TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3713091.2.1
(1013 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD463838.1|CD463838 ETH1_47_F10.b1_A002 Ethylene-treated... 182 7e-084
gb|CD463985.1|CD463985 ETH1_47_F10.g1_A002 Ethylene-treated... 275 1e-081
gb|CX622011.1|CX622011 GABR1_61_B06.g2_A002 GA- or brassino... 137 6e-066
gb|CN129146.1|CN129146 RHOH1_33_F09.g1_A002 Acid- and alkal... 138 1e-065
gb|CW168013.1|CW168013 104_577_11153917_148_36492_055 Sorgh... 230 1e-064
gb|CN149574.1|CN149574 WOUND1_63_D02.g1_A002 Wounded leaves... 151 7e-062
gb|CW224877.1|CW224877 104_662_11204056_116_37206_060 Sorgh... 230 7e-062
gb|CN129302.1|CN129302 RHOH1_34_D09.g1_A002 Acid- and alkal... 151 9e-062
gb|CD428130.1|CD428130 ETH1_32_C09.g1_A002 Ethylene-treated... 151 9e-062
gb|CX610774.1|CX610774 ANR1_20_F02.g1_A002 Anaerobic roots ... 151 9e-062
gb|CN143625.1|CN143625 WOUND1_17_A02.g1_A002 Wounded leaves... 149 4e-061
gb|CW298152.1|CW298152 104_780_11462428_116_35649_006 Sorgh... 136 3e-058
gb|CW290371.1|CW290371 104_769_11412975_116_35553_054 Sorgh... 127 1e-057
gb|CD463195.1|CD463195 ETH1_42_D08.g1_A002 Ethylene-treated... 123 2e-056
gb|CW095836.1|CW095836 104_461_11001557_148_34328_027 Sorgh... 130 1e-055
gb|CD430702.1|CD430702 ETH1_20_G03.g1_A002 Ethylene-treated... 151 4e-055
gb|BZ626753.1|BZ626753 ih48b09.b1 WGS-SbicolorF (DH5a methy... 141 2e-054
gb|CD432214.1|CD432214 ETH1_26_E09.g1_A002 Ethylene-treated... 138 5e-054
gb|CW215449.1|CW215449 104_647_11194545_116_37165_035 Sorgh... 109 2e-053
gb|CD431749.1|CD431749 ETH1_10_F11.g1_A002 Ethylene-treated... 131 3e-053
gb|CW183587.1|CW183587 104_599_11164694_148_36677_055 Sorgh... 138 7e-052
gb|CN138744.1|CN138744 OX1_13_D12.g1_A002 Oxidatively-stres... 139 7e-052
gb|CN134649.1|CN134649 OX1_27_D04.g1_A002 Oxidatively-stres... 151 8e-052
gb|CD432560.1|CD432560 ETH1_30_D08.g1_A002 Ethylene-treated... 144 2e-051
gb|CN134135.1|CN134135 OX1_20_B02.g1_A002 Oxidatively-stres... 123 5e-049
gb|BE358825.1|BE358825 DG1_32_D11.b1_A002 Dark Grown 1 (DG1... 151 5e-048
gb|CD428784.1|CD428784 ETH1_36_F06.b1_A002 Ethylene-treated... 127 7e-048
gb|CL157162.1|CL157162 104_344_10783358_114_31373_302 Sorgh... 101 2e-047
gb|CW248191.1|CW248191 104_709_11222168_148_35026_024 Sorgh... 139 3e-047
gb|CW036911.1|CW036911 104_268_10504039_114_30381 Sorghum m... 89 9e-047
gb|CF071635.1|CF071635 FE1_17_D03.g1_A002 Iron-deficient se... 127 1e-046
gb|CW490180.1|CW490180 fsbb001f275h22f0 Sorghum methylation... 113 1e-046
gb|BM330345.1|BM330345 PIC1_50_G02.g1_A002 Pathogen-infecte... 127 2e-045
gb|BF421398.1|BF421398 FM1_8_D04.b1_A003 Floral-Induced Mer... 136 2e-045
gb|CW301871.1|CW301871 104_785_11464426_148_36264_033 Sorgh... 121 6e-045
gb|BE360502.1|BE360502 DG1_64_A05.b1_A002 Dark Grown 1 (DG1... 87 7e-045
gb|CW459012.1|CW459012 fsbb001f205i21k0 Sorghum methylation... 127 2e-044
gb|CN133158.1|CN133158 OX1_10_B06.g1_A002 Oxidatively-stres... 138 3e-044
gb|CW395210.1|CW395210 fsbb001f083c11f0 Sorghum methylation... 117 3e-044
gb|BE360387.1|BE360387 DG1_63_F11.b1_A002 Dark Grown 1 (DG1... 117 3e-044
gb|CN132861.1|CN132861 OX1_8_E01.g1_A002 Oxidatively-stress... 117 3e-044
gb|BE594226.1|BE594226 WS1_103_H02.b1_A002 Water-stressed 1... 117 3e-044
gb|CW259602.1|CW259602 104_726_11228516_116_35191_080 Sorgh... 93 5e-044
gb|CD463496.1|CD463496 ETH1_44_A03.g1_A002 Ethylene-treated... 87 6e-044
gb|CW370296.1|CW370296 fsbb001f045c09k0 Sorghum methylation... 78 6e-044
gb|BM330354.1|BM330354 PIC1_50_H02.g1_A002 Pathogen-infecte... 125 1e-043
gb|CN147630.1|CN147630 WOUND1_50_H12.g1_A002 Wounded leaves... 136 2e-043
gb|BG240513.1|BG240513 OV1_30_H09.b1_A002 Ovary 1 (OV1) Sor... 94 2e-043
gb|CN140982.1|CN140982 OX1_48_C12.g1_A002 Oxidatively-stres... 134 2e-043
gb|CW224878.1|CW224878 104_662_11204056_148_37205_060 Sorgh... 127 3e-043
gb|CN130948.1|CN130948 RHOH1_44_H12.g1_A002 Acid- and alkal... 162 3e-043
gb|CN141293.1|CN141293 OX1_50_C03.g1_A002 Oxidatively-stres... 162 3e-043
gb|CD431093.1|CD431093 ETH1_6_H02.g1_A002 Ethylene-treated ... 162 3e-043
gb|CD225294.1|CD225294 CCC1_39_A01.g1_A007 Callus culture/c... 125 5e-043
gb|CD222247.1|CD222247 CCC1_2_A06.g1_A007 Callus culture/ce... 125 5e-043
gb|CD222182.1|CD222182 CCC1_2_E09.g1_A007 Callus culture/ce... 125 5e-043
gb|BE358056.1|BE358056 DG1_24_E12.b1_A002 Dark Grown 1 (DG1... 125 5e-043
gb|BI643627.1|BI643627 DG1_92_B06.b1_A002 Dark Grown 1 (DG1... 139 6e-043
gb|CW155745.1|CW155745 104_558_11146303_116_36367_026 Sorgh... 138 8e-043
gb|BM323141.1|BM323141 PIC1_8_B08.b1_A002 Pathogen-infected... 144 8e-043
gb|BM324939.1|BM324939 PIC1_37_G06.b1_A002 Pathogen-infecte... 144 8e-043
gb|CW139439.1|CW139439 104_529_11135238_148_34909_021 Sorgh... 138 1e-042
gb|CN139739.1|CN139739 OX1_23_G10.g1_A002 Oxidatively-stres... 117 1e-042
gb|CW226157.1|CW226157 104_664_11204738_148_37217_013 Sorgh... 139 1e-042
gb|CW247719.1|CW247719 104_708_11221917_116_36081_083 Sorgh... 67 2e-042
gb|CW434448.1|CW434448 fsbb001f150c10k0 Sorghum methylation... 144 2e-042
gb|CW434882.1|CW434882 fsbb001f150m16k0 Sorghum methylation... 144 2e-042
gb|BE355164.1|BE355164 DG1_10_E05.g1_A002 Dark Grown 1 (DG1... 99 9e-042
gb|CN145377.1|CN145377 WOUND1_28_C01.g1_A002 Wounded leaves... 111 1e-041
gb|BE355015.1|BE355015 DG1_10_E05.b1_A002 Dark Grown 1 (DG1... 99 1e-041
gb|CW209075.1|CW209075 104_638_11189032_148_36983_050 Sorgh... 84 2e-041
gb|BF421185.1|BF421185 FM1_6_E04.b1_A003 Floral-Induced Mer... 136 3e-041
gb|CW091410.1|CW091410 104_453_10998534_114_33029_025 Sorgh... 141 7e-041
gb|CW396616.1|CW396616 fsbb001f085c05k0 Sorghum methylation... 141 7e-041
gb|CW112321.1|CW112321 104_486_11104821_148_34541_093 Sorgh... 141 7e-041
gb|CW512360.1|CW512360 115_1_10510471_1_30023 Sorghum unfil... 141 7e-041
gb|CW036817.1|CW036817 104_268_10503984_115_30382 Sorghum m... 141 7e-041
gb|BZ342179.1|BZ342179 ic81a06.b1 WGS-SbicolorF (JM107 adap... 141 7e-041
gb|CN141237.1|CN141237 OX1_50_E02.b1_A002 Oxidatively-stres... 73 4e-040
gb|CN143544.1|CN143544 WOUND1_17_A02.b1_A002 Wounded leaves... 78 5e-040
gb|CW022096.1|CW022096 104_161_10431639_5_30007 Sorghum met... 141 6e-040
gb|CW238007.1|CW238007 104_694_11216489_148_37400_069 Sorgh... 138 1e-039
gb|CW467395.1|CW467395 fsbb001f219b03k0 Sorghum methylation... 129 1e-039
gb|CW141121.1|CW141121 104_532_11136149_116_34932_031 Sorgh... 129 1e-039
gb|BE356065.1|BE356065 DG1_122_C07.b1_A002 Dark Grown 1 (DG... 117 2e-039
gb|CN129214.1|CN129214 RHOH1_34_D09.b3_A002 Acid- and alkal... 76 2e-039
gb|CW161660.1|CW161660 104_568_11150530_148_36435_037 Sorgh... 99 3e-039
gb|CW290372.1|CW290372 104_769_11412975_148_35557_054 Sorgh... 127 4e-039
gb|CD430586.1|CD430586 ETH1_19_E05.g1_A002 Ethylene-treated... 116 4e-039
gb|CD463102.1|CD463102 ETH1_42_D08.b1_A002 Ethylene-treated... 65 4e-039
gb|CX610689.1|CX610689 ANR1_20_F02.b1_A002 Anaerobic roots ... 74 8e-039
gb|AW677374.1|AW677374 DG1_6_A02.b1_A002 Dark Grown 1 (DG1)... 153 1e-038
gb|CF072870.1|CF072870 FE1_26_A12.b1_A002 Iron-deficient se... 127 1e-038
gb|CW067572.1|CW067572 104_315_10524361_114_30124 Sorghum m... 161 2e-038
gb|CW304182.1|CW304182 104_789_11465646_148_35708_031 Sorgh... 161 2e-038
gb|CN134143.1|CN134143 OX1_20_B11.g1_A002 Oxidatively-stres... 150 2e-038
gb|CB925482.1|CB925482 ABA1_33_G05.g1_A012 Abscisic acid-tr... 138 3e-038
gb|CW033159.1|CW033159 104_262_10501795_115_30362 Sorghum m... 138 7e-038
gb|CW090102.1|CW090102 104_435_10949088_116_32599_084 Sorgh... 81 7e-038
gb|CW311029.1|CW311029 104_800_11470021_116_35753_057 Sorgh... 117 1e-037
gb|CW218302.1|CW218302 104_651_11196114_116_37067_065 Sorgh... 150 1e-037
gb|CW218303.1|CW218303 104_651_11196114_116_37459_065 Sorgh... 150 1e-037
gb|CW023422.1|CW023422 104_163_10432441_1_30001 Sorghum met... 157 3e-037
gb|CW321790.1|CW321790 104_815_11475741_148_35942_091 Sorgh... 131 3e-037
gb|BE362489.1|BE362489 DG1_87_C06.b1_A002 Dark Grown 1 (DG1... 143 6e-037
gb|CW137913.1|CW137913 104_525_11119926_148_34873_023 Sorgh... 90 6e-037
gb|CW137912.1|CW137912 104_525_11119926_116_34877_023 Sorgh... 90 6e-037
gb|CN124361.1|CN124361 RHOH1_4_F03.b1_A002 Acid- and alkali... 66 2e-036
gb|CN135950.1|CN135950 OX1_39_H10.g1_A002 Oxidatively-stres... 123 3e-036
gb|AW676903.1|AW676903 DG1_2_H05.b1_A002 Dark Grown 1 (DG1)... 87 3e-036
gb|AW676810.1|AW676810 DG1_1_F08.b1_A002 Dark Grown 1 (DG1)... 87 3e-036
gb|BF705100.1|BF705100 RHIZ2_1_D07.b1_A003 Rhizome2 (RHIZ2)... 123 4e-036
gb|AW677398.1|AW677398 DG1_6_C05.b1_A002 Dark Grown 1 (DG1)... 125 4e-036
gb|AW923105.1|AW923105 DG1_49_F10.b1_A002 Dark Grown 1 (DG1... 125 4e-036
gb|BF705368.1|BF705368 RHIZ2_3_B07.b1_A003 Rhizome2 (RHIZ2)... 123 4e-036
gb|AW677377.1|AW677377 DG1_6_A05.b1_A002 Dark Grown 1 (DG1)... 125 4e-036
gb|CW386824.1|CW386824 fsbb001f070o12f0 Sorghum methylation... 153 5e-036
gb|CW035319.1|CW035319 104_265_10503086_114_30378 Sorghum m... 152 7e-036
gb|CW467394.1|CW467394 fsbb001f219b03f0 Sorghum methylation... 56 2e-035
gb|CN125978.1|CN125978 RHOH1_14_A10.g1_A002 Acid- and alkal... 139 2e-035
gb|CW310613.1|CW310613 104_799_11469805_148_37433_049 Sorgh... 131 2e-035
gb|CN132388.1|CN132388 OX1_5_H04.g1_A002 Oxidatively-stress... 138 3e-035
gb|CW090101.1|CW090101 104_435_10949088_114_32597_084 Sorgh... 126 5e-035
gb|CW252883.1|CW252883 104_716_11224767_148_35098_060 Sorgh... 148 1e-034
gb|CW454471.1|CW454471 fsbb001f198o23k0 Sorghum methylation... 148 1e-034
gb|CN141311.1|CN141311 OX1_50_E02.g1_A002 Oxidatively-stres... 101 1e-034
gb|CX609701.1|CX609701 ANR1_14_F01.b1_A002 Anaerobic roots ... 136 1e-034
gb|CW220174.1|CW220174 104_654_11197212_116_37148_036 Sorgh... 127 1e-034
gb|CW024958.1|CW024958 104_226_10487881_116_30524 Sorghum m... 65 1e-034
gb|CW218492.1|CW218492 104_652_11196219_116_37460_014 Sorgh... 121 2e-034
gb|CW279627.1|CW279627 104_754_11407179_148_35439_008 Sorgh... 121 2e-034
gb|CW446759.1|CW446759 fsbb001f179j05f0 Sorghum methylation... 121 2e-034
gb|CW457970.1|CW457970 fsbb001f204a10k0 Sorghum methylation... 87 2e-034
gb|CW365896.1|CW365896 fsbb001f038k07f0 Sorghum methylation... 94 4e-034
gb|CL150040.1|CL150040 104_331_10778242_114_31355_178 Sorgh... 94 4e-034
gb|CW268578.1|CW268578 104_739_11401384_116_35309_058 Sorgh... 94 4e-034
gb|BM323592.1|BM323592 PIC1_21_B02.b1_A002 Pathogen-infecte... 94 4e-034
gb|BM323139.1|BM323139 PIC1_8_B06.b1_A002 Pathogen-infected... 94 4e-034
gb|CD219557.1|CD219557 CCC1_57_E04.g1_A007 Callus culture/c... 103 6e-034
gb|CD229233.1|CD229233 CCC1_13_F08.g1_A007 Callus culture/c... 103 6e-034
gb|CW174398.1|CW174398 104_586_11157384_116_36561_088 Sorgh... 146 6e-034
gb|CF427419.1|CF427419 PH1_1_A12.g1_A002 Phosphorous-defici... 113 6e-034
gb|CW141974.1|CW141974 104_533_11136596_148_34941_078 Sorgh... 114 8e-034
gb|BG557514.1|BG557514 EM1_54_B10.b1_A002 Embryo 1 (EM1) So... 111 2e-033
gb|CW447900.1|CW447900 fsbb001f181d19k0 Sorghum methylation... 123 2e-033
gb|CW161070.1|CW161070 104_567_11150217_148_36416_033 Sorgh... 67 5e-033
gb|CL172252.1|CL172252 104_374_10890016_116_31775_304 Sorgh... 125 8e-033
gb|CW124983.1|CW124983 104_505_11112086_148_34712_063 Sorgh... 141 1e-032
gb|CW180136.1|CW180136 104_594_11160476_148_36633_072 Sorgh... 133 2e-032
gb|CN137157.1|CN137157 OX1_55_B10.g1_A002 Oxidatively-stres... 132 2e-032
gb|CW401628.1|CW401628 fsbb001f092i09k0 Sorghum methylation... 132 2e-032
gb|CN132197.1|CN132197 OX1_4_D12.g1_A002 Oxidatively-stress... 132 2e-032
gb|CN142356.1|CN142356 WOUND1_9_B05.g1_A002 Wounded leaves ... 132 2e-032
gb|CD430870.1|CD430870 ETH1_5_F09.g1_A002 Ethylene-treated ... 132 2e-032
gb|CD463131.1|CD463131 ETH1_42_D03.g1_A002 Ethylene-treated... 132 2e-032
gb|CD430899.1|CD430899 ETH1_5_E09.g1_A002 Ethylene-treated ... 132 2e-032
gb|CN139737.1|CN139737 OX1_23_G08.g1_A002 Oxidatively-stres... 132 2e-032
gb|BG412766.1|BG412766 OV2_34_E08.b1_A002 Ovary 2 (OV2) Sor... 132 2e-032
gb|CN127401.1|CN127401 RHOH1_22_G02.g3_A002 Acid- and alkal... 73 3e-032
gb|CX622055.1|CX622055 GABR1_61_F04.g2_A002 GA- or brassino... 73 3e-032
gb|CL171842.1|CL171842 104_374_10889715_148_31774_003 Sorgh... 114 4e-032
gb|CW190530.1|CW190530 104_612_11174553_148_36834_043 Sorgh... 116 5e-032
gb|CW157339.1|CW157339 104_560_11147178_116_36386_069 Sorgh... 139 5e-032
gb|CN124295.1|CN124295 RHOH1_3_G12.g1_A002 Acid- and alkali... 139 5e-032
gb|CW492797.1|CW492797 fsbb001f283e08f0 Sorghum methylation... 126 5e-032
gb|CW310091.1|CW310091 104_799_11469537_116_35745_045 Sorgh... 115 7e-032
gb|CW204527.1|CW204527 104_632_11186589_148_36922_087 Sorgh... 115 7e-032
gb|CW198655.1|CW198655 104_623_11183089_148_36841_007 Sorgh... 115 7e-032
gb|CW416582.1|CW416582 fsbb001f117d07f0 Sorghum methylation... 115 7e-032
gb|BG557842.1|BG557842 EM1_55_A10.b1_A002 Embryo 1 (EM1) So... 114 7e-032
gb|CW248190.1|CW248190 104_709_11222168_116_35030_024 Sorgh... 139 7e-032
gb|CD463182.1|CD463182 ETH1_42_F03.g1_A002 Ethylene-treated... 129 9e-032
gb|CN141562.1|CN141562 OX1_52_A06.g1_A002 Oxidatively-stres... 138 2e-031
gb|CX622518.1|CX622518 GABR1_64_A06.g2_A002 GA- or brassino... 138 2e-031
gb|CW279626.1|CW279626 104_754_11407179_116_35435_008 Sorgh... 73 2e-031
gb|CN130350.1|CN130350 RHOH1_40_H08.g1_A002 Acid- and alkal... 73 2e-031
gb|CW226216.1|CW226216 104_664_11204768_116_37222_030 Sorgh... 93 4e-031
gb|CN129060.1|CN129060 RHOH1_33_F09.b3_A002 Acid- and alkal... 67 1e-030
gb|CN149218.1|CN149218 WOUND1_61_A02.g1_A002 Wounded leaves... 132 1e-030
gb|BZ332713.1|BZ332713 hx30b08.g1 WGS-SbicolorF (JM107 adap... 135 1e-030
gb|AW286086.2|AW286086 LG1_261_C01.b1_A002 Light Grown 1 (L... 91 2e-030
gb|CW426646.1|CW426646 fsbb001f138c14f0 Sorghum methylation... 77 3e-030
gb|CL179734.1|CL179734 104_389_10895515_148_31907_043 Sorgh... 77 3e-030
gb|CW301983.1|CW301983 104_786_11464484_148_35667_080 Sorgh... 77 3e-030
gb|CX621928.1|CX621928 GABR1_61_B06.b2_A002 GA- or brassino... 67 4e-030
gb|CL183364.1|CL183364 104_395_10898123_114_31917_347 Sorgh... 133 4e-030
gb|CX620716.1|CX620716 GABR1_53_C06.g1_A002 GA- or brassino... 133 4e-030
gb|CL175363.1|CL175363 104_380_10892393_148_31766_377 Sorgh... 79 5e-030
gb|CN134563.1|CN134563 OX1_27_D04.b1_A002 Oxidatively-stres... 78 5e-030
gb|CL178881.1|CL178881 104_387_10894905_116_31906_201 Sorgh... 132 1e-029
gb|CD220847.1|CD220847 CCC1_69_F04.g1_A007 Callus culture/c... 132 1e-029
gb|CN141334.1|CN141334 OX1_50_G06.g1_A002 Oxidatively-stres... 132 1e-029
gb|CN143356.1|CN143356 WOUND1_15_F02.g1_A002 Wounded leaves... 132 1e-029
gb|CN148797.1|CN148797 WOUND1_58_G11.g1_A002 Wounded leaves... 132 1e-029
gb|BE358144.1|BE358144 DG1_24_E12.g1_A002 Dark Grown 1 (DG1... 79 2e-029
gb|CW218304.1|CW218304 104_651_11196114_148_37066_065 Sorgh... 122 2e-029
gb|CW366630.1|CW366630 fsbb001f039l10k0 Sorghum methylation... 130 3e-029
gb|CW415526.1|CW415526 fsbb001f115k18f0 Sorghum methylation... 85 3e-029
gb|CW444008.1|CW444008 fsbb001f164g10k0 Sorghum methylation... 51 6e-029
gb|BE358620.1|BE358620 DG1_30_F09.b1_A002 Dark Grown 1 (DG1... 81 8e-029
gb|AW676991.1|AW676991 DG1_3_D10.b1_A002 Dark Grown 1 (DG1)... 81 8e-029
gb|CW139438.1|CW139438 104_529_11135238_116_34905_021 Sorgh... 128 1e-028
gb|CF675644.1|CF675644 GST3 Subtractive cDNA library from s... 128 1e-028
gb|CW323788.1|CW323788 104_818_11476816_148_35907_062 Sorgh... 103 1e-028
gb|CW500124.1|CW500124 fsbb001f295e09k0 Sorghum methylation... 103 1e-028
gb|CW137234.1|CW137234 104_523_11119182_148_34867_023 Sorgh... 73 2e-028
gb|CN138660.1|CN138660 OX1_13_D12.b1_A002 Oxidatively-stres... 93 2e-028
gb|CD463437.1|CD463437 ETH1_44_B03.g1_A002 Ethylene-treated... 73 3e-028
gb|BE363072.1|BE363072 DG1_9_F01.b1_A002 Dark Grown 1 (DG1)... 73 3e-028
gb|AW677154.1|AW677154 DG1_5_C08.b1_A002 Dark Grown 1 (DG1)... 73 3e-028
gb|BE361727.1|BE361727 DG1_82_F09.b1_A002 Dark Grown 1 (DG1... 73 3e-028
gb|AW923329.1|AW923329 DG1_51_F12.b1_A002 Dark Grown 1 (DG1... 73 3e-028
gb|BG239935.1|BG239935 OV1_30_H09.g1_A002 Ovary 1 (OV1) Sor... 59 4e-028
gb|CW177867.1|CW177867 104_591_11159260_116_36614_010 Sorgh... 91 5e-028
gb|CW218305.1|CW218305 104_651_11196114_148_37458_065 Sorgh... 116 2e-027
gb|BG649436.1|BG649436 EM1_79_D06.b1_A002 Embryo 1 (EM1) So... 117 5e-027
gb|CL190412.1|CL190412 104_408_10906068_114_32486_040 Sorgh... 108 7e-027
gb|CW098400.1|CW098400 104_464_11002986_148_34367_065 Sorgh... 52 1e-026
gb|CW292718.1|CW292718 104_772_11414235_116_35579_002 Sorgh... 121 2e-026
gb|BZ345790.1|BZ345790 ht57a10.b1 WGS-SbicolorF (JM107 adap... 103 4e-026
gb|BE593909.1|BE593909 WS1_103_H02.g1_A002 Water-stressed 1... 67 4e-026
gb|CW311030.1|CW311030 104_800_11470021_148_35757_057 Sorgh... 67 4e-026
gb|CN130505.1|CN130505 RHOH1_42_A05.b1_A002 Acid- and alkal... 58 8e-026
gb|CD462982.1|CD462982 ETH1_41_C06.g1_A002 Ethylene-treated... 119 8e-026
gb|CN138525.1|CN138525 OX1_64_G04.b1_A002 Oxidatively-stres... 104 9e-026
gb|CW032162.1|CW032162 104_261_10501223_114_30363 Sorghum m... 118 1e-025
gb|CW067692.1|CW067692 104_315_10524451_114_30124 Sorghum m... 117 2e-025
gb|CW302191.1|CW302191 104_786_11464593_116_35664_043 Sorgh... 104 2e-025
gb|BM323138.1|BM323138 PIC1_8_B05.b1_A002 Pathogen-infected... 90 3e-025
gb|BZ341024.1|BZ341024 ic42f05.b1 WGS-SbicolorF (JM107 adap... 108 3e-025
gb|BG559403.1|BG559403 RHIZ2_54_D07.b1_A003 Rhizome2 (RHIZ2... 116 8e-025
gb|CW493277.1|CW493277 fsbb001f283p16f0 Sorghum methylation... 115 1e-024
gb|CN124436.1|CN124436 RHOH1_4_F03.g1_A002 Acid- and alkali... 114 3e-024
gb|BE358852.1|BE358852 DG1_32_D11.g1_A002 Dark Grown 1 (DG1... 58 3e-024
gb|AW287684.2|AW287684 LG1_271_B05.b1_A002 Light Grown 1 (L... 112 1e-023
gb|CW155746.1|CW155746 104_558_11146303_148_36368_026 Sorgh... 47 2e-022
gb|CW298153.1|CW298153 104_780_11462428_148_35653_006 Sorgh... 62 6e-022
gb|BI643620.1|BI643620 DG1_91_G03.b1_A002 Dark Grown 1 (DG1... 106 6e-022
gb|CW252633.1|CW252633 104_715_11224618_148_35091_033 Sorgh... 55 7e-022
gb|CW068471.1|CW068471 104_317_10525139_1_30096 Sorghum met... 54 2e-021
gb|CN145297.1|CN145297 WOUND1_28_C01.b2_A002 Wounded leaves... 87 3e-021
gb|CW416583.1|CW416583 fsbb001f117d07k0 Sorghum methylation... 52 6e-021
gb|CW206987.1|CW206987 104_635_11187877_116_36961_049 Sorgh... 52 6e-021
>gb|CD463838.1|CD463838 ETH1_47_F10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_47_F10_A002 3', mRNA sequence
Length = 763
Score = 182 bits (392), Expect(4) = 7e-084
Identities = 74/99 (74%), Positives = 76/99 (76%)
Frame = +1 / +2
Query: 241 KSNPVHKKVPVLIHNGKPICESLVIMQYVDELFAGRPILPTDPYERATARFWAAYADDKL 420
KSNPVHKKVPVLIHNGKPICESLVI+QYVDELFAGR ILP DP+ERATARFWAAY DDKL
Sbjct: 2 KSNPVHKKVPVLIHNGKPICESLVILQYVDELFAGRSILPADPFERATARFWAAYVDDKL 181
Query: 421 FPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTFAKCSG 537
FPAWYGMV IE MEV FAKCSG
Sbjct: 182 FPAWYGMVKAQAEEERAEKVKETLAAIEKMEVAFAKCSG 298
Score = 158 bits (339), Expect(3) = 3e-070
Identities = 69/96 (71%), Positives = 70/96 (72%)
Frame = -1 / -2
Query: 536 PEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSSA*AAQKRAVARS*GSVG 357
PEHLAK TS+ FTMPYHAGNNLSS *AAQKRAVARS GS G
Sbjct: 297 PEHLAKATSIFSIAASVSFTFSALSSSAWAFTMPYHAGNNLSST*AAQKRAVARSKGSAG 118
Query: 356 RIGRPANSSSTYCMMTSDSQMGLPLWMSTGTFLCTG 249
RI RPANSSSTYC MTSDSQMGLPLWMSTGTFLCTG
Sbjct: 117 RIDRPANSSSTYCRMTSDSQMGLPLWMSTGTFLCTG 10
Score = 142 bits (305), Expect(2) = 2e-060
Identities = 60/68 (88%), Positives = 62/68 (91%)
Frame = -3 / -1
Query: 444 HHAVPRWKQLVVGVGSPEASSGALVGVGWEDRPAGEQLVDVLHDDE*LADGLTVVDEHGH 265
HHAVPR +QLVV VGSPEASSGAL GVGW+DRPA EQLVDVL DDE*L DGLTVVDEHGH
Sbjct: 205 HHAVPRREQLVVDVGSPEASSGALEGVGWKDRPASEQLVDVLQDDE*LTDGLTVVDEHGH 26
Query: 264 LLVHRVGL 241
LLVHRVGL
Sbjct: 25 LLVHRVGL 2
Score = 127 bits (271), Expect(4) = 7e-084
Identities = 54/64 (84%), Positives = 58/64 (90%)
Frame = +3 / +2
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVPLPTADMAVQYINK 770
VLGSFLFWFEAVRRV LEII+ASKTPLLAAWAERF G+VEAKEVVP+P AD+AVQYINK
Sbjct: 350 VLGSFLFWFEAVRRVDGLEIIDASKTPLLAAWAERFGGSVEAKEVVPVPEADLAVQYINK 529
Query: 771 LHAP 782
AP
Sbjct: 530 FRAP 541
Score = 126 bits (269), Expect(3) = 3e-070
Identities = 52/63 (82%), Positives = 54/63 (85%)
Frame = -1 / -1
Query: 779 GMKLIDVLYRHVRRGQRHHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQEG 600
G KLIDVLYR VR RHHLLRFY+P KPLRPRSQ+RSLA VNDLQ NPAHRLEPEQEG
Sbjct: 538 GTKLIDVLYRQVRLRHRHHLLRFYTPSKPLRPRSQERSLARVNDLQAVNPAHRLEPEQEG 359
Query: 599 AEH 591
AEH
Sbjct: 358 AEH 350
Score = 114 bits (244), Expect(2) = 2e-060
Identities = 51/62 (82%), Positives = 53/62 (85%)
Frame = -2 / -2
Query: 781 GA*SLLMYCTAMSAVGNGTTSFASTVPTNRSAHAANSGVLLALMISRSKTLRTASNQNKK 602
GA +LLMYCTA SA G GTTSFAST+P NRSAHAA SGVLLA MISR TLRTASNQNKK
Sbjct: 540 GARNLLMYCTAKSASGTGTTSFASTLPPNRSAHAAKSGVLLASMISRPSTLRTASNQNKK 361
Query: 601 EP 596
EP
Sbjct: 360 EP 355
Score = 70.7 bits (148), Expect(4) = 3e-030
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = +2 / +3
Query: 344 AGRSSQPTPTSAPLLASGLPTPTTSCFQRGTAW* 445
AGRS QPTP+SAPLLASGLPT TTSC +RGTAW*
Sbjct: 105 AGRSFQPTPSSAPLLASGLPTSTTSCSRRGTAW* 206
Score = 61.6 bits (128), Expect(4) = 3e-030
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +2 / +1
Query: 629 QGFRPGDH*R*QDSAVGCVGGAVCRDCRSE 718
QG RPGDH*R QDSA+GCVGGAV R+CRSE
Sbjct: 388 QG*RPGDH*REQDSALGCVGGAVWRECRSE 477
Score = 59.3 bits (123), Expect(3) = 5e-023
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = -3 / -3
Query: 717 SLLQSLQTAPPTQPTAESC*R**SPGRKPC 628
SLL SLQTAPPTQP AESC R *SPGR+PC
Sbjct: 476 SLLHSLQTAPPTQPRAESCSRQ*SPGRQPC 387
Score = 52.8 bits (109), Expect(3) = 5e-023
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = -2 / -3
Query: 295 WAYRCG*ARAPSCAPGWT 242
WAYRCG*ARAPSCAPGWT
Sbjct: 56 WAYRCG*ARAPSCAPGWT 3
Score = 40.5 bits (82), Expect(4) = 7e-084
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1 / +2
Query: 532 SGGNAFFGGDSIGYVDIVL 588
+G AFFGGDSIGYVDIVL
Sbjct: 299 NGNAAFFGGDSIGYVDIVL 355
Score = 39.6 bits (80), Expect(4) = 3e-030
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3 / +1
Query: 240 QVQPGAQEGARAHPQ 284
QVQPGAQEGARAHPQ
Sbjct: 1 QVQPGAQEGARAHPQ 45
Score = 39.1 bits (79), Expect(3) = 5e-023
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -1 / -2
Query: 641 VENPAHRLEPEQEGAEHVSTMST*PMESPPKKALPP 534
+ P+ + + STMST*PMESPPKKA P
Sbjct: 408 ISRPSTLRTASNQNKKEPSTMST*PMESPPKKAALP 301
Score = 25.8 bits (50), Expect(4) = 7e-084
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 935 SRLLCNKYKY 964
SRLLCNKY Y
Sbjct: 730 SRLLCNKYDY 759
Score = 22.1 bits (42), Expect(4) = 3e-030
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / +3
Query: 754 YSTSISFMP 780
YSTSISF+P
Sbjct: 513 YSTSISFVP 539
Score = 22.1 bits (42), Expect(3) = 3e-070
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 897 NISFEHYSVGI 865
+ F+HYSVGI
Sbjct: 670 SFKFQHYSVGI 638
>gb|CD463985.1|CD463985 ETH1_47_F10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_47_F10_A002 5', mRNA sequence
Length = 598
Score = 275 bits (594), Expect(3) = 1e-081
Identities = 113/148 (76%), Positives = 122/148 (82%)
Frame = +1 / +1
Query: 94 ETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPV 273
ETMA KE LK+LGLQ+SPFV+RVC+AL MKGVS+EYVEED++NKSELLLKSNPVHKKVPV
Sbjct: 73 ETMADKEDLKLLGLQLSPFVIRVCMALTMKGVSFEYVEEDLNNKSELLLKSNPVHKKVPV 252
Query: 274 LIHNGKPICESLVIMQYVDELFAGRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXX 453
LIHNGKPICESLVI+QYVDELFAGR ILP DP+ERATARFWAAY DDKLFPAWYGMV
Sbjct: 253 LIHNGKPICESLVILQYVDELFAGRSILPADPFERATARFWAAYVDDKLFPAWYGMVKAQ 432
Query: 454 XXXXXXXXXXXXXXXIEHMEVTFAKCSG 537
IE MEV FAKCSG
Sbjct: 433 AEEERAEKVKETLAAIEKMEVAFAKCSG 516
Score = 231 bits (499), Expect(3) = 2e-067
Identities = 99/117 (84%), Positives = 103/117 (88%)
Frame = -3 / -2
Query: 444 HHAVPRWKQLVVGVGSPEASSGALVGVGWEDRPAGEQLVDVLHDDE*LADGLTVVDEHGH 265
HHAVPR +QLVV VGSPEASSGAL GVGW+DRPA EQLVDVL DDE*L DGLTVVDEHGH
Sbjct: 423 HHAVPRREQLVVDVGSPEASSGALEGVGWKDRPASEQLVDVLQDDE*LTDGLTVVDEHGH 244
Query: 264 LLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQAHAEHERAHLQAEDLKTLLARHCF 94
LLVHRVGLEQELTLV VLLDVL THSFH QR AHA+HERA LQAE+LK LL RHCF
Sbjct: 243 LLVHRVGLEQELTLVVQVLLDVLETHSFHGQRHAHADHERAQLQAEELKILLVRHCF 73
Score = 210 bits (452), Expect(2) = 9e-054
Identities = 95/148 (64%), Positives = 98/148 (66%)
Frame = -1 / -3
Query: 536 PEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSSA*AAQKRAVARS*GSVG 357
PEHLAK TS+ FTMPYHAGNNLSS *AAQKRAVARS GS G
Sbjct: 515 PEHLAKATSIFSIAASVSFTFSALSSSAWAFTMPYHAGNNLSST*AAQKRAVARSKGSAG 336
Query: 356 RIGRPANSSSTYCMMTSDSQMGLPLWMSTGTFLCTGXXXXXXXXXXXXXXXXXXXLTPFM 177
RI RPANSSSTYC MTSDSQMGLPLWMSTGTFLCTG LTPFM
Sbjct: 335 RIDRPANSSSTYCRMTSDSQMGLPLWMSTGTFLCTGLDLSRSSLLLFRSSSTYSKLTPFM 156
Query: 176 FSAKHTRSTNGLTCRPRTLRPSLPAIVS 93
SA HTR TNGL+CRPR+LR SL AIVS
Sbjct: 155 VSAMHTRITNGLSCRPRSLRSSLSAIVS 72
Score = 123 bits (263), Expect = 5e-027
Identities = 50/57 (87%), Positives = 51/57 (89%)
Frame = -2 / -1
Query: 295 WAYRCG*ARAPSCAPGWT*AGAHSCWICPPRRTRNSLLSCSAPSTRGARTGSPAGRG 125
WAYRCG*ARAPSCAPGWT*AGAHSC PPRRTRNSLLS SAP TRG+RTGS AGRG
Sbjct: 274 WAYRCG*ARAPSCAPGWT*AGAHSCCSGPPRRTRNSLLSWSAPCTRGSRTGSAAGRG 104
Score = 108 bits (231), Expect(3) = 6e-040
Identities = 46/53 (86%), Positives = 47/53 (88%)
Frame = +3 / +3
Query: 126 PRPAGEPVRAPRVLGAEHERSELRVRRGGHIQQE*APAQVQPGAQEGARAHPQ 284
PRPA EPVR PRV GA+HERSE RVRRGG QQE*APAQVQPGAQEGARAHPQ
Sbjct: 105 PRPAAEPVRDPRVHGADHERSEFRVRRGGPEQQE*APAQVQPGAQEGARAHPQ 263
Score = 70.7 bits (148), Expect(3) = 6e-040
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = +2 / +2
Query: 344 AGRSSQPTPTSAPLLASGLPTPTTSCFQRGTAW* 445
AGRS QPTP+SAPLLASGLPT TTSC +RGTAW*
Sbjct: 323 AGRSFQPTPSSAPLLASGLPTSTTSCSRRGTAW* 424
Score = 40.5 bits (82), Expect(3) = 1e-081
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1 / +1
Query: 532 SGGNAFFGGDSIGYVDIVL 588
+G AFFGGDSIGYVDIVL
Sbjct: 517 NGNAAFFGGDSIGYVDIVL 573
Score = 37.7 bits (76), Expect(3) = 2e-067
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1 / -3
Query: 587 STMST*PMESPPKKALPP 534
STMST*PMESPPKKA P
Sbjct: 572 STMST*PMESPPKKAALP 519
Score = 29.0 bits (57), Expect(3) = 1e-081
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +2
Query: 589 TCSAPSCSGSR 621
+CSAPSCSGSR
Sbjct: 566 SCSAPSCSGSR 598
Score = 28.6 bits (56), Expect(3) = 6e-040
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / +1
Query: 591 VLGSFLFWFE 620
VLGSFLFWFE
Sbjct: 568 VLGSFLFWFE 597
Score = 27.6 bits (54), Expect(3) = 2e-067
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / -2
Query: 620 LEPEQEGAEH 591
LEPEQEGAEH
Sbjct: 597 LEPEQEGAEH 568
Score = 22.6 bits (43), Expect(2) = 9e-054
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / -3
Query: 619 SNQNKKEP 596
SNQNKKEP
Sbjct: 596 SNQNKKEP 573
>gb|CX622011.1|CX622011 GABR1_61_B06.g2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_61_B06_A002 5', mRNA sequence
Length = 760
Score = 137 bits (293), Expect(4) = 6e-066
Identities = 54/78 (69%), Positives = 69/78 (88%)
Frame = +1 / +1
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
L +LGL VSPF LRV +AL++KG+SYEYVE+D+ +KS+LLL SNPVHKKVPVLIHNGKPI
Sbjct: 76 LTLLGLHVSPFALRVRMALDLKGLSYEYVEQDLFHKSDLLLTSNPVHKKVPVLIHNGKPI 255
Query: 298 CESLVIMQYVDELFAGRP 351
CESLV+++Y++E + G P
Sbjct: 256 CESLVVLEYLEEAWPGPP 309
Score = 108 bits (230), Expect(4) = 3e-042
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -3 / -2
Query: 342 GEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQA 163
G L +VL DDE LADGL VVDEHG LLVH VG E+E+ LV VLLDVLV + VQR A
Sbjct: 300 GPGLFEVLQDDERLADGLAVVDEHGDLLVHGVGGEEEVALVEQVLLDVLVAQALQVQRHA 121
Query: 162 HAEHERAHLQAEDLKTLL 109
HA+ ERAH+QA+ +T L
Sbjct: 120 HAKRERAHVQAQQRQTTL 67
Score = 67.0 bits (140), Expect(4) = 6e-066
Identities = 27/67 (40%), Positives = 34/67 (50%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G ILP DPY RA ARFWAAY D KLFPAW ++ + ++E F
Sbjct: 322 GAAILPADPYGRAVARFWAAYIDGKLFPAWVDVMKAATEEERAEKVKETHAAVLNLEKAF 501
Query: 523 AKCSGGN 543
A+ + N
Sbjct: 502 AEITSSN 522
Score = 66.6 bits (139), Expect(4) = 6e-066
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +3 / +1
Query: 594 LGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVPLPTADMA 752
LG L WF A+R +F +E+I+ ++ PLLAAWAERF T AKEV+P P +A
Sbjct: 595 LGCSLPWFGALRAMFGVEVIDVAQAPLLAAWAERFAETAVAKEVLPEPDQAVA 753
Score = 64.3 bits (134), Expect(4) = 5e-031
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = -1 / -3
Query: 350 GRPANSSSTYCMMTSDSQMGLPLWMSTGTFLCTG 249
G P +SS Y T DSQMGLPLWMSTGTFLCTG
Sbjct: 308 GGPGQASSRYSRTTRDSQMGLPLWMSTGTFLCTG 207
Score = 50.6 bits (104), Expect(4) = 3e-042
Identities = 26/53 (49%), Positives = 30/53 (56%)
Frame = -1 / -2
Query: 752 RHVRRGQRHHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQEGAE 594
RH R HLL KPL PR QQRSL++V+DL E+ A R EP Q E
Sbjct: 753 RHSLVRFRQHLLGHGGFRKPLGPRRQQRSLSNVDDLDAEHGAQRPEPRQGAPE 595
Score = 48.3 bits (99), Expect(4) = 5e-031
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = -2 / -3
Query: 736 GNGTTSFASTVPTNRSAHAANSGVLLALMISRSKTLRTASNQNKKEP 596
G+G+TS A+ V NRSAHAA+SG M S R+A N ++ P
Sbjct: 737 GSGSTSLATAVSANRSAHAASSGA*ATSMTSTPNMARSAPNHGREHP 597
Score = 46.9 bits (96), Expect(4) = 3e-042
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -1 / -3
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRP 342
HAGN+L S *AAQKRA AR *GS GR+ P
Sbjct: 410 HAGNSLPSM*AAQKRATARP*GSAGRMAAP 321
Score = 46.4 bits (95), Expect(4) = 5e-031
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = -3 / -2
Query: 444 HHAVPRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
H PR +QL V VG PEAS GA VGV ED AG
Sbjct: 423 HDVYPRREQLAVDVGGPEASDGAAVGVSGEDGCAG 319
Score = 39.6 bits (80), Expect(4) = 6e-066
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1 / +1
Query: 547 FFGGDSIGYVDIVLTCSAP 603
FFGGDS+GY+D+ L CS P
Sbjct: 556 FFGGDSVGYLDLALGCSLP 612
Score = 37.7 bits (76), Expect(4) = 5e-031
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = -1 / -3
Query: 185 PFMFSAKHTRSTNGLTCRPRTLRPSLPAIVSLSRYIFPLPLYLF 54
PF SA TRS GLTCRP ++R ++++ S L Y F
Sbjct: 143 PFRSSAMRTRSAKGLTCRPSSVRRPSASLLTASAIDGCLLAYAF 12
Score = 29.0 bits (57), Expect(4) = 3e-042
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1 / -3
Query: 602 GAEHVSTMST*PMESPPKK 546
G EH S S P ESPPKK
Sbjct: 611 GREHPSARSRYPTESPPKK 555
>gb|CN129146.1|CN129146 RHOH1_33_F09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_33_F09_A002 5', mRNA sequence
Length = 753
Score = 138 bits (295), Expect(4) = 1e-065
Identities = 54/78 (69%), Positives = 70/78 (89%)
Frame = +1 / +3
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
L +LGL VSPF LRV +AL++KG+SYEYVE+D+ +KS+LLL SNPVHKKVPVLIHNGKPI
Sbjct: 96 LTLLGLHVSPFALRVRMALDLKGLSYEYVEQDLFHKSDLLLTSNPVHKKVPVLIHNGKPI 275
Query: 298 CESLVIMQYVDELFAGRP 351
CESLV+++Y++E++ G P
Sbjct: 276 CESLVVLEYLEEVWPGPP 329
Score = 109 bits (232), Expect(4) = 2e-042
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -3 / -2
Query: 342 GEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQA 163
G L +VL DDE LADGL VVDEHG LLVH VG E+E+ LV VLLDVLV + VQR A
Sbjct: 320 GPDLFEVLQDDERLADGLAVVDEHGDLLVHGVGGEEEVALVEQVLLDVLVAQALQVQRHA 141
Query: 162 HAEHERAHLQAEDLKTLL 109
HA+ ERAH+QA+ +T L
Sbjct: 140 HAKRERAHVQAQQRQTTL 87
Score = 67.0 bits (140), Expect(4) = 1e-065
Identities = 27/67 (40%), Positives = 34/67 (50%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G ILP DPY RA ARFWAAY D KLFPAW ++ + ++E F
Sbjct: 342 GAAILPADPYGRAVARFWAAYIDGKLFPAWVDVMKAATEEERAEKVKETHAAVLNLEKAF 521
Query: 523 AKCSGGN 543
A+ + N
Sbjct: 522 AEITSSN 542
Score = 64.3 bits (134), Expect(4) = 1e-065
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +3 / +3
Query: 594 LGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVP 731
LG L WF A+R +F +E+I+ ++ PLLAAWAERF T AKEV+P
Sbjct: 615 LGCSLPWFGALRAMFGVEVIDVAQAPLLAAWAERFAETAVAKEVLP 752
Score = 64.3 bits (134), Expect(4) = 4e-030
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = -1 / -3
Query: 350 GRPANSSSTYCMMTSDSQMGLPLWMSTGTFLCTG 249
G P +SS Y T DSQMGLPLWMSTGTFLCTG
Sbjct: 328 GGPGQTSSRYSRTTRDSQMGLPLWMSTGTFLCTG 227
Score = 50.1 bits (103), Expect(4) = 2e-042
Identities = 24/46 (52%), Positives = 28/46 (60%)
Frame = -1 / -2
Query: 731 RHHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQEGAE 594
R HLL KPL PR QQRSL++V+DL E+ A R EP Q E
Sbjct: 752 RQHLLGHGGFRKPLGPRRQQRSLSNVDDLDAEHGAQRPEPRQGAPE 615
Score = 46.9 bits (96), Expect(4) = 2e-042
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -1 / -3
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRP 342
HAGN+L S *AAQKRA AR *GS GR+ P
Sbjct: 430 HAGNSLPSM*AAQKRATARP*GSAGRMAAP 341
Score = 46.4 bits (95), Expect(4) = 4e-030
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = -3 / -2
Query: 444 HHAVPRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
H PR +QL V VG PEAS GA VGV ED AG
Sbjct: 443 HDVYPRREQLAVDVGGPEASDGAAVGVSGEDGCAG 339
Score = 45.1 bits (92), Expect(4) = 4e-030
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -2 / -3
Query: 730 GTTSFASTVPTNRSAHAANSGVLLALMISRSKTLRTASNQNKKEP 596
G+TS A+ V NRSAHAA+SG M S R+A N ++ P
Sbjct: 751 GSTSLATAVSANRSAHAASSGA*ATSMTSTPNMARSAPNHGREHP 617
Score = 39.6 bits (80), Expect(4) = 1e-065
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1 / +3
Query: 547 FFGGDSIGYVDIVLTCSAP 603
FFGGDS+GY+D+ L CS P
Sbjct: 576 FFGGDSVGYLDLALGCSLP 632
Score = 37.7 bits (76), Expect(4) = 4e-030
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = -1 / -3
Query: 185 PFMFSAKHTRSTNGLTCRPRTLRPSLPAIVSLSRYIFPLPLYLF 54
PF SA TRS GLTCRP ++R ++++ S L Y F
Sbjct: 163 PFRSSAMRTRSAKGLTCRPSSVRRPSASLLTASTIDGCLLAYAF 32
Score = 29.0 bits (57), Expect(4) = 2e-042
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1 / -3
Query: 602 GAEHVSTMST*PMESPPKK 546
G EH S S P ESPPKK
Sbjct: 631 GREHPSARSRYPTESPPKK 575
>gb|CW168013.1|CW168013 104_577_11153917_148_36492_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11153917, DNA
sequence
Length = 635
Score = 230 bits (497), Expect(3) = 1e-064
Identities = 93/109 (85%), Positives = 103/109 (94%)
Frame = +1 / +1
Query: 94 ETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPV 273
ETMA KE LK+LGLQ+SPFV+RVC+AL MKGVS+EYVEED++NKSELLLKSNPVHKKVPV
Sbjct: 136 ETMADKEDLKLLGLQLSPFVIRVCMALTMKGVSFEYVEEDLNNKSELLLKSNPVHKKVPV 315
Query: 274 LIHNGKPICESLVIMQYVDELFAGRPILPTDPYERATARFWAAYADDKL 420
LIHNGKPICESLVI+QYVDELFAGR ILP DP+ERATARFWAAY DDK+
Sbjct: 316 LIHNGKPICESLVILQYVDELFAGRSILPADPFERATARFWAAYVDDKV 462
Score = 213 bits (460), Expect(3) = 8e-059
Identities = 92/108 (85%), Positives = 95/108 (87%)
Frame = -3 / -3
Query: 417 LVVGVGSPEASSGALVGVGWEDRPAGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLE 238
LVV VGSPEASSGAL GVGW+DRPA EQLVDVL DDE*L DGLTVVDEHGHLLVHRVGLE
Sbjct: 459 LVVDVGSPEASSGALEGVGWKDRPASEQLVDVLQDDE*LTDGLTVVDEHGHLLVHRVGLE 280
Query: 237 QELTLVGYVLLDVLVTHSFHVQRQAHAEHERAHLQAEDLKTLLARHCF 94
QELTLV VLLDVL THSFH QR AHA+HERA LQAE+LK LL RHCF
Sbjct: 279 QELTLVVQVLLDVLETHSFHGQRHAHADHERAQLQAEELKILLVRHCF 136
Score = 170 bits (366), Expect(3) = 2e-044
Identities = 77/110 (70%), Positives = 80/110 (72%)
Frame = -1 / -1
Query: 422 NNLSSA*AAQKRAVARS*GSVGRIGRPANSSSTYCMMTSDSQMGLPLWMSTGTFLCTGXX 243
+ LSS *AAQKRAVARS GS GRI RPANSSSTYC MTSDSQMGLPLWMSTGTFLCTG
Sbjct: 464 HTLSST*AAQKRAVARSKGSAGRIDRPANSSSTYCRMTSDSQMGLPLWMSTGTFLCTGLD 285
Query: 242 XXXXXXXXXXXXXXXXXLTPFMFSAKHTRSTNGLTCRPRTLRPSLPAIVS 93
LTPFM SA HTR TNGL+CRPR+LR SL AIVS
Sbjct: 284 LSRSSLLLFRSSSTYSKLTPFMVSAMHTRITNGLSCRPRSLRSSLSAIVS 135
Score = 123 bits (263), Expect(2) = 2e-028
Identities = 50/57 (87%), Positives = 51/57 (89%)
Frame = -2 / -2
Query: 295 WAYRCG*ARAPSCAPGWT*AGAHSCWICPPRRTRNSLLSCSAPSTRGARTGSPAGRG 125
WAYRCG*ARAPSCAPGWT*AGAHSC PPRRTRNSLLS SAP TRG+RTGS AGRG
Sbjct: 337 WAYRCG*ARAPSCAPGWT*AGAHSCCSGPPRRTRNSLLSWSAPCTRGSRTGSAAGRG 167
Score = 108 bits (231), Expect(4) = 2e-036
Identities = 46/53 (86%), Positives = 47/53 (88%)
Frame = +3 / +3
Query: 126 PRPAGEPVRAPRVLGAEHERSELRVRRGGHIQQE*APAQVQPGAQEGARAHPQ 284
PRPA EPVR PRV GA+HERSE RVRRGG QQE*APAQVQPGAQEGARAHPQ
Sbjct: 168 PRPAAEPVRDPRVHGADHERSEFRVRRGGPEQQE*APAQVQPGAQEGARAHPQ 326
Score = 50.6 bits (104), Expect(4) = 2e-036
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +2 / +2
Query: 344 AGRSSQPTPTSAPLLASGLPTPTT 415
AGRS QPTP+SAPLLASGLPT TT
Sbjct: 386 AGRSFQPTPSSAPLLASGLPTSTT 457
Score = 29.0 bits (57), Expect(3) = 1e-064
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2 / +2
Query: 5 SLAQTRSKIGLAGY 46
SLAQTRSKIGL Y
Sbjct: 38 SLAQTRSKIGLVSY 79
Score = 28.1 bits (55), Expect(3) = 1e-064
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / +2
Query: 415 KLFPAWYGMV 444
+LFPAWYGMV
Sbjct: 554 QLFPAWYGMV 583
Score = 28.1 bits (55), Expect(4) = 2e-036
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1 / +1
Query: 7 SCTDSEQDRPSWLQAKNK 60
SCTDSEQDR S L + +
Sbjct: 40 SCTDSEQDRTS*LHTRQE 93
Score = 27.6 bits (54), Expect(3) = 8e-059
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -3
Query: 443 TMPYHAGNN 417
TMPYHAGNN
Sbjct: 582 TMPYHAGNN 556
Score = 26.7 bits (52), Expect(3) = 8e-059
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1 / -1
Query: 53 LACNQLGLSCSESVQE 6
L C+ L LSCSESVQ+
Sbjct: 86 LVCS*LVLSCSESVQD 39
Score = 26.3 bits (51), Expect(3) = 2e-044
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2 / -2
Query: 46 VTS*AYLAPSLCK 8
V +*+YLAPSLCK
Sbjct: 79 VAN*SYLAPSLCK 41
Score = 24.0 bits (46), Expect(2) = 2e-028
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / -3
Query: 33 PILLRVCAR 7
PILLRVCAR
Sbjct: 66 PILLRVCAR 40
Score = 23.1 bits (44), Expect(4) = 2e-036
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 416 SCFQRGTAW* 445
SC +RGTAW*
Sbjct: 555 SCSRRGTAW* 584
Score = 22.6 bits (43), Expect(3) = 2e-044
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / -2
Query: 444 HHAVPRWKQL 415
HHAVPR +QL
Sbjct: 583 HHAVPRREQL 554
>gb|CN149574.1|CN149574 WOUND1_63_D02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_63_D02_A002 5', mRNA sequence
Length = 741
Score = 151 bits (325), Expect(4) = 7e-062
Identities = 61/83 (73%), Positives = 74/83 (89%)
Frame = +1 / +3
Query: 97 TMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVL 276
+MAG + LK+LG+ SP+VLRV LAL++KG+SYEYVEED+ +KSELLLKSNPVH KVPVL
Sbjct: 54 SMAGGDDLKLLGMWASPYVLRVKLALSLKGLSYEYVEEDLRDKSELLLKSNPVHSKVPVL 233
Query: 277 IHNGKPICESLVIMQYVDELFAG 345
IHNGKP+CES VI+QY+DE FAG
Sbjct: 234 IHNGKPVCESQVILQYIDEAFAG 302
Score = 89.0 bits (188), Expect(3) = 2e-027
Identities = 39/82 (47%), Positives = 51/82 (62%)
Frame = -3 / -2
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE VDVL DD L DG +VVDEHG+L V VG E+EL LV +LLDVLV + + +
Sbjct: 302 AGESFVDVLQDDLRLTDGFSVVDEHGNLAVDGVGFEEELALVPEILLDVLVAQALEAESE 123
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +H RA + L+ + + H
Sbjct: 122 FHPQHVRARPHTQQLQVVSSGH 57
Score = 62.0 bits (129), Expect(4) = 7e-062
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP DPYERA ARFWAAY DDK+ PAW
Sbjct: 306 GPSLLPADPYERAVARFWAAYIDDKMTPAW 395
Score = 42.3 bits (86), Expect(4) = 7e-062
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1 / +3
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E C G FFGGDS+G+VD+VL
Sbjct: 462 LETLEGALRDCGKGKPFFGGDSVGFVDVVL 551
Score = 41.4 bits (84), Expect(3) = 2e-027
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -3 / -2
Query: 435 VPRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
VP + LV+ VG PEAS GA VGV E+ AG
Sbjct: 398 VPSGRHLVIDVGGPEASDGAFVGVSREEGRAG 303
Score = 40.5 bits (82), Expect(4) = 7e-062
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3 / +3
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVP 731
VLG L W A + ++ + +TP LAAW+ERF + V+P
Sbjct: 546 VLGGMLGWVRAADEMHGVKPFDPERTPQLAAWSERFGALEAVEPVMP 686
Score = 35.9 bits (72), Expect(3) = 2e-027
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -1 / -2
Query: 728 HHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQEGAEH 591
HH L + K LRPR Q RS V L + R P + AEH
Sbjct: 683 HHRLHGFQRAKALRPRRQLRSPFRVEGLDAVHLICRAHPPEHAAEH 546
>gb|CW224877.1|CW224877 104_662_11204056_116_37206_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11204056, DNA
sequence
Length = 716
Score = 230 bits (497), Expect(2) = 7e-062
Identities = 93/109 (85%), Positives = 103/109 (94%)
Frame = +1 / +2
Query: 94 ETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPV 273
ETMA KE LK+LGLQ+SPFV+RVC+AL MKGVS+EYVEED++NKSELLLKSNPVHKKVPV
Sbjct: 353 ETMADKEDLKLLGLQLSPFVIRVCMALTMKGVSFEYVEEDLNNKSELLLKSNPVHKKVPV 532
Query: 274 LIHNGKPICESLVIMQYVDELFAGRPILPTDPYERATARFWAAYADDKL 420
LIHNGKPICESLVI+QYVDELFAGR ILP DP+ERATARFWAAY DDK+
Sbjct: 533 LIHNGKPICESLVILQYVDELFAGRSILPADPFERATARFWAAYVDDKV 679
Score = 213 bits (460), Expect(2) = 4e-056
Identities = 92/108 (85%), Positives = 95/108 (87%)
Frame = -3 / -2
Query: 417 LVVGVGSPEASSGALVGVGWEDRPAGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLE 238
LVV VGSPEASSGAL GVGW+DRPA EQLVDVL DDE*L DGLTVVDEHGHLLVHRVGLE
Sbjct: 676 LVVDVGSPEASSGALEGVGWKDRPASEQLVDVLQDDE*LTDGLTVVDEHGHLLVHRVGLE 497
Query: 237 QELTLVGYVLLDVLVTHSFHVQRQAHAEHERAHLQAEDLKTLLARHCF 94
QELTLV VLLDVL THSFH QR AHA+HERA LQAE+LK LL RHCF
Sbjct: 496 QELTLVVQVLLDVLETHSFHGQRHAHADHERAQLQAEELKILLVRHCF 353
Score = 170 bits (366), Expect(2) = 4e-043
Identities = 77/110 (70%), Positives = 80/110 (72%)
Frame = -1 / -3
Query: 422 NNLSSA*AAQKRAVARS*GSVGRIGRPANSSSTYCMMTSDSQMGLPLWMSTGTFLCTGXX 243
+ LSS *AAQKRAVARS GS GRI RPANSSSTYC MTSDSQMGLPLWMSTGTFLCTG
Sbjct: 681 HTLSST*AAQKRAVARSKGSAGRIDRPANSSSTYCRMTSDSQMGLPLWMSTGTFLCTGLD 502
Query: 242 XXXXXXXXXXXXXXXXXLTPFMFSAKHTRSTNGLTCRPRTLRPSLPAIVS 93
LTPFM SA HTR TNGL+CRPR+LR SL AIVS
Sbjct: 501 LSRSSLLLFRSSSTYSKLTPFMVSAMHTRITNGLSCRPRSLRSSLSAIVS 352
Score = 123 bits (263), Expect(2) = 2e-028
Identities = 50/57 (87%), Positives = 51/57 (89%)
Frame = -2 / -1
Query: 295 WAYRCG*ARAPSCAPGWT*AGAHSCWICPPRRTRNSLLSCSAPSTRGARTGSPAGRG 125
WAYRCG*ARAPSCAPGWT*AGAHSC PPRRTRNSLLS SAP TRG+RTGS AGRG
Sbjct: 554 WAYRCG*ARAPSCAPGWT*AGAHSCCSGPPRRTRNSLLSWSAPCTRGSRTGSAAGRG 384
Score = 108 bits (231), Expect(3) = 7e-035
Identities = 46/53 (86%), Positives = 47/53 (88%)
Frame = +3 / +1
Query: 126 PRPAGEPVRAPRVLGAEHERSELRVRRGGHIQQE*APAQVQPGAQEGARAHPQ 284
PRPA EPVR PRV GA+HERSE RVRRGG QQE*APAQVQPGAQEGARAHPQ
Sbjct: 385 PRPAAEPVRDPRVHGADHERSEFRVRRGGPEQQE*APAQVQPGAQEGARAHPQ 543
Score = 50.6 bits (104), Expect(3) = 7e-035
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +2 / +3
Query: 344 AGRSSQPTPTSAPLLASGLPTPTT 415
AGRS QPTP+SAPLLASGLPT TT
Sbjct: 603 AGRSFQPTPSSAPLLASGLPTSTT 674
Score = 29.0 bits (57), Expect(2) = 7e-062
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 5 SLAQTRSKIGLAGY 46
SLAQTRSKIGL Y
Sbjct: 255 SLAQTRSKIGLVSY 296
Score = 28.1 bits (55), Expect(3) = 7e-035
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1 / +2
Query: 7 SCTDSEQDRPSWLQAKNK 60
SCTDSEQDR S L + +
Sbjct: 257 SCTDSEQDRTS*LHTRQE 310
Score = 26.7 bits (52), Expect(2) = 4e-056
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1 / -3
Query: 53 LACNQLGLSCSESVQE 6
L C+ L LSCSESVQ+
Sbjct: 303 LVCS*LVLSCSESVQD 256
Score = 26.3 bits (51), Expect(2) = 4e-043
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2 / -1
Query: 46 VTS*AYLAPSLCK 8
V +*+YLAPSLCK
Sbjct: 296 VAN*SYLAPSLCK 258
Score = 24.0 bits (46), Expect(2) = 2e-028
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / -2
Query: 33 PILLRVCAR 7
PILLRVCAR
Sbjct: 283 PILLRVCAR 257
>gb|CN129302.1|CN129302 RHOH1_34_D09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_D09_A002 5', mRNA sequence
Length = 822
Score = 151 bits (325), Expect(4) = 9e-062
Identities = 61/83 (73%), Positives = 74/83 (89%)
Frame = +1 / +3
Query: 97 TMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVL 276
+MAG + LK+LG+ SP+VLRV LAL++KG+SYEYVEED+ +KSELLLKSNPVH KVPVL
Sbjct: 42 SMAGGDDLKLLGMWASPYVLRVKLALSLKGLSYEYVEEDLRDKSELLLKSNPVHSKVPVL 221
Query: 277 IHNGKPICESLVIMQYVDELFAG 345
IHNGKP+CES VI+QY+DE FAG
Sbjct: 222 IHNGKPVCESQVILQYIDEAFAG 290
Score = 89.0 bits (188), Expect(3) = 2e-027
Identities = 39/82 (47%), Positives = 51/82 (62%)
Frame = -3 / -2
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE VDVL DD L DG +VVDEHG+L V VG E+EL LV +LLDVLV + + +
Sbjct: 290 AGESFVDVLQDDLRLTDGFSVVDEHGNLAVDGVGFEEELALVPEILLDVLVAQALEAESE 111
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +H RA + L+ + + H
Sbjct: 110 FHPQHVRARPHTQQLQVVSSGH 45
Score = 61.6 bits (128), Expect(4) = 9e-062
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP DPYERA ARFWAAY DDK+ PAW
Sbjct: 294 GPSLLPADPYERAIARFWAAYIDDKMTPAW 383
Score = 42.3 bits (86), Expect(4) = 9e-062
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1 / +3
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E C G FFGGDS+G+VD+VL
Sbjct: 450 LETLEGALRDCGKGKPFFGGDSVGFVDVVL 539
Score = 41.4 bits (84), Expect(3) = 2e-027
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -3 / -2
Query: 435 VPRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
VP + LV+ VG PEAS GA VGV E+ AG
Sbjct: 386 VPSGRHLVIDVGGPEASDGAFVGVSREEGRAG 291
Score = 40.5 bits (82), Expect(4) = 9e-062
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3 / +3
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVP 731
VLG L W A + ++ + +TP LAAW+ERF + V+P
Sbjct: 534 VLGGMLGWVRAADEMHGVKPFDPERTPQLAAWSERFGALEAVEPVMP 674
Score = 35.9 bits (72), Expect(3) = 2e-027
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -1 / -2
Query: 728 HHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQEGAEH 591
HH L + K LRPR Q RS V L + R P + AEH
Sbjct: 671 HHRLHGFQRAKALRPRRQLRSPFRVEGLDAVHLICRAHPPEHAAEH 534
>gb|CD428130.1|CD428130 ETH1_32_C09.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_32_C09_A002 5', mRNA sequence
Length = 765
Score = 151 bits (325), Expect(4) = 9e-062
Identities = 61/83 (73%), Positives = 74/83 (89%)
Frame = +1 / +3
Query: 97 TMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVL 276
+MAG + LK+LG+ SP+VLRV LAL++KG+SYEYVEED+ +KSELLLKSNPVH KVPVL
Sbjct: 72 SMAGGDDLKLLGMWASPYVLRVKLALSLKGLSYEYVEEDLRDKSELLLKSNPVHSKVPVL 251
Query: 277 IHNGKPICESLVIMQYVDELFAG 345
IHNGKP+CES VI+QY+DE FAG
Sbjct: 252 IHNGKPVCESQVILQYIDEAFAG 320
Score = 89.0 bits (188), Expect(3) = 2e-027
Identities = 39/82 (47%), Positives = 51/82 (62%)
Frame = -3 / -2
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE VDVL DD L DG +VVDEHG+L V VG E+EL LV +LLDVLV + + +
Sbjct: 320 AGESFVDVLQDDLRLTDGFSVVDEHGNLAVDGVGFEEELALVPEILLDVLVAQALEAESE 141
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +H RA + L+ + + H
Sbjct: 140 FHPQHVRARPHTQQLQVVSSGH 75
Score = 61.6 bits (128), Expect(4) = 9e-062
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP DPYERA ARFWAAY DDK+ PAW
Sbjct: 324 GPSLLPADPYERAIARFWAAYIDDKMTPAW 413
Score = 42.3 bits (86), Expect(4) = 9e-062
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1 / +3
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E C G FFGGDS+G+VD+VL
Sbjct: 480 LETLEGALRDCGKGKPFFGGDSVGFVDVVL 569
Score = 41.4 bits (84), Expect(3) = 2e-027
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -3 / -2
Query: 435 VPRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
VP + LV+ VG PEAS GA VGV E+ AG
Sbjct: 416 VPSGRHLVIDVGGPEASDGAFVGVSREEGRAG 321
Score = 40.5 bits (82), Expect(4) = 9e-062
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3 / +3
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVP 731
VLG L W A + ++ + +TP LAAW+ERF + V+P
Sbjct: 564 VLGGMLGWVRAADEMHGVKPFDPERTPQLAAWSERFGALEAVEPVMP 704
Score = 35.9 bits (72), Expect(3) = 2e-027
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -1 / -2
Query: 728 HHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQEGAEH 591
HH L + K LRPR Q RS V L + R P + AEH
Sbjct: 701 HHRLHGFQRAKALRPRRQLRSPFRVEGLDAVHLICRAHPPEHAAEH 564
>gb|CX610774.1|CX610774 ANR1_20_F02.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_20_F02_A002 5', mRNA sequence
Length = 733
Score = 151 bits (325), Expect(4) = 9e-062
Identities = 61/83 (73%), Positives = 74/83 (89%)
Frame = +1 / +3
Query: 97 TMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVL 276
+MAG + LK+LG+ SP+VLRV LAL++KG+SYEYVEED+ +KSELLLKSNPVH KVPVL
Sbjct: 45 SMAGGDDLKLLGMWASPYVLRVKLALSLKGLSYEYVEEDLRDKSELLLKSNPVHSKVPVL 224
Query: 277 IHNGKPICESLVIMQYVDELFAG 345
IHNGKP+CES VI+QY+DE FAG
Sbjct: 225 IHNGKPVCESQVILQYIDEAFAG 293
Score = 89.0 bits (188), Expect(3) = 3e-027
Identities = 39/82 (47%), Positives = 51/82 (62%)
Frame = -3 / -3
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE VDVL DD L DG +VVDEHG+L V VG E+EL LV +LLDVLV + + +
Sbjct: 293 AGESFVDVLQDDLRLTDGFSVVDEHGNLAVDGVGFEEELALVPEILLDVLVAQALEAESE 114
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +H RA + L+ + + H
Sbjct: 113 FHPQHVRARPHTQQLQVVSSGH 48
Score = 61.6 bits (128), Expect(4) = 9e-062
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP DPYERA ARFWAAY DDK+ PAW
Sbjct: 297 GPSLLPADPYERAIARFWAAYIDDKMTPAW 386
Score = 42.3 bits (86), Expect(4) = 9e-062
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1 / +3
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E C G FFGGDS+G+VD+VL
Sbjct: 453 LETLEGALRDCGKGKPFFGGDSVGFVDVVL 542
Score = 41.4 bits (84), Expect(3) = 3e-027
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -3 / -3
Query: 435 VPRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
VP + LV+ VG PEAS GA VGV E+ AG
Sbjct: 389 VPSGRHLVIDVGGPEASDGAFVGVSREEGRAG 294
Score = 40.5 bits (82), Expect(4) = 9e-062
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3 / +3
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVP 731
VLG L W A + ++ + +TP LAAW+ERF + V+P
Sbjct: 537 VLGGMLGWVRAADEMHGVKPFDPERTPQLAAWSERFGALEAVEPVMP 677
Score = 35.0 bits (70), Expect(3) = 3e-027
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -1 / -3
Query: 728 HHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQEGAEH 591
HH L + K LRPR Q RS V L + R P + AEH
Sbjct: 674 HHGLHGFQRAKALRPRRQLRSPFRVEGLDAVHLICRAHPPEHAAEH 537
>gb|CN143625.1|CN143625 WOUND1_17_A02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_17_A02_A002 5', mRNA sequence
Length = 831
Score = 149 bits (320), Expect(4) = 4e-061
Identities = 61/88 (69%), Positives = 74/88 (84%)
Frame = +1 / +1
Query: 82 YLERETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHK 261
Y +MAG + L +LG+ SP+VLRV LAL++KG+SYEYVEED+ +KSELLLKSNPVH
Sbjct: 43 YPAAPSMAGGDDLHLLGMWASPYVLRVKLALSLKGLSYEYVEEDLRDKSELLLKSNPVHS 222
Query: 262 KVPVLIHNGKPICESLVIMQYVDELFAG 345
KVPVLIHNGKP+CES VI+QY+DE FAG
Sbjct: 223 KVPVLIHNGKPVCESQVILQYIDEAFAG 306
Score = 88.1 bits (186), Expect(3) = 4e-027
Identities = 38/82 (46%), Positives = 51/82 (62%)
Frame = -3 / -1
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE VDVL DD L DG +VVDEHG+L V VG E+EL LV +LLDVLV + + +
Sbjct: 306 AGESFVDVLQDDLRLTDGFSVVDEHGNLAVDGVGFEEELALVPEILLDVLVAQALEAESE 127
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +H RA + ++ + + H
Sbjct: 126 FHPQHVRARPHTQQMQVVSSGH 61
Score = 61.6 bits (128), Expect(4) = 4e-061
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP DPYERA ARFWAAY DDK+ PAW
Sbjct: 310 GPSLLPADPYERAIARFWAAYIDDKMTPAW 399
Score = 42.3 bits (86), Expect(4) = 4e-061
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1 / +1
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E C G FFGGDS+G+VD+VL
Sbjct: 466 LETLEGALRDCGKGKPFFGGDSVGFVDVVL 555
Score = 41.4 bits (84), Expect(3) = 4e-027
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -3 / -1
Query: 435 VPRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
VP + LV+ VG PEAS GA VGV E+ AG
Sbjct: 402 VPSGRHLVIDVGGPEASDGAFVGVSREEGRAG 307
Score = 40.5 bits (82), Expect(4) = 4e-061
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3 / +1
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVP 731
VLG L W A + ++ + +TP LAAW+ERF + V+P
Sbjct: 550 VLGGMLGWVRAADEMHGVKPFDPERTPQLAAWSERFGALEAVEPVMP 690
Score = 35.9 bits (72), Expect(3) = 4e-027
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -1 / -1
Query: 728 HHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQEGAEH 591
HH L + K LRPR Q RS V L + R P + AEH
Sbjct: 687 HHRLHGFQRAKALRPRRQLRSPFRVEGLDAVHLICRAHPPEHAAEH 550
>gb|CW298152.1|CW298152 104_780_11462428_116_35649_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462428, DNA
sequence
Length = 609
Score = 136 bits (292), Expect(4) = 3e-058
Identities = 58/84 (69%), Positives = 71/84 (84%)
Frame = +1 / +2
Query: 94 ETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPV 273
E A + LK+LG+ SP+V RV + LN+KG+SYEYVEED+ NKSELLL+SNPVHKKVPV
Sbjct: 2 EMAAKRGELKLLGVWDSPYVNRVQIVLNLKGLSYEYVEEDLLNKSELLLQSNPVHKKVPV 181
Query: 274 LIHNGKPICESLVIMQYVDELFAG 345
LIH+GKPI ES VI+QY+DE+FAG
Sbjct: 182 LIHDGKPIAESQVIVQYLDEVFAG 253
Score = 88.6 bits (187), Expect(3) = 1e-028
Identities = 43/76 (56%), Positives = 49/76 (64%)
Frame = -3 / -3
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE LV+VL DD L D L VVDEHGHLLVHRVGLE+EL LV V LDVLV + V+
Sbjct: 253 AGEDLVEVLDDDLRLGDRLAVVDEHGHLLVHRVGLEKELALVEEVFLDVLVAEALEVEHD 74
Query: 165 AHAEHERAHLQAEDLK 118
RA A+ L+
Sbjct: 73 LDPVDVRAVPHAQQLQ 26
Score = 67.0 bits (140), Expect(4) = 3e-058
Identities = 26/66 (39%), Positives = 34/66 (51%)
Frame = +1 / +2
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G +LP DPY RATARFWAA+ DDK+ W+ ++ +E +E F
Sbjct: 257 GPSVLPADPYGRATARFWAAFVDDKVGSPWHTILFAREAEKKADAASRIIAALETLEGAF 436
Query: 523 AKCSGG 540
CSGG
Sbjct: 437 RDCSGG 454
Score = 50.1 bits (103), Expect(4) = 3e-058
Identities = 17/35 (48%), Positives = 27/35 (77%)
Frame = +3 / +2
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAER 695
VLGS+L WF+ ++ + +++A++TPLLAAW ER
Sbjct: 503 VLGSYLGWFKVFEKMVGVRVLDAARTPLLAAWGER 607
Score = 44.6 bits (91), Expect(3) = 1e-028
Identities = 25/73 (34%), Positives = 28/73 (38%)
Frame = -1 / -1
Query: 542 LPPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSSA*AAQKRAVARS*GS 363
LPPE S M H LSS AAQKRAVAR *GS
Sbjct: 456 LPPEQSLNAPSSVSSAAMIRDAASAFFSASRANRMVCHGDPTLSSTKAAQKRAVARP*GS 277
Query: 362 VGRIGRPANSSST 324
GR P + ++
Sbjct: 276 AGRTDGPVPAKTS 238
Score = 32.7 bits (65), Expect(3) = 1e-028
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1 / -3
Query: 695 PLRPRSQQRSLASVNDLQVENPAHRLEPEQEGAEH 591
PL PR Q+R V D ++ LEP Q A+H
Sbjct: 607 PLPPRGQERRPRRVQDPDADHLLEHLEPPQVAAQH 503
Score = 30.4 bits (60), Expect(4) = 3e-058
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +1 / +2
Query: 547 FFGGDSIGYVDIVL 588
+FGGD +G+VD+VL
Sbjct: 467 YFGGDGVGFVDVVL 508
>gb|CW290371.1|CW290371 104_769_11412975_116_35553_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11412975, DNA
sequence
Length = 638
Score = 127 bits (271), Expect(4) = 1e-057
Identities = 54/64 (84%), Positives = 58/64 (90%)
Frame = +3 / +2
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVPLPTADMAVQYINK 770
VLGSFLFWFEAVRRV LEII+ASKTPLLAAWAERF G+VEAKEVVP+P AD+AVQYINK
Sbjct: 356 VLGSFLFWFEAVRRVDGLEIIDASKTPLLAAWAERFGGSVEAKEVVPVPEADLAVQYINK 535
Query: 771 LHAP 782
AP
Sbjct: 536 FRAP 547
Score = 126 bits (269), Expect(3) = 3e-047
Identities = 52/63 (82%), Positives = 54/63 (85%)
Frame = -1 / -2
Query: 779 GMKLIDVLYRHVRRGQRHHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQEG 600
G KLIDVLYR VR RHHLLRFY+P KPLRPRSQ+RSLA VNDLQ NPAHRLEPEQEG
Sbjct: 544 GTKLIDVLYRQVRLRHRHHLLRFYTPSKPLRPRSQERSLARVNDLQAVNPAHRLEPEQEG 365
Query: 599 AEH 591
AEH
Sbjct: 364 AEH 356
Score = 114 bits (244), Expect(3) = 6e-034
Identities = 51/62 (82%), Positives = 53/62 (85%)
Frame = -2 / -3
Query: 781 GA*SLLMYCTAMSAVGNGTTSFASTVPTNRSAHAANSGVLLALMISRSKTLRTASNQNKK 602
GA +LLMYCTA SA G GTTSFAST+P NRSAHAA SGVLLA MISR TLRTASNQNKK
Sbjct: 546 GARNLLMYCTAKSASGTGTTSFASTLPPNRSAHAAKSGVLLASMISRPSTLRTASNQNKK 367
Query: 601 EP 596
EP
Sbjct: 366 EP 361
Score = 66.1 bits (138), Expect(4) = 1e-057
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +1 / +1
Query: 331 ELFAGRPILPTDPYERATARFWAAYADDKL 420
ELFAGR ILP DP+ERATARFWAAY DDK+
Sbjct: 1 ELFAGRSILPADPFERATARFWAAYVDDKV 90
Score = 60.2 bits (125), Expect(3) = 3e-047
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = -3 / -3
Query: 417 LVVGVGSPEASSGALVGVGWEDRPAGEQL 331
LVV VGSPEASSGAL GVGW+DRPA EQL
Sbjct: 87 LVVDVGSPEASSGALEGVGWKDRPASEQL 1
Score = 50.6 bits (104), Expect(3) = 6e-034
Identities = 24/30 (80%), Positives = 25/30 (83%)
Frame = -1 / -1
Query: 422 NNLSSA*AAQKRAVARS*GSVGRIGRPANS 333
+ LSS *AAQKRAVARS GS GRI RPANS
Sbjct: 92 HTLSST*AAQKRAVARSKGSAGRIDRPANS 3
Score = 48.3 bits (99), Expect(4) = 1e-057
Identities = 20/41 (48%), Positives = 21/41 (51%)
Frame = +1 / +2
Query: 415 KLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTFAKCSG 537
+LFPAWYGMV IE MEV FAKCSG
Sbjct: 182 QLFPAWYGMVKAQAEEERAEKVKETLAAIEKMEVAFAKCSG 304
Score = 42.8 bits (87), Expect(3) = 3e-047
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = -1 / -3
Query: 536 PEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNN 417
PEHLAK TS+ FTMPYHAGNN
Sbjct: 303 PEHLAKATSIFSIAASVSFTFSALSSSAWAFTMPYHAGNN 184
Score = 40.5 bits (82), Expect(4) = 1e-057
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1 / +2
Query: 532 SGGNAFFGGDSIGYVDIVL 588
+G AFFGGDSIGYVDIVL
Sbjct: 305 NGNAAFFGGDSIGYVDIVL 361
Score = 22.6 bits (43), Expect(3) = 6e-034
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / -2
Query: 444 HHAVPRWKQL 415
HHAVPR +QL
Sbjct: 211 HHAVPRREQL 182
>gb|CD463195.1|CD463195 ETH1_42_D08.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_42_D08_A002 5', mRNA sequence
Length = 721
Score = 123 bits (263), Expect(4) = 2e-056
Identities = 48/74 (64%), Positives = 64/74 (86%)
Frame = +1 / +3
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
LK+LG+ SPFV+R +ALN+KG++Y YVE+D++ KSELLL SNPVH KVPVL+H+G+P+
Sbjct: 75 LKLLGVWSSPFVIRARVALNLKGLAYRYVEDDLNCKSELLLASNPVHTKVPVLLHDGRPV 254
Query: 298 CESLVIMQYVDELF 339
CES VI++YVDE F
Sbjct: 255 CESRVIVEYVDEAF 296
Score = 84.9 bits (179), Expect(4) = 1e-030
Identities = 41/76 (53%), Positives = 50/76 (65%)
Frame = -3 / -3
Query: 339 EQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQAH 160
E LVD+LHDD LADG VV+EH HL VH VG E+EL L V+LDV V + V+R A
Sbjct: 296 EGLVDILHDDPGLADGPAVVEEHRHLGVHGVGGEEELALAVEVVLDVSVGEALEVERDAG 117
Query: 159 AEHERAHLQAEDLKTL 112
++ERA AE L+ L
Sbjct: 116 PDNERARPHAEQLQLL 69
Score = 55.1 bits (114), Expect(4) = 2e-056
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +3 / +3
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVP 731
VLG FL W A + + +I+ +KTPLLAAWA+RF +EV+P
Sbjct: 549 VLGGFLGWLRASEVMCGVRVIDPAKTPLLAAWADRFAALDGVREVIP 689
Score = 50.6 bits (104), Expect(4) = 2e-056
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +1 / +3
Query: 364 DPYERATARFWAAYADDKLFPAW 432
DPY RA ARFWA+Y DDKLF W
Sbjct: 330 DPYRRAVARFWASYVDDKLFTTW 398
Score = 48.7 bits (100), Expect(4) = 2e-056
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1 / +3
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E E F +CSGG AFFGGD+ G VD+VL
Sbjct: 465 LEKFEQAFEECSGGKAFFGGDAAGLVDVVL 554
Score = 38.6 bits (78), Expect(4) = 1e-030
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -1 / -1
Query: 587 STMST*PMESPPKKALPPEHLAKVTS 510
ST ST P SPPK ALPPEH + S
Sbjct: 553 STTSTRPAASPPKNALPPEHSSNACS 476
Score = 36.8 bits (74), Expect(4) = 1e-030
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1 / -3
Query: 731 RHHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQEGAEH 591
R+HL +P+RPR QQR L V++ + R +P +E A H
Sbjct: 689 RYHLPDAVERGEPVRPRRQQRRLGGVDNPHAAHHLGRAQPPEEAA*H 549
Score = 29.9 bits (59), Expect(4) = 1e-030
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3 / -3
Query: 432 PRWKQLVVGVGSPEASSGALVGV 364
P ++LV+ VG PEAS GA V V
Sbjct: 398 PGGEELVIYVGGPEASDGAAVWV 330
>gb|CW095836.1|CW095836 104_461_11001557_148_34328_027 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11001557, DNA
sequence
Length = 583
Score = 130 bits (279), Expect(4) = 1e-055
Identities = 55/76 (72%), Positives = 67/76 (88%)
Frame = +1 / -2
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
LK+LG+ S +V RV + LN+KG+SYEYVEED+ NKSELLL+SNPVHKKVPVLIH+GKPI
Sbjct: 582 LKLLGVWDSLYVNRVQIVLNLKGLSYEYVEEDLLNKSELLLQSNPVHKKVPVLIHDGKPI 403
Query: 298 CESLVIMQYVDELFAG 345
ES VI+QY+DE+FAG
Sbjct: 402 AESQVIVQYLDEVFAG 355
Score = 86.8 bits (183), Expect(3) = 2e-027
Identities = 42/76 (55%), Positives = 49/76 (64%)
Frame = -3 / +1
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE LV+VL DD L D L VVDEHGHLLVHRVGLE+EL LV V LDVLV + V+
Sbjct: 355 AGEDLVEVLDDDLRLGDRLAVVDEHGHLLVHRVGLEKELALVEEVFLDVLVAEALEVEHD 534
Query: 165 AHAEHERAHLQAEDLK 118
+A A+ L+
Sbjct: 535 LDPVDVQAVPHAQQLQ 582
Score = 64.3 bits (134), Expect(4) = 1e-055
Identities = 25/66 (37%), Positives = 33/66 (50%)
Frame = +1 / -2
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G +LP DPY RATAR WAA+ DDK+ W+ ++ +E +E F
Sbjct: 351 GPSVLPADPYGRATARLWAAFVDDKVGSPWHTILFAREAEKKADAASRIIAALETLEGAF 172
Query: 523 AKCSGG 540
CSGG
Sbjct: 171 RDCSGG 154
Score = 50.1 bits (103), Expect(4) = 1e-055
Identities = 17/35 (48%), Positives = 27/35 (77%)
Frame = +3 / -2
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAER 695
VLGS+L WF+ ++ + +++A++TPLLAAW ER
Sbjct: 105 VLGSYLGWFKVFEKMVGVRVLDAARTPLLAAWGER 1
Score = 42.3 bits (86), Expect(3) = 2e-027
Identities = 24/73 (32%), Positives = 27/73 (36%)
Frame = -1 / +2
Query: 542 LPPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSSA*AAQKRAVARS*GS 363
LPPE S M H LSS AA KRAVAR *GS
Sbjct: 152 LPPEQSLNAPSSVSSAAMIRDAASAFFSASRANRMVCHGDPTLSSTKAAHKRAVARP*GS 331
Query: 362 VGRIGRPANSSST 324
GR P + ++
Sbjct: 332 AGRTDGPVPAKTS 370
Score = 32.7 bits (65), Expect(3) = 2e-027
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1 / +1
Query: 695 PLRPRSQQRSLASVNDLQVENPAHRLEPEQEGAEH 591
PL PR Q+R V D ++ LEP Q A+H
Sbjct: 1 PLPPRGQERRPRRVQDPDADHLLEHLEPPQVAAQH 105
Score = 30.4 bits (60), Expect(4) = 1e-055
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +1 / -2
Query: 547 FFGGDSIGYVDIVL 588
+FGGD +G+VD+VL
Sbjct: 141 YFGGDGVGFVDVVL 100
>gb|CD430702.1|CD430702 ETH1_20_G03.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_20_G03_A002 5', mRNA sequence
Length = 600
Score = 151 bits (325), Expect(3) = 4e-055
Identities = 61/83 (73%), Positives = 74/83 (89%)
Frame = +1 / +2
Query: 97 TMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVL 276
+MAG + LK+LG+ SP+VLRV LAL++KG+SYEYVEED+ +KSELLLKSNPVH KVPVL
Sbjct: 74 SMAGGDDLKLLGMWASPYVLRVKLALSLKGLSYEYVEEDLRDKSELLLKSNPVHSKVPVL 253
Query: 277 IHNGKPICESLVIMQYVDELFAG 345
IHNGKP+CES VI+QY+DE FAG
Sbjct: 254 IHNGKPVCESQVILQYIDEAFAG 322
Score = 89.0 bits (188), Expect(2) = 3e-023
Identities = 39/82 (47%), Positives = 51/82 (62%)
Frame = -3 / -3
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE VDVL DD L DG +VVDEHG+L V VG E+EL LV +LLDVLV + + +
Sbjct: 322 AGESFVDVLQDDLRLTDGFSVVDEHGNLAVDGVGFEEELALVPEILLDVLVAQALEAESE 143
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +H RA + L+ + + H
Sbjct: 142 FHPQHVRARPHTQQLQVVSSGH 77
Score = 61.6 bits (128), Expect(3) = 4e-055
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = +1 / +2
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP DPYERA ARFWAAY DDK+ PAW
Sbjct: 326 GPSLLPADPYERAIARFWAAYIDDKMTPAW 415
Score = 42.3 bits (86), Expect(3) = 4e-055
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1 / +2
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E C G FFGGDS+G+VD+VL
Sbjct: 482 LETLEGALRDCGKGKPFFGGDSVGFVDVVL 571
Score = 41.4 bits (84), Expect(2) = 3e-023
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -3 / -3
Query: 435 VPRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
VP + LV+ VG PEAS GA VGV E+ AG
Sbjct: 418 VPSGRHLVIDVGGPEASDGAFVGVSREEGRAG 323
>gb|BZ626753.1|BZ626753 ih48b09.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih48b09 5', DNA sequence
Length = 785
Score = 141 bits (303), Expect(4) = 2e-054
Identities = 57/75 (76%), Positives = 67/75 (89%)
Frame = +1 / -1
Query: 121 KVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPIC 300
K+LG+ SP+VLRV LAL+ KG+SYEYVEED+ +KSELLLKSNPVH KVPVLIHNGKP+C
Sbjct: 785 KLLGMWASPYVLRVKLALSSKGLSYEYVEEDLRDKSELLLKSNPVHSKVPVLIHNGKPVC 606
Query: 301 ESLVIMQYVDELFAG 345
ES VI+QY+DE FAG
Sbjct: 605 ESQVILQYIDEAFAG 561
Score = 84.0 bits (177), Expect(3) = 5e-025
Identities = 38/75 (50%), Positives = 47/75 (62%)
Frame = -3 / +3
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE VDVL DD L DG +VVDEHG+L V VG E+EL LV +LLDVLV + + +
Sbjct: 561 AGESFVDVLQDDLRLTDGFSVVDEHGNLAVDGVGFEEELALVPEILLDVLVAQAL*AESE 740
Query: 165 AHAEHERAHLQAEDL 121
H +H RA + L
Sbjct: 741 FHPQHVRARPHTQQL 785
Score = 51.9 bits (107), Expect(4) = 2e-054
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +1 / -1
Query: 343 GRPILPTDPYERATARFWAAYADDKL 420
G +LP DPYERA ARFWAAY DDK+
Sbjct: 557 GPSLLPADPYERAIARFWAAYIDDKV 480
Score = 42.3 bits (86), Expect(4) = 2e-054
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1 / -3
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E C G FFGGDS+G+VD+VL
Sbjct: 258 LETLEGALRDCGKGKPFFGGDSVGFVDVVL 169
Score = 40.5 bits (82), Expect(4) = 2e-054
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3 / -3
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVP 731
VLG L W A + ++ + +TP LAAW+ERF + V+P
Sbjct: 174 VLGGMLGWVRAADEMHGVKPFDPERTPQLAAWSERFGALEAVEPVMP 34
Score = 38.2 bits (77), Expect(3) = 5e-025
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -1 / +1
Query: 416 LSSA*AAQKRAVARS*GSVGRIGRPANSSST 324
LSS *AAQKRA+ARS*GS GR P + ++
Sbjct: 484 LSSM*AAQKRAMARS*GSAGRRDGPVPAKAS 576
Score = 35.9 bits (72), Expect(3) = 5e-025
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -1 / +1
Query: 728 HHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQEGAEH 591
HH L + K LRPR Q RS V L + R P + AEH
Sbjct: 37 HHRLHGFQRAKALRPRRQLRSPFRVEGLDAVHLICRAHPPEHAAEH 174
>gb|CD432214.1|CD432214 ETH1_26_E09.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_26_E09_A002 5', mRNA sequence
Length = 689
Score = 138 bits (295), Expect(4) = 5e-054
Identities = 54/78 (69%), Positives = 70/78 (89%)
Frame = +1 / +3
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
L +LGL VSPF LRV +AL++KG+SYEYVE+D+ +KS+LLL SNPVHKKVPVLIHNGKPI
Sbjct: 102 LTLLGLHVSPFALRVRMALDLKGLSYEYVEQDLFHKSDLLLTSNPVHKKVPVLIHNGKPI 281
Query: 298 CESLVIMQYVDELFAGRP 351
CESLV+++Y++E++ G P
Sbjct: 282 CESLVVLEYLEEVWPGPP 335
Score = 109 bits (233), Expect(3) = 3e-033
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -3 / -1
Query: 342 GEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQA 163
G L +VL DDE LADGL VVDEHG LLVH VG E+E+ LV VLLDVLV + VQR A
Sbjct: 326 GPDLFEVLQDDERLADGLAVVDEHGDLLVHGVGGEEEVALVEQVLLDVLVAQALQVQRHA 147
Query: 162 HAEHERAHLQAEDLKTLL 109
HA+ ERAH+QA+ +T L
Sbjct: 146 HAKRERAHVQAQQCQTTL 93
Score = 67.0 bits (140), Expect(4) = 5e-054
Identities = 27/67 (40%), Positives = 34/67 (50%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G ILP DPY RA ARFWAAY D KLFPAW ++ + ++E F
Sbjct: 348 GAAILPADPYGRAVARFWAAYIDGKLFPAWVDVMKAATEEERAEKVKETHAAVLNLEKAF 527
Query: 523 AKCSGGN 543
A+ + N
Sbjct: 528 AEITSSN 548
Score = 64.3 bits (134), Expect(3) = 2e-023
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = -1 / -2
Query: 350 GRPANSSSTYCMMTSDSQMGLPLWMSTGTFLCTG 249
G P +SS Y T DSQMGLPLWMSTGTFLCTG
Sbjct: 334 GGPGQTSSRYSRTTRDSQMGLPLWMSTGTFLCTG 233
Score = 46.9 bits (96), Expect(3) = 3e-033
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -1 / -2
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRP 342
HAGN+L S *AAQKRA AR *GS GR+ P
Sbjct: 436 HAGNSLPSM*AAQKRATARP*GSAGRMAAP 347
Score = 46.4 bits (95), Expect(3) = 2e-023
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = -3 / -1
Query: 444 HHAVPRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
H PR +QL V VG PEAS GA VGV ED AG
Sbjct: 449 HDVYPRREQLAVDVGGPEASDGAAVGVSGEDGCAG 345
Score = 39.6 bits (80), Expect(4) = 5e-054
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1 / +3
Query: 547 FFGGDSIGYVDIVLTCSAP 603
FFGGDS+GY+D+ L CS P
Sbjct: 582 FFGGDSVGYLDLALGCSLP 638
Score = 37.7 bits (76), Expect(3) = 2e-023
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = -1 / -2
Query: 185 PFMFSAKHTRSTNGLTCRPRTLRPSLPAIVSLSRYIFPLPLYLF 54
PF SA TRS GLTCRP ++R ++++ S L Y F
Sbjct: 169 PFRSSAMRTRSAKGLTCRPSSVRRPSASLLTASAIDGCLLAYAF 38
Score = 29.0 bits (57), Expect(3) = 3e-033
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1 / -2
Query: 602 GAEHVSTMST*PMESPPKK 546
G EH S S P ESPPKK
Sbjct: 637 GREHPSARSRYPTESPPKK 581
Score = 25.4 bits (49), Expect(4) = 5e-054
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1 / +1
Query: 595 SAPSCSGSRRCAGFSTWRSLTL 660
S C GS RCA S RS TL
Sbjct: 622 SGAPCRGSGRCAPCSASRSSTL 687
>gb|CW215449.1|CW215449 104_647_11194545_116_37165_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194545, DNA
sequence
Length = 691
Score = 109 bits (233), Expect(4) = 2e-053
Identities = 41/54 (75%), Positives = 50/54 (92%)
Frame = +1 / -3
Query: 178 MKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPICESLVIMQYVDELF 339
+KG+SYEYVEED+ NKS+LLL SNPVHKKVPVLIH+GKP+CES VI+ Y+DE+F
Sbjct: 683 LKGLSYEYVEEDVKNKSQLLLASNPVHKKVPVLIHDGKPVCESQVIVHYIDEVF 522
Score = 78.0 bits (164), Expect(3) = 7e-024
Identities = 34/55 (61%), Positives = 41/55 (74%)
Frame = -3 / +3
Query: 339 EQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHV 175
E +DV+HDD * ADGL VVDEHGHLLV+ +G E+EL LV VLLDVLV + +
Sbjct: 522 EDFIDVVHDDL*FADGLPVVDEHGHLLVNGIGREEELALVLDVLLDVLVAQALEL 686
Score = 57.0 bits (118), Expect(4) = 2e-053
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -3
Query: 340 AGRPILPTDPYERATARFWAAYADDKL 420
AG +LP DPYERATARFWAAY DDK+
Sbjct: 506 AGPSLLPADPYERATARFWAAYVDDKV 426
Score = 54.7 bits (113), Expect(4) = 2e-053
Identities = 18/36 (50%), Positives = 29/36 (80%)
Frame = +3 / -2
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERF 698
VLG +L WF+ + ++ + +++A++TPLLAAWAERF
Sbjct: 177 VLGGYLGWFDVLEKMIGVRVLDAARTPLLAAWAERF 70
Score = 46.4 bits (95), Expect(4) = 2e-053
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1 / -2
Query: 427 AWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
AW M+ +E +E F CS G +FGGD+ GY+D+VL
Sbjct: 333 AWRTMLFAGETDEKMDGAAQAIAALETLESAFQDCSKGKGYFGGDTAGYMDVVL 172
Score = 39.1 bits (79), Expect(3) = 7e-024
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = -1 / +1
Query: 416 LSSA*AAQKRAVARS*GSVGRIGRPA 339
LSS AAQKRAVARS*GS GR PA
Sbjct: 430 LSSTYAAQKRAVARS*GSAGRSEGPA 507
Score = 36.8 bits (74), Expect(3) = 7e-024
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1 / +1
Query: 698 KPLRPRSQQRSLASVNDLQVENPAHRLEPEQEGAEH 591
+PLRPR Q+R + D ++ +EP Q AEH
Sbjct: 70 EPLRPRGQERRPRRIQDSDADHLLQHIEPPQVAAEH 177
>gb|CD431749.1|CD431749 ETH1_10_F11.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_10_F11_A002 5', mRNA sequence
Length = 667
Score = 131 bits (281), Expect(4) = 3e-053
Identities = 55/76 (72%), Positives = 63/76 (82%)
Frame = +1 / +2
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
LK++G S FV RV LAL++KG+SYEYVEED+ NKS LLL NPVHK VPVLIHNGKPI
Sbjct: 74 LKLIGQYGSAFVTRVKLALHLKGLSYEYVEEDLRNKSALLLSCNPVHKAVPVLIHNGKPI 253
Query: 298 CESLVIMQYVDELFAG 345
CES VI+QY+DE FAG
Sbjct: 254 CESQVILQYIDEAFAG 301
Score = 50.6 bits (104), Expect(4) = 3e-053
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1 / +2
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP DP+ER+ ARFW AY +DKL W
Sbjct: 305 GPSLLPADPFERSVARFWTAYIEDKLVTPW 394
Score = 46.4 bits (95), Expect(4) = 3e-053
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1 / +2
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E +CS G FFGGDS+GYVD+VL
Sbjct: 461 VETLEGGLKECSKGKPFFGGDSVGYVDVVL 550
Score = 38.6 bits (78), Expect(4) = 3e-053
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3 / +2
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERF 698
VLG + + + +F ++ +A KTPLLAAW ERF
Sbjct: 545 VLGGAVSYAKGHDALFGAKLFDAEKTPLLAAWMERF 652
>gb|CW183587.1|CW183587 104_599_11164694_148_36677_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164694, DNA
sequence
Length = 688
Score = 138 bits (295), Expect(3) = 7e-052
Identities = 54/78 (69%), Positives = 70/78 (89%)
Frame = +1 / +3
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
L +LGL VSPF LRV +AL++KG+SYEYVE+D+ +KS+LLL SNPVHKKVPVLIHNGKPI
Sbjct: 120 LTLLGLHVSPFALRVRMALDLKGLSYEYVEQDLFHKSDLLLTSNPVHKKVPVLIHNGKPI 299
Query: 298 CESLVIMQYVDELFAGRP 351
CESLV+++Y++E++ G P
Sbjct: 300 CESLVVLEYLEEVWPGPP 353
Score = 109 bits (232), Expect(3) = 5e-033
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -3 / -3
Query: 342 GEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQA 163
G L +VL DDE LADGL VVDEHG LLVH VG E+E+ LV VLLDVLV + VQR A
Sbjct: 344 GPDLFEVLQDDERLADGLAVVDEHGDLLVHGVGGEEEVALVEQVLLDVLVAQALQVQRHA 165
Query: 162 HAEHERAHLQAEDLKTLL 109
HA+ ERAH+QA+ +T L
Sbjct: 164 HAKRERAHVQAQQRQTTL 111
Score = 67.0 bits (140), Expect(3) = 7e-052
Identities = 27/67 (40%), Positives = 34/67 (50%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G ILP DPY RA ARFWAAY D KLFPAW ++ + ++E F
Sbjct: 366 GAAILPADPYGRAVARFWAAYIDGKLFPAWVDVMKAATEEERAEKVKETHAAVLNLEKAF 545
Query: 523 AKCSGGN 543
A+ + N
Sbjct: 546 AEITSSN 566
Score = 64.3 bits (134), Expect(3) = 2e-023
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = -1 / -1
Query: 350 GRPANSSSTYCMMTSDSQMGLPLWMSTGTFLCTG 249
G P +SS Y T DSQMGLPLWMSTGTFLCTG
Sbjct: 352 GGPGQTSSRYSRTTRDSQMGLPLWMSTGTFLCTG 251
Score = 46.9 bits (96), Expect(3) = 5e-033
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -1 / -1
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRP 342
HAGN+L S *AAQKRA AR *GS GR+ P
Sbjct: 454 HAGNSLPSM*AAQKRATARP*GSAGRMAAP 365
Score = 46.4 bits (95), Expect(3) = 2e-023
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = -3 / -3
Query: 444 HHAVPRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
H PR +QL V VG PEAS GA VGV ED AG
Sbjct: 467 HDVYPRREQLAVDVGGPEASDGAAVGVSGEDGCAG 363
Score = 39.6 bits (80), Expect(3) = 7e-052
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1 / +3
Query: 547 FFGGDSIGYVDIVLTCSAP 603
FFGGDS+GY+D+ L CS P
Sbjct: 600 FFGGDSVGYLDLALGCSLP 656
Score = 37.7 bits (76), Expect(3) = 2e-023
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = -1 / -1
Query: 185 PFMFSAKHTRSTNGLTCRPRTLRPSLPAIVSLSRYIFPLPLYLF 54
PF SA TRS GLTCRP ++R ++++ S L Y F
Sbjct: 187 PFRSSAMRTRSAKGLTCRPSSVRRPSASLLTASAIDGCLLAYAF 56
Score = 29.0 bits (57), Expect(3) = 5e-033
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1 / -1
Query: 602 GAEHVSTMST*PMESPPKK 546
G EH S S P ESPPKK
Sbjct: 655 GREHPSARSRYPTESPPKK 599
>gb|CN138744.1|CN138744 OX1_13_D12.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_13_D12_A002 5', mRNA sequence
Length = 608
Score = 139 bits (298), Expect(2) = 7e-052
Identities = 55/74 (74%), Positives = 66/74 (89%)
Frame = +1 / +1
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
LK+LGL SPFV+R LALN+KG+SYEYVEED+ NKS+LLL SNPVHKKVPVLIH+GKP+
Sbjct: 130 LKLLGLWTSPFVIRARLALNLKGLSYEYVEEDVKNKSQLLLASNPVHKKVPVLIHDGKPV 309
Query: 298 CESLVIMQYVDELF 339
CES VI+ Y+DE+F
Sbjct: 310 CESQVIVHYIDEVF 351
Score = 95.9 bits (203), Expect(2) = 8e-025
Identities = 44/78 (56%), Positives = 55/78 (70%)
Frame = -3 / -3
Query: 339 EQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQAH 160
E +DV+HDD * ADGL VVDEHGHLLV+ +G E+EL LV VLLDVLV + V+R+A
Sbjct: 351 EDFIDVVHDDL*FADGLPVVDEHGHLLVNGIGREEELALVLDVLLDVLVAQALEVEREAC 172
Query: 159 AEHERAHLQAEDLKTLLA 106
+HERA A+ L+ A
Sbjct: 171 PDHERAGP*AQQLQLAAA 118
Score = 86.8 bits (183), Expect(2) = 7e-052
Identities = 35/80 (43%), Positives = 43/80 (53%)
Frame = +1 / +1
Query: 340 AGRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVT 519
AG +LP DPYERATARFWAAY DK+ AW M+ +E +E
Sbjct: 367 AGPSLLPADPYERATARFWAAYVYDKVGSAWRTMLIAGETDDKMDGAAQAIAALETLESA 546
Query: 520 FAKCSGGNAFFGGDSIGYVD 579
F CS G +F GD+ GY+D
Sbjct: 547 FQDCSKGKGYFSGDTAGYMD 606
Score = 39.6 bits (80), Expect(2) = 8e-025
Identities = 21/31 (67%), Positives = 21/31 (67%)
Frame = -1 / -1
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRPA 339
HA LS AAQKRAVARS*GS GR PA
Sbjct: 458 HADPTLS*TYAAQKRAVARS*GSAGRSEGPA 366
>gb|CN134649.1|CN134649 OX1_27_D04.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_D04_A002 5', mRNA sequence
Length = 759
Score = 151 bits (325), Expect(3) = 8e-052
Identities = 61/83 (73%), Positives = 74/83 (89%)
Frame = +1 / +2
Query: 97 TMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVL 276
+MAG + LK+LG+ SP+VLRV LAL++KG+SYEYVEED+ +KSELLLKSNPVH KVPVL
Sbjct: 53 SMAGGDDLKLLGMWASPYVLRVKLALSLKGLSYEYVEEDLRDKSELLLKSNPVHSKVPVL 232
Query: 277 IHNGKPICESLVIMQYVDELFAG 345
IHNGKP+CES VI+QY+DE FAG
Sbjct: 233 IHNGKPVCESQVILQYIDEAFAG 301
Score = 89.0 bits (188), Expect(3) = 9e-025
Identities = 39/82 (47%), Positives = 51/82 (62%)
Frame = -3 / -3
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE VDVL DD L DG +VVDEHG+L V VG E+EL LV +LLDVLV + + +
Sbjct: 301 AGESFVDVLQDDLRLTDGFSVVDEHGNLAVDGVGFEEELALVPEILLDVLVAQALEAESE 122
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +H RA + L+ + + H
Sbjct: 121 FHPQHVRARPHTQQLQVVSSGH 56
Score = 61.6 bits (128), Expect(3) = 8e-052
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = +1 / +2
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP DPYERA ARFWAAY DDK+ PAW
Sbjct: 305 GPSLLPADPYERAIARFWAAYIDDKMTPAW 394
Score = 41.4 bits (84), Expect(3) = 9e-025
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -3 / -3
Query: 435 VPRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
VP + LV+ VG PEAS GA VGV E+ AG
Sbjct: 397 VPSGRHLVIDVGGPEASDGAFVGVSREEGRAG 302
Score = 35.4 bits (71), Expect(3) = 8e-052
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3 / +2
Query: 597 GSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVP 731
G L W A + ++ + +TP LAAW+ERF V+P
Sbjct: 494 GGMLGWVRAADEMHGVKPFDPERTPQLAAWSERFGALEAVVPVMP 628
Score = 26.7 bits (52), Expect(3) = 9e-025
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = -1 / -3
Query: 728 HHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQEGA 597
HH + K LRPR Q RS V L + R P + A
Sbjct: 625 HHRHHGFQRAKALRPRRQLRSPFRVEGLDAVHLICRAHPPEHAA 494
>gb|CD432560.1|CD432560 ETH1_30_D08.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_30_D08_A002 5', mRNA sequence
Length = 730
Score = 144 bits (308), Expect(3) = 2e-051
Identities = 57/84 (67%), Positives = 72/84 (85%)
Frame = +1 / +1
Query: 88 ERETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKV 267
+ + MAG + LK+LG SPFVLR LAL+ KG+SYEYVEED+ NKS+LLL+SNPVHKKV
Sbjct: 193 QHQQMAGGDELKLLGFWGSPFVLRARLALSFKGLSYEYVEEDLKNKSQLLLQSNPVHKKV 372
Query: 268 PVLIHNGKPICESLVIMQYVDELF 339
PVLIHNGKP+CE+ +IMQY+DE++
Sbjct: 373 PVLIHNGKPVCETKIIMQYLDEVY 444
Score = 91.3 bits (193), Expect(2) = 7e-023
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = -3 / -2
Query: 333 LVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQAHAE 154
LV VLHDD LADGL VVDEHG+LLVHRVGLE++L LV +LLD+LV + Q + ++
Sbjct: 438 LV*VLHDDLGLADGLAVVDEHGNLLVHRVGLEKKLALVLEILLDILVAQTLKAQGKPRSQ 259
Query: 153 HERAHLQAEDLKTLLARHCFPL 88
+ERA +A L+ + + H L
Sbjct: 258 NERAPPKA*QLQLISSSHLLML 193
Score = 51.9 bits (107), Expect(3) = 2e-051
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKL 420
G +LP DPY+RA ARFWAAY DDKL
Sbjct: 445 GPSLLPADPYDRAMARFWAAYIDDKL 522
Score = 47.3 bits (97), Expect(3) = 2e-051
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1 / +1
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E +CS G FFGGDS+GYVD+VL
Sbjct: 601 VETLERALKECSKGKPFFGGDSVGYVDVVL 690
Score = 37.7 bits (76), Expect(2) = 7e-023
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = -1 / -3
Query: 422 NNLSSA*AAQKRAVARS*GSVGRIGRPANSS 330
++LSS *AAQKRA+ARS GS GR P SS
Sbjct: 524 DSLSSM*AAQKRAMARSYGSAGRREGP*TSS 432
>gb|CN134135.1|CN134135 OX1_20_B02.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_20_B02_A002 5', mRNA sequence
Length = 687
Score = 123 bits (263), Expect(5) = 5e-049
Identities = 48/74 (64%), Positives = 64/74 (86%)
Frame = +1 / +3
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
LK+LG+ SPFV+R +ALN+KG++Y YVE+D++ KSELLL SNPVH KVPVL+H+G+P+
Sbjct: 39 LKLLGVWSSPFVIRARVALNLKGLAYRYVEDDLNCKSELLLASNPVHTKVPVLLHDGRPV 218
Query: 298 CESLVIMQYVDELF 339
CES VI++YVDE F
Sbjct: 219 CESRVIVEYVDEAF 260
Score = 84.9 bits (179), Expect(4) = 1e-025
Identities = 41/76 (53%), Positives = 50/76 (65%)
Frame = -3 / -2
Query: 339 EQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQAH 160
E LVD+LHDD LADG VV+EH HL VH VG E+EL L V+LDV V + V+R A
Sbjct: 260 EGLVDILHDDPGLADGPAVVEEHRHLGVHGVGGEEELALAVEVVLDVSVGEALEVERDAG 81
Query: 159 AEHERAHLQAEDLKTL 112
++ERA AE L+ L
Sbjct: 80 PDNERARPHAEQLQLL 33
Score = 50.6 bits (104), Expect(5) = 5e-049
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +1 / +3
Query: 364 DPYERATARFWAAYADDKLFPAW 432
DPY RA ARFWA+Y DDKLF W
Sbjct: 294 DPYRRAVARFWASYVDDKLFTTW 362
Score = 41.8 bits (85), Expect(5) = 5e-049
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3 / +2
Query: 642 LEIINASKTPLLAAWAERFVGTVEAKEVVP 731
+ +I+ +KTPLLAAWA+RF +EV+P
Sbjct: 566 VRVIDPAKTPLLAAWADRFAALDGVREVIP 655
Score = 33.1 bits (66), Expect(4) = 1e-025
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -2 / -1
Query: 733 NGTTSFASTVPTNRSAHAANSGVL 662
+G TS + NRSAHAA+SGVL
Sbjct: 657 SGITSLTPSSAANRSAHAASSGVL 586
Score = 31.3 bits (62), Expect(5) = 5e-049
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1 / +3
Query: 499 IEHMEVTFAKCSGGNAFFG 555
+E E F +CSGG AFFG
Sbjct: 429 LEKFEQAFEECSGGKAFFG 485
Score = 29.9 bits (59), Expect(4) = 1e-025
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3 / -2
Query: 432 PRWKQLVVGVGSPEASSGALVGV 364
P ++LV+ VG PEAS GA V V
Sbjct: 362 PGGEELVIYVGGPEASDGAAVWV 294
Score = 25.4 bits (49), Expect(4) = 1e-025
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 554 PKKALPPEHLAKVTS 510
PK ALPPEH + S
Sbjct: 484 PKNALPPEHSSNACS 440
Score = 23.5 bits (45), Expect(5) = 5e-049
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1 / +1
Query: 535 GGNAFFGGDSIGYVDIVL 588
G GGD+ G VD+VL
Sbjct: 466 GARRSSGGDAAGLVDVVL 519
>gb|BE358825.1|BE358825 DG1_32_D11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 427
Score = 151 bits (325), Expect(2) = 5e-048
Identities = 61/83 (73%), Positives = 74/83 (89%)
Frame = +1 / +1
Query: 97 TMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVL 276
+MAG + LK+LG+ SP+VLRV LAL++KG+SYEYVEED+ +KSELLLKSNPVH KVPVL
Sbjct: 61 SMAGGDDLKLLGMWASPYVLRVKLALSLKGLSYEYVEEDLRDKSELLLKSNPVHSKVPVL 240
Query: 277 IHNGKPICESLVIMQYVDELFAG 345
IHNGKP+CES VI+QY+DE FAG
Sbjct: 241 IHNGKPVCESQVILQYIDEAFAG 309
Score = 89.0 bits (188), Expect(2) = 3e-023
Identities = 39/82 (47%), Positives = 51/82 (62%)
Frame = -3 / -2
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE VDVL DD L DG +VVDEHG+L V VG E+EL LV +LLDVLV + + +
Sbjct: 309 AGESFVDVLQDDLRLTDGFSVVDEHGNLAVDGVGFEEELALVPEILLDVLVAQALEAESE 130
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +H RA + L+ + + H
Sbjct: 129 FHPQHVRARPHTQQLQVVSSGH 64
Score = 61.6 bits (128), Expect(2) = 5e-048
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP DPYERA ARFWAAY DDK+ PAW
Sbjct: 313 GPSLLPADPYERAIARFWAAYIDDKMTPAW 402
Score = 41.4 bits (84), Expect(2) = 3e-023
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -3 / -2
Query: 435 VPRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
VP + LV+ VG PEAS GA VGV E+ AG
Sbjct: 405 VPSGRHLVIDVGGPEASDGAFVGVSREEGRAG 310
>gb|CD428784.1|CD428784 ETH1_36_F06.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_36_F06_A002 3', mRNA sequence
Length = 601
Score = 127 bits (271), Expect(4) = 7e-048
Identities = 54/64 (84%), Positives = 58/64 (90%)
Frame = +3 / +3
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVPLPTADMAVQYINK 770
VLGSFLFWFEAVRRV LEII+ASKTPLLAAWAERF G+VEAKEVVP+P AD+AVQYINK
Sbjct: 195 VLGSFLFWFEAVRRVDGLEIIDASKTPLLAAWAERFGGSVEAKEVVPVPEADLAVQYINK 374
Query: 771 LHAP 782
AP
Sbjct: 375 FRAP 386
Score = 126 bits (269), Expect(3) = 8e-039
Identities = 52/63 (82%), Positives = 54/63 (85%)
Frame = -1 / -3
Query: 779 GMKLIDVLYRHVRRGQRHHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQEG 600
G KLIDVLYR VR RHHLLRFY+P KPLRPRSQ+RSLA VNDLQ NPAHRLEPEQEG
Sbjct: 383 GTKLIDVLYRQVRLRHRHHLLRFYTPSKPLRPRSQERSLARVNDLQAVNPAHRLEPEQEG 204
Query: 599 AEH 591
AEH
Sbjct: 203 AEH 195
Score = 114 bits (244), Expect(2) = 2e-027
Identities = 51/62 (82%), Positives = 53/62 (85%)
Frame = -2 / -1
Query: 781 GA*SLLMYCTAMSAVGNGTTSFASTVPTNRSAHAANSGVLLALMISRSKTLRTASNQNKK 602
GA +LLMYCTA SA G GTTSFAST+P NRSAHAA SGVLLA MISR TLRTASNQNKK
Sbjct: 385 GARNLLMYCTAKSASGTGTTSFASTLPPNRSAHAAKSGVLLASMISRPSTLRTASNQNKK 206
Query: 601 EP 596
EP
Sbjct: 205 EP 200
Score = 62.5 bits (130), Expect(4) = 7e-048
Identities = 26/47 (55%), Positives = 26/47 (55%)
Frame = +1 / +3
Query: 397 AAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTFAKCSG 537
AAY DDKLFPAWYGMV IE MEV FAKCSG
Sbjct: 3 AAYVDDKLFPAWYGMVKAQAEEERAEKVKETLAAIEKMEVAFAKCSG 143
Score = 52.4 bits (108), Expect(3) = 8e-039
Identities = 24/47 (51%), Positives = 25/47 (53%)
Frame = -1 / -1
Query: 536 PEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSSA*AA 396
PEHLAK TS+ FTMPYHAGNNLSS *AA
Sbjct: 142 PEHLAKATSIFSIAASVSFTFSALSSSAWAFTMPYHAGNNLSST*AA 2
Score = 40.5 bits (82), Expect(4) = 7e-048
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1 / +3
Query: 532 SGGNAFFGGDSIGYVDIVL 588
+G AFFGGDSIGYVDIVL
Sbjct: 144 NGNAAFFGGDSIGYVDIVL 200
Score = 32.2 bits (64), Expect(2) = 2e-027
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3 / -3
Query: 444 HHAVPRWKQLVVGVGS 397
HHAVPR +QLVV VGS
Sbjct: 50 HHAVPRREQLVVDVGS 3
Score = 23.1 bits (44), Expect(4) = 7e-048
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / +2
Query: 935 SRLLCNKY 958
SRLLCNKY
Sbjct: 575 SRLLCNKY 598
Score = 22.1 bits (42), Expect(3) = 8e-039
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 897 NISFEHYSVGI 865
+ F+HYSVGI
Sbjct: 515 SFKFQHYSVGI 483
>gb|CL157162.1|CL157162 104_344_10783358_114_31373_302 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10783358, DNA
sequence
Length = 706
Score = 101 bits (216), Expect(4) = 2e-047
Identities = 37/58 (63%), Positives = 51/58 (87%)
Frame = +1 / -3
Query: 169 ALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPICESLVIMQYVDELFA 342
AL +KGV YE+++E KSELLLKSNPV+KK+PVL+H+G PICES++I+QY+DE++A
Sbjct: 704 ALKLKGVEYEFLQEPAGRKSELLLKSNPVYKKIPVLLHHGNPICESMIIIQYIDEVWA 531
Score = 50.6 bits (104), Expect(4) = 2e-047
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = +1 / -3
Query: 352 ILPTDPYERATARFWAAYADDKLFPAWY 435
ILPTDPY RA RFWA Y DDK+F Y
Sbjct: 515 ILPTDPYARANERFWAQYVDDKVFDFSY 432
Score = 50.1 bits (103), Expect(4) = 2e-047
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +3 / -2
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVP 731
VLGS L WF+AV ++ +++ +K P + AWA+RF K+V+P
Sbjct: 186 VLGSHLGWFKAVEKISGTKLLKEAKYPEITAWADRFCAHHAVKDVMP 46
Score = 49.6 bits (102), Expect(4) = 2e-047
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1 / -2
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+EH+E F KCS G +FGGD IG++D+VL
Sbjct: 270 LEHLEEAFVKCSQGKHYFGGDRIGFLDLVL 181
>gb|CW248191.1|CW248191 104_709_11222168_148_35026_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11222168, DNA
sequence
Length = 618
Score = 139 bits (298), Expect(3) = 3e-047
Identities = 55/74 (74%), Positives = 66/74 (89%)
Frame = +1 / -3
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
LK+LGL SPFV+R LALN+KG+SYEYVEED+ NKS+LLL SNPVHKKVPVLIH+GKP+
Sbjct: 553 LKLLGLWTSPFVIRARLALNLKGLSYEYVEEDVKNKSQLLLASNPVHKKVPVLIHDGKPV 374
Query: 298 CESLVIMQYVDELF 339
CES VI+ Y+DE+F
Sbjct: 373 CESQVIVHYIDEVF 332
Score = 95.9 bits (203), Expect(2) = 1e-024
Identities = 44/78 (56%), Positives = 55/78 (70%)
Frame = -3 / +2
Query: 339 EQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQAH 160
E +DV+HDD * ADGL VVDEHGHLLV+ +G E+EL LV VLLDVLV + V+R+A
Sbjct: 332 EDFIDVVHDDL*FADGLPVVDEHGHLLVNGIGREEELALVLDVLLDVLVAQALEVEREAC 511
Query: 159 AEHERAHLQAEDLKTLLA 106
+HERA A+ L+ A
Sbjct: 512 PDHERAGP*AQQLQLAAA 565
Score = 57.0 bits (118), Expect(3) = 3e-047
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -3
Query: 340 AGRPILPTDPYERATARFWAAYADDKL 420
AG +LP DPYERATARFWAAY DDK+
Sbjct: 316 AGPSLLPADPYERATARFWAAYVDDKV 236
Score = 39.1 bits (79), Expect(2) = 1e-024
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = -1 / +3
Query: 416 LSSA*AAQKRAVARS*GSVGRIGRPA 339
LSS AAQKRAVARS*GS GR PA
Sbjct: 240 LSSTYAAQKRAVARS*GSAGRSEGPA 317
Score = 32.7 bits (65), Expect(3) = 3e-047
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +1 / -2
Query: 427 AWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTFAKCSGGNAFFGGDS 564
AW M+ +E +E F CS G +FGGD+
Sbjct: 143 AWRTMLFAGETDEKMDGAAQAIAALETLESAFQDCSKGKGYFGGDT 6
>gb|CW036911.1|CW036911 104_268_10504039_114_30381 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504039, DNA
sequence
Length = 655
Score = 88.6 bits (187), Expect(4) = 9e-047
Identities = 33/44 (75%), Positives = 40/44 (90%)
Frame = +1 / -3
Query: 208 EDISNKSELLLKSNPVHKKVPVLIHNGKPICESLVIMQYVDELF 339
ED+ NKS+LLL SNPVHKKVPVLIH+GKP+CES VI+ Y+DE+F
Sbjct: 638 EDVKNKSQLLLASNPVHKKVPVLIHDGKPVCESQVIVHYIDEVF 507
Score = 57.0 bits (118), Expect(4) = 9e-047
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -3
Query: 340 AGRPILPTDPYERATARFWAAYADDKL 420
AG +LP DPYERATARFWAAY DDK+
Sbjct: 491 AGPSLLPADPYERATARFWAAYVDDKV 411
Score = 54.7 bits (113), Expect(4) = 9e-047
Identities = 18/36 (50%), Positives = 29/36 (80%)
Frame = +3 / -2
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERF 698
VLG +L WF+ + ++ + +++A++TPLLAAWAERF
Sbjct: 162 VLGGYLGWFDVLEKMIGVRVLDAARTPLLAAWAERF 55
Score = 45.1 bits (92), Expect(4) = 9e-047
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +1 / -2
Query: 427 AWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
AW M+ E +E F CS G +FGGD+ GY+D+VL
Sbjct: 318 AWRTMLFAGETDEKMDGAAQAIAAXETLESAFQDCSKGKGYFGGDTAGYMDVVL 157
>gb|CF071635.1|CF071635 FE1_17_D03.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_17_D03_A002 5', mRNA sequence
Length = 630
Score = 127 bits (271), Expect(4) = 1e-046
Identities = 54/64 (84%), Positives = 58/64 (90%)
Frame = +3 / -3
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVPLPTADMAVQYINK 770
VLGSFLFWFEAVRRV LEII+ASKTPLLAAWAERF G+VEAKEVVP+P AD+AVQYINK
Sbjct: 445 VLGSFLFWFEAVRRVDGLEIIDASKTPLLAAWAERFGGSVEAKEVVPVPEADLAVQYINK 266
Query: 771 LHAP 782
AP
Sbjct: 265 FRAP 254
Score = 126 bits (269), Expect(4) = 6e-039
Identities = 52/63 (82%), Positives = 54/63 (85%)
Frame = -1 / +2
Query: 779 GMKLIDVLYRHVRRGQRHHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQEG 600
G KLIDVLYR VR RHHLLRFY+P KPLRPRSQ+RSLA VNDLQ NPAHRLEPEQEG
Sbjct: 257 GTKLIDVLYRQVRLRHRHHLLRFYTPSKPLRPRSQERSLARVNDLQAVNPAHRLEPEQEG 436
Query: 599 AEH 591
AEH
Sbjct: 437 AEH 445
Score = 114 bits (244), Expect(2) = 1e-025
Identities = 51/62 (82%), Positives = 53/62 (85%)
Frame = -2 / +3
Query: 781 GA*SLLMYCTAMSAVGNGTTSFASTVPTNRSAHAANSGVLLALMISRSKTLRTASNQNKK 602
GA +LLMYCTA SA G GTTSFAST+P NRSAHAA SGVLLA MISR TLRTASNQNKK
Sbjct: 255 GARNLLMYCTAKSASGTGTTSFASTLPPNRSAHAAKSGVLLASMISRPSTLRTASNQNKK 434
Query: 601 EP 596
EP
Sbjct: 435 EP 440
Score = 55.6 bits (115), Expect(4) = 1e-046
Identities = 23/43 (53%), Positives = 23/43 (53%)
Frame = +1 / -3
Query: 409 DDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTFAKCSG 537
DDKLFPAWYGMV IE MEV FAKCSG
Sbjct: 625 DDKLFPAWYGMVKAQAEEERAEKVKETLAAIEKMEVAFAKCSG 497
Score = 48.3 bits (99), Expect(4) = 6e-039
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -1 / +3
Query: 536 PEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSS 408
PEHLAK TS+ FTMPYHAGNNLSS
Sbjct: 498 PEHLAKATSIFSIAASVSFTFSALSSSAWAFTMPYHAGNNLSS 626
Score = 40.5 bits (82), Expect(4) = 1e-046
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1 / -3
Query: 532 SGGNAFFGGDSIGYVDIVL 588
+G AFFGGDSIGYVDIVL
Sbjct: 496 NGNAAFFGGDSIGYVDIVL 440
Score = 26.3 bits (51), Expect(2) = 1e-025
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3 / +2
Query: 444 HHAVPRWKQLVV 409
HHAVPR +QLVV
Sbjct: 590 HHAVPRREQLVV 625
Score = 25.8 bits (50), Expect(4) = 1e-046
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / -2
Query: 935 SRLLCNKYKY 964
SRLLCNKY Y
Sbjct: 65 SRLLCNKYDY 36
Score = 22.1 bits (42), Expect(4) = 6e-039
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3 / +2
Query: 897 NISFEHYSVGI 865
+ F+HYSVGI
Sbjct: 125 SFKFQHYSVGI 157
Score = 22.1 bits (42), Expect(4) = 6e-039
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / +2
Query: 974 SNNHIYIYCRGDD 936
S+ + +IYCR DD
Sbjct: 26 SHQNNHIYCRADD 64
>gb|CW490180.1|CW490180 fsbb001f275h22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f275h22, DNA
sequence
Length = 659
Score = 113 bits (242), Expect(5) = 1e-046
Identities = 42/56 (75%), Positives = 53/56 (94%)
Frame = +1 / +1
Query: 172 LNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPICESLVIMQYVDELF 339
L+ KG+SYEYVEED+ NKS+LLL+SNPVHKKVPVLIHNGKP+CE+ +IMQY+DE++
Sbjct: 1 LSFKGLSYEYVEEDLKNKSQLLLQSNPVHKKVPVLIHNGKPVCETKIIMQYLDEVY 168
Score = 50.6 bits (104), Expect(5) = 1e-046
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKL 420
G +LP DPY+RA ARFWAAY DDK+
Sbjct: 169 GPSLLPADPYDRAMARFWAAYIDDKV 246
Score = 47.3 bits (97), Expect(5) = 1e-046
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1 / +2
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E +CS G FFGGDS+GYVD+VL
Sbjct: 455 VETLERALKECSKGKPFFGGDSVGYVDVVL 544
Score = 31.3 bits (62), Expect(5) = 1e-046
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3 / +2
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTP 671
VLG F+ W + R+ L + ++SKTP
Sbjct: 539 VLGGFVAWVHLIDRLTGLNVFDSSKTP 619
Score = 23.5 bits (45), Expect(5) = 1e-046
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3 / +3
Query: 660 SKTPLLAAWAERF 698
++ PLLAAW E F
Sbjct: 609 ARPPLLAAWLESF 647
>gb|BM330345.1|BM330345 PIC1_50_G02.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 545
Score = 127 bits (271), Expect(3) = 2e-045
Identities = 54/64 (84%), Positives = 58/64 (90%)
Frame = +3 / +3
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVPLPTADMAVQYINK 770
VLGSFLFWFEAVRRV LEII+ASKTPLLAAWAERF G+VEAKEVVP+P AD+AVQYINK
Sbjct: 183 VLGSFLFWFEAVRRVDGLEIIDASKTPLLAAWAERFGGSVEAKEVVPVPEADLAVQYINK 362
Query: 771 LHAP 782
AP
Sbjct: 363 FRAP 374
Score = 126 bits (269), Expect(3) = 1e-037
Identities = 52/63 (82%), Positives = 54/63 (85%)
Frame = -1 / -1
Query: 779 GMKLIDVLYRHVRRGQRHHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQEG 600
G KLIDVLYR VR RHHLLRFY+P KPLRPRSQ+RSLA VNDLQ NPAHRLEPEQEG
Sbjct: 371 GTKLIDVLYRQVRLRHRHHLLRFYTPSKPLRPRSQERSLARVNDLQAVNPAHRLEPEQEG 192
Query: 599 AEH 591
AEH
Sbjct: 191 AEH 183
Score = 114 bits (244), Expect(2) = 9e-026
Identities = 51/62 (82%), Positives = 53/62 (85%)
Frame = -2 / -2
Query: 781 GA*SLLMYCTAMSAVGNGTTSFASTVPTNRSAHAANSGVLLALMISRSKTLRTASNQNKK 602
GA +LLMYCTA SA G GTTSFAST+P NRSAHAA SGVLLA MISR TLRTASNQNKK
Sbjct: 373 GARNLLMYCTAKSASGTGTTSFASTLPPNRSAHAAKSGVLLASMISRPSTLRTASNQNKK 194
Query: 601 EP 596
EP
Sbjct: 193 EP 188
Score = 55.6 bits (115), Expect(3) = 2e-045
Identities = 23/43 (53%), Positives = 23/43 (53%)
Frame = +1 / +3
Query: 409 DDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTFAKCSG 537
DDKLFPAWYGMV IE MEV FAKCSG
Sbjct: 3 DDKLFPAWYGMVKAQAEEERAEKVKETLAAIEKMEVAFAKCSG 131
Score = 48.3 bits (99), Expect(3) = 1e-037
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -1 / -2
Query: 536 PEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSS 408
PEHLAK TS+ FTMPYHAGNNLSS
Sbjct: 130 PEHLAKATSIFSIAASVSFTFSALSSSAWAFTMPYHAGNNLSS 2
Score = 40.5 bits (82), Expect(3) = 2e-045
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1 / +3
Query: 532 SGGNAFFGGDSIGYVDIVL 588
+G AFFGGDSIGYVDIVL
Sbjct: 132 NGNAAFFGGDSIGYVDIVL 188
Score = 26.3 bits (51), Expect(2) = 9e-026
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3 / -1
Query: 444 HHAVPRWKQLVV 409
HHAVPR +QLVV
Sbjct: 38 HHAVPRREQLVV 3
Score = 22.1 bits (42), Expect(3) = 1e-037
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 897 NISFEHYSVGI 865
+ F+HYSVGI
Sbjct: 503 SFKFQHYSVGI 471
>gb|BF421398.1|BF421398 FM1_8_D04.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 508
Score = 136 bits (292), Expect(2) = 2e-045
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = +1 / +2
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
LK+LG+ SP+V RV + LN+KG+SYEYVEED+ NKSELLLKSNPVHKKVPVLIH+GKPI
Sbjct: 14 LKLLGVWDSPYVNRVQIVLNLKGLSYEYVEEDLLNKSELLLKSNPVHKKVPVLIHDGKPI 193
Query: 298 CESLVIMQYVDELFAG 345
ES VI+QY+DE+FAG
Sbjct: 194 AESEVIVQYLDEVFAG 241
Score = 89.0 bits (188), Expect(2) = 9e-023
Identities = 43/79 (54%), Positives = 50/79 (63%)
Frame = -3 / -1
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE L++VL DD L D L VVDEHGHLLVHRVGLE+EL LV V LDVLV + V+
Sbjct: 241 AGEDLIEVLDDDFRLGDRLAVVDEHGHLLVHRVGLEKELALVEEVFLDVLVAEALEVEHD 62
Query: 165 AHAEHERAHLQAEDLKTLL 109
RA A+ L+ L
Sbjct: 61 LDPVDVRAVPDAQQLQLTL 5
Score = 68.0 bits (142), Expect(2) = 2e-045
Identities = 28/76 (36%), Positives = 37/76 (48%)
Frame = +1 / +2
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G +LP DPY RATARFWAA+ DDK+ W+ ++ +E +E F
Sbjct: 245 GPSVLPADPYGRATARFWAAFVDDKVGSPWHTILFAREAEKKADAASRIIAALETLEGAF 424
Query: 523 AKCSGGNAFFGGDSIG 570
CSGG + G G
Sbjct: 425 RDCSGGRYDYFGGDGG 472
Score = 39.6 bits (80), Expect(2) = 9e-023
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = -3 / -1
Query: 435 VPRWKQLVVGVGSPEASSGALVGVGWEDRPA 343
VP LVV G PEA GA VGVG EDR A
Sbjct: 337 VPWRPDLVVDEGGPEAGGGAAVGVGGEDRRA 245
>gb|CW301871.1|CW301871 104_785_11464426_148_36264_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464426, DNA
sequence
Length = 712
Score = 121 bits (258), Expect(4) = 6e-045
Identities = 48/72 (66%), Positives = 64/72 (88%)
Frame = +1 / +2
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
L +LG SP+V+RV +AL +KG+SY+Y+EED++NKS+LLL+SNPVHKKVPVLIH G+P+
Sbjct: 32 LLLLGTWSSPWVIRVRVALGLKGLSYDYLEEDLANKSDLLLRSNPVHKKVPVLIHGGRPV 211
Query: 298 CESLVIMQYVDE 333
ESLVI+QY+DE
Sbjct: 212 RESLVILQYLDE 247
Score = 75.8 bits (159), Expect(3) = 1e-021
Identities = 34/62 (54%), Positives = 42/62 (67%)
Frame = -3 / -1
Query: 336 QLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQAHA 157
+LV+VL D E LA VDE HLLVHRVG EQE+ LVG VLL+V+V + QR H+
Sbjct: 250 RLVEVLQDHERLAHRAAAVDEDRHLLVHRVGPEQEVALVGEVLLEVVVAQALEPQRHPHS 71
Query: 156 EH 151
+H
Sbjct: 70 DH 65
Score = 53.3 bits (110), Expect(4) = 6e-045
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +1 / +2
Query: 349 PILPTDPYERATARFWAAYADDKL 420
P+LP DPY+RATARFWAAY +DK+
Sbjct: 275 PLLPADPYDRATARFWAAYVNDKV 346
Score = 45.1 bits (92), Expect(4) = 6e-045
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1 / +1
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E FA+CS G AFFGGD++ VDI L
Sbjct: 547 VETLERAFAECSRGKAFFGGDAVXIVDIAL 636
Score = 40.9 bits (83), Expect(3) = 1e-021
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3 / -1
Query: 417 LVVGVGSPEASSGALVGVGWEDR 349
LVV VG PE GA+VGVGWE+R
Sbjct: 343 LVVDVGRPEPCRGAVVGVGWEER 275
Score = 29.9 bits (59), Expect(3) = 1e-021
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -1 / -3
Query: 587 STMST*PMESPPKKALPPEHLAKVTS 510
S MST SPPK A P EH A S
Sbjct: 635 SAMSTIXTASPPKNAFPLEHSANARS 558
Score = 24.4 bits (47), Expect(4) = 6e-045
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3 / +1
Query: 594 LGSFLFWFEAVRRVFDLEIINASKTP 671
LGS L W V V ++++ +K P
Sbjct: 634 LGSHLIWIRVVDEVGGTDLLDGAKFP 711
>gb|BE360502.1|BE360502 DG1_64_A05.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 572
Score = 86.8 bits (183), Expect(5) = 7e-045
Identities = 32/42 (76%), Positives = 40/42 (95%)
Frame = +1 / +3
Query: 217 SNKSELLLKSNPVHKKVPVLIHNGKPICESLVIMQYVDELFA 342
++KSELLLKSNPVHKKVPVL HNGKP+CES++I+QY++E FA
Sbjct: 78 NSKSELLLKSNPVHKKVPVLFHNGKPVCESMIIIQYLEEAFA 203
Score = 59.7 bits (124), Expect(5) = 7e-045
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +1 / +3
Query: 340 AGRPILPTDPYERATARFWAAYADDKLFPAW 432
AG +LP+DP+ERA ARFWAAY D+KLF +W
Sbjct: 207 AGPSLLPSDPHERAVARFWAAYIDEKLFSSW 299
Score = 39.6 bits (80), Expect(5) = 7e-045
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1 / +3
Query: 508 MEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E ++CS G FFGG++IGY+D+ L
Sbjct: 375 LEGALSECSKGKPFFGGETIGYLDVAL 455
Score = 38.2 bits (77), Expect(5) = 7e-045
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +1 / +3
Query: 148 FVLRVCLALNMKGVSYEYVEE 210
F LRV LAL+ KG+SYEY+EE
Sbjct: 3 FALRVKLALSFKGLSYEYIEE 65
Score = 32.2 bits (64), Expect(5) = 7e-045
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3 / +3
Query: 654 NASKTPLLAAWAERF 698
+A KTPLLAAW ERF
Sbjct: 516 DAGKTPLLAAWLERF 560
>gb|CW459012.1|CW459012 fsbb001f205i21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f205i21, DNA
sequence
Length = 673
Score = 127 bits (271), Expect(4) = 2e-044
Identities = 54/64 (84%), Positives = 58/64 (90%)
Frame = +3 / -3
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVPLPTADMAVQYINK 770
VLGSFLFWFEAVRRV LEII+ASKTPLLAAWAERF G+VEAKEVVP+P AD+AVQYINK
Sbjct: 491 VLGSFLFWFEAVRRVDGLEIIDASKTPLLAAWAERFGGSVEAKEVVPVPEADLAVQYINK 312
Query: 771 LHAP 782
AP
Sbjct: 311 FRAP 300
Score = 126 bits (269), Expect(4) = 5e-038
Identities = 52/63 (82%), Positives = 54/63 (85%)
Frame = -1 / +3
Query: 779 GMKLIDVLYRHVRRGQRHHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQEG 600
G KLIDVLYR VR RHHLLRFY+P KPLRPRSQ+RSLA VNDLQ NPAHRLEPEQEG
Sbjct: 303 GTKLIDVLYRQVRLRHRHHLLRFYTPSKPLRPRSQERSLARVNDLQAVNPAHRLEPEQEG 482
Query: 599 AEH 591
AEH
Sbjct: 483 AEH 491
Score = 114 bits (244), Expect(2) = 1e-024
Identities = 51/62 (82%), Positives = 53/62 (85%)
Frame = -2 / +1
Query: 781 GA*SLLMYCTAMSAVGNGTTSFASTVPTNRSAHAANSGVLLALMISRSKTLRTASNQNKK 602
GA +LLMYCTA SA G GTTSFAST+P NRSAHAA SGVLLA MISR TLRTASNQNKK
Sbjct: 301 GARNLLMYCTAKSASGTGTTSFASTLPPNRSAHAAKSGVLLASMISRPSTLRTASNQNKK 480
Query: 601 EP 596
EP
Sbjct: 481 EP 486
Score = 48.3 bits (99), Expect(4) = 2e-044
Identities = 20/41 (48%), Positives = 21/41 (51%)
Frame = +1 / -3
Query: 415 KLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTFAKCSG 537
+LFPAWYGMV IE MEV FAKCSG
Sbjct: 665 QLFPAWYGMVKAQAEEERAEKVKETLAAIEKMEVAFAKCSG 543
Score = 42.8 bits (87), Expect(4) = 5e-038
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = -1 / +1
Query: 536 PEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNN 417
PEHLAK TS+ FTMPYHAGNN
Sbjct: 544 PEHLAKATSIFSIAASVSFTFSALSSSAWAFTMPYHAGNN 663
Score = 40.5 bits (82), Expect(4) = 2e-044
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1 / -3
Query: 532 SGGNAFFGGDSIGYVDIVL 588
+G AFFGGDSIGYVDIVL
Sbjct: 542 NGNAAFFGGDSIGYVDIVL 486
Score = 25.8 bits (50), Expect(4) = 2e-044
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / -2
Query: 935 SRLLCNKYKY 964
SRLLCNKY Y
Sbjct: 111 SRLLCNKYDY 82
Score = 24.4 bits (47), Expect(4) = 5e-038
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1 / +3
Query: 983 GKESNNHIYIYCRGDD 936
G+ S+ + +IYCR DD
Sbjct: 63 GEGSHQNNHIYCRADD 110
Score = 22.6 bits (43), Expect(2) = 1e-024
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / +3
Query: 444 HHAVPRWKQL 415
HHAVPR +QL
Sbjct: 636 HHAVPRREQL 665
Score = 22.1 bits (42), Expect(4) = 5e-038
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3 / +3
Query: 897 NISFEHYSVGI 865
+ F+HYSVGI
Sbjct: 171 SFKFQHYSVGI 203
>gb|CN133158.1|CN133158 OX1_10_B06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_10_B06_A002 5', mRNA sequence
Length = 745
Score = 138 bits (297), Expect(3) = 3e-044
Identities = 57/76 (75%), Positives = 65/76 (85%)
Frame = +1 / +3
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
LK+LGL SPFV R LAL +KG+SYEYVEED+ NKSELLL SNPVHK VPVLIHNGKP+
Sbjct: 207 LKLLGLWSSPFVTRAKLALQIKGLSYEYVEEDLGNKSELLLSSNPVHKVVPVLIHNGKPV 386
Query: 298 CESLVIMQYVDELFAG 345
CES VI+QY+D+ FAG
Sbjct: 387 CESSVIVQYIDDAFAG 434
Score = 91.3 bits (193), Expect(2) = 8e-025
Identities = 42/76 (55%), Positives = 51/76 (67%)
Frame = -3 / -3
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE +VD+LHDD LAD L VVD+H H LV RVG EQEL LV +L DVLV + ++RQ
Sbjct: 434 AGESIVDILHDDGRLADRLPVVDQHRHHLVDRVGAEQELALVAEILFDVLVA*ALDLERQ 255
Query: 165 AHAEHERAHLQAEDLK 118
+ ERA Q + LK
Sbjct: 254 LRSGDERARPQPQQLK 207
Score = 50.6 bits (104), Expect(3) = 3e-044
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G IL DPY+RA ARFWAAY +DK+ W
Sbjct: 438 GPSILAADPYQRAVARFWAAYLEDKIVTPW 527
Score = 44.1 bits (90), Expect(2) = 8e-025
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -3 / -3
Query: 441 HAVPRWKQLVVGVGSPEASSGALVGVGWED 352
H PR LV VG PEAS GALVG+G ED
Sbjct: 536 HPPPRRHNLVFEVGGPEASDGALVGIGGED 447
Score = 29.5 bits (58), Expect(3) = 3e-044
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1 / +3
Query: 535 GGNAFFGGDSIGYVDIVL 588
G FF GDS+ YVD++L
Sbjct: 633 GQGPFFAGDSVXYVDVLL 686
>gb|CW395210.1|CW395210 fsbb001f083c11f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f083c11, DNA
sequence
Length = 661
Score = 117 bits (251), Expect(3) = 3e-044
Identities = 45/75 (60%), Positives = 63/75 (84%)
Frame = +1 / +1
Query: 121 KVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPIC 300
K+LG+ SPFV+RV + LN+KG++YEYVEED+ +KS LL+ SNPVHK VPVL+H G+ I
Sbjct: 172 KLLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLGSKSALLVGSNPVHKTVPVLLHGGRAIN 351
Query: 301 ESLVIMQYVDELFAG 345
ES +I+QY+DE+++G
Sbjct: 352 ESQIILQYIDEVYSG 396
Score = 67.0 bits (140), Expect(3) = 3e-044
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMV 444
G +LP+DPYERATARFWAAY DDK+ AW GMV
Sbjct: 400 GPAVLPSDPYERATARFWAAYIDDKVRSAWLGMV 501
Score = 34.1 bits (68), Expect(3) = 3e-044
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1 / +1
Query: 532 SGGNAFFGGDSIGYVDIVL 588
+G FFGGD IG+VD+VL
Sbjct: 598 AGKKPFFGGDGIGFVDVVL 654
>gb|BE360387.1|BE360387 DG1_63_F11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 624
Score = 117 bits (251), Expect(3) = 3e-044
Identities = 45/75 (60%), Positives = 63/75 (84%)
Frame = +1 / +2
Query: 121 KVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPIC 300
K+LG+ SPFV+RV + LN+KG++YEYVEED+ +KS LL+ SNPVHK VPVL+H G+ I
Sbjct: 125 KLLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLGSKSALLVGSNPVHKTVPVLLHGGRAIN 304
Query: 301 ESLVIMQYVDELFAG 345
ES +I+QY+DE+++G
Sbjct: 305 ESQIILQYIDEVYSG 349
Score = 67.0 bits (140), Expect(3) = 3e-044
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +1 / +2
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMV 444
G +LP+DPYERATARFWAAY DDK+ AW GMV
Sbjct: 353 GPAVLPSDPYERATARFWAAYIDDKVRSAWLGMV 454
Score = 34.1 bits (68), Expect(3) = 3e-044
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1 / +2
Query: 532 SGGNAFFGGDSIGYVDIVL 588
+G FFGGD IG+VD+VL
Sbjct: 551 AGKKPFFGGDGIGFVDVVL 607
>gb|CN132861.1|CN132861 OX1_8_E01.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_8_E01_A002 5', mRNA sequence
Length = 623
Score = 117 bits (251), Expect(3) = 3e-044
Identities = 45/75 (60%), Positives = 63/75 (84%)
Frame = +1 / +3
Query: 121 KVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPIC 300
K+LG+ SPFV+RV + LN+KG++YEYVEED+ +KS LL+ SNPVHK VPVL+H G+ I
Sbjct: 135 KLLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLGSKSALLVGSNPVHKTVPVLLHGGRAIN 314
Query: 301 ESLVIMQYVDELFAG 345
ES +I+QY+DE+++G
Sbjct: 315 ESQIILQYIDEVYSG 359
Score = 67.0 bits (140), Expect(3) = 3e-044
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMV 444
G +LP+DPYERATARFWAAY DDK+ AW GMV
Sbjct: 363 GPAVLPSDPYERATARFWAAYIDDKVRSAWLGMV 464
Score = 34.1 bits (68), Expect(3) = 3e-044
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1 / +3
Query: 532 SGGNAFFGGDSIGYVDIVL 588
+G FFGGD IG+VD+VL
Sbjct: 561 AGKKPFFGGDGIGFVDVVL 617
>gb|BE594226.1|BE594226 WS1_103_H02.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 508
Score = 117 bits (251), Expect(3) = 3e-044
Identities = 45/75 (60%), Positives = 63/75 (84%)
Frame = +1 / +3
Query: 121 KVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPIC 300
K+LG+ SPFV+RV + LN+KG++YEYVEED+ +KS LL+ SNPVHK VPVL+H G+ I
Sbjct: 18 KLLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLGSKSALLVGSNPVHKTVPVLLHGGRAIN 197
Query: 301 ESLVIMQYVDELFAG 345
ES +I+QY+DE+++G
Sbjct: 198 ESQIILQYIDEVYSG 242
Score = 67.0 bits (140), Expect(3) = 3e-044
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMV 444
G +LP+DPYERATARFWAAY DDK+ AW GMV
Sbjct: 246 GPAVLPSDPYERATARFWAAYIDDKVRSAWLGMV 347
Score = 34.1 bits (68), Expect(3) = 3e-044
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1 / +3
Query: 532 SGGNAFFGGDSIGYVDIVL 588
+G FFGGD IG+VD+VL
Sbjct: 444 AGKKPFFGGDGIGFVDVVL 500
>gb|CW259602.1|CW259602 104_726_11228516_116_35191_080 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11228516, DNA
sequence
Length = 629
Score = 93.2 bits (197), Expect(4) = 5e-044
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = +1 / +2
Query: 205 EEDISNKSELLLKSNPVHKKVPVLIHNGKPICESLVIMQYVDELFAG 345
EE NK ELL+KSNPVHKKVPVLIHNGKPICES VI+QY+DE++ G
Sbjct: 17 EEIFGNKGELLVKSNPVHKKVPVLIHNGKPICESQVIVQYIDEIYGG 157
Score = 70.7 bits (148), Expect(4) = 9e-027
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = -3 / -2
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLL 205
A L+DVLHDD *LADGL VVDE G+LLVHR+GL+++L LV LL
Sbjct: 157 AAVDLIDVLHDDL*LADGLAVVDEDGYLLVHRIGLDKKLALVSKDLL 17
Score = 50.1 bits (103), Expect(4) = 5e-044
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1 / +2
Query: 340 AGRPILPTDPYERATARFWAAYADDKL 420
A +LP DPY+RA ARFWAAY DDK+
Sbjct: 158 AAPSLLPVDPYDRAVARFWAAYIDDKV 238
Score = 46.9 bits (96), Expect(4) = 5e-044
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +3 / +3
Query: 594 LGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVP 731
LG F+ W + + L+ +A KTPLLAAW ERF E + V+P
Sbjct: 477 LGGFVAWLQTRDILSGLKHFDADKTPLLAAWLERFCALNETQAVMP 614
Score = 46.0 bits (94), Expect(4) = 5e-044
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +1 / +3
Query: 415 KLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+LF ++ M+ E +E +CS G FFGGDS+GYVDI L
Sbjct: 306 QLFSSFMVMIMGKTEEEKAEGRKQLFAAAETLEGALKECSNGRPFFGGDSVGYVDIAL 479
Score = 40.5 bits (82), Expect(4) = 9e-027
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -1 / -1
Query: 731 RHHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQEGAE 594
RH L F + L+PR Q+R L V LQ RL+P E +E
Sbjct: 614 RHDCLGFVQRAESLQPRRQERGLVGVEMLQARQDVPRLQPRDEASE 477
Score = 36.8 bits (74), Expect(4) = 9e-027
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -1 / -3
Query: 416 LSSA*AAQKRAVARS*GSVGR 354
LSS *AAQKRA ARS*GS GR
Sbjct: 234 LSSM*AAQKRATARS*GSTGR 172
Score = 33.1 bits (66), Expect(4) = 9e-027
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -1 / -2
Query: 587 STMST*PMESPPKKALPPEH 528
S MST P SPPKK LP EH
Sbjct: 478 SAMSTYPTLSPPKKGLPLEH 419
>gb|CD463496.1|CD463496 ETH1_44_A03.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_44_A03_A002 5', mRNA sequence
Length = 657
Score = 86.8 bits (183), Expect(4) = 6e-044
Identities = 32/42 (76%), Positives = 40/42 (95%)
Frame = +1 / +3
Query: 217 SNKSELLLKSNPVHKKVPVLIHNGKPICESLVIMQYVDELFA 342
++KSELLLKSNPVHKKVPVL HNGKP+CES++I+QY++E FA
Sbjct: 210 NSKSELLLKSNPVHKKVPVLFHNGKPVCESMIIIQYLEEAFA 335
Score = 59.7 bits (124), Expect(4) = 6e-044
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +1 / +3
Query: 340 AGRPILPTDPYERATARFWAAYADDKLFPAW 432
AG +LP+DP+ERA ARFWAAY D+KLF +W
Sbjct: 339 AGPSLLPSDPHERAVARFWAAYIDEKLFSSW 431
Score = 49.6 bits (102), Expect(4) = 6e-044
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1 / +3
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEE 210
LK+LG SPF LRV LAL+ KG+SYEY+EE
Sbjct: 105 LKLLGTFSSPFALRVKLALSFKGLSYEYIEE 197
Score = 39.6 bits (80), Expect(4) = 6e-044
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1 / +3
Query: 508 MEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E ++CS G FFGG++IGY+D+ L
Sbjct: 507 LEGALSECSKGKPFFGGETIGYLDVAL 587
>gb|CW370296.1|CW370296 fsbb001f045c09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f045c09, DNA
sequence
Length = 611
Score = 78.0 bits (164), Expect(4) = 6e-044
Identities = 30/50 (60%), Positives = 41/50 (82%)
Frame = +1 / -1
Query: 196 EYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPICESLVIMQYVDELFAG 345
E VEED+ +KS LL+ SNPVHK VPVL+H G+ I ES +I+QY+DE+++G
Sbjct: 611 ESVEEDLGSKSALLVGSNPVHKTVPVLLHGGRAINESQIILQYIDEVYSG 462
Score = 67.0 bits (140), Expect(4) = 6e-044
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +1 / -1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMV 444
G +LP+DPYERATARFWAAY DDK+ AW GMV
Sbjct: 458 GPAVLPSDPYERATARFWAAYIDDKVRSAWLGMV 357
Score = 56.5 bits (117), Expect(4) = 6e-044
Identities = 23/47 (48%), Positives = 31/47 (65%)
Frame = +3 / -1
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVP 731
VLG +L WF AV ++ +I+ ++TPLLAAW +RF AK VVP
Sbjct: 209 VLGGYLGWFGAVAKIIGRRVIDPARTPLLAAWEDRFRAADVAKGVVP 69
Score = 34.1 bits (68), Expect(4) = 6e-044
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1 / -1
Query: 532 SGGNAFFGGDSIGYVDIVL 588
+G FFGGD IG+VD+VL
Sbjct: 260 AGKKPFFGGDGIGFVDVVL 204
>gb|BM330354.1|BM330354 PIC1_50_H02.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 542
Score = 125 bits (267), Expect(3) = 1e-043
Identities = 53/64 (82%), Positives = 58/64 (90%)
Frame = +3 / +3
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVPLPTADMAVQYINK 770
VLGSFLFWFEAVRRV LEII+ASK+PLLAAWAERF G+VEAKEVVP+P AD+AVQYINK
Sbjct: 180 VLGSFLFWFEAVRRVDGLEIIDASKSPLLAAWAERFGGSVEAKEVVPVPEADLAVQYINK 359
Query: 771 LHAP 782
AP
Sbjct: 360 FRAP 371
Score = 123 bits (264), Expect(2) = 7e-035
Identities = 51/63 (80%), Positives = 53/63 (84%)
Frame = -1 / -1
Query: 779 GMKLIDVLYRHVRRGQRHHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQEG 600
G KLIDVLYR VR RHHLLRFY+P KPLRPRSQ+R LA VNDLQ NPAHRLEPEQEG
Sbjct: 368 GTKLIDVLYRQVRLRHRHHLLRFYTPSKPLRPRSQERRLARVNDLQAVNPAHRLEPEQEG 189
Query: 599 AEH 591
AEH
Sbjct: 188 AEH 180
Score = 111 bits (237), Expect(2) = 3e-024
Identities = 50/62 (80%), Positives = 52/62 (83%)
Frame = -2 / -2
Query: 781 GA*SLLMYCTAMSAVGNGTTSFASTVPTNRSAHAANSGVLLALMISRSKTLRTASNQNKK 602
GA +LLMYCTA SA G GTTSFAST+P NRSAHAA SG LLA MISR TLRTASNQNKK
Sbjct: 370 GARNLLMYCTAKSASGTGTTSFASTLPPNRSAHAAKSGDLLASMISRPSTLRTASNQNKK 191
Query: 601 EP 596
EP
Sbjct: 190 EP 185
Score = 52.8 bits (109), Expect(3) = 1e-043
Identities = 22/42 (52%), Positives = 22/42 (52%)
Frame = +1 / +3
Query: 412 DKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTFAKCSG 537
DKLFPAWYGMV IE MEV FAKCSG
Sbjct: 3 DKLFPAWYGMVKAQAEEERAEKVKETLAAIEKMEVAFAKCSG 128
Score = 45.5 bits (93), Expect(2) = 7e-035
Identities = 20/42 (47%), Positives = 21/42 (50%)
Frame = -1 / -2
Query: 536 PEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLS 411
PEHLAK TS+ FTMPYHAGNNLS
Sbjct: 127 PEHLAKATSIFSIAASVSFTFSALSSSA*AFTMPYHAGNNLS 2
Score = 39.1 bits (79), Expect(3) = 1e-043
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1 / +3
Query: 532 SGGNAFFGGDSIGYVDIVL 588
+G AFFGGDS+GYVDIVL
Sbjct: 129 NGNAAFFGGDSMGYVDIVL 185
Score = 24.4 bits (47), Expect(2) = 3e-024
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / -1
Query: 444 HHAVPRWKQLV 412
HHAVPR +QLV
Sbjct: 35 HHAVPRREQLV 3
>gb|CN147630.1|CN147630 WOUND1_50_H12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_50_H12_A002 5', mRNA sequence
Length = 510
Score = 136 bits (292), Expect(2) = 2e-043
Identities = 53/78 (67%), Positives = 70/78 (89%)
Frame = +1 / +1
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
L +LGL VSPF LRV +AL++KG+SYEYVE+D+ +KS+LLL SNPVHKKVPVLIHNGKPI
Sbjct: 91 LTLLGLHVSPFALRVRMALDLKGLSYEYVEQDLFHKSDLLLTSNPVHKKVPVLIHNGKPI 270
Query: 298 CESLVIMQYVDELFAGRP 351
CE+LV+++Y++E++ G P
Sbjct: 271 CEALVVLEYLEEVWPGPP 324
Score = 109 bits (232), Expect(2) = 6e-031
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -3 / -1
Query: 342 GEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQA 163
G L +VL DDE LADGL VVDEHG LLVH VG E+E+ LV VLLDVLV + VQR A
Sbjct: 315 GPDLFEVLQDDESLADGLAVVDEHGDLLVHGVGGEEEVALVEQVLLDVLVAQALQVQRHA 136
Query: 162 HAEHERAHLQAEDLKTLL 109
HA+ ERAH+QA+ +T L
Sbjct: 135 HAKRERAHVQAQQRQTTL 82
Score = 61.6 bits (128), Expect(2) = 2e-043
Identities = 23/30 (76%), Positives = 23/30 (76%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G ILP DPY RA ARFWAAY D KLFPAW
Sbjct: 337 GAAILPADPYGRAVARFWAAYIDGKLFPAW 426
Score = 60.6 bits (126), Expect(3) = 2e-022
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = -1 / -2
Query: 350 GRPANSSSTYCMMTSDSQMGLPLWMSTGTFLCTG 249
G P +SS Y T SQMGLPLWMSTGTFLCTG
Sbjct: 323 GGPGQTSSRYSRTTRASQMGLPLWMSTGTFLCTG 222
Score = 46.9 bits (96), Expect(2) = 6e-031
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -1 / -2
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRP 342
HAGN+L S *AAQKRA AR *GS GR+ P
Sbjct: 425 HAGNSLPSM*AAQKRATARP*GSAGRMAAP 336
Score = 46.4 bits (95), Expect(3) = 2e-022
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = -3 / -1
Query: 444 HHAVPRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
H PR +QL V VG PEAS GA VGV ED AG
Sbjct: 438 HDVYPRREQLAVDVGGPEASDGAAVGVSGEDGCAG 334
Score = 37.7 bits (76), Expect(3) = 2e-022
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = -1 / -2
Query: 185 PFMFSAKHTRSTNGLTCRPRTLRPSLPAIVSLSRYIFPLPLYLF 54
PF SA TRS GLTCRP ++R ++++ S L Y F
Sbjct: 158 PFRSSAMRTRSAKGLTCRPSSVRRPSASLLTASAIDGCLLAYAF 27
>gb|BG240513.1|BG240513 OV1_30_H09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 538
Score = 94.1 bits (199), Expect(4) = 2e-043
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = +1 / +3
Query: 205 EEDISNKSELLLKSNPVHKKVPVLIHNGKPICESLVIMQYVDELFAG 345
E+ KSELLLKSNPVH KVPVLIHNGKP+CESL+I+QY+DE FAG
Sbjct: 123 EDIFGGKSELLLKSNPVHNKVPVLIHNGKPVCESLIILQYIDEAFAG 263
Score = 68.9 bits (144), Expect(3) = 2e-022
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = -3 / -3
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTL 223
AG+ LVDVL DD+ DGL VVDEHG+L+VHRVGLE++L L
Sbjct: 263 AGKGLVDVLQDDQRFTDGLPVVDEHGYLVVHRVGLEEQLAL 141
Score = 58.8 bits (122), Expect(4) = 2e-043
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP DPYERA ARFWAAY DDK+ AW
Sbjct: 267 GPTLLPADPYERAVARFWAAYIDDKVLAAW 356
Score = 42.8 bits (87), Expect(4) = 2e-043
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1 / +3
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E C G FFGGDS+G+VD+VL
Sbjct: 423 VETLEGALRDCGKGKPFFGGDSVGFVDVVL 512
Score = 39.6 bits (80), Expect(3) = 2e-022
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -3 / -3
Query: 432 PRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
P + LV+ VG PEAS+GA VGV E+ AG
Sbjct: 356 PSGQHLVIDVGGPEASNGAFVGVSREEGRAG 264
Score = 38.2 bits (77), Expect(4) = 2e-043
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3 / +2
Query: 138 GEPVRAPRVLGAEHERSELRVRRGGHIQQE 227
GEPVR A+H+ ELRV RGGH++++
Sbjct: 53 GEPVRPAGEARAQHQGPELRVCRGGHLRRQ 142
Score = 36.8 bits (74), Expect(3) = 2e-022
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -3 / -3
Query: 213 VLLDVLVTHSFHVQRQAHAEHERAHLQAEDLKTLLARHCFPL 88
VLL +LV + +R+ H + ERA A+ L+ + + HC+ L
Sbjct: 128 VLLYILVAQALDAERELHPQDERARPHAQQLQLVSSGHCWCL 3
>gb|CN140982.1|CN140982 OX1_48_C12.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_48_C12_A002 5', mRNA sequence
Length = 511
Score = 134 bits (288), Expect(2) = 2e-043
Identities = 53/78 (67%), Positives = 69/78 (88%)
Frame = +1 / +3
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
L +LGL VSPF RV +AL++KG+SYEYVE+D+ +KS+LLL SNPVHKKVPVLIHNGKPI
Sbjct: 72 LTLLGLHVSPFAPRVRMALDLKGLSYEYVEQDLFHKSDLLLTSNPVHKKVPVLIHNGKPI 251
Query: 298 CESLVIMQYVDELFAGRP 351
CESLV+++Y++E++ G P
Sbjct: 252 CESLVVLEYLEEVWPGPP 305
Score = 108 bits (231), Expect(2) = 8e-031
Identities = 49/78 (62%), Positives = 56/78 (71%)
Frame = -3 / -3
Query: 342 GEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQA 163
G L +VL DDE LADGL VVDEHG LLVH VG E+E+ LV VLLDVLV + VQR A
Sbjct: 296 GPDLFEVLQDDERLADGLAVVDEHGDLLVHGVGGEEEVALVEQVLLDVLVAQALQVQRHA 117
Query: 162 HAEHERAHLQAEDLKTLL 109
HA ERAH+QA+ +T L
Sbjct: 116 HARRERAHVQAQQRQTTL 63
Score = 64.3 bits (134), Expect(3) = 7e-023
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = -1 / -1
Query: 350 GRPANSSSTYCMMTSDSQMGLPLWMSTGTFLCTG 249
G P +SS Y T DSQMGLPLWMSTGTFLCTG
Sbjct: 304 GGPGQTSSRYSRTTRDSQMGLPLWMSTGTFLCTG 203
Score = 62.9 bits (131), Expect(2) = 2e-043
Identities = 25/62 (40%), Positives = 32/62 (51%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G ILP DPY RA ARFWAAY D KLFPAW ++ + ++E F
Sbjct: 318 GAAILPADPYGRAVARFWAAYIDGKLFPAWVDVMKAATEEERAEKVKETHAAVLNLEKAF 497
Query: 523 AK 528
++
Sbjct: 498 SE 503
Score = 46.9 bits (96), Expect(2) = 8e-031
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -1 / -1
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRP 342
HAGN+L S *AAQKRA AR *GS GR+ P
Sbjct: 406 HAGNSLPSM*AAQKRATARP*GSAGRMAAP 317
Score = 46.4 bits (95), Expect(3) = 7e-023
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = -3 / -3
Query: 444 HHAVPRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
H PR +QL V VG PEAS GA VGV ED AG
Sbjct: 419 HDVYPRREQLAVDVGGPEASDGAAVGVSGEDGCAG 315
Score = 35.9 bits (72), Expect(3) = 7e-023
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -1 / -1
Query: 185 PFMFSAKHTRSTNGLTCRPRTLRPSLPAIVSLSRYIFPLPLYLF 54
PF SA TR GLTCRP ++R ++++ S L Y F
Sbjct: 139 PFRSSAMRTRGAKGLTCRPSSVRRPSASLLTASAIDGCLLAYAF 8
>gb|CW224878.1|CW224878 104_662_11204056_148_37205_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11204056, DNA
sequence
Length = 653
Score = 127 bits (271), Expect(3) = 3e-043
Identities = 54/64 (84%), Positives = 58/64 (90%)
Frame = +3 / -1
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVPLPTADMAVQYINK 770
VLGSFLFWFEAVRRV LEII+ASKTPLLAAWAERF G+VEAKEVVP+P AD+AVQYINK
Sbjct: 362 VLGSFLFWFEAVRRVDGLEIIDASKTPLLAAWAERFGGSVEAKEVVPVPEADLAVQYINK 183
Query: 771 LHAP 782
AP
Sbjct: 182 FRAP 171
Score = 126 bits (269), Expect(3) = 5e-036
Identities = 52/63 (82%), Positives = 54/63 (85%)
Frame = -1 / +3
Query: 779 GMKLIDVLYRHVRRGQRHHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQEG 600
G KLIDVLYR VR RHHLLRFY+P KPLRPRSQ+RSLA VNDLQ NPAHRLEPEQEG
Sbjct: 174 GTKLIDVLYRQVRLRHRHHLLRFYTPSKPLRPRSQERSLARVNDLQAVNPAHRLEPEQEG 353
Query: 599 AEH 591
AEH
Sbjct: 354 AEH 362
Score = 114 bits (244), Expect(2) = 1e-024
Identities = 51/62 (82%), Positives = 53/62 (85%)
Frame = -2 / +1
Query: 781 GA*SLLMYCTAMSAVGNGTTSFASTVPTNRSAHAANSGVLLALMISRSKTLRTASNQNKK 602
GA +LLMYCTA SA G GTTSFAST+P NRSAHAA SGVLLA MISR TLRTASNQNKK
Sbjct: 172 GARNLLMYCTAKSASGTGTTSFASTLPPNRSAHAAKSGVLLASMISRPSTLRTASNQNKK 351
Query: 601 EP 596
EP
Sbjct: 352 EP 357
Score = 48.3 bits (99), Expect(3) = 3e-043
Identities = 20/41 (48%), Positives = 21/41 (51%)
Frame = +1 / -1
Query: 415 KLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTFAKCSG 537
+LFPAWYGMV IE MEV FAKCSG
Sbjct: 536 QLFPAWYGMVKAQAEEERAEKVKETLAAIEKMEVAFAKCSG 414
Score = 42.8 bits (87), Expect(3) = 5e-036
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = -1 / +1
Query: 536 PEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNN 417
PEHLAK TS+ FTMPYHAGNN
Sbjct: 415 PEHLAKATSIFSIAASVSFTFSALSSSAWAFTMPYHAGNN 534
Score = 40.5 bits (82), Expect(3) = 3e-043
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1 / -1
Query: 532 SGGNAFFGGDSIGYVDIVL 588
+G AFFGGDSIGYVDIVL
Sbjct: 413 NGNAAFFGGDSIGYVDIVL 357
Score = 22.6 bits (43), Expect(2) = 1e-024
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / +3
Query: 444 HHAVPRWKQL 415
HHAVPR +QL
Sbjct: 507 HHAVPRREQL 536
Score = 22.1 bits (42), Expect(3) = 5e-036
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3 / +3
Query: 897 NISFEHYSVGI 865
+ F+HYSVGI
Sbjct: 42 SFKFQHYSVGI 74
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,043,686,245
Number of Sequences: 832831
Number of extensions: 14069454
Number of successful extensions: 123745
Number of sequences better than 1.0e-020: 263
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 33270599982
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)