Score = 79.4 bits (167), Expect(2) = 4e-032
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = +2 / +2
Query: 62 GWLSPKIVEAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
G+L +I++ + D+A CF FGDRV NW TFNEP L Y G+ APGRCS
Sbjct: 107 GFLDKRIIKDYTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCS 268
>gb|CD208589.1|CD208589 HS1_38_B10.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_38_B10_A012 5', mRNA sequence
Length = 594
Score = 86.3 bits (182), Expect(2) = 1e-031
Identities = 32/90 (35%), Positives = 56/90 (62%)
Frame = +2 / +1
Query: 317 DKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGWFLDPIVHGRYPYSMQEI 496
+K+ +KG+IG+ L+ + P+ + ++LGW+L+P+V G YP+SM+
Sbjct: 241 NKFHRGEKGRIGLALNVMGTVPYGSTFLDEQAQERCMDYNLGWYLEPVVRGDYPHSMRSS 420
Query: 497 AKDRLPLFSDEEARMAKGSIDYVGINHYTS 586
+DRLP F+++E + GS D +GIN+Y+S
Sbjct: 421 VRDRLPHFTEKEQQKLVGSYDMIGINYYSS 510
Score = 71.2 bits (149), Expect(2) = 1e-031
Identities = 25/44 (56%), Positives = 28/44 (63%)
Frame = +2 / +1
Query: 92 FADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
+ D+A CF FGDRV NW TFNEP L Y G+ APGRCS
Sbjct: 7 YTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCS 138
>gb|CD432578.1|CD432578 ETH1_30_D10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_30_D10_A002 5', mRNA sequence
Length = 769
Score = 79.4 bits (167), Expect(2) = 2e-031
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = +2 / +2
Query: 62 GWLSPKIVEAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
G+L +I++ + D+A CF FGDRV NW TFNEP L Y G+ APGRCS
Sbjct: 242 GFLDKRIIKDYTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCS 403
Score = 77.6 bits (163), Expect(2) = 2e-031
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +2 / +3
Query: 335 QKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGWFLDPIVHGRYPYSMQEIAKDRLP 514
+KG+IG+ L+ + P+ + ++LGW+L+P+V G YP+SM+ +DRLP
Sbjct: 525 EKGRIGLALNVMGTVPYGSTFLDEQAHERCMDYNLGWYLEPVVRGDYPHSMRSSVRDRLP 704
Query: 515 LFSDEEARMAKGSIDYVGINH 577
F++ E + GS D +GIN+
Sbjct: 705 HFTEXEQQKLVGSYDMIGINY 767
>gb|BE125777.1|BE125777 DG1_57_B08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 535
Score = 136 bits (292), Expect = 2e-031
Identities = 51/92 (55%), Positives = 67/92 (72%)
Frame = +2 / +1
Query: 314 RDKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGWFLDPIVHGRYPYSMQE 493
R KYQL QKG+IGILLDFVWYE ++S FH+GWFL PI++G+YP S+Q+
Sbjct: 4 RGKYQLTQKGRIGILLDFVWYEALTNSTADQAAAERSRDFHVGWFLHPIIYGQYPNSVQK 183
Query: 494 IAKDRLPLFSDEEARMAKGSIDYVGINHYTSF 589
I K+RLP F+ +E + KGSIDYVG+N YT++
Sbjct: 184 IVKERLPKFTADEINIVKGSIDYVGVNQYTAY 279
>gb|CW493896.1|CW493896 fsbb001f284o06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f284o06, DNA
sequence
Length = 761
Score = 64.8 bits (135), Expect(4) = 1e-030
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +2 / +2
Query: 446 FLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVGINHYTSF 589
F DP G YP M+ DRLP F+ +EA + KG++D+VGINHYT++
Sbjct: 545 FADPFFFGDYPALMRSRVGDRLPKFTADEAALVKGALDFVGINHYTTY 688
Score = 63.8 bits (133), Expect(4) = 1e-030
Identities = 24/33 (72%), Positives = 25/33 (75%)
Frame = +2 / +1
Query: 125 FGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
FGDRVK+W T NEP VA GYD GL APGRCS
Sbjct: 1 FGDRVKHWITLNEPHTVAIQGYDAGLQAPGRCS 99
Score = 38.2 bits (77), Expect(4) = 1e-030
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2 / +2
Query: 335 QKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGW 445
Q G++GI D +W+EP +++ F LGW
Sbjct: 338 QNGELGIAFDVMWFEPMTNTTADIEAAKRGQEFQLGW 448
Score = 22.6 bits (43), Expect(4) = 1e-030
Identities = 10/31 (32%), Positives = 12/31 (38%)
Frame = +2 / +1
Query: 239 GNSTTEPYXXXXXXXXXXXXXXRRYRDKYQL 331
GNS TEPY YR Y++
Sbjct: 127 GNSGTEPYIVAHNFILAHATVSDIYRRNYKV 219
>gb|CN136543.1|CN136543 OX1_43_G11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_43_G11_A002 5', mRNA sequence
Length = 804
Score = 82.2 bits (173), Expect(2) = 5e-030
Identities = 31/90 (34%), Positives = 54/90 (60%)
Frame = +2 / +3
Query: 317 DKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGWFLDPIVHGRYPYSMQEI 496
+K+ +KG+IG+ L+ + P+ + ++L W+L+P+V G YP+SM+
Sbjct: 240 NKFHRGEKGRIGLALNVMGTVPYGSTFLDEQAHERCMDYNLRWYLEPVVRGDYPHSMRSS 419
Query: 497 AKDRLPLFSDEEARMAKGSIDYVGINHYTS 586
+DRLP F+++E GS D +GIN+Y+S
Sbjct: 420 VRDRLPHFTEKEQHKLVGSYDMIGINYYSS 509
Score = 69.8 bits (146), Expect(2) = 5e-030
Identities = 25/44 (56%), Positives = 28/44 (63%)
Frame = +2 / +3
Query: 92 FADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
+ D+A CF FGDRV NW TFNEP L Y G+ APGRCS
Sbjct: 6 YTDFAGLCFE*FGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCS 137
>gb|BF586246.1|BF586246 FM1_27_E10.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 524
Score = 86.3 bits (182), Expect(2) = 1e-029
Identities = 32/90 (35%), Positives = 56/90 (62%)
Frame = +2 / +3
Query: 317 DKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGWFLDPIVHGRYPYSMQEI 496
+K+ +KG+IG+ L+ + P+ + ++LGW+L+P+V G YP+SM+
Sbjct: 222 NKFHRGEKGRIGLALNVMGTVPYGSTFLDEQAQERCMDYNLGWYLEPVVRGDYPHSMRSS 401
Query: 497 AKDRLPLFSDEEARMAKGSIDYVGINHYTS 586
+DRLP F+++E + GS D +GIN+Y+S
Sbjct: 402 VRDRLPHFTEKEQQKLVGSYDMIGINYYSS 491
Score = 64.8 bits (135), Expect(2) = 1e-029
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = +2 / +3
Query: 113 CFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
CF FGDRV NW TFNEP L Y G+ APGRCS
Sbjct: 9 CFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCS 119
>gb|CW164218.1|CW164218 104_572_11151871_116_36465_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151871, DNA
sequence
Length = 758
Score = 118 bits (253), Expect(2) = 2e-029
Identities = 45/82 (54%), Positives = 52/82 (63%)
Frame = +2 / -2
Query: 86 EAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCSGCPAGGNSTTEPYX 265
+ F DYA+FCF +GDRVK+WFTFNEPR A LGYD G + P RC+ C AGGNS TEPY
Sbjct: 352 DLFTDYADFCFKTYGDRVKHWFTFNEPRIAALLGYDVGSNPPQRCTKCAAGGNSATEPYI 173
Query: 266 XXXXXXXXXXXXXRRYRDKYQL 331
RYR KYQ+
Sbjct: 172 VAHNFLLAHAAAVARYRTKYQV 107
Score = 32.7 bits (65), Expect(2) = 2e-029
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3 / -3
Query: 15 NLYHYDLPLALHEQTWAGLAQRL 83
NLYHYDLPLAL ++ L+ ++
Sbjct: 639 NLYHYDLPLALEKKYGGWLSAKM 571
>gb|BM323743.1|BM323743 PIC1_22_G06.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 515
Score = 78.5 bits (165), Expect(2) = 3e-029
Identities = 33/86 (38%), Positives = 42/86 (48%)
Frame = +2 / +1
Query: 239 GNSTTEPYXXXXXXXXXXXXXXRRYRDKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXX 418
GNSTTEPY YR +YQ Q G IGI + +WYEPF ++
Sbjct: 250 GNSTTEPYIAGHNMILSHANAVSVYRKRYQEKQGGHIGISICAIWYEPFGNTTADILAVE 429
Query: 419 XXXXFHLGWFLDPIVHGRYPYSMQEI 496
F WFLDP++ G YP M++I
Sbjct: 430 RALSFGGPWFLDPLILGDYPIEMRKI 507
Score = 71.2 bits (149), Expect(2) = 3e-029
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 62 GWLSPKIVEAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
GWLSP+I + F +AE CF FGDRVK W TFN+ Y +G + P RCS
Sbjct: 64 GWLSPEIQKDFGYFAEVCFKMFGDRVKFWITFNQANLSLKFSYMDGWYPPSRCS 225
>gb|BM323664.1|BM323664 PIC1_21_H06.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 548
Score = 75.3 bits (158), Expect(2) = 7e-029
Identities = 32/88 (36%), Positives = 41/88 (46%)
Frame = +2 / +2
Query: 224 GCPAGGNSTTEPYXXXXXXXXXXXXXXRRYRDKYQLHQKGKIGILLDFVWYEPFSDSNXX 403
G A GNS EPY Y+ KYQ QKG IGI++ W+ P +D+
Sbjct: 284 GSCAQGNSDAEPYVATHNVVLSHATAVEIYKRKYQRKQKGMIGIVMAAFWFVPLTDTPVD 463
Query: 404 XXXXXXXXXFHLGWFLDPIVHGRYPYSM 487
F + W+LDPIV+G YP M
Sbjct: 464 RMATERALAFSVPWYLDPIVYGDYPPEM 547
Score = 73.0 bits (153), Expect(2) = 7e-029
Identities = 28/53 (52%), Positives = 33/53 (62%)
Frame = +2 / +2
Query: 65 WLSPKIVEAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
WLS ++ F A+ CF AFGDRVK+W TFNEP GY G + PGRCS
Sbjct: 116 WLSTEVQRDFGYLADVCFAAFGDRVKHWATFNEPNVAMTKGYMLGTYPPGRCS 274
>gb|BG556907.1|BG556907 EM1_40_B08.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 556
Score = 123 bits (264), Expect(2) = 3e-028
Identities = 49/116 (42%), Positives = 66/116 (56%)
Frame = +2 / +2
Query: 239 GNSTTEPYXXXXXXXXXXXXXXRRYRDKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXX 418
GNSTTEPY YR+KYQ Q G+IG+ L WYEP +++
Sbjct: 86 GNSTTEPYIAAHHLVLAHASAVSLYREKYQAEQGGRIGLTLLGWWYEPATETPDDIAAAA 265
Query: 419 XXXXFHLGWFLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVGINHYTS 586
FH+GWF+ P+V+G YP M++ RLP F++EEA+ KGS D+VG NHY +
Sbjct: 266 RMNDFHVGWFMHPMVYGDYPPVMRKNVGSRLPSFTNEEAKRVKGSFDFVGFNHYVA 433
Score = 22.1 bits (42), Expect(2) = 3e-028
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2 / +2
Query: 185 GYDNGLHAPGRCS 223
G+D G+ P RCS
Sbjct: 20 GFDQGILPPQRCS 58
>gb|BE361500.1|BE361500 DG1_81_B12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 641
Score = 115 bits (246), Expect(2) = 4e-027
Identities = 50/120 (41%), Positives = 63/120 (52%)
Frame = +2 / +1
Query: 239 GNSTTEPYXXXXXXXXXXXXXXRRYRDKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXX 418
GNSTTEPY YR KYQ Q G+IG+ L WYEP +
Sbjct: 115 GNSTTEPYVVAHHLLLAHASAVSLYRRKYQGEQGGRIGLTLLAYWYEPATHKPEDVQAAA 294
Query: 419 XXXXFHLGWFLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVGINHYTSFLHE 598
F LGWF+ P+VHG YP M+ A RLP+ + +E+ M +GS D+VGIN Y + L E
Sbjct: 295 RANDFTLGWFMHPLVHGDYPPVMRRNAGSRLPVLTAQESAMVRGSFDFVGINQYGALLVE 474
Score = 26.7 bits (52), Expect(2) = 4e-027
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2 / +1
Query: 158 NEPRCVAALGYDNGLHAPGRCS 223
NEP GYD G P RCS
Sbjct: 13 NEPNIEPLGGYDQGYLPPRRCS 78
>gb|CW224101.1|CW224101 104_660_11203270_116_37444_091 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11203270, DNA
sequence
Length = 698
Score = 75.3 bits (158), Expect(2) = 5e-027
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = +2 / +2
Query: 437 LGWFLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVGINHYTS 586
LGWFL+P+V G YP+SM+ A+DR+P F ++E GS D +GIN+YTS
Sbjct: 518 LGWFLEPVVRGDYPFSMRVSARDRVPYFKEKEQEKLVGSYDMIGINYYTS 667
Score = 68.4 bits (143), Expect(2) = 5e-027
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +2 / +3
Query: 92 FADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
+ D+A+ CF FG +VKNW TFNEP ++ Y G+ APGRCS
Sbjct: 33 YTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGRCS 164
>gb|U33817.1|SBU33817 Sorghum bicolor dhurrinase mRNA, nuclear gene encoding chloroplast
protein, complete cds
Length = 1983
Score = 75.3 bits (158), Expect(2) = 5e-027
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = +2 / +2
Query: 437 LGWFLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVGINHYTS 586
LGWFL+P+V G YP+SM+ A+DR+P F ++E GS D +GIN+YTS
Sbjct: 1073 LGWFLEPVVRGDYPFSMRVSARDRVPYFKEKEQEKLVGSYDMIGINYYTS 1222
Score = 69.8 bits (146), Expect(2) = 5e-027
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +2 / +2
Query: 62 GWLSPKIVEAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
G+L + + + D+A+ CF FG VKNW TFNEP ++ Y G+ APGRCS
Sbjct: 689 GFLDEEDYKDYTDFAKVCFEKFGKTVKNWLTFNEPETFCSVSYGTGVLAPGRCS 850
>gb|CW053338.1|CW053338 104_293_10515908_114_30185 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515908, DNA
sequence
Length = 660
Score = 99.6 bits (211), Expect(2) = 3e-026
Identities = 39/70 (55%), Positives = 44/70 (62%)
Frame = +2 / +3
Query: 122 AFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCSGCPAGGNSTTEPYXXXXXXXXXXXXX 301
+FGD VK+WFTFNEPR VA LGYD G P RC+ C AGGNS TEPY
Sbjct: 3 SFGDHVKHWFTFNEPRIVALLGYDGGSIPPQRCTKCAAGGNSATEPYIVAHNFLLSHAAA 182
Query: 302 XRRYRDKYQL 331
RYR+KYQ+
Sbjct: 183 VARYRNKYQV 212
Score = 41.4 bits (84), Expect(2) = 3e-026
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2 / +2
Query: 335 QKGKIGILLDFVWYEPFSDS 394
QKGK+GI+LDF WYEP ++S
Sbjct: 599 QKGKVGIVLDFNWYEPLTNS 658
>gb|CW053211.1|CW053211 104_293_10515837_114_30184 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515837, DNA
sequence
Length = 664
Score = 99.6 bits (211), Expect(2) = 3e-026
Identities = 39/70 (55%), Positives = 44/70 (62%)
Frame = +2 / +3
Query: 122 AFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCSGCPAGGNSTTEPYXXXXXXXXXXXXX 301
+FGD VK+WFTFNEPR VA LGYD G P RC+ C AGGNS TEPY
Sbjct: 3 SFGDHVKHWFTFNEPRIVALLGYDGGSIPPQRCTKCAAGGNSATEPYIVAHNFLLSHAAA 182
Query: 302 XRRYRDKYQL 331
RYR+KYQ+
Sbjct: 183 VARYRNKYQV 212
Score = 41.4 bits (84), Expect(2) = 3e-026
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2 / +2
Query: 335 QKGKIGILLDFVWYEPFSDS 394
QKGK+GI+LDF WYEP ++S
Sbjct: 599 QKGKVGIVLDFNWYEPLTNS 658
>gb|CW117040.1|CW117040 104_493_11107445_148_34610_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11107445, DNA
sequence
Length = 714
Score = 64.8 bits (135), Expect(4) = 5e-026
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +2 / -2
Query: 446 FLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVGINHYTSF 589
F DP G YP M+ DRLP F+ +EA + KG++D+VGINHYT++
Sbjct: 185 FADPFFFGDYPALMRSRVGDRLPKFTADEAALVKGALDFVGINHYTTY 42
Score = 47.8 bits (98), Expect(4) = 5e-026
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +2 / -1
Query: 140 KNWFTFNEPRCVAALGYDNGLHAPGRCS 223
K+W T NEP + GYD GL APGRCS
Sbjct: 714 KHWITLNEPHTLPIQGYDAGLQAPGRCS 631
Score = 38.2 bits (77), Expect(4) = 5e-026
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2 / -2
Query: 335 QKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGW 445
Q G++GI D +W+EP +++ F LGW
Sbjct: 392 QNGELGIAFDVMWFEPMTNTTADIEAAKRGQEFQLGW 282
Score = 22.6 bits (43), Expect(4) = 5e-026
Identities = 10/31 (32%), Positives = 12/31 (38%)
Frame = +2 / -1
Query: 239 GNSTTEPYXXXXXXXXXXXXXXRRYRDKYQL 331
GNS TEPY YR Y++
Sbjct: 603 GNSGTEPYIVAHNFILAHATVSDIYRRNYKV 511
>gb|CN148000.1|CN148000 WOUND1_53_C12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_53_C12_A002 5', mRNA sequence
Length = 577
Score = 80.3 bits (169), Expect(2) = 9e-026
Identities = 29/57 (50%), Positives = 36/57 (63%)
Frame = +2 / +3
Query: 53 TDLGWLSPKIVEAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
T G+L +I++ + D+A CF FGDRV NW TFNEP L Y G+ APGRCS
Sbjct: 87 TTAGFLDKRIIKDYTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYRTGILAPGRCS 257
Score = 57.4 bits (119), Expect(2) = 9e-026
Identities = 22/72 (30%), Positives = 41/72 (56%)
Frame = +2 / +3
Query: 317 DKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGWFLDPIVHGRYPYSMQEI 496
+K+ +KG+IG+ L+ + P+ + ++ W L+P+V G YP+SM+
Sbjct: 360 NKFHRGEKGRIGLALNVMGTVPYGSTFLDEQAHERCMDYNRRWDLEPVVRGDYPHSMRSS 539
Query: 497 AKDRLPLFSDEE 532
+DRLP F+++E
Sbjct: 540 VRDRLPHFTEKE 575
>gb|CW339174.1|CW339174 104_839_11485133_116_36134_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485133, DNA
sequence
Length = 649
Score = 66.6 bits (139), Expect(3) = 5e-025
Identities = 26/44 (59%), Positives = 29/44 (65%)
Frame = +2 / +1
Query: 92 FADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
+ D+AE CF FGDRVK W TFNEP + GY G APGRCS
Sbjct: 196 YVDFAEVCFKEFGDRVKAWTTFNEPWTYSYQGYAVGKSAPGRCS 327
Score = 49.2 bits (101), Expect(3) = 5e-025
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2 / +1
Query: 431 FHLGWFLDPIVHGRYPYSMQEIAKDRLPLFS 523
F GWFLDPIVHG YP +M DRLP F+
Sbjct: 550 FMYGWFLDPIVHGEYPGTMLGYLGDRLPRFT 642
Score = 37.3 bits (75), Expect(3) = 5e-025
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2 / +1
Query: 239 GNSTTEPYXXXXXXXXXXXXXXRRYRDKYQLHQKGKIGILLDFVWYEPFSDSN 397
G+S EPY Y KY+ Q+G+IGI + WY P + S+
Sbjct: 355 GDSAREPYTVTHNIILAHAEAVALYNAKYKPAQRGQIGITVVSNWYVPTNASS 513
>gb|CW188764.1|CW188764 104_608_11173219_116_36729_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11173219, DNA
sequence
Length = 632
Score = 114 bits (244), Expect = 1e-024
Identities = 44/78 (56%), Positives = 50/78 (64%)
Frame = +2 / -1
Query: 98 DYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCSGCPAGGNSTTEPYXXXXX 277
DYA+FCF + GD VK+WFTFNEPR VA LGYD G P RC+ C AGGNS TEPY
Sbjct: 629 DYADFCFKSLGDHVKHWFTFNEPRIVALLGYDGGSIPPQRCTKCAAGGNSATEPYIVAHN 450
Query: 278 XXXXXXXXXRRYRDKYQL 331
RYR+KYQ+
Sbjct: 449 FLLSHAAAVARYRNKYQV 396
>gb|CL189648.1|CL189648 104_407_10905518_114_32476_061 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10905518, DNA
sequence
Length = 749
Score = 63.4 bits (132), Expect(3) = 2e-024
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = +2 / +2
Query: 92 FADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
F YA+ CF FGDRV +W T EP +A YD G+ APGRCS
Sbjct: 32 FTAYADVCFREFGDRVAHWTTMMEPNIIAQGSYDIGIVAPGRCS 163
Score = 57.9 bits (120), Expect(3) = 2e-024
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +2 / +3
Query: 449 LDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVGINHYTS 586
L+P + G YP SM++ A RLP FS E+ + G+ D++G+NHY+S
Sbjct: 570 LNPFLFGDYPESMKKAAGARLPSFSSYESELVTGAFDFIGLNHYSS 707
Score = 32.2 bits (64), Expect(3) = 2e-024
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2 / +2
Query: 239 GNSTTEPYXXXXXXXXXXXXXXRRYRDKYQL 331
GNST EPY R YR+KYQ+
Sbjct: 191 GNSTVEPYLFLHYNLLAHSSVVRLYREKYQV 283
>gb|CW299015.1|CW299015 104_781_11462882_148_35655_001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462882, DNA
sequence
Length = 710
Score = 78.5 bits (165), Expect(2) = 5e-024
Identities = 28/47 (59%), Positives = 39/47 (82%)
Frame = +2 / +2
Query: 446 FLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVGINHYTS 586
FLDP+++G+YP +MQ+I KDRLP F+ E+A++ KGS DY GIN YT+
Sbjct: 227 FLDPLINGQYPKTMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTT 367
Score = 53.3 bits (110), Expect(2) = 5e-024
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2 / +3
Query: 335 QKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGW 445
QKGK+GI+LDF WYEP ++S FH+GW
Sbjct: 33 QKGKVGIVLDFNWYEPLTNSTEDQAAAQRARDFHIGW 143
>gb|BE595092.1|BE595092 PI1_45_E09.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 497
Score = 111 bits (238), Expect = 7e-024
Identities = 44/111 (39%), Positives = 61/111 (54%)
Frame = +2 / +2
Query: 254 EPYXXXXXXXXXXXXXXRRYRDKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXF 433
EPY YR+KYQ Q G+IG+ L WYEP +++ F
Sbjct: 11 EPYIAAHHLVLAHASAVSLYREKYQAEQGGRIGLTLLGWWYEPATETPDDIAAAARMNDF 190
Query: 434 HLGWFLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVGINHYTS 586
H+GWF+ P+V+G YP M++ RLP F++EEA+ KGS D+VG NHY +
Sbjct: 191 HVGWFMHPMVYGDYPPVMRKNVGSRLPSFTNEEAKRVKGSFDFVGFNHYVA 343
>gb|AW923117.1|AW923117 DG1_49_C11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 421
Score = 85.8 bits (181), Expect(2) = 7e-024
Identities = 35/95 (36%), Positives = 45/95 (47%)
Frame = +2 / +2
Query: 239 GNSTTEPYXXXXXXXXXXXXXXRRYRDKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXX 418
GNS EPY R Y++ YQ Q G IGI+ WYEP +++
Sbjct: 134 GNSHREPYVAAHNIIMSHAAAVRNYKESYQAKQGGSIGIVTAMKWYEPLTNTTEDILAAR 313
Query: 419 XXXXFHLGWFLDPIVHGRYPYSMQEIAKDRLPLFS 523
F WFLDPI G YP +M+EI + LP F+
Sbjct: 314 RAQPFETEWFLDPIFFGDYPRAMREILQSNLPTFT 418
Score = 45.5 bits (93), Expect(2) = 7e-024
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = +2 / +2
Query: 116 FHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
F AFGDRV+ W TFNEP Y G++ P CS
Sbjct: 2 FAAFGDRVRFWTTFNEPNLSTKFQYMLGVYPPRHCS 109
>gb|CN147980.1|CN147980 WOUND1_53_A07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_53_A07_A002 5', mRNA sequence
Length = 720
Score = 79.4 bits (167), Expect(2) = 1e-023
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = +2 / +2
Query: 62 GWLSPKIVEAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
G+L +I++ + D+A CF FGDRV NW TFNEP L Y G+ APGRCS
Sbjct: 260 GFLDKRIIKDYTDFAGLCFERFGDRVNNWLTFNEPHTFTCLSYGTGILAPGRCS 421
Score = 51.5 bits (106), Expect(2) = 1e-023
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +2 / +2
Query: 317 DKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGWFLDPIVHGRYPYSMQEI 496
+K+ +KG+IG+ L+ + P+ + ++L W+L+P+V G YP+S +
Sbjct: 524 NKFHRGEKGRIGLALNVMGTVPYGSTFLDEQAHERCMDYNLRWYLEPVVRGDYPHSKRSS 703
Query: 497 AKDRL 511
+DRL
Sbjct: 704 VRDRL 718
>gb|CL167735.1|CL167735 104_364_10810290_114_31802_354 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10810290, DNA
sequence
Length = 732
Score = 111 bits (236), Expect = 1e-023
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +2 / -3
Query: 446 FLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVGINHYTSF 589
FLDPI++GRYPYSMQEI KDRLPLFSDEE+RM KGSIDYVGINHYTSF
Sbjct: 553 FLDPIINGRYPYSMQEIVKDRLPLFSDEESRMVKGSIDYVGINHYTSF 410
>gb|CW426316.1|CW426316 fsbb001f137k07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f137k07, DNA
sequence
Length = 662
Score = 111 bits (236), Expect = 1e-023
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +2 / -1
Query: 446 FLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVGINHYTSF 589
FLDPI++GRYPYSMQEI KDRLPLFSDEE+RM KGSIDYVGINHYTSF
Sbjct: 464 FLDPIINGRYPYSMQEIVKDRLPLFSDEESRMVKGSIDYVGINHYTSF 321
>gb|CN148142.1|CN148142 WOUND1_54_A06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_54_A06_A002 5', mRNA sequence
Length = 795
Score = 70.3 bits (147), Expect(3) = 3e-023
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +2
Query: 62 GWLSPKIVEAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
G LSP+ +E + YA+ CF FGDRVK W T NEP G+D G+ P RCS
Sbjct: 434 GLLSPRFIEDYTAYADVCFKNFGDRVKYWSTVNEPNIETIGGFDQGILPPQRCS 595
Score = 54.2 bits (112), Expect(3) = 3e-023
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +2 / +2
Query: 239 GNSTTEPYXXXXXXXXXXXXXXRRYRDKYQLHQKGKIGILLDFVWYEPFSDS 394
GNSTTEPY YR+KYQ Q G+IG+ L WYEP +++
Sbjct: 623 GNSTTEPYIAAHHLVLAHASAVSLYREKYQAEQGGRIGLTLLGWWYEPATET 778
Score = 22.6 bits (43), Expect(3) = 3e-023
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 18 LYHYDLPLALHEQ 56
+YH+D P AL ++
Sbjct: 389 IYHFDFPQALQDE 427
>gb|CD229624.1|CD229624 CCC1_17_E12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_17_E12_A007 5', mRNA sequence
Length = 660
Score = 70.3 bits (147), Expect(3) = 3e-023
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 62 GWLSPKIVEAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
G LSP+ +E + YA+ CF FGDRVK W T NEP G+D G+ P RCS
Sbjct: 277 GLLSPRFIEDYTAYADVCFKNFGDRVKYWSTVNEPNIETIGGFDQGILPPQRCS 438
Score = 54.2 bits (112), Expect(3) = 3e-023
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +2 / +1
Query: 239 GNSTTEPYXXXXXXXXXXXXXXRRYRDKYQLHQKGKIGILLDFVWYEPFSDS 394
GNSTTEPY YR+KYQ Q G+IG+ L WYEP +++
Sbjct: 466 GNSTTEPYIAAHHLVLAHASAVSLYREKYQAEQGGRIGLTLLGWWYEPATET 621
Score = 22.6 bits (43), Expect(3) = 3e-023
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3 / +1
Query: 18 LYHYDLPLALHEQ 56
+YH+D P AL ++
Sbjct: 232 IYHFDFPQALQDE 270
>gb|BE595073.1|BE595073 PI1_45_C11.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 660
Score = 105 bits (223), Expect(2) = 3e-023
Identities = 42/116 (36%), Positives = 61/116 (52%)
Frame = +2 / +1
Query: 239 GNSTTEPYXXXXXXXXXXXXXXRRYRDKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXX 418
GNS+ EPY R YR+KYQ QKG +GI + +W P ++S
Sbjct: 82 GNSSVEPYIAAHNMLLAHASATRLYREKYQAVQKGVVGINIYTMWAYPLTNSTADLEASQ 261
Query: 419 XXXXFHLGWFLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVGINHYTS 586
F+ GW L+P+V G YP +++ RLP F ++ +G+ID++GINHY S
Sbjct: 262 RFLDFYCGWILEPLVFGDYPSVVKKNVGSRLPSFRKVQSEAIRGTIDFIGINHYLS 429
Score = 24.0 bits (46), Expect(2) = 3e-023
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2 / +1
Query: 188 YDNGLHAPGRCS 223
YD G APGRCS
Sbjct: 10 YDIGQIAPGRCS 45
>gb|CW159823.1|CW159823 104_566_11149558_148_36423_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149558, DNA
sequence
Length = 715
Score = 84.0 bits (177), Expect(3) = 1e-022
Identities = 32/44 (72%), Positives = 34/44 (77%)
Frame = +2 / -2
Query: 92 FADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
FA+YAE CF AFGDRVK+W T NEP VA GYD GL APGRCS
Sbjct: 567 FAEYAETCFKAFGDRVKHWITLNEPHTVAIQGYDAGLQAPGRCS 436
Score = 38.2 bits (77), Expect(3) = 1e-022
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2 / -3
Query: 335 QKGKIGILLDFVWYEPFSDSNXXXXXXXXXXXFHLGW 445
Q G++GI D +W+EP +++ F LGW
Sbjct: 197 QNGELGIAFDVMWFEPMTNTTADIEAAKRGQEFQLGW 87
Score = 22.6 bits (43), Expect(3) = 1e-022
Identities = 10/31 (32%), Positives = 12/31 (38%)
Frame = +2 / -2
Query: 239 GNSTTEPYXXXXXXXXXXXXXXRRYRDKYQL 331
GNS TEPY YR Y++
Sbjct: 408 GNSGTEPYIVAHNFILAHATVSDIYRRNYKV 316
>gb|CW183756.1|CW183756 104_599_11164783_148_36676_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164783, DNA
sequence
Length = 630
Score = 68.4 bits (143), Expect(2) = 2e-022
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +2 / -2
Query: 92 FADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
+ D+A+ CF FG +VKNW TFNEP ++ Y G+ APGRCS
Sbjct: 614 YTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGRCS 483
Score = 59.7 bits (124), Expect(2) = 2e-022
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +2 / -1
Query: 437 LGWFLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYV 565
LGWFL+P+V G YP+SM+ A+DR+P F ++E GS D +
Sbjct: 129 LGWFLEPVVRGDYPFSMRVSARDRVPYFKEKEQEKLVGSYDMI 1
>gb|CX612987.1|CX612987 GABR1_5_C11.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_5_C11_A002 5', mRNA sequence
Length = 779
Score = 82.6 bits (174), Expect(3) = 2e-022
Identities = 31/54 (57%), Positives = 37/54 (68%)
Frame = +2 / +3
Query: 62 GWLSPKIVEAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS 223
GWLSP+IV+ F YA+ CF FGDRV +W T EP +A YD G+ APGRCS
Sbjct: 477 GWLSPRIVDDFTAYADVCFREFGDRVAHWTTMMEPNIIAQGSYDIGIVAPGRCS 638
Score = 38.6 bits (78), Expect(3) = 2e-022
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2 / +3
Query: 239 GNSTTEPYXXXXXXXXXXXXXXRRYRDKYQLHQKGKIG 352
GNST EPY R YR+KYQ +KG +G
Sbjct: 666 GNSTVEPYLFLHYNLLAHSSVVRLYREKYQAVRKGVVG 779
Score = 22.6 bits (43), Expect(3) = 2e-022
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3 / +3
Query: 18 LYHYDLPLALHEQTWAGLAQRL 83
LYH DLP L ++ L+ R+
Sbjct: 432 LYHLDLPQILEDEYNGWLSPRI 497
>gb|CN143487.1|CN143487 WOUND1_16_C08.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_16_C08_A002 5', mRNA sequence
Length = 811
Score = 105 bits (224), Expect = 6e-022
Identities = 43/114 (37%), Positives = 56/114 (49%)
Frame = +2 / +1
Query: 239 GNSTTEPYXXXXXXXXXXXXXXRRYRDKYQLHQKGKIGILLDFVWYEPFSDSNXXXXXXX 418
GNS+TEPY YR Y++ Q G IGI L WYEP +
Sbjct: 109 GNSSTEPYIAAHNMILAHAMAVNIYRKNYKVKQGGSIGISLYMRWYEPLRNITEDHLAVS 288
Query: 419 XXXXFHLGWFLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMAKGSIDYVGINHY 580
F WFLDP+ G YP+ M++I LP F+ E ++ K ID++GINHY
Sbjct: 289 RALSFQAPWFLDPLFFGDYPHQMRQILGPNLPKFTKGEKQLLKNQIDFIGINHY 450
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 855,787,302
Number of Sequences: 832831
Number of extensions: 14115426
Number of successful extensions: 196693
Number of sequences better than 1.0e-020: 61
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 17348744385
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)