TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3336950.2.1
(645 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD424983.1|CD424983 SA1_9_H04.g1_A002 Salicylic acid-tre... 349 1e-095
gb|BE358332.1|BE358332 DG1_29_C02.b1_A002 Dark Grown 1 (DG1... 346 9e-095
gb|BG560033.1|BG560033 RHIZ2_68_F03.b1_A003 Rhizome2 (RHIZ2... 282 1e-086
gb|BM323368.1|BM323368 PIC1_18_E04.b1_A002 Pathogen-infecte... 310 5e-084
gb|CD424271.1|CD424271 SA1_4_H05.g1_A002 Salicylic acid-tre... 293 6e-079
gb|CD232496.1|CD232496 SS1_45_A09.g1_A012 Salt-stressed see... 254 3e-074
gb|CX622776.1|CX622776 GABR1_65_H12.g1_A002 GA- or brassino... 182 1e-065
gb|BG556638.1|BG556638 EM1_37_G04.b1_A002 Embryo 1 (EM1) So... 226 8e-059
gb|BI098360.1|BI098360 IP1_31_E11.b1_A002 Immature pannicle... 204 2e-054
gb|CD231662.1|CD231662 SS1_22_F04.g1_A012 Salt-stressed see... 178 3e-054
gb|CW469202.1|CW469202 fsbb001f221m21f0 Sorghum methylation... 168 1e-052
gb|AC169378.1| Sorghum bicolor clone SB_BBc0007L02, WORKING... 145 2e-051
gb|BG488202.1|BG488202 RHIZ2_60_G05.b1_A003 Rhizome2 (RHIZ2... 155 4e-049
gb|CW262291.1|CW262291 104_729_11229977_116_35209_067 Sorgh... 158 8e-047
gb|BI351404.1|BI351404 IP1_71_B10.b1_A002 Immature pannicle... 118 2e-045
gb|BG273563.1|BG273563 OV2_27_C04.b1_A002 Ovary 2 (OV2) Sor... 141 3e-043
gb|CW469203.1|CW469203 fsbb001f221m21k0 Sorghum methylation... 105 7e-040
gb|CN133998.1|CN133998 OX1_19_D01.g1_A002 Oxidatively-stres... 127 4e-038
gb|BI140713.1|BI140713 IP1_52_H01.b1_A002 Immature pannicle... 150 1e-035
gb|CW169583.1|CW169583 104_579_11154749_116_36503_021 Sorgh... 145 7e-034
gb|CW206795.1|CW206795 104_635_11187778_148_36966_037 Sorgh... 145 7e-034
gb|CF431332.1|CF431332 NIT1_5_E04.g1_A002 Nitrogen-deficien... 138 8e-032
gb|BG322938.1|BG322938 EM1_15_H09.b1_A002 Embryo 1 (EM1) So... 133 5e-031
gb|CW262292.1|CW262292 104_729_11229977_148_35205_067 Sorgh... 88 2e-030
gb|CW315229.1|CW315229 104_806_11472253_148_35827_059 Sorgh... 54 5e-024
gb|BI075789.1|BI075789 IP1_21_C05.b1_A002 Immature pannicle... 108 7e-023
gb|BI075931.1|BI075931 IP1_23_B05.b1_A002 Immature pannicle... 108 7e-023
gb|CW792157.1|CW792157 SP__Ba0089F13.f SP__Ba Sorghum propi... 107 2e-022
>gb|CD424983.1|CD424983 SA1_9_H04.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_9_H04_A002 5', mRNA sequence
Length = 704
Score = 349 bits (756), Expect(2) = 1e-095
Identities = 138/160 (86%), Positives = 150/160 (93%)
Frame = -1 / +2
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L C+GC+C E+EATQTATL VDA+PQLARKIP+TLFGIFFEEINHAGAGGIWAELV
Sbjct: 140 LLLFCVGCRCRPLEIEATQTATLKVDATPQLARKIPETLFGIFFEEINHAGAGGIWAELV 319
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGVG 121
+NRGFEAGG HTPSNIDPWSIIGDDSS+FV TDRTSCFSRNIVALRMEVLC++CP GGVG
Sbjct: 320 NNRGFEAGGPHTPSNIDPWSIIGDDSSIFVATDRTSCFSRNIVALRMEVLCNDCPAGGVG 499
Query: 120 VYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
VYNPGFWGMNIE+GK YNLVM+VKSPETTDLTVSLTSS+G
Sbjct: 500 VYNPGFWGMNIEDGKAYNLVMYVKSPETTDLTVSLTSSDG 619
Score = 315 bits (683), Expect = 3e-085
Identities = 136/163 (83%), Positives = 144/163 (88%)
Frame = +2 / -3
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRATMF 181
P ELV+ETVKSVVSGDLT ITRL* FPSSMFMPQ PGL*TPTPP GQ QRTSILRATMF
Sbjct: 618 PSELVNETVKSVVSGDLTYITRL*AFPSSMFMPQKPGL*TPTPPAGQSLQRTSILRATMF 439
Query: 182 RLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIP 361
RLKHDVRSV+TN EESSPMMDHGSMFDGV PPAS PLLLTSSAHMPPAPAWLISSK IP
Sbjct: 438 RLKHDVRSVATNIEESSPMMDHGSMFDGV*GPPASKPLLLTSSAHMPPAPAWLISSKNIP 259
Query: 362 NSVSGIFRASCGEASTARVAVWVASTSDARHLQPMQSRNKKRR 490
N+VSGIFRASCG AST RVAVWVAS S RHLQP Q+R++ ++
Sbjct: 258 NNVSGIFRASCGVASTLRVAVWVASISKGRHLQPTQNRSRTQK 130
Score = 235 bits (508), Expect = 4e-061
Identities = 97/132 (73%), Positives = 104/132 (78%)
Frame = -3 / +1
Query: 397 AAACSEDP*YTVRDLL*GDQPCRGWWHMG*TC**QRV*SWRPPYSIKH*PMVHHWRRLLC 218
A AC EDP* + D+ *GD PCRG WHMG C *QR SWRP YSIKH*P+VHHWR LL
Sbjct: 223 ATACPEDP*NIIWDIF*GD*PCRGRWHMGRACQ*QRFRSWRPSYSIKH*PVVHHWR*LLY 402
Query: 217 ICGDRSYIMFQSKHRCSQDGGPLR*LSYWWCWCLQPRVLGHEHRRRKGLQSCYVC*VTRN 38
I GD SYIMFQ KH CS+DGGPL *LS WWCWCLQPR LGHEHRR +GLQSCYVC*V+ N
Sbjct: 403 IRGD*SYIMFQPKHCCSEDGGPL**LSSWWCWCLQPRFLGHEHRRWEGLQSCYVC*VSGN 582
Query: 37 N*LDSFTNKL*R 2
N +SF NKL*R
Sbjct: 583 NGFNSFINKL*R 618
Score = 230 bits (496), Expect = 2e-059
Identities = 100/158 (63%), Positives = 115/158 (72%)
Frame = +3 / -1
Query: 3 R*SLLVKLSSQLFLVT*QT*QDCRPFLLLCSCPKTLGCKHQHHQ*DNYRKGPPS*EQRCF 182
R SLL+KL + LF T* T*QDC+P LLCSCPK LGCKHQHHQ D++ +GPPS EQ+CF
Sbjct: 617 RQSLLMKLLNPLFPET*HT*QDCKPSHLLCSCPKNLGCKHQHHQLDSHYRGPPSSEQQCF 438
Query: 183 D*NMMYDRSPQIQRSRLQ*WTMGQCLMEYGGLQLQTLCY*QVQPICHQPLHG*SPQRRSR 362
*NMMYD+SP+I RS LQ*WT GQCLMEY GLQL+ LCY*Q PICH+PLHG*SPQ+ S+
Sbjct: 437 G*NMMYDQSPRI*RSHLQ*WTTGQCLMEYEGLQLRNLCY*QALPICHRPLHG*SPQKISQ 258
Query: 363 TVYQGSSEQXXXXXXXXXXXXXWPLPLMPGICSLCRAE 476
++QGSS Q WPL L ICS R E
Sbjct: 257 IMFQGSSGQAVAWHQP*GLLSGWPLFLKADICSPHRIE 144
Score = 230 bits (496), Expect = 2e-059
Identities = 95/135 (70%), Positives = 109/135 (80%)
Frame = +1 / -2
Query: 4 VRAC**NCQVSCFW*LNKHNKIVDLSFFYVHAPKPWVVNTNTTSRTIIAKDLHPESNDVS 183
VRAC**NC + CF LN HNKIV L FYVHAPK WVVNTNTTS T+I +DLHP+SN+VS
Sbjct: 616 VRAC**NC*IRCFRRLNIHNKIVSLPIFYVHAPKTWVVNTNTTSWTVITEDLHPQSNNVS 437
Query: 184 TET*CTIGLHKYRGVVSNDGPWVNV*WSMEASSFKPSVTNKFSPYATSPCMVDLLKEDPE 363
ET*CTI H+YRGV+SNDGP VNV*WSM ASSF+ SV +K PYAT PCMV+LLK+ P+
Sbjct: 436 AET*CTISRHEYRGVISNDGPRVNV*WSMRASSFETSVIDKLCPYATGPCMVNLLKKYPK 257
Query: 364 QCIRDLPSKLRRGVH 408
C RDLP KL RG++
Sbjct: 256 *CFRDLPGKLWRGIN 212
Score = 178 bits (384), Expect = 6e-044
Identities = 89/130 (68%), Positives = 94/130 (72%)
Frame = -2 / +3
Query: 392 SLLGRSLIHCSGSSLRRSTMQGLVAYGLNLLVTEGLKLEASILHQTLTHGPSLETTPLYL 213
SL GRSL H G LRR TMQG VAYG +L +TE KLEA ILHQTLT GPSLE TPLY
Sbjct: 228 SLPGRSLKHYLGYFLRRLTMQGPVAYGQSLSITEVSKLEALILHQTLTRGPSLEMTPLYS 407
Query: 212 WRPIVHHVSVETSLLSGWRSFAIIXXXXXXVFTTQGFGA*T*KKERSTILLCLLSHQKQL 33
WR IVHHVS ET LL GWRS + VFTTQ FGA*T*K R TILLC+LS +KQ
Sbjct: 408 WRLIVHHVSAETLLL*GWRSSVMTVQLVVLVFTTQVFGA*T*KMGRLTILLCMLSLRKQR 587
Query: 32 T*QFH*QALT 3
*QFH*QALT
Sbjct: 588 I*QFH*QALT 617
Score = 22.6 bits (43), Expect(2) = 1e-095
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -2 / +3
Query: 596 GWWMHACMV 570
GWWMH ++
Sbjct: 42 GWWMHDTLI 68
>gb|BE358332.1|BE358332 DG1_29_C02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 610
Score = 346 bits (749), Expect(2) = 9e-095
Identities = 137/158 (86%), Positives = 148/158 (93%)
Frame = -1 / +1
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L C+GC+C E+EATQTATL VDA+PQLARKIP+TLFGIFFEEINHAGAGGIWAELV
Sbjct: 136 LLLFCVGCRCRPLEIEATQTATLKVDATPQLARKIPETLFGIFFEEINHAGAGGIWAELV 315
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGVG 121
+NRGFEAGG HTPSNIDPWSIIGDDSS+FV TDRTSCFSRNIVALRMEVLC++CP GGVG
Sbjct: 316 NNRGFEAGGPHTPSNIDPWSIIGDDSSIFVATDRTSCFSRNIVALRMEVLCNDCPAGGVG 495
Query: 120 VYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSS 7
VYNPGFWGMNIE+GK YNLVM+VKSPETTDLTVSLTSS
Sbjct: 496 VYNPGFWGMNIEDGKAYNLVMYVKSPETTDLTVSLTSS 609
Score = 313 bits (678), Expect = 2e-084
Identities = 135/161 (83%), Positives = 143/161 (88%)
Frame = +2 / -3
Query: 8 ELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRATMFRL 187
ELV+ETVKSVVSGDLT ITRL* FPSSMFMPQ PGL*TPTPP GQ QRTSILRATMFRL
Sbjct: 608 ELVNETVKSVVSGDLTYITRL*AFPSSMFMPQKPGL*TPTPPAGQSLQRTSILRATMFRL 429
Query: 188 KHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIPNS 367
KHDVRSV+TN EESSPMMDHGSMFDGV PPAS PLLLTSSAHMPPAPAWLISSK IPN+
Sbjct: 428 KHDVRSVATNIEESSPMMDHGSMFDGV*GPPASKPLLLTSSAHMPPAPAWLISSKNIPNN 249
Query: 368 VSGIFRASCGEASTARVAVWVASTSDARHLQPMQSRNKKRR 490
VSGIFRASCG AST RVAVWVAS S RHLQP Q+R++ ++
Sbjct: 248 VSGIFRASCGVASTLRVAVWVASISKGRHLQPTQNRSRTQK 126
Score = 232 bits (502), Expect = 3e-060
Identities = 95/130 (73%), Positives = 102/130 (78%)
Frame = -3 / +3
Query: 397 AAACSEDP*YTVRDLL*GDQPCRGWWHMG*TC**QRV*SWRPPYSIKH*PMVHHWRRLLC 218
A AC EDP* + D+ *GD PCRG WHMG C *QR SWRP YSIKH*P+VHHWR LL
Sbjct: 219 ATACPEDP*NIIWDIF*GD*PCRGRWHMGRACQ*QRFRSWRPSYSIKH*PVVHHWR*LLY 398
Query: 217 ICGDRSYIMFQSKHRCSQDGGPLR*LSYWWCWCLQPRVLGHEHRRRKGLQSCYVC*VTRN 38
I GD SYIMFQ KH CS+DGGPL *LS WWCWCLQPR LGHEHRR +GLQSCYVC*V+ N
Sbjct: 399 IRGD*SYIMFQPKHCCSEDGGPL**LSSWWCWCLQPRFLGHEHRRWEGLQSCYVC*VSGN 578
Query: 37 N*LDSFTNKL 8
N +SF NKL
Sbjct: 579 NGFNSFINKL 608
Score = 229 bits (495), Expect = 3e-059
Identities = 99/156 (63%), Positives = 114/156 (73%)
Frame = +3 / -1
Query: 9 SLLVKLSSQLFLVT*QT*QDCRPFLLLCSCPKTLGCKHQHHQ*DNYRKGPPS*EQRCFD* 188
SLL+KL + LF T* T*QDC+P LLCSCPK LGCKHQHHQ D++ +GPPS EQ+CF *
Sbjct: 607 SLLMKLLNPLFPET*HT*QDCKPSHLLCSCPKNLGCKHQHHQLDSHYRGPPSSEQQCFG* 428
Query: 189 NMMYDRSPQIQRSRLQ*WTMGQCLMEYGGLQLQTLCY*QVQPICHQPLHG*SPQRRSRTV 368
NMMYD+SP+I RS LQ*WT GQCLMEY GLQL+ LCY*Q PICH+PLHG*SPQ+ S+ +
Sbjct: 427 NMMYDQSPRI*RSHLQ*WTTGQCLMEYEGLQLRNLCY*QALPICHRPLHG*SPQKISQIM 248
Query: 369 YQGSSEQXXXXXXXXXXXXXWPLPLMPGICSLCRAE 476
+QGSS Q WPL L ICS R E
Sbjct: 247 FQGSSGQAVAWHQP*GLLSGWPLFLKADICSPHRIE 140
Score = 228 bits (492), Expect = 7e-059
Identities = 94/134 (70%), Positives = 108/134 (80%)
Frame = +1 / -2
Query: 7 RAC**NCQVSCFW*LNKHNKIVDLSFFYVHAPKPWVVNTNTTSRTIIAKDLHPESNDVST 186
RAC**NC + CF LN HNKIV L FYVHAPK WVVNTNTTS T+I +DLHP+SN+VS
Sbjct: 609 RAC**NC*IRCFRRLNIHNKIVSLPIFYVHAPKTWVVNTNTTSWTVITEDLHPQSNNVSA 430
Query: 187 ET*CTIGLHKYRGVVSNDGPWVNV*WSMEASSFKPSVTNKFSPYATSPCMVDLLKEDPEQ 366
ET*CTI H+YRGV+SNDGP VNV*WSM ASSF+ SV +K PYAT PCMV+LLK+ P+
Sbjct: 429 ET*CTISRHEYRGVISNDGPRVNV*WSMRASSFETSVIDKLCPYATGPCMVNLLKKYPK* 250
Query: 367 CIRDLPSKLRRGVH 408
C RDLP KL RG++
Sbjct: 249 CFRDLPGKLWRGIN 208
Score = 176 bits (379), Expect = 3e-043
Identities = 88/129 (68%), Positives = 93/129 (72%)
Frame = -2 / +2
Query: 392 SLLGRSLIHCSGSSLRRSTMQGLVAYGLNLLVTEGLKLEASILHQTLTHGPSLETTPLYL 213
SL GRSL H G LRR TMQG VAYG +L +TE KLEA ILHQTLT GPSLE TPLY
Sbjct: 224 SLPGRSLKHYLGYFLRRLTMQGPVAYGQSLSITEVSKLEALILHQTLTRGPSLEMTPLYS 403
Query: 212 WRPIVHHVSVETSLLSGWRSFAIIXXXXXXVFTTQGFGA*T*KKERSTILLCLLSHQKQL 33
WR IVHHVS ET LL GWRS + VFTTQ FGA*T*K R TILLC+LS +KQ
Sbjct: 404 WRLIVHHVSAETLLL*GWRSSVMTVQLVVLVFTTQVFGA*T*KMGRLTILLCMLSLRKQR 583
Query: 32 T*QFH*QAL 6
*QFH*QAL
Sbjct: 584 I*QFH*QAL 610
Score = 22.6 bits (43), Expect(2) = 9e-095
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -2 / +2
Query: 596 GWWMHACMV 570
GWWMH ++
Sbjct: 38 GWWMHDTLI 64
>gb|BG560033.1|BG560033 RHIZ2_68_F03.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 489
Score = 282 bits (610), Expect(4) = 1e-086
Identities = 112/121 (92%), Positives = 118/121 (97%)
Frame = -1 / +1
Query: 492 LLRFLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 313
+L FLFL C+GCKCLASE+EATQTATL VDASPQLARKIPDTLFGIFFEEINHAGAGGIW
Sbjct: 127 ILCFLFLFCLGCKCLASELEATQTATLTVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 306
Query: 312 AELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPT 133
AELVSNRGFEAGGLHTPSNIDPWSIIGDDSS++VETDRTSCFSRNI+ALRMEVLCDNCPT
Sbjct: 307 AELVSNRGFEAGGLHTPSNIDPWSIIGDDSSIYVETDRTSCFSRNIIALRMEVLCDNCPT 486
Query: 132 G 130
G
Sbjct: 487 G 489
Score = 266 bits (576), Expect(3) = 3e-079
Identities = 113/130 (86%), Positives = 117/130 (90%)
Frame = +2 / -2
Query: 131 PVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSS 310
PVGQLSQRTSILRA MFRLKHDVRSVST EESSPMMDHGSMFDGVWRPPAS PLLLTSS
Sbjct: 488 PVGQLSQRTSILRAMMFRLKHDVRSVSTYIEESSPMMDHGSMFDGVWRPPASKPLLLTSS 309
Query: 311 AHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARHLQPMQSRNKKRR 490
AHMPPAPAWLISSKKIPNSVSGIFRASCGEAST RVAVWVAS SDARHLQP Q+RNKK+R
Sbjct: 308 AHMPPAPAWLISSKKIPNSVSGIFRASCGEASTVRVAVWVASNSDARHLQPKQNRNKKQR 129
Query: 491 RTARGAASLL 520
A+ L+
Sbjct: 128 MARGAASLLV 99
Score = 205 bits (443), Expect(3) = 4e-060
Identities = 89/122 (72%), Positives = 94/122 (77%)
Frame = +3 / -3
Query: 132 Q*DNYRKGPPS*EQRCFD*NMMYDRSPQIQRSRLQ*WTMGQCLMEYGGLQLQTLCY*QVQ 311
Q*D+YRKGPPS EQ CFD*NMM D+SP I +S LQ*WTMGQCLMEYGGLQLQ LCY*QVQ
Sbjct: 487 Q*DSYRKGPPSSEQ*CFD*NMMSDQSPHI*KSHLQ*WTMGQCLMEYGGLQLQNLCY*QVQ 308
Query: 312 PICHQPLHG*SPQRRSRTVYQGSSEQXXXXXXXXXXXXXWPLPLMPGICSLCRAETRSGG 491
PICHQ LHG*SPQRRS+ VYQGSSEQ WP LMPGICSL + ETRS G
Sbjct: 307 PICHQLLHG*SPQRRSQIVYQGSSEQAAARHRP*GSPSGWPPTLMPGICSLSKTETRSRG 128
Query: 492 GR 497
R
Sbjct: 127 WR 122
Score = 197 bits (425), Expect(3) = 2e-061
Identities = 79/90 (87%), Positives = 81/90 (90%)
Frame = -3 / +3
Query: 400 LAAACSEDP*YTVRDLL*GDQPCRGWWHMG*TC**QRV*SWRPPYSIKH*PMVHHWRRLL 221
LAAACSEDP*YT+ DLL*GDQPCR WWHMG*TC**QR *SWRPPYSIKH*PMVHHWR L
Sbjct: 219 LAAACSEDP*YTIWDLL*GDQPCRSWWHMG*TC**QRF*SWRPPYSIKH*PMVHHWR*LF 398
Query: 220 CICGDRSYIMFQSKHRCSQDGGPLR*LSYW 131
ICGD S IMFQSKH CS+DGGPLR*LSYW
Sbjct: 399 YICGD*SDIMFQSKHHCSEDGGPLR*LSYW 488
Score = 195 bits (421), Expect(3) = 1e-058
Identities = 80/92 (86%), Positives = 85/92 (92%)
Frame = +1 / -1
Query: 130 TSRTIIAKDLHPESNDVSTET*CTIGLHKYRGVVSNDGPWVNV*WSMEASSFKPSVTNKF 309
TSRT+IAKDLHP+SNDVSTET*C I LH YR V+SNDGPWVNV*WSMEASSFK SVTNKF
Sbjct: 489 TSRTVIAKDLHPQSNDVSTET*CPISLHIYRRVISNDGPWVNV*WSMEASSFKTSVTNKF 310
Query: 310 SPYATSPCMVDLLKEDPEQCIRDLPSKLRRGV 405
SPYATS CMVDLLKEDP+ CIRDLPSKLRRG+
Sbjct: 309 SPYATSSCMVDLLKEDPK*CIRDLPSKLRRGI 214
Score = 161 bits (347), Expect(4) = 3e-046
Identities = 73/83 (87%), Positives = 74/83 (89%)
Frame = -2 / +2
Query: 392 SLLGRSLIHCSGSSLRRSTMQGLVAYGLNLLVTEGLKLEASILHQTLTHGPSLETTPLYL 213
SLLGRSLIH GSSLRRSTMQ LVAYGLNLLVTE LKLEASILHQTLTHGPSLE T LY+
Sbjct: 227 SLLGRSLIHYLGSSLRRSTMQELVAYGLNLLVTEVLKLEASILHQTLTHGPSLEMTLLYM 406
Query: 212 WRPIVHHVSVETSLLSGWRSFAI 144
WR I HHVSVETSLL GWRSFAI
Sbjct: 407 WRLIGHHVSVETSLL*GWRSFAI 475
Score = 47.8 bits (98), Expect(3) = 2e-061
Identities = 22/52 (42%), Positives = 26/52 (50%)
Frame = -1 / +1
Query: 567 HAGPTRVDKWKRMGITSNDAAPRAVLLRFLFLLCIGCKCLASEVEATQTATL 412
H G TRVDKWKRMG + + A + FLF L C E T T T+
Sbjct: 58 HTGSTRVDKWKRMGTSKDAAPRAILCFLFLFCLGCKCLASELEATQTATLTV 213
Score = 40.5 bits (82), Expect(3) = 1e-058
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +2 / -2
Query: 473 RNKKRRRTARGAASLLVIPIRFHLSTLVGPAC 568
+N+ +++ A+ L++P+RFHLSTLV P C
Sbjct: 152 QNRNKKQRMARGAASLLVPMRFHLSTLVEPVC 57
Score = 39.1 bits (79), Expect(4) = 1e-086
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2 / +2
Query: 575 MVDTPAQPELTSGSVWV 525
M DTPAQPELTSGS WV
Sbjct: 50 MHDTPAQPELTSGSAWV 100
Score = 36.3 bits (73), Expect(3) = 3e-079
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +1 / -1
Query: 514 VAGNTHTLPLVNSGWAGVSTMH 579
V TH LPLVNSG AGVS +H
Sbjct: 111 VLAGTHALPLVNSG*AGVSCIH 46
Score = 35.4 bits (71), Expect(3) = 4e-060
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3 / -3
Query: 525 YPYASTCQLWLGRRVYH 575
YP ASTCQLWL R V H
Sbjct: 100 YPCASTCQLWLSRCVMH 50
Score = 34.1 bits (68), Expect(4) = 1e-086
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -2 / +2
Query: 614 ELASSFGWWMH 582
ELASSFGWWMH
Sbjct: 23 ELASSFGWWMH 55
Score = 32.7 bits (65), Expect(3) = 3e-079
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1 / -1
Query: 580 ACIHHPKEDASS 615
+CIHHPKEDASS
Sbjct: 57 SCIHHPKEDASS 22
Score = 31.8 bits (63), Expect(4) = 3e-046
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -3 / +3
Query: 568 TRRPNQS*QVEAYGYYQQR 512
T R NQS*QVEA+GY Q R
Sbjct: 57 THRLNQS*QVEAHGYQQGR 113
Score = 30.9 bits (61), Expect(3) = 2e-061
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3 / +3
Query: 616 GSSRLPSDGGCM 581
GSS LPSDGGCM
Sbjct: 21 GSSHLPSDGGCM 56
Score = 30.4 bits (60), Expect(3) = 1e-058
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / -3
Query: 582 MHPPSEGRRELP 617
MHPPSEGR ELP
Sbjct: 55 MHPPSEGRCELP 20
Score = 30.4 bits (60), Expect(3) = 4e-060
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +2 / -2
Query: 572 PCMHASTIRRKTRAP 616
P HASTIRRK RAP
Sbjct: 65 PVCHASTIRRKMRAP 21
Score = 26.7 bits (52), Expect(4) = 3e-046
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / +1
Query: 615 GARVFLRMVDA 583
GAR+FLRMVDA
Sbjct: 22 GARIFLRMVDA 54
Score = 24.0 bits (46), Expect(4) = 1e-086
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / +1
Query: 522 TSNDAAPRAVL 490
TS DAAPRA+L
Sbjct: 100 TSKDAAPRAIL 132
Score = 22.6 bits (43), Expect(4) = 3e-046
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3 / +3
Query: 496 RPPPLLVSALHRLQM 452
R P LLVS L RLQM
Sbjct: 123 RHPLLLVSVLLRLQM 167
>gb|BM323368.1|BM323368 PIC1_18_E04.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 532
Score = 310 bits (671), Expect(2) = 5e-084
Identities = 121/141 (85%), Positives = 131/141 (92%)
Frame = -1 / +3
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L C+GC+C E+EATQTATL VDA+PQLARKIP+TLFGIFFEEINHAGAGGIWAELV
Sbjct: 108 LLLFCVGCRCRPLEIEATQTATLKVDATPQLARKIPETLFGIFFEEINHAGAGGIWAELV 287
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGVG 121
+NRGFEAGG HTPSNIDPWSIIGDDSS+FV TDRTSCFSRNIVALRMEVLC++CP GGVG
Sbjct: 288 NNRGFEAGGPHTPSNIDPWSIIGDDSSIFVATDRTSCFSRNIVALRMEVLCNDCPAGGVG 467
Query: 120 VYNPGFWGMNIEEGKVYNLVM 58
VYNPGFWGMNIE+GK YNLVM
Sbjct: 468 VYNPGFWGMNIEDGKAYNLVM 530
Score = 282 bits (610), Expect = 4e-075
Identities = 120/144 (83%), Positives = 127/144 (88%)
Frame = +2 / -1
Query: 59 ITRL*TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPM 238
ITRL* FPSSMFMPQ PGL*TPTPP GQ QRTSILRATMFRLKHDVRSV+TN EESSPM
Sbjct: 529 ITRL*AFPSSMFMPQKPGL*TPTPPAGQSLQRTSILRATMFRLKHDVRSVATNIEESSPM 350
Query: 239 MDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARV 418
MDHGSMFDGV PPAS PLLLTSSAHMPPAPAWLISSK IPN+VSGIFRASCG AST RV
Sbjct: 349 MDHGSMFDGV*GPPASKPLLLTSSAHMPPAPAWLISSKNIPNNVSGIFRASCGVASTLRV 170
Query: 419 AVWVASTSDARHLQPMQSRNKKRR 490
AVWVAS S RHLQP Q+R++ ++
Sbjct: 169 AVWVASISKGRHLQPTQNRSRTQK 98
Score = 215 bits (464), Expect = 5e-055
Identities = 90/140 (64%), Positives = 103/140 (73%)
Frame = +3 / -2
Query: 57 T*QDCRPFLLLCSCPKTLGCKHQHHQ*DNYRKGPPS*EQRCFD*NMMYDRSPQIQRSRLQ 236
T*QDC+P LLCSCPK LGCKHQHHQ D++ +GPPS EQ+CF *NMMYD+SP+I RS LQ
Sbjct: 531 T*QDCKPSHLLCSCPKNLGCKHQHHQLDSHYRGPPSSEQQCFG*NMMYDQSPRI*RSHLQ 352
Query: 237 *WTMGQCLMEYGGLQLQTLCY*QVQPICHQPLHG*SPQRRSRTVYQGSSEQXXXXXXXXX 416
*WT GQCLMEY GLQL+ LCY*Q PICH+PLHG*SPQ+ S+ ++QGSS Q
Sbjct: 351 *WTTGQCLMEYEGLQLRNLCY*QALPICHRPLHG*SPQKISQIMFQGSSGQAVAWHQP*G 172
Query: 417 XXXXWPLPLMPGICSLCRAE 476
WPL L ICS R E
Sbjct: 171 LLSGWPLFLKADICSPHRIE 112
Score = 211 bits (456), Expect = 7e-054
Identities = 85/114 (74%), Positives = 90/114 (78%)
Frame = -3 / +2
Query: 397 AAACSEDP*YTVRDLL*GDQPCRGWWHMG*TC**QRV*SWRPPYSIKH*PMVHHWRRLLC 218
A AC EDP* + D+ *GD PCRG WHMG C *QR SWRP YSIKH*P+VHHWR LL
Sbjct: 191 ATACPEDP*NIIWDIF*GD*PCRGRWHMGRACQ*QRFRSWRPSYSIKH*PVVHHWR*LLY 370
Query: 217 ICGDRSYIMFQSKHRCSQDGGPLR*LSYWWCWCLQPRVLGHEHRRRKGLQSCYV 56
I GD SYIMFQ KH CS+DGGPL *LS WWCWCLQPR LGHEHRR +GLQSCYV
Sbjct: 371 IRGD*SYIMFQPKHCCSEDGGPL**LSSWWCWCLQPRFLGHEHRRWEGLQSCYV 532
Score = 206 bits (444), Expect = 3e-052
Identities = 83/117 (70%), Positives = 96/117 (82%)
Frame = +1 / -3
Query: 58 HNKIVDLSFFYVHAPKPWVVNTNTTSRTIIAKDLHPESNDVSTET*CTIGLHKYRGVVSN 237
HNKIV L FYVHAPK WVVNTNTTS T+I +DLHP+SN+VS ET*CTI H+YRGV+SN
Sbjct: 530 HNKIVSLPIFYVHAPKTWVVNTNTTSWTVITEDLHPQSNNVSAET*CTISRHEYRGVISN 351
Query: 238 DGPWVNV*WSMEASSFKPSVTNKFSPYATSPCMVDLLKEDPEQCIRDLPSKLRRGVH 408
DGP VNV*WSM ASSF+ SV +K PYAT PCMV+LLK+ P+ C RDLP KL RG++
Sbjct: 350 DGPRVNV*WSMRASSFETSVIDKLCPYATGPCMVNLLKKYPK*CFRDLPGKLWRGIN 180
Score = 154 bits (330), Expect = 2e-036
Identities = 76/112 (67%), Positives = 79/112 (70%)
Frame = -2 / +1
Query: 392 SLLGRSLIHCSGSSLRRSTMQGLVAYGLNLLVTEGLKLEASILHQTLTHGPSLETTPLYL 213
SL GRSL H G LRR TMQG VAYG +L +TE KLEA ILHQTLT GPSLE TPLY
Sbjct: 196 SLPGRSLKHYLGYFLRRLTMQGPVAYGQSLSITEVSKLEALILHQTLTRGPSLEMTPLYS 375
Query: 212 WRPIVHHVSVETSLLSGWRSFAIIXXXXXXVFTTQGFGA*T*KKERSTILLC 57
WR IVHHVS ET LL GWRS + VFTTQ FGA*T*K R TILLC
Sbjct: 376 WRLIVHHVSAETLLL*GWRSSVMTVQLVVLVFTTQVFGA*T*KMGRLTILLC 531
Score = 22.6 bits (43), Expect(2) = 5e-084
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -2 / +1
Query: 596 GWWMHACMV 570
GWWMH ++
Sbjct: 10 GWWMHDTLI 36
>gb|CD424271.1|CD424271 SA1_4_H05.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_4_H05_A002 5', mRNA sequence
Length = 661
Score = 293 bits (634), Expect(2) = 6e-079
Identities = 114/133 (85%), Positives = 124/133 (93%)
Frame = -1 / +2
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L C+GC+C E+EATQTATL VDA+PQLARKIP+TLFGIFFEEINHAGAGGIWAELV
Sbjct: 263 LLLFCVGCRCRPLEIEATQTATLKVDATPQLARKIPETLFGIFFEEINHAGAGGIWAELV 442
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGVG 121
+NRGFEAGG HTPSNIDPWSIIGDDSS+FV TDRTSCFSRNIVALRMEVLC++CP GGVG
Sbjct: 443 NNRGFEAGGPHTPSNIDPWSIIGDDSSIFVATDRTSCFSRNIVALRMEVLCNDCPAGGVG 622
Query: 120 VYNPGFWGMNIEE 82
VYNPGFWGMNIE+
Sbjct: 623 VYNPGFWGMNIED 661
Score = 267 bits (578), Expect = 1e-070
Identities = 113/136 (83%), Positives = 120/136 (88%)
Frame = +2 / -2
Query: 83 SSMFMPQNPGL*TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFD 262
SSMFMPQ PGL*TPTPP GQ QRTSILRATMFRLKHDVRSV+TN EESSPMMDHGSMFD
Sbjct: 660 SSMFMPQKPGL*TPTPPAGQSLQRTSILRATMFRLKHDVRSVATNIEESSPMMDHGSMFD 481
Query: 263 GVWRPPASNPLLLTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAVWVASTS 442
GV PPAS PLLLTSSAHMPPAPAWLISSK IPN+VSGIFRASCG AST RVAVWVAS S
Sbjct: 480 GV*GPPASKPLLLTSSAHMPPAPAWLISSKNIPNNVSGIFRASCGVASTLRVAVWVASIS 301
Query: 443 DARHLQPMQSRNKKRR 490
RHLQP Q+R++ ++
Sbjct: 300 KGRHLQPTQNRSRTQK 253
Score = 201 bits (434), Expect = 7e-051
Identities = 84/131 (64%), Positives = 96/131 (73%)
Frame = +3 / -3
Query: 84 LLCSCPKTLGCKHQHHQ*DNYRKGPPS*EQRCFD*NMMYDRSPQIQRSRLQ*WTMGQCLM 263
LLCSCPK LGCKHQHHQ D++ +GPPS EQ+CF *NMMYD+SP+I RS LQ*WT GQCLM
Sbjct: 659 LLCSCPKNLGCKHQHHQLDSHYRGPPSSEQQCFG*NMMYDQSPRI*RSHLQ*WTTGQCLM 480
Query: 264 EYGGLQLQTLCY*QVQPICHQPLHG*SPQRRSRTVYQGSSEQXXXXXXXXXXXXXWPLPL 443
EY GLQL+ LCY*Q PICH+PLHG*SPQ+ S+ ++QGSS Q WPL L
Sbjct: 479 EYEGLQLRNLCY*QALPICHRPLHG*SPQKISQIMFQGSSGQAVAWHQP*GLLSGWPLFL 300
Query: 444 MPGICSLCRAE 476
ICS R E
Sbjct: 299 KADICSPHRIE 267
Score = 194 bits (419), Expect = 8e-049
Identities = 78/105 (74%), Positives = 82/105 (78%)
Frame = -3 / +1
Query: 397 AAACSEDP*YTVRDLL*GDQPCRGWWHMG*TC**QRV*SWRPPYSIKH*PMVHHWRRLLC 218
A AC EDP* + D+ *GD PCRG WHMG C *QR SWRP YSIKH*P+VHHWR LL
Sbjct: 346 ATACPEDP*NIIWDIF*GD*PCRGRWHMGRACQ*QRFRSWRPSYSIKH*PVVHHWR*LLY 525
Query: 217 ICGDRSYIMFQSKHRCSQDGGPLR*LSYWWCWCLQPRVLGHEHRR 83
I GD SYIMFQ KH CS+DGGPL *LS WWCWCLQPR LGHEHRR
Sbjct: 526 IRGD*SYIMFQPKHCCSEDGGPL**LSSWWCWCLQPRFLGHEHRR 660
Score = 192 bits (414), Expect = 4e-048
Identities = 77/108 (71%), Positives = 90/108 (83%)
Frame = +1 / -1
Query: 85 FYVHAPKPWVVNTNTTSRTIIAKDLHPESNDVSTET*CTIGLHKYRGVVSNDGPWVNV*W 264
FYVHAPK WVVNTNTTS T+I +DLHP+SN+VS ET*CTI H+YRGV+SNDGP VNV*W
Sbjct: 658 FYVHAPKTWVVNTNTTSWTVITEDLHPQSNNVSAET*CTISRHEYRGVISNDGPRVNV*W 479
Query: 265 SMEASSFKPSVTNKFSPYATSPCMVDLLKEDPEQCIRDLPSKLRRGVH 408
SM ASSF+ SV +K PYAT PCMV+LLK+ P+ C RDLP KL RG++
Sbjct: 478 SMRASSFETSVIDKLCPYATGPCMVNLLKKYPK*CFRDLPGKLWRGIN 335
Score = 142 bits (304), Expect = 6e-033
Identities = 70/103 (67%), Positives = 73/103 (70%)
Frame = -2 / +3
Query: 392 SLLGRSLIHCSGSSLRRSTMQGLVAYGLNLLVTEGLKLEASILHQTLTHGPSLETTPLYL 213
SL GRSL H G LRR TMQG VAYG +L +TE KLEA ILHQTLT GPSLE TPLY
Sbjct: 351 SLPGRSLKHYLGYFLRRLTMQGPVAYGQSLSITEVSKLEALILHQTLTRGPSLEMTPLYS 530
Query: 212 WRPIVHHVSVETSLLSGWRSFAIIXXXXXXVFTTQGFGA*T*K 84
WR IVHHVS ET LL GWRS + VFTTQ FGA*T*K
Sbjct: 531 WRLIVHHVSAETLLL*GWRSSVMTVQLVVLVFTTQVFGA*T*K 659
Score = 22.6 bits (43), Expect(2) = 6e-079
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -2 / +3
Query: 596 GWWMHACMV 570
GWWMH ++
Sbjct: 165 GWWMHDTLI 191
>gb|CD232496.1|CD232496 SS1_45_A09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_45_A09_A012 5', mRNA sequence
Length = 531
Score = 254 bits (549), Expect(3) = 3e-074
Identities = 98/110 (89%), Positives = 107/110 (97%)
Frame = -1 / +1
Query: 405 DASPQLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSIIGDD 226
+A+PQLARKIP+TLFGIFFEEINHAGAGGIWAELV+NRGFEAGG HTPSNIDPWSIIGDD
Sbjct: 202 EATPQLARKIPETLFGIFFEEINHAGAGGIWAELVNNRGFEAGGPHTPSNIDPWSIIGDD 381
Query: 225 SSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGVGVYNPGFWGMNIEEGK 76
SS+F+ TDRTSCFSRNIVALRMEVLC++CP GGVGVYNPGFWGMNIE+GK
Sbjct: 382 SSIFMATDRTSCFSRNIVALRMEVLCNDCPAGGVGVYNPGFWGMNIEDGK 531
Score = 231 bits (499), Expect(2) = 2e-066
Identities = 98/117 (83%), Positives = 102/117 (87%)
Frame = +2 / -2
Query: 77 FPSSMFMPQNPGL*TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSM 256
FPSSMFMPQ PGL*TPTPP GQ QRTSILRATMFRLKHDVRSV+ N EESSPMMDHGSM
Sbjct: 530 FPSSMFMPQKPGL*TPTPPAGQSLQRTSILRATMFRLKHDVRSVAMNIEESSPMMDHGSM 351
Query: 257 FDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAVW 427
FDGV PPAS PLLLTSSAHMPPAPAWLISSK IPN+VSGIFRASCG AS ++ W
Sbjct: 350 FDGV*GPPASKPLLLTSSAHMPPAPAWLISSKNIPNNVSGIFRASCGVAS*GLLSGW 180
Score = 194 bits (419), Expect = 8e-049
Identities = 78/105 (74%), Positives = 82/105 (78%)
Frame = -3 / +3
Query: 397 AAACSEDP*YTVRDLL*GDQPCRGWWHMG*TC**QRV*SWRPPYSIKH*PMVHHWRRLLC 218
A AC EDP* + D+ *GD PCRG WHMG C *QR SWRP YSIKH*P+VHHWR LL
Sbjct: 210 ATACPEDP*NIIWDIF*GD*PCRGRWHMGRACQ*QRFRSWRPSYSIKH*PVVHHWR*LLY 389
Query: 217 ICGDRSYIMFQSKHRCSQDGGPLR*LSYWWCWCLQPRVLGHEHRR 83
I GD SYIMFQ KH CS+DGGPL *LS WWCWCLQPR LGHEHRR
Sbjct: 390 IHGD*SYIMFQPKHCCSEDGGPL**LSSWWCWCLQPRFLGHEHRR 524
Score = 192 bits (414), Expect = 4e-048
Identities = 78/110 (70%), Positives = 90/110 (81%)
Frame = +1 / -1
Query: 76 LSFFYVHAPKPWVVNTNTTSRTIIAKDLHPESNDVSTET*CTIGLHKYRGVVSNDGPWVN 255
L FYVHAPK WVVNTNTTS T+I +DLHP+SN+VS ET*CTI H+YRGV+SNDGP VN
Sbjct: 531 LPIFYVHAPKTWVVNTNTTSWTVITEDLHPQSNNVSAET*CTISRHEYRGVISNDGPRVN 352
Query: 256 V*WSMEASSFKPSVTNKFSPYATSPCMVDLLKEDPEQCIRDLPSKLRRGV 405
V*WSM ASSF+ SV +K PYAT PCMV+LLK+ P+ C RDLP KL RG+
Sbjct: 351 V*WSMRASSFETSVIDKLCPYATGPCMVNLLKKYPK*CFRDLPGKLWRGL 202
Score = 188 bits (405), Expect = 7e-047
Identities = 75/102 (73%), Positives = 86/102 (84%)
Frame = +3 / -3
Query: 84 LLCSCPKTLGCKHQHHQ*DNYRKGPPS*EQRCFD*NMMYDRSPQIQRSRLQ*WTMGQCLM 263
LLCSCPK LGCKHQHHQ D++ +GPPS EQ+CF *NMMYD+SP I RS LQ*WT GQCLM
Sbjct: 523 LLCSCPKNLGCKHQHHQLDSHYRGPPSSEQQCFG*NMMYDQSP*I*RSHLQ*WTTGQCLM 344
Query: 264 EYGGLQLQTLCY*QVQPICHQPLHG*SPQRRSRTVYQGSSEQ 389
EY GLQL+ LCY*Q PICH+PLHG*SPQ+ S+ ++QGSS Q
Sbjct: 343 EYEGLQLRNLCY*QALPICHRPLHG*SPQKISQIMFQGSSGQ 218
Score = 142 bits (304), Expect = 6e-033
Identities = 70/103 (67%), Positives = 73/103 (70%)
Frame = -2 / +2
Query: 392 SLLGRSLIHCSGSSLRRSTMQGLVAYGLNLLVTEGLKLEASILHQTLTHGPSLETTPLYL 213
SL GRSL H G LRR TMQG VAYG +L +TE KLEA ILHQTLT GPSLE TPLY
Sbjct: 215 SLPGRSLKHYLGYFLRRLTMQGPVAYGQSLSITEVSKLEALILHQTLTRGPSLEMTPLYS 394
Query: 212 WRPIVHHVSVETSLLSGWRSFAIIXXXXXXVFTTQGFGA*T*K 84
WR IVHHVS ET LL GWRS + VFTTQ FGA*T*K
Sbjct: 395 WRLIVHHVSAETLLL*GWRSSVMTVQLVVLVFTTQVFGA*T*K 523
Score = 42.3 bits (86), Expect(2) = 2e-066
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +2 / -1
Query: 413 RVAVWVASTSDARHLQPMQSRNKKRR 490
RVAVWVAS S RHLQP Q+R++ ++
Sbjct: 198 RVAVWVASISKGRHLQPTQNRSRTQK 121
Score = 42.3 bits (86), Expect(3) = 3e-074
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -1 / +2
Query: 480 LFLLCIGCKCLASEVEATQTATL 412
L L C+GC+C E+EATQTATL
Sbjct: 131 LLLFCVGCRCRPLEIEATQTATL 199
Score = 22.6 bits (43), Expect(3) = 3e-074
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -2 / +3
Query: 596 GWWMHACMV 570
GWWMH ++
Sbjct: 33 GWWMHDTLI 59
>gb|CX622776.1|CX622776 GABR1_65_H12.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_65_H12_A002 5', mRNA sequence
Length = 769
Score = 182 bits (392), Expect(2) = 1e-065
Identities = 74/89 (83%), Positives = 81/89 (91%)
Frame = -1 / +2
Query: 414 LAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSII 235
L+V+ASPQ ARKIPD +FGIFFEEINHAGAGG+WAELVSNRGFEAGG +TPSNIDPW II
Sbjct: 116 LSVNASPQNARKIPDKMFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWLII 295
Query: 234 GDDSSVFVETDRTSCFSRNIVALRMEVLC 148
GD+SS+ V TDRTSCF RN VALRMEVLC
Sbjct: 296 GDESSIIVGTDRTSCFERNPVALRMEVLC 382
Score = 146 bits (313), Expect(2) = 9e-050
Identities = 64/88 (72%), Positives = 70/88 (79%)
Frame = +2 / -2
Query: 146 SQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPP 325
+QRTSI AT R KHDVRSV T +SSPM+ HGS+ +GV PPASNPLLLTSSAH PP
Sbjct: 384 AQRTSIRSATGLRSKHDVRSVPTMILDSSPMISHGSILEGVLGPPASNPLLLTSSAHNPP 205
Query: 326 APAWLISSKKIPNSVSGIFRASCGEAST 409
APAWLISSKKIPN +SGIF A CGEA T
Sbjct: 204 APAWLISSKKIPNILSGIFLAFCGEAFT 121
Score = 89.0 bits (188), Expect(2) = 1e-065
Identities = 32/47 (68%), Positives = 41/47 (87%)
Frame = -1 / +2
Query: 141 CPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
CP+GGVGVYNPG+WGMNIE+GKVY + + ++S +T LTVSLTSS+G
Sbjct: 404 CPSGGVGVYNPGYWGMNIEKGKVYKVSLHIRSSDTVSLTVSLTSSDG 544
Score = 72.1 bits (151), Expect(2) = 9e-050
Identities = 34/47 (72%), Positives = 34/47 (72%)
Frame = +2 / -2
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQ 142
P ELV ETVK VS DL L*TFP SMFMPQ PGL*TPTPP GQ
Sbjct: 543 PSELVKETVKDTVSDDLICRLTL*TFPFSMFMPQ*PGL*TPTPPDGQ 403
>gb|BG556638.1|BG556638 EM1_37_G04.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 450
Score = 226 bits (487), Expect(2) = 8e-059
Identities = 90/105 (85%), Positives = 97/105 (92%)
Frame = -1 / +1
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L C+GC+C E+EATQTATL VDA+PQLARKIP+TLFGIFFEEINHAGAGGIWAELV
Sbjct: 136 LLLFCVGCRCRPLEIEATQTATLKVDATPQLARKIPETLFGIFFEEINHAGAGGIWAELV 315
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVAL 166
+NRGFEAGG HTPSNIDPWSIIGDDSS+FV TDRTSCFSRNIVAL
Sbjct: 316 NNRGFEAGGPHTPSNIDPWSIIGDDSSIFVATDRTSCFSRNIVAL 450
Score = 213 bits (459), Expect = 3e-054
Identities = 89/108 (82%), Positives = 96/108 (88%)
Frame = +2 / -2
Query: 167 RATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLIS 346
RATMFRLKHDVRSV+TN EESSPMMDHGSMFDGV PPAS PLLLTSSAHMPPAPAWLIS
Sbjct: 449 RATMFRLKHDVRSVATNIEESSPMMDHGSMFDGV*GPPASKPLLLTSSAHMPPAPAWLIS 270
Query: 347 SKKIPNSVSGIFRASCGEASTARVAVWVASTSDARHLQPMQSRNKKRR 490
SK IPN+VSGIFRASCG AST RVAVWVAS S RHLQP Q+R++ ++
Sbjct: 269 SKNIPNNVSGIFRASCGVASTLRVAVWVASISKGRHLQPTQNRSRTQK 126
Score = 144 bits (309), Expect = 1e-033
Identities = 63/103 (61%), Positives = 72/103 (69%)
Frame = +3 / -3
Query: 168 EQRCFD*NMMYDRSPQIQRSRLQ*WTMGQCLMEYGGLQLQTLCY*QVQPICHQPLHG*SP 347
EQ+CF *NMMYD+SP+I RS LQ*WT GQCLMEY GLQL+ LCY*Q PICH+PLHG*SP
Sbjct: 448 EQQCFG*NMMYDQSPRI*RSHLQ*WTTGQCLMEYEGLQLRNLCY*QALPICHRPLHG*SP 269
Query: 348 QRRSRTVYQGSSEQXXXXXXXXXXXXXWPLPLMPGICSLCRAE 476
Q+ S+ ++QGSS Q WPL L ICS R E
Sbjct: 268 QKISQIMFQGSSGQAVAWHQP*GLLSGWPLFLKADICSPHRIE 140
Score = 135 bits (289), Expect = 7e-031
Identities = 55/81 (67%), Positives = 66/81 (81%)
Frame = +1 / -1
Query: 166 ESNDVSTET*CTIGLHKYRGVVSNDGPWVNV*WSMEASSFKPSVTNKFSPYATSPCMVDL 345
+SN+VS ET*CTI H+YRGV+SNDGP VNV*WSM ASSF+ SV +K PYAT PCMV+L
Sbjct: 450 QSNNVSAET*CTISRHEYRGVISNDGPRVNV*WSMRASSFETSVIDKLCPYATGPCMVNL 271
Query: 346 LKEDPEQCIRDLPSKLRRGVH 408
LK+ P+ C RDLP KL RG++
Sbjct: 270 LKKYPK*CFRDLPGKLWRGIN 208
Score = 127 bits (273), Expect = 1e-028
Identities = 54/77 (70%), Positives = 57/77 (74%)
Frame = -3 / +3
Query: 397 AAACSEDP*YTVRDLL*GDQPCRGWWHMG*TC**QRV*SWRPPYSIKH*PMVHHWRRLLC 218
A AC EDP* + D+ *GD PCRG WHMG C *QR SWRP YSIKH*P+VHHWR LL
Sbjct: 219 ATACPEDP*NIIWDIF*GD*PCRGRWHMGRACQ*QRFRSWRPSYSIKH*PVVHHWR*LLY 398
Query: 217 ICGDRSYIMFQSKHRCS 167
I GD SYIMFQ KH CS
Sbjct: 399 IRGD*SYIMFQPKHCCS 449
Score = 115 bits (245), Expect = 8e-025
Identities = 54/75 (72%), Positives = 56/75 (74%)
Frame = -2 / +2
Query: 392 SLLGRSLIHCSGSSLRRSTMQGLVAYGLNLLVTEGLKLEASILHQTLTHGPSLETTPLYL 213
SL GRSL H G LRR TMQG VAYG +L +TE KLEA ILHQTLT GPSLE TPLY
Sbjct: 224 SLPGRSLKHYLGYFLRRLTMQGPVAYGQSLSITEVSKLEALILHQTLTRGPSLEMTPLYS 403
Query: 212 WRPIVHHVSVETSLL 168
WR IVHHVS ET LL
Sbjct: 404 WRLIVHHVSAETLLL 448
Score = 22.6 bits (43), Expect(2) = 8e-059
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -2 / +2
Query: 596 GWWMHACMV 570
GWWMH ++
Sbjct: 38 GWWMHDTLI 64
>gb|BI098360.1|BI098360 IP1_31_E11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 483
Score = 204 bits (440), Expect(3) = 2e-054
Identities = 81/98 (82%), Positives = 88/98 (89%)
Frame = -1 / +3
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L C+GC+C E+EATQTATL VDA+PQLARKIP+TLFGIFFEEINHAGAGGIWAELV
Sbjct: 162 LLLFCVGCRCRPLEIEATQTATLKVDATPQLARKIPETLFGIFFEEINHAGAGGIWAELV 341
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCF 187
+NRGFEAGG HTPSNIDPWSIIGDDSS+FV TDRT F
Sbjct: 342 NNRGFEAGGPHTPSNIDPWSIIGDDSSIFVATDRTIMF 455
Score = 188 bits (406), Expect(2) = 4e-049
Identities = 79/98 (80%), Positives = 86/98 (87%)
Frame = +2 / -3
Query: 197 VRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIPNSVSG 376
VRSV+TN EESSPMMDHGSMFDGV PPAS PLLLTSSAHMPPAPAWLISSK IPN+VSG
Sbjct: 445 VRSVATNIEESSPMMDHGSMFDGV*GPPASKPLLLTSSAHMPPAPAWLISSKNIPNNVSG 266
Query: 377 IFRASCGEASTARVAVWVASTSDARHLQPMQSRNKKRR 490
IFRASCG AST RVAVWVAS S RHLQP Q+R++ ++
Sbjct: 265 IFRASCGVASTLRVAVWVASISKGRHLQPTQNRSRTQK 152
Score = 125 bits (267), Expect(2) = 1e-028
Identities = 55/93 (59%), Positives = 63/93 (67%)
Frame = +3 / -1
Query: 198 YDRSPQIQRSRLQ*WTMGQCLMEYGGLQLQTLCY*QVQPICHQPLHG*SPQRRSRTVYQG 377
YD+SP+I RS LQ*WT GQCLMEY GLQL+ LCY*Q PICH+PLHG*SPQ+ S+ ++QG
Sbjct: 444 YDQSPRI*RSHLQ*WTTGQCLMEYEGLQLRNLCY*QALPICHRPLHG*SPQKISQIMFQG 265
Query: 378 SSEQXXXXXXXXXXXXXWPLPLMPGICSLCRAE 476
SS Q WPL L ICS R E
Sbjct: 264 SSGQAVAWHQP*GLLSGWPLFLKADICSPHRIE 166
Score = 116 bits (248), Expect = 3e-025
Identities = 47/70 (67%), Positives = 56/70 (80%)
Frame = +1 / -2
Query: 199 TIGLHKYRGVVSNDGPWVNV*WSMEASSFKPSVTNKFSPYATSPCMVDLLKEDPEQCIRD 378
TI H+YRGV+SNDGP VNV*WSM ASSF+ SV +K PYAT PCMV+LLK+ P+ C RD
Sbjct: 443 TISRHEYRGVISNDGPRVNV*WSMRASSFETSVIDKLCPYATGPCMVNLLKKYPK*CFRD 264
Query: 379 LPSKLRRGVH 408
LP KL RG++
Sbjct: 263 LPGKLWRGIN 234
Score = 108 bits (231), Expect(2) = 1e-023
Identities = 46/67 (68%), Positives = 49/67 (73%)
Frame = -3 / +2
Query: 397 AAACSEDP*YTVRDLL*GDQPCRGWWHMG*TC**QRV*SWRPPYSIKH*PMVHHWRRLLC 218
A AC EDP* + D+ *GD PCRG WHMG C *QR SWRP YSIKH*P+VHHWR LL
Sbjct: 245 ATACPEDP*NIIWDIF*GD*PCRGRWHMGRACQ*QRFRSWRPSYSIKH*PVVHHWR*LLY 424
Query: 217 ICGDRSY 197
I GD SY
Sbjct: 425 IRGD*SY 445
Score = 27.2 bits (53), Expect(2) = 4e-049
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2 / -2
Query: 167 RATMFRLKHD 196
RATMFRLKHD
Sbjct: 476 RATMFRLKHD 447
Score = 25.8 bits (50), Expect(3) = 2e-054
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / +1
Query: 195 SCFSRNIVAL 166
SCFSRNIVAL
Sbjct: 448 SCFSRNIVAL 477
Score = 22.6 bits (43), Expect(3) = 2e-054
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -2 / +1
Query: 596 GWWMHACMV 570
GWWMH ++
Sbjct: 64 GWWMHDTLI 90
Score = 22.1 bits (42), Expect(2) = 1e-023
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3 / +3
Query: 196 IMFQSKHRCS 167
IMFQ KH CS
Sbjct: 447 IMFQPKHCCS 476
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / -3
Query: 168 EQRCFD*NMM 197
EQ+CF *NMM
Sbjct: 475 EQQCFG*NMM 446
>gb|CD231662.1|CD231662 SS1_22_F04.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_22_F04_A012 5', mRNA sequence
Length = 720
Score = 178 bits (384), Expect(3) = 3e-054
Identities = 70/83 (84%), Positives = 76/83 (91%)
Frame = -1 / +3
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L C+GC+C E+EATQTATL VDA+PQLARKIP+TLFGIFFEEINHAGAGGIWAELV
Sbjct: 408 LLLFCVGCRCRPLEIEATQTATLKVDATPQLARKIPETLFGIFFEEINHAGAGGIWAELV 587
Query: 300 SNRGFEAGGLHTPSNIDPWSIIG 232
+NRGFEAGG HTPSNIDPWSIIG
Sbjct: 588 NNRGFEAGGPHTPSNIDPWSIIG 656
Score = 167 bits (360), Expect(2) = 2e-048
Identities = 69/86 (80%), Positives = 75/86 (87%)
Frame = +2 / -3
Query: 233 PMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTA 412
PMMDHGSMFDGV PPAS PLLLTSSAHMPPAPAWLISSK IPN+VSGIFRASCG AST
Sbjct: 655 PMMDHGSMFDGV*GPPASKPLLLTSSAHMPPAPAWLISSKNIPNNVSGIFRASCGVASTL 476
Query: 413 RVAVWVASTSDARHLQPMQSRNKKRR 490
RVAVWVAS S RHLQP Q+R++ ++
Sbjct: 475 RVAVWVASISKGRHLQPTQNRSRTQK 398
Score = 107 bits (228), Expect(2) = 5e-029
Identities = 47/81 (58%), Positives = 53/81 (65%)
Frame = +3 / -1
Query: 234 Q*WTMGQCLMEYGGLQLQTLCY*QVQPICHQPLHG*SPQRRSRTVYQGSSEQXXXXXXXX 413
Q*WT GQCLMEY GLQL+ LCY*Q PICH+PLHG*SPQ+ S+ ++QGSS Q
Sbjct: 654 Q*WTTGQCLMEYEGLQLRNLCY*QALPICHRPLHG*SPQKISQIMFQGSSGQAVAWHQP* 475
Query: 414 XXXXXWPLPLMPGICSLCRAE 476
WPL L ICS R E
Sbjct: 474 GLLSGWPLFLKADICSPHRIE 412
Score = 96.4 bits (204), Expect(2) = 2e-025
Identities = 38/55 (69%), Positives = 41/55 (74%)
Frame = -3 / +2
Query: 397 AAACSEDP*YTVRDLL*GDQPCRGWWHMG*TC**QRV*SWRPPYSIKH*PMVHHW 233
A AC EDP* + D+ *GD PCRG WHMG C *QR SWRP YSIKH*P+VHHW
Sbjct: 491 ATACPEDP*NIIWDIF*GD*PCRGRWHMGRACQ*QRFRSWRPSYSIKH*PVVHHW 655
Score = 95.9 bits (203), Expect(2) = 8e-024
Identities = 39/58 (67%), Positives = 46/58 (79%)
Frame = +1 / -2
Query: 235 NDGPWVNV*WSMEASSFKPSVTNKFSPYATSPCMVDLLKEDPEQCIRDLPSKLRRGVH 408
NDGP VNV*WSM ASSF+ SV +K PYAT PCMV+LLK+ P+ C RDLP KL RG++
Sbjct: 653 NDGPRVNV*WSMRASSFETSVIDKLCPYATGPCMVNLLKKYPK*CFRDLPGKLWRGIN 480
Score = 50.6 bits (104), Expect(3) = 3e-054
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = -1 / +1
Query: 237 IGDDSSVFVETDRTSCFSRNIVA 169
+GDDSS+F+ TDRTSCFSRNIVA
Sbjct: 652 LGDDSSIFMATDRTSCFSRNIVA 720
Score = 46.4 bits (95), Expect(2) = 2e-048
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +2 / -2
Query: 170 ATMFRLKHDVRSVSTNTEESSP 235
ATMFRLKHDVRSV+ N EESSP
Sbjct: 719 ATMFRLKHDVRSVAMNIEESSP 654
Score = 41.4 bits (84), Expect(2) = 5e-029
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1 / -1
Query: 169 SNDVSTET*CTIGLHKYRGVVS 234
SN+VS ET*CTI H+YRGV+S
Sbjct: 720 SNNVSAET*CTISRHEYRGVIS 655
Score = 40.5 bits (82), Expect(2) = 2e-025
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = -2 / +2
Query: 233 ETTPLYLWRPIVHHVSVETSL 171
E TPLY WR IVHHVS ET L
Sbjct: 656 EMTPLYSWRLIVHHVSAETLL 718
Score = 35.4 bits (71), Expect(2) = 8e-024
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3 / -3
Query: 171 QRCFD*NMMYDRSPQIQRSRL 233
Q+CF *NMMYD+SP I RS L
Sbjct: 718 QQCFG*NMMYDQSP*I*RSHL 656
Score = 22.6 bits (43), Expect(3) = 3e-054
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -2 / +1
Query: 596 GWWMHACMV 570
GWWMH ++
Sbjct: 310 GWWMHDTLI 336
>gb|CW469202.1|CW469202 fsbb001f221m21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f221m21, DNA
sequence
Length = 709
Score = 168 bits (362), Expect(3) = 1e-052
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = -1 / -3
Query: 291 GFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGVGVYN 112
GFEAGGLHTPSNIDPWSIIGDDSS++VETDRTSCFSRNI+ALRMEVLCDNCPTGGVG+YN
Sbjct: 281 GFEAGGLHTPSNIDPWSIIGDDSSIYVETDRTSCFSRNIIALRMEVLCDNCPTGGVGIYN 102
Query: 111 PGFWGM 94
PGFWGM
Sbjct: 101 PGFWGM 84
Score = 154 bits (331), Expect(3) = 8e-048
Identities = 64/73 (87%), Positives = 65/73 (89%)
Frame = +2 / +1
Query: 74 TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGS 253
T+ S MPQNPGL* PTPPVGQLSQRTSILRA MFRLKHDVRSVST EESSPMMDHGS
Sbjct: 64 TYDKSRTMPQNPGL*IPTPPVGQLSQRTSILRAMMFRLKHDVRSVSTYIEESSPMMDHGS 243
Query: 254 MFDGVWRPPASNP 292
MFDGVWRPPASNP
Sbjct: 244 MFDGVWRPPASNP 282
Score = 152 bits (326), Expect(3) = 2e-045
Identities = 58/66 (87%), Positives = 59/66 (89%)
Frame = -3 / -2
Query: 292 RV*SWRPPYSIKH*PMVHHWRRLLCICGDRSYIMFQSKHRCSQDGGPLR*LSYWWCWCLQ 113
RV*SWRPPYSIKH*PMVHHWR L ICGD S IMFQSKH CS+DGGPLR*LSYWWCW LQ
Sbjct: 282 RV*SWRPPYSIKH*PMVHHWR*LFYICGD*SDIMFQSKHHCSEDGGPLR*LSYWWCWYLQ 103
Query: 112 PRVLGH 95
PRVLGH
Sbjct: 102 PRVLGH 85
Score = 152 bits (326), Expect(2) = 2e-037
Identities = 61/76 (80%), Positives = 66/76 (86%)
Frame = +1 / +3
Query: 94 HAPKPWVVNTNTTSRTIIAKDLHPESNDVSTET*CTIGLHKYRGVVSNDGPWVNV*WSME 273
HAP+PWVVNTNTTSRT+IAKDLHP+SNDVSTET*C I LH YR V+SNDGPWVNV*WSME
Sbjct: 84 HAPEPWVVNTNTTSRTVIAKDLHPQSNDVSTET*CPISLHIYRRVISNDGPWVNV*WSME 263
Query: 274 ASSFKPSVTNKFSPYA 321
ASSFKP N + YA
Sbjct: 264 ASSFKPCSINADAVYA 311
Score = 139 bits (299), Expect(2) = 2e-032
Identities = 57/78 (73%), Positives = 65/78 (83%)
Frame = +3 / +2
Query: 96 CPKTLGCKHQHHQ*DNYRKGPPS*EQRCFD*NMMYDRSPQIQRSRLQ*WTMGQCLMEYGG 275
CP+TLGCK+QHHQ*D+YRKGPPS EQ CFD*NMM D+SP I +S LQ*WTMGQCLMEYGG
Sbjct: 86 CPRTLGCKYQHHQ*DSYRKGPPSSEQ*CFD*NMMSDQSPHI*KSHLQ*WTMGQCLMEYGG 265
Query: 276 LQLQTLCY*QVQPICHQP 329
LQLQTL + + +C P
Sbjct: 266 LQLQTLQHKCRRCLCINP 319
Score = 114 bits (244), Expect(2) = 1e-030
Identities = 51/66 (77%), Positives = 53/66 (80%)
Frame = -2 / -1
Query: 293 EGLKLEASILHQTLTHGPSLETTPLYLWRPIVHHVSVETSLLSGWRSFAIIXXXXXXVFT 114
+GLKLEASILHQTLTHGPSLE T LY+WR I HHVSVETSLL GWRSFAI VFT
Sbjct: 283 QGLKLEASILHQTLTHGPSLEMTLLYMWRLIGHHVSVETSLL*GWRSFAITVLLVVLVFT 104
Query: 113 TQGFGA 96
TQG GA
Sbjct: 103 TQGSGA 86
Score = 51.5 bits (106), Expect(3) = 8e-048
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +2 / +2
Query: 281 ASNPLLLTSSAHMPPAPAWLIS 346
A +PLLLTSSAHMPPAPAWLIS
Sbjct: 464 AESPLLLTSSAHMPPAPAWLIS 529
Score = 51.5 bits (106), Expect(3) = 1e-052
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -3 / -1
Query: 346 GDQPCRGWWHMG*TC**QR 290
GDQPCR WWHMG*TC**QR
Sbjct: 529 GDQPCRSWWHMG*TC**QR 473
Score = 50.1 bits (103), Expect(3) = 2e-045
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -1 / -2
Query: 345 EINHAGAGGIWAELVSNRGFEA 280
EINHAGAGGIWAELVSNRG A
Sbjct: 528 EINHAGAGGIWAELVSNRGDSA 463
Score = 41.4 bits (84), Expect(2) = 1e-030
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2 / -3
Query: 347 RRSTMQGLVAYGLNLLVTE 291
RRSTMQ LVAYGLNLLVTE
Sbjct: 530 RRSTMQELVAYGLNLLVTE 474
Score = 28.6 bits (56), Expect(3) = 1e-052
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / -2
Query: 390 LARKIPDTLFGIFFE 346
L + PDTLFGIFFE
Sbjct: 708 LLGRSPDTLFGIFFE 664
Score = 26.7 bits (52), Expect(3) = 8e-048
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 342 SPQRRSRTVYQG 377
SPQRRS+ VYQG
Sbjct: 660 SPQRRSQIVYQG 695
Score = 26.7 bits (52), Expect(2) = 2e-037
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2 / +2
Query: 341 ISSKKIPNSVSG 376
++SKKIPNSVSG
Sbjct: 659 LTSKKIPNSVSG 694
Score = 22.6 bits (43), Expect(3) = 2e-045
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / -1
Query: 376 P*YTVRDLL*GD 341
P*YT+ DLL*G+
Sbjct: 694 P*YTIWDLL*GE 659
Score = 22.1 bits (42), Expect(2) = 2e-032
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 346 LKEDPEQCIR 375
LKEDP+ CIR
Sbjct: 664 LKEDPK*CIR 693
>gb|AC169378.1| Sorghum bicolor clone SB_BBc0007L02, WORKING DRAFT SEQUENCE, 2
unordered pieces
Length = 138609
Score = 145 bits (311), Expect(4) = 2e-051
Identities = 53/72 (73%), Positives = 64/72 (88%)
Frame = -1 / -3
Query: 309 ELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTG 130
+++ GFEAGG +TPSNIDPW+IIGD+SS++V T+ SCF+RNIVALRMEVLCDNC TG
Sbjct: 14191 DIIYPLGFEAGGPYTPSNIDPWNIIGDESSIYVTTEAASCFTRNIVALRMEVLCDNCRTG 14012
Query: 129 GVGVYNPGFWGM 94
GVG+YNPGFWGM
Sbjct: 14011 GVGIYNPGFWGM 13976
Score = 110 bits (235), Expect(4) = 2e-033
Identities = 48/66 (72%), Positives = 53/66 (80%)
Frame = +2 / +3
Query: 95 MPQNPGL*TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWR 274
MPQNPGL* PTPPV QLSQRTSILRAT+F +K + SV T E+SSPMM HGSMF+GV
Sbjct: 13977 MPQNPGL*MPTPPVRQLSQRTSILRATIFLVKQEAASVVTYMEDSSPMMFHGSMFEGV*G 14156
Query: 275 PPASNP 292
PPAS P
Sbjct: 14157 PPASKP 14174
Score = 48.7 bits (100), Expect(4) = 2e-051
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -1 / -2
Query: 93 NIEEGKVYNLVMFVKSPETTDLTVSLTSS 7
NIEEGK YNLVM+V+S E+ +LT SLT S
Sbjct: 13610 NIEEGKTYNLVMYVRSLESVELTASLTCS 13524
Score = 47.3 bits (97), Expect(4) = 2e-051
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -1 / -1
Query: 345 EINHAGAGGIWAELVSNRG 289
EINHAGAGGIW ELVSNRG
Sbjct: 14712 EINHAGAGGIWEELVSNRG 14656
Score = 44.1 bits (90), Expect(4) = 2e-051
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = -1 / -3
Query: 447 ASEVEATQTATLAVDASPQLARKIPDTLFGIFFE 346
A+E TQ+ATL VD S R+IP TLFG+FFE
Sbjct: 15322 ATEPGCTQSATLDVDVSWCFRREIPKTLFGLFFE 15221
Score = 44.1 bits (90), Expect(4) = 2e-033
Identities = 21/30 (70%), Positives = 22/30 (73%)
Frame = +2 / +1
Query: 5 LELVSETVKSVVSGDLTNITRL*TFPSSMF 94
LE VSE V S S DLT +TRL* FPSSMF
Sbjct: 13522 LEQVSEAVNSTDSSDLTYMTRL*VFPSSMF 13611
Score = 42.3 bits (86), Expect(4) = 2e-033
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2 / +2
Query: 290 PLLLTSSAHMPPAPAWLIS 346
PLLLTSS+ +PPAPAWLIS
Sbjct: 14657 PLLLTSSSQIPPAPAWLIS 14713
Score = 27.2 bits (53), Expect(4) = 2e-033
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2 / +3
Query: 341 ISSKKIPNSVSGIFRASCGEASTARVA 421
++SKK PN+V GI E ST+ VA
Sbjct: 15216 LTSKKSPNNVLGISLRKHQETSTSSVA 15296
>gb|BG488202.1|BG488202 RHIZ2_60_G05.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 554
Score = 155 bits (333), Expect(4) = 4e-049
Identities = 63/69 (91%), Positives = 66/69 (95%)
Frame = -1 / +3
Query: 492 LLRFLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 313
+L FLFL C+GCKCLASE+EATQTATL VDASPQLARKIPDTLFGIFFEEINHAGAGGIW
Sbjct: 348 ILCFLFLFCLGCKCLASELEATQTATLTVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 527
Query: 312 AELVSNRGF 286
AELVSNRGF
Sbjct: 528 AELVSNRGF 554
Score = 151 bits (325), Expect(3) = 5e-045
Identities = 64/77 (83%), Positives = 68/77 (88%)
Frame = +2 / -2
Query: 290 PLLLTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARHLQPMQ 469
PLLLTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEAST RVAVWVAS SDARHLQP Q
Sbjct: 550 PLLLTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTVRVAVWVASNSDARHLQPKQ 371
Query: 470 SRNKKRRRTARGAASLL 520
+RNKK+R A+ L+
Sbjct: 370 NRNKKQRMARGAASLLV 320
Score = 105 bits (225), Expect(3) = 6e-031
Identities = 46/69 (66%), Positives = 48/69 (69%)
Frame = +3 / -3
Query: 291 LCY*QVQPICHQPLHG*SPQRRSRTVYQGSSEQXXXXXXXXXXXXXWPLPLMPGICSLCR 470
LCY*QVQPICHQ LHG*SPQRRS+ VYQGSSEQ WP LMPGICSL +
Sbjct: 549 LCY*QVQPICHQLLHG*SPQRRSQIVYQGSSEQAAARHRP*GSPSGWPPTLMPGICSLSK 370
Query: 471 AETRSGGGR 497
ETRS G R
Sbjct: 369 TETRSRGWR 343
Score = 86.8 bits (183), Expect(3) = 2e-026
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +1 / -1
Query: 286 KPSVTNKFSPYATSPCMVDLLKEDPEQCIRDLPSKLRRGV 405
K SVTNKFSPYATS CMVDLLKEDP+ CIRDLPSKLRRG+
Sbjct: 554 KTSVTNKFSPYATSSCMVDLLKEDPK*CIRDLPSKLRRGI 435
Score = 85.8 bits (181), Expect(3) = 2e-028
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = -3 / +2
Query: 400 LAAACSEDP*YTVRDLL*GDQPCRGWWHMG*TC**QR 290
LAAACSEDP*YT+ DLL*GDQPCR WWHMG*TC**QR
Sbjct: 440 LAAACSEDP*YTIWDLL*GDQPCRSWWHMG*TC**QR 550
Score = 47.8 bits (98), Expect(3) = 2e-028
Identities = 22/52 (42%), Positives = 26/52 (50%)
Frame = -1 / +3
Query: 567 HAGPTRVDKWKRMGITSNDAAPRAVLLRFLFLLCIGCKCLASEVEATQTATL 412
H G TRVDKWKRMG + + A + FLF L C E T T T+
Sbjct: 279 HTGSTRVDKWKRMGTSKDAAPRAILCFLFLFCLGCKCLASELEATQTATLTV 434
Score = 40.5 bits (82), Expect(3) = 2e-026
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +2 / -2
Query: 473 RNKKRRRTARGAASLLVIPIRFHLSTLVGPAC 568
+N+ +++ A+ L++P+RFHLSTLV P C
Sbjct: 373 QNRNKKQRMARGAASLLVPMRFHLSTLVEPVC 278
Score = 39.1 bits (79), Expect(4) = 4e-049
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2 / +1
Query: 575 MVDTPAQPELTSGSVWV 525
M DTPAQPELTSGS WV
Sbjct: 271 MHDTPAQPELTSGSAWV 321
Score = 36.3 bits (73), Expect(3) = 5e-045
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +1 / -1
Query: 514 VAGNTHTLPLVNSGWAGVSTMH 579
V TH LPLVNSG AGVS +H
Sbjct: 332 VLAGTHALPLVNSG*AGVSCIH 267
Score = 35.4 bits (71), Expect(3) = 6e-031
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3 / -3
Query: 525 YPYASTCQLWLGRRVYH 575
YP ASTCQLWL R V H
Sbjct: 321 YPCASTCQLWLSRCVMH 271
Score = 34.1 bits (68), Expect(4) = 4e-049
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -2 / +1
Query: 614 ELASSFGWWMH 582
ELASSFGWWMH
Sbjct: 244 ELASSFGWWMH 276
Score = 32.7 bits (65), Expect(3) = 5e-045
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1 / -1
Query: 580 ACIHHPKEDASS 615
+CIHHPKEDASS
Sbjct: 278 SCIHHPKEDASS 243
Score = 31.8 bits (63), Expect(3) = 6e-031
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +2 / -2
Query: 572 PCMHASTIRRKTRAPVCGRRGR 637
P HASTIRRK RAP +GR
Sbjct: 286 PVCHASTIRRKMRAPRLRVQGR 221
Score = 31.3 bits (62), Expect(3) = 2e-028
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3 / +2
Query: 634 AASTADGSSRLPSDGGCM 581
A + GSS LPSDGGCM
Sbjct: 224 ALHSQPGSSHLPSDGGCM 277
Score = 30.4 bits (60), Expect(3) = 2e-026
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / -3
Query: 582 MHPPSEGRRELP 617
MHPPSEGR ELP
Sbjct: 276 MHPPSEGRCELP 241
Score = 24.0 bits (46), Expect(4) = 4e-049
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / +3
Query: 522 TSNDAAPRAVL 490
TS DAAPRA+L
Sbjct: 321 TSKDAAPRAIL 353
>gb|CW262291.1|CW262291 104_729_11229977_116_35209_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229977, DNA
sequence
Length = 616
Score = 158 bits (339), Expect(2) = 8e-047
Identities = 60/66 (90%), Positives = 63/66 (95%)
Frame = -1 / -3
Query: 291 GFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGVGVYN 112
GFEAGG HTPSNIDPWSIIGDDSS+FV TDRTSCFSRNIVALRMEVLC++CP GGVGVYN
Sbjct: 584 GFEAGGPHTPSNIDPWSIIGDDSSIFVATDRTSCFSRNIVALRMEVLCNDCPAGGVGVYN 405
Query: 111 PGFWGM 94
PGFWGM
Sbjct: 404 PGFWGM 387
Score = 135 bits (290), Expect(2) = 4e-039
Identities = 57/66 (86%), Positives = 58/66 (87%)
Frame = +2 / +1
Query: 95 MPQNPGL*TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWR 274
MPQ PGL*TPTPP GQ QRTSILRATMFRLKHDVRSV+TN EESSPMMDHGSMFDGV
Sbjct: 388 MPQKPGL*TPTPPAGQSLQRTSILRATMFRLKHDVRSVATNIEESSPMMDHGSMFDGV*G 567
Query: 275 PPASNP 292
PPAS P
Sbjct: 568 PPASKP 585
Score = 133 bits (286), Expect(2) = 1e-036
Identities = 51/63 (80%), Positives = 53/63 (84%)
Frame = -3 / -2
Query: 283 SWRPPYSIKH*PMVHHWRRLLCICGDRSYIMFQSKHRCSQDGGPLR*LSYWWCWCLQPRV 104
SWRP YSIKH*P+VHHWR LL I GD SYIMFQ KH CS+DGGPL *LS WWCWCLQPR
Sbjct: 576 SWRPSYSIKH*PVVHHWR*LLYIRGD*SYIMFQPKHCCSEDGGPL**LSSWWCWCLQPRF 397
Query: 103 LGH 95
LGH
Sbjct: 396 LGH 388
Score = 126 bits (270), Expect(2) = 3e-032
Identities = 50/65 (76%), Positives = 57/65 (87%)
Frame = +1 / +3
Query: 94 HAPKPWVVNTNTTSRTIIAKDLHPESNDVSTET*CTIGLHKYRGVVSNDGPWVNV*WSME 273
HAPK WVVNTNTTS T+I +DLHP+SN+VS ET*CTI H+YRGV+SNDGP VNV*WSM
Sbjct: 387 HAPKTWVVNTNTTSWTVITEDLHPQSNNVSAET*CTISRHEYRGVISNDGPRVNV*WSMR 566
Query: 274 ASSFK 288
ASSF+
Sbjct: 567 ASSFE 581
Score = 126 bits (269), Expect(2) = 2e-031
Identities = 49/66 (74%), Positives = 56/66 (84%)
Frame = +3 / +2
Query: 96 CPKTLGCKHQHHQ*DNYRKGPPS*EQRCFD*NMMYDRSPQIQRSRLQ*WTMGQCLMEYGG 275
CPK LGCKHQHHQ D++ +GPPS EQ+CF *NMMYD+SP+I RS LQ*WT GQCLMEY G
Sbjct: 389 CPKNLGCKHQHHQLDSHYRGPPSSEQQCFG*NMMYDQSPRI*RSHLQ*WTTGQCLMEYEG 568
Query: 276 LQLQTL 293
LQL+ L
Sbjct: 569 LQLRNL 586
Score = 96.8 bits (205), Expect(2) = 7e-022
Identities = 44/63 (69%), Positives = 45/63 (71%)
Frame = -2 / -1
Query: 284 KLEASILHQTLTHGPSLETTPLYLWRPIVHHVSVETSLLSGWRSFAIIXXXXXXVFTTQG 105
KLEA ILHQTLT GPSLE TPLY WR IVHHVS ET LL GWRS + VFTTQ
Sbjct: 577 KLEALILHQTLTRGPSLEMTPLYSWRLIVHHVSAETLLL*GWRSSVMTVQLVVLVFTTQV 398
Query: 104 FGA 96
FGA
Sbjct: 397 FGA 389
Score = 51.9 bits (107), Expect(2) = 8e-047
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = -1 / -3
Query: 93 NIEEGKVYNLVMFVKSPETTDLT 25
NIE+GK YNLVM+VKSPETTDLT
Sbjct: 71 NIEDGKAYNLVMYVKSPETTDLT 3
Score = 48.7 bits (100), Expect(2) = 4e-039
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +2 / +1
Query: 23 TVKSVVSGDLTNITRL*TFPSSMF 94
TVKSVVSGDLT ITRL* FPSSMF
Sbjct: 1 TVKSVVSGDLTYITRL*AFPSSMF 72
Score = 42.3 bits (86), Expect(2) = 1e-036
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = -3 / -2
Query: 94 EHRRRKGLQSCYVC*VTRNN*LDS 23
EHRR +GLQSCYVC*V+ NN +S
Sbjct: 72 EHRRWEGLQSCYVC*VSGNNGFNS 1
Score = 34.5 bits (69), Expect(2) = 3e-032
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +1 / +3
Query: 25 CQVSCFW*LNKHNKIVDLSFFYV 93
C + CF LN HNKIV L FYV
Sbjct: 3 C*IRCFRRLNIHNKIVSLPIFYV 71
Score = 32.2 bits (64), Expect(2) = 2e-031
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3 / +2
Query: 24 LSSQLFLVT*QT*QDCRPFLLLCS 95
L + LF T* T*QDC+P LLCS
Sbjct: 2 LLNPLFPET*HT*QDCKPSHLLCS 73
Score = 29.5 bits (58), Expect(2) = 7e-022
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -2 / -1
Query: 92 T*KKERSTILLCLLSHQKQLT*Q 24
T*K R TILLC+LS +KQ *Q
Sbjct: 70 T*KMGRLTILLCMLSLRKQRI*Q 2
>gb|BI351404.1|BI351404 IP1_71_B10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 378
Score = 118 bits (252), Expect(2) = 2e-045
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = -1 / +2
Query: 324 GGIWAELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLC 148
GG+WAELVSNRGFEAGG +TPSNIDPW IIGD+S++ V TDR+SCF+ N +ALRMEVLC
Sbjct: 8 GGLWAELVSNRGFEAGGSNTPSNIDPWLIIGDESNIIVATDRSSCFASNPIALRMEVLC 184
Score = 85.8 bits (181), Expect(2) = 2e-045
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = -1 / +2
Query: 141 CPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
CP+GGVG+YNPG+WGMNIE KVY + M ++S E+ LTVSLTSS+G
Sbjct: 206 CPSGGVGIYNPGYWGMNIERTKVYRVTMHIRSSESVKLTVSLTSSDG 346
Score = 82.2 bits (173), Expect(2) = 2e-027
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = +2 / -1
Query: 149 QRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPA 328
Q TSI A K D RSV+T +SSPM++HGSMF+GV PPAS PLLLTSSAH PP+
Sbjct: 183 QSTSIRSAIGLLAKQDDRSVATIILDSSPMINHGSMFEGVLEPPASKPLLLTSSAHNPPS 4
Score = 61.1 bits (127), Expect(2) = 2e-027
Identities = 30/47 (63%), Positives = 31/47 (65%)
Frame = +2 / -1
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQ 142
P ELV ETV S DL + L*TF SMFMPQ PGL* PTPP GQ
Sbjct: 345 PSELVKETVSFTDSDDLMCMVTL*TFVLSMFMPQ*PGL*IPTPPDGQ 205
>gb|BG273563.1|BG273563 OV2_27_C04.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 304
Score = 141 bits (303), Expect(3) = 2e-040
Identities = 59/70 (84%), Positives = 62/70 (88%)
Frame = +2 / -1
Query: 302 TSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARHLQPMQSRNK 481
TSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEAST RVAVWVAS SDARHLQP Q+RNK
Sbjct: 304 TSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTVRVAVWVASNSDARHLQPKQNRNK 125
Query: 482 KRRRTARGAA 511
K+R A+
Sbjct: 124 KQRMARGAAS 95
Score = 141 bits (302), Expect(4) = 3e-043
Identities = 57/63 (90%), Positives = 60/63 (95%)
Frame = -1 / +3
Query: 492 LLRFLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 313
+L FLFL C+GCKCLASE+EATQTATL VDASPQLARKIPDTLFGIFFEEINHAGAGGIW
Sbjct: 114 ILCFLFLFCLGCKCLASELEATQTATLTVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 293
Query: 312 AEL 304
AEL
Sbjct: 294 AEL 302
Score = 97.7 bits (207), Expect(3) = 9e-027
Identities = 43/65 (66%), Positives = 44/65 (67%)
Frame = +3 / -2
Query: 303 QVQPICHQPLHG*SPQRRSRTVYQGSSEQXXXXXXXXXXXXXWPLPLMPGICSLCRAETR 482
QVQPICHQ LHG*SPQRRS+ VYQGSSEQ WP LMPGICSL R ETR
Sbjct: 303 QVQPICHQLLHG*SPQRRSQIVYQGSSEQAAARHRP*GSPSGWPPTLMPGICSLSRTETR 124
Query: 483 SGGGR 497
S G R
Sbjct: 123 SRGWR 109
Score = 80.3 bits (169), Expect(3) = 1e-024
Identities = 30/33 (90%), Positives = 31/33 (93%)
Frame = -3 / +2
Query: 400 LAAACSEDP*YTVRDLL*GDQPCRGWWHMG*TC 302
LAAACSEDP*YT+ DLL*GDQPCR WWHMG*TC
Sbjct: 206 LAAACSEDP*YTIWDLL*GDQPCRSWWHMG*TC 304
Score = 76.2 bits (160), Expect(3) = 6e-021
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +1 / -3
Query: 304 KFSPYATSPCMVDLLKEDPEQCIRDLPSKLRRGV 405
KFSPYATS CMVDLLKEDP+ CIRDLPSKLRRG+
Sbjct: 302 KFSPYATSSCMVDLLKEDPK*CIRDLPSKLRRGI 201
Score = 37.3 bits (75), Expect(3) = 1e-024
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = -1 / +3
Query: 555 TRVDKWKRMGITSNDAAPRAVLLRFLFLLCIGCKCLASEVEATQTATL 412
TRVDKWK MG + A + FLF L C E T T T+
Sbjct: 57 TRVDKWKPMGTGKDAAPRAILCFLFLFCLGCKCLASELEATQTATLTV 200
Score = 35.9 bits (72), Expect(4) = 3e-043
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2 / +1
Query: 614 ELASSFGWWMHA 579
ELASSFGWWMHA
Sbjct: 19 ELASSFGWWMHA 54
Score = 34.1 bits (68), Expect(3) = 9e-027
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / -2
Query: 582 MHPPSEGRRELP 617
MHPPSEGRRELP
Sbjct: 51 MHPPSEGRRELP 16
Score = 34.1 bits (68), Expect(3) = 2e-040
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1 / -3
Query: 580 ACIHHPKEDASS 615
ACIHHPKEDASS
Sbjct: 53 ACIHHPKEDASS 18
Score = 33.1 bits (66), Expect(3) = 1e-024
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -3 / +2
Query: 616 GSSRLPSDGGCM 581
GSSRLPSDGGCM
Sbjct: 17 GSSRLPSDGGCM 52
Score = 30.9 bits (61), Expect(3) = 6e-021
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2 / -1
Query: 581 HASTIRRKTRAP 616
HASTIRRKTRAP
Sbjct: 52 HASTIRRKTRAP 17
Score = 30.9 bits (61), Expect(3) = 6e-021
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2 / -1
Query: 473 RNKKRRRTARGAASLLVIPIRFHLSTLV 556
+N+ +++ A+ L +PI FHLSTLV
Sbjct: 139 QNRNKKQRMARGAASLPVPIGFHLSTLV 56
Score = 30.4 bits (60), Expect(4) = 3e-043
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -2 / +1
Query: 560 AQPELTSGSVWV 525
AQPELTSGS+WV
Sbjct: 52 AQPELTSGSLWV 87
Score = 28.6 bits (56), Expect(3) = 2e-040
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -2
Query: 525 YPYASTCQLWL 557
YP ASTCQLWL
Sbjct: 87 YP*ASTCQLWL 55
Score = 25.8 bits (50), Expect(3) = 9e-027
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1 / -3
Query: 514 VAGNTHTLPLVNSG 555
V TH LPLVNSG
Sbjct: 98 VLAGTHRLPLVNSG 57
Score = 22.1 bits (42), Expect(4) = 3e-043
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / +3
Query: 522 TSNDAAPRAVL 490
T DAAPRA+L
Sbjct: 87 TGKDAAPRAIL 119
>gb|CW469203.1|CW469203 fsbb001f221m21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f221m21, DNA
sequence
Length = 752
Score = 105 bits (225), Expect(4) = 7e-040
Identities = 43/49 (87%), Positives = 46/49 (93%)
Frame = -1 / +3
Query: 492 LLRFLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFE 346
+L FLFL C+GCKCLASE+EATQTATL VDASPQLARKIPDTLFGIFFE
Sbjct: 384 ILCFLFLFCLGCKCLASELEATQTATLTVDASPQLARKIPDTLFGIFFE 530
Score = 105 bits (224), Expect(3) = 2e-036
Identities = 44/57 (77%), Positives = 49/57 (85%)
Frame = +2 / -2
Query: 341 ISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARHLQPMQSRNKKRRRTARGAA 511
++SKKIPNSVSGIFRASCGEAST RVAVWVAS SDARHLQP Q+RNKK+R A+
Sbjct: 535 LTSKKIPNSVSGIFRASCGEASTVRVAVWVASNSDARHLQPKQNRNKKQRMARGAAS 365
Score = 68.9 bits (144), Expect(3) = 1e-022
Identities = 31/52 (59%), Positives = 32/52 (61%)
Frame = +3 / -3
Query: 342 SPQRRSRTVYQGSSEQXXXXXXXXXXXXXWPLPLMPGICSLCRAETRSGGGR 497
SPQRRS+ VYQGSSEQ WP LMPGICSL R ETRS G R
Sbjct: 534 SPQRRSQIVYQGSSEQAAARHRP*GSPSGWPPTLMPGICSLSRTETRSRGWR 379
Score = 51.5 bits (106), Expect(4) = 7e-040
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -3 / +2
Query: 346 GDQPCRGWWHMG*TC**QR 290
GDQPCR WWHMG*TC**QR
Sbjct: 665 GDQPCRSWWHMG*TC**QR 721
Score = 51.5 bits (106), Expect(3) = 2e-036
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +2 / -2
Query: 281 ASNPLLLTSSAHMPPAPAWLIS 346
A +PLLLTSSAHMPPAPAWLIS
Sbjct: 730 AESPLLLTSSAHMPPAPAWLIS 665
Score = 47.8 bits (98), Expect(3) = 1e-022
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +3 / -3
Query: 282 LQTLCY*QVQPICHQPLHG*SP 347
L LCY*QVQPICHQ LHG*SP
Sbjct: 729 LNPLCY*QVQPICHQLLHG*SP 664
Score = 44.1 bits (90), Expect(4) = 7e-040
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2 / +1
Query: 578 CMVDTPAQPELTSGSVWV 525
C VDTPAQPELTSGS+WV
Sbjct: 304 CSVDTPAQPELTSGSLWV 357
Score = 37.3 bits (75), Expect(3) = 2e-036
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1 / -1
Query: 514 VAGNTHTLPLVNSGWAGVSTMH 579
V TH LPLVNSG AGVST H
Sbjct: 368 VLAGTHRLPLVNSG*AGVSTEH 303
Score = 30.9 bits (61), Expect(3) = 1e-022
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3 / -3
Query: 525 YPYASTCQLWLGRRVY 572
YP ASTCQLWL VY
Sbjct: 357 YP*ASTCQLWLSWCVY 310
Score = 22.1 bits (42), Expect(4) = 7e-040
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / +3
Query: 522 TSNDAAPRAVL 490
T DAAPRA+L
Sbjct: 357 TGKDAAPRAIL 389
>gb|CN133998.1|CN133998 OX1_19_D01.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_19_D01_A002 5', mRNA sequence
Length = 689
Score = 127 bits (272), Expect(2) = 4e-038
Identities = 54/85 (63%), Positives = 60/85 (70%)
Frame = -1 / +3
Query: 492 LLRFLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 313
L L L+C C+ QTA L VD S Q A+ IP +FGIFFEEINHAGAGG+W
Sbjct: 318 LFHVLVLVCSLCQIFYIGSVVAQTAQLTVDVSSQNAQTIPGNMFGIFFEEINHAGAGGLW 497
Query: 312 AELVSNRGFEAGGLHTPSNIDPWSI 238
AELVSNRGFEAGG +TPSNIDPW I
Sbjct: 498 AELVSNRGFEAGGSNTPSNIDPWLI 572
Score = 51.9 bits (107), Expect(2) = 4e-038
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = -1 / +1
Query: 234 GDDSSVFVETDRTSCFSRNIVALRMEVLC 148
GD+S++ V TDR+SCF+ N +ALRMEVLC
Sbjct: 577 GDESNIIVATDRSSCFASNPIALRMEVLC 663
>gb|BI140713.1|BI140713 IP1_52_H01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 457
Score = 150 bits (323), Expect = 1e-035
Identities = 57/65 (87%), Positives = 63/65 (96%)
Frame = -1 / +2
Query: 195 SCFSRNIVALRMEVLCDNCPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSL 16
+CFSRNI+ALRMEVLCDNCPTGGVG+YNPGFWGMNIE+GK YNLVM+VKSPETTDL VSL
Sbjct: 8 ACFSRNIIALRMEVLCDNCPTGGVGIYNPGFWGMNIEDGKAYNLVMYVKSPETTDLIVSL 187
Query: 15 TSSNG 1
TSS+G
Sbjct: 188 TSSDG 202
Score = 148 bits (318), Expect = 7e-035
Identities = 58/63 (92%), Positives = 59/63 (93%)
Frame = -3 / +1
Query: 193 MFQSKHRCSQDGGPLR*LSYWWCWCLQPRVLGHEHRRRKGLQSCYVC*VTRNN*LDSFTN 14
MFQSKH CS+DGGPLR*LSYWWCW LQPRVLGHEHRR KGLQSCYVC*VTRNN LDSFTN
Sbjct: 10 MFQSKHHCSEDGGPLR*LSYWWCWYLQPRVLGHEHRRWKGLQSCYVC*VTRNNRLDSFTN 189
Query: 13 KL* 5
KL*
Sbjct: 190 KL* 198
Score = 138 bits (297), Expect = 6e-032
Identities = 55/64 (85%), Positives = 59/64 (92%)
Frame = +1 / -1
Query: 1 PVRAC**NCQVSCFW*LNKHNKIVDLSFFYVHAPKPWVVNTNTTSRTIIAKDLHPESNDV 180
P+RAC**N QV CFW*LN HNKIV LS FYVHAP+PWVVNTNTTSRT+IAKDLHP+SNDV
Sbjct: 202 PIRAC**NYQVGCFW*LNIHNKIVGLSIFYVHAPEPWVVNTNTTSRTVIAKDLHPQSNDV 23
Query: 181 STET 192
STET
Sbjct: 22 STET 11
Score = 132 bits (283), Expect = 5e-030
Identities = 58/64 (90%), Positives = 59/64 (92%)
Frame = +2 / -2
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRATMF 181
P ELVSET+KSVVSGDLT ITRL* FPSSMFMPQNPGL* PTPPVGQLSQRTSILRA MF
Sbjct: 201 PSELVSETIKSVVSGDLTYITRL*AFPSSMFMPQNPGL*IPTPPVGQLSQRTSILRAMMF 22
Query: 182 RLKH 193
RLKH
Sbjct: 21 RLKH 10
Score = 130 bits (279), Expect = 2e-029
Identities = 54/62 (87%), Positives = 58/62 (93%)
Frame = +3 / -3
Query: 9 SLLVKLSSQLFLVT*QT*QDCRPFLLLCSCPKTLGCKHQHHQ*DNYRKGPPS*EQRCFD* 188
SLLVKLSS+LFLVT* T*QDCRPF LLCSCP+TLGCK+QHHQ*D+YRKGPPS EQ CFD*
Sbjct: 194 SLLVKLSSRLFLVT*HT*QDCRPFHLLCSCPRTLGCKYQHHQ*DSYRKGPPSSEQ*CFD* 15
Query: 189 NM 194
NM
Sbjct: 14 NM 9
>gb|CW169583.1|CW169583 104_579_11154749_116_36503_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11154749, DNA
sequence
Length = 731
Score = 145 bits (311), Expect = 7e-034
Identities = 53/72 (73%), Positives = 64/72 (88%)
Frame = -1 / +2
Query: 309 ELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTG 130
+++ GFEAGG +TPSNIDPW+IIGD+SS++V T+ SCF+RNIVALRMEVLCDNC TG
Sbjct: 209 DIIYPLGFEAGGPYTPSNIDPWNIIGDESSIYVTTEAASCFTRNIVALRMEVLCDNCRTG 388
Query: 129 GVGVYNPGFWGM 94
GVG+YNPGFWGM
Sbjct: 389 GVGIYNPGFWGM 424
Score = 110 bits (235), Expect = 2e-023
Identities = 48/66 (72%), Positives = 53/66 (80%)
Frame = +2 / -3
Query: 95 MPQNPGL*TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWR 274
MPQNPGL* PTPPV QLSQRTSILRAT+F +K + SV T E+SSPMM HGSMF+GV
Sbjct: 423 MPQNPGL*MPTPPVRQLSQRTSILRATIFLVKQEAASVVTYMEDSSPMMFHGSMFEGV*G 244
Query: 275 PPASNP 292
PPAS P
Sbjct: 243 PPASKP 226
>gb|CW206795.1|CW206795 104_635_11187778_148_36966_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11187778, DNA
sequence
Length = 654
Score = 145 bits (311), Expect = 7e-034
Identities = 53/72 (73%), Positives = 64/72 (88%)
Frame = -1 / +3
Query: 309 ELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTG 130
+++ GFEAGG +TPSNIDPW+IIGD+SS++V T+ SCF+RNIVALRMEVLCDNC TG
Sbjct: 384 DIIYPLGFEAGGPYTPSNIDPWNIIGDESSIYVTTEAASCFTRNIVALRMEVLCDNCRTG 563
Query: 129 GVGVYNPGFWGM 94
GVG+YNPGFWGM
Sbjct: 564 GVGIYNPGFWGM 599
Score = 110 bits (235), Expect = 2e-023
Identities = 48/66 (72%), Positives = 53/66 (80%)
Frame = +2 / -3
Query: 95 MPQNPGL*TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWR 274
MPQNPGL* PTPPV QLSQRTSILRAT+F +K + SV T E+SSPMM HGSMF+GV
Sbjct: 598 MPQNPGL*MPTPPVRQLSQRTSILRATIFLVKQEAASVVTYMEDSSPMMFHGSMFEGV*G 419
Query: 275 PPASNP 292
PPAS P
Sbjct: 418 PPASKP 401
>gb|CF431332.1|CF431332 NIT1_5_E04.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_5_E04_A002 5', mRNA sequence
Length = 266
Score = 138 bits (296), Expect = 8e-032
Identities = 54/61 (88%), Positives = 57/61 (93%)
Frame = -1 / +1
Query: 312 AELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPT 133
A L NRGFEAGGLHTPSNIDPWSIIGDDSS++VETDRTSCFS NI+ALRMEVLCDNCPT
Sbjct: 82 AALDRNRGFEAGGLHTPSNIDPWSIIGDDSSIYVETDRTSCFSPNIIALRMEVLCDNCPT 261
Query: 132 G 130
G
Sbjct: 262 G 264
Score = 132 bits (282), Expect = 7e-030
Identities = 55/62 (88%), Positives = 57/62 (91%)
Frame = +2 / -1
Query: 128 PPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTS 307
PPVGQLSQRTSILRA MF LKHDVRSVST EESSPMMDHGSMFDGVWRPPASNPL L+S
Sbjct: 266 PPVGQLSQRTSILRAMMFGLKHDVRSVSTYIEESSPMMDHGSMFDGVWRPPASNPLFLSS 87
Query: 308 SA 313
+A
Sbjct: 86 AA 81
Score = 124 bits (265), Expect = 1e-027
Identities = 48/56 (85%), Positives = 49/56 (87%)
Frame = -3 / +3
Query: 295 QRV*SWRPPYSIKH*PMVHHWRRLLCICGDRSYIMFQSKHRCSQDGGPLR*LSYWW 128
QRV*SWRPPYSIKH*PMVHHWR L ICGD S IMFQ KH CS+DGGPLR*LSYWW
Sbjct: 99 QRV*SWRPPYSIKH*PMVHHWR*LFYICGD*SDIMFQPKHHCSEDGGPLR*LSYWW 266
Score = 116 bits (247), Expect = 4e-025
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +1 / -3
Query: 130 TSRTIIAKDLHPESNDVSTET*CTIGLHKYRGVVSNDGPWVNV*WSMEASSFKPSVT 300
TSRT+IAKDLHP+SNDV ET*C I LH YR V+SNDGPWVNV*WSMEASSFKPSV+
Sbjct: 264 TSRTVIAKDLHPQSNDVWAET*CPISLHIYRRVISNDGPWVNV*WSMEASSFKPSVS 94
Score = 110 bits (234), Expect = 3e-023
Identities = 45/57 (78%), Positives = 49/57 (85%)
Frame = +3 / -2
Query: 129 HQ*DNYRKGPPS*EQRCFD*NMMYDRSPQIQRSRLQ*WTMGQCLMEYGGLQLQTLCY 299
HQ*D+YRKGPPS EQ C *NMM D+SP I +S LQ*WTMGQCLMEYGGLQLQTLC+
Sbjct: 265 HQ*DSYRKGPPSSEQ*CLG*NMMSDQSPHI*KSHLQ*WTMGQCLMEYGGLQLQTLCF 95
Score = 103 bits (220), Expect = 2e-021
Identities = 44/56 (78%), Positives = 47/56 (83%)
Frame = -2 / +2
Query: 311 LNLLVTEGLKLEASILHQTLTHGPSLETTPLYLWRPIVHHVSVETSLLSGWRSFAI 144
L + TEGLKLEASILHQTLTHGPSLE T LY+WR I HHVS +TSLL GWRSFAI
Sbjct: 83 LRWIETEGLKLEASILHQTLTHGPSLEMTLLYMWRLIGHHVSAQTSLL*GWRSFAI 250
>gb|BG322938.1|BG322938 EM1_15_H09.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 133 bits (284), Expect(2) = 5e-031
Identities = 52/64 (81%), Positives = 58/64 (90%)
Frame = -1 / +1
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L C+GC+C E+EATQTATL VDA+PQLARKIP+TLFGIFFEEINHAGAGGIWAELV
Sbjct: 322 LLLFCVGCRCRPLEIEATQTATLKVDATPQLARKIPETLFGIFFEEINHAGAGGIWAELV 501
Query: 300 SNRG 289
+NRG
Sbjct: 502 NNRG 513
Score = 129 bits (276), Expect = 4e-029
Identities = 53/67 (79%), Positives = 59/67 (88%)
Frame = +2 / -2
Query: 290 PLLLTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARHLQPMQ 469
PLLLTSSAHMPPAPAWLISSK IPN+VSGIFRASCG AST RVAVWVAS S RHLQP Q
Sbjct: 512 PLLLTSSAHMPPAPAWLISSKNIPNNVSGIFRASCGVASTLRVAVWVASISKGRHLQPTQ 333
Query: 470 SRNKKRR 490
+R++ ++
Sbjct: 332 NRSRTQK 312
Score = 22.6 bits (43), Expect(2) = 5e-031
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -2 / +2
Query: 596 GWWMHACMV 570
GWWMH ++
Sbjct: 224 GWWMHDTLI 250
>gb|CW262292.1|CW262292 104_729_11229977_148_35205_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229977, DNA
sequence
Length = 664
Score = 87.7 bits (185), Expect(3) = 2e-030
Identities = 34/45 (75%), Positives = 39/45 (86%)
Frame = -1 / +3
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFE 346
L L C+GC+C E+EATQTATL VDA+PQLARKIP+TLFGIFFE
Sbjct: 234 LLLFCVGCRCRPLEIEATQTATLKVDATPQLARKIPETLFGIFFE 368
Score = 85.4 bits (180), Expect(3) = 5e-029
Identities = 34/52 (65%), Positives = 43/52 (82%)
Frame = +2 / -1
Query: 335 WLISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARHLQPMQSRNKKRR 490
+ ++SK IPN+VSGIFRASCG AST RVAVWVAS S RHLQP Q+R++ ++
Sbjct: 379 YFLTSKNIPNNVSGIFRASCGVASTLRVAVWVASISKGRHLQPTQNRSRTQK 224
Score = 49.6 bits (102), Expect(3) = 5e-029
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +2 / -3
Query: 281 ASNPLLLTSSAHMPPAPAWLIS 346
A PLLLTSSAHMPPAPAWLIS
Sbjct: 530 AEVPLLLTSSAHMPPAPAWLIS 465
Score = 49.2 bits (101), Expect(3) = 2e-030
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = -1 / +1
Query: 345 EINHAGAGGIWAELVSNRGFEA 280
EINHAGAGGIWAELV+NRG A
Sbjct: 466 EINHAGAGGIWAELVNNRGTSA 531
Score = 35.0 bits (70), Expect(3) = 2e-030
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1 / +1
Query: 291 GFEAGGLHTPSNID 250
GFEAGG HTPSNID
Sbjct: 622 GFEAGGPHTPSNID 663
Score = 31.8 bits (63), Expect(3) = 5e-029
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3 / -1
Query: 249 GQCLMEYGGLQLQTL 293
GQCLMEY GLQL+ L
Sbjct: 664 GQCLMEYEGLQLRNL 620
>gb|CW315229.1|CW315229 104_806_11472253_148_35827_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472253, DNA
sequence
Length = 602
Score = 54.2 bits (112), Expect(3) = 5e-024
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = -1 / -1
Query: 291 GFEAGGLHTPSNIDPWSIIGDDSSV 217
GFEAGG +TPSNIDPW IIGD+SS+
Sbjct: 77 GFEAGGPNTPSNIDPWLIIGDESSI 3
Score = 52.4 bits (108), Expect(3) = 5e-024
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -1 / -1
Query: 363 FGIFFEEINHAGAGGIWAELVSNRGFE 283
F ++ EINHAGAGG+WAELVSNRG E
Sbjct: 260 FWLYL*EINHAGAGGLWAELVSNRGSE 180
Score = 45.1 bits (92), Expect(3) = 5e-024
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = -1 / -2
Query: 414 LAVDASPQLARKIPDTLFGIFFE 346
L+V+ASPQ ARKIPD +FGIFFE
Sbjct: 475 LSVNASPQNARKIPDKMFGIFFE 407
>gb|BI075789.1|BI075789 IP1_21_C05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 577
Score = 108 bits (231), Expect = 7e-023
Identities = 40/51 (78%), Positives = 47/51 (92%)
Frame = -1 / +1
Query: 153 LCDNCPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
LC++CP GGVG+YNPGFWGMNIE+GK YNLVM+VKSP+ T LTVSLTSS+G
Sbjct: 1 LCNDCPAGGVGIYNPGFWGMNIEDGKAYNLVMYVKSPKNTCLTVSLTSSDG 153
>gb|BI075931.1|BI075931 IP1_23_B05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 376
Score = 108 bits (231), Expect = 7e-023
Identities = 40/51 (78%), Positives = 47/51 (92%)
Frame = -1 / +1
Query: 153 LCDNCPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
LC++CP GGVG+YNPGFWGMNIE+GK YNLVM+VKSP+ T LTVSLTSS+G
Sbjct: 1 LCNDCPAGGVGIYNPGFWGMNIEDGKAYNLVMYVKSPKNTCLTVSLTSSDG 153
>gb|CW792157.1|CW792157 SP__Ba0089F13.f SP__Ba Sorghum propinquum genomic clone
SP__Ba0089F13 5', DNA sequence
Length = 196
Score = 107 bits (228), Expect = 2e-022
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = -1 / +2
Query: 291 GFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRME 157
GFEAGGLHTPSNIDPW IIGDDSS++VETDRTSCFSRNI+ALRME
Sbjct: 62 GFEAGGLHTPSNIDPWPIIGDDSSIYVETDRTSCFSRNIIALRME 196
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 911,608,234
Number of Sequences: 832831
Number of extensions: 15070403
Number of successful extensions: 169175
Number of sequences better than 1.0e-020: 31
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 19263088593
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)