TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3696743.2.1
(977 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DN551899.1|DN551899 pSPR-RT-MR-H1_B06_S170 pSPR Sorghum ... 454 e-146
gb|BE593425.1|BE593425 WS1_97_F09.b1_A002 Water-stressed 1 ... 394 e-108
gb|BG103154.1|BG103154 RHIZ2_18_G08.g1_A003 Rhizome2 (RHIZ2... 322 e-101
gb|CF488045.1|CF488045 POL1_47_A08.g1_A002 Pollen Sorghum b... 352 4e-096
gb|AW564805.1|AW564805 LG1_301_F09.b1_A002 Light Grown 1 (L... 339 5e-092
gb|AW564753.1|AW564753 LG1_301_D09.b1_A002 Light Grown 1 (L... 337 2e-091
gb|BE593115.1|BE593115 WS1_97_F09.g1_A002 Water-stressed 1 ... 264 1e-083
gb|BE359363.1|BE359363 DG1_40_D01.g1_A002 Dark Grown 1 (DG1... 270 8e-081
gb|BE595663.1|BE595663 PI1_55_A07.g1_A002 Pathogen induced ... 254 2e-078
gb|BF587838.1|BF587838 FM1_33_F06.g1_A003 Floral-Induced Me... 261 8e-074
gb|CW410447.1|CW410447 fsbb001f105d07f0 Sorghum methylation... 142 7e-071
gb|CW410448.1|CW410448 fsbb001f105d07k0 Sorghum methylation... 142 2e-069
gb|CF428487.1|CF428487 PH1_15_D10.g1_A002 Phosphorous-defic... 258 1e-067
gb|BG463628.1|BG463628 EM1_50_A05.g1_A002 Embryo 1 (EM1) So... 240 2e-067
gb|CF770746.1|CF770746 DSBF1_9_B10.g1_A010 Drought-stressed... 199 2e-066
gb|BF177091.1|BF177091 EM1_3_E09.g1_A002 Embryo 1 (EM1) Sor... 232 5e-065
gb|CF487966.1|CF487966 POL1_47_A08.b1_A002 Pollen Sorghum b... 228 5e-064
gb|CF488341.1|CF488341 POL1_49_G04.b1_A002 Pollen Sorghum b... 241 2e-062
gb|CW231166.1|CW231166 104_680_11210980_116_37342_010 Sorgh... 142 2e-061
gb|CW030108.1|CW030108 104_258_10500065_114_30403 Sorghum m... 83 1e-058
gb|CL148074.1|CL148074 104_327_10592836_116_31781_344 Sorgh... 83 1e-058
gb|CW157762.1|CW157762 104_561_11147696_148_36393_028 Sorgh... 83 2e-057
gb|CW330844.1|CW330844 104_827_11480592_116_36010_082 Sorgh... 83 4e-054
gb|CW135737.1|CW135737 104_520_11118005_116_34836_023 Sorgh... 190 1e-052
gb|BI211673.1|BI211673 IP1_60_D12.g1_A002 Immature pannicle... 135 6e-048
gb|CW089146.1|CW089146 104_434_10948530_115_32585_073 Sorgh... 83 3e-047
gb|CW182991.1|CW182991 104_598_11164376_116_36666_020 Sorgh... 79 2e-046
gb|CN134509.1|CN134509 OX1_26_F12.g1_A002 Oxidatively-stres... 131 1e-045
gb|CW163008.1|CW163008 104_570_11151237_116_36445_087 Sorgh... 79 3e-045
gb|CW194330.1|CW194330 104_617_11180039_148_36789_088 Sorgh... 136 3e-044
gb|CW482935.1|CW482935 fsbb001f244e18f0 Sorghum methylation... 83 8e-044
gb|CW301269.1|CW301269 104_785_11464112_148_36268_032 Sorgh... 79 4e-043
gb|DN551908.1|DN551908 pSPR-RT-MR-H2_E02_C027 pSPR Sorghum ... 140 2e-042
gb|CF485254.1|CF485254 POL1_30_H08.b1_A002 Pollen Sorghum b... 156 9e-042
gb|BZ346558.1|BZ346558 hv20d11.b1 WGS-SbicolorF (JM107 adap... 96 2e-041
gb|BF656550.1|BF656550 FM1_51_D09.g1_A003 Floral-Induced Me... 153 3e-040
gb|CW356188.1|CW356188 fsbb001f021c08k0 Sorghum methylation... 136 6e-040
gb|CW396612.1|CW396612 fsbb001f085c03k0 Sorghum methylation... 78 1e-039
gb|CW178747.1|CW178747 104_592_11159733_116_36617_085 Sorgh... 84 3e-038
gb|CW190349.1|CW190349 104_612_11174456_116_36836_032 Sorgh... 136 1e-036
gb|CW450000.1|CW450000 fsbb001f188g17k0 Sorghum methylation... 98 2e-036
gb|CW140184.1|CW140184 104_530_11135648_116_34915_022 Sorgh... 98 2e-036
gb|CF482007.1|CF482007 POL1_76_B05.b1_A002 Pollen Sorghum b... 139 7e-036
gb|CW484158.1|CW484158 fsbb001f246c16f0 Sorghum methylation... 133 1e-035
gb|BE595671.1|BE595671 PI1_55_B08.g1_A002 Pathogen induced ... 118 4e-035
gb|CW330845.1|CW330845 104_827_11480592_148_36009_082 Sorgh... 78 5e-034
gb|CL185414.1|CL185414 104_399_10899512_116_32395_024 Sorgh... 100 8e-034
gb|DN551859.1|DN551859 pSPR-RT-MR-H1_C07_C263 pSPR Sorghum ... 144 2e-033
gb|BF176662.1|BF176662 EM1_1_E11.g1_A002 Embryo 1 (EM1) Sor... 143 5e-033
gb|CW411648.1|CW411648 fsbb001f106o17k0 Sorghum methylation... 122 1e-032
gb|CW407009.1|CW407009 fsbb001f100e16k0 Sorghum methylation... 122 1e-032
gb|BG649190.1|BG649190 EM1_77_G11.g1_A002 Embryo 1 (EM1) So... 140 4e-032
gb|CL162485.1|CL162485 104_354_10806435_116_31831_339 Sorgh... 74 7e-032
gb|BG948185.1|BG948185 IP1_10_D07.g1_A002 Immature pannicle... 138 2e-031
gb|BF587888.1|BF587888 FM1_34_C12.g1_A003 Floral-Induced Me... 137 2e-031
gb|BG412421.1|BG412421 OV2_33_H08.g1_A002 Ovary 2 (OV2) Sor... 137 2e-031
gb|CW099173.1|CW099173 104_466_11003407_116_34382_032 Sorgh... 62 2e-031
gb|CN134426.1|CN134426 OX1_26_F12.b1_A002 Oxidatively-stres... 134 2e-030
gb|CW163009.1|CW163009 104_570_11151237_148_36446_087 Sorgh... 76 4e-030
gb|CW205365.1|CW205365 104_633_11187029_116_36925_019 Sorgh... 69 1e-029
gb|BZ347855.1|BZ347855 ho35g11.g1 WGS-SbicolorF (JM107 adap... 84 3e-029
gb|BF421511.1|BF421511 FM1_8_F10.g1_A003 Floral-Induced Mer... 128 1e-028
gb|BG463683.1|BG463683 EM1_50_G01.g1_A002 Embryo 1 (EM1) So... 109 3e-028
gb|CW099174.1|CW099174 104_466_11003407_148_34378_032 Sorgh... 79 4e-028
gb|CW030109.1|CW030109 104_258_10500065_116_30404 Sorghum m... 83 5e-028
gb|BZ366524.1|BZ366524 ic97f02.g1 WGS-SbicolorF (JM107 adap... 75 5e-028
gb|BI245776.1|BI245776 IP1_64_C06.g1_A002 Immature pannicle... 126 5e-028
gb|CF482822.1|CF482822 POL1_9_H11.b1_A002 Pollen Sorghum bi... 107 3e-027
gb|BG605739.1|BG605739 RHIZ2_80_H09.g1_A003 Rhizome2 (RHIZ2... 123 3e-027
gb|CD228133.1|CD228133 CCC1_6_E11.b1_A007 Callus culture/ce... 122 1e-026
gb|BG103497.1|BG103497 RHIZ2_37_C08.g1_A003 Rhizome2 (RHIZ2... 121 2e-026
gb|BF585842.1|BF585842 FM1_25_B08.g1_A003 Floral-Induced Me... 117 2e-025
gb|CW182992.1|CW182992 104_598_11164376_148_36665_020 Sorgh... 76 3e-025
gb|CW231167.1|CW231167 104_680_11210980_148_37338_010 Sorgh... 109 4e-025
gb|CL148075.1|CL148075 104_327_10592836_148_31780_344 Sorgh... 78 1e-024
gb|CW789353.1|CW789353 SP__Ba0057C22.r SP__Ba Sorghum propi... 107 2e-024
gb|CF485232.1|CF485232 POL1_30_F05.b1_A002 Pollen Sorghum b... 111 1e-023
gb|CF428476.1|CF428476 PH1_15_D10.b1_A002 Phosphorous-defic... 78 5e-023
gb|BG557163.1|BG557163 EM1_43_D03.g1_A002 Embryo 1 (EM1) So... 109 6e-023
gb|CW468737.1|CW468737 fsbb001f221b11k0 Sorghum methylation... 73 1e-022
gb|CW178748.1|CW178748 104_592_11159733_148_36618_085 Sorgh... 73 1e-022
gb|CW456784.1|CW456784 fsbb001f202e21f0 Sorghum methylation... 108 1e-022
gb|CW435603.1|CW435603 fsbb001f151n10f0 Sorghum methylation... 60 1e-022
gb|CW041429.1|CW041429 104_274_10506544_116_30484 Sorghum m... 55 1e-021
gb|CW396611.1|CW396611 fsbb001f085c03f0 Sorghum methylation... 75 1e-021
gb|CW482936.1|CW482936 fsbb001f244e18k0 Sorghum methylation... 75 1e-021
gb|CW041428.1|CW041428 104_274_10506544_116_30434 Sorghum m... 55 2e-021
>gb|DN551899.1|DN551899 pSPR-RT-MR-H1_B06_S170 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 884
Score = 454 bits (986), Expect(4) = e-146
Identities = 182/191 (95%), Positives = 187/191 (97%)
Frame = -2 / -2
Query: 934 LLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQ 755
LLISFWR+T QKPKRIIFYRDGVSEGQFYQVLL+ELDAIRKACASLESDYQPPVTFVVVQ
Sbjct: 850 LLISFWRSTKQKPKRIIFYRDGVSEGQFYQVLLHELDAIRKACASLESDYQPPVTFVVVQ 671
Query: 754 KRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYH 575
KRHHTRLF NNHNDQRA D+SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYH
Sbjct: 670 KRHHTRLFANNHNDQRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYH 491
Query: 574 VLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGS 395
VLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDT+DSGS
Sbjct: 490 VLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTTDSGS 311
Query: 394 VASGATTSRGP 362
+ASGATTSR P
Sbjct: 310 MASGATTSRAP 278
Score = 364 bits (789), Expect(3) = e-118
Identities = 149/195 (76%), Positives = 158/195 (81%)
Frame = +1 / +1
Query: 346 CAPLVEGHGLS*HRSPQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW 525
C + G GLS*H SP C YLAPC++ELGRLP EH+MQEERLILS CT HTCNT CW
Sbjct: 262 CCVPLPGLGLS*HHSP*THCQWYLAPCRSELGRLPGEHNMQEERLILSECT*HTCNTGCW 441
Query: 526 *EFATHQP*ICSHPTEHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQ 705
*EFATH *ICSHPT HDNGQ GLFPECQHG GRNQ +LDG+SLSPPQ AVC HFY+Q
Sbjct: 442 *EFATHPR*ICSHPTGHDNGQGGLFPECQHGYRGRNQIQLDGRSLSPPQYQAVCFHFYQQ 621
Query: 706 HADHCDY*QTTWCDDASGPRQK*LEAGNQTPMMHRPF*WHQVRTTELGRTVPH*HHPCRI 885
H HCDY*QTT CDDASGP+Q *LEAGN+TPMMHRPF*WHQV TELGRTVPH*HHPCRI
Sbjct: 622 HVGHCDY*QTT*CDDASGPQQT*LEAGNRTPMMHRPF*WHQVHATELGRTVPH*HHPCRI 801
Query: 886 *SSWVFVQSPSRKK* 930
*S V V SRKK*
Sbjct: 802 *SFLVSV*LTSRKK* 846
Score = 362 bits (784), Expect(2) = e-113
Identities = 152/190 (80%), Positives = 164/190 (86%)
Frame = -1 / -1
Query: 932 SHFFLEGDWTKTQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGPE 753
+HFFLE + T+T++DHILQGWCQ*GTVLPSSV T*CH*KGLCIIGV LPASSY C GPE
Sbjct: 848 THFFLEVN*TETKKDHILQGWCQ*GTVLPSSVA*T*CH*KGLCIIGVRLPASSYVCCGPE 669
Query: 752 ASSHQVVC**SQ*SACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSC 573
ASSH VVC**SQ* CC *KW+HTA +CGGLKDLPSN +*FLP+ PCWHSGNKP CPLSC
Sbjct: 668 ASSH*VVC**SQ*PTCC**KWKHTAWYCGGLKDLPSN*I*FLPL*PCWHSGNKPPCPLSC 489
Query: 572 SVG*EQIYG*WVANSHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGARYK*QRIC 393
VG*EQIY WVANSHQQ VLHVC VH+LSINRSSCILCS GSLPSS+LHGARY *Q +
Sbjct: 488 PVG*EQIYRGWVANSHQQPVLHVC*VHSLSINRSSCILCSPGSLPSSLLHGARYH*QWVY 309
Query: 392 GERCYDKPWP 363
GE CYDKP P
Sbjct: 308 GEWCYDKPSP 279
Score = 361 bits (782), Expect(2) = e-116
Identities = 156/202 (77%), Positives = 171/202 (84%)
Frame = +2 / +2
Query: 362 RATACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQP 541
R +ACRST RHR V+ IWLHV+ SSEGCQ+SI+CRRND*Y*A AP IRVTQVVGESLQP
Sbjct: 278 RGSACRSTTRHRPTVSGIWLHVEASSEGCQVSIICRRND*Y*ASAPSIRVTQVVGESLQP 457
Query: 542 ISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATSIGSTLIIV 721
I KFVLIPQ+MIMGR ACSLNASMA +VEIK WMA+L*VHHS RQYV+T I STL+IV
Sbjct: 458 IRGKFVLIPQDMIMGRAACSLNASMATEVEIKFSWMADL*VHHSTRQYVSTFINSTLVIV 637
Query: 722 IINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVELSLTDTIPVEYDPLGF 901
II+KQP VMTLLDH+K NWRLVI LQ*CTGLSNGIKF+QQNLVELSLTDTIPVEYDP F
Sbjct: 638 IISKQPSVMTLLDHNKRNWRLVIGLQ*CTGLSNGIKFMQQNLVELSLTDTIPVEYDPFWF 817
Query: 902 LSSRPPERNEKVP*SCHQRQSP 967
L S PPERNE P + +SP
Sbjct: 818 LFS*PPERNE*FPDHATRDRSP 883
Score = 357 bits (774), Expect(4) = e-120
Identities = 151/190 (79%), Positives = 160/190 (84%)
Frame = -3 / -3
Query: 939 GTFSFLSGGRLDKNPRGSYSTGMVSVRDSSTKFCCTNLMPLERPVHHWSLITSLQLLLSW 760
G +SFLSGG+L++N +GSYSTGMVSVRDSSTKFCC NLMPLERPVHHWS ITSLQL L W
Sbjct: 855 GNYSFLSGGQLNRNQKGSYSTGMVSVRDSSTKFCCMNLMPLERPVHHWSPITSLQLRLLW 676
Query: 759 SRSVITPGCLLIITMISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPI 580
SRSVIT GCLLIITM +VL I+V TYC LWWTQR AIQ +LIST AMLAFREQA LPI
Sbjct: 675 SRSVITLGCLLIITMTNVLLIKVETYCLVLWWTQRSAIQLNLISTSVAMLAFREQAALPI 496
Query: 579 IMFCGMRTNLRLMGCKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTA 400
IM CGMRTNL MGCKLSPTTCVTRM GA AQYQSFLLH ML WQPSEL TWSQI +T
Sbjct: 495 IMSCGMRTNLPRMGCKLSPTTCVTRMLGALAQYQSFLLHIMLTWQPSELASTWSQIPLTV 316
Query: 399 DLWRAVLRQA 370
LWR VLRQA
Sbjct: 315 GLWRVVLRQA 286
Score = 202 bits (435), Expect(4) = e-100
Identities = 90/108 (83%), Positives = 92/108 (85%)
Frame = +3 / +3
Query: 363 GPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNP 542
G RLVVAPLA DPLS+VSGSM* GGTIDTERVHLAYV*H+LLVRVCNP
Sbjct: 279 GARLVVAPLAIDPLSVVSGSM*KRARKAAR*A*YAGGTIDTERVHLAYV*HRLLVRVCNP 458
Query: 543 SAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
SAVNLFSSHRT**WAGRLVP*MPAWL R*KSNSVGWQIFESTTVPGSM
Sbjct: 459 SAVNLFSSHRT**WAGRLVP*MPAWLQR*KSNSVGWQIFESTTVPGSM 602
Score = 133 bits (286), Expect(4) = e-100
Identities = 58/63 (92%), Positives = 58/63 (92%)
Frame = +3 / +3
Query: 741 V**RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQ 920
V**RFWTTT VTGGW*SDSNDAQAFLMASSS NRTW*NCPSLTPSL*NMIL GFC V LQ
Sbjct: 657 V**RFWTTTNVTGGW*SDSNDAQAFLMASSSCNRTW*NCPSLTPSL*NMILFGFCLVDLQ 836
Query: 921 KEM 929
KEM
Sbjct: 837 KEM 845
Score = 88.1 bits (186), Expect(4) = e-120
Identities = 37/51 (72%), Positives = 40/51 (78%)
Frame = -2 / -2
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC*D*RCADAV 236
+ T+ P GARNTRAG NVAVRPLPALKENVKRVMFYC*D*RC A+
Sbjct: 307 ASGATTSRAPGGARNTRAGVGNVAVRPLPALKENVKRVMFYC*D*RCEKAI 155
Score = 80.8 bits (170), Expect(2) = e-116
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = +3 / +3
Query: 234 LTASAQRQS*Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLV 377
+ A +QRQS*Q*NMTRFTFSLRAGNGLTATF PALVLRAP G +V
Sbjct: 153 IIAFSQRQS*Q*NMTRFTFSLRAGNGLTATFPTPALVLRAPPGARLVV 296
Score = 79.0 bits (166), Expect(3) = e-118
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +1 / +1
Query: 250 SVNLSSRT*RASRFP*GQVMASQQHLQHQPWCCAPL 357
SVNLS+RT* ASRFP*G VMASQQH QHQPWCC PL
Sbjct: 169 SVNLSNRT*HASRFP*GPVMASQQHFQHQPWCCVPL 276
Score = 70.3 bits (147), Expect(4) = e-146
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = -3 / -3
Query: 357 QGRATPGLVLQMLL*GHYLPSRKT*SASCSTAKIDA 250
+G ATPGLVL+MLL*GHY PSRKT*S SCS AKIDA
Sbjct: 276 EGHATPGLVLEMLL*GHYRPSRKT*SVSCSIAKIDA 169
Score = 69.8 bits (146), Expect(2) = e-113
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = -1 / -1
Query: 356 RGAQHQGWCCKCCCEAITCPQGKREARHV 270
RG QHQGWC KCCCEAIT PQGKREA HV
Sbjct: 275 RGTQHQGWCWKCCCEAITGPQGKREACHV 189
Score = 66.6 bits (139), Expect(4) = e-100
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +2 / +2
Query: 266 VEHDALHVFLEGR*WPHSNICSTSPGVARP 355
+EHD LHVFLEGR*WPHSNI +TSPGVA P
Sbjct: 185 IEHDTLHVFLEGR*WPHSNISNTSPGVACP 274
Score = 30.4 bits (60), Expect(4) = e-146
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3 / -1
Query: 969 KGDCLWWHD*GTFSF 925
KG CLWWH GT F
Sbjct: 884 KGICLWWHGQGTTHF 840
Score = 25.8 bits (50), Expect(4) = e-120
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 968 RGTVSGGMIRE 936
RG+VSGGM+RE
Sbjct: 883 RGSVSGGMVRE 851
Score = 24.9 bits (48), Expect(3) = e-118
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / +1
Query: 935 VP*SCHQRQSP 967
VP* CHQRQ P
Sbjct: 850 VP*PCHQRQIP 882
Score = 24.4 bits (47), Expect(4) = e-100
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 936 FPNHATRDSPP 968
FP+HATRD P
Sbjct: 851 FPDHATRDRSP 883
Score = 24.0 bits (46), Expect(4) = e-146
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1 / -3
Query: 218 MVVMLGHRYAPVTLI 174
++VML H YAP+ LI
Sbjct: 108 VLVMLAHCYAPLKLI 64
Score = 23.1 bits (44), Expect(4) = e-120
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2 / -1
Query: 223 SLWW*C*DTVMH 188
+L+W*C TVMH
Sbjct: 113 ALFW*CWHTVMH 78
>gb|BE593425.1|BE593425 WS1_97_F09.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 515
Score = 394 bits (855), Expect = e-108
Identities = 157/163 (96%), Positives = 160/163 (98%)
Frame = -2 / +3
Query: 934 LLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQ 755
LLISFWR+T QKPKRIIFYRDGVSEGQFYQVLL+ELDAIRKACASLESDYQPPVTFVVVQ
Sbjct: 27 LLISFWRSTKQKPKRIIFYRDGVSEGQFYQVLLHELDAIRKACASLESDYQPPVTFVVVQ 206
Query: 754 KRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYH 575
KRHHTRLF NNHNDQRA D+SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYH
Sbjct: 207 KRHHTRLFANNHNDQRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYH 386
Query: 574 VLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLA 446
VLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLA
Sbjct: 387 VLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLA 515
Score = 320 bits (693), Expect = 2e-086
Identities = 130/162 (80%), Positives = 136/162 (83%)
Frame = +1 / -3
Query: 448 PDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPTEHDNGQDGLFPECQHGCTG 627
P EH+MQEERLILS CT HTCNT CW*EFATH *ICSHPT HDNGQ GLFPECQHG G
Sbjct: 513 PGEHNMQEERLILSECT*HTCNTGCW*EFATHPR*ICSHPTGHDNGQGGLFPECQHGYRG 334
Query: 628 RNQTRLDGKSLSPPQCPAVCCHFYRQHADHCDY*QTTWCDDASGPRQK*LEAGNQTPMMH 807
RNQ +LDG+SLSPPQ AVC HFY+QH HCDY*QTT CDDASGP+Q *LEAGN+TPMMH
Sbjct: 333 RNQIQLDGRSLSPPQYQAVCFHFYQQHVGHCDY*QTT*CDDASGPQQT*LEAGNRTPMMH 154
Query: 808 RPF*WHQVRTTELGRTVPH*HHPCRI*SSWVFVQSPSRKK*E 933
RPF*WHQV TELGRTVPH*HHPCRI*S V V SRKK*E
Sbjct: 153 RPF*WHQVHATELGRTVPH*HHPCRI*SFLVSV*LTSRKK*E 28
Score = 316 bits (685), Expect = 3e-085
Identities = 136/165 (82%), Positives = 146/165 (88%)
Frame = +2 / -1
Query: 446 CQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPISRKFVLIPQNMIMGRTACSLNASMAAQ 625
CQ+SI+CRRND*Y*A AP IRVTQVVGESLQPI KFVLIPQ+MIMGR ACSLNASMA +
Sbjct: 515 CQVSIICRRND*Y*ASAPSIRVTQVVGESLQPIRGKFVLIPQDMIMGRAACSLNASMATE 336
Query: 626 VEIKLGWMANL*VHHSARQYVATSIGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*C 805
VEIK WMA+L*VHHS RQYV+T I STL+IVII+KQP VMTLLDH+K NWRLVI LQ*C
Sbjct: 335 VEIKFSWMADL*VHHSTRQYVSTFINSTLVIVIISKQPSVMTLLDHNKRNWRLVIGLQ*C 156
Query: 806 TGLSNGIKFVQQNLVELSLTDTIPVEYDPLGFLSSRPPERNEKVP 940
TGLSNGIKF+QQNLVELSLTDTIPVEYDP FL S PPERNEK P
Sbjct: 155 TGLSNGIKFMQQNLVELSLTDTIPVEYDPFWFLFS*PPERNEKFP 21
Score = 314 bits (680), Expect = 1e-084
Identities = 132/162 (81%), Positives = 141/162 (87%)
Frame = -1 / +2
Query: 932 SHFFLEGDWTKTQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGPE 753
SHFFLE + T+T++DHILQGWCQ*GTVLPSSV T*CH*KGLCIIGV LPASSY C GPE
Sbjct: 29 SHFFLEVN*TETKKDHILQGWCQ*GTVLPSSVA*T*CH*KGLCIIGVRLPASSYVCCGPE 208
Query: 752 ASSHQVVC**SQ*SACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSC 573
ASSH VVC**SQ* CC *KW+HTA +CGGLKDLPSN +*FLP+ PCWHSGNKP CPLSC
Sbjct: 209 ASSH*VVC**SQ*PTCC**KWKHTAWYCGGLKDLPSN*I*FLPL*PCWHSGNKPPCPLSC 388
Query: 572 SVG*EQIYG*WVANSHQQLVLHVCQVHTLSINRSSCILCSSG 447
VG*EQIY WVANSHQQ VLHVC VH+LSINRSSCILCS G
Sbjct: 389 PVG*EQIYRGWVANSHQQPVLHVC*VHSLSINRSSCILCSPG 514
Score = 314 bits (679), Expect = 2e-084
Identities = 133/164 (81%), Positives = 140/164 (85%)
Frame = -3 / +1
Query: 939 GTFSFLSGGRLDKNPRGSYSTGMVSVRDSSTKFCCTNLMPLERPVHHWSLITSLQLLLSW 760
G FSFLSGG+L++N +GSYSTGMVSVRDSSTKFCC NLMPLERPVHHWS ITSLQL L W
Sbjct: 22 GNFSFLSGGQLNRNQKGSYSTGMVSVRDSSTKFCCMNLMPLERPVHHWSPITSLQLRLLW 201
Query: 759 SRSVITPGCLLIITMISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPI 580
SRSVIT GCLLIITM +VL I+V TYC LWWTQR AIQ +LIST AMLAFREQA LPI
Sbjct: 202 SRSVITLGCLLIITMTNVLLIKVETYCLVLWWTQRSAIQLNLISTSVAMLAFREQAALPI 381
Query: 579 IMFCGMRTNLRLMGCKLSPTTCVTRMPGAHAQYQSFLLHTMLIW 448
IM CGMRTNL MGCKLSPTTCVTRM GA AQYQSFLLH ML W
Sbjct: 382 IMSCGMRTNLPRMGCKLSPTTCVTRMLGALAQYQSFLLHIMLTW 513
Score = 168 bits (362), Expect(2) = 2e-075
Identities = 71/73 (97%), Positives = 72/73 (98%)
Frame = +3 / -2
Query: 468 GGTIDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVG 647
GGTIDTERVHLAYV*H+LLVRVCNPSAVNLFSSHRT**WAGRLVP*MPAWL R*KSNSVG
Sbjct: 493 GGTIDTERVHLAYV*HRLLVRVCNPSAVNLFSSHRT**WAGRLVP*MPAWLQR*KSNSVG 314
Query: 648 WQIFESTTVPGSM 686
WQIFESTTVPGSM
Sbjct: 313 WQIFESTTVPGSM 275
Score = 136 bits (291), Expect(2) = 2e-075
Identities = 59/64 (92%), Positives = 59/64 (92%)
Frame = +3 / -2
Query: 741 V**RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQ 920
V**RFWTTT VTGGW*SDSNDAQAFLMASSS NRTW*NCPSLTPSL*NMIL GFC V LQ
Sbjct: 220 V**RFWTTTNVTGGW*SDSNDAQAFLMASSSCNRTW*NCPSLTPSL*NMILFGFCLVDLQ 41
Query: 921 KEMR 932
KEMR
Sbjct: 40 KEMR 29
>gb|BG103154.1|BG103154 RHIZ2_18_G08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 567
Score = 322 bits (697), Expect(2) = e-101
Identities = 126/132 (95%), Positives = 129/132 (97%)
Frame = -2 / +1
Query: 757 QKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHY 578
QKRHHTRLF NNHNDQRA D+SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHY
Sbjct: 1 QKRHHTRLFANNHNDQRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHY 180
Query: 577 HVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSG 398
HVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDT+DSG
Sbjct: 181 HVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTTDSG 360
Query: 397 SVASGATTSRGP 362
S+ASGATTSR P
Sbjct: 361 SMASGATTSRAP 396
Score = 257 bits (556), Expect(2) = 6e-085
Identities = 102/137 (74%), Positives = 109/137 (79%)
Frame = +1 / -3
Query: 346 CAPLVEGHGLS*HRSPQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW 525
C + G GLS*H SP C YLAPC++ELGRLP EH+MQEERLILS CT HTCNT CW
Sbjct: 412 CCVPLPGLGLS*HHSP*THCQWYLAPCRSELGRLPGEHNMQEERLILSECT*HTCNTGCW 233
Query: 526 *EFATHQP*ICSHPTEHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQ 705
*EFATH *ICSHPT HDNGQ GLFPECQHG GRNQ +LDG+SLSPPQ AVC HFY+Q
Sbjct: 232 *EFATHPR*ICSHPTGHDNGQGGLFPECQHGYRGRNQIQLDGRSLSPPQYQAVCFHFYQQ 53
Query: 706 HADHCDY*QTTWCDDAS 756
H HCDY*QTT CDDAS
Sbjct: 52 HVGHCDY*QTT*CDDAS 2
Score = 252 bits (544), Expect(2) = 5e-086
Identities = 105/131 (80%), Positives = 112/131 (85%)
Frame = -1 / +3
Query: 755 EASSHQVVC**SQ*SACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLS 576
EASSH VVC**SQ* CC *KW+HTA +CGGLKDLPSN +*FLP+ PCWHSGNKP CPLS
Sbjct: 3 EASSH*VVC**SQ*PTCC**KWKHTAWYCGGLKDLPSN*I*FLPL*PCWHSGNKPPCPLS 182
Query: 575 CSVG*EQIYG*WVANSHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGARYK*QRI 396
C VG*EQIY WVANSHQQ VLHVC VH+LSINRSSCILCS GSLPSS+LHGARY *Q +
Sbjct: 183 CPVG*EQIYRGWVANSHQQPVLHVC*VHSLSINRSSCILCSPGSLPSSLLHGARYH*QWV 362
Query: 395 CGERCYDKPWP 363
GE CYDKP P
Sbjct: 363 YGEWCYDKPSP 395
Score = 241 bits (521), Expect(2) = 1e-080
Identities = 103/132 (78%), Positives = 114/132 (86%)
Frame = +2 / -1
Query: 362 RATACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQP 541
R +ACRST RHR V+ IWLHV+ SSEGCQ+SI+CRRND*Y*A AP IRVTQVVGESLQP
Sbjct: 396 RGSACRSTTRHRPTVSGIWLHVEASSEGCQVSIICRRND*Y*ASAPSIRVTQVVGESLQP 217
Query: 542 ISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATSIGSTLIIV 721
I KFVLIPQ+MIMGR ACSLNASMA +VEIK WMA+L*VHHS RQYV+T I STL+IV
Sbjct: 216 IRGKFVLIPQDMIMGRAACSLNASMATEVEIKFSWMADL*VHHSTRQYVSTFINSTLVIV 37
Query: 722 IINKQPGVMTLL 757
II+KQP VMTLL
Sbjct: 36 IISKQPSVMTLL 1
Score = 233 bits (503), Expect(2) = 7e-075
Identities = 101/129 (78%), Positives = 105/129 (81%)
Frame = -3 / +2
Query: 756 RSVITPGCLLIITMISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPII 577
RSVIT GCLLIITM +VL I+V TYC LWWTQR AIQ +LIST AMLAFREQA LPII
Sbjct: 2 RSVITLGCLLIITMTNVLLIKVETYCLVLWWTQRSAIQLNLISTSVAMLAFREQAALPII 181
Query: 576 MFCGMRTNLRLMGCKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTAD 397
M CGMRTNL MGCKLSPTTCVTRM GA AQYQSFLLH ML WQPSEL TWSQI +T
Sbjct: 182 MSCGMRTNLPRMGCKLSPTTCVTRMLGALAQYQSFLLHIMLTWQPSELASTWSQIPLTVG 361
Query: 396 LWRAVLRQA 370
LWR VLRQA
Sbjct: 362 LWRVVLRQA 388
Score = 202 bits (435), Expect(2) = 1e-064
Identities = 90/108 (83%), Positives = 92/108 (85%)
Frame = +3 / -2
Query: 363 GPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNP 542
G RLVVAPLA DPLS+VSGSM* GGTIDTERVHLAYV*H+LLVRVCNP
Sbjct: 395 GARLVVAPLAIDPLSVVSGSM*KRARKAAR*A*YAGGTIDTERVHLAYV*HRLLVRVCNP 216
Query: 543 SAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
SAVNLFSSHRT**WAGRLVP*MPAWL R*KSNSVGWQIFESTTVPGSM
Sbjct: 215 SAVNLFSSHRT**WAGRLVP*MPAWLQR*KSNSVGWQIFESTTVPGSM 72
Score = 88.1 bits (186), Expect(2) = 5e-086
Identities = 37/51 (72%), Positives = 40/51 (78%)
Frame = -2 / +1
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC*D*RCADAV 236
+ T+ P GARNTRAG NVAVRPLPALKENVKRVMFYC*D*RC A+
Sbjct: 367 ASGATTSRAPGGARNTRAGVGNVAVRPLPALKENVKRVMFYC*D*RCEKAI 519
Score = 80.8 bits (170), Expect(2) = 1e-080
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = +3 / -2
Query: 234 LTASAQRQS*Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLV 377
+ A +QRQS*Q*NMTRFTFSLRAGNGLTATF PALVLRAP G +V
Sbjct: 521 IIAFSQRQS*Q*NMTRFTFSLRAGNGLTATFPTPALVLRAPPGARLVV 378
Score = 79.0 bits (166), Expect(2) = 6e-085
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +1 / -3
Query: 250 SVNLSSRT*RASRFP*GQVMASQQHLQHQPWCCAPL 357
SVNLS+RT* ASRFP*G VMASQQH QHQPWCC PL
Sbjct: 505 SVNLSNRT*HASRFP*GPVMASQQHFQHQPWCCVPL 398
Score = 70.3 bits (147), Expect(2) = e-101
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = -3 / +2
Query: 357 QGRATPGLVLQMLL*GHYLPSRKT*SASCSTAKIDA 250
+G ATPGLVL+MLL*GHY PSRKT*S SCS AKIDA
Sbjct: 398 EGHATPGLVLEMLL*GHYRPSRKT*SVSCSIAKIDA 505
Score = 69.8 bits (146), Expect(2) = 7e-075
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = -1 / +3
Query: 356 RGAQHQGWCCKCCCEAITCPQGKREARHV 270
RG QHQGWC KCCCEAIT PQGKREA HV
Sbjct: 399 RGTQHQGWCWKCCCEAITGPQGKREACHV 485
Score = 66.6 bits (139), Expect(2) = 1e-064
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +2 / -1
Query: 266 VEHDALHVFLEGR*WPHSNICSTSPGVARP 355
+EHD LHVFLEGR*WPHSNI +TSPGVA P
Sbjct: 489 IEHDTLHVFLEGR*WPHSNISNTSPGVACP 400
>gb|CF488045.1|CF488045 POL1_47_A08.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_47_A08_A002 5', mRNA sequence
Length = 763
Score = 352 bits (764), Expect = 4e-096
Identities = 140/184 (76%), Positives = 160/184 (86%)
Frame = -2 / +3
Query: 934 LLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQ 755
LL SF++ TG+KPKRIIFYRDGVSEGQF VLL+E+DAIRKACAS+E Y PPVTFVVVQ
Sbjct: 210 LLTSFFKRTGRKPKRIIFYRDGVSEGQFSHVLLHEMDAIRKACASMEDGYLPPVTFVVVQ 389
Query: 754 KRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYH 575
KRHHTRLF H + D+SGNILPGTVVD+ ICHP+EFDFYLCSHAGI+GTSRP HYH
Sbjct: 390 KRHHTRLFPEVHGRRDLTDKSGNILPGTVVDTSICHPSEFDFYLCSHAGIKGTSRPTHYH 569
Query: 574 VLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGS 395
VL+DEN+F+AD LQ LTNNLCYTYARCTR+VS+VPPAYYAHLAAFRAR+Y E +++D S
Sbjct: 570 VLYDENRFSADALQFLTNNLCYTYARCTRAVSVVPPAYYAHLAAFRARYYDEQESTDGTS 749
Query: 394 VASG 383
V SG
Sbjct: 750 VVSG 761
Score = 139 bits (298), Expect = 7e-032
Identities = 70/172 (40%), Positives = 107/172 (62%)
Frame = +2 / -3
Query: 425 VKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPISRKFVLIPQNMIMGRTACSL 604
+ P +E CQ+S+V N+ ACA + V +VV E LQ ISR+ VLI ++MI+ ACSL
Sbjct: 719 IVPCAECCQVSVVGWWNNRNSACAACVCVAKVVCEKLQSISRETVLIIEDMIVCWPACSL 540
Query: 605 NASMAAQVEIKLGWMANL*VHHSARQYVATSIGSTLIIVIINKQPGVMTLLDHDKSNWRL 784
N+SMA +VEIKL M N ++HS+R+ V+ + + ++P V+ L H + +W
Sbjct: 539 NSSMATEVEIKLAGMTNASINHSSRKNVSAFVSKISPSMNFREEPCVVPFLYHHECHWW* 360
Query: 785 VIRLQ*CTGLSNGIKFVQQNLVELSLTDTIPVEYDPLGFLSSRPPERNEKVP 940
+ TGL + + F++QN+ ELSLT TIPV+Y+P G SS E ++++P
Sbjct: 359 ITIFHRGTGLPDCVHFMEQNVAELSLTYTIPVKYNPFGLSSSPLKE*SQQLP 204
Score = 115 bits (246), Expect = 1e-024
Identities = 66/160 (41%), Positives = 76/160 (47%)
Frame = -3 / +1
Query: 909 LDKNPRGSYSTGMVSVRDSSTKFCCTNLMPLERPVHHWSLITSLQLLLSWSRSVITPGCL 730
LD++P+G Y TGMV VRD+S FC RPV W ++ Q W R T G
Sbjct: 235 LDESPKGLYFTGMV*VRDNSATFCSMKWTQSGRPVPLWKMVIYHQ*HSWWYRKGTTQGSS 414
Query: 729 LIITMISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTNL 550
L +L + T+ LW F I SLIST AML REQA IM MRT
Sbjct: 415 LKFMEGEILLTKAETFFLELWLILAFVIPASLISTSVAMLELREQAGQHTIMSSMMRTVS 594
Query: 549 RLMGCKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELG 430
RLM C S TT T AHA + F T L WQ S G
Sbjct: 595 RLMLCSFSQTTFATHTHAAHALFLLFHQPTTLTWQHSAQG 714
Score = 93.6 bits (198), Expect(2) = 3e-039
Identities = 46/73 (63%), Positives = 51/73 (69%)
Frame = +3 / -1
Query: 468 GGTIDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVG 647
GGT +T RV AYV* +L VR C SA FSS RT** G LVP +PAWL R*KSNS+G
Sbjct: 676 GGTTETARVQRAYV*QRLFVRNCRASAEKRFSS*RT**CVGLLVPLIPAWLQR*KSNSLG 497
Query: 648 WQIFESTTVPGSM 686
Q+ STTVPG M
Sbjct: 496 *QMLVSTTVPGRM 458
Score = 90.4 bits (191), Expect(2) = 3e-039
Identities = 40/59 (67%), Positives = 48/59 (81%)
Frame = +3 / -1
Query: 753 FWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQKEM 929
F TTT VTGG * S +AQAFL+AS S+++TW NCPSLTPSL*N+ILLGF PV L+ E+
Sbjct: 391 FCTTTNVTGGR*PSSIEAQAFLIASISWSKTWLNCPSLTPSL*NIILLGFRPVLLKNEV 215
Score = 82.6 bits (174), Expect(2) = 2e-023
Identities = 41/90 (45%), Positives = 56/90 (62%)
Frame = -1 / +2
Query: 695 KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQL 516
K +H++ +CG L S RV*FLP+ PCW+ GNK + LSC + *E G* A SH+Q
Sbjct: 449 KRKHSSWNCG*Y*HLSSQRV*FLPL*PCWN*GNKQANTLSCPL**EPFLG*CSAVSHKQP 628
Query: 515 VLHVCQVHTLSINRSSCILCSSGSLPSSVL 426
+LH+ +HT S+ +L S GS+P VL
Sbjct: 629 LLHIRTLHTRCFCCSTSLLRSPGSIPRKVL 718
Score = 71.6 bits (150), Expect(2) = 1e-022
Identities = 38/86 (44%), Positives = 42/86 (48%)
Frame = +1 / -2
Query: 439 GRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPTEHDNGQDGLFPECQHG 618
G LP E S E+ VC+ C+ C *E A HQP SH HD+ LFP QHG
Sbjct: 705 GMLPGERSRLVEQQKQRVCSVRMCSKGCL*ETAEHQPRNGSHHRGHDSVLACLFP*FQHG 526
Query: 619 CTGRNQTRLDGKSLSPPQCPAVCCHF 696
GRNQTR D K PQ C F
Sbjct: 525 YRGRNQTRWDDKC*YQPQFQEECFRF 448
Score = 56.5 bits (117), Expect(2) = 1e-022
Identities = 28/62 (45%), Positives = 31/62 (50%)
Frame = +1 / -2
Query: 742 CDDASGPRQK*LEAGNQTPMMHRPF*WHQVRTTELGRTVPH*HHPCRI*SSWVFVQSPSR 921
C S P + L N P HRP * + G VPH HHPC+I*S W FVQS R
Sbjct: 402 CGAFSVPPRMSLVVDNHLP*RHRPS*LRPFHGAKRG*IVPHLHHPCKI*SFWAFVQSS*R 223
Query: 922 KK 927
K
Sbjct: 222 MK 217
Score = 51.0 bits (105), Expect(2) = 2e-023
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -1 / +2
Query: 926 FFLEGDWTKTQEDHILQGWCQ*GTVLP 846
F L DWTK Q+D+ILQGWC+*GT+ P
Sbjct: 218 FIL*EDWTKAQKDYILQGWCK*GTIQP 298
>gb|AW564805.1|AW564805 LG1_301_F09.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 435
Score = 339 bits (734), Expect = 5e-092
Identities = 134/141 (95%), Positives = 136/141 (96%)
Frame = -2 / +1
Query: 811 ACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFD 632
ACASLE +YQPPVTFVVVQKRHHTRLF NNHNDQR DRSGNILPGTVVDSKICHPTEFD
Sbjct: 13 ACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTEFD 192
Query: 631 FYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAH 452
FYLCSHAGIQGTSRPAHYHVLWDENKFTAD LQTLTNNLCYTYARCTRSVSIVPPAYYAH
Sbjct: 193 FYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAH 372
Query: 451 LAAFRARFYMEPDTSDSGSVA 389
LAAFRARFYMEPDTSDSGS+A
Sbjct: 373 LAAFRARFYMEPDTSDSGSMA 435
Score = 222 bits (479), Expect = 7e-057
Identities = 98/143 (68%), Positives = 114/143 (79%)
Frame = +2 / -1
Query: 392 HRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPISRKFVLIPQ 571
H V IWLHV+ SSEGCQMSIVCR ++*+ A AP +RV QVV +SLQ IS K VLIPQ
Sbjct: 432 H*PTVRGIWLHVEASSEGCQMSIVCRGHN*HGASAPSVRVAQVVCQSLQLISCKLVLIPQ 253
Query: 572 NMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATSIGSTLIIVIINKQPGVMT 751
+M+M R ACSLNA MA QVEIK MANL ++H ARQYV+TSI TL+IV+I+KQP VM+
Sbjct: 252 DMVMSRAACSLNAGMATQVEIKFRRMANLGINHGARQYVSTSINCTLVIVVISKQPSVMS 73
Query: 752 LLDHDKSNWRLVIRLQ*CTGLSN 820
LLDHDKSNWRLVI LQ CTGLS+
Sbjct: 72 LLDHDKSNWRLVIGLQGCTGLSS 4
Score = 221 bits (476), Expect = 2e-056
Identities = 91/141 (64%), Positives = 100/141 (70%)
Frame = +1 / -3
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPT 570
P C YLAPC++ELGRLPDEHSM +L S CT TC+T C E A HQ * CSHPT
Sbjct: 433 PLTHCQRYLAPCRSELGRLPDEHSMPGAQLTRSECT*RTCSTGCLSESAAHQL*TCSHPT 254
Query: 571 EHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHADHCDY*QTTWCDD 750
H N Q GLFPEC+HG TGRNQ DGKS + P+C AVC HFY+ +A HC Y*QT CD
Sbjct: 253 GHGNEQGGLFPECRHGYTGRNQIP*DGKSWNQPRCQAVCFHFYQLYAGHCGY*QTA*CDV 74
Query: 751 ASGPRQK*LEAGNQTPMMHRP 813
ASGPRQK*LEAGN P MHRP
Sbjct: 73 ASGPRQK*LEAGNWAPGMHRP 11
Score = 208 bits (448), Expect = 1e-052
Identities = 95/142 (66%), Positives = 101/142 (71%)
Frame = -3 / +2
Query: 816 ERPVHHWSLITSLQLLLSWSRSVITPGCLLIITMISVLPIEVATYCRALWWTQRFAIQPS 637
+RPVH WS ITSLQLLLSWSRS IT GCLLI TM SV IEV TYC A W RFAI +
Sbjct: 8 DRPVHPWSPITSLQLLLSWSRSDITLGCLLITTMTSVQLIEVETYCLAPWLIPRFAILRN 187
Query: 636 LISTCAAMLAFREQAVLPIIMFCGMRTNLRLMGCKLSPTTCVTRMPGAHAQYQSFLLHTM 457
LISTC AM AFREQA L I M CGMRT+L+LM C+L TTC TR GA A Q HTM
Sbjct: 188 LISTCVAMPAFREQAALLITMSCGMRTSLQLMSCRL*QTTCATRTLGALAPCQLCPRHTM 367
Query: 456 LIWQPSELGFTWSQIQVTADLW 391
LIWQPSEL TWSQI +T W
Sbjct: 368 LIWQPSELASTWSQIPLTVGQW 433
Score = 200 bits (432), Expect = 2e-050
Identities = 93/141 (65%), Positives = 105/141 (74%)
Frame = -1 / +3
Query: 812 GLCIIGV*LPASSYFCRGPEASSHQVVC**SQ*SACCR*KWQHTAGHCGGLKDLPSNRV* 633
GLCI G LPASSYFCRGPEA+SH VC** Q* A *KW+HTA H G +DLPS +*
Sbjct: 12 GLCIPGAQLPASSYFCRGPEATSH*AVC**PQ*PAYS**KWKHTAWHRG*FQDLPSYGI* 191
Query: 632 FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHVCQVHTLSINRSSCILCS 453
FLPV PC HSGNKP C L C VG*EQ+Y * A+S +Q VLHV VH+L +N + ILCS
Sbjct: 192 FLPV*PCRHSGNKPPCSLPCPVG*EQVYS**AADSDKQPVLHVR*VHSLRVNCAPGILCS 371
Query: 452 SGSLPSSVLHGARYK*QRICG 390
SGSLPSS+LHGARY *Q + G
Sbjct: 372 SGSLPSSLLHGARYL*QWVNG 434
Score = 167 bits (359), Expect(2) = 1e-048
Identities = 77/99 (77%), Positives = 79/99 (79%)
Frame = +3 / -2
Query: 390 ATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLFSSH 569
A DPLS VSGSM* GGTIDTERVHLAYV*H+L VRVC+ SAVNLFSSH
Sbjct: 434 AIDPLSEVSGSM*KRARKAAR*A*YAGGTIDTERVHLAYV*HRLFVRVCSSSAVNLFSSH 255
Query: 570 RT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
RT * AGRLVP*MPAWLHR*KSNSVGWQI ESTTVPGSM
Sbjct: 254 RTW**AGRLVP*MPAWLHR*KSNSVGWQILESTTVPGSM 138
Score = 48.3 bits (99), Expect(2) = 1e-048
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +3 / -2
Query: 741 V**RFWTTTKVTGGW*SDSNDAQAF 815
V* RFWTTTKVTGGW* S DAQA+
Sbjct: 83 V*CRFWTTTKVTGGW*LGSRDAQAY 9
>gb|AW564753.1|AW564753 LG1_301_D09.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 432
Score = 337 bits (730), Expect = 2e-091
Identities = 133/140 (95%), Positives = 135/140 (96%)
Frame = -2 / +1
Query: 811 ACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFD 632
ACASLE +YQPPVTFVVVQKRHHTRLF NNHNDQR DRSGNILPGTVVDSKICHPTEFD
Sbjct: 13 ACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTEFD 192
Query: 631 FYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAH 452
FYLCSHAGIQGTSRPAHYHVLWDENKFTAD LQTLTNNLCYTYARCTRSVSIVPPAYYAH
Sbjct: 193 FYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAH 372
Query: 451 LAAFRARFYMEPDTSDSGSV 392
LAAFRARFYMEPDTSDSGS+
Sbjct: 373 LAAFRARFYMEPDTSDSGSM 432
Score = 222 bits (479), Expect = 7e-057
Identities = 98/143 (68%), Positives = 114/143 (79%)
Frame = +2 / -1
Query: 392 HRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPISRKFVLIPQ 571
H V IWLHV+ SSEGCQMSIVCR ++*+ A AP +RV QVV +SLQ IS K VLIPQ
Sbjct: 432 H*PTVRGIWLHVEASSEGCQMSIVCRGHN*HGASAPSVRVAQVVCQSLQLISCKLVLIPQ 253
Query: 572 NMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATSIGSTLIIVIINKQPGVMT 751
+M+M R ACSLNA MA QVEIK MANL ++H ARQYV+TSI TL+IV+I+KQP VM+
Sbjct: 252 DMVMSRAACSLNAGMATQVEIKFRRMANLGINHGARQYVSTSINCTLVIVVISKQPSVMS 73
Query: 752 LLDHDKSNWRLVIRLQ*CTGLSN 820
LLDHDKSNWRLVI LQ CTGLS+
Sbjct: 72 LLDHDKSNWRLVIGLQGCTGLSS 4
Score = 219 bits (472), Expect = 7e-056
Identities = 90/137 (65%), Positives = 99/137 (72%)
Frame = +1 / -3
Query: 403 CHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPTEHDN 582
C YLAPC++ELGRLPDEHSM +L S CT TC+T C E A HQ * CSHPT H N
Sbjct: 421 CQRYLAPCRSELGRLPDEHSMPGAQLTRSECT*RTCSTGCLSESAAHQL*TCSHPTGHGN 242
Query: 583 GQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHADHCDY*QTTWCDDASGP 762
Q GLFPEC+HG TGRNQ DGKS + P+C AVC HFY+ +A HC Y*QT CD ASGP
Sbjct: 241 EQGGLFPECRHGYTGRNQIP*DGKSWNQPRCQAVCFHFYQLYAGHCGY*QTA*CDVASGP 62
Query: 763 RQK*LEAGNQTPMMHRP 813
RQK*LEAGN P MHRP
Sbjct: 61 RQK*LEAGNWAPGMHRP 11
Score = 204 bits (440), Expect = 2e-051
Identities = 94/138 (68%), Positives = 100/138 (72%)
Frame = -3 / +2
Query: 816 ERPVHHWSLITSLQLLLSWSRSVITPGCLLIITMISVLPIEVATYCRALWWTQRFAIQPS 637
+RPVH WS ITSLQLLLSWSRS IT GCLLI TM SV IEV TYC A W RFAI +
Sbjct: 8 DRPVHPWSPITSLQLLLSWSRSDITLGCLLITTMTSVQLIEVETYCLAPWLIPRFAILRN 187
Query: 636 LISTCAAMLAFREQAVLPIIMFCGMRTNLRLMGCKLSPTTCVTRMPGAHAQYQSFLLHTM 457
LISTC AM AFREQA L I M CGMRT+L+LM C+L TTC TR GA A Q HTM
Sbjct: 188 LISTCVAMPAFREQAALLITMSCGMRTSLQLMSCRL*QTTCATRTLGALAPCQLCPRHTM 367
Query: 456 LIWQPSELGFTWSQIQVT 403
LIWQPSEL TWSQI +T
Sbjct: 368 LIWQPSELASTWSQIPLT 421
Score = 199 bits (429), Expect = 6e-050
Identities = 92/137 (67%), Positives = 103/137 (75%)
Frame = -1 / +3
Query: 812 GLCIIGV*LPASSYFCRGPEASSHQVVC**SQ*SACCR*KWQHTAGHCGGLKDLPSNRV* 633
GLCI G LPASSYFCRGPEA+SH VC** Q* A *KW+HTA H G +DLPS +*
Sbjct: 12 GLCIPGAQLPASSYFCRGPEATSH*AVC**PQ*PAYS**KWKHTAWHRG*FQDLPSYGI* 191
Query: 632 FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHVCQVHTLSINRSSCILCS 453
FLPV PC HSGNKP C L C VG*EQ+Y * A+S +Q VLHV VH+L +N + ILCS
Sbjct: 192 FLPV*PCRHSGNKPPCSLPCPVG*EQVYS**AADSDKQPVLHVR*VHSLRVNCAPGILCS 371
Query: 452 SGSLPSSVLHGARYK*Q 402
SGSLPSS+LHGARY *Q
Sbjct: 372 SGSLPSSLLHGARYL*Q 422
Score = 166 bits (356), Expect(2) = 3e-048
Identities = 76/97 (78%), Positives = 78/97 (80%)
Frame = +3 / -2
Query: 396 DPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT 575
DPLS VSGSM* GGTIDTERVHLAYV*H+L VRVC+ SAVNLFSSHRT
Sbjct: 428 DPLSEVSGSM*KRARKAAR*A*YAGGTIDTERVHLAYV*HRLFVRVCSSSAVNLFSSHRT 249
Query: 576 **WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
* AGRLVP*MPAWLHR*KSNSVGWQI ESTTVPGSM
Sbjct: 248 W**AGRLVP*MPAWLHR*KSNSVGWQILESTTVPGSM 138
Score = 48.3 bits (99), Expect(2) = 3e-048
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +3 / -2
Query: 741 V**RFWTTTKVTGGW*SDSNDAQAF 815
V* RFWTTTKVTGGW* S DAQA+
Sbjct: 83 V*CRFWTTTKVTGGW*LGSRDAQAY 9
>gb|BE593115.1|BE593115 WS1_97_F09.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 599
Score = 264 bits (572), Expect(2) = 1e-083
Identities = 104/107 (97%), Positives = 106/107 (99%)
Frame = -2 / +1
Query: 682 LPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTY 503
LPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTY
Sbjct: 1 LPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTY 180
Query: 502 ARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGP 362
ARCTRSVSIVPPAYYAHLAAFRARFYMEPDT+DSGS+ASGATTSR P
Sbjct: 181 ARCTRSVSIVPPAYYAHLAAFRARFYMEPDTTDSGSMASGATTSRAP 321
Score = 206 bits (444), Expect(2) = 2e-072
Identities = 84/106 (79%), Positives = 90/106 (84%)
Frame = -1 / +3
Query: 680 AGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHVC 501
A +CGGLKDLPSN +*FLP+ PCWHSGNKP CPLSC VG*EQIY WVANSHQQ VLHVC
Sbjct: 3 AWYCGGLKDLPSN*I*FLPL*PCWHSGNKPPCPLSCPVG*EQIYRGWVANSHQQPVLHVC 182
Query: 500 QVHTLSINRSSCILCSSGSLPSSVLHGARYK*QRICGERCYDKPWP 363
VH+LSINRSSCILCS GSLPSS+LHGA Y *Q + GE CYDKP P
Sbjct: 183 *VHSLSINRSSCILCSPGSLPSSLLHGAGYH*QWVYGEWCYDKPCP 320
Score = 205 bits (442), Expect(3) = 7e-070
Identities = 82/112 (73%), Positives = 88/112 (78%)
Frame = +1 / -2
Query: 346 CAPLVEGHGLS*HRSPQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW 525
C + GHGLS*H SP C Y APC++ELGRLP EH+MQEERLILS CT HTCNT CW
Sbjct: 337 CCVPLLGHGLS*HHSP*THCQWYPAPCRSELGRLPGEHNMQEERLILSECT*HTCNTGCW 158
Query: 526 *EFATHQP*ICSHPTEHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPA 681
*EFATH *ICSHPT HDNGQ GLFPECQHG GRNQ +LDG+SLSPPQ A
Sbjct: 157 *EFATHPR*ICSHPTGHDNGQGGLFPECQHGYRGRNQIQLDGRSLSPPQYQA 2
Score = 198 bits (426), Expect(2) = 9e-068
Identities = 88/106 (83%), Positives = 90/106 (84%)
Frame = +3 / -1
Query: 363 GPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNP 542
G RLVVAPLA DPLS+VSGSM* GGTIDTERVHLAYV*H+LLVRVCNP
Sbjct: 320 GARLVVAPLAIDPLSVVSGSM*KRARKAAR*A*YAGGTIDTERVHLAYV*HRLLVRVCNP 141
Query: 543 SAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPG 680
SAVNLFSSHRT**WAGRLVP*MPAWL R*KSNSVGWQIFESTTVPG
Sbjct: 140 SAVNLFSSHRT**WAGRLVP*MPAWLQR*KSNSVGWQIFESTTVPG 3
Score = 194 bits (418), Expect(2) = 1e-061
Identities = 82/105 (78%), Positives = 85/105 (80%)
Frame = -3 / +2
Query: 681 CRALWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTNLRLMGCKLSPTTCVTRM 502
C LWWTQR AIQ +LIST AMLAFREQA LPIIM CGMRTNL MGCKLSPTTCVTRM
Sbjct: 2 CLVLWWTQRSAIQLNLISTSVAMLAFREQAALPIIMSCGMRTNLPRMGCKLSPTTCVTRM 181
Query: 501 PGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLWRAVLRQAV 367
GA AQYQSFLLH ML WQPSEL TWS+I +T LWR VLRQAV
Sbjct: 182 LGALAQYQSFLLHIMLTWQPSELASTWSRIPLTVGLWRVVLRQAV 316
Score = 193 bits (415), Expect(2) = 2e-062
Identities = 83/105 (79%), Positives = 90/105 (85%)
Frame = +2 / -3
Query: 368 TACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPIS 547
TACRST RHR V+ I LHV+ SSEGCQ+SI+CRRND*Y*A AP IRVTQVVGESLQPI
Sbjct: 315 TACRSTTRHRPTVSGIRLHVEASSEGCQVSIICRRND*Y*ASAPSIRVTQVVGESLQPIR 136
Query: 548 RKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQ 682
KFVLIPQ+MIMGR ACSLNASMA +VEIK WMA+L*VHHS RQ
Sbjct: 135 GKFVLIPQDMIMGRAACSLNASMATEVEIKFSWMADL*VHHSTRQ 1
Score = 88.6 bits (187), Expect(2) = 2e-072
Identities = 37/51 (72%), Positives = 40/51 (78%)
Frame = -2 / +1
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC*D*RCADAV 236
+ T+ P GARNTRAG NVAVRPLPALKENVKRVMFYC*D*RC A+
Sbjct: 292 ASGATTSRAPGGARNTRAGVGNVAVRPLPALKENVKRVMFYC*D*RCEQAI 444
Score = 81.3 bits (171), Expect(2) = 9e-068
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = +3 / -1
Query: 234 LTASAQRQS*Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLV 377
+ A +QRQS*Q*NMTRFTFSLRAGNGLTATF PALVLRAP G +V
Sbjct: 446 IIACSQRQS*Q*NMTRFTFSLRAGNGLTATFPTPALVLRAPPGARLVV 303
Score = 77.6 bits (163), Expect(3) = 7e-070
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1 / -2
Query: 250 SVNLSSRT*RASRFP*GQVMASQQHLQHQPWCCAPLV 360
SVNLS+RT* ASRFP*G VMAS+QH QHQPWCC PL+
Sbjct: 430 SVNLSNRT*HASRFP*GPVMASRQHFQHQPWCCVPLL 320
Score = 68.4 bits (143), Expect(2) = 2e-062
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = +2 / -3
Query: 266 VEHDALHVFLEGR*WPHSNICSTSPGVARPWW 361
+EHD LHVFLEGR*WPH NI +TSPGVA P W
Sbjct: 414 IEHDTLHVFLEGR*WPHGNISNTSPGVACPSW 319
Score = 67.0 bits (140), Expect(2) = 1e-083
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = -3 / +2
Query: 357 QGRATPGLVLQMLL*GHYLPSRKT*SASCSTAKIDA 250
+G ATPGLVL+ML *GHY PSRKT*S SCS AKIDA
Sbjct: 323 EGHATPGLVLEMLP*GHYRPSRKT*SVSCSIAKIDA 430
Score = 64.3 bits (134), Expect(2) = 1e-061
Identities = 24/29 (82%), Positives = 24/29 (82%)
Frame = -1 / +3
Query: 356 RGAQHQGWCCKCCCEAITCPQGKREARHV 270
RG QHQGWC KCC EAIT PQGKREA HV
Sbjct: 324 RGTQHQGWCWKCCREAITGPQGKREACHV 410
Score = 22.1 bits (42), Expect(3) = 7e-070
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / -3
Query: 222 DNCLLTAS 245
DNCLLTAS
Sbjct: 447 DNCLLTAS 424
>gb|BE359363.1|BE359363 DG1_40_D01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 678
Score = 270 bits (585), Expect(2) = 8e-081
Identities = 106/114 (92%), Positives = 110/114 (96%)
Frame = -2 / +1
Query: 724 NHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTA 545
NHNDQ + DRSGNILPGTVVDSKICHPTEFDFYLCSHAGI+GTSRPAHYHVLWDEN F+A
Sbjct: 1 NHNDQNSIDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIKGTSRPAHYHVLWDENNFSA 180
Query: 544 DGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
D LQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP+TSDSGSVASG
Sbjct: 181 DELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSVASG 342
Score = 156 bits (335), Expect(2) = 1e-041
Identities = 75/101 (74%), Positives = 78/101 (77%)
Frame = +3 / -2
Query: 384 PLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLFS 563
PLATDPLS VSGSM* GGTIDTERVHLA V* +L VRVCN SA LFS
Sbjct: 341 PLATDPLSEVSGSM*KRALKAAR*A*YAGGTIDTERVHLA*V*QRLFVRVCNSSAEKLFS 162
Query: 564 SHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
SH+T** AGRLVP MPAWLH+*KSNSVG QIFESTTVPGSM
Sbjct: 161 SHKT***AGRLVPLMPAWLHK*KSNSVG*QIFESTTVPGSM 39
Score = 125 bits (268), Expect(3) = 4e-030
Identities = 60/114 (52%), Positives = 78/114 (68%)
Frame = +2 / -1
Query: 383 TARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPISRKFVL 562
T HRS V +W HVK S EG Q+SI+ ND Y A AP I VT+VV +SLQ +SR+ V
Sbjct: 342 TTCHRSTVRSLWFHVKTSPEGSQVSIIRWWNDRYRAGAPCISVTEVVCKSLQLVSREVVF 163
Query: 563 IPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATSIGSTLIIVI 724
IPQ+MIM TA +LNASMA QVE+K M +L +++S +YV+T + LIIV+
Sbjct: 162 IPQDMIMSWTASALNASMATQVEVKFSRMTDLRIYNSTWEYVSTPVN*ILIIVV 1
Score = 118 bits (253), Expect = 1e-025
Identities = 53/110 (48%), Positives = 61/110 (55%)
Frame = +1 / -3
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPT 570
P I C L PCK E R P EH+ ER I S CT H CN C *E AT Q C HPT
Sbjct: 334 PPIHCQKSLVPCKNEP*RQPGEHNTLVERSIQSGCTLHKCNRGCL*ESATRQQRSCFHPT 155
Query: 571 EHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHADHC 720
HDN DG P CQHG T R+Q + D +S + Q VC H + ++DHC
Sbjct: 154 RHDNELDG*CP*CQHGYTSRSQIQ*DDRSSNLQQYLGVCFHSCQLNSDHC 5
Score = 115 bits (246), Expect(2) = 1e-025
Identities = 61/134 (45%), Positives = 74/134 (55%)
Frame = -3 / +2
Query: 720 TMISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTNLRLM 541
TMI + V TY + L +R I +L STC AMLA R AV IIM CGM+T L
Sbjct: 5 TMIRIQLTGVETYSQVLL*IRRSVILLNLTSTCVAMLALRALAVQLIIMSCGMKTTSLLT 184
Query: 540 GCKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLWRAVLRQAVAL 361
C+L TT VT M GA A Y+SF ML W PS L FTW+Q +T D W+ VL+
Sbjct: 185 SCRLLQTTSVTLMQGAPALYRSFHQRIMLTWLPSGLVFTWNQRLLTVDRWQVVLQAVDLS 364
Query: 360 HQGRATPGLVLQML 319
A LV+Q+L
Sbjct: 365 QHPIALGPLVVQLL 406
Score = 113 bits (241), Expect = 5e-024
Identities = 52/103 (50%), Positives = 70/103 (67%)
Frame = -1 / +3
Query: 695 KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQL 516
+W+HT +C +DL S +* L V PCWH G+ PS LSC VG*+Q+ * VA+S++Q
Sbjct: 30 EWKHTPRYCCRFEDLSSY*I*LLLV*PCWH*GH*PSSSLSCLVG*KQLLC*RVADSYKQP 209
Query: 515 VLHVCQVHTLSINRSSCILCSSGSLPSSVLHGARYK*QRICGE 387
+LH+C+VH L I+RS+ +LCS G L S LHG R *Q I G+
Sbjct: 210 LLHLCKVHPLCIDRSTSVLCSPGCLQGSFLHGTRDF*QWIGGK 338
Score = 51.9 bits (107), Expect(2) = 8e-081
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = -2 / +1
Query: 361 PPGARNTRAGAANVAVRPLPALKENVKRVMFYC*D*RCADAVSKQLSLW 215
P A ++ AVRPLPALK+NVKRVMFYC* * A V ++++
Sbjct: 358 PQSASHSTRAPGGAAVRPLPALKDNVKRVMFYC*G*AGALMVPSLVNMF 504
Score = 35.4 bits (71), Expect(2) = 1e-041
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = +3 / -2
Query: 237 TASAQRQS*Q*NMTRFTFSLRAGNGLTA 320
T SA Q*NMT FT S RAG+GLTA
Sbjct: 482 TISAPA*PQQ*NMTLFTLSFRAGSGLTA 399
Score = 27.6 bits (54), Expect(3) = 4e-030
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2 / -1
Query: 266 VEHDALHVFLEGR*WPHS 319
VEHD L+V L+ WP+S
Sbjct: 453 VEHDPLYVILQSWKWPNS 400
Score = 22.6 bits (43), Expect(2) = 1e-025
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3 / +2
Query: 330 LQMLL*GHYLPSRKT*SASCSTAK 259
L + L GH+ R T* SCSTA+
Sbjct: 389 LVVQLLGHFQL*RIT*RGSCSTAE 460
Score = 21.7 bits (41), Expect(3) = 4e-030
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1 / -3
Query: 337 PWCCAPLVEGHGLS*HRSP 393
P C L E HGL H P
Sbjct: 385 PECYGMLTEVHGLQDHLPP 329
>gb|BE595663.1|BE595663 PI1_55_A07.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 403
Score = 254 bits (549), Expect(2) = 2e-078
Identities = 101/105 (96%), Positives = 103/105 (98%)
Frame = -2 / +3
Query: 676 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYAR 497
GTVVDSKI HPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYAR
Sbjct: 3 GTVVDSKIGHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYAR 182
Query: 496 CTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGP 362
CTRSVSIVPPAYYAHLAAFRARFYMEPDT+DSGS+ASGATTSR P
Sbjct: 183 CTRSVSIVPPAYYAHLAAFRARFYMEPDTTDSGSMASGATTSRAP 317
Score = 204 bits (441), Expect(2) = 5e-064
Identities = 81/109 (74%), Positives = 87/109 (79%)
Frame = +1 / -2
Query: 346 CAPLVEGHGLS*HRSPQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW 525
C + GHGLS*H SP C Y APC++ELGRLP EH+MQEERLILS CT HTCNT CW
Sbjct: 333 CCVPLLGHGLS*HHSP*THCQWYPAPCRSELGRLPGEHNMQEERLILSECT*HTCNTGCW 154
Query: 526 *EFATHQP*ICSHPTEHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQ 672
*EFATH *ICSHPT HDNGQ GLFPECQHG GRNQ +LDG+SLSPPQ
Sbjct: 153 *EFATHPR*ICSHPTGHDNGQGGLFPECQHGYRGRNQIQLDGRSLSPPQ 7
Score = 202 bits (436), Expect(2) = 1e-059
Identities = 82/104 (78%), Positives = 88/104 (84%)
Frame = -1 / +2
Query: 674 HCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHVCQV 495
+CGGLKD PSN +*FLP+ PCWHSGNKP CPLSC VG*EQIY WVANSHQQ VLHVC V
Sbjct: 5 YCGGLKDRPSN*I*FLPL*PCWHSGNKPPCPLSCPVG*EQIYRGWVANSHQQPVLHVC*V 184
Query: 494 HTLSINRSSCILCSSGSLPSSVLHGARYK*QRICGERCYDKPWP 363
H+LSINRSSCILCS GSLPSS+LHGA Y *Q + GE CYDKP P
Sbjct: 185 HSLSINRSSCILCSPGSLPSSLLHGAGYH*QWVYGEWCYDKPCP 316
Score = 192 bits (414), Expect(2) = 3e-059
Identities = 86/105 (81%), Positives = 88/105 (83%)
Frame = +3 / -1
Query: 363 GPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNP 542
G RLVVAPLA DPLS+VSGSM* GGTIDTERVHLAYV*H+LLVRVCNP
Sbjct: 316 GARLVVAPLAIDPLSVVSGSM*KRARKAAR*A*YAGGTIDTERVHLAYV*HRLLVRVCNP 137
Query: 543 SAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVP 677
SAVNLFSSHRT**WAGRLVP*MPAWL R*KSNSVGW IFESTTVP
Sbjct: 136 SAVNLFSSHRT**WAGRLVP*MPAWLQR*KSNSVGWPIFESTTVP 2
Score = 191 bits (411), Expect(2) = 3e-059
Identities = 81/102 (79%), Positives = 84/102 (82%)
Frame = -3 / +1
Query: 672 LWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTNLRLMGCKLSPTTCVTRMPGA 493
LWWTQR AIQ +LIST AMLAFREQA LPIIM CGMRTNL MGCKLSPTTCVTRM GA
Sbjct: 7 LWWTQRSAIQLNLISTSVAMLAFREQAALPIIMSCGMRTNLPRMGCKLSPTTCVTRMLGA 186
Query: 492 HAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLWRAVLRQAV 367
AQYQSFLLH ML WQPSEL TWS+I +T LWR VLRQAV
Sbjct: 187 LAQYQSFLLHIMLTWQPSELASTWSRIPLTVGLWRVVLRQAV 312
Score = 188 bits (405), Expect(2) = 9e-058
Identities = 81/102 (79%), Positives = 88/102 (86%)
Frame = +2 / -3
Query: 368 TACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPIS 547
TACRST RHR V+ I LHV+ SSEGCQ+SI+CRRND*Y*A AP IRVTQVVGESLQPI
Sbjct: 311 TACRSTTRHRPTVSGIRLHVEASSEGCQVSIICRRND*Y*ASAPSIRVTQVVGESLQPIR 132
Query: 548 RKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHS 673
KFVLIPQ+MIMGR ACSLNASMA +VEIK WMA+L*VHHS
Sbjct: 131 GKFVLIPQDMIMGRAACSLNASMATEVEIKFSWMADL*VHHS 6
Score = 62.0 bits (129), Expect(2) = 5e-064
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +1 / -2
Query: 280 ASRFP*GQVMASQQHLQHQPWCCAPLV 360
ASRFP*G VMAS+QH QHQPWCC PL+
Sbjct: 396 ASRFP*GPVMASRQHFQHQPWCCVPLL 316
Score = 60.2 bits (125), Expect(2) = 2e-078
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -1 / +2
Query: 356 RGAQHQGWCCKCCCEAITCPQGKREA 279
RG QHQGWC KCC EAIT PQGKREA
Sbjct: 320 RGTQHQGWCWKCCREAITGPQGKREA 397
Score = 59.7 bits (124), Expect(2) = 3e-059
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = -2 / +3
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKR 278
+ T+ P GARNTRAG NVAVRPLPALKENVK+
Sbjct: 288 ASGATTSRAPGGARNTRAGVGNVAVRPLPALKENVKQ 398
Score = 58.3 bits (121), Expect(2) = 3e-059
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = +2 / -3
Query: 281 LHVFLEGR*WPHSNICSTSPGVARPWW 361
LHVFLEGR*WPH NI +TSPGVA P W
Sbjct: 395 LHVFLEGR*WPHGNISNTSPGVACPSW 315
Score = 57.4 bits (119), Expect(2) = 9e-058
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = +3 / -1
Query: 282 FTFSLRAGNGLTATFAAPALVLRAPGGGPRLV 377
FTFSLRAGNGLTATF PALVLRAP G +V
Sbjct: 394 FTFSLRAGNGLTATFPTPALVLRAPPGARLVV 299
Score = 49.6 bits (102), Expect(2) = 1e-059
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = -3 / +1
Query: 357 QGRATPGLVLQMLL*GHYLPSRKT*SA 277
+G ATPGLVL+ML *GHY PSRKT*S+
Sbjct: 319 EGHATPGLVLEMLP*GHYRPSRKT*SS 399
>gb|BF587838.1|BF587838 FM1_33_F06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 437
Score = 261 bits (565), Expect(2) = 8e-074
Identities = 103/111 (92%), Positives = 107/111 (96%)
Frame = -2 / +3
Query: 715 DQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGL 536
DQ + DRSGNILPGTVVDSKICHPTEFDFYLCSHAGI+GTSRPAHYHVLWDEN F+AD L
Sbjct: 3 DQNSIDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIKGTSRPAHYHVLWDENNFSADEL 182
Query: 535 QTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
QTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP+TSDSGSVASG
Sbjct: 183 QTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSVASG 335
Score = 156 bits (335), Expect(3) = 2e-038
Identities = 75/101 (74%), Positives = 78/101 (77%)
Frame = +3 / -2
Query: 384 PLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLFS 563
PLATDPLS VSGSM* GGTIDTERVHLA V* +L VRVCN SA LFS
Sbjct: 334 PLATDPLSEVSGSM*KRALKAAR*A*YAGGTIDTERVHLA*V*QRLFVRVCNSSAEKLFS 155
Query: 564 SHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
SH+T** AGRLVP MPAWLH+*KSNSVG QIFESTTVPGSM
Sbjct: 154 SHKT***AGRLVPLMPAWLHK*KSNSVG*QIFESTTVPGSM 32
Score = 120 bits (257), Expect = 3e-026
Identities = 58/111 (52%), Positives = 75/111 (67%)
Frame = +2 / -1
Query: 383 TARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPISRKFVL 562
T HRS V +W HVK S EG Q+SI+ ND Y A AP I VT+VV +SLQ +SR+ V
Sbjct: 335 TTCHRSTVRSLWFHVKTSPEGSQVSIIRWWNDRYRAGAPCISVTEVVCKSLQLVSREVVF 156
Query: 563 IPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATSIGSTLI 715
IPQ+MIM TA +LNASMA QVE+K M +L +++S +YV+T + LI
Sbjct: 155 IPQDMIMSWTASALNASMATQVEVKFSRMTDLRIYNSTWEYVSTPVN*ILI 3
Score = 114 bits (244), Expect = 2e-024
Identities = 52/109 (47%), Positives = 60/109 (55%)
Frame = +1 / -3
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPT 570
P I C L PCK E R P EH+ ER I S CT H CN C *E AT Q C HPT
Sbjct: 327 PPIHCQKSLVPCKNEP*RQPGEHNTLVERSIQSGCTLHKCNRGCL*ESATRQQRSCFHPT 148
Query: 571 EHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHADH 717
HDN DG P CQHG T R+Q + D +S + Q VC H + ++DH
Sbjct: 147 RHDNELDG*CP*CQHGYTSRSQIQ*DDRSSNLQQYLGVCFHSCQLNSDH 1
Score = 113 bits (241), Expect = 5e-024
Identities = 52/103 (50%), Positives = 70/103 (67%)
Frame = -1 / +2
Query: 695 KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQL 516
+W+HT +C +DL S +* L V PCWH G+ PS LSC VG*+Q+ * VA+S++Q
Sbjct: 23 EWKHTPRYCCRFEDLSSY*I*LLLV*PCWH*GH*PSSSLSCLVG*KQLLC*RVADSYKQP 202
Query: 515 VLHVCQVHTLSINRSSCILCSSGSLPSSVLHGARYK*QRICGE 387
+LH+C+VH L I+RS+ +LCS G L S LHG R *Q I G+
Sbjct: 203 LLHLCKVHPLCIDRSTSVLCSPGCLQGSFLHGTRDF*QWIGGK 331
Score = 113 bits (241), Expect = 5e-024
Identities = 60/133 (45%), Positives = 73/133 (54%)
Frame = -3 / +1
Query: 717 MISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTNLRLMG 538
MI + V TY + L +R I +L STC AMLA R AV IIM CGM+T L
Sbjct: 1 MIRIQLTGVETYSQVLL*IRRSVILLNLTSTCVAMLALRALAVQLIIMSCGMKTTSLLTS 180
Query: 537 CKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLWRAVLRQAVALH 358
C+L TT VT M GA A Y+SF ML W PS L FTW+Q +T D W+ VL+
Sbjct: 181 CRLLQTTSVTLMQGAPALYRSFHQRIMLTWLPSGLVFTWNQRLLTVDRWQVVLQAVDLSQ 360
Query: 357 QGRATPGLVLQML 319
A LV+Q+L
Sbjct: 361 HPIALGPLVVQLL 399
Score = 37.7 bits (76), Expect(2) = 8e-074
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2 / +3
Query: 361 PPGARNTRAGAANVAVRPLPALKENVKRV 275
P A ++ AVRPLPA+K+NVKRV
Sbjct: 351 PQSASHSTRAPGGAAVRPLPAMKDNVKRV 437
Score = 23.5 bits (45), Expect(3) = 2e-038
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3 / -2
Query: 276 TRFTFSLRAGNGLTA 320
T FT S AG+GLTA
Sbjct: 436 TLFTLSFIAGSGLTA 392
Score = 21.7 bits (41), Expect(3) = 2e-038
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1 / -3
Query: 337 PWCCAPLVEGHGLS*HRSP 393
P C L E HGL H P
Sbjct: 378 PECYGMLTEVHGLQDHLPP 322
>gb|CW410447.1|CW410447 fsbb001f105d07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f105d07, DNA
sequence
Length = 777
Score = 142 bits (305), Expect(4) = 7e-071
Identities = 53/59 (89%), Positives = 56/59 (94%)
Frame = -2 / +3
Query: 682 LPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYT 506
+ GTVVDSKICHPTEFDF+LCSHAGI+GTSRPAHYHVLWDEN FTAD LQTLTNNLCYT
Sbjct: 564 IAGTVVDSKICHPTEFDFFLCSHAGIKGTSRPAHYHVLWDENNFTADALQTLTNNLCYT 740
Score = 113 bits (242), Expect(3) = 7e-041
Identities = 50/59 (84%), Positives = 52/59 (88%)
Frame = +3 / -3
Query: 501 AYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVP 677
AYV* +LLVRVCN SAV LFSSH+T * AGRLVP MPAWLHR KSNSVGWQIFESTTVP
Sbjct: 745 AYV*QRLLVRVCNASAVKLFSSHKTW**AGRLVPLMPAWLHRKKSNSVGWQIFESTTVP 569
Score = 98.2 bits (208), Expect(4) = 7e-071
Identities = 37/46 (80%), Positives = 42/46 (91%)
Frame = -2 / +1
Query: 811 ACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPG 674
ACASLE++YQP VTF+VVQKRHHTRLF +NHNDQ + DRSGNILPG
Sbjct: 322 ACASLEANYQPQVTFIVVQKRHHTRLFAHNHNDQNSVDRSGNILPG 459
Score = 84.9 bits (179), Expect(3) = 9e-028
Identities = 33/57 (57%), Positives = 44/57 (77%)
Frame = -1 / +2
Query: 674 HCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHV 504
+C GL+DLP RV* LPVQPCWH G++PSC L C VG*+Q++ * +A+ +Q +LHV
Sbjct: 572 YCCGLEDLPPYRV*LLPVQPCWHQGHEPSCSLPCLVG*KQLHS*CIADPYQ*PLLHV 742
Score = 77.6 bits (163), Expect(3) = 1e-026
Identities = 32/56 (57%), Positives = 36/56 (64%)
Frame = +1 / -1
Query: 505 TCNTSCW*EFATHQP*ICSHPTEHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQ 672
TC+ W* A HQ * C HPT H + QDG P CQHGCTGR+QT G+S SP Q
Sbjct: 741 TCSKGYW*GSAMHQL*SCFHPTRHGSEQDGSCP*CQHGCTGRSQTL*GGRSSSPQQ 574
Score = 53.8 bits (111), Expect(4) = 7e-071
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = -2 / +3
Query: 889 IIFYRDGVSEGQFYQVLLYELDAIRK 812
+ F RDGVSEGQFYQVLL+ELDAIRK
Sbjct: 156 VTFDRDGVSEGQFYQVLLHELDAIRK 233
Score = 50.1 bits (103), Expect(3) = 7e-041
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +2 / -1
Query: 671 SARQYVATSIGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGL 814
+ R+YV T + LIIV++ +QP V+ LDHD+S+ LVI Q CT L
Sbjct: 462 TTRKYVPTPVD*ILIIVVVCEQPRVVPFLDHDESHLWLVICFQRCTRL 319
Score = 48.3 bits (99), Expect(3) = 1e-026
Identities = 21/44 (47%), Positives = 24/44 (54%)
Frame = +1 / -3
Query: 682 VCCHFYRQHADHCDY*QTTWCDDASGPRQK*LEAGNQTPMMHRP 813
VC H R ++DHC +TT C SGPR K GN P MH P
Sbjct: 451 VCSHSCRLNSDHCGCVRTTSCGAVSGPR*KSPVVGNLLPAMHTP 320
Score = 46.4 bits (95), Expect(3) = 9e-028
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = -1 / +3
Query: 812 GLCIIGV*LPASSYFCRGPEASSHQVVC**SQ*SACCR*KWQHTA 678
G+CI G LP + F RGPE + H+VV Q*S R +W+HT+
Sbjct: 321 GVCIAGSKLPTTGDFHRGPETAPHEVVRTQPQ*SEFSRQEWEHTS 455
Score = 43.7 bits (89), Expect(3) = 7e-041
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +3 / -3
Query: 813 FLMASSSYNRTW*NCPSLTPSL 878
F +AS+S +RTW*NCPSLTPSL
Sbjct: 232 FRIASNSCSRTW*NCPSLTPSL 167
Score = 33.1 bits (66), Expect(3) = 1e-026
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2 / -2
Query: 812 LSNGIKFVQQNLVELSLTDTIPVE 883
LS+ I+F+Q NLVEL T TIPV+
Sbjct: 233 LSDCIQFMQ*NLVELPFTHTIPVK 162
Score = 32.2 bits (64), Expect(4) = 7e-071
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = -2 / +1
Query: 916 RATGQKPKRIIFYR 875
R+TGQKP+RI+FYR
Sbjct: 31 RSTGQKPQRILFYR 72
Score = 31.8 bits (63), Expect(3) = 9e-028
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1 / +2
Query: 878 QGWCQ*GTVLPSSVVRT*CH*KG 810
QGWC+* VLPSS C+ KG
Sbjct: 167 QGWCE*RAVLPSSTA*IGCNPKG 235
>gb|CW410448.1|CW410448 fsbb001f105d07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f105d07, DNA
sequence
Length = 826
Score = 142 bits (305), Expect(4) = 2e-069
Identities = 53/59 (89%), Positives = 56/59 (94%)
Frame = -2 / -3
Query: 682 LPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYT 506
+ GTVVDSKICHPTEFDF+LCSHAGI+GTSRPAHYHVLWDEN FTAD LQTLTNNLCYT
Sbjct: 347 IAGTVVDSKICHPTEFDFFLCSHAGIKGTSRPAHYHVLWDENNFTADALQTLTNNLCYT 171
Score = 113 bits (242), Expect(4) = 3e-042
Identities = 50/59 (84%), Positives = 52/59 (88%)
Frame = +3 / +1
Query: 501 AYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVP 677
AYV* +LLVRVCN SAV LFSSH+T * AGRLVP MPAWLHR KSNSVGWQIFESTTVP
Sbjct: 166 AYV*QRLLVRVCNASAVKLFSSHKTW**AGRLVPLMPAWLHRKKSNSVGWQIFESTTVP 342
Score = 98.2 bits (208), Expect(4) = 2e-069
Identities = 37/46 (80%), Positives = 42/46 (91%)
Frame = -2 / -1
Query: 811 ACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPG 674
ACASLE++YQP VTF+VVQKRHHTRLF +NHNDQ + DRSGNILPG
Sbjct: 589 ACASLEANYQPQVTFIVVQKRHHTRLFAHNHNDQNSVDRSGNILPG 452
Score = 84.9 bits (179), Expect(3) = 9e-028
Identities = 33/57 (57%), Positives = 44/57 (77%)
Frame = -1 / -2
Query: 674 HCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHV 504
+C GL+DLP RV* LPVQPCWH G++PSC L C VG*+Q++ * +A+ +Q +LHV
Sbjct: 339 YCCGLEDLPPYRV*LLPVQPCWHQGHEPSCSLPCLVG*KQLHS*CIADPYQ*PLLHV 169
Score = 77.6 bits (163), Expect(3) = 3e-025
Identities = 32/56 (57%), Positives = 36/56 (64%)
Frame = +1 / +2
Query: 505 TCNTSCW*EFATHQP*ICSHPTEHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQ 672
TC+ W* A HQ * C HPT H + QDG P CQHGCTGR+QT G+S SP Q
Sbjct: 170 TCSKGYW*GSAMHQL*SCFHPTRHGSEQDGSCP*CQHGCTGRSQTL*GGRSSSPQQ 337
Score = 53.8 bits (111), Expect(4) = 2e-069
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = -2 / -3
Query: 889 IIFYRDGVSEGQFYQVLLYELDAIRK 812
+ F RDGVSEGQFYQVLL+ELDAIRK
Sbjct: 755 VTFDRDGVSEGQFYQVLLHELDAIRK 678
Score = 50.1 bits (103), Expect(4) = 3e-042
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +2 / +2
Query: 671 SARQYVATSIGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGL 814
+ R+YV T + LIIV++ +QP V+ LDHD+S+ LVI Q CT L
Sbjct: 449 TTRKYVPTPVD*ILIIVVVCEQPRVVPFLDHDESHLWLVICFQRCTRL 592
Score = 48.3 bits (99), Expect(3) = 3e-025
Identities = 21/44 (47%), Positives = 24/44 (54%)
Frame = +1 / +1
Query: 682 VCCHFYRQHADHCDY*QTTWCDDASGPRQK*LEAGNQTPMMHRP 813
VC H R ++DHC +TT C SGPR K GN P MH P
Sbjct: 460 VCSHSCRLNSDHCGCVRTTSCGAVSGPR*KSPVVGNLLPAMHTP 591
Score = 46.4 bits (95), Expect(3) = 9e-028
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = -1 / -3
Query: 812 GLCIIGV*LPASSYFCRGPEASSHQVVC**SQ*SACCR*KWQHTA 678
G+CI G LP + F RGPE + H+VV Q*S R +W+HT+
Sbjct: 590 GVCIAGSKLPTTGDFHRGPETAPHEVVRTQPQ*SEFSRQEWEHTS 456
Score = 43.7 bits (89), Expect(4) = 3e-042
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +3 / +1
Query: 813 FLMASSSYNRTW*NCPSLTPSL 878
F +AS+S +RTW*NCPSLTPSL
Sbjct: 679 FRIASNSCSRTW*NCPSLTPSL 744
Score = 33.1 bits (66), Expect(3) = 3e-025
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2 / +3
Query: 812 LSNGIKFVQQNLVELSLTDTIPVE 883
LS+ I+F+Q NLVEL T TIPV+
Sbjct: 678 LSDCIQFMQ*NLVELPFTHTIPVK 749
Score = 31.8 bits (63), Expect(3) = 9e-028
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1 / -2
Query: 878 QGWCQ*GTVLPSSVVRT*CH*KG 810
QGWC+* VLPSS C+ KG
Sbjct: 744 QGWCE*RAVLPSSTA*IGCNPKG 676
Score = 27.2 bits (53), Expect(4) = 2e-069
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / -2
Query: 520 NLCYTYARCTRSVSI 476
N +YARCTRSVSI
Sbjct: 93 NCWCSYARCTRSVSI 49
Score = 22.1 bits (42), Expect(4) = 3e-042
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3 / +2
Query: 477 IDTERVHLA 503
+DTERVHLA
Sbjct: 50 MDTERVHLA 76
>gb|CF428487.1|CF428487 PH1_15_D10.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_15_D10_A002 5', mRNA sequence
Length = 509
Score = 258 bits (557), Expect = 1e-067
Identities = 102/117 (87%), Positives = 109/117 (93%)
Frame = -2 / +3
Query: 883 FYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRA 704
F DGVSEGQFYQVLLYEL+AIRKACASLE++YQP VTFVVVQKRHHTRLF +NHNDQ +
Sbjct: 159 FTGDGVSEGQFYQVLLYELNAIRKACASLEAEYQPKVTFVVVQKRHHTRLFAHNHNDQNS 338
Query: 703 ADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQ 533
DRSGNILPGTVVDSKICHPTEFDFYLCSHAGI+GTSRPAHYHVLWDEN F+AD LQ
Sbjct: 339 IDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIKGTSRPAHYHVLWDENNFSADELQ 509
Score = 134 bits (288), Expect = 2e-030
Identities = 60/120 (50%), Positives = 87/120 (72%)
Frame = +2 / -1
Query: 533 LQPISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATSIGSTL 712
LQ +SR+ V IPQ+MIM TA +LNASMA QVE+K M +L +++S +YV+T + L
Sbjct: 509 LQLVSREVVFIPQDMIMSWTASALNASMATQVEVKFSRMTDLRIYNSTWEYVSTPVN*IL 330
Query: 713 IIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVELSLTDTIPVEYDP 892
IIV+++K +M LL+H+KS+ LV+R Q TGLS+ ++ +QQNL++LS TDTIP + P
Sbjct: 329 IIVVVSK*SSMMALLNHNKSHLWLVLRFQGGTGLSDSVELIQQNLIKLSFTDTIPCKIVP 150
Score = 103 bits (220), Expect = 4e-021
Identities = 53/119 (44%), Positives = 71/119 (59%)
Frame = -1 / +2
Query: 890 DHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGPEASSHQVVC**SQ*S 711
+ +GWCQ* T+L SSVV + KGLC+ G +P FC G +A S+ ++C Q*S
Sbjct: 152 EQFYRGWCQ*RTILSSSVV*AQRYPKGLCLPGSGVPTKGDFCCGSKAPSY*IICSQPQ*S 331
Query: 710 ACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVA 534
+W+HT +C +DL S +* L V PCWH G+ PS LSC VG*+Q+ * VA
Sbjct: 332 EFN*QEWKHTPRYCCRFEDLSSY*I*LLLV*PCWH*GH*PSSSLSCLVG*KQLLC*RVA 508
Score = 102 bits (218), Expect = 7e-021
Identities = 51/114 (44%), Positives = 60/114 (52%)
Frame = +1 / -3
Query: 535 ATHQP*ICSHPTEHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHAD 714
AT Q C HPT HDN DG P CQHG T R+Q + D +S + Q VC H + ++D
Sbjct: 507 ATRQQRSCFHPTRHDNELDG*CP*CQHGYTSRSQIQ*DDRSSNLQQYLGVCFHSCQLNSD 328
Query: 715 HCDY*QTTWCDDASGPRQK*LEAGNQTPMMHRPF*WHQVRTTELGRTVPH*HHP 876
HC Q D A P+QK G P HRPF TTEL + V H*HHP
Sbjct: 327 HCGCEQII*YDGAFEPQQKSPLVGTPLPGRHRPFG*R*AHTTELDKIVLH*HHP 166
Score = 96.4 bits (204), Expect(2) = 2e-034
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = +3 / -2
Query: 534 CNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
CN SA LFSSH+T** AGRLVP MPAWLH+*KSNSVG QIFESTTVPGSM
Sbjct: 508 CNSSAEKLFSSHKT***AGRLVPLMPAWLHK*KSNSVG*QIFESTTVPGSM 356
Score = 71.2 bits (149), Expect(2) = 2e-034
Identities = 34/45 (75%), Positives = 36/45 (80%)
Frame = +3 / -2
Query: 741 V**RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPS 875
V* RF TTTKVT GW S S +AQAF +A SSYNRT *NCPSLTPS
Sbjct: 301 V*WRF*TTTKVTFGWYSASREAQAFRIALSSYNRT**NCPSLTPS 167
>gb|BG463628.1|BG463628 EM1_50_A05.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 611
Score = 240 bits (519), Expect(2) = 2e-067
Identities = 95/97 (97%), Positives = 96/97 (98%)
Frame = -2 / +1
Query: 670 VVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCT 491
VVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTAD LQTLTNNLCYTYARCT
Sbjct: 1 VVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCT 180
Query: 490 RSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGA 380
RSVSIVPPAYYAHLAAFRARFYMEPDTSDSGS+ASGA
Sbjct: 181 RSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASGA 291
Score = 160 bits (343), Expect(2) = 2e-051
Identities = 74/96 (77%), Positives = 76/96 (79%)
Frame = +3 / -1
Query: 381 APLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLF 560
APLA DPLS VSGSM* GGTIDTERVHLAYV*H+L VRVC+ SAVNLF
Sbjct: 290 APLAIDPLSEVSGSM*KRARKAAR*A*YAGGTIDTERVHLAYV*HRLFVRVCSSSAVNLF 111
Query: 561 SSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFEST 668
SSHRT * AGRLVP*MPAWLHR*KSNSVGWQI EST
Sbjct: 110 SSHRTW**AGRLVP*MPAWLHR*KSNSVGWQILEST 3
Score = 138 bits (296), Expect(2) = 5e-038
Identities = 57/93 (61%), Positives = 63/93 (67%)
Frame = +1 / -2
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPT 570
P C YLAPC++ELGRLPDEHSM +L S CT TC+T C E A HQ * CSHPT
Sbjct: 280 PLTHCQRYLAPCRSELGRLPDEHSMPGAQLTRSECT*RTCSTGCLSESAAHQL*TCSHPT 101
Query: 571 EHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPP 669
H N Q GLFPEC+HG TGRNQ DGKS + P
Sbjct: 100 GHGNEQGGLFPECRHGYTGRNQIP*DGKSWNQP 2
Score = 132 bits (283), Expect(2) = 5e-033
Identities = 60/93 (64%), Positives = 70/93 (75%)
Frame = +2 / -3
Query: 392 HRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPISRKFVLIPQ 571
H V IWLHV+ SSEGCQMSIVCR ++*+ A AP +RV QVV +SLQ IS K VLIPQ
Sbjct: 279 H*PTVRGIWLHVEASSEGCQMSIVCRGHN*HGASAPSVRVAQVVCQSLQLISCKLVLIPQ 100
Query: 572 NMIMGRTACSLNASMAAQVEIKLGWMANL*VHH 670
+M+M R ACSLNA MA QVEIK MANL ++H
Sbjct: 99 DMVMSRAACSLNAGMATQVEIKFRRMANLGINH 1
Score = 129 bits (277), Expect(2) = 4e-031
Identities = 59/94 (62%), Positives = 70/94 (74%)
Frame = -1 / +3
Query: 668 GGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHVCQVHT 489
G +DLPS +*FLPV PC HSGNKP C L C VG*EQ+Y * A+S +Q VLHV VH+
Sbjct: 3 G*FQDLPSYGI*FLPV*PCRHSGNKPPCSLPCPVG*EQVYS**AADSDKQPVLHVR*VHS 182
Query: 488 LSINRSSCILCSSGSLPSSVLHGARYK*QRICGE 387
L +N + ILCSSGSLPSS+LHGARY *Q + G+
Sbjct: 183 LRVNCAPGILCSSGSLPSSLLHGARYL*QWVNGQ 284
Score = 129 bits (277), Expect(2) = 2e-045
Identities = 58/93 (62%), Positives = 63/93 (67%)
Frame = -3 / +2
Query: 669 WWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTNLRLMGCKLSPTTCVTRMPGAH 490
W RFAI +LISTC AM AFREQA L I M CGMRT+L+LM C+L TTC TR GA
Sbjct: 2 WLIPRFAILRNLISTCVAMPAFREQAALLITMSCGMRTSLQLMSCRL*QTTCATRTLGAL 181
Query: 489 AQYQSFLLHTMLIWQPSELGFTWSQIQVTADLW 391
A Q HTMLIWQPSEL TWSQI +T W
Sbjct: 182 APCQLCPRHTMLIWQPSELASTWSQIPLTVGQW 280
Score = 74.8 bits (157), Expect(2) = 2e-045
Identities = 32/49 (65%), Positives = 36/49 (73%)
Frame = -2 / +1
Query: 406 DSGSVASGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
D+ S A+ +RGPPPG GA +VAVRPLPALKENVKRVMFYC*
Sbjct: 256 DTSDSGSMASGARGPPPGGARGIRGAGSVAVRPLPALKENVKRVMFYC* 402
Score = 64.8 bits (135), Expect(2) = 2e-051
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +3 / -1
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLVVA 383
Q*NMTRFTFSLRAG GLTAT AP + PGGGPR +A
Sbjct: 398 Q*NMTRFTFSLRAGRGLTATLPAPLMPRAPPGGGPRAPLA 279
Score = 41.4 bits (84), Expect(2) = 5e-038
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = +2 / -3
Query: 266 VEHDALHVFLEGR*WPHSNICSTSPGVARPWWRAT 370
V+HD LHVFLE * P N S WWR T
Sbjct: 396 VKHDTLHVFLESG*GPDRNTPGPSDAACPTWWRPT 292
Score = 37.7 bits (76), Expect(2) = 2e-067
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -1 / +3
Query: 371 PWPSTRGAQHQGWCCKCCCEAITCPQGKREARHV 270
PW STR +CC +A T QGKREA HV
Sbjct: 291 PWASTRWGTRHQRGRECCGQAPTRSQGKREACHV 392
Score = 30.4 bits (60), Expect(2) = 5e-033
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1 / -2
Query: 253 VNLSSRT*RASRFP*GQVMASQQH 324
+ LSS+T* ASRFP* +V A QH
Sbjct: 409 MQLSSKT*HASRFP*ERVGA*PQH 338
Score = 26.7 bits (52), Expect(2) = 4e-031
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3 / +2
Query: 312 GHYLPSRKT*SASCSTAKI 256
G Y SRKT*S SC TA++
Sbjct: 350 GPYPLSRKT*SVSCFTAEL 406
>gb|CF770746.1|CF770746 DSBF1_9_B10.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_9_B10_A010 3', mRNA sequence
Length = 548
Score = 199 bits (429), Expect(2) = 2e-066
Identities = 79/82 (96%), Positives = 81/82 (98%)
Frame = -2 / +3
Query: 607 IQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARF 428
IQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARF
Sbjct: 3 IQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARF 182
Query: 427 YMEPDTSDSGSVASGATTSRGP 362
YMEPDT+DSGS+ASGATTSR P
Sbjct: 183 YMEPDTTDSGSMASGATTSRAP 248
Score = 166 bits (357), Expect(2) = 1e-055
Identities = 66/88 (75%), Positives = 69/88 (78%)
Frame = +1 / -3
Query: 346 CAPLVEGHGLS*HRSPQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW 525
C + GHGLS*H SP C Y APCK+ELGRLP EH+MQEERLILS CT HTCNT CW
Sbjct: 264 CCVPLLGHGLS*HHSP*THCQWYPAPCKSELGRLPGEHNMQEERLILSECT*HTCNTGCW 85
Query: 526 *EFATHQP*ICSHPTEHDNGQDGLFPEC 609
*EFATH *ICSHPT HDNGQ GLFPEC
Sbjct: 84 *EFATHPR*ICSHPTGHDNGQGGLFPEC 1
Score = 159 bits (342), Expect(2) = 4e-048
Identities = 66/82 (80%), Positives = 69/82 (84%)
Frame = -1 / +2
Query: 608 HSGNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSV 429
HSGNKP CPLSC VG*EQIY WVANSHQQ VLHVC VH+LSINRSSCILCS GSLPSS+
Sbjct: 2 HSGNKPPCPLSCPVG*EQIYRGWVANSHQQPVLHVC*VHSLSINRSSCILCSPGSLPSSL 181
Query: 428 LHGARYK*QRICGERCYDKPWP 363
LHGA Y *Q + GE CYDKP P
Sbjct: 182 LHGAGYH*QWVYGEWCYDKPCP 247
Score = 158 bits (340), Expect(2) = 1e-047
Identities = 66/81 (81%), Positives = 68/81 (83%)
Frame = -3 / +1
Query: 609 AFREQAVLPIIMFCGMRTNLRLMGCKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELG 430
AFREQA LPIIM CGMRTNL MGCKLSPTTCVTRM GA AQYQSFLLH ML WQPSEL
Sbjct: 1 AFREQAALPIIMSCGMRTNLPRMGCKLSPTTCVTRMLGALAQYQSFLLHIMLTWQPSELA 180
Query: 429 FTWSQIQVTADLWRAVLRQAV 367
FTWS+I +T LWR VLRQAV
Sbjct: 181 FTWSRIPLTVGLWRVVLRQAV 243
Score = 150 bits (322), Expect(3) = 2e-047
Identities = 65/80 (81%), Positives = 69/80 (86%)
Frame = +2 / -1
Query: 368 TACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPIS 547
TACRST RHR V+ I LHVK SSEGCQ+SI+CRRND*Y*A AP IRVTQVVGESLQPI
Sbjct: 242 TACRSTTRHRPTVSGIRLHVKASSEGCQVSIICRRND*Y*ASAPSIRVTQVVGESLQPIR 63
Query: 548 RKFVLIPQNMIMGRTACSLN 607
KFVLIPQ+MIMGR ACSLN
Sbjct: 62 GKFVLIPQDMIMGRAACSLN 3
Score = 141 bits (303), Expect(2) = 6e-043
Identities = 65/82 (79%), Positives = 67/82 (81%)
Frame = +3 / -2
Query: 363 GPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNP 542
G RLVVAPLA DPLS+VSGSM* GGTIDTERVHLAYV*H+LLVRVCNP
Sbjct: 247 GARLVVAPLAIDPLSVVSGSM*KRARKAAR*A*YAGGTIDTERVHLAYV*HRLLVRVCNP 68
Query: 543 SAVNLFSSHRT**WAGRLVP*M 608
SAVNLFSSHRT**WAGRLVP*M
Sbjct: 67 SAVNLFSSHRT**WAGRLVP*M 2
Score = 75.8 bits (159), Expect(2) = 2e-066
Identities = 32/43 (74%), Positives = 33/43 (76%)
Frame = -2 / +1
Query: 364 PPPGARNTRAGAANVAVRPLPALKENVKRVMFYC*D*RCADAV 236
P G RAG NVAVRPLPALKENVKRVMFYC*D*RC A+
Sbjct: 244 PQEGHATHRAGVGNVAVRPLPALKENVKRVMFYC*D*RCEQAI 372
Score = 72.5 bits (152), Expect(2) = 1e-055
Identities = 32/44 (72%), Positives = 35/44 (79%)
Frame = +3 / -1
Query: 234 LTASAQRQS*Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGG 365
+ A +QRQS*Q*NMTRFTFSLRAGNGLTATF PAL + P G
Sbjct: 374 IIACSQRQS*Q*NMTRFTFSLRAGNGLTATFPTPALCVACPSWG 243
Score = 57.4 bits (119), Expect(3) = 2e-047
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +1 / -2
Query: 250 SVNLSSRT*RASRFP*GQVMASQQHLQHQP 339
SVNLS++T* ASRFP*G VMAS+QH QHQP
Sbjct: 358 SVNLSNKT*HASRFP*GPVMASRQHFQHQP 269
Score = 54.7 bits (113), Expect(2) = 6e-043
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +2 / -3
Query: 266 VEHDALHVFLEGR*WPHSNICSTSP 340
++HD LHVFLEGR*WPH NI +TSP
Sbjct: 342 IKHDTLHVFLEGR*WPHGNISNTSP 268
Score = 54.2 bits (112), Expect(2) = 4e-048
Identities = 25/36 (69%), Positives = 27/36 (75%)
Frame = -3 / +2
Query: 357 QGRATPGLVLQMLL*GHYLPSRKT*SASCSTAKIDA 250
+G GLVL+ML *GHY PSRKT*S SC AKIDA
Sbjct: 251 RGTQHTGLVLEMLP*GHYRPSRKT*SVSCFIAKIDA 358
Score = 53.3 bits (110), Expect(2) = 1e-047
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / +3
Query: 341 QGWCCKCCCEAITCPQGKREARHV 270
QGWC KCC EAIT PQGKREA HV
Sbjct: 267 QGWCWKCCREAITGPQGKREACHV 338
Score = 22.1 bits (42), Expect(3) = 2e-047
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / -3
Query: 222 DNCLLTAS 245
DNCLLTAS
Sbjct: 375 DNCLLTAS 352
>gb|BF177091.1|BF177091 EM1_3_E09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 619
Score = 232 bits (501), Expect(2) = 5e-065
Identities = 91/93 (97%), Positives = 92/93 (98%)
Frame = -2 / +3
Query: 658 KICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVS 479
KICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTAD LQTLTNNLCYTYARCTRSVS
Sbjct: 3 KICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVS 182
Query: 478 IVPPAYYAHLAAFRARFYMEPDTSDSGSVASGA 380
IVPPAYYAHLAAFRARFYMEPDTSDSGS+ASGA
Sbjct: 183 IVPPAYYAHLAAFRARFYMEPDTSDSGSMASGA 281
Score = 153 bits (329), Expect(2) = 2e-049
Identities = 71/92 (77%), Positives = 73/92 (79%)
Frame = +3 / -1
Query: 381 APLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLF 560
APLA DPLS VSGSM* GGTIDTERVHLAYV*H+L VRVC+ SAVNLF
Sbjct: 280 APLAIDPLSEVSGSM*KRARKAAR*A*YAGGTIDTERVHLAYV*HRLFVRVCSSSAVNLF 101
Query: 561 SSHRT**WAGRLVP*MPAWLHR*KSNSVGWQI 656
SSHRT * AGRLVP*MPAWLHR*KSNSVGWQI
Sbjct: 100 SSHRTW**AGRLVP*MPAWLHR*KSNSVGWQI 5
Score = 136 bits (291), Expect(2) = 2e-037
Identities = 56/89 (62%), Positives = 61/89 (68%)
Frame = +1 / -2
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPT 570
P C YLAPC++ELGRLPDEHSM +L S CT TC+T C E A HQ * CSHPT
Sbjct: 270 PLTHCQRYLAPCRSELGRLPDEHSMPGAQLTRSECT*RTCSTGCLSESAAHQL*TCSHPT 91
Query: 571 EHDNGQDGLFPECQHGCTGRNQTRLDGKS 657
H N Q GLFPEC+HG TGRNQ DGKS
Sbjct: 90 GHGNEQGGLFPECRHGYTGRNQIP*DGKS 4
Score = 128 bits (275), Expect(2) = 6e-032
Identities = 59/89 (66%), Positives = 67/89 (75%)
Frame = +2 / -3
Query: 392 HRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPISRKFVLIPQ 571
H V IWLHV+ SSEGCQMSIVCR ++*+ A AP +RV QVV +SLQ IS K VLIPQ
Sbjct: 269 H*PTVRGIWLHVEASSEGCQMSIVCRGHN*HGASAPSVRVAQVVCQSLQLISCKLVLIPQ 90
Query: 572 NMIMGRTACSLNASMAAQVEIKLGWMANL 658
+M+M R ACSLNA MA QVEIK MANL
Sbjct: 89 DMVMSRAACSLNAGMATQVEIKFRRMANL 3
Score = 128 bits (275), Expect(2) = 8e-031
Identities = 58/91 (63%), Positives = 69/91 (75%)
Frame = -1 / +2
Query: 659 KDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHVCQVHTLSI 480
+DLPS +*FLPV PC HSGNKP C L C VG*EQ+Y * A+S +Q VLHV VH+L +
Sbjct: 2 QDLPSYGI*FLPV*PCRHSGNKPPCSLPCPVG*EQVYS**AADSDKQPVLHVR*VHSLRV 181
Query: 479 NRSSCILCSSGSLPSSVLHGARYK*QRICGE 387
N + ILCSSGSLPSS+LHGARY *Q + G+
Sbjct: 182 NCAPGILCSSGSLPSSLLHGARYL*QWVNGQ 274
Score = 126 bits (270), Expect(2) = 2e-044
Identities = 57/89 (64%), Positives = 62/89 (69%)
Frame = -3 / +1
Query: 657 RFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTNLRLMGCKLSPTTCVTRMPGAHAQYQ 478
RFAI +LISTC AM AFREQA L I M CGMRT+L+LM C+L TTC TR GA A Q
Sbjct: 4 RFAILRNLISTCVAMPAFREQAALLITMSCGMRTSLQLMSCRL*QTTCATRTLGALAPCQ 183
Query: 477 SFLLHTMLIWQPSELGFTWSQIQVTADLW 391
HTMLIWQPSEL TWSQI +T W
Sbjct: 184 LCPRHTMLIWQPSELASTWSQIPLTVGQW 270
Score = 74.8 bits (157), Expect(2) = 2e-044
Identities = 32/49 (65%), Positives = 36/49 (73%)
Frame = -2 / +3
Query: 406 DSGSVASGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
D+ S A+ +RGPPPG GA +VAVRPLPALKENVKRVMFYC*
Sbjct: 246 DTSDSGSMASGARGPPPGGARGIRGAGSVAVRPLPALKENVKRVMFYC* 392
Score = 64.8 bits (135), Expect(2) = 2e-049
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +3 / -1
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLVVA 383
Q*NMTRFTFSLRAG GLTAT AP + PGGGPR +A
Sbjct: 388 Q*NMTRFTFSLRAGRGLTATLPAPLMPRAPPGGGPRAPLA 269
Score = 41.4 bits (84), Expect(2) = 2e-037
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = +2 / -3
Query: 266 VEHDALHVFLEGR*WPHSNICSTSPGVARPWWRAT 370
V+HD LHVFLE * P N S WWR T
Sbjct: 386 VKHDTLHVFLESG*GPDRNTPGPSDAACPTWWRPT 282
Score = 37.7 bits (76), Expect(2) = 5e-065
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -1 / +2
Query: 371 PWPSTRGAQHQGWCCKCCCEAITCPQGKREARHV 270
PW STR +CC +A T QGKREA HV
Sbjct: 281 PWASTRWGTRHQRGRECCGQAPTRSQGKREACHV 382
Score = 30.4 bits (60), Expect(2) = 6e-032
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1 / -2
Query: 253 VNLSSRT*RASRFP*GQVMASQQH 324
+ LSS+T* ASRFP* +V A QH
Sbjct: 399 MQLSSKT*HASRFP*ERVGA*PQH 328
Score = 26.7 bits (52), Expect(2) = 8e-031
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3 / +1
Query: 312 GHYLPSRKT*SASCSTAKI 256
G Y SRKT*S SC TA++
Sbjct: 340 GPYPLSRKT*SVSCFTAEL 396
>gb|CF487966.1|CF487966 POL1_47_A08.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_47_A08_A002 3', mRNA sequence
Length = 628
Score = 228 bits (493), Expect(2) = 5e-064
Identities = 88/124 (70%), Positives = 104/124 (83%)
Frame = -2 / +3
Query: 721 HNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTAD 542
H + D+SGNILPGTVVD+ ICHP+EFDFYLCSHAGI+GTSRP HYHVL+DEN+F+AD
Sbjct: 12 HGRRDLTDKSGNILPGTVVDTSICHPSEFDFYLCSHAGIKGTSRPTHYHVLYDENRFSAD 191
Query: 541 GLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGP 362
LQ LTNNLCYTYARCTR+VS+VPPAYYAHLAAFRAR+Y E +++D SV SG+ + G
Sbjct: 192 ALQFLTNNLCYTYARCTRAVSVVPPAYYAHLAAFRARYYDEQESTDGTSVVSGSAATAGG 371
Query: 361 PPGA 350
P A
Sbjct: 372 GPPA 383
Score = 38.2 bits (77), Expect(2) = 5e-064
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = -2 / +3
Query: 337 AGAANVAVRPLPALKENVKRVMFYC* 260
AG A R LP +KENVK VMF+C*
Sbjct: 363 AGGGPPAFRRLPQIKENVKEVMFFC* 440
>gb|CF488341.1|CF488341 POL1_49_G04.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_49_G04_A002 3', mRNA sequence
Length = 665
Score = 241 bits (520), Expect = 2e-062
Identities = 97/127 (76%), Positives = 106/127 (83%)
Frame = -2 / +2
Query: 640 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAY 461
EFDF+LCSHAGI+GTSRPAHYHVLWDEN FTAD LQTLTNNLCYTYARCTRSVSIVPPAY
Sbjct: 2 EFDFFLCSHAGIKGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAY 181
Query: 460 YAHLAAFRARFYMEPDTSDSGSVASGATTSRGPPPGARNTRAGAANVAVRPLPALKENVK 281
YAHLAAFRARFYMEPD+SDSGS+ASG+ + A + AVRPLP LK++VK
Sbjct: 182 YAHLAAFRARFYMEPDSSDSGSLASGSRGGAPSSSSTSRSTRAATSGAVRPLPVLKDSVK 361
Query: 280 RVMFYC* 260
VMFYC*
Sbjct: 362 NVMFYC* 382
Score = 125 bits (268), Expect(2) = 8e-031
Identities = 60/86 (69%), Positives = 65/86 (75%)
Frame = +3 / -3
Query: 384 PLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLFS 563
PLA+DPLS +SGSM*N GGT+DTERVHLA V* +LLVRVCN SAV LFS
Sbjct: 258 PLASDPLSELSGSM*NRARNAAR*A*YAGGTMDTERVHLA*V*QRLLVRVCNASAVKLFS 79
Query: 564 SHRT**WAGRLVP*MPAWLHR*KSNS 641
SH+T * AGRLVP MPAWLHR KSNS
Sbjct: 78 SHKTW**AGRLVPLMPAWLHRKKSNS 1
Score = 29.9 bits (59), Expect(2) = 8e-031
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +3 / -3
Query: 264 Q*NMTRFTFSLRAGNGLTATFAA 332
Q*NMT T SL G GLTA A
Sbjct: 378 Q*NMTFLTLSLSTGRGLTAPLVA 310
>gb|CW231166.1|CW231166 104_680_11210980_116_37342_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11210980, DNA
sequence
Length = 712
Score = 142 bits (305), Expect(3) = 2e-061
Identities = 53/59 (89%), Positives = 56/59 (94%)
Frame = -2 / +1
Query: 682 LPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYT 506
+ GTVVDSKICHPTEFDF+LCSHAGI+GTSRPAHYHVLWDEN FTAD LQTLTNNLCYT
Sbjct: 31 IAGTVVDSKICHPTEFDFFLCSHAGIKGTSRPAHYHVLWDENNFTADALQTLTNNLCYT 207
Score = 113 bits (242), Expect(4) = 2e-032
Identities = 50/59 (84%), Positives = 52/59 (88%)
Frame = +3 / -3
Query: 501 AYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVP 677
AYV* +LLVRVCN SAV LFSSH+T * AGRLVP MPAWLHR KSNSVGWQIFESTTVP
Sbjct: 212 AYV*QRLLVRVCNASAVKLFSSHKTW**AGRLVPLMPAWLHRKKSNSVGWQIFESTTVP 36
Score = 107 bits (228), Expect(3) = 2e-061
Identities = 45/72 (62%), Positives = 53/72 (73%)
Frame = -2 / +3
Query: 475 VPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGPPPGARNTRAGAANVAVRPLPAL 296
VPPAYYAHLAAFRARFYMEPD+SDSGS+ASG+ + A + AVRPLP L
Sbjct: 435 VPPAYYAHLAAFRARFYMEPDSSDSGSLASGSRGGAPSSSSTSRSTRAATSGAVRPLPVL 614
Query: 295 KENVKRVMFYC* 260
+++VK VMFYC*
Sbjct: 615 QDSVKNVMFYC* 650
Score = 32.7 bits (65), Expect(4) = 2e-032
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +3 / -1
Query: 384 PLATDPLSLVSGSM*NXXXXXXXXXXXXGGT 476
PLA+DPLS +SGSM*N GGT
Sbjct: 526 PLASDPLSELSGSM*NRARNAAR*A*YAGGT 434
Score = 27.6 bits (54), Expect(4) = 2e-032
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3 / -1
Query: 264 Q*NMTRFTFSLRAGNGLTATFAA 332
Q*NMT T S G GLTA A
Sbjct: 646 Q*NMTFLTLSXSTGRGLTAPLVA 578
Score = 27.2 bits (53), Expect(3) = 2e-061
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / +3
Query: 520 NLCYTYARCTRSVSI 476
N +YARCTRSVSI
Sbjct: 285 NCWCSYARCTRSVSI 329
Score = 22.1 bits (42), Expect(4) = 2e-032
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3 / -1
Query: 477 IDTERVHLA 503
+DTERVHLA
Sbjct: 328 MDTERVHLA 302
>gb|CW030108.1|CW030108 104_258_10500065_114_30403 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500065, DNA
sequence
Length = 840
Score = 83.1 bits (175), Expect(5) = 1e-058
Identities = 34/47 (72%), Positives = 36/47 (76%)
Frame = -2 / -1
Query: 814 KACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPG 674
KACASLE Y PPVTFVVVQKRHHTRLF H + D+SGNILPG
Sbjct: 489 KACASLEEGYLPPVTFVVVQKRHHTRLFPEVHGRRDMTDKSGNILPG 349
Score = 75.3 bits (158), Expect(5) = 1e-058
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = -2 / -2
Query: 604 QGTSRPAHYHVLWDENKFTADGLQTLTNNLCYT 506
QGTSRP HYHVL+DEN FTAD LQ+LTNNLCYT
Sbjct: 104 QGTSRPTHYHVLYDENHFTADALQSLTNNLCYT 6
Score = 63.8 bits (133), Expect(5) = 1e-058
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -2 / -1
Query: 676 GTVVDSKICHPTEFDFYLCSHAGIQ 602
GTVVD +ICHPTEFDFYLCSHAGIQ
Sbjct: 255 GTVVDQQICHPTEFDFYLCSHAGIQ 181
Score = 49.6 bits (102), Expect(4) = 5e-021
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +3 / +1
Query: 504 YV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP* 605
YV*H+LLV C+ SAV FSS RT *W GRLVP*
Sbjct: 4 YV*HRLLVSDCSASAVK*FSS*RTW*WVGRLVP* 105
Score = 47.3 bits (97), Expect(5) = 1e-058
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -2 / -1
Query: 880 YRDGVSEGQFYQVLLYELDAIRK 812
YRDGVSEGQF VLL+E+DAIRK
Sbjct: 645 YRDGVSEGQFSHVLLHEMDAIRK 577
Score = 46.0 bits (94), Expect(4) = 5e-021
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +3 / +2
Query: 603 *MPAWLHR*KSNSVGWQIFESTTVPGS 683
*+PA LH+*KSNSVGWQI STTVP +
Sbjct: 182 *IPA*LHK*KSNSVGWQICWSTTVPAA 262
Score = 34.5 bits (69), Expect(4) = 5e-021
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +3 / +2
Query: 813 FLMASSSYNRTW*NCPSLTPSL 878
FLMAS S TW N PSLTPSL
Sbjct: 578 FLMASIS*RSTWLN*PSLTPSL 643
Score = 33.6 bits (67), Expect(5) = 1e-058
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -2 / -1
Query: 934 LLISFWRATGQKPKRIIFYR 875
LLI+F R T ++P+RIIFYR
Sbjct: 783 LLIAFRRKTNRRPERIIFYR 724
Score = 32.2 bits (64), Expect(4) = 5e-021
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3 / +2
Query: 753 FWTTTKVTGGW*SDSNDAQA 812
FWTTT VTGG S +AQA
Sbjct: 428 FWTTTNVTGGRYPSSKEAQA 487
>gb|CL148074.1|CL148074 104_327_10592836_116_31781_344 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592836, DNA
sequence
Length = 711
Score = 82.6 bits (174), Expect(5) = 1e-058
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = -2 / +1
Query: 601 GTSRPAHYHVLWDENKFTADGLQTLTNNLCYT 506
GTSRPAHYHVLWDENKFTAD LQTLTNNLCYT
Sbjct: 316 GTSRPAHYHVLWDENKFTADELQTLTNNLCYT 411
Score = 71.6 bits (150), Expect(5) = 1e-058
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -2 / +3
Query: 475 VPPAYYAHLAAFRARFYMEPDTSDSGSVA 389
VPPAYYAHLAAFRARFYMEPDTSDSGS+A
Sbjct: 624 VPPAYYAHLAAFRARFYMEPDTSDSGSMA 710
Score = 67.5 bits (141), Expect(5) = 1e-058
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -2 / +2
Query: 676 GTVVDSKICHPTEFDFYLCSHAGIQ 602
GTVVDSKICHPTEFDFYLCSHAGIQ
Sbjct: 161 GTVVDSKICHPTEFDFYLCSHAGIQ 235
Score = 62.5 bits (130), Expect(3) = 5e-022
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = +3 / -1
Query: 543 SAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVP 677
S ++LF * + + *MPAWLHR*KSNSVGWQI ESTTVP
Sbjct: 294 SVISLFHRRMN*KGE*KKLT*MPAWLHR*KSNSVGWQILESTTVP 160
Score = 60.6 bits (126), Expect(5) = 4e-035
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3 / -2
Query: 504 YV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP* 605
YV*H+L VRVC+ SAVNLFSSHRT * AGRLVP*
Sbjct: 413 YV*HRLFVRVCSSSAVNLFSSHRTW**AGRLVP* 312
Score = 53.3 bits (110), Expect(5) = 1e-058
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -2 / +2
Query: 742 TRLFVNNHNDQRAADRSGNILPG 674
TRLF NNHNDQR DRSGNILPG
Sbjct: 2 TRLFANNHNDQRTVDRSGNILPG 70
Score = 50.6 bits (104), Expect(5) = 4e-035
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1 / -1
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSM 465
P C YLAPC++ELGRLPDEHSM
Sbjct: 708 PLTHCQRYLAPCRSELGRLPDEHSM 634
Score = 49.6 bits (102), Expect(4) = 6e-025
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -3 / +1
Query: 465 HTMLIWQPSELGFTWSQIQVTADLW 391
HTMLIWQPSEL TWSQI +T W
Sbjct: 634 HTMLIWQPSELASTWSQIPLTVGQW 708
Score = 49.2 bits (101), Expect(4) = 6e-025
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = -1 / +3
Query: 602 GNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHV 504
GNKP C L C VG*EQ+Y * A+S +Q VLHV
Sbjct: 315 GNKPPCSLPCPVG*EQVYS**AADSDKQPVLHV 413
Score = 47.8 bits (98), Expect(3) = 5e-022
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +2 / -2
Query: 392 HRSAVTCIWLHVKPSSEGCQMSIVCR 469
H V IWLHV+ SSEGCQMSIVCR
Sbjct: 707 H*PTVRGIWLHVEASSEGCQMSIVCR 630
Score = 44.6 bits (91), Expect(5) = 4e-035
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +1 / -2
Query: 577 DNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQC 675
+ G + PEC+HG TGRNQ DGKS + P+C
Sbjct: 260 EKGNEKN*PECRHGYTGRNQIP*DGKSWNQPRC 162
Score = 39.1 bits (79), Expect(5) = 4e-035
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +2 / -3
Query: 677 RQYVATSIGSTLIIVIINKQP 739
RQYV+TSI TL+IV+I+KQP
Sbjct: 67 RQYVSTSINCTLVIVVISKQP 5
Score = 39.1 bits (79), Expect(4) = 6e-025
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -1 / +1
Query: 674 HCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLS 576
H G +DLPS +*FLPV PC HSG S P S
Sbjct: 163 HRG*FQDLPSYGI*FLPV*PCRHSG*FFSFPFS 261
Score = 37.3 bits (75), Expect(3) = 5e-022
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1 / -2
Query: 661 SPPQCPAVCCHFYRQHADHCDY*QT 735
+P AVC HFY+ +A HC Y*QT
Sbjct: 83 APRTNQAVCFHFYQLYAGHCGY*QT 9
Score = 37.3 bits (75), Expect(4) = 6e-025
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = -3 / +3
Query: 738 GCLLIITMISVLPIEVATYCRALWW 664
GCLLI TM SV IEV TYC W
Sbjct: 6 GCLLITTMTSVQLIEVETYCLVSSW 80
Score = 28.1 bits (55), Expect(5) = 1e-058
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +2
Query: 505 YARCTRSVSIVPPA 464
YARCTRSVSI P+
Sbjct: 494 YARCTRSVSIGKPS 535
Score = 27.6 bits (54), Expect(5) = 4e-035
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -1
Query: 468 GGTIDTERVHLAYV 509
G IDTERVHLAY+
Sbjct: 531 GLPIDTERVHLAYL 490
>gb|CW157762.1|CW157762 104_561_11147696_148_36393_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11147696, DNA
sequence
Length = 711
Score = 82.6 bits (174), Expect(5) = 2e-057
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = -2 / +2
Query: 601 GTSRPAHYHVLWDENKFTADGLQTLTNNLCYT 506
GTSRPAHYHVLWDENKFTAD LQTLTNNLCYT
Sbjct: 173 GTSRPAHYHVLWDENKFTADELQTLTNNLCYT 268
Score = 78.0 bits (164), Expect(4) = 3e-030
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = -2 / +1
Query: 475 VPPAYYAHLAAFRARFYMEPDTSDSGSVASGA 380
VPPAYYAHLAAFRARFYMEPDTSDSGS+ASGA
Sbjct: 481 VPPAYYAHLAAFRARFYMEPDTSDSGSMASGA 576
Score = 71.2 bits (149), Expect(5) = 2e-057
Identities = 31/49 (63%), Positives = 35/49 (71%)
Frame = -2 / +1
Query: 406 DSGSVASGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
D+ S A+ +R PPPG GA +VAVRPLPALKENVKRVMFYC*
Sbjct: 541 DTSDSGSMASGAREPPPGGARGIRGAGSVAVRPLPALKENVKRVMFYC* 687
Score = 67.5 bits (141), Expect(5) = 2e-057
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -2 / +3
Query: 676 GTVVDSKICHPTEFDFYLCSHAGIQ 602
GTVVDSKICHPTEFDFYLCSHAGIQ
Sbjct: 18 GTVVDSKICHPTEFDFYLCSHAGIQ 92
Score = 62.5 bits (130), Expect(3) = 1e-022
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = +3 / -3
Query: 543 SAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVP 677
S ++LF * + + *MPAWLHR*KSNSVGWQI ESTTVP
Sbjct: 151 SVISLFHRRMN*KGE*KKLT*MPAWLHR*KSNSVGWQILESTTVP 17
Score = 61.1 bits (127), Expect(5) = 2e-041
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +3 / -2
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLVVA 383
Q*NMTRFTFSLRAG GLTAT AP + PGGG R +A
Sbjct: 683 Q*NMTRFTFSLRAGRGLTATLPAPLMPRAPPGGGSRAPLA 564
Score = 60.6 bits (126), Expect(5) = 2e-041
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3 / -1
Query: 504 YV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP* 605
YV*H+L VRVC+ SAVNLFSSHRT * AGRLVP*
Sbjct: 270 YV*HRLFVRVCSSSAVNLFSSHRTW**AGRLVP* 169
Score = 50.6 bits (104), Expect(5) = 2e-041
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1 / -3
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSM 465
P C YLAPC++ELGRLPDEHSM
Sbjct: 565 PLTHCQRYLAPCRSELGRLPDEHSM 491
Score = 49.6 bits (102), Expect(5) = 2e-057
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -3 / +2
Query: 465 HTMLIWQPSELGFTWSQIQVTADLW 391
HTMLIWQPSEL TWSQI +T W
Sbjct: 491 HTMLIWQPSELASTWSQIPLTVGQW 565
Score = 49.2 bits (101), Expect(4) = 3e-030
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = -1 / +1
Query: 602 GNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHV 504
GNKP C L C VG*EQ+Y * A+S +Q VLHV
Sbjct: 172 GNKPPCSLPCPVG*EQVYS**AADSDKQPVLHV 270
Score = 47.8 bits (98), Expect(3) = 1e-022
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +2 / -1
Query: 392 HRSAVTCIWLHVKPSSEGCQMSIVCR 469
H V IWLHV+ SSEGCQMSIVCR
Sbjct: 564 H*PTVRGIWLHVEASSEGCQMSIVCR 487
Score = 44.6 bits (91), Expect(5) = 2e-041
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +1 / -1
Query: 577 DNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQC 675
+ G + PEC+HG TGRNQ DGKS + P+C
Sbjct: 117 EKGNEKN*PECRHGYTGRNQIP*DGKSWNQPRC 19
Score = 39.6 bits (80), Expect(3) = 1e-022
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +2 / -1
Query: 266 VEHDALHVFLEGR*WPHSNICSTSPGVARPWWRAT 370
V+HD LHVF E * P N S WWR T
Sbjct: 681 VKHDTLHVFFESG*GPDRNTPGPSDAACPTWWRLT 577
Score = 39.1 bits (79), Expect(4) = 3e-030
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -1 / +2
Query: 674 HCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLS 576
H G +DLPS +*FLPV PC HSG S P S
Sbjct: 20 HRG*FQDLPSYGI*FLPV*PCRHSG*FFSFPFS 118
Score = 28.1 bits (55), Expect(5) = 2e-057
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +3
Query: 505 YARCTRSVSIVPPA 464
YARCTRSVSI P+
Sbjct: 351 YARCTRSVSIGKPS 392
Score = 27.6 bits (54), Expect(5) = 2e-041
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -3
Query: 468 GGTIDTERVHLAYV 509
G IDTERVHLAY+
Sbjct: 388 GLPIDTERVHLAYL 347
Score = 27.2 bits (53), Expect(4) = 3e-030
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -1 / +3
Query: 371 PWPSTRGAQHQGWCCKCCCEAITCPQGKREARHV 270
P STR +CC +A T Q KREA HV
Sbjct: 576 P*ASTRWGTRHQRGRECCGQAPTRSQRKREACHV 677
>gb|CW330844.1|CW330844 104_827_11480592_116_36010_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480592, DNA
sequence
Length = 739
Score = 82.6 bits (174), Expect(5) = 4e-054
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = -2 / +3
Query: 601 GTSRPAHYHVLWDENKFTADGLQTLTNNLCYT 506
GTSRPAHYHVLWDENKFTAD LQTLTNNLCYT
Sbjct: 213 GTSRPAHYHVLWDENKFTADELQTLTNNLCYT 308
Score = 78.0 bits (164), Expect(5) = 4e-054
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = -2 / +2
Query: 475 VPPAYYAHLAAFRARFYMEPDTSDSGSVASGA 380
VPPAYYAHLAAFRARFYMEPDTSDSGS+ASGA
Sbjct: 521 VPPAYYAHLAAFRARFYMEPDTSDSGSMASGA 616
Score = 67.5 bits (141), Expect(5) = 4e-054
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -2 / +1
Query: 676 GTVVDSKICHPTEFDFYLCSHAGIQ 602
GTVVDSKICHPTEFDFYLCSHAGIQ
Sbjct: 58 GTVVDSKICHPTEFDFYLCSHAGIQ 132
Score = 60.6 bits (126), Expect(5) = 4e-038
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3 / -1
Query: 504 YV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP* 605
YV*H+L VRVC+ SAVNLFSSHRT * AGRLVP*
Sbjct: 310 YV*HRLFVRVCSSSAVNLFSSHRTW**AGRLVP* 209
Score = 55.6 bits (115), Expect(4) = 3e-030
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = -2 / +2
Query: 406 DSGSVASGATTSRGPPPGARNTRAGAANVAVRPLPALKENV 284
D+ S A+ +RGPPPG GA +VAVRPLPALKENV
Sbjct: 581 DTSDSGSMASGARGPPPGGARGIRGAGSVAVRPLPALKENV 703
Score = 50.6 bits (104), Expect(5) = 4e-038
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1 / -3
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSM 465
P C YLAPC++ELGRLPDEHSM
Sbjct: 605 PLTHCQRYLAPCRSELGRLPDEHSM 531
Score = 49.6 bits (102), Expect(4) = 3e-030
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -3 / +3
Query: 465 HTMLIWQPSELGFTWSQIQVTADLW 391
HTMLIWQPSEL TWSQI +T W
Sbjct: 531 HTMLIWQPSELASTWSQIPLTVGQW 605
Score = 49.6 bits (102), Expect(5) = 4e-038
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = +3 / -2
Query: 285 TFSLRAGNGLTATFAAPALVLRAPGGGPRLVVA 383
TFSLRAG GLTAT AP + PGGGPR +A
Sbjct: 702 TFSLRAGRGLTATLPAPLMPRAPPGGGPRAPLA 604
Score = 49.2 bits (101), Expect(4) = 3e-030
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = -1 / +2
Query: 602 GNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHV 504
GNKP C L C VG*EQ+Y * A+S +Q VLHV
Sbjct: 212 GNKPPCSLPCPVG*EQVYS**AADSDKQPVLHV 310
Score = 44.6 bits (91), Expect(5) = 4e-038
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +1 / -1
Query: 577 DNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQC 675
+ G + PEC+HG TGRNQ DGKS + P+C
Sbjct: 157 EKGNEKN*PECRHGYTGRNQIP*DGKSWNQPRC 59
Score = 39.1 bits (79), Expect(4) = 3e-030
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -1 / +3
Query: 674 HCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLS 576
H G +DLPS +*FLPV PC HSG S P S
Sbjct: 60 HRG*FQDLPSYGI*FLPV*PCRHSG*FFSFPFS 158
Score = 31.8 bits (63), Expect(5) = 4e-054
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1 / +1
Query: 371 PWPSTRGAQHQGWCCKCCCEAITCPQGKRE 282
PW STR +CC +A T QGKRE
Sbjct: 616 PWASTRWGTRHQRGRECCGQAPTRSQGKRE 705
Score = 28.1 bits (55), Expect(5) = 4e-054
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +1
Query: 505 YARCTRSVSIVPPA 464
YARCTRSVSI P+
Sbjct: 391 YARCTRSVSIGKPS 432
Score = 27.6 bits (54), Expect(5) = 4e-038
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -3
Query: 468 GGTIDTERVHLAYV 509
G IDTERVHLAY+
Sbjct: 428 GLPIDTERVHLAYL 387
>gb|CW135737.1|CW135737 104_520_11118005_116_34836_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11118005, DNA
sequence
Length = 710
Score = 190 bits (409), Expect(3) = 1e-052
Identities = 76/123 (61%), Positives = 88/123 (71%)
Frame = -2 / -3
Query: 763 VVQKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPA 584
VVQKR HTRLF N N+ PGTVVD+ I HP EFDFYLCSH G +GTSRP
Sbjct: 600 VVQKRQHTRLFHREKNGGSTHYADQNVPPGTVVDTVITHPREFDFYLCSHWGTKGTSRPT 421
Query: 583 HYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSD 404
HY VLWDEN F +D +Q L +NLCYT+ARCT+ VS+VPPAYYAHLAA+R R Y+E S
Sbjct: 420 HYRVLWDENNFKSDEMQQLIHNLCYTFARCTKPVSLVPPAYYAHLAAYRGRLYLERSDST 241
Query: 403 SGS 395
+ S
Sbjct: 240 ATS 232
Score = 34.1 bits (68), Expect(3) = 1e-052
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2 / -3
Query: 352 ARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
+R T A + PLP L+++VK +MFYC*
Sbjct: 234 SRTTLYRATPLQTAPLPKLRDSVKGLMFYC* 142
Score = 22.6 bits (43), Expect(3) = 1e-052
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 847 QVLLYELDAIRKACA 803
QVL EL A+R AC+
Sbjct: 680 QVLTEELQAVRLACS 636
>gb|BI211673.1|BI211673 IP1_60_D12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 506
Score = 135 bits (289), Expect(3) = 6e-048
Identities = 54/60 (90%), Positives = 57/60 (95%)
Frame = -2 / +2
Query: 541 GLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGP 362
G + LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDT+DSGS+ASGATTSR P
Sbjct: 23 GCKLLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTTDSGSMASGATTSRAP 202
Score = 108 bits (231), Expect(4) = 4e-044
Identities = 43/62 (69%), Positives = 47/62 (75%)
Frame = +1 / -1
Query: 346 CAPLVEGHGLS*HRSPQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW 525
C + GHGLS*H SP C Y APC++ELGRLP EH+MQEERLILS CT HTCNT CW
Sbjct: 218 CCVPLLGHGLS*HHSP*THCQWYPAPCRSELGRLPGEHNMQEERLILSECT*HTCNTGCW 39
Query: 526 *E 531
*E
Sbjct: 38 *E 33
Score = 105 bits (224), Expect(2) = 5e-035
Identities = 44/56 (78%), Positives = 47/56 (83%)
Frame = -1 / +1
Query: 530 SHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGARYK*QRICGERCYDKPWP 363
SHQQ VLHVC VH+LSINRSSCILCS GSLPSS+LHGA Y *Q + GE CYDKP P
Sbjct: 34 SHQQPVLHVC*VHSLSINRSSCILCSPGSLPSSLLHGAGYH*QWVYGEWCYDKPCP 201
Score = 101 bits (216), Expect(3) = 9e-043
Identities = 42/54 (77%), Positives = 44/54 (81%)
Frame = -3 / +3
Query: 528 SPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLWRAVLRQAV 367
SPTTCVTRM GA AQYQSFLLH ML WQPSEL TWS+I +T LWR VLRQAV
Sbjct: 36 SPTTCVTRMLGALAQYQSFLLHIMLTWQPSELASTWSRIPLTVGLWRVVLRQAV 197
Score = 98.7 bits (209), Expect(2) = 5e-038
Identities = 42/54 (77%), Positives = 46/54 (85%)
Frame = +2 / -2
Query: 368 TACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGE 529
TACRST RHR V+ I LHV+ SSEGCQ+SI+CRRND*Y*A AP IRVTQVVGE
Sbjct: 196 TACRSTTRHRPTVSGIRLHVEASSEGCQVSIICRRND*Y*ASAPSIRVTQVVGE 35
Score = 88.6 bits (187), Expect(3) = 9e-043
Identities = 37/51 (72%), Positives = 40/51 (78%)
Frame = -2 / +2
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC*D*RCADAV 236
+ T+ P GARNTRAG NVAVRPLPALKENVKRVMFYC*D*RC A+
Sbjct: 173 ASGATTSRAPGGARNTRAGVGNVAVRPLPALKENVKRVMFYC*D*RCEQAI 325
Score = 84.5 bits (178), Expect(2) = 5e-030
Identities = 40/60 (66%), Positives = 42/60 (70%)
Frame = +3 / -3
Query: 363 GPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNP 542
G RLVVAPLA DPLS+VSGSM* GGTIDTERVHLAYV*H+LLVR P
Sbjct: 201 GARLVVAPLAIDPLSVVSGSM*KRARKAAR*A*YAGGTIDTERVHLAYV*HRLLVRSLQP 22
Score = 81.3 bits (171), Expect(2) = 5e-038
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = +3 / -3
Query: 234 LTASAQRQS*Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLV 377
+ A +QRQS*Q*NMTRFTFSLRAGNGLTATF PALVLRAP G +V
Sbjct: 327 IIACSQRQS*Q*NMTRFTFSLRAGNGLTATFPTPALVLRAPPGARLVV 184
Score = 77.6 bits (163), Expect(4) = 4e-044
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1 / -1
Query: 250 SVNLSSRT*RASRFP*GQVMASQQHLQHQPWCCAPLV 360
SVNLS+RT* ASRFP*G VMAS+QH QHQPWCC PL+
Sbjct: 311 SVNLSNRT*HASRFP*GPVMASRQHFQHQPWCCVPLL 201
Score = 68.4 bits (143), Expect(2) = 5e-030
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = +2 / -2
Query: 266 VEHDALHVFLEGR*WPHSNICSTSPGVARPWW 361
+EHD LHVFLEGR*WPH NI +TSPGVA P W
Sbjct: 295 IEHDTLHVFLEGR*WPHGNISNTSPGVACPSW 200
Score = 67.0 bits (140), Expect(3) = 6e-048
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = -3 / +3
Query: 357 QGRATPGLVLQMLL*GHYLPSRKT*SASCSTAKIDA 250
+G ATPGLVL+ML *GHY PSRKT*S SCS AKIDA
Sbjct: 204 EGHATPGLVLEMLP*GHYRPSRKT*SVSCSIAKIDA 311
Score = 64.3 bits (134), Expect(2) = 5e-035
Identities = 24/29 (82%), Positives = 24/29 (82%)
Frame = -1 / +1
Query: 356 RGAQHQGWCCKCCCEAITCPQGKREARHV 270
RG QHQGWC KCC EAIT PQGKREA HV
Sbjct: 205 RGTQHQGWCWKCCREAITGPQGKREACHV 291
Score = 29.0 bits (57), Expect(3) = 6e-048
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -2 / +1
Query: 562 ENKFTADGLQT 530
ENKFTADGLQT
Sbjct: 1 ENKFTADGLQT 33
Score = 27.6 bits (54), Expect(4) = 4e-044
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / -1
Query: 531 VCNPSAVNLF 560
VCNPSAVNLF
Sbjct: 32 VCNPSAVNLF 3
Score = 23.5 bits (45), Expect(3) = 9e-043
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / +2
Query: 561 RTNLRLMGCKL 529
RTNL MGCKL
Sbjct: 2 RTNLPRMGCKL 34
Score = 22.1 bits (42), Expect(4) = 4e-044
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / -2
Query: 222 DNCLLTAS 245
DNCLLTAS
Sbjct: 328 DNCLLTAS 305
>gb|CW089146.1|CW089146 104_434_10948530_115_32585_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948530, DNA
sequence
Length = 742
Score = 83.1 bits (175), Expect(4) = 3e-047
Identities = 34/47 (72%), Positives = 36/47 (76%)
Frame = -2 / +2
Query: 814 KACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPG 674
KACASLE Y PPVTFVVVQKRHHTRLF H + D+SGNILPG
Sbjct: 65 KACASLEEGYLPPVTFVVVQKRHHTRLFPEVHGRRDMTDKSGNILPG 205
Score = 75.3 bits (158), Expect(4) = 3e-047
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = -2 / +3
Query: 604 QGTSRPAHYHVLWDENKFTADGLQTLTNNLCYT 506
QGTSRP HYHVL+DEN FTAD LQ+LTNNLCYT
Sbjct: 450 QGTSRPTHYHVLYDENHFTADALQSLTNNLCYT 548
Score = 63.8 bits (133), Expect(4) = 3e-047
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -2 / +2
Query: 676 GTVVDSKICHPTEFDFYLCSHAGIQ 602
GTVVD +ICHPTEFDFYLCSHAGIQ
Sbjct: 299 GTVVDQQICHPTEFDFYLCSHAGIQ 373
Score = 24.9 bits (48), Expect(4) = 3e-047
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = -2 / +3
Query: 508 TYARCTRSVSI 476
+YARCTR+VS+
Sbjct: 639 SYARCTRAVSV 671
>gb|CW182991.1|CW182991 104_598_11164376_116_36666_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164376, DNA
sequence
Length = 633
Score = 78.5 bits (165), Expect(4) = 2e-046
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = -2 / +1
Query: 601 GTSRPAHYHVLWDENKFTADGLQTLTNNLCYT 506
GTSRPAHYHVLWDEN F+AD LQTLTNNLCYT
Sbjct: 214 GTSRPAHYHVLWDENNFSADELQTLTNNLCYT 309
Score = 71.2 bits (149), Expect(4) = 2e-046
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = -2 / +3
Query: 475 VPPAYYAHLAAFRARFYMEPDTSDSGSVAS 386
VPPAYYAHLAAFRARFYM+P+TSDSGSVAS
Sbjct: 510 VPPAYYAHLAAFRARFYMKPETSDSGSVAS 599
Score = 68.0 bits (142), Expect(4) = 2e-046
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -2 / +1
Query: 685 ILPGTVVDSKICHPTEFDFYLCSHAGIQ 602
+L GTVVDSKICHPTEFDFYLCSHAGI+
Sbjct: 37 LLKGTVVDSKICHPTEFDFYLCSHAGIK 120
Score = 54.2 bits (112), Expect(4) = 6e-025
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +3 / -2
Query: 606 MPAWLHR*KSNSVGWQIFESTTVP 677
MPAWLH+*KSNSVG QIFESTTVP
Sbjct: 116 MPAWLHK*KSNSVG*QIFESTTVP 45
Score = 54.2 bits (112), Expect(4) = 6e-025
Identities = 25/33 (75%), Positives = 27/33 (81%)
Frame = +3 / -2
Query: 504 YV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP 602
YV* +L VRVCN SA LFSSH+T** AGRLVP
Sbjct: 311 YV*QRLFVRVCNSSAEKLFSSHKT***AGRLVP 213
Score = 38.6 bits (78), Expect(4) = 6e-025
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2 / -2
Query: 392 HRSAVTCIWLHVKPSSEGCQMSIV 463
HRS V +W HVK S EG Q+SI+
Sbjct: 593 HRSTVRSLWFHVKTSPEGSQVSII 522
Score = 26.7 bits (52), Expect(4) = 2e-046
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -2 / +2
Query: 508 TYARCTRSVSI 476
+YARCTRSVSI
Sbjct: 377 SYARCTRSVSI 409
Score = 23.5 bits (45), Expect(4) = 6e-025
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -1
Query: 477 IDTERVHLA 503
IDTERVHLA
Sbjct: 408 IDTERVHLA 382
>gb|CN134509.1|CN134509 OX1_26_F12.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_F12_A002 5', mRNA sequence
Length = 723
Score = 131 bits (280), Expect(2) = 1e-045
Identities = 51/105 (48%), Positives = 70/105 (66%)
Frame = -2 / +3
Query: 727 NNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 548
N+H ++ N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 402 NHHTKFFIPGKTENVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 581
Query: 547 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPD 413
D LQ L ++L Y Y R T ++S+V P YAHLAA + +++ D
Sbjct: 582 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFD 716
Score = 74.4 bits (156), Expect(2) = 1e-045
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = -2 / +3
Query: 904 QKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQKRHHTRLFV 728
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F+
Sbjct: 249 KKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFI 425
>gb|CW163008.1|CW163008 104_570_11151237_116_36445_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151237, DNA
sequence
Length = 715
Score = 78.5 bits (165), Expect(5) = 3e-045
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = -2 / +1
Query: 601 GTSRPAHYHVLWDENKFTADGLQTLTNNLCYT 506
GTSRPAHYHVLWDEN F+AD LQTLTNNLCYT
Sbjct: 121 GTSRPAHYHVLWDENNFSADELQTLTNNLCYT 216
Score = 75.8 bits (159), Expect(5) = 3e-045
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = -2 / +3
Query: 475 VPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
VPPAYYAHLAAFRARFYMEP+TSDSGSVASG
Sbjct: 417 VPPAYYAHLAAFRARFYMEPETSDSGSVASG 509
Score = 54.2 bits (112), Expect(6) = 1e-021
Identities = 25/33 (75%), Positives = 27/33 (81%)
Frame = +3 / -3
Query: 504 YV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP 602
YV* +L VRVCN SA LFSSH+T** AGRLVP
Sbjct: 218 YV*QRLFVRVCNSSAEKLFSSHKT***AGRLVP 120
Score = 51.9 bits (107), Expect(5) = 3e-045
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = -2 / +3
Query: 361 PPGARNTRAGAANVAVRPLPALKENVKRVMFYC*D*RCADAVSKQLSLW 215
P A ++ AVRPLPALK+NVKRVMFYC* * A V ++++
Sbjct: 525 PQSASHSTRAPGGAAVRPLPALKDNVKRVMFYC*G*AGALMVPSLVNMF 671
Score = 39.6 bits (80), Expect(6) = 1e-021
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2 / -3
Query: 383 TARHRSAVTCIWLHVKPSSEGCQMSIV 463
T HRS V +W HVK S EG Q+SI+
Sbjct: 509 TTCHRSTVRSLWFHVKTSPEGSQVSII 429
Score = 35.4 bits (71), Expect(6) = 1e-021
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = +3 / -1
Query: 237 TASAQRQS*Q*NMTRFTFSLRAGNGLTA 320
T SA Q*NMT FT S RAG+GLTA
Sbjct: 649 TISAPA*PQQ*NMTLFTLSFRAGSGLTA 566
Score = 26.7 bits (52), Expect(5) = 3e-045
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -2 / +2
Query: 508 TYARCTRSVSI 476
+YARCTRSVSI
Sbjct: 284 SYARCTRSVSI 316
Score = 24.4 bits (47), Expect(5) = 3e-045
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / +1
Query: 628 YLCSHAGIQ 602
YLCSHAGI+
Sbjct: 1 YLCSHAGIK 27
Score = 23.5 bits (45), Expect(6) = 1e-021
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -2
Query: 477 IDTERVHLA 503
IDTERVHLA
Sbjct: 315 IDTERVHLA 289
Score = 21.7 bits (41), Expect(6) = 1e-021
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +3 / -3
Query: 606 MPAWLHR 626
MPAWLH+
Sbjct: 23 MPAWLHK 3
Score = 21.7 bits (41), Expect(6) = 1e-021
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1 / -2
Query: 337 PWCCAPLVEGHGLS*HRSP 393
P C L E HGL H P
Sbjct: 552 PECYGMLTEVHGLQDHLPP 496
>gb|CW194330.1|CW194330 104_617_11180039_148_36789_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180039, DNA
sequence
Length = 712
Score = 136 bits (292), Expect(3) = 3e-044
Identities = 51/93 (54%), Positives = 67/93 (72%)
Frame = -2 / +1
Query: 697 RSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNN 518
++GN+ PGTVVD+ + P+ +DFYLCSH G+ GTSRP HY+ L DE+ F +D LQ L N
Sbjct: 280 KTGNVPPGTVVDTGVVDPSAYDFYLCSHTGLLGTSRPTHYYSLVDEHGFGSDDLQKLIYN 459
Query: 517 LCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 419
LC+ +ARCT+ VS+ P YYA L A+R R Y E
Sbjct: 460 LCFVFARCTKPVSLATPVYYADLVAYRGRVYYE 558
Score = 43.7 bits (89), Expect(3) = 3e-044
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -2 / +1
Query: 901 KPKRIIFYRDGVSEGQFYQVLLYELDAIRKA 809
KP++II++RDGVS+GQF VL EL + KA
Sbjct: 88 KPQKIIYFRDGVSDGQFDMVLNEELADLEKA 180
Score = 38.6 bits (78), Expect(3) = 3e-044
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2 / +1
Query: 787 YQPPVTFVVVQKRHHTRLFVNNHNDQR 707
Y P +T +V +KRHHTRLF + Q+
Sbjct: 196 YAPTITVIVAKKRHHTRLFPKDQGQQQ 276
>gb|CW482935.1|CW482935 fsbb001f244e18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f244e18, DNA
sequence
Length = 758
Score = 82.6 bits (174), Expect(4) = 8e-044
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = -2 / +2
Query: 601 GTSRPAHYHVLWDENKFTADGLQTLTNNLCYT 506
GTSRPAHYHVLWDENKFTAD LQTLTNNLCYT
Sbjct: 8 GTSRPAHYHVLWDENKFTADELQTLTNNLCYT 103
Score = 78.0 bits (164), Expect(3) = 3e-028
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = -2 / +1
Query: 475 VPPAYYAHLAAFRARFYMEPDTSDSGSVASGA 380
VPPAYYAHLAAFRARFYMEPDTSDSGS+ASGA
Sbjct: 316 VPPAYYAHLAAFRARFYMEPDTSDSGSMASGA 411
Score = 74.8 bits (157), Expect(4) = 8e-044
Identities = 32/49 (65%), Positives = 36/49 (73%)
Frame = -2 / +1
Query: 406 DSGSVASGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
D+ S A+ +RGPPPG GA +VAVRPLPALKENVKRVMFYC*
Sbjct: 376 DTSDSGSMASGARGPPPGGARGIRGAGSVAVRPLPALKENVKRVMFYC* 522
Score = 64.8 bits (135), Expect(4) = 2e-034
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +3 / -1
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLVVA 383
Q*NMTRFTFSLRAG GLTAT AP + PGGGPR +A
Sbjct: 518 Q*NMTRFTFSLRAGRGLTATLPAPLMPRAPPGGGPRAPLA 399
Score = 60.6 bits (126), Expect(4) = 2e-034
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3 / -3
Query: 504 YV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP* 605
YV*H+L VRVC+ SAVNLFSSHRT * AGRLVP*
Sbjct: 105 YV*HRLFVRVCSSSAVNLFSSHRTW**AGRLVP* 4
Score = 53.3 bits (110), Expect(3) = 3e-028
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = -3 / +3
Query: 603 REQAVLPIIMFCGMRTNLRLMGCKLSPTTCVTR 505
REQA L I M CGMRT+L+LM C+L TTC TR
Sbjct: 6 REQAALLITMSCGMRTSLQLMSCRL*QTTCATR 104
Score = 50.6 bits (104), Expect(4) = 2e-034
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1 / -2
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSM 465
P C YLAPC++ELGRLPDEHSM
Sbjct: 400 PLTHCQRYLAPCRSELGRLPDEHSM 326
Score = 49.6 bits (102), Expect(4) = 8e-044
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -3 / +2
Query: 465 HTMLIWQPSELGFTWSQIQVTADLW 391
HTMLIWQPSEL TWSQI +T W
Sbjct: 326 HTMLIWQPSELASTWSQIPLTVGQW 400
Score = 37.7 bits (76), Expect(3) = 3e-028
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -1 / +3
Query: 371 PWPSTRGAQHQGWCCKCCCEAITCPQGKREARHV 270
PW STR +CC +A T QGKREA HV
Sbjct: 411 PWASTRWGTRHQRGRECCGQAPTRSQGKREACHV 512
Score = 28.1 bits (55), Expect(4) = 8e-044
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +3
Query: 505 YARCTRSVSIVPPA 464
YARCTRSVSI P+
Sbjct: 186 YARCTRSVSIGKPS 227
Score = 27.6 bits (54), Expect(4) = 2e-034
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -2
Query: 468 GGTIDTERVHLAYV 509
G IDTERVHLAY+
Sbjct: 223 GLPIDTERVHLAYL 182
>gb|CW301269.1|CW301269 104_785_11464112_148_36268_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464112, DNA
sequence
Length = 603
Score = 78.5 bits (165), Expect(4) = 4e-043
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = -2 / +3
Query: 601 GTSRPAHYHVLWDENKFTADGLQTLTNNLCYT 506
GTSRPAHYHVLWDEN F+AD LQTLTNNLCYT
Sbjct: 9 GTSRPAHYHVLWDENNFSADELQTLTNNLCYT 104
Score = 75.8 bits (159), Expect(4) = 4e-043
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = -2 / +2
Query: 475 VPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
VPPAYYAHLAAFRARFYMEP+TSDSGSVASG
Sbjct: 305 VPPAYYAHLAAFRARFYMEPETSDSGSVASG 397
Score = 51.9 bits (107), Expect(4) = 4e-043
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = -2 / +2
Query: 361 PPGARNTRAGAANVAVRPLPALKENVKRVMFYC*D*RCADAVSKQLSLW 215
P A ++ AVRPLPALK+NVKRVMFYC* * A V ++++
Sbjct: 413 PQSASHSTRAPGGAAVRPLPALKDNVKRVMFYC*G*AGALMVPSLVNMF 559
Score = 26.7 bits (52), Expect(4) = 4e-043
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -2 / +1
Query: 508 TYARCTRSVSI 476
+YARCTRSVSI
Sbjct: 172 SYARCTRSVSI 204
>gb|DN551908.1|DN551908 pSPR-RT-MR-H2_E02_C027 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 871
Score = 140 bits (300), Expect(2) = 2e-042
Identities = 57/124 (45%), Positives = 77/124 (62%)
Frame = -2 / -1
Query: 727 NNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 548
N+H ++ N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 757 NHHTKFFIPGKTENVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 578
Query: 547 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSR 368
D LQ L ++L Y Y R T ++S+V P YAHLAA + +++ D S + G TS
Sbjct: 577 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMSETSSSHGGHTSA 398
Query: 367 GPPP 356
G P
Sbjct: 397 GSVP 386
Score = 54.2 bits (112), Expect(2) = 2e-042
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = -2 / -1
Query: 865 SEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQKRHHTRLFV 728
SE QF QVL EL I +AC L+ + P T ++ QK HHT+ F+
Sbjct: 871 SESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFI 734
>gb|CF485254.1|CF485254 POL1_30_H08.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_30_H08_A002 3', mRNA sequence
Length = 573
Score = 156 bits (335), Expect(2) = 9e-042
Identities = 62/87 (71%), Positives = 69/87 (79%)
Frame = -2 / +1
Query: 646 PTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPP 467
PTEFDF+LCSHAGI+GTSRP HYHVL D+NKFTA LQ+LT NLCY Y+ CTRSVSI PP
Sbjct: 1 PTEFDFFLCSHAGIKGTSRPTHYHVLRDDNKFTAGALQSLTYNLCYLYSSCTRSVSIAPP 180
Query: 466 AYYAHLAAFRARFYMEPDTSDSGSVAS 386
AYYAH AFRARFY+ + SV S
Sbjct: 181 AYYAHKLAFRARFYINQGYDTATSVGS 261
Score = 35.9 bits (72), Expect(2) = 9e-042
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -2 / +1
Query: 328 ANVAVRPLPALKENVKRVMFYC*D*RCADAVSKQLSL 218
A ++PLP +K +KR+MFYC* + ++K L L
Sbjct: 289 AGPGLKPLPEIKGELKRLMFYC*SVTTENLLNKALLL 399
>gb|BZ346558.1|BZ346558 hv20d11.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hv20d11 5', DNA sequence
Length = 714
Score = 96.4 bits (204), Expect(4) = 2e-041
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = -2 / -1
Query: 811 ACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPGTV 668
ACASLE++YQP VTFVVVQKRHHTRLF +NHNDQ + RSGNILPG +
Sbjct: 177 ACASLEAEYQPKVTFVVVQKRHHTRLFAHNHNDQNSIARSGNILPGNI 34
Score = 51.9 bits (107), Expect(4) = 2e-041
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = -2 / -2
Query: 886 IFYRDGVSEGQFYQVLLYELDAIRK 812
+ RDGVSEGQFYQVLLYEL+AIRK
Sbjct: 326 LLVRDGVSEGQFYQVLLYELNAIRK 252
Score = 40.0 bits (81), Expect(4) = 2e-041
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -1 / -2
Query: 977 DPQRGTVSGGMIREPSHFF 921
DPQRGTVSGGMIR +H+F
Sbjct: 620 DPQRGTVSGGMIRCTAHYF 564
Score = 38.6 bits (78), Expect(4) = 2e-041
Identities = 14/20 (70%), Positives = 19/20 (95%)
Frame = -2 / -2
Query: 934 LLISFWRATGQKPKRIIFYR 875
LL+SF ++TG+KP+RIIFYR
Sbjct: 452 LLVSFKKSTGEKPQRIIFYR 393
>gb|BF656550.1|BF656550 FM1_51_D09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 548
Score = 153 bits (328), Expect(2) = 3e-040
Identities = 57/85 (67%), Positives = 67/85 (78%)
Frame = -2 / +2
Query: 649 HPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVP 470
HP EFDFYLCSH G +GTSRP HY VLWDEN F +D +Q L +NLCYT+ARCT+ VS+VP
Sbjct: 5 HPREFDFYLCSHWGTKGTSRPTHYRVLWDENNFKSDEMQQLIHNLCYTFARCTKPVSLVP 184
Query: 469 PAYYAHLAAFRARFYMEPDTSDSGS 395
PAYYAHLAA+R R Y+E S + S
Sbjct: 185 PAYYAHLAAYRGRLYLERSDSTATS 259
Score = 34.1 bits (68), Expect(2) = 3e-040
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2 / +2
Query: 352 ARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
+R T A + PLP L+++VK +MFYC*
Sbjct: 257 SRTTLYRATPLQTAPLPKLRDSVKGLMFYC* 349
>gb|CW356188.1|CW356188 fsbb001f021c08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f021c08, DNA
sequence
Length = 601
Score = 136 bits (292), Expect(3) = 6e-040
Identities = 51/93 (54%), Positives = 67/93 (72%)
Frame = -2 / -2
Query: 697 RSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNN 518
++GN+ PGTVVD+ + P+ +DFYLCSH G+ GTSRP HY+ L DE+ F +D LQ L N
Sbjct: 411 KTGNVPPGTVVDTGVVDPSAYDFYLCSHTGLLGTSRPTHYYSLVDEHGFGSDDLQKLIYN 232
Query: 517 LCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 419
LC+ +ARCT+ VS+ P YYA L A+R R Y E
Sbjct: 231 LCFVFARCTKPVSLATPVYYADLVAYRGRVYYE 133
Score = 38.6 bits (78), Expect(3) = 6e-040
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2 / -2
Query: 787 YQPPVTFVVVQKRHHTRLFVNNHNDQR 707
Y P +T +V +KRHHTRLF + Q+
Sbjct: 495 YAPTITVIVAKKRHHTRLFPKDQGQQQ 415
Score = 29.0 bits (57), Expect(3) = 6e-040
Identities = 9/14 (64%), Positives = 14/14 (100%)
Frame = -2 / -1
Query: 898 PKRIIFYRDGVSEG 857
P++II++RDGVS+G
Sbjct: 601 PQKIIYFRDGVSDG 560
>gb|CW396612.1|CW396612 fsbb001f085c03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f085c03, DNA
sequence
Length = 752
Score = 78.0 bits (164), Expect(3) = 1e-025
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = -2 / +2
Query: 475 VPPAYYAHLAAFRARFYMEPDTSDSGSVASGA 380
VPPAYYAHLAAFRARFYMEPDTSDSGS+ASGA
Sbjct: 293 VPPAYYAHLAAFRARFYMEPDTSDSGSMASGA 388
Score = 74.8 bits (157), Expect(4) = 1e-039
Identities = 32/49 (65%), Positives = 36/49 (73%)
Frame = -2 / +2
Query: 406 DSGSVASGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
D+ S A+ +RGPPPG GA +VAVRPLPALKENVKRVMFYC*
Sbjct: 353 DTSDSGSMASGARGPPPGGARGIRGAGSVAVRPLPALKENVKRVMFYC* 499
Score = 68.4 bits (143), Expect(4) = 1e-039
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -2 / +3
Query: 583 HYHVLWDENKFTADGLQTLTNNLCYT 506
HYHVLWDENKFTAD LQTLTNNLCYT
Sbjct: 3 HYHVLWDENKFTADELQTLTNNLCYT 80
Score = 64.8 bits (135), Expect(4) = 2e-031
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +3 / -3
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLVVA 383
Q*NMTRFTFSLRAG GLTAT AP + PGGGPR +A
Sbjct: 495 Q*NMTRFTFSLRAGRGLTATLPAPLMPRAPPGGGPRAPLA 376
Score = 50.6 bits (104), Expect(4) = 2e-031
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1 / -1
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSM 465
P C YLAPC++ELGRLPDEHSM
Sbjct: 377 PLTHCQRYLAPCRSELGRLPDEHSM 303
Score = 49.6 bits (102), Expect(4) = 2e-031
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3 / -2
Query: 504 YV*HKLLVRVCNPSAVNLFSSHRT 575
YV*H+L VRVC+ SAVNLFSSHRT
Sbjct: 82 YV*HRLFVRVCSSSAVNLFSSHRT 11
Score = 49.6 bits (102), Expect(4) = 1e-039
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -3 / +3
Query: 465 HTMLIWQPSELGFTWSQIQVTADLW 391
HTMLIWQPSEL TWSQI +T W
Sbjct: 303 HTMLIWQPSELASTWSQIPLTVGQW 377
Score = 44.1 bits (90), Expect(3) = 1e-025
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -3 / +1
Query: 582 IIMFCGMRTNLRLMGCKLSPTTCVTR 505
I M CGMRT+L+LM C+L TTC TR
Sbjct: 4 ITMSCGMRTSLQLMSCRL*QTTCATR 81
Score = 37.7 bits (76), Expect(3) = 1e-025
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -1 / +1
Query: 371 PWPSTRGAQHQGWCCKCCCEAITCPQGKREARHV 270
PW STR +CC +A T QGKREA HV
Sbjct: 388 PWASTRWGTRHQRGRECCGQAPTRSQGKREACHV 489
Score = 28.1 bits (55), Expect(4) = 1e-039
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +1
Query: 505 YARCTRSVSIVPPA 464
YARCTRSVSI P+
Sbjct: 163 YARCTRSVSIGKPS 204
Score = 27.6 bits (54), Expect(4) = 2e-031
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -1
Query: 468 GGTIDTERVHLAYV 509
G IDTERVHLAY+
Sbjct: 200 GLPIDTERVHLAYL 159
>gb|CW178747.1|CW178747 104_592_11159733_116_36617_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11159733, DNA
sequence
Length = 692
Score = 84.5 bits (178), Expect(3) = 3e-038
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = -2 / +2
Query: 811 ACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPGTVV 665
ACASL+ YQP VTFVVVQKRHHTRLF NH + DRSGNILPG V
Sbjct: 209 ACASLQEGYQPRVTFVVVQKRHHTRLFPENHRARDQTDRSGNILPGMQV 355
Score = 65.7 bits (137), Expect(3) = 3e-038
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = -2 / +1
Query: 685 ILPGTVVDSKICHPTEFDFYLCSHAGIQ 602
+L GTVVD+KICHP+EFDFYLCSH+GIQ
Sbjct: 448 VLSGTVVDTKICHPSEFDFYLCSHSGIQ 531
Score = 48.7 bits (100), Expect(3) = 3e-038
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = -2 / +2
Query: 883 FYRDGVSEGQFYQVLLYELDAIRKACASL 797
F DGVSEGQF QVLLYE+DAIRK + L
Sbjct: 47 FCSDGVSEGQFSQVLLYEMDAIRKVFSCL 133
>gb|CW190349.1|CW190349 104_612_11174456_116_36836_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11174456, DNA
sequence
Length = 643
Score = 136 bits (292), Expect(2) = 1e-036
Identities = 51/93 (54%), Positives = 67/93 (72%)
Frame = -2 / +3
Query: 697 RSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNN 518
++GN+ PGTVVD+ + P+ +DFYLCSH G+ GTSRP HY+ L DE+ F +D LQ L N
Sbjct: 132 KTGNVPPGTVVDTGVVDPSAYDFYLCSHTGLLGTSRPTHYYSLVDEHGFGSDDLQKLIYN 311
Query: 517 LCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 419
LC+ +ARCT+ VS+ P YYA L A+R R Y E
Sbjct: 312 LCFVFARCTKPVSLATPVYYADLVAYRGRVYYE 410
Score = 38.6 bits (78), Expect(2) = 1e-036
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2 / +3
Query: 787 YQPPVTFVVVQKRHHTRLFVNNHNDQR 707
Y P +T +V +KRHHTRLF + Q+
Sbjct: 48 YAPTITVIVAKKRHHTRLFPKDQGQQQ 128
>gb|CW450000.1|CW450000 fsbb001f188g17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f188g17, DNA
sequence
Length = 805
Score = 98.2 bits (208), Expect(3) = 2e-036
Identities = 37/46 (80%), Positives = 42/46 (91%)
Frame = -2 / -3
Query: 811 ACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPG 674
ACASLE++YQP VTF+VVQKRHHTRLF +NHNDQ + DRSGNILPG
Sbjct: 194 ACASLEANYQPQVTFIVVQKRHHTRLFAHNHNDQNSVDRSGNILPG 57
Score = 53.8 bits (111), Expect(3) = 2e-036
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = -2 / -2
Query: 889 IIFYRDGVSEGQFYQVLLYELDAIRK 812
+ F RDGVSEGQFYQVLL+ELDAIRK
Sbjct: 360 VTFDRDGVSEGQFYQVLLHELDAIRK 283
Score = 40.9 bits (83), Expect(3) = 2e-036
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = -2 / -3
Query: 934 LLISFWRATGQKPKRIIFYR 875
LLISF R+TGQKP+RI+FYR
Sbjct: 503 LLISFKRSTGQKPQRILFYR 444
>gb|CW140184.1|CW140184 104_530_11135648_116_34915_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135648, DNA
sequence
Length = 652
Score = 98.2 bits (208), Expect(3) = 2e-036
Identities = 37/46 (80%), Positives = 42/46 (91%)
Frame = -2 / -1
Query: 811 ACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPG 674
ACASLE++YQP VTF+VVQKRHHTRLF +NHNDQ + DRSGNILPG
Sbjct: 154 ACASLEANYQPQVTFIVVQKRHHTRLFAHNHNDQNSVDRSGNILPG 17
Score = 53.8 bits (111), Expect(3) = 2e-036
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = -2 / -3
Query: 889 IIFYRDGVSEGQFYQVLLYELDAIRK 812
+ F RDGVSEGQFYQVLL+ELDAIRK
Sbjct: 320 VTFDRDGVSEGQFYQVLLHELDAIRK 243
Score = 40.9 bits (83), Expect(3) = 2e-036
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = -2 / -1
Query: 934 LLISFWRATGQKPKRIIFYR 875
LLISF R+TGQKP+RI+FYR
Sbjct: 463 LLISFKRSTGQKPQRILFYR 404
>gb|CF482007.1|CF482007 POL1_76_B05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_76_B05_A002 3', mRNA sequence
Length = 683
Score = 139 bits (299), Expect(2) = 7e-036
Identities = 57/124 (45%), Positives = 76/124 (61%)
Frame = -2 / +3
Query: 727 NNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 548
N+H ++ N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 57 NHHTKFFIPGKTENVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 236
Query: 547 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSR 368
D LQ L ++L Y Y R T ++S+V P YAHLAA + ++ D S + G TS
Sbjct: 237 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFINFDEMSETSSSHGGHTSA 416
Query: 367 GPPP 356
G P
Sbjct: 417 GSVP 428
Score = 32.7 bits (65), Expect(2) = 7e-036
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2 / +3
Query: 799 LESDYQPPVTFVVVQKRHHTRLFV 728
L+ + P T ++ QK HHT+ F+
Sbjct: 9 LDEKWNPKFTLIIAQKNHHTKFFI 80
>gb|CW484158.1|CW484158 fsbb001f246c16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f246c16, DNA
sequence
Length = 402
Score = 133 bits (285), Expect(2) = 1e-035
Identities = 50/91 (54%), Positives = 65/91 (71%)
Frame = -2 / +1
Query: 697 RSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNN 518
++GN+ PGTVVD+ + P+ +DFYLCSH G+ GTSRP HY+ L DE+ F +D LQ L N
Sbjct: 130 KTGNVPPGTVVDTGVADPSAYDFYLCSHTGLLGTSRPTHYYSLVDEHGFGSDDLQKLIYN 309
Query: 517 LCYTYARCTRSVSIVPPAYYAHLAAFRARFY 425
LC+ +ARCT+ VS+ P YYA L A R R Y
Sbjct: 310 LCFVFARCTKPVSLATPVYYADLVAHRGRVY 402
Score = 38.6 bits (78), Expect(2) = 1e-035
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2 / +1
Query: 787 YQPPVTFVVVQKRHHTRLFVNNHNDQR 707
Y P +T +V +KRHHTRLF + Q+
Sbjct: 46 YAPTITVIVAKKRHHTRLFPKDQGQQQ 126
>gb|BE595671.1|BE595671 PI1_55_B08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 232
Score = 118 bits (252), Expect(2) = 4e-035
Identities = 48/54 (88%), Positives = 50/54 (92%)
Frame = -2 / +2
Query: 523 NNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGP 362
N LCYTYARCTRSVSIVP AYYAHLAAFRARFYMEPD +DSGS+ASGATTSR P
Sbjct: 2 NILCYTYARCTRSVSIVPRAYYAHLAAFRARFYMEPDAADSGSMASGATTSRAP 163
Score = 96.4 bits (204), Expect(2) = 4e-029
Identities = 38/59 (64%), Positives = 43/59 (72%)
Frame = +1 / -3
Query: 346 CAPLVEGHGLS*HRSPQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSC 522
C + GHGLS*H SP C + APC++ELGRLP EH+M EERLILS CT HTCNT C
Sbjct: 179 CCVPLLGHGLS*HHSP*THCQRHPAPCRSELGRLPGEHNMHEERLILSECT*HTCNTGC 3
Score = 95.0 bits (201), Expect(2) = 2e-025
Identities = 40/54 (74%), Positives = 44/54 (81%)
Frame = -1 / +1
Query: 524 QQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGARYK*QRICGERCYDKPWP 363
Q VLHVC VH+LSINRSSCILCS GSLPSS+LHGA +*Q + GE CYDKP P
Sbjct: 1 QHPVLHVC*VHSLSINRSSCILCSPGSLPSSLLHGAGCR*QWVYGEWCYDKPCP 162
Score = 92.3 bits (195), Expect(2) = 1e-027
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = -3 / +3
Query: 522 TTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLWRAVLRQAV 367
T+CVTRM GA AQYQSFL+H ML WQPSEL TWS++ +T LWR VLRQAV
Sbjct: 3 TSCVTRMLGALAQYQSFLVHIMLTWQPSELASTWSRMPLTVGLWRVVLRQAV 158
Score = 87.7 bits (185), Expect(2) = 7e-026
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +2 / -1
Query: 368 TACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVV 523
TACRST RHR V+ I LHV+ SSEGCQ+SI+C RND*Y*A AP IRVTQ V
Sbjct: 157 TACRSTTRHRPTVSGIRLHVEASSEGCQVSIICTRND*Y*ASAPSIRVTQDV 2
Score = 53.3 bits (110), Expect(2) = 4e-029
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +1 / -3
Query: 292 P*GQVMASQQHLQHQPWCCAPLV 360
P*G VMAS+QH QHQPWCC PL+
Sbjct: 230 P*GPVMASRQHFQHQPWCCVPLL 162
Score = 52.4 bits (108), Expect(2) = 1e-027
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = -2 / +2
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKE 290
+ T+ P GARNTRAG NVAVRPLPALKE
Sbjct: 134 ASGATTSRAPGGARNTRAGVGNVAVRPLPALKE 232
Score = 51.5 bits (106), Expect(2) = 4e-035
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1 / +1
Query: 356 RGAQHQGWCCKCCCEAITCPQG 291
RG QHQGWC KCC EAIT PQG
Sbjct: 166 RGTQHQGWCWKCCREAITGPQG 231
Score = 51.0 bits (105), Expect(2) = 7e-026
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2 / -1
Query: 290 FLEGR*WPHSNICSTSPGVARPWW 361
FLEGR*WPH NI +TSPGVA P W
Sbjct: 232 FLEGR*WPHGNISNTSPGVACPSW 161
Score = 42.3 bits (86), Expect(2) = 2e-025
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +3
Query: 357 QGRATPGLVLQMLL*GHYLPSR 292
+G ATPGLVL+ML *GHY PSR
Sbjct: 165 EGHATPGLVLEMLP*GHYRPSR 230
>gb|CW330845.1|CW330845 104_827_11480592_148_36009_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480592, DNA
sequence
Length = 727
Score = 78.0 bits (164), Expect(3) = 1e-023
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = -2 / -2
Query: 475 VPPAYYAHLAAFRARFYMEPDTSDSGSVASGA 380
VPPAYYAHLAAFRARFYMEPDTSDSGS+ASGA
Sbjct: 453 VPPAYYAHLAAFRARFYMEPDTSDSGSMASGA 358
Score = 74.8 bits (157), Expect(4) = 5e-034
Identities = 32/49 (65%), Positives = 36/49 (73%)
Frame = -2 / -2
Query: 406 DSGSVASGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
D+ S A+ +RGPPPG GA +VAVRPLPALKENVKRVMFYC*
Sbjct: 393 DTSDSGSMASGARGPPPGGARGIRGAGSVAVRPLPALKENVKRVMFYC* 247
Score = 64.8 bits (135), Expect(4) = 6e-029
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +3 / +2
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLVVA 383
Q*NMTRFTFSLRAG GLTAT AP + PGGGPR +A
Sbjct: 251 Q*NMTRFTFSLRAGRGLTATLPAPLMPRAPPGGGPRAPLA 370
Score = 50.6 bits (104), Expect(4) = 6e-029
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1 / +3
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSM 465
P C YLAPC++ELGRLPDEHSM
Sbjct: 369 PLTHCQRYLAPCRSELGRLPDEHSM 443
Score = 49.6 bits (102), Expect(4) = 5e-034
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -3 / -3
Query: 465 HTMLIWQPSELGFTWSQIQVTADLW 391
HTMLIWQPSEL TWSQI +T W
Sbjct: 443 HTMLIWQPSELASTWSQIPLTVGQW 369
Score = 49.2 bits (101), Expect(4) = 5e-034
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = -2 / -3
Query: 565 DENKFTADGLQTLTNNLCYT 506
DENKFTAD LQTLTNNLCYT
Sbjct: 725 DENKFTADELQTLTNNLCYT 666
Score = 41.4 bits (84), Expect(4) = 6e-029
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 504 YV*HKLLVRVCNPSAVNLFSS 566
YV*H+L VRVC+ SAVNLFSS
Sbjct: 664 YV*HRLFVRVCSSSAVNLFSS 726
Score = 37.7 bits (76), Expect(3) = 1e-023
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -1 / -1
Query: 371 PWPSTRGAQHQGWCCKCCCEAITCPQGKREARHV 270
PW STR +CC +A T QGKREA HV
Sbjct: 358 PWASTRWGTRHQRGRECCGQAPTRSQGKREACHV 257
Score = 37.3 bits (75), Expect(3) = 1e-023
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -3 / -1
Query: 567 GMRTNLRLMGCKLSPTTCVTR 505
GMRT+L+LM C+L TTC TR
Sbjct: 727 GMRTSLQLMSCRL*QTTCATR 665
Score = 28.1 bits (55), Expect(4) = 5e-034
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -1
Query: 505 YARCTRSVSIVPPA 464
YARCTRSVSI P+
Sbjct: 583 YARCTRSVSIGKPS 542
Score = 27.6 bits (54), Expect(4) = 6e-029
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / +3
Query: 468 GGTIDTERVHLAYV 509
G IDTERVHLAY+
Sbjct: 546 GLPIDTERVHLAYL 587
>gb|CL185414.1|CL185414 104_399_10899512_116_32395_024 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899512, DNA
sequence
Length = 643
Score = 100 bits (213), Expect(3) = 8e-034
Identities = 39/52 (75%), Positives = 45/52 (86%)
Frame = -2 / -2
Query: 823 AIRKACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPGTV 668
A +ACASLE +YQPPVTFVVVQKRHHTRLF NNH D+ + D+SGNILPG+V
Sbjct: 234 AFLQACASLEPNYQPPVTFVVVQKRHHTRLFANNHKDRSSMDKSGNILPGSV 79
Score = 55.1 bits (114), Expect(3) = 8e-034
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -2 / -2
Query: 880 YRDGVSEGQFYQVLLYELDAIRK 812
+RDGVSEGQFYQVLLYELDAIRK
Sbjct: 369 FRDGVSEGQFYQVLLYELDAIRK 301
Score = 31.8 bits (63), Expect(3) = 8e-034
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -2 / -3
Query: 916 RATGQKPKRIIFYR 875
+ATGQKP RIIFYR
Sbjct: 638 KATGQKPLRIIFYR 597
>gb|DN551859.1|DN551859 pSPR-RT-MR-H1_C07_C263 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 1523
Score = 144 bits (309), Expect = 2e-033
Identities = 57/124 (45%), Positives = 78/124 (62%)
Frame = -2 / -1
Query: 727 NNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 548
N+H N+LPGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 731 NHHTKFFQTGSPDNVLPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 552
Query: 547 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSR 368
AD +Q ++L Y Y R T ++S+V P YAHLAA + +++ + S + G TS
Sbjct: 551 ADEMQEFVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGTFLKFEEMSDTSSSQGGHTSA 372
Query: 367 GPPP 356
G P
Sbjct: 371 GSAP 360
Score = 75.3 bits (158), Expect(2) = 5e-021
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = -2 / -1
Query: 904 QKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQKRHHTRLFVN 725
+KP II +RDGVSE QF QV+ ELD I +AC L+ + P T +V QK HHT+ F
Sbjct: 884 RKPDHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQT 705
Query: 724 NHND 713
D
Sbjct: 704 GSPD 693
Score = 47.3 bits (97), Expect(2) = 5e-021
Identities = 24/47 (51%), Positives = 27/47 (57%)
Frame = -3 / -2
Query: 672 LWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTNLRLMGCK 532
L WT +FAI +L STC ML EQ PIIMFC MR L C+
Sbjct: 676 LSWTIKFAILRTLTSTCVHMLG*LEQQGRPIIMFCTMR*VSLLTKCR 536
>gb|BF176662.1|BF176662 EM1_1_E11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 627
Score = 143 bits (306), Expect = 5e-033
Identities = 55/111 (49%), Positives = 75/111 (67%)
Frame = -2 / +1
Query: 688 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCY 509
N+LPGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 1 NVLPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 180
Query: 508 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGPPP 356
Y R T ++S+V P YAHLAA + +++ + S + G TS G P
Sbjct: 181 VYQRSTTAISVVAPICYAHLAAAQVGTFLKFEEMSDTSSSQGGHTSAGSAP 333
>gb|CW411648.1|CW411648 fsbb001f106o17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f106o17, DNA
sequence
Length = 773
Score = 122 bits (262), Expect(2) = 1e-032
Identities = 52/77 (67%), Positives = 58/77 (75%)
Frame = -2 / -1
Query: 880 YRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAA 701
+RDGVSEGQF VLL+E+DAIRKACAS+E Y PPVTFVVVQKRHHTRLF H +
Sbjct: 350 FRDGVSEGQFSHVLLHEMDAIRKACASMEDGYLPPVTFVVVQKRHHTRLFPEVHGRRDLT 171
Query: 700 DRSGNILPGTVVDSKIC 650
D+SGNILPG D C
Sbjct: 170 DKSGNILPG*YHDVHPC 120
Score = 39.1 bits (79), Expect(2) = 1e-032
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -2 / -1
Query: 934 LLISFWRATGQKPKRIIFYR 875
LL SF++ TG+KPKRIIFYR
Sbjct: 479 LLTSFFKRTGRKPKRIIFYR 420
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,372,660,960
Number of Sequences: 832831
Number of extensions: 22778336
Number of successful extensions: 170693
Number of sequences better than 1.0e-020: 93
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 31854829770
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)