TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3713493.2.1
(696 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW286012.1|CW286012 104_763_11410651_148_35507_072 Sorgh... 150 6e-059
gb|CD210150.1|CD210150 HS1_57_H06.b1_A012 Heat-shocked seed... 168 3e-058
gb|BG932947.1|BG932947 DG1_69_C12.g1_A002 Dark Grown 1 (DG1... 168 1e-055
gb|CD207350.1|CD207350 HS1_65_A10.b1_A012 Heat-shocked seed... 168 1e-055
gb|CD423742.1|CD423742 SA1_1_G06.b1_A002 Salicylic acid-tre... 168 1e-055
gb|CW068657.1|CW068657 104_317_10525236_115_30116 Sorghum m... 166 3e-053
gb|CD461585.1|CD461585 SA1_33_H10.b1_A002 Salicylic acid-tr... 168 3e-051
gb|CF072067.1|CF072067 FE1_20_D03.b1_A002 Iron-deficient se... 165 1e-046
gb|CF757924.1|CF757924 DSAF1_25_A12.g1_A011 Drought-stresse... 131 7e-046
gb|CF432247.1|CF432247 NIT1_15_H11.b1_A002 Nitrogen-deficie... 100 2e-035
>gb|CW286012.1|CW286012 104_763_11410651_148_35507_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11410651, DNA
sequence
Length = 622
Score = 150 bits (323), Expect(5) = 7e-046
Identities = 64/68 (94%), Positives = 65/68 (95%)
Frame = +1 / -1
Query: 454 YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*LESTITGLPDTAMVISYPRLCCFPSNA 633
YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*L STITGLPDTAMVIS PRLCCFPSN
Sbjct: 205 YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*LTSTITGLPDTAMVIS*PRLCCFPSNT 26
Query: 634 SLLGVTVT 657
SLLG+TVT
Sbjct: 25 SLLGLTVT 2
Score = 147 bits (315), Expect(8) = 6e-059
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = -2 / +3
Query: 656 VTVTPSKLAFDGKQQSLGYEITIAVSGNPVIVDSSYSFGSITWSDGAHDVTSPIAVTWPS 477
VTV+PSKL FDGKQQSLGYEITIAVSGNPVIVD SYSFGSITWSDGAHDVTSPIAVTWPS
Sbjct: 3 VTVSPSKLVFDGKQQSLGYEITIAVSGNPVIVDVSYSFGSITWSDGAHDVTSPIAVTWPS 182
Query: 476 NGG 468
NGG
Sbjct: 183 NGG 191
Score = 140 bits (301), Expect(4) = 2e-038
Identities = 57/68 (83%), Positives = 59/68 (86%)
Frame = +3 / -3
Query: 453 LHGCCSTVGRPGHGNGARDVVRAVAPGDGSERVAGIHDHRVA*HCDGDFVSQALLLPVER 632
LHGCCSTVGRPGHGNGA DVVR VAPGDG ERVA +HDHRVA*H DGD V+ ALLLPVE
Sbjct: 206 LHGCCSTVGRPGHGNGAGDVVRTVAPGDGPERVADVHDHRVA*HRDGDLVA*ALLLPVEH 27
Query: 633 ELARGHRD 656
ELAR HRD
Sbjct: 26 ELARAHRD 3
Score = 105 bits (225), Expect(5) = 2e-033
Identities = 43/54 (79%), Positives = 47/54 (87%)
Frame = -3 / +1
Query: 601 TKSPSQCQATR*SWIPATRSDPSPGATARTTSRAPLP*PGRPTVEQQPCSRLML 440
T+SPS+CQATR*SW ATRS PSPGAT RTTS APLP*PGRPTVEQQPC ++L
Sbjct: 58 TRSPSRCQATR*SWTSATRSGPSPGATVRTTSPAPLP*PGRPTVEQQPCRLMLL 219
Score = 37.3 bits (75), Expect(8) = 6e-059
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1 / +1
Query: 117 LCWHVYSTMLCVCH 76
L WHVYS+MLCVCH
Sbjct: 505 LNWHVYSSMLCVCH 546
Score = 34.5 bits (69), Expect(5) = 2e-033
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / +1
Query: 441 CCYCLPLWEEGQGHEPMRSEISTPPACHRNN 349
CCY L LWEE QGH+ S P R N
Sbjct: 223 CCYWLLLWEEEQGHQIRDLHASCLPLFTRLN 315
Score = 34.1 bits (68), Expect(5) = 7e-046
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1 / -2
Query: 55 LFSMRTQVTYTKHGAINVPA*KK 123
+ T+VT+TKH AIN+P *KK
Sbjct: 567 MLDRNTEVTHTKHRAINMPV*KK 499
Score = 31.8 bits (63), Expect(8) = 6e-059
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +2
Query: 489 DLAVQRWSSSHV 454
DLAVQRWSSSHV
Sbjct: 170 DLAVQRWSSSHV 205
Score = 30.4 bits (60), Expect(8) = 6e-059
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -3 / +1
Query: 394 HEIRNLHASCLP 359
H+IR+LHASCLP
Sbjct: 262 HQIRDLHASCLP 297
Score = 30.4 bits (60), Expect(8) = 6e-059
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 442 LLLLSTAVGRRSGP 401
LLLL+TAVGRR+GP
Sbjct: 222 LLLLATAVGRRTGP 263
Score = 27.6 bits (54), Expect(4) = 2e-038
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2 / -3
Query: 74 K*HTQSMVL*TCQHRK 121
K*HTQS+ L*TCQ ++
Sbjct: 548 K*HTQSIEL*TCQFKR 501
Score = 27.2 bits (53), Expect(5) = 2e-033
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2 / +2
Query: 122 FFYAGTFIAPCFVYVTCV 69
FF G FIA CFV VT V
Sbjct: 500 FF*TGMFIALCFVCVTSV 553
Score = 27.2 bits (53), Expect(5) = 7e-046
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / -2
Query: 397 LMALTFFPQR*TVAT 441
LMAL FFPQ+* VAT
Sbjct: 267 LMALFFFPQQ*PVAT 223
Score = 27.2 bits (53), Expect(8) = 6e-059
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +3
Query: 353 IISSTEPRNNSAAP 312
I+ ST PRNNSAAP
Sbjct: 297 IVYST*PRNNSAAP 338
Score = 26.7 bits (52), Expect(5) = 2e-033
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +1
Query: 349 FPRLNHAIIQLP 314
F RLNH IIQLP
Sbjct: 301 FTRLNHGIIQLP 336
Score = 25.8 bits (50), Expect(4) = 2e-038
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / -1
Query: 402 GPDLLPTAVDSSN 440
GP LLPTAV SSN
Sbjct: 262 GPVLLPTAVASSN 224
Score = 24.4 bits (47), Expect(8) = 6e-059
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -1 / +2
Query: 144 RNNHCTMFF 118
RN+HCT+FF
Sbjct: 479 RNDHCTIFF 505
Score = 24.0 bits (46), Expect(4) = 2e-038
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1 / -1
Query: 358 MAGRRRGDFGSHGLMAL 408
MAG RGD GS G + L
Sbjct: 298 MAGMMRGDLGSDGPVLL 248
Score = 23.5 bits (45), Expect(5) = 7e-046
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 359 WQAGGVEISDLM 394
WQA VEISDLM
Sbjct: 297 WQA*CVEISDLM 262
Score = 23.5 bits (45), Expect(5) = 7e-046
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / -2
Query: 213 LQAANHIRCSNQPT 254
LQAANHI QPT
Sbjct: 411 LQAANHISTLLQPT 370
Score = 22.1 bits (42), Expect(5) = 2e-033
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1 / +3
Query: 249 VGWSSVCDWLLA 214
VG +CDWLLA
Sbjct: 375 VGVVYLCDWLLA 410
Score = 22.1 bits (42), Expect(8) = 6e-059
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / +2
Query: 253 VGWLEQRM*LAAC 215
VGW M*LAAC
Sbjct: 371 VGWSSVLM*LAAC 409
>gb|CD210150.1|CD210150 HS1_57_H06.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_57_H06_A012 3', mRNA sequence
Length = 600
Score = 168 bits (361), Expect(4) = 3e-046
Identities = 72/80 (90%), Positives = 74/80 (92%)
Frame = +1 / -3
Query: 454 YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*LESTITGLPDTAMVISYPRLCCFPSNA 633
YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*L STITGLPDTAMVIS PRLCCFPSN
Sbjct: 283 YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*LTSTITGLPDTAMVIS*PRLCCFPSNT 104
Query: 634 SLLGVTVTSTPYGLAIVGWY 693
SLLG+TVTSTP GL I+G Y
Sbjct: 103 SLLGLTVTSTPDGLTILGSY 44
Score = 167 bits (359), Expect(7) = 3e-058
Identities = 68/75 (90%), Positives = 70/75 (93%)
Frame = -2 / +3
Query: 692 YQPTIASPYGVDVTVTPSKLAFDGKQQSLGYEITIAVSGNPVIVDSSYSFGSITWSDGAH 513
Y+P I SP GVDVTV+PSKL FDGKQQSLGYEITIAVSGNPVIVD SYSFGSITWSDGAH
Sbjct: 45 YEPKIVSPSGVDVTVSPSKLVFDGKQQSLGYEITIAVSGNPVIVDVSYSFGSITWSDGAH 224
Query: 512 DVTSPIAVTWPSNGG 468
DVTSPIAVTWPSNGG
Sbjct: 225 DVTSPIAVTWPSNGG 269
Score = 155 bits (332), Expect(3) = 2e-039
Identities = 65/80 (81%), Positives = 67/80 (83%)
Frame = +3 / -2
Query: 453 LHGCCSTVGRPGHGNGARDVVRAVAPGDGSERVAGIHDHRVA*HCDGDFVSQALLLPVER 632
LHGCCSTVGRPGHGNGA DVVR VAPGDG ERVA +HDHRVA*H DGD V+ ALLLPVE
Sbjct: 284 LHGCCSTVGRPGHGNGAGDVVRTVAPGDGPERVADVHDHRVA*HRDGDLVA*ALLLPVEH 105
Query: 633 ELARGHRDIHAVRAGDRRLV 692
ELAR HRDIHA RA D LV
Sbjct: 104 ELARAHRDIHAGRADDLGLV 45
Score = 120 bits (256), Expect(4) = 1e-034
Identities = 54/84 (64%), Positives = 58/84 (69%)
Frame = -3 / +1
Query: 691 TSRRSPARTAWMXXXXXXXXXXXXXXRAWDTKSPSQCQATR*SWIPATRSDPSPGATART 512
TS RS AR AWM RA T+SPS+CQATR*SW ATRS PSPGAT RT
Sbjct: 46 TSPRSSARPAWMSR*ARASSCSTGSSRA*ATRSPSRCQATR*SWTSATRSGPSPGATVRT 225
Query: 511 TSRAPLP*PGRPTVEQQPCSRLML 440
TS APLP*PGRPTVEQQPC ++L
Sbjct: 226 TSPAPLP*PGRPTVEQQPCRLMLL 297
Score = 108 bits (230), Expect(3) = 2e-026
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = -1 / +2
Query: 696 GVPADDRQPVRRGCHGDPEQARVRREAAEPGIRNHHRSVRQPGDRGFQLLV 544
GV A DRQPVRRGCHG+PEQARVRREAAEP +R+HHR VRQPGDRG QLLV
Sbjct: 41 GVRAQDRQPVRRGCHGEPEQARVRREAAEPRLRDHHRGVRQPGDRGRQLLV 193
Score = 85.8 bits (181), Expect(3) = 8e-023
Identities = 38/45 (84%), Positives = 38/45 (84%)
Frame = +2 / -1
Query: 560 PRSPGCLTLRW*FRIPGSAASRRTRACSGSP*HPRRTGWRSSAGT 694
PRSPGCLT RW* R GSAASRRTRACSGSP*HPRRTG RS A T
Sbjct: 177 PRSPGCLTPRW*SRSLGSAASRRTRACSGSP*HPRRTG*RSWART 43
Score = 34.5 bits (69), Expect(4) = 1e-034
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / +1
Query: 441 CCYCLPLWEEGQGHEPMRSEISTPPACHRNN 349
CCY L LWEE QGH+ S P R N
Sbjct: 301 CCYWLLLWEEEQGHQIRDLHASCLPLFTRLN 393
Score = 31.8 bits (63), Expect(7) = 3e-058
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +2
Query: 489 DLAVQRWSSSHV 454
DLAVQRWSSSHV
Sbjct: 248 DLAVQRWSSSHV 283
Score = 31.3 bits (62), Expect(3) = 8e-023
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / -1
Query: 452 TTWLLLHRWTA 484
+TWLLLHRWTA
Sbjct: 285 STWLLLHRWTA 253
Score = 30.4 bits (60), Expect(7) = 3e-058
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -3 / +1
Query: 394 HEIRNLHASCLP 359
H+IR+LHASCLP
Sbjct: 340 HQIRDLHASCLP 375
Score = 30.4 bits (60), Expect(7) = 3e-058
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 442 LLLLSTAVGRRSGP 401
LLLL+TAVGRR+GP
Sbjct: 300 LLLLATAVGRRTGP 341
Score = 28.6 bits (56), Expect(3) = 2e-026
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / +3
Query: 407 RAMSP*DPKSPRLLPAI 357
R P DP+SPR++PAI
Sbjct: 327 RRTGPSDPRSPRIMPAI 377
Score = 28.6 bits (56), Expect(3) = 8e-023
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3 / -2
Query: 360 GRQEAWRFRISWAHGPDLLPTAVDSSNSISLLHGC 464
GR +AWR RI W + +NSISL C
Sbjct: 374 GRHDAWRSRI*WPCSSSHSSSQ*QQANSISLHGCC 270
Score = 27.2 bits (53), Expect(7) = 3e-058
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +3
Query: 353 IISSTEPRNNSAAP 312
I+ ST PRNNSAAP
Sbjct: 375 IVYST*PRNNSAAP 416
Score = 27.2 bits (53), Expect(4) = 3e-046
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / -1
Query: 397 LMALTFFPQR*TVAT 441
LMAL FFPQ+* VAT
Sbjct: 345 LMALFFFPQQ*PVAT 301
Score = 26.7 bits (52), Expect(4) = 1e-034
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +1
Query: 349 FPRLNHAIIQLP 314
F RLNH IIQLP
Sbjct: 379 FTRLNHGIIQLP 414
Score = 25.8 bits (50), Expect(3) = 2e-039
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / -3
Query: 402 GPDLLPTAVDSSN 440
GP LLPTAV SSN
Sbjct: 340 GPVLLPTAVASSN 302
Score = 24.4 bits (47), Expect(7) = 3e-058
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -1 / +2
Query: 144 RNNHCTMFF 118
RN+HCT+FF
Sbjct: 557 RNDHCTIFF 583
Score = 24.0 bits (46), Expect(4) = 3e-046
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1 / -3
Query: 358 MAGRRRGDFGSHGLMAL 408
MAG RGD GS G + L
Sbjct: 376 MAGMMRGDLGSDGPVLL 326
Score = 23.5 bits (45), Expect(3) = 2e-026
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / +2
Query: 345 LD*TTQ*FSCP 313
LD TT+*FSCP
Sbjct: 383 LDLTTE*FSCP 415
Score = 23.5 bits (45), Expect(3) = 2e-039
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -1
Query: 359 WQAGGVEISDLM 394
WQA VEISDLM
Sbjct: 375 WQA*CVEISDLM 340
Score = 23.5 bits (45), Expect(4) = 3e-046
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / -1
Query: 213 LQAANHIRCSNQPT 254
LQAANHI QPT
Sbjct: 489 LQAANHISTLLQPT 448
Score = 22.1 bits (42), Expect(4) = 1e-034
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1 / +3
Query: 249 VGWSSVCDWLLA 214
VG +CDWLLA
Sbjct: 453 VGVVYLCDWLLA 488
Score = 22.1 bits (42), Expect(7) = 3e-058
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / +2
Query: 253 VGWLEQRM*LAAC 215
VGW M*LAAC
Sbjct: 449 VGWSSVLM*LAAC 487
>gb|BG932947.1|BG932947 DG1_69_C12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 571
Score = 168 bits (361), Expect(4) = 4e-046
Identities = 72/80 (90%), Positives = 74/80 (92%)
Frame = +1 / -1
Query: 454 YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*LESTITGLPDTAMVISYPRLCCFPSNA 633
YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*L STITGLPDTAMVIS PRLCCFPSN
Sbjct: 298 YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*LTSTITGLPDTAMVIS*PRLCCFPSNT 119
Query: 634 SLLGVTVTSTPYGLAIVGWY 693
SLLG+TVTSTP GL I+G Y
Sbjct: 118 SLLGLTVTSTPDGLTILGSY 59
Score = 167 bits (359), Expect(6) = 1e-055
Identities = 68/75 (90%), Positives = 70/75 (93%)
Frame = -2 / +3
Query: 692 YQPTIASPYGVDVTVTPSKLAFDGKQQSLGYEITIAVSGNPVIVDSSYSFGSITWSDGAH 513
Y+P I SP GVDVTV+PSKL FDGKQQSLGYEITIAVSGNPVIVD SYSFGSITWSDGAH
Sbjct: 60 YEPKIVSPSGVDVTVSPSKLVFDGKQQSLGYEITIAVSGNPVIVDVSYSFGSITWSDGAH 239
Query: 512 DVTSPIAVTWPSNGG 468
DVTSPIAVTWPSNGG
Sbjct: 240 DVTSPIAVTWPSNGG 284
Score = 155 bits (332), Expect(3) = 1e-039
Identities = 65/80 (81%), Positives = 67/80 (83%)
Frame = +3 / -3
Query: 453 LHGCCSTVGRPGHGNGARDVVRAVAPGDGSERVAGIHDHRVA*HCDGDFVSQALLLPVER 632
LHGCCSTVGRPGHGNGA DVVR VAPGDG ERVA +HDHRVA*H DGD V+ ALLLPVE
Sbjct: 299 LHGCCSTVGRPGHGNGAGDVVRTVAPGDGPERVADVHDHRVA*HRDGDLVA*ALLLPVEH 120
Query: 633 ELARGHRDIHAVRAGDRRLV 692
ELAR HRDIHA RA D LV
Sbjct: 119 ELARAHRDIHAGRADDLGLV 60
Score = 120 bits (256), Expect(4) = 1e-034
Identities = 54/84 (64%), Positives = 58/84 (69%)
Frame = -3 / +1
Query: 691 TSRRSPARTAWMXXXXXXXXXXXXXXRAWDTKSPSQCQATR*SWIPATRSDPSPGATART 512
TS RS AR AWM RA T+SPS+CQATR*SW ATRS PSPGAT RT
Sbjct: 61 TSPRSSARPAWMSR*ARASSCSTGSSRA*ATRSPSRCQATR*SWTSATRSGPSPGATVRT 240
Query: 511 TSRAPLP*PGRPTVEQQPCSRLML 440
TS APLP*PGRPTVEQQPC ++L
Sbjct: 241 TSPAPLP*PGRPTVEQQPCRLMLL 312
Score = 108 bits (230), Expect(3) = 2e-026
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = -1 / +2
Query: 696 GVPADDRQPVRRGCHGDPEQARVRREAAEPGIRNHHRSVRQPGDRGFQLLV 544
GV A DRQPVRRGCHG+PEQARVRREAAEP +R+HHR VRQPGDRG QLLV
Sbjct: 56 GVRAQDRQPVRRGCHGEPEQARVRREAAEPRLRDHHRGVRQPGDRGRQLLV 208
Score = 85.8 bits (181), Expect(3) = 8e-023
Identities = 38/45 (84%), Positives = 38/45 (84%)
Frame = +2 / -2
Query: 560 PRSPGCLTLRW*FRIPGSAASRRTRACSGSP*HPRRTGWRSSAGT 694
PRSPGCLT RW* R GSAASRRTRACSGSP*HPRRTG RS A T
Sbjct: 192 PRSPGCLTPRW*SRSLGSAASRRTRACSGSP*HPRRTG*RSWART 58
Score = 34.5 bits (69), Expect(4) = 1e-034
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / +1
Query: 441 CCYCLPLWEEGQGHEPMRSEISTPPACHRNN 349
CCY L LWEE QGH+ S P R N
Sbjct: 316 CCYWLLLWEEEQGHQIRDLHASCLPLFTRLN 408
Score = 31.8 bits (63), Expect(6) = 1e-055
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +2
Query: 489 DLAVQRWSSSHV 454
DLAVQRWSSSHV
Sbjct: 263 DLAVQRWSSSHV 298
Score = 31.3 bits (62), Expect(3) = 8e-023
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / -2
Query: 452 TTWLLLHRWTA 484
+TWLLLHRWTA
Sbjct: 300 STWLLLHRWTA 268
Score = 30.4 bits (60), Expect(6) = 1e-055
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -3 / +1
Query: 394 HEIRNLHASCLP 359
H+IR+LHASCLP
Sbjct: 355 HQIRDLHASCLP 390
Score = 30.4 bits (60), Expect(6) = 1e-055
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 442 LLLLSTAVGRRSGP 401
LLLL+TAVGRR+GP
Sbjct: 315 LLLLATAVGRRTGP 356
Score = 28.6 bits (56), Expect(3) = 2e-026
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / +3
Query: 407 RAMSP*DPKSPRLLPAI 357
R P DP+SPR++PAI
Sbjct: 342 RRTGPSDPRSPRIMPAI 392
Score = 28.6 bits (56), Expect(3) = 8e-023
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3 / -3
Query: 360 GRQEAWRFRISWAHGPDLLPTAVDSSNSISLLHGC 464
GR +AWR RI W + +NSISL C
Sbjct: 389 GRHDAWRSRI*WPCSSSHSSSQ*QQANSISLHGCC 285
Score = 27.2 bits (53), Expect(6) = 1e-055
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +3
Query: 353 IISSTEPRNNSAAP 312
I+ ST PRNNSAAP
Sbjct: 390 IVYST*PRNNSAAP 431
Score = 27.2 bits (53), Expect(4) = 4e-046
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / -2
Query: 397 LMALTFFPQR*TVAT 441
LMAL FFPQ+* VAT
Sbjct: 360 LMALFFFPQQ*PVAT 316
Score = 26.7 bits (52), Expect(4) = 1e-034
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +1
Query: 349 FPRLNHAIIQLP 314
F RLNH IIQLP
Sbjct: 394 FTRLNHGIIQLP 429
Score = 25.8 bits (50), Expect(3) = 1e-039
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / -1
Query: 402 GPDLLPTAVDSSN 440
GP LLPTAV SSN
Sbjct: 355 GPVLLPTAVASSN 317
Score = 24.0 bits (46), Expect(3) = 1e-039
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1 / -1
Query: 358 MAGRRRGDFGSHGLMAL 408
MAG RGD GS G + L
Sbjct: 391 MAGMMRGDLGSDGPVLL 341
Score = 23.5 bits (45), Expect(3) = 2e-026
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / +2
Query: 345 LD*TTQ*FSCP 313
LD TT+*FSCP
Sbjct: 398 LDLTTE*FSCP 430
Score = 23.5 bits (45), Expect(4) = 4e-046
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 359 WQAGGVEISDLM 394
WQA VEISDLM
Sbjct: 390 WQA*CVEISDLM 355
Score = 23.5 bits (45), Expect(4) = 4e-046
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / -2
Query: 213 LQAANHIRCSNQPT 254
LQAANHI QPT
Sbjct: 504 LQAANHISTLLQPT 463
Score = 22.1 bits (42), Expect(4) = 1e-034
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1 / +3
Query: 249 VGWSSVCDWLLA 214
VG +CDWLLA
Sbjct: 468 VGVVYLCDWLLA 503
Score = 22.1 bits (42), Expect(6) = 1e-055
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / +2
Query: 253 VGWLEQRM*LAAC 215
VGW M*LAAC
Sbjct: 464 VGWSSVLM*LAAC 502
>gb|CD207350.1|CD207350 HS1_65_A10.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_65_A10_A012 3', mRNA sequence
Length = 573
Score = 168 bits (361), Expect(4) = 3e-046
Identities = 72/80 (90%), Positives = 74/80 (92%)
Frame = +1 / -3
Query: 454 YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*LESTITGLPDTAMVISYPRLCCFPSNA 633
YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*L STITGLPDTAMVIS PRLCCFPSN
Sbjct: 283 YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*LTSTITGLPDTAMVIS*PRLCCFPSNT 104
Query: 634 SLLGVTVTSTPYGLAIVGWY 693
SLLG+TVTSTP GL I+G Y
Sbjct: 103 SLLGLTVTSTPDGLTILGSY 44
Score = 167 bits (359), Expect(6) = 1e-055
Identities = 68/75 (90%), Positives = 70/75 (93%)
Frame = -2 / +3
Query: 692 YQPTIASPYGVDVTVTPSKLAFDGKQQSLGYEITIAVSGNPVIVDSSYSFGSITWSDGAH 513
Y+P I SP GVDVTV+PSKL FDGKQQSLGYEITIAVSGNPVIVD SYSFGSITWSDGAH
Sbjct: 45 YEPKIVSPSGVDVTVSPSKLVFDGKQQSLGYEITIAVSGNPVIVDVSYSFGSITWSDGAH 224
Query: 512 DVTSPIAVTWPSNGG 468
DVTSPIAVTWPSNGG
Sbjct: 225 DVTSPIAVTWPSNGG 269
Score = 155 bits (332), Expect(3) = 2e-039
Identities = 65/80 (81%), Positives = 67/80 (83%)
Frame = +3 / -2
Query: 453 LHGCCSTVGRPGHGNGARDVVRAVAPGDGSERVAGIHDHRVA*HCDGDFVSQALLLPVER 632
LHGCCSTVGRPGHGNGA DVVR VAPGDG ERVA +HDHRVA*H DGD V+ ALLLPVE
Sbjct: 284 LHGCCSTVGRPGHGNGAGDVVRTVAPGDGPERVADVHDHRVA*HRDGDLVA*ALLLPVEH 105
Query: 633 ELARGHRDIHAVRAGDRRLV 692
ELAR HRDIHA RA D LV
Sbjct: 104 ELARAHRDIHAGRADDLGLV 45
Score = 120 bits (256), Expect(4) = 1e-034
Identities = 54/84 (64%), Positives = 58/84 (69%)
Frame = -3 / +1
Query: 691 TSRRSPARTAWMXXXXXXXXXXXXXXRAWDTKSPSQCQATR*SWIPATRSDPSPGATART 512
TS RS AR AWM RA T+SPS+CQATR*SW ATRS PSPGAT RT
Sbjct: 46 TSPRSSARPAWMSR*ARASSCSTGSSRA*ATRSPSRCQATR*SWTSATRSGPSPGATVRT 225
Query: 511 TSRAPLP*PGRPTVEQQPCSRLML 440
TS APLP*PGRPTVEQQPC ++L
Sbjct: 226 TSPAPLP*PGRPTVEQQPCRLMLL 297
Score = 108 bits (230), Expect(3) = 2e-026
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = -1 / +2
Query: 696 GVPADDRQPVRRGCHGDPEQARVRREAAEPGIRNHHRSVRQPGDRGFQLLV 544
GV A DRQPVRRGCHG+PEQARVRREAAEP +R+HHR VRQPGDRG QLLV
Sbjct: 41 GVRAQDRQPVRRGCHGEPEQARVRREAAEPRLRDHHRGVRQPGDRGRQLLV 193
Score = 85.8 bits (181), Expect(3) = 8e-023
Identities = 38/45 (84%), Positives = 38/45 (84%)
Frame = +2 / -1
Query: 560 PRSPGCLTLRW*FRIPGSAASRRTRACSGSP*HPRRTGWRSSAGT 694
PRSPGCLT RW* R GSAASRRTRACSGSP*HPRRTG RS A T
Sbjct: 177 PRSPGCLTPRW*SRSLGSAASRRTRACSGSP*HPRRTG*RSWART 43
Score = 34.5 bits (69), Expect(4) = 1e-034
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / +1
Query: 441 CCYCLPLWEEGQGHEPMRSEISTPPACHRNN 349
CCY L LWEE QGH+ S P R N
Sbjct: 301 CCYWLLLWEEEQGHQIRDLHASCLPLFTRLN 393
Score = 31.8 bits (63), Expect(6) = 1e-055
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +2
Query: 489 DLAVQRWSSSHV 454
DLAVQRWSSSHV
Sbjct: 248 DLAVQRWSSSHV 283
Score = 31.3 bits (62), Expect(3) = 8e-023
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / -1
Query: 452 TTWLLLHRWTA 484
+TWLLLHRWTA
Sbjct: 285 STWLLLHRWTA 253
Score = 30.4 bits (60), Expect(6) = 1e-055
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -3 / +1
Query: 394 HEIRNLHASCLP 359
H+IR+LHASCLP
Sbjct: 340 HQIRDLHASCLP 375
Score = 30.4 bits (60), Expect(6) = 1e-055
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 442 LLLLSTAVGRRSGP 401
LLLL+TAVGRR+GP
Sbjct: 300 LLLLATAVGRRTGP 341
Score = 28.6 bits (56), Expect(3) = 2e-026
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / +3
Query: 407 RAMSP*DPKSPRLLPAI 357
R P DP+SPR++PAI
Sbjct: 327 RRTGPSDPRSPRIMPAI 377
Score = 28.6 bits (56), Expect(3) = 8e-023
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3 / -2
Query: 360 GRQEAWRFRISWAHGPDLLPTAVDSSNSISLLHGC 464
GR +AWR RI W + +NSISL C
Sbjct: 374 GRHDAWRSRI*WPCSSSHSSSQ*QQANSISLHGCC 270
Score = 27.2 bits (53), Expect(6) = 1e-055
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +3
Query: 353 IISSTEPRNNSAAP 312
I+ ST PRNNSAAP
Sbjct: 375 IVYST*PRNNSAAP 416
Score = 27.2 bits (53), Expect(4) = 3e-046
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / -1
Query: 397 LMALTFFPQR*TVAT 441
LMAL FFPQ+* VAT
Sbjct: 345 LMALFFFPQQ*PVAT 301
Score = 26.7 bits (52), Expect(4) = 1e-034
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +1
Query: 349 FPRLNHAIIQLP 314
F RLNH IIQLP
Sbjct: 379 FTRLNHGIIQLP 414
Score = 25.8 bits (50), Expect(3) = 2e-039
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / -3
Query: 402 GPDLLPTAVDSSN 440
GP LLPTAV SSN
Sbjct: 340 GPVLLPTAVASSN 302
Score = 24.0 bits (46), Expect(4) = 3e-046
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1 / -3
Query: 358 MAGRRRGDFGSHGLMAL 408
MAG RGD GS G + L
Sbjct: 376 MAGMMRGDLGSDGPVLL 326
Score = 23.5 bits (45), Expect(3) = 2e-026
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / +2
Query: 345 LD*TTQ*FSCP 313
LD TT+*FSCP
Sbjct: 383 LDLTTE*FSCP 415
Score = 23.5 bits (45), Expect(3) = 2e-039
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -1
Query: 359 WQAGGVEISDLM 394
WQA VEISDLM
Sbjct: 375 WQA*CVEISDLM 340
Score = 23.5 bits (45), Expect(4) = 3e-046
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / -1
Query: 213 LQAANHIRCSNQPT 254
LQAANHI QPT
Sbjct: 489 LQAANHISTLLQPT 448
Score = 22.1 bits (42), Expect(4) = 1e-034
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1 / +3
Query: 249 VGWSSVCDWLLA 214
VG +CDWLLA
Sbjct: 453 VGVVYLCDWLLA 488
Score = 22.1 bits (42), Expect(6) = 1e-055
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / +2
Query: 253 VGWLEQRM*LAAC 215
VGW M*LAAC
Sbjct: 449 VGWSSVLM*LAAC 487
>gb|CD423742.1|CD423742 SA1_1_G06.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_1_G06_A002 3', mRNA sequence
Length = 582
Score = 168 bits (361), Expect(4) = 3e-046
Identities = 72/80 (90%), Positives = 74/80 (92%)
Frame = +1 / -3
Query: 454 YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*LESTITGLPDTAMVISYPRLCCFPSNA 633
YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*L STITGLPDTAMVIS PRLCCFPSN
Sbjct: 292 YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*LTSTITGLPDTAMVIS*PRLCCFPSNT 113
Query: 634 SLLGVTVTSTPYGLAIVGWY 693
SLLG+TVTSTP GL I+G Y
Sbjct: 112 SLLGLTVTSTPDGLTILGSY 53
Score = 167 bits (359), Expect(6) = 1e-055
Identities = 68/75 (90%), Positives = 70/75 (93%)
Frame = -2 / +3
Query: 692 YQPTIASPYGVDVTVTPSKLAFDGKQQSLGYEITIAVSGNPVIVDSSYSFGSITWSDGAH 513
Y+P I SP GVDVTV+PSKL FDGKQQSLGYEITIAVSGNPVIVD SYSFGSITWSDGAH
Sbjct: 54 YEPKIVSPSGVDVTVSPSKLVFDGKQQSLGYEITIAVSGNPVIVDVSYSFGSITWSDGAH 233
Query: 512 DVTSPIAVTWPSNGG 468
DVTSPIAVTWPSNGG
Sbjct: 234 DVTSPIAVTWPSNGG 278
Score = 155 bits (332), Expect(3) = 2e-039
Identities = 65/80 (81%), Positives = 67/80 (83%)
Frame = +3 / -2
Query: 453 LHGCCSTVGRPGHGNGARDVVRAVAPGDGSERVAGIHDHRVA*HCDGDFVSQALLLPVER 632
LHGCCSTVGRPGHGNGA DVVR VAPGDG ERVA +HDHRVA*H DGD V+ ALLLPVE
Sbjct: 293 LHGCCSTVGRPGHGNGAGDVVRTVAPGDGPERVADVHDHRVA*HRDGDLVA*ALLLPVEH 114
Query: 633 ELARGHRDIHAVRAGDRRLV 692
ELAR HRDIHA RA D LV
Sbjct: 113 ELARAHRDIHAGRADDLGLV 54
Score = 120 bits (256), Expect(4) = 1e-034
Identities = 54/84 (64%), Positives = 58/84 (69%)
Frame = -3 / +1
Query: 691 TSRRSPARTAWMXXXXXXXXXXXXXXRAWDTKSPSQCQATR*SWIPATRSDPSPGATART 512
TS RS AR AWM RA T+SPS+CQATR*SW ATRS PSPGAT RT
Sbjct: 55 TSPRSSARPAWMSR*ARASSCSTGSSRA*ATRSPSRCQATR*SWTSATRSGPSPGATVRT 234
Query: 511 TSRAPLP*PGRPTVEQQPCSRLML 440
TS APLP*PGRPTVEQQPC ++L
Sbjct: 235 TSPAPLP*PGRPTVEQQPCRLMLL 306
Score = 108 bits (230), Expect(3) = 2e-026
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = -1 / +2
Query: 696 GVPADDRQPVRRGCHGDPEQARVRREAAEPGIRNHHRSVRQPGDRGFQLLV 544
GV A DRQPVRRGCHG+PEQARVRREAAEP +R+HHR VRQPGDRG QLLV
Sbjct: 50 GVRAQDRQPVRRGCHGEPEQARVRREAAEPRLRDHHRGVRQPGDRGRQLLV 202
Score = 85.8 bits (181), Expect(3) = 8e-023
Identities = 38/45 (84%), Positives = 38/45 (84%)
Frame = +2 / -1
Query: 560 PRSPGCLTLRW*FRIPGSAASRRTRACSGSP*HPRRTGWRSSAGT 694
PRSPGCLT RW* R GSAASRRTRACSGSP*HPRRTG RS A T
Sbjct: 186 PRSPGCLTPRW*SRSLGSAASRRTRACSGSP*HPRRTG*RSWART 52
Score = 34.5 bits (69), Expect(4) = 1e-034
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / +1
Query: 441 CCYCLPLWEEGQGHEPMRSEISTPPACHRNN 349
CCY L LWEE QGH+ S P R N
Sbjct: 310 CCYWLLLWEEEQGHQIRDLHASCLPLFTRLN 402
Score = 31.8 bits (63), Expect(6) = 1e-055
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +2
Query: 489 DLAVQRWSSSHV 454
DLAVQRWSSSHV
Sbjct: 257 DLAVQRWSSSHV 292
Score = 31.3 bits (62), Expect(3) = 8e-023
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / -1
Query: 452 TTWLLLHRWTA 484
+TWLLLHRWTA
Sbjct: 294 STWLLLHRWTA 262
Score = 30.4 bits (60), Expect(6) = 1e-055
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -3 / +1
Query: 394 HEIRNLHASCLP 359
H+IR+LHASCLP
Sbjct: 349 HQIRDLHASCLP 384
Score = 30.4 bits (60), Expect(6) = 1e-055
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 442 LLLLSTAVGRRSGP 401
LLLL+TAVGRR+GP
Sbjct: 309 LLLLATAVGRRTGP 350
Score = 28.6 bits (56), Expect(3) = 2e-026
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / +3
Query: 407 RAMSP*DPKSPRLLPAI 357
R P DP+SPR++PAI
Sbjct: 336 RRTGPSDPRSPRIMPAI 386
Score = 28.6 bits (56), Expect(3) = 8e-023
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3 / -2
Query: 360 GRQEAWRFRISWAHGPDLLPTAVDSSNSISLLHGC 464
GR +AWR RI W + +NSISL C
Sbjct: 383 GRHDAWRSRI*WPCSSSHSSSQ*QQANSISLHGCC 279
Score = 27.2 bits (53), Expect(6) = 1e-055
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +3
Query: 353 IISSTEPRNNSAAP 312
I+ ST PRNNSAAP
Sbjct: 384 IVYST*PRNNSAAP 425
Score = 27.2 bits (53), Expect(4) = 3e-046
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / -1
Query: 397 LMALTFFPQR*TVAT 441
LMAL FFPQ+* VAT
Sbjct: 354 LMALFFFPQQ*PVAT 310
Score = 26.7 bits (52), Expect(4) = 1e-034
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +1
Query: 349 FPRLNHAIIQLP 314
F RLNH IIQLP
Sbjct: 388 FTRLNHGIIQLP 423
Score = 25.8 bits (50), Expect(3) = 2e-039
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / -3
Query: 402 GPDLLPTAVDSSN 440
GP LLPTAV SSN
Sbjct: 349 GPVLLPTAVASSN 311
Score = 24.0 bits (46), Expect(4) = 3e-046
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1 / -3
Query: 358 MAGRRRGDFGSHGLMAL 408
MAG RGD GS G + L
Sbjct: 385 MAGMMRGDLGSDGPVLL 335
Score = 23.5 bits (45), Expect(3) = 2e-026
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / +2
Query: 345 LD*TTQ*FSCP 313
LD TT+*FSCP
Sbjct: 392 LDLTTE*FSCP 424
Score = 23.5 bits (45), Expect(3) = 2e-039
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -1
Query: 359 WQAGGVEISDLM 394
WQA VEISDLM
Sbjct: 384 WQA*CVEISDLM 349
Score = 23.5 bits (45), Expect(4) = 3e-046
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / -1
Query: 213 LQAANHIRCSNQPT 254
LQAANHI QPT
Sbjct: 498 LQAANHISTLLQPT 457
Score = 22.1 bits (42), Expect(4) = 1e-034
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1 / +3
Query: 249 VGWSSVCDWLLA 214
VG +CDWLLA
Sbjct: 462 VGVVYLCDWLLA 497
Score = 22.1 bits (42), Expect(6) = 1e-055
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / +2
Query: 253 VGWLEQRM*LAAC 215
VGW M*LAAC
Sbjct: 458 VGWSSVLM*LAAC 496
>gb|CW068657.1|CW068657 104_317_10525236_115_30116 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10525236, DNA
sequence
Length = 422
Score = 166 bits (357), Expect(3) = 5e-044
Identities = 71/78 (91%), Positives = 73/78 (93%)
Frame = +1 / +3
Query: 454 YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*LESTITGLPDTAMVISYPRLCCFPSNA 633
YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*L STITGLPDTAMVIS PRLCCFPSN
Sbjct: 189 YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*LTSTITGLPDTAMVIS*PRLCCFPSNT 368
Query: 634 SLLGVTVTSTPYGLAIVG 687
SLLG+TVTSTP GL I+G
Sbjct: 369 SLLGLTVTSTPDGLTILG 422
Score = 163 bits (350), Expect(5) = 3e-053
Identities = 67/73 (91%), Positives = 68/73 (93%)
Frame = -2 / -2
Query: 686 PTIASPYGVDVTVTPSKLAFDGKQQSLGYEITIAVSGNPVIVDSSYSFGSITWSDGAHDV 507
P I SP GVDVTV+PSKL FDGKQQSLGYEITIAVSGNPVIVD SYSFGSITWSDGAHDV
Sbjct: 421 PKIVSPSGVDVTVSPSKLVFDGKQQSLGYEITIAVSGNPVIVDVSYSFGSITWSDGAHDV 242
Query: 506 TSPIAVTWPSNGG 468
TSPIAVTWPSNGG
Sbjct: 241 TSPIAVTWPSNGG 203
Score = 153 bits (328), Expect(3) = 3e-039
Identities = 63/76 (82%), Positives = 65/76 (85%)
Frame = +3 / +2
Query: 453 LHGCCSTVGRPGHGNGARDVVRAVAPGDGSERVAGIHDHRVA*HCDGDFVSQALLLPVER 632
LHGCCSTVGRPGHGNGA DVVR VAPGDG ERVA +HDHRVA*H DGD V+ ALLLPVE
Sbjct: 188 LHGCCSTVGRPGHGNGAGDVVRTVAPGDGPERVADVHDHRVA*HRDGDLVA*ALLLPVEH 367
Query: 633 ELARGHRDIHAVRAGD 680
ELAR HRDIHA RA D
Sbjct: 368 ELARAHRDIHAGRADD 415
Score = 116 bits (249), Expect(3) = 2e-032
Identities = 52/81 (64%), Positives = 56/81 (69%)
Frame = -3 / -3
Query: 682 RSPARTAWMXXXXXXXXXXXXXXRAWDTKSPSQCQATR*SWIPATRSDPSPGATARTTSR 503
RS AR AWM RA T+SPS+CQATR*SW ATRS PSPGAT RTTS
Sbjct: 417 RSSARPAWMSR*ARASSCSTGSSRA*ATRSPSRCQATR*SWTSATRSGPSPGATVRTTSP 238
Query: 502 APLP*PGRPTVEQQPCSRLML 440
APLP*PGRPTVEQQPC ++L
Sbjct: 237 APLP*PGRPTVEQQPCRLMLL 175
Score = 104 bits (222), Expect(3) = 9e-026
Identities = 41/48 (85%), Positives = 44/48 (91%)
Frame = -1 / -1
Query: 687 ADDRQPVRRGCHGDPEQARVRREAAEPGIRNHHRSVRQPGDRGFQLLV 544
A DRQPVRRGCHG+PEQARVRREAAEP +R+HHR VRQPGDRG QLLV
Sbjct: 422 AQDRQPVRRGCHGEPEQARVRREAAEPRLRDHHRGVRQPGDRGRQLLV 279
Score = 84.0 bits (177), Expect(3) = 3e-022
Identities = 36/41 (87%), Positives = 36/41 (87%)
Frame = +2 / +1
Query: 560 PRSPGCLTLRW*FRIPGSAASRRTRACSGSP*HPRRTGWRS 682
PRSPGCLT RW* R GSAASRRTRACSGSP*HPRRTG RS
Sbjct: 295 PRSPGCLTPRW*SRSLGSAASRRTRACSGSP*HPRRTG*RS 417
Score = 34.5 bits (69), Expect(3) = 2e-032
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / -3
Query: 441 CCYCLPLWEEGQGHEPMRSEISTPPACHRNN 349
CCY L LWEE QGH+ S P R N
Sbjct: 171 CCYWLLLWEEEQGHQIRDLHASCLPLFTRLN 79
Score = 31.8 bits (63), Expect(5) = 3e-053
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 489 DLAVQRWSSSHV 454
DLAVQRWSSSHV
Sbjct: 224 DLAVQRWSSSHV 189
Score = 31.3 bits (62), Expect(3) = 3e-022
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / +1
Query: 452 TTWLLLHRWTA 484
+TWLLLHRWTA
Sbjct: 187 STWLLLHRWTA 219
Score = 30.4 bits (60), Expect(5) = 3e-053
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -3 / -3
Query: 394 HEIRNLHASCLP 359
H+IR+LHASCLP
Sbjct: 132 HQIRDLHASCLP 97
Score = 30.4 bits (60), Expect(5) = 3e-053
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / -2
Query: 442 LLLLSTAVGRRSGP 401
LLLL+TAVGRR+GP
Sbjct: 172 LLLLATAVGRRTGP 131
Score = 28.6 bits (56), Expect(3) = 9e-026
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / -2
Query: 407 RAMSP*DPKSPRLLPAI 357
R P DP+SPR++PAI
Sbjct: 145 RRTGPSDPRSPRIMPAI 95
Score = 28.6 bits (56), Expect(3) = 3e-022
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3 / +2
Query: 360 GRQEAWRFRISWAHGPDLLPTAVDSSNSISLLHGC 464
GR +AWR RI W + +NSISL C
Sbjct: 98 GRHDAWRSRI*WPCSSSHSSSQ*QQANSISLHGCC 202
Score = 27.2 bits (53), Expect(5) = 3e-053
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -2
Query: 353 IISSTEPRNNSAAP 312
I+ ST PRNNSAAP
Sbjct: 97 IVYST*PRNNSAAP 56
Score = 27.2 bits (53), Expect(3) = 5e-044
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / +1
Query: 397 LMALTFFPQR*TVAT 441
LMAL FFPQ+* VAT
Sbjct: 127 LMALFFFPQQ*PVAT 171
Score = 26.7 bits (52), Expect(3) = 2e-032
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 349 FPRLNHAIIQLP 314
F RLNH IIQLP
Sbjct: 93 FTRLNHGIIQLP 58
Score = 25.8 bits (50), Expect(3) = 3e-039
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / +3
Query: 402 GPDLLPTAVDSSN 440
GP LLPTAV SSN
Sbjct: 132 GPVLLPTAVASSN 170
Score = 24.0 bits (46), Expect(3) = 5e-044
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1 / +3
Query: 358 MAGRRRGDFGSHGLMAL 408
MAG RGD GS G + L
Sbjct: 96 MAGMMRGDLGSDGPVLL 146
Score = 23.5 bits (45), Expect(3) = 9e-026
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -1
Query: 345 LD*TTQ*FSCP 313
LD TT+*FSCP
Sbjct: 89 LDLTTE*FSCP 57
Score = 23.5 bits (45), Expect(3) = 3e-039
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / +1
Query: 359 WQAGGVEISDLM 394
WQA VEISDLM
Sbjct: 97 WQA*CVEISDLM 132
>gb|CD461585.1|CD461585 SA1_33_H10.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_33_H10_A002 3', mRNA sequence
Length = 582
Score = 168 bits (361), Expect(4) = 4e-046
Identities = 72/80 (90%), Positives = 74/80 (92%)
Frame = +1 / -2
Query: 454 YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*LESTITGLPDTAMVISYPRLCCFPSNA 633
YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*L STITGLPDTAMVIS PRLCCFPSN
Sbjct: 302 YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*LTSTITGLPDTAMVIS*PRLCCFPSNT 123
Query: 634 SLLGVTVTSTPYGLAIVGWY 693
SLLG+TVTSTP GL I+G Y
Sbjct: 122 SLLGLTVTSTPDGLTILGSY 63
Score = 167 bits (359), Expect(5) = 3e-051
Identities = 68/75 (90%), Positives = 70/75 (93%)
Frame = -2 / +1
Query: 692 YQPTIASPYGVDVTVTPSKLAFDGKQQSLGYEITIAVSGNPVIVDSSYSFGSITWSDGAH 513
Y+P I SP GVDVTV+PSKL FDGKQQSLGYEITIAVSGNPVIVD SYSFGSITWSDGAH
Sbjct: 64 YEPKIVSPSGVDVTVSPSKLVFDGKQQSLGYEITIAVSGNPVIVDVSYSFGSITWSDGAH 243
Query: 512 DVTSPIAVTWPSNGG 468
DVTSPIAVTWPSNGG
Sbjct: 244 DVTSPIAVTWPSNGG 288
Score = 155 bits (332), Expect(3) = 1e-039
Identities = 65/80 (81%), Positives = 67/80 (83%)
Frame = +3 / -1
Query: 453 LHGCCSTVGRPGHGNGARDVVRAVAPGDGSERVAGIHDHRVA*HCDGDFVSQALLLPVER 632
LHGCCSTVGRPGHGNGA DVVR VAPGDG ERVA +HDHRVA*H DGD V+ ALLLPVE
Sbjct: 303 LHGCCSTVGRPGHGNGAGDVVRTVAPGDGPERVADVHDHRVA*HRDGDLVA*ALLLPVEH 124
Query: 633 ELARGHRDIHAVRAGDRRLV 692
ELAR HRDIHA RA D LV
Sbjct: 123 ELARAHRDIHAGRADDLGLV 64
Score = 120 bits (256), Expect(3) = 1e-030
Identities = 54/84 (64%), Positives = 58/84 (69%)
Frame = -3 / +2
Query: 691 TSRRSPARTAWMXXXXXXXXXXXXXXRAWDTKSPSQCQATR*SWIPATRSDPSPGATART 512
TS RS AR AWM RA T+SPS+CQATR*SW ATRS PSPGAT RT
Sbjct: 65 TSPRSSARPAWMSR*ARASSCSTGSSRA*ATRSPSRCQATR*SWTSATRSGPSPGATVRT 244
Query: 511 TSRAPLP*PGRPTVEQQPCSRLML 440
TS APLP*PGRPTVEQQPC ++L
Sbjct: 245 TSPAPLP*PGRPTVEQQPCRLMLL 316
Score = 108 bits (230), Expect(5) = 3e-035
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = -1 / +3
Query: 696 GVPADDRQPVRRGCHGDPEQARVRREAAEPGIRNHHRSVRQPGDRGFQLLV 544
GV A DRQPVRRGCHG+PEQARVRREAAEP +R+HHR VRQPGDRG QLLV
Sbjct: 60 GVRAQDRQPVRRGCHGEPEQARVRREAAEPRLRDHHRGVRQPGDRGRQLLV 212
Score = 85.8 bits (181), Expect(3) = 8e-023
Identities = 38/45 (84%), Positives = 38/45 (84%)
Frame = +2 / -3
Query: 560 PRSPGCLTLRW*FRIPGSAASRRTRACSGSP*HPRRTGWRSSAGT 694
PRSPGCLT RW* R GSAASRRTRACSGSP*HPRRTG RS A T
Sbjct: 196 PRSPGCLTPRW*SRSLGSAASRRTRACSGSP*HPRRTG*RSWART 62
Score = 34.5 bits (69), Expect(5) = 3e-035
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / +2
Query: 441 CCYCLPLWEEGQGHEPMRSEISTPPACHRNN 349
CCY L LWEE QGH+ S P R N
Sbjct: 320 CCYWLLLWEEEQGHQIRDLHASCLPLFTRLN 412
Score = 31.8 bits (63), Expect(5) = 3e-035
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +3
Query: 489 DLAVQRWSSSHV 454
DLAVQRWSSSHV
Sbjct: 267 DLAVQRWSSSHV 302
Score = 31.3 bits (62), Expect(3) = 8e-023
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / -3
Query: 452 TTWLLLHRWTA 484
+TWLLLHRWTA
Sbjct: 304 STWLLLHRWTA 272
Score = 30.4 bits (60), Expect(5) = 3e-051
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -3 / +2
Query: 394 HEIRNLHASCLP 359
H+IR+LHASCLP
Sbjct: 359 HQIRDLHASCLP 394
Score = 30.4 bits (60), Expect(5) = 3e-051
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +1
Query: 442 LLLLSTAVGRRSGP 401
LLLL+TAVGRR+GP
Sbjct: 319 LLLLATAVGRRTGP 360
Score = 28.6 bits (56), Expect(3) = 1e-030
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / +1
Query: 407 RAMSP*DPKSPRLLPAI 357
R P DP+SPR++PAI
Sbjct: 346 RRTGPSDPRSPRIMPAI 396
Score = 28.6 bits (56), Expect(3) = 8e-023
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3 / -1
Query: 360 GRQEAWRFRISWAHGPDLLPTAVDSSNSISLLHGC 464
GR +AWR RI W + +NSISL C
Sbjct: 393 GRHDAWRSRI*WPCSSSHSSSQ*QQANSISLHGCC 289
Score = 27.2 bits (53), Expect(5) = 3e-051
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +1
Query: 353 IISSTEPRNNSAAP 312
I+ ST PRNNSAAP
Sbjct: 394 IVYST*PRNNSAAP 435
Score = 27.2 bits (53), Expect(4) = 4e-046
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / -3
Query: 397 LMALTFFPQR*TVAT 441
LMAL FFPQ+* VAT
Sbjct: 364 LMALFFFPQQ*PVAT 320
Score = 26.7 bits (52), Expect(5) = 3e-035
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +2
Query: 349 FPRLNHAIIQLP 314
F RLNH IIQLP
Sbjct: 398 FTRLNHGIIQLP 433
Score = 25.8 bits (50), Expect(3) = 1e-039
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / -2
Query: 402 GPDLLPTAVDSSN 440
GP LLPTAV SSN
Sbjct: 359 GPVLLPTAVASSN 321
Score = 24.0 bits (46), Expect(3) = 1e-039
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1 / -2
Query: 358 MAGRRRGDFGSHGLMAL 408
MAG RGD GS G + L
Sbjct: 395 MAGMMRGDLGSDGPVLL 345
Score = 23.5 bits (45), Expect(3) = 1e-030
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / +3
Query: 345 LD*TTQ*FSCP 313
LD TT+*FSCP
Sbjct: 402 LDLTTE*FSCP 434
Score = 23.5 bits (45), Expect(4) = 4e-046
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -3
Query: 359 WQAGGVEISDLM 394
WQA VEISDLM
Sbjct: 394 WQA*CVEISDLM 359
Score = 23.5 bits (45), Expect(4) = 4e-046
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / -3
Query: 213 LQAANHIRCSNQPT 254
LQAANHI QPT
Sbjct: 508 LQAANHISTLLQPT 467
Score = 22.1 bits (42), Expect(5) = 3e-035
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1 / +1
Query: 249 VGWSSVCDWLLA 214
VG +CDWLLA
Sbjct: 472 VGVVYLCDWLLA 507
Score = 22.1 bits (42), Expect(5) = 3e-051
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / +3
Query: 253 VGWLEQRM*LAAC 215
VGW M*LAAC
Sbjct: 468 VGWSSVLM*LAAC 506
>gb|CF072067.1|CF072067 FE1_20_D03.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_20_D03_A002 3', mRNA sequence
Length = 431
Score = 165 bits (355), Expect(3) = 1e-043
Identities = 71/80 (88%), Positives = 73/80 (91%)
Frame = +1 / -1
Query: 454 YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*LESTITGLPDTAMVISYPRLCCFPSNA 633
YMAAAPPLDGQVTAMGLVTSCAPSLQ MDPNE*L STITGLPDTAMVIS PRLCCFPSN
Sbjct: 302 YMAAAPPLDGQVTAMGLVTSCAPSLQEMDPNE*LTSTITGLPDTAMVIS*PRLCCFPSNT 123
Query: 634 SLLGVTVTSTPYGLAIVGWY 693
SLLG+TVTSTP GL I+G Y
Sbjct: 122 SLLGLTVTSTPDGLTILGSY 63
Score = 165 bits (355), Expect(3) = 1e-046
Identities = 67/75 (89%), Positives = 70/75 (93%)
Frame = -2 / +1
Query: 692 YQPTIASPYGVDVTVTPSKLAFDGKQQSLGYEITIAVSGNPVIVDSSYSFGSITWSDGAH 513
Y+P I SP GVDVTV+PSKL FDGKQQSLGYEITIAVSGNPVIVD SYSFGSI+WSDGAH
Sbjct: 64 YEPKIVSPSGVDVTVSPSKLVFDGKQQSLGYEITIAVSGNPVIVDVSYSFGSISWSDGAH 243
Query: 512 DVTSPIAVTWPSNGG 468
DVTSPIAVTWPSNGG
Sbjct: 244 DVTSPIAVTWPSNGG 288
Score = 155 bits (332), Expect(3) = 7e-040
Identities = 65/80 (81%), Positives = 67/80 (83%)
Frame = +3 / -3
Query: 453 LHGCCSTVGRPGHGNGARDVVRAVAPGDGSERVAGIHDHRVA*HCDGDFVSQALLLPVER 632
LHGCCSTVGRPGHGNGA DVVR VAPGDG ERVA +HDHRVA*H DGD V+ ALLLPVE
Sbjct: 303 LHGCCSTVGRPGHGNGAGDVVRTVAPGDGPERVADVHDHRVA*HRDGDLVA*ALLLPVEH 124
Query: 633 ELARGHRDIHAVRAGDRRLV 692
ELAR HRDIHA RA D LV
Sbjct: 123 ELARAHRDIHAGRADDLGLV 64
Score = 120 bits (256), Expect(2) = 6e-029
Identities = 54/84 (64%), Positives = 58/84 (69%)
Frame = -3 / +2
Query: 691 TSRRSPARTAWMXXXXXXXXXXXXXXRAWDTKSPSQCQATR*SWIPATRSDPSPGATART 512
TS RS AR AWM RA T+SPS+CQATR*SW ATRS PSPGAT RT
Sbjct: 65 TSPRSSARPAWMSR*ARASSCSTGSSRA*ATRSPSRCQATR*SWTSATRSGPSPGATVRT 244
Query: 511 TSRAPLP*PGRPTVEQQPCSRLML 440
TS APLP*PGRPTVEQQPC ++L
Sbjct: 245 TSPAPLP*PGRPTVEQQPCRLMLL 316
Score = 108 bits (230), Expect(3) = 6e-031
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = -1 / +3
Query: 696 GVPADDRQPVRRGCHGDPEQARVRREAAEPGIRNHHRSVRQPGDRGFQLLV 544
GV A DRQPVRRGCHG+PEQARVRREAAEP +R+HHR VRQPGDRG QLLV
Sbjct: 60 GVRAQDRQPVRRGCHGEPEQARVRREAAEPRLRDHHRGVRQPGDRGRQLLV 212
Score = 85.8 bits (181), Expect(3) = 8e-023
Identities = 38/45 (84%), Positives = 38/45 (84%)
Frame = +2 / -2
Query: 560 PRSPGCLTLRW*FRIPGSAASRRTRACSGSP*HPRRTGWRSSAGT 694
PRSPGCLT RW* R GSAASRRTRACSGSP*HPRRTG RS A T
Sbjct: 196 PRSPGCLTPRW*SRSLGSAASRRTRACSGSP*HPRRTG*RSWART 62
Score = 34.5 bits (69), Expect(3) = 6e-031
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / +2
Query: 441 CCYCLPLWEEGQGHEPMRSEISTPPACHRNN 349
CCY L LWEE QGH+ S P R N
Sbjct: 320 CCYWLLLWEEEQGHQIRDLHASCLPLFTRLN 412
Score = 31.8 bits (63), Expect(3) = 6e-031
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +3
Query: 489 DLAVQRWSSSHV 454
DLAVQRWSSSHV
Sbjct: 267 DLAVQRWSSSHV 302
Score = 31.3 bits (62), Expect(3) = 8e-023
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / -2
Query: 452 TTWLLLHRWTA 484
+TWLLLHRWTA
Sbjct: 304 STWLLLHRWTA 272
Score = 30.4 bits (60), Expect(3) = 1e-046
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -3 / +2
Query: 394 HEIRNLHASCLP 359
H+IR+LHASCLP
Sbjct: 359 HQIRDLHASCLP 394
Score = 30.4 bits (60), Expect(3) = 1e-046
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +1
Query: 442 LLLLSTAVGRRSGP 401
LLLL+TAVGRR+GP
Sbjct: 319 LLLLATAVGRRTGP 360
Score = 28.6 bits (56), Expect(2) = 6e-029
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / +1
Query: 407 RAMSP*DPKSPRLLPAI 357
R P DP+SPR++PAI
Sbjct: 346 RRTGPSDPRSPRIMPAI 396
Score = 28.6 bits (56), Expect(3) = 8e-023
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3 / -3
Query: 360 GRQEAWRFRISWAHGPDLLPTAVDSSNSISLLHGC 464
GR +AWR RI W + +NSISL C
Sbjct: 393 GRHDAWRSRI*WPCSSSHSSSQ*QQANSISLHGCC 289
Score = 27.2 bits (53), Expect(3) = 1e-043
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / -2
Query: 397 LMALTFFPQR*TVAT 441
LMAL FFPQ+* VAT
Sbjct: 364 LMALFFFPQQ*PVAT 320
Score = 25.8 bits (50), Expect(3) = 7e-040
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / -1
Query: 402 GPDLLPTAVDSSN 440
GP LLPTAV SSN
Sbjct: 359 GPVLLPTAVASSN 321
Score = 24.0 bits (46), Expect(3) = 7e-040
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1 / -1
Query: 358 MAGRRRGDFGSHGLMAL 408
MAG RGD GS G + L
Sbjct: 395 MAGMMRGDLGSDGPVLL 345
Score = 23.5 bits (45), Expect(3) = 1e-043
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 359 WQAGGVEISDLM 394
WQA VEISDLM
Sbjct: 394 WQA*CVEISDLM 359
>gb|CF757924.1|CF757924 DSAF1_25_A12.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_25_A12_A011 3', mRNA sequence
Length = 475
Score = 131 bits (280), Expect(4) = 3e-035
Identities = 55/57 (96%), Positives = 55/57 (96%)
Frame = +1 / -1
Query: 454 YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*LESTITGLPDTAMVISYPRLCCFP 624
YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*L STITGLPDTAMVIS PRLCCFP
Sbjct: 172 YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*LTSTITGLPDTAMVIS*PRLCCFP 2
Score = 126 bits (269), Expect(7) = 7e-046
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = -2 / +3
Query: 623 GKQQSLGYEITIAVSGNPVIVDSSYSFGSITWSDGAHDVTSPIAVTWPSNGG 468
GKQQSLGYEITIAVSGNPVIVD SYSFGSITWSDGAHDVTSPIAVTWPSNGG
Sbjct: 3 GKQQSLGYEITIAVSGNPVIVDVSYSFGSITWSDGAHDVTSPIAVTWPSNGG 158
Score = 119 bits (255), Expect(2) = 2e-028
Identities = 48/57 (84%), Positives = 50/57 (87%)
Frame = +3 / -3
Query: 453 LHGCCSTVGRPGHGNGARDVVRAVAPGDGSERVAGIHDHRVA*HCDGDFVSQALLLP 623
LHGCCSTVGRPGHGNGA DVVR VAPGDG ERVA +HDHRVA*H DGD V+ ALLLP
Sbjct: 173 LHGCCSTVGRPGHGNGAGDVVRTVAPGDGPERVADVHDHRVA*HRDGDLVA*ALLLP 3
Score = 105 bits (225), Expect(4) = 1e-030
Identities = 43/54 (79%), Positives = 47/54 (87%)
Frame = -3 / +1
Query: 601 TKSPSQCQATR*SWIPATRSDPSPGATARTTSRAPLP*PGRPTVEQQPCSRLML 440
T+SPS+CQATR*SW ATRS PSPGAT RTTS APLP*PGRPTVEQQPC ++L
Sbjct: 25 TRSPSRCQATR*SWTSATRSGPSPGATVRTTSPAPLP*PGRPTVEQQPCRLMLL 186
Score = 34.5 bits (69), Expect(4) = 1e-030
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / +1
Query: 441 CCYCLPLWEEGQGHEPMRSEISTPPACHRNN 349
CCY L LWEE QGH+ S P R N
Sbjct: 190 CCYWLLLWEEEQGHQIRDFHASCLPLFTRLN 282
Score = 31.8 bits (63), Expect(7) = 7e-046
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +2
Query: 489 DLAVQRWSSSHV 454
DLAVQRWSSSHV
Sbjct: 137 DLAVQRWSSSHV 172
Score = 30.4 bits (60), Expect(7) = 7e-046
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 442 LLLLSTAVGRRSGP 401
LLLL+TAVGRR+GP
Sbjct: 189 LLLLATAVGRRTGP 230
Score = 28.6 bits (56), Expect(7) = 7e-046
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / +1
Query: 394 HEIRNLHASCLP 359
H+IR+ HASCLP
Sbjct: 229 HQIRDFHASCLP 264
Score = 27.2 bits (53), Expect(7) = 7e-046
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +3
Query: 353 IISSTEPRNNSAAP 312
I+ ST PRNNSAAP
Sbjct: 264 IVYST*PRNNSAAP 305
Score = 27.2 bits (53), Expect(4) = 3e-035
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / -2
Query: 397 LMALTFFPQR*TVAT 441
LMAL FFPQ+* VAT
Sbjct: 234 LMALFFFPQQ*PVAT 190
Score = 27.2 bits (53), Expect(2) = 2e-028
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3 / -3
Query: 360 GRQEAWRFRISWAHGPDLLPTAVDSSNSISLLHGC 464
GR +AW+ RI W + +NSISL C
Sbjct: 263 GRHDAWKSRI*WPCSSSHSSSQ*QQANSISLHGCC 159
Score = 26.7 bits (52), Expect(4) = 1e-030
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +1
Query: 349 FPRLNHAIIQLP 314
F RLNH IIQLP
Sbjct: 268 FTRLNHGIIQLP 303
Score = 23.5 bits (45), Expect(4) = 3e-035
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 359 WQAGGVEISDLM 394
WQA VEISDLM
Sbjct: 264 WQA*CVEISDLM 229
Score = 23.5 bits (45), Expect(4) = 3e-035
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / -2
Query: 213 LQAANHIRCSNQPT 254
LQAANHI QPT
Sbjct: 378 LQAANHISTLLQPT 337
Score = 22.1 bits (42), Expect(7) = 7e-046
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -1 / +1
Query: 141 NNHCTMFF 118
N+HCT+FF
Sbjct: 451 NDHCTIFF 474
Score = 22.1 bits (42), Expect(4) = 1e-030
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1 / +3
Query: 249 VGWSSVCDWLLA 214
VG +CDWLLA
Sbjct: 342 VGVVYLCDWLLA 377
Score = 22.1 bits (42), Expect(7) = 7e-046
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / +2
Query: 253 VGWLEQRM*LAAC 215
VGW M*LAAC
Sbjct: 338 VGWSSVLM*LAAC 376
>gb|CF432247.1|CF432247 NIT1_15_H11.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_15_H11_A002 3', mRNA sequence
Length = 419
Score = 99.6 bits (211), Expect(4) = 4e-026
Identities = 42/43 (97%), Positives = 42/43 (97%)
Frame = +1 / -3
Query: 454 YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*LESTITGLPD 582
YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*L STITGLPD
Sbjct: 129 YMAAAPPLDGQVTAMGLVTSCAPSLQVMDPNE*LTSTITGLPD 1
Score = 96.4 bits (204), Expect(3) = 2e-022
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = +3 / -2
Query: 453 LHGCCSTVGRPGHGNGARDVVRAVAPGDGSERVAGIHDHRVA* 581
LHGCCSTVGRPGHGNGA DVVR VAPGDG ERV +HDHRVA*
Sbjct: 130 LHGCCSTVGRPGHGNGAGDVVRTVAPGDGPERVTDVHDHRVA* 2
Score = 95.0 bits (201), Expect(6) = 2e-035
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = -2 / +2
Query: 581 SGNPVIVDSSYSFGSITWSDGAHDVTSPIAVTWPSNGG 468
SGNPVIVD SYSFGSITWSDGAHDVTSPIAVTWPSNGG
Sbjct: 2 SGNPVIVDVSYSFGSITWSDGAHDVTSPIAVTWPSNGG 115
Score = 89.5 bits (189), Expect(4) = 9e-026
Identities = 37/47 (78%), Positives = 39/47 (82%)
Frame = -3 / +3
Query: 580 QATR*SWIPATRSDPSPGATARTTSRAPLP*PGRPTVEQQPCSRLML 440
QATR*SW TRS PSPGAT RTTS APLP*PGRPTVEQQPC ++L
Sbjct: 3 QATR*SWTSVTRSGPSPGATVRTTSPAPLP*PGRPTVEQQPCRLMLL 143
Score = 34.5 bits (69), Expect(4) = 9e-026
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / +3
Query: 441 CCYCLPLWEEGQGHEPMRSEISTPPACHRNN 349
CCY L LWEE QGH+ S P R N
Sbjct: 147 CCYWLLLWEEEQGHQIRDLHASCLPLFTRLN 239
Score = 31.8 bits (63), Expect(6) = 2e-035
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +1
Query: 489 DLAVQRWSSSHV 454
DLAVQRWSSSHV
Sbjct: 94 DLAVQRWSSSHV 129
Score = 30.4 bits (60), Expect(6) = 2e-035
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -3 / +3
Query: 394 HEIRNLHASCLP 359
H+IR+LHASCLP
Sbjct: 186 HQIRDLHASCLP 221
Score = 30.4 bits (60), Expect(6) = 2e-035
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +2
Query: 442 LLLLSTAVGRRSGP 401
LLLL+TAVGRR+GP
Sbjct: 146 LLLLATAVGRRTGP 187
Score = 27.2 bits (53), Expect(4) = 4e-026
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / -1
Query: 397 LMALTFFPQR*TVAT 441
LMAL FFPQ+* VAT
Sbjct: 191 LMALFFFPQQ*PVAT 147
Score = 27.2 bits (53), Expect(6) = 2e-035
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +2
Query: 353 IISSTEPRNNSAAP 312
I+ ST PRNNSAAP
Sbjct: 221 IVYST*PRNNSAAP 262
Score = 26.7 bits (52), Expect(4) = 9e-026
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +3
Query: 349 FPRLNHAIIQLP 314
F RLNH IIQLP
Sbjct: 225 FTRLNHGIIQLP 260
Score = 25.8 bits (50), Expect(3) = 2e-022
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / -3
Query: 402 GPDLLPTAVDSSN 440
GP LLPTAV SSN
Sbjct: 186 GPVLLPTAVASSN 148
Score = 24.0 bits (46), Expect(4) = 4e-026
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1 / -3
Query: 358 MAGRRRGDFGSHGLMAL 408
MAG RGD GS G + L
Sbjct: 222 MAGMMRGDLGSDGPVLL 172
Score = 23.5 bits (45), Expect(3) = 2e-022
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -1
Query: 359 WQAGGVEISDLM 394
WQA VEISDLM
Sbjct: 221 WQA*CVEISDLM 186
Score = 23.5 bits (45), Expect(4) = 4e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / -1
Query: 213 LQAANHIRCSNQPT 254
LQAANHI QPT
Sbjct: 335 LQAANHISTLLQPT 294
Score = 22.1 bits (42), Expect(4) = 9e-026
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1 / +2
Query: 249 VGWSSVCDWLLA 214
VG +CDWLLA
Sbjct: 299 VGVVYLCDWLLA 334
Score = 22.1 bits (42), Expect(6) = 2e-035
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / +1
Query: 253 VGWLEQRM*LAAC 215
VGW M*LAAC
Sbjct: 295 VGWSSVLM*LAAC 333
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,017,856,833
Number of Sequences: 832831
Number of extensions: 17264434
Number of successful extensions: 168068
Number of sequences better than 1.0e-020: 10
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 21030021714
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)