TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3276201.2.1
(1827 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW301297.1|CW301297 104_785_11464126_148_36268_095 Sorgh... 448 e-124
gb|CW427973.1|CW427973 fsbb001f140d21k0 Sorghum methylation... 356 e-116
gb|CW033362.1|CW033362 104_262_10501912_115_30362 Sorghum m... 406 e-112
gb|CW126731.1|CW126731 104_507_11113054_116_34735_087 Sorgh... 368 e-100
gb|CW333040.1|CW333040 104_830_11481731_148_36039_034 Sorgh... 350 1e-099
gb|CW316897.1|CW316897 104_808_11473132_116_35854_008 Sorgh... 295 1e-078
gb|BZ338080.1|BZ338080 ia92h04.g1 WGS-SbicolorF (JM107 adap... 140 3e-076
gb|CW143318.1|CW143318 104_535_11137350_116_34953_029 Sorgh... 196 2e-073
gb|CW130722.1|CW130722 104_513_11115274_148_34777_041 Sorgh... 223 1e-068
gb|CW327128.1|CW327128 104_822_11478580_148_35969_004 Sorgh... 223 5e-068
gb|BG048470.1|BG048470 OV1_13_H08.g1_A002 Ovary 1 (OV1) Sor... 256 7e-067
gb|CW031197.1|CW031197 104_259_10500664_116_30398 Sorghum m... 209 2e-066
gb|CW143319.1|CW143319 104_535_11137350_148_34957_029 Sorgh... 253 6e-066
gb|CW333039.1|CW333039 104_830_11481731_116_36040_034 Sorgh... 226 2e-062
gb|BZ334942.1|BZ334942 hx94e04.b1 WGS-SbicolorF (JM107 adap... 223 9e-062
gb|CW327127.1|CW327127 104_822_11478580_116_35968_004 Sorgh... 142 5e-061
gb|CW126732.1|CW126732 104_507_11113054_148_34731_087 Sorgh... 220 8e-061
gb|CF487663.1|CF487663 POL1_45_E01.b1_A002 Pollen Sorghum b... 217 7e-060
gb|CW119865.1|CW119865 104_497_11109005_148_34646_031 Sorgh... 100 2e-058
gb|BG273460.1|BG273460 OV2_26_A05.b1_A002 Ovary 2 (OV2) Sor... 227 4e-058
gb|CW130721.1|CW130721 104_513_11115274_116_34781_041 Sorgh... 167 7e-054
gb|CW387722.1|CW387722 fsbb001f072d02k0 Sorghum methylation... 209 1e-052
gb|BZ338079.1|BZ338079 ia92h04.b1 WGS-SbicolorF (JM107 adap... 182 4e-052
gb|BE360627.1|BE360627 DG1_64_F08.g1_A002 Dark Grown 1 (DG1... 190 7e-047
gb|CW427972.1|CW427972 fsbb001f140d21f0 Sorghum methylation... 124 2e-044
gb|CF480251.1|CF480251 POL1_64_D06.g1_A002 Pollen Sorghum b... 119 1e-043
gb|CW088279.1|CW088279 104_433_10948091_114_32572_044 Sorgh... 116 4e-043
gb|CN138573.1|CN138573 OX1_64_D01.g1_A002 Oxidatively-stres... 109 7e-043
gb|CN138490.1|CN138490 OX1_64_D01.b1_A002 Oxidatively-stres... 113 2e-042
gb|BZ335098.1|BZ335098 hx95e04.g1 WGS-SbicolorF (JM107 adap... 167 4e-040
gb|CW387721.1|CW387721 fsbb001f072d02f0 Sorghum methylation... 69 2e-039
gb|CX606463.1|CX606463 ANR1_3_E04.b1_A002 Anaerobic roots S... 164 3e-039
gb|BG412888.1|BG412888 OV2_36_B07.b1_A002 Ovary 2 (OV2) Sor... 116 5e-039
gb|CW088281.1|CW088281 104_433_10948091_250_32620_044 Sorgh... 116 1e-038
gb|CW088283.1|CW088283 104_433_10948092_114_32573_044 Sorgh... 115 2e-038
gb|CX610379.1|CX610379 ANR1_18_G11.b1_A002 Anaerobic roots ... 160 6e-038
gb|CX621984.1|CX621984 GABR1_61_G10.b2_A002 GA- or brassino... 159 2e-037
gb|CW088282.1|CW088282 104_433_10948091_251_32621_044 Sorgh... 156 8e-037
gb|CW415805.1|CW415805 fsbb001f116b02k0 Sorghum methylation... 155 1e-036
gb|CW088280.1|CW088280 104_433_10948091_116_32575_044 Sorgh... 144 4e-036
gb|CL184899.1|CL184899 104_398_10899163_114_32368_072 Sorgh... 105 1e-035
gb|BG356639.1|BG356639 OV2_26_A05.g1_A002 Ovary 2 (OV2) Sor... 149 1e-034
gb|BG412577.1|BG412577 OV2_36_B07.g1_A002 Ovary 2 (OV2) Sor... 116 5e-034
gb|CW079139.1|CW079139 104_398_10899163_116_32372_072 Sorgh... 131 5e-031
gb|CW351701.1|CW351701 fsbb001f013j03f0 Sorghum methylation... 97 3e-030
gb|CX606553.1|CX606553 ANR1_3_E04.g1_A002 Anaerobic roots S... 66 1e-028
gb|CW316898.1|CW316898 104_808_11473132_148_35858_008 Sorgh... 82 3e-028
gb|CF483952.1|CF483952 POL1_2_E02.b1_A002 Pollen Sorghum bi... 108 2e-027
gb|CX610093.1|CX610093 ANR1_16_C09.g1_A002 Anaerobic roots ... 66 1e-025
gb|BE918281.1|BE918281 OV1_1_D11.g1_A002 Ovary 1 (OV1) Sorg... 116 8e-025
gb|CX622072.1|CX622072 GABR1_61_G10.g2_A002 GA- or brassino... 66 8e-024
gb|CX610456.1|CX610456 ANR1_18_G11.g1_A002 Anaerobic roots ... 66 2e-023
gb|BG048405.1|BG048405 OV1_13_H08.b1_A002 Ovary 1 (OV1) Sor... 99 3e-023
gb|CW365574.1|CW365574 fsbb001f038c18f0 Sorghum methylation... 109 2e-022
gb|CN134163.1|CN134163 OX1_20_D08.g1_A002 Oxidatively-stres... 109 2e-022
gb|CW034646.1|CW034646 104_264_10502670_115_30380 Sorghum m... 90 2e-022
gb|CW365575.1|CW365575 fsbb001f038c18k0 Sorghum methylation... 108 2e-022
>gb|CW301297.1|CW301297 104_785_11464126_148_36268_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464126, DNA
sequence
Length = 607
Score = 448 bits (973), Expect = e-124
Identities = 182/201 (90%), Positives = 189/201 (94%)
Frame = +2 / +1
Query: 755 LKSVVSPYAGKVIHWDVVNENLHFNFFETKLGPMASAQIYQQVGQLDRNAILFMNEFNTL 934
LKSVVS YA KVIHWDVVNENLHFNFFETKLGP ASAQI+QQVGQLDRN ILFMNEFNTL
Sbjct: 1 LKSVVSRYAFKVIHWDVVNENLHFNFFETKLGPGASAQIFQQVGQLDRNPILFMNEFNTL 180
Query: 935 EQPGDPNPVPAKYVAKMNQIRGYAGNGGLKLGVGLESHFSTPNIPYMRSSLDTLAKLKLP 1114
EQPGDPNP PAKYVAKM QIR Y GNGGLKLGVGLESHFSTPNIPYMRSSLDTLAKLKLP
Sbjct: 181 EQPGDPNPTPAKYVAKMTQIRSYPGNGGLKLGVGLESHFSTPNIPYMRSSLDTLAKLKLP 360
Query: 1115 MWLTEVDVVKSPNQVKYLEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPV 1294
MWLTEVDVVK PNQVK LEQVLREG+ HP V+GIVMWAAWHA+GCYVMCLTDNSFKNLPV
Sbjct: 361 MWLTEVDVVKGPNQVKNLEQVLREGYGHPGVNGIVMWAAWHAKGCYVMCLTDNSFKNLPV 540
Query: 1295 GDLVDKLIAEWKTHRASATTD 1357
GD+V++LIAEWKTHRASATTD
Sbjct: 541 GDVVEQLIAEWKTHRASATTD 603
Score = 193 bits (417), Expect(2) = 1e-086
Identities = 85/122 (69%), Positives = 92/122 (75%)
Frame = -3 / -2
Query: 1357 IGGGGRAVRLPLGDELVDEVAHGEVLEAVVREAHDVAAPGMPRCPHDDAVDVGVGEAFPE 1178
+GGGGRAVRLPL DEL D+VA GEVLEAVVREAHDVAA G+PR PHDDA+D GV FPE
Sbjct: 603 VGGGGRAVRLPLRDELFDDVADGEVLEAVVREAHDVAALGVPRRPHDDAIDAGVSVPFPE 424
Query: 1177 HLLQVLDLVGALDDIHLGEPHGQLQLGERVQRAPHVRDVGCXXXXXXXXXXXXXXXAGVA 998
HLLQVL LVG+LDDIHLGEPH QL+L +RVQRAPHVRDV AGVA
Sbjct: 423 HLLQVLHLVGSLDDIHLGEPHRQLELRQRVQRAPHVRDVRRAEVALQSDAELQSAIAGVA 244
Query: 997 AD 992
D
Sbjct: 243 PD 238
Score = 179 bits (385), Expect(2) = 5e-061
Identities = 79/104 (75%), Positives = 81/104 (77%)
Frame = -1 / -3
Query: 1356 SVVADARCVFHSAMSLSTRSPTGRFLKLLSVRHMT*QPLACHAAHMTMPSTLGWAKPSLS 1177
SVVADARCVFHSAMS ST SPTGRFLKLLSVRHMT*QPLACHAAHMTMP T G PSLS
Sbjct: 602 SVVADARCVFHSAMSCSTTSPTGRFLKLLSVRHMT*QPLACHAAHMTMPLTPGCPYPSLS 423
Query: 1176 TCSRYXXXXXXXXXXXXXSHMGSFSLASVSSELLMYGMLGVLKW 1045
TCSR+ SH+GS S ASVSSELLMYGM GVLKW
Sbjct: 422 TCSRFFTWLGPLTTSTSVSHIGSLSFASVSSELLMYGMFGVLKW 291
Score = 149 bits (320), Expect(2) = 1e-086
Identities = 63/79 (79%), Positives = 66/79 (83%)
Frame = -1 / -3
Query: 993 IWFILATYLAGTGLGSPGCSSVLNSFMNRMALRSSCPTCW*ICADAMGPSFVSKKLKCRF 814
I I ATYLAG GLGSPGCSSVLNSFM R+ LRSSCPTCW ICADA GPS VSKKLK RF
Sbjct: 239 ICVIFATYLAGVGLGSPGCSSVLNSFMKRIGLRSSCPTCWKICADAPGPSLVSKKLKWRF 60
Query: 813 SFTTSQWMTLPA*GDTTDL 757
S TTSQW+TL A* +TTDL
Sbjct: 59 SLTTSQWITLKA*RETTDL 3
Score = 136 bits (292), Expect(3) = 8e-061
Identities = 57/79 (72%), Positives = 64/79 (81%)
Frame = +1 / +3
Query: 757 QVRRVTLRRQGHPLGRGEREPALQLLRDEAGPHGVGTDLPAGGAAGPQCHPIHERIQHAG 936
QVRR+ LR QG PLGR +REP LQLLRD+A P VG DLPAGGAAGPQ P+HER+QHAG
Sbjct: 3 QVRRLPLRLQGDPLGRRQREPPLQLLRDQARPRRVGADLPAGGAAGPQPDPLHERVQHAG 182
Query: 937 AARRSQPCARQVRGQDEPD 993
AARR QP A QVRG+D+ D
Sbjct: 183 AARRPQPNAGQVRGEDDTD 239
Score = 78.5 bits (165), Expect(2) = 5e-061
Identities = 32/40 (80%), Positives = 32/40 (80%)
Frame = -2 / -1
Query: 977 PRTWRAQGWDRRAAPAC*IRS*IGWHCGPAAPPAGRSVPT 858
PRTW A GW RRAAPAC* RS* G CGPAAPPAGRS PT
Sbjct: 223 PRTWPALGWGRRAAPAC*TRS*RGSGCGPAAPPAGRSAPT 104
Score = 74.8 bits (157), Expect(2) = 1e-026
Identities = 34/67 (50%), Positives = 37/67 (55%)
Frame = +3 / +2
Query: 756 SSPSCHPTPAXXXXXXXXXXXXXXXXXXXXWAPWRRHRSTSRWGSWTAMPSYS*TNSTRW 935
SSPS TP+ AP RR RS+SRWGSWTA S S*T+STRW
Sbjct: 2 SSPSSPATPSR*STGTSSTRTSTSTSSRPS*APARRRRSSSRWGSWTATRSSS*TSSTRW 181
Query: 936 SSPAIPT 956
SSPA PT
Sbjct: 182 SSPATPT 202
Score = 70.3 bits (147), Expect(3) = 8e-061
Identities = 29/56 (51%), Positives = 30/56 (53%)
Frame = +3 / +2
Query: 1074 *GARWTRXXXXXXXXXXXRWMSSRAPTRSSTWSRCSGKXXXXXXXXXXXCGQRGMP 1241
*GARWTR RWMSSR PTR TWSRCSGK CG+RG P
Sbjct: 320 *GARWTRWRSSSCRCGSPRWMSSRDPTR*RTWSRCSGKGTDTPASMASSCGRRGTP 487
Score = 68.9 bits (144), Expect(3) = 8e-061
Identities = 30/45 (66%), Positives = 30/45 (66%)
Frame = +1 / +3
Query: 1222 VGSVACQGLLRHVPHGQQLQEXXXXXXXXXXXXXVEDAPRVRHHR 1356
VG VA QGLLRHVPHGQQLQE VEDAPRVRHHR
Sbjct: 468 VGGVARQGLLRHVPHGQQLQEPPRRRRRRTAHRGVEDAPRVRHHR 602
Score = 68.0 bits (142), Expect(2) = 1e-026
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1 / +3
Query: 1048 LQHTQHPVHEELAGHARQAEAAHVAHRGGCR 1140
LQH +HPVHEELAGHA +A+AA VAHRGGCR
Sbjct: 294 LQHAEHPVHEELAGHAGEAQAADVAHRGGCR 386
>gb|CW427973.1|CW427973 fsbb001f140d21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f140d21, DNA
sequence
Length = 707
Score = 356 bits (772), Expect(2) = e-116
Identities = 144/170 (84%), Positives = 157/170 (92%)
Frame = +2 / +1
Query: 407 ANDKPMAHANVSIELLRLGFPFGNAITKEILGLPAYEKWFTSRFSVATFENEMKWYSTEW 586
A+ KP+AHANVSIELLR+GFPFGNA TKEI LPAYEKWFTSRF+VATFENEMKWYSTEW
Sbjct: 196 ADGKPIAHANVSIELLRMGFPFGNAATKEITELPAYEKWFTSRFTVATFENEMKWYSTEW 375
Query: 587 TQNHEDYRVPDAMMNLMRKYKIKVRGHNVFWDDQNSQMQWVKPLNLAQLKAAMQKRLKSV 766
TQNHEDY V D M++LM+++ IKVRGHNVFWDDQNSQM+WV PL+LAQLKAA+QKRLKSV
Sbjct: 376 TQNHEDYGVADKMLSLMQRHGIKVRGHNVFWDDQNSQMKWVMPLSLAQLKAAIQKRLKSV 555
Query: 767 VSPYAGKVIHWDVVNENLHFNFFETKLGPMASAQIYQQVGQLDRNAILFM 916
VS YAGKVIHWDVV ENLHFNFFETKLGP ASAQI+QQVGQLDRN ILFM
Sbjct: 556 VSRYAGKVIHWDVVKENLHFNFFETKLGPGASAQIFQQVGQLDRNPILFM 705
Score = 299 bits (647), Expect(3) = 3e-097
Identities = 132/171 (77%), Positives = 139/171 (81%)
Frame = -1 / -1
Query: 918 FMNRMALRSSCPTCW*ICADAMGPSFVSKKLKCRFSFTTSQWMTLPA*GDTTDLSRFCMA 739
FM R+ LRSSCPTCW ICADA GPS VSKKLK RFS TTSQW+TLPA* +TTDL RF MA
Sbjct: 707 FMKRIGLRSSCPTCWKICADAPGPSLVSKKLKWRFSLTTSQWITLPA*RETTDLRRFWMA 528
Query: 738 ALSCARLRGFTHCICEFWSSQNTLCPRTLILYLRIRFIMASGTR*SSWFWVHSVLYHFIS 559
ALS ARL G TH ICEFWSSQNTL PRTL+ IR + S T *SSWF VHSVLYHFIS
Sbjct: 527 ALSWARLSGITHFICEFWSSQNTLWPRTLMPCRCIRLSILSATP*SSWFCVHSVLYHFIS 348
Query: 558 FSKVATLKRDVNHFSYAGRPRISLVIALPNGKPRRRSSMLTLACAIGLSLA 406
FSKVAT+KR+VNHFSYAG ISLV ALPNGKP RRSSMLTLACAIGL A
Sbjct: 347 FSKVATVKREVNHFSYAGSSVISLVAALPNGKPMRRSSMLTLACAIGLPSA 195
Score = 281 bits (607), Expect(2) = 1e-075
Identities = 121/171 (70%), Positives = 131/171 (76%)
Frame = +1 / +3
Query: 406 RQRQADGACQREHRAPPPRLPVRQRDHQGDPRPPGIREVVHVALQRGHLRERDEVVQHRV 585
R+RQAD A QREHRAPP PVRQR HQGD R P +REVVH+AL RGHLRERDEVVQH V
Sbjct: 195 RRRQADRARQREHRAPPHGFPVRQRGHQGDHRAPRVREVVHLALHRGHLRERDEVVQHGV 374
Query: 586 DPEP*GLPRSGRHDEPDAQVQDQGARAQRVLGRPELADAVGEAPQPCAAQGSHAEAAQVR 765
D EP GL R + EPDA + QG R QRVLGRPELAD VG+A QPC AQG H EA QVR
Sbjct: 375 DAEPRGLRRRRQDAEPDAAARHQGPRPQRVLGRPELADEVGDAAQPCPAQGGHPEAPQVR 554
Query: 766 RVTLRRQGHPLGRGEREPALQLLRDEAGPHGVGTDLPAGGAAGPQCHPIHE 918
R+ LRRQG PLGR + EP LQLLRD+A P VG DLPAGGAAGPQ P+HE
Sbjct: 555 RLPLRRQGDPLGRRQGEPPLQLLRDQARPRRVGADLPAGGAAGPQPDPLHE 707
Score = 109 bits (232), Expect(4) = 1e-048
Identities = 53/82 (64%), Positives = 56/82 (68%)
Frame = -3 / -3
Query: 652 DLVLAHQVHHGVRNAVVLMVLGPLGAVPLHLVLEGGHAEARREPLLVCREAEDLLGDRVX 473
D V HQ H V +AVVL+VL PL AVPLHLVLEGGH EAR EPLLV E DLLG RV
Sbjct: 441 DAVPLHQAQHLVGDAVVLVVLRPLRAVPLHLVLEGGHGEARGEPLLVRGELGDLLGGRVA 262
Query: 472 XXXXXXXELDAHVGMRHRLVVG 407
ELDAHVG+R RL VG
Sbjct: 261 ERETHAEELDAHVGVRDRLAVG 196
Score = 85.8 bits (181), Expect(2) = e-116
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +2 / +1
Query: 272 ESHAPVDIWVDSVSLQPFTFDEWDGHTRRSADKVRRRTVK 391
+SHA VDIWVDSVSLQPFTFDEWD H RRSA K RRRTVK
Sbjct: 55 QSHAAVDIWVDSVSLQPFTFDEWDAHARRSAAKSRRRTVK 174
Score = 75.8 bits (159), Expect(3) = 3e-097
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = -1 / -1
Query: 390 FTVRRRTLSAERRV*PSHSSKVKGCSETLSTQMSTGAWL 274
FTVRRR L+AERR SHSSKVKGCS+TLSTQMST AWL
Sbjct: 173 FTVRRRDLAAERRAWASHSSKVKGCSDTLSTQMSTAAWL 57
Score = 72.1 bits (151), Expect(3) = 1e-034
Identities = 33/62 (53%), Positives = 38/62 (61%)
Frame = +1 / +3
Query: 274 EPRTS*HLGGQCLAAALHLRRVGRSHPPLRRQGPPANREGGRHGRQRQADGACQREHRAP 453
EPR+ HLGGQ + AALHLRRVGR P LRRQ P ANREGG +R+ R+
Sbjct: 57 EPRSCGHLGGQRVTAALHLRRVGRPRPALRRQVPSANREGGGRHGRRRRQADRARQREHR 236
Query: 454 PP 459
P
Sbjct: 237 AP 242
Score = 69.8 bits (146), Expect(4) = 1e-048
Identities = 31/44 (70%), Positives = 32/44 (72%)
Frame = -3 / -3
Query: 391 LHGSPADLVGGAAGVTVPLVEGEGLQRDTVHPDVNWCVALKVDL 260
LHGSP L GGA GV VPLVEGEGLQ VHPDV+ CVAL L
Sbjct: 174 LHGSPTGLGGGAPGVGVPLVEGEGLQ*HAVHPDVHSCVALHARL 43
Score = 62.0 bits (129), Expect(3) = 1e-034
Identities = 31/65 (47%), Positives = 33/65 (50%)
Frame = +3 / +2
Query: 723 LRSSRQPCRSGSSPSCHPTPAXXXXXXXXXXXXXXXXXXXXWAPWRRHRSTSRWGSWTAM 902
L SSR+P RS SSPS TPA AP RR RS+SRWGSWTA
Sbjct: 512 LPSSRRPSRSASSPSSPATPAR*STGTSSRRTSTSTSSRPS*APARRRRSSSRWGSWTAT 691
Query: 903 PSYS* 917
S S*
Sbjct: 692 RSSS* 706
Score = 53.3 bits (110), Expect(3) = 1e-034
Identities = 25/35 (71%), Positives = 26/35 (74%)
Frame = +3 / +2
Query: 543 WPPSRTR*SGTAPSGPRTMRTTAFRTP**T*CAST 647
WPPSRTR*SGTA SG RT RTTA T * *C+ T
Sbjct: 332 WPPSRTR*SGTARSGRRTTRTTASPTRC*A*CSGT 436
Score = 39.1 bits (79), Expect(4) = 1e-048
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -3 / -3
Query: 916 HE*DGIAVQLPHLLVDLCRRHGA 848
HE D +AVQLPHLL DL RR GA
Sbjct: 705 HEEDRVAVQLPHLLEDLRRRAGA 637
Score = 34.5 bits (69), Expect(4) = 1e-048
Identities = 17/26 (65%), Positives = 17/26 (65%)
Frame = -3 / -3
Query: 793 DDLAGVG*HDGLEPLLHGCLELRKVE 716
D LAGV DGLE LL G LEL K E
Sbjct: 582 DHLAGVAGDDGLEALLDGRLELGKAE 505
Score = 25.4 bits (49), Expect(2) = 1e-075
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3 / +2
Query: 273 RATHQLTSGWTVSRC 317
RAT TSGWT C
Sbjct: 56 RATQLWTSGWTACHC 100
Score = 23.1 bits (44), Expect(3) = 3e-097
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2 / -2
Query: 413 RWRPWRPP 390
R RPWRPP
Sbjct: 199 RRRPWRPP 176
>gb|CW033362.1|CW033362 104_262_10501912_115_30362 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10501912, DNA
sequence
Length = 586
Score = 406 bits (880), Expect = e-112
Identities = 164/194 (84%), Positives = 177/194 (91%)
Frame = +2 / +3
Query: 422 MAHANVSIELLRLGFPFGNAITKEILGLPAYEKWFTSRFSVATFENEMKWYSTEWTQNHE 601
+AHANVSIELLR+GFPFGNA TKEI LPAYEKWFTSRF+VATFENEMKWYSTEWTQNHE
Sbjct: 3 IAHANVSIELLRMGFPFGNAATKEITELPAYEKWFTSRFTVATFENEMKWYSTEWTQNHE 182
Query: 602 DYRVPDAMMNLMRKYKIKVRGHNVFWDDQNSQMQWVKPLNLAQLKAAMQKRLKSVVSPYA 781
DY V D M++LM+++ IKVRGHNVFWDDQNSQM+WV PL+LAQLKAA+QKRLKSVVS YA
Sbjct: 183 DYGVADKMLSLMQRHGIKVRGHNVFWDDQNSQMKWVMPLSLAQLKAAIQKRLKSVVSRYA 362
Query: 782 GKVIHWDVVNENLHFNFFETKLGPMASAQIYQQVGQLDRNAILFMNEFNTLEQPGDPNPV 961
G VIHWDVVNENLHFNFFETKLGP ASAQI+QQVGQL + ILFMNEFNTLEQPGDPNP
Sbjct: 363 GXVIHWDVVNENLHFNFFETKLGPGASAQIFQQVGQLXPHPILFMNEFNTLEQPGDPNPT 542
Query: 962 PAKYVAKMNQIRGY 1003
PAKYVAKM QIR Y
Sbjct: 543 PAKYVAKMTQIRSY 584
Score = 331 bits (718), Expect = 2e-089
Identities = 146/191 (76%), Positives = 153/191 (80%)
Frame = -1 / -1
Query: 993 IWFILATYLAGTGLGSPGCSSVLNSFMNRMALRSSCPTCW*ICADAMGPSFVSKKLKCRF 814
I I ATYLAG GLGSPGCSSVLNSFM R+ SCPTCW ICADA GPS VSKKLK RF
Sbjct: 574 ICVIFATYLAGVGLGSPGCSSVLNSFMKRIGCGXSCPTCWKICADAPGPSLVSKKLKWRF 395
Query: 813 SFTTSQWMTLPA*GDTTDLSRFCMAALSCARLRGFTHCICEFWSSQNTLCPRTLILYLRI 634
S TTSQW+T PA* +TTDL RF MAALS ARL G TH ICEFWSSQNTL PRTL+ I
Sbjct: 394 SLTTSQWITXPA*RETTDLRRFWMAALSWARLSGITHFICEFWSSQNTLWPRTLMPCRCI 215
Query: 633 RFIMASGTR*SSWFWVHSVLYHFISFSKVATLKRDVNHFSYAGRPRISLVIALPNGKPRR 454
R + S T *SSWF VHSVLYHFISFSKVAT+KR+VNHFSYAG ISLV ALPNGKP R
Sbjct: 214 RLSILSATP*SSWFCVHSVLYHFISFSKVATVKREVNHFSYAGSSVISLVAALPNGKPMR 35
Query: 453 RSSMLTLACAI 421
RSSMLTLACAI
Sbjct: 34 RSSMLTLACAI 2
Score = 308 bits (668), Expect = 1e-082
Identities = 133/191 (69%), Positives = 145/191 (75%)
Frame = +1 / +2
Query: 421 DGACQREHRAPPPRLPVRQRDHQGDPRPPGIREVVHVALQRGHLRERDEVVQHRVDPEP* 600
D A QREHRAPP PVRQR HQGD R P +REVVH+AL RGHLRERDEVVQH VD EP
Sbjct: 2 DRARQREHRAPPHGFPVRQRGHQGDHRAPRVREVVHLALHRGHLRERDEVVQHGVDAEPR 181
Query: 601 GLPRSGRHDEPDAQVQDQGARAQRVLGRPELADAVGEAPQPCAAQGSHAEAAQVRRVTLR 780
GL R + EPDA + QG R QRVLGRPELAD VG+A QPC AQG H EA QVRR+ LR
Sbjct: 182 GLRRRRQDAEPDAAARHQGPRPQRVLGRPELADEVGDAAQPCPAQGGHPEAPQVRRLPLR 361
Query: 781 RQGHPLGRGEREPALQLLRDEAGPHGVGTDLPAGGAAGPQCHPIHERIQHAGAARRSQPC 960
R G PLGR +REP LQLLRD+A P VG DLPAGGAAG P+HER+QHAGAARR QP
Sbjct: 362 RXGDPLGRRQREPPLQLLRDQARPRRVGADLPAGGAAGTAPDPLHERVQHAGAARRPQPN 541
Query: 961 ARQVRGQDEPD 993
A QVRG+D+ D
Sbjct: 542 AGQVRGEDDTD 574
Score = 100 bits (214), Expect(3) = 5e-040
Identities = 49/76 (64%), Positives = 52/76 (68%)
Frame = -3 / -3
Query: 652 DLVLAHQVHHGVRNAVVLMVLGPLGAVPLHLVLEGGHAEARREPLLVCREAEDLLGDRVX 473
D V HQ H V +AVVL+VL PL AVPLHLVLEGGH EAR EPLLV E DLLG RV
Sbjct: 233 DAVPLHQAQHLVGDAVVLVVLRPLRAVPLHLVLEGGHGEARGEPLLVRGELGDLLGGRVA 54
Query: 472 XXXXXXXELDAHVGMR 425
ELDAHVG+R
Sbjct: 53 ERETHAEELDAHVGVR 6
Score = 85.8 bits (181), Expect(2) = 1e-025
Identities = 40/78 (51%), Positives = 43/78 (55%)
Frame = +3 / +1
Query: 723 LRSSRQPCRSGSSPSCHPTPAXXXXXXXXXXXXXXXXXXXXWAPWRRHRSTSRWGSWTAM 902
L SSR+P RS SSPS TPA AP RR RS+SRWGSW
Sbjct: 304 LPSSRRPSRSASSPSSPATPAR*STGTSSTRTSTSTSSRPS*APARRRRSSSRWGSWXRT 483
Query: 903 PSYS*TNSTRWSSPAIPT 956
S S*T+STRWSSPA PT
Sbjct: 484 RSSS*TSSTRWSSPATPT 537
Score = 70.3 bits (147), Expect(3) = 5e-040
Identities = 30/40 (75%), Positives = 30/40 (75%)
Frame = -2 / -2
Query: 977 PRTWRAQGWDRRAAPAC*IRS*IGWHCGPAAPPAGRSVPT 858
PRTW A GW RRAAPAC* RS* G PAAPPAGRS PT
Sbjct: 558 PRTWPALGWGRRAAPAC*TRS*RGSGAVPAAPPAGRSAPT 439
Score = 53.3 bits (110), Expect(2) = 1e-025
Identities = 25/35 (71%), Positives = 26/35 (74%)
Frame = +3 / +1
Query: 543 WPPSRTR*SGTAPSGPRTMRTTAFRTP**T*CAST 647
WPPSRTR*SGTA SG RT RTTA T * *C+ T
Sbjct: 124 WPPSRTR*SGTARSGRRTTRTTASPTRC*A*CSGT 228
Score = 34.5 bits (69), Expect(3) = 5e-040
Identities = 17/26 (65%), Positives = 17/26 (65%)
Frame = -3 / -3
Query: 793 DDLAGVG*HDGLEPLLHGCLELRKVE 716
D LAGV DGLE LL G LEL K E
Sbjct: 374 DHLAGVAGDDGLEALLDGRLELGKAE 297
>gb|CW126731.1|CW126731 104_507_11113054_116_34735_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113054, DNA
sequence
Length = 513
Score = 368 bits (797), Expect = e-100
Identities = 146/170 (85%), Positives = 157/170 (92%)
Frame = +2 / +1
Query: 503 LPAYEKWFTSRFSVATFENEMKWYSTEWTQNHEDYRVPDAMMNLMRKYKIKVRGHNVFWD 682
LPAYEKWFTSRF+VATFENEMKWYSTEWTQNHEDY V D M++LM+++ IKVRGHNVFWD
Sbjct: 4 LPAYEKWFTSRFTVATFENEMKWYSTEWTQNHEDYGVADKMLSLMQRHGIKVRGHNVFWD 183
Query: 683 DQNSQMQWVKPLNLAQLKAAMQKRLKSVVSPYAGKVIHWDVVNENLHFNFFETKLGPMAS 862
DQNSQM+WV PL+LAQLKAA+QKRLKSVVS YAGKVIHWDVVNENLHFNFFETKLGP AS
Sbjct: 184 DQNSQMKWVMPLSLAQLKAAIQKRLKSVVSRYAGKVIHWDVVNENLHFNFFETKLGPGAS 363
Query: 863 AQIYQQVGQLDRNAILFMNEFNTLEQPGDPNPVPAKYVAKMNQIRGYAGN 1012
AQI+QQVGQLDRN ILFMNEFNTLEQPGDPNP P +YVAKM QIR Y GN
Sbjct: 364 AQIFQQVGQLDRNPILFMNEFNTLEQPGDPNPTPGQYVAKMTQIRSYPGN 513
Score = 288 bits (623), Expect = 2e-076
Identities = 125/163 (76%), Positives = 132/163 (80%)
Frame = -1 / -2
Query: 993 IWFILATYLAGTGLGSPGCSSVLNSFMNRMALRSSCPTCW*ICADAMGPSFVSKKLKCRF 814
I I ATY G GLGSPGCSSVLNSFM R+ LRSSCPTCW ICADA GPS VSKKLK RF
Sbjct: 494 ICVIFATYWPGVGLGSPGCSSVLNSFMKRIGLRSSCPTCWKICADAPGPSLVSKKLKWRF 315
Query: 813 SFTTSQWMTLPA*GDTTDLSRFCMAALSCARLRGFTHCICEFWSSQNTLCPRTLILYLRI 634
S TTSQW+TLPA* +TTDL RF MAALS ARL G TH ICEFWSSQNTL PRTL+ I
Sbjct: 314 SLTTSQWITLPA*RETTDLRRFWMAALSWARLSGITHFICEFWSSQNTLWPRTLMPCRCI 135
Query: 633 RFIMASGTR*SSWFWVHSVLYHFISFSKVATLKRDVNHFSYAG 505
R + S T *SSWF VHSVLYHFISFSKVAT+KR+VNHFSYAG
Sbjct: 134 RLSILSATP*SSWFCVHSVLYHFISFSKVATVKREVNHFSYAG 6
Score = 270 bits (583), Expect = 7e-071
Identities = 115/163 (70%), Positives = 127/163 (77%)
Frame = +1 / +3
Query: 505 PGIREVVHVALQRGHLRERDEVVQHRVDPEP*GLPRSGRHDEPDAQVQDQGARAQRVLGR 684
P +REVVH+AL RGHLRERDEVVQH VD EP GL R + EPDA + QG R QRVLGR
Sbjct: 6 PRVREVVHLALHRGHLRERDEVVQHGVDAEPRGLRRRRQDAEPDAAARHQGPRPQRVLGR 185
Query: 685 PELADAVGEAPQPCAAQGSHAEAAQVRRVTLRRQGHPLGRGEREPALQLLRDEAGPHGVG 864
PELAD VG+A QPC AQG H EA QVRR+ LRRQG PLGR +REP LQLLRD+A P VG
Sbjct: 186 PELADEVGDAAQPCPAQGGHPEAPQVRRLPLRRQGDPLGRRQREPPLQLLRDQARPRRVG 365
Query: 865 TDLPAGGAAGPQCHPIHERIQHAGAARRSQPCARQVRGQDEPD 993
DLPAGGAAGPQ P+HER+QHAGAARR QP A VRG+D+ D
Sbjct: 366 ADLPAGGAAGPQPDPLHERVQHAGAARRPQPNAGPVRGEDDTD 494
Score = 90.4 bits (191), Expect(2) = 6e-027
Identities = 42/78 (53%), Positives = 45/78 (57%)
Frame = +3 / +2
Query: 723 LRSSRQPCRSGSSPSCHPTPAXXXXXXXXXXXXXXXXXXXXWAPWRRHRSTSRWGSWTAM 902
L SSR+P RS SSPS TPA AP RR RS+SRWGSWTA
Sbjct: 224 LPSSRRPSRSASSPSSPATPAR*STGTSSTRTSTSTSSRPS*APARRRRSSSRWGSWTAT 403
Query: 903 PSYS*TNSTRWSSPAIPT 956
S S*T+STRWSSPA PT
Sbjct: 404 RSSS*TSSTRWSSPATPT 457
Score = 74.8 bits (157), Expect(3) = 5e-033
Identities = 34/47 (72%), Positives = 36/47 (76%)
Frame = -3 / -1
Query: 652 DLVLAHQVHHGVRNAVVLMVLGPLGAVPLHLVLEGGHAEARREPLLV 512
D V HQ H V +AVVL+VL PL AVPLHLVLEGGH EAR EPLLV
Sbjct: 153 DAVPLHQAQHLVGDAVVLVVLRPLRAVPLHLVLEGGHGEARGEPLLV 13
Score = 72.5 bits (152), Expect(3) = 5e-033
Identities = 31/40 (77%), Positives = 31/40 (77%)
Frame = -2 / -3
Query: 977 PRTWRAQGWDRRAAPAC*IRS*IGWHCGPAAPPAGRSVPT 858
PRT A GW RRAAPAC* RS* G CGPAAPPAGRS PT
Sbjct: 478 PRTGPALGWGRRAAPAC*TRS*RGSGCGPAAPPAGRSAPT 359
Score = 53.3 bits (110), Expect(2) = 6e-027
Identities = 25/35 (71%), Positives = 26/35 (74%)
Frame = +3 / +2
Query: 543 WPPSRTR*SGTAPSGPRTMRTTAFRTP**T*CAST 647
WPPSRTR*SGTA SG RT RTTA T * *C+ T
Sbjct: 44 WPPSRTR*SGTARSGRRTTRTTASPTRC*A*CSGT 148
Score = 34.5 bits (69), Expect(3) = 5e-033
Identities = 17/26 (65%), Positives = 17/26 (65%)
Frame = -3 / -1
Query: 793 DDLAGVG*HDGLEPLLHGCLELRKVE 716
D LAGV DGLE LL G LEL K E
Sbjct: 294 DHLAGVAGDDGLEALLDGRLELGKAE 217
>gb|CW333040.1|CW333040 104_830_11481731_148_36039_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481731, DNA
sequence
Length = 692
Score = 350 bits (759), Expect(3) = 1e-099
Identities = 141/163 (86%), Positives = 154/163 (94%)
Frame = +2 / +1
Query: 989 QIRGYAGNGGLKLGVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDVVKSPNQVKYL 1168
QIR Y GNGGLKLGVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDVVK PNQVK L
Sbjct: 1 QIRSYPGNGGLKLGVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDVVKGPNQVKNL 180
Query: 1169 EQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKTHRASA 1348
EQVLREG+ HP V+GIVMWAAWHA+GCYVMCLTDNSFKNLPVGD+VDKLIAEWKTHRASA
Sbjct: 181 EQVLREGYGHPGVNGIVMWAAWHAKGCYVMCLTDNSFKNLPVGDVVDKLIAEWKTHRASA 360
Query: 1349 TTDHNGAVELHLPLGDFKFTVSHPSLKAAAVQTMTVDNSASAS 1477
TTD +GAVEL LPLG++KFTV HPSLKAAAVQT+TVD+++S++
Sbjct: 361 TTDRDGAVELDLPLGEYKFTVRHPSLKAAAVQTVTVDDTSSSA 489
Score = 264 bits (572), Expect(3) = 3e-074
Identities = 115/161 (71%), Positives = 126/161 (78%)
Frame = -3 / -3
Query: 1474 RRRRIVDGHGLNSSGFQRWVAYGELKVA*GQVELHRPIVIGGGGRAVRLPLGDELVDEVA 1295
RRR +VDGHGLN S FQR V+YGEL +A*GQ+ELHRPI +GGGGRAVRLPL DELVD+VA
Sbjct: 486 RRRSVVDGHGLNRSSFQRRVSYGELILA*GQIELHRPIAVGGGGRAVRLPLRDELVDDVA 307
Query: 1294 HGEVLEAVVREAHDVAAPGMPRCPHDDAVDVGVGEAFPEHLLQVLDLVGALDDIHLGEPH 1115
GEVLEAVVREAHDVAA G+PR PHDDA+D GV FPEHLLQVL LVG+LDDIHLGEPH
Sbjct: 306 DGEVLEAVVREAHDVAALGVPRRPHDDAIDAGVSVPFPEHLLQVLHLVGSLDDIHLGEPH 127
Query: 1114 GQLQLGERVQRAPHVRDVGCXXXXXXXXXXXXXXXAGVAAD 992
QL+L +RVQRAPHVRDV AGVA D
Sbjct: 126 RQLELRQRVQRAPHVRDVRRAEVALQSDAELQSAIAGVAPD 4
Score = 233 bits (504), Expect(2) = 3e-063
Identities = 108/142 (76%), Positives = 110/142 (77%)
Frame = -1 / -1
Query: 1470 DAELSTVMV*TAAAFKDGWLTVNLKSPRGRWSSTAPL*SVVADARCVFHSAMSLSTRSPT 1291
D STV V*TAAAF DG LTVNL SPRGR SSTAP SVVADARCVFHSAMSLST SPT
Sbjct: 482 DEVSSTVTV*TAAAFSDGCLTVNLYSPRGRSSSTAPSRSVVADARCVFHSAMSLSTTSPT 303
Query: 1290 GRFLKLLSVRHMT*QPLACHAAHMTMPSTLGWAKPSLSTCSRYXXXXXXXXXXXXXSHMG 1111
GRFLKLLSVRHMT*QPLACHAAHMTMP T G PSLSTCSR+ SH+G
Sbjct: 302 GRFLKLLSVRHMT*QPLACHAAHMTMPLTPGCPYPSLSTCSRFFTWLGPLTTSTSVSHIG 123
Query: 1110 SFSLASVSSELLMYGMLGVLKW 1045
S S ASVSSELLMYGM GVLKW
Sbjct: 122 SLSFASVSSELLMYGMFGVLKW 57
Score = 124 bits (265), Expect(2) = 4e-042
Identities = 55/92 (59%), Positives = 61/92 (66%)
Frame = +1 / +3
Query: 1222 VGSVACQGLLRHVPHGQQLQEXXXXXXXXXXXXXVEDAPRVRHHRSQWGGGAPPAPRRL* 1401
VG VA QGLLRHVPHGQQLQE VEDAPRVRHHR +WGGGA APRR+*
Sbjct: 234 VGGVARQGLLRHVPHGQQLQEPPRRRRRRQAHRGVEDAPRVRHHRPRWGGGARSAPRRV* 413
Query: 1402 VHRKPPIFESRCCSNHDRRQFGVGVPAYHQRQ 1497
VHRK P+ ES C SN DRR+ V H ++
Sbjct: 414 VHRKTPVAESCCGSNRDRRRHFVVGVGVHHQR 509
Score = 70.3 bits (147), Expect(2) = 4e-042
Identities = 29/56 (51%), Positives = 30/56 (53%)
Frame = +3 / +2
Query: 1074 *GARWTRXXXXXXXXXXXRWMSSRAPTRSSTWSRCSGKXXXXXXXXXXXCGQRGMP 1241
*GARWTR RWMSSR PTR TWSRCSGK CG+RG P
Sbjct: 86 *GARWTRWRSSSCRCGSPRWMSSRDPTR*RTWSRCSGKGTDTPASMASSCGRRGTP 253
Score = 33.6 bits (67), Expect(3) = 3e-074
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -2 / -2
Query: 1535 RSATECLMSSPRT*R*WYAGTPTPNCRR 1452
R+A +PRT*R*W TPT CRR
Sbjct: 550 RTARIVACMAPRT*R*W*TPTPTTKCRR 467
Score = 32.2 bits (64), Expect(3) = 1e-099
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1 / +3
Query: 1453 RRQFGVGVPAYHQRQVLG 1506
RR F VGV +HQRQVLG
Sbjct: 468 RRHFVVGVGVHHQRQVLG 521
Score = 31.3 bits (62), Expect(2) = 3e-063
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -3 / -3
Query: 1507 LLGLDVDGMLGRRRRIV 1457
LLGLDVDG L RRRR V
Sbjct: 522 LLGLDVDGELRRRRRSV 472
Score = 23.1 bits (44), Expect(3) = 1e-099
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 1550 LYFSFW*INR 1579
L+ SFW*INR
Sbjct: 586 LFLSFW*INR 615
Score = 22.1 bits (42), Expect(3) = 3e-074
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -3
Query: 1622 CHVSFPS 1602
CHVSFPS
Sbjct: 657 CHVSFPS 637
>gb|CW316897.1|CW316897 104_808_11473132_116_35854_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473132, DNA
sequence
Length = 666
Score = 295 bits (639), Expect = 1e-078
Identities = 119/221 (53%), Positives = 156/221 (70%)
Frame = +2 / -2
Query: 332 DEWDGHTRRSADKVRRRTVKGGAMGANDKPMAHANVSIELLRLGFPFGNAITKEILGLPA 511
+EW H + R++TV+ A ++ KP+ A V IE +R GFP G+A++ EIL PA
Sbjct: 665 EEWAAHHHAPSKSARKKTVRLRARDSSGKPVPGAQVRIEHVRSGFPLGSAMSAEILQSPA 486
Query: 512 YEKWFTSRFSVATFENEMKWYSTEWTQNHEDYRVPDAMMNLMRKYKIKVRGHNVFWDDQN 691
Y++WFTSRF+V TFENEMKWYSTE Q EDY VPDAM+ + + + VRGHNVFWD +
Sbjct: 485 YQRWFTSRFTVTTFENEMKWYSTERVQGREDYSVPDAMLRFAKSHGVAVRGHNVFWDQPS 306
Query: 692 SQMQWVKPLNLAQLKAAMQKRLKSVVSPYAGKVIHWDVVNENLHFNFFETKLGPMASAQI 871
Q WV+ L+ QL+ A +R+KSV+S YAG+VI WDVVNENLHFN+FE K G ASA+
Sbjct: 305 QQPSWVRSLSYQQLQQATARRIKSVMSRYAGQVIAWDVVNENLHFNYFEGKFGWDASAEF 126
Query: 872 YQQVGQLDRNAILFMNEFNTLEQPGDPNPVPAKYVAKMNQI 994
Y++ QLD A++ MNE+NTLE PGDP P+KY+ K+ QI
Sbjct: 125 YRKAHQLDAQALMSMNEYNTLEWPGDPMAGPSKYLGKLFQI 3
Score = 169 bits (363), Expect = 1e-040
Identities = 94/221 (42%), Positives = 111/221 (50%)
Frame = +1 / -1
Query: 331 RRVGRSHPPLRRQGPPANREGGRHGRQRQADGACQREHRAPPPRLPVRQRDHQGDPRPPG 510
R VG + P + G + R G +A HRA P RLP +GDP PG
Sbjct: 666 RGVGGAPPRAIKVGAQEDGAAPRQGLVGEARAGRAGAHRARPERLPAGVCHERGDPAEPG 487
Query: 511 IREVVHVALQRGHLRERDEVVQHRVDPEP*GLPRSGRHDEPDAQVQDQGARAQRVLGRPE 690
+ VVHVA+ H+RERDEVVQH GL R + + +GAR QRVLG E
Sbjct: 486 VPAVVHVAVHGDHVRERDEVVQHGAGAGAGGLLGPRRDAAVRQEPRRRGARPQRVLGPAE 307
Query: 691 LADAVGEAPQPCAAQGSHAEAAQVRRVTLRRQGHPLGRGEREPALQLLRDEAGPHGVGTD 870
A +G AA A QV V +RR G +GRGEREP LQLLR + VG
Sbjct: 306 PAAVLGAVAVVPAAPAGDGAADQVGDVAVRRAGDRVGRGEREPPLQLLRGQVRVGRVGGV 127
Query: 871 LPAGGAAGPQCHPIHERIQHAGAARRSQPCARQVRGQDEPD 993
LP G AG +HER+QHAG ARR A QV GQ PD
Sbjct: 126 LPQGAPAGRAGAHVHERVQHAGVARRPDGRAEQVPGQAVPD 4
Score = 98.7 bits (209), Expect(2) = 3e-039
Identities = 54/105 (51%), Positives = 61/105 (58%)
Frame = -1 / +1
Query: 696 CEFWSSQNTLCPRTLILYLRIRFIMASGTR*SSWFWVHSVLYHFISFSKVATLKRDVNHF 517
C SQNTL PRT +L +ASGT *SS SVLYHFISFS V T+ RDVNH
Sbjct: 301 CWLGWSQNTLWPRTATPWLLANRSIASGTE*SSRPCTRSVLYHFISFSNVVTVNRDVNHR 480
Query: 516 SYAGRPRISLVIALPNGKPRRRSSMLTLACAIGLSLAPMAPPFTV 382
YAG RIS ++A P+GKP R SM T A G +A TV
Sbjct: 481 WYAGLCRISALMADPSGKPLRTCSMRTCAPGTGFPDESLARSRTV 615
Score = 86.3 bits (182), Expect(2) = 3e-039
Identities = 47/89 (52%), Positives = 52/89 (58%)
Frame = -1 / +1
Query: 993 IWFILATYLAGTGLGSPGCSSVLNSFMNRMALRSSCPTCW*ICADAMGPSFVSKKLKCRF 814
IW L YL G +GSPG SSVL SFM+ A SS * ADA P+ SK LK RF
Sbjct: 4 IWNSLPRYLLGPAIGSPGHSSVLYSFMDMSACASSWCALR*NSADASHPNLPSK*LKWRF 183
Query: 813 SFTTSQWMTLPA*GDTTDLSRFCMAALSC 727
SFTTS +T PA D TDL R +A SC
Sbjct: 184 SFTTSHAITCPAYRDITDLIRRAVACWSC 270
>gb|BZ338080.1|BZ338080 ia92h04.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ia92h04 5', DNA sequence
Length = 658
Score = 140 bits (301), Expect(3) = 3e-076
Identities = 55/63 (87%), Positives = 59/63 (93%)
Frame = +2 / +2
Query: 407 ANDKPMAHANVSIELLRLGFPFGNAITKEILGLPAYEKWFTSRFSVATFENEMKWYSTEW 586
A+ KP+AHANVSIELLR+GFPFGNA TKEI LPAYEKWFTSRF+VATFENEMKWYSTEW
Sbjct: 470 ADGKPIAHANVSIELLRMGFPFGNAATKEITELPAYEKWFTSRFTVATFENEMKWYSTEW 649
Query: 587 TQN 595
TQN
Sbjct: 650 TQN 658
Score = 121 bits (259), Expect(4) = 2e-066
Identities = 53/63 (84%), Positives = 55/63 (87%)
Frame = -1 / -2
Query: 594 FWVHSVLYHFISFSKVATLKRDVNHFSYAGRPRISLVIALPNGKPRRRSSMLTLACAIGL 415
F VHSVLYHFISFSKVAT+KR+VNHFSYAG ISLV ALPNGKP RRSSMLTLACAIGL
Sbjct: 657 FCVHSVLYHFISFSKVATVKREVNHFSYAGSSVISLVAALPNGKPMRRSSMLTLACAIGL 478
Query: 414 SLA 406
A
Sbjct: 477 PSA 469
Score = 114 bits (244), Expect(3) = 4e-049
Identities = 48/63 (76%), Positives = 51/63 (80%)
Frame = +1 / +1
Query: 406 RQRQADGACQREHRAPPPRLPVRQRDHQGDPRPPGIREVVHVALQRGHLRERDEVVQHRV 585
R+RQAD A QREHRAPP PVRQR HQGD R P +REVVH+AL RGHLRERDEVVQH V
Sbjct: 469 RRRQADRARQREHRAPPHGFPVRQRGHQGDHRAPRVREVVHLALHRGHLRERDEVVQHGV 648
Query: 586 DPE 594
D E
Sbjct: 649 DAE 657
Score = 100 bits (214), Expect(3) = 3e-076
Identities = 42/49 (85%), Positives = 46/49 (93%)
Frame = +2 / +1
Query: 128 TSAHVRAVIKSPNGERVIAGAIVAQSGCWSMLKGGMTAYSSGPAEIYFE 274
+SAHVRA+IKSPNGERVIAGAI A+SGCWSMLKGGMT+ SSG AEIYFE
Sbjct: 79 SSAHVRAIIKSPNGERVIAGAIDAKSGCWSMLKGGMTSDSSGHAEIYFE 225
Score = 96.4 bits (204), Expect(3) = 4e-049
Identities = 38/47 (80%), Positives = 38/47 (80%)
Frame = +1 / +3
Query: 130 VGTCEGGDQVPQRRTRHRWCHRCPVGLLEHAQGRHDRLLFGTRRDLL 270
VG CEG QVP RR RHRWCHRC V LLEHAQGRHD LFGTRRDLL
Sbjct: 81 VGPCEGDHQVP*RRARHRWCHRCQVRLLEHAQGRHDL*LFGTRRDLL 221
Score = 92.3 bits (195), Expect(4) = 2e-066
Identities = 40/49 (81%), Positives = 41/49 (83%)
Frame = -3 / -2
Query: 274 LKVDLCGSRRVSGHASLEHAPAARLGNDGTSDDAFAVGGLDHRPHMCRR 128
L+VDLC SRRV GHASLEHAPAA LG DGTSDDA AV GLD RPHM RR
Sbjct: 225 LEVDLCVSRRVRGHASLEHAPAAGLGIDGTSDDALAVRGLDDRPHMGRR 79
Score = 90.0 bits (190), Expect(3) = 3e-052
Identities = 43/63 (68%), Positives = 44/63 (69%)
Frame = -3 / -1
Query: 595 VLGPLGAVPLHLVLEGGHAEARREPLLVCREAEDLLGDRVXXXXXXXXELDAHVGMRHRL 416
VL PL AVPLHLVLEGGH EAR EPLLV E DLLG RV ELDAHVG+R RL
Sbjct: 658 VLRPLRAVPLHLVLEGGHGEARGEPLLVRGELGDLLGGRVAERETHAEELDAHVGVRDRL 479
Query: 415 VVG 407
VG
Sbjct: 478 AVG 470
Score = 87.2 bits (184), Expect(3) = 3e-052
Identities = 40/48 (83%), Positives = 42/48 (87%)
Frame = -1 / -3
Query: 273 SK*ISAGPEE*AVMPPLSMLQQPDWATMAPAMTRSPLGDLITALTCAD 130
SK*ISA PEE VMPPLSMLQQPD A+MAPAMTRSPLGDL+ ALT AD
Sbjct: 224 SK*ISACPEESEVMPPLSMLQQPDLASMAPAMTRSPLGDLMIALTWAD 81
Score = 87.2 bits (184), Expect(3) = 2e-037
Identities = 42/54 (77%), Positives = 44/54 (81%)
Frame = +3 / +2
Query: 114 RCRTARRHM*GR*SSPPTANASSLVPSLPSRAAGACSREA*PLTLRDPQRSTLR 275
R RR M*GR SSP TA+ASSLVPS+PS AAGACSREA*PLTLRD QRST R
Sbjct: 65 RMARRRRPM*GRSSSPLTASASSLVPSMPSPAAGACSREA*PLTLRDTQRSTSR 226
Score = 85.8 bits (181), Expect(3) = 3e-076
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +2 / +2
Query: 272 ESHAPVDIWVDSVSLQPFTFDEWDGHTRRSADKVRRRTVK 391
+SHA VDIWVDSVSLQPFTFDEWD H RRSA K RRRTVK
Sbjct: 329 QSHAAVDIWVDSVSLQPFTFDEWDAHARRSAAKSRRRTVK 448
Score = 75.8 bits (159), Expect(4) = 2e-066
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = -1 / -2
Query: 390 FTVRRRTLSAERRV*PSHSSKVKGCSETLSTQMSTGAWL 274
FTVRRR L+AERR SHSSKVKGCS+TLSTQMST AWL
Sbjct: 447 FTVRRRDLAAERRAWASHSSKVKGCSDTLSTQMSTAAWL 331
Score = 72.1 bits (151), Expect(3) = 2e-037
Identities = 33/62 (53%), Positives = 38/62 (61%)
Frame = +1 / +1
Query: 274 EPRTS*HLGGQCLAAALHLRRVGRSHPPLRRQGPPANREGGRHGRQRQADGACQREHRAP 453
EPR+ HLGGQ + AALHLRRVGR P LRRQ P ANREGG +R+ R+
Sbjct: 331 EPRSCGHLGGQRVTAALHLRRVGRPRPALRRQVPSANREGGGRHGRRRRQADRARQREHR 510
Query: 454 PP 459
P
Sbjct: 511 AP 516
Score = 69.8 bits (146), Expect(3) = 3e-052
Identities = 31/44 (70%), Positives = 32/44 (72%)
Frame = -3 / -1
Query: 391 LHGSPADLVGGAAGVTVPLVEGEGLQRDTVHPDVNWCVALKVDL 260
LHGSP L GGA GV VPLVEGEGLQ VHPDV+ CVAL L
Sbjct: 448 LHGSPTGLGGGAPGVGVPLVEGEGLQ*HAVHPDVHSCVALHARL 317
Score = 37.3 bits (75), Expect(3) = 2e-037
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3 / +3
Query: 543 WPPSRTR*SGTAPSGPR 593
WPPSRTR*SGTA SG R
Sbjct: 606 WPPSRTR*SGTARSGRR 656
Score = 25.4 bits (49), Expect(3) = 4e-049
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3 / +3
Query: 273 RATHQLTSGWTVSRC 317
RAT TSGWT C
Sbjct: 330 RATQLWTSGWTACHC 374
Score = 23.1 bits (44), Expect(4) = 2e-066
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2 / -3
Query: 413 RWRPWRPP 390
R RPWRPP
Sbjct: 473 RRRPWRPP 450
>gb|CW143318.1|CW143318 104_535_11137350_116_34953_029 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137350, DNA
sequence
Length = 622
Score = 196 bits (423), Expect(2) = 2e-073
Identities = 72/127 (56%), Positives = 99/127 (77%)
Frame = +2 / -3
Query: 899 NAILFMNEFNTLEQPGDPNPVPAKYVAKMNQIRGYAGNGGLKLGVGLESHFSTPNIPYMR 1078
+A++F+NE+NTLEQPGD +PA+Y+ ++ QI G + +GLE HF+ PNIPYMR
Sbjct: 383 SALMFLNEYNTLEQPGDMAALPARYLQRLQQIIAAYPENGAGMAIGLEGHFTKPNIPYMR 204
Query: 1079 SSLDTLAKLKLPMWLTEVDVVKSPNQVKYLEQVLREGFAHPNVDGIVMWAAWHARGCYVM 1258
++LDTLA+ +P+WLTEVDV P+Q ++LE+VLRE +AHP V GIV+W+AW +GCYVM
Sbjct: 203 AALDTLAQAGIPVWLTEVDVAPGPSQAQHLEEVLREAYAHPAVQGIVIWSAWQPQGCYVM 24
Query: 1259 CLTDNSF 1279
CLTDN+F
Sbjct: 23 CLTDNNF 3
Score = 102 bits (217), Expect(2) = 2e-073
Identities = 43/82 (52%), Positives = 53/82 (64%)
Frame = +2 / -3
Query: 665 HNVFWDDQNSQMQWVKPLNLAQLKAAMQKRLKSVVSPYAGKVIHWDVVNENLHFNFFETK 844
HNVFWD + Q WV+ L QL AA +R++SV+S YAG+VI WDVVNENLHFNF+E +
Sbjct: 620 HNVFWDQPSQQPGWVQSLPYPQLLAAASRRIRSVMSRYAGQVIGWDVVNENLHFNFYEGR 441
Query: 845 LGPMASAQIYQQVGQLDRNAIL 910
G AS Y LD + L
Sbjct: 440 FGWDASTAFYAAARLLDTGSAL 375
Score = 77.6 bits (163), Expect(3) = 8e-031
Identities = 38/74 (51%), Positives = 44/74 (59%)
Frame = -3 / +3
Query: 1279 EAVVREAHDVAAPGMPRCPHDDAVDVGVGEAFPEHLLQVLDLVGALDDIHLGEPHGQLQL 1100
E VV EAHDVA +PR P DD + V P+HLLQVL L A D+ LGEP G L
Sbjct: 3 EVVVGEAHDVAPLRLPRRPDDDPLHRRVRVRLPQHLLQVLRLRRAWGDVDLGEPDGDAGL 182
Query: 1099 GERVQRAPHVRDVG 1058
+ V+R HV DVG
Sbjct: 183 RQCVERGAHVGDVG 224
Score = 66.1 bits (138), Expect(5) = 2e-024
Identities = 33/57 (57%), Positives = 35/57 (61%)
Frame = +1 / -2
Query: 667 QRVLGRPELADAVGEAPQPCAAQGSHAEAAQVRRVTLRRQGHPLGRGEREPALQLLR 837
QRVLG E A VG AA G A +R V LRR GH LGRG+REPALQLLR
Sbjct: 618 QRVLGPAEPAARVGAVASLPAAAGGGVAADPLRHVALRRPGHRLGRGQREPALQLLR 448
Score = 59.7 bits (124), Expect(3) = 8e-031
Identities = 35/65 (53%), Positives = 36/65 (55%)
Frame = -1 / +1
Query: 861 DAMGPSFVSKKLKCRFSFTTSQWMTLPA*GDTTDLSRFCMAALSCARLRGFTHCICEFWS 682
DA P S KLKCRFS TTSQ MT PA* D T+ R AA SC TH C
Sbjct: 424 DASQPKRPS*KLKCRFSLTTSQPMTWPA*RDMTERIRRDAAASSCG*GSDCTHPGCWLGW 603
Query: 681 SQNTL 667
SQNTL
Sbjct: 604 SQNTL 618
Score = 37.3 bits (75), Expect(3) = 8e-031
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -1 / +1
Query: 972 YLAGTGLGSPGCSSVLNSFMNRMA 901
YLAG+ SPGCSSVL SF N A
Sbjct: 310 YLAGSAAMSPGCSSVLYSFKNMSA 381
Score = 33.6 bits (67), Expect(5) = 2e-024
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1 / -2
Query: 1231 VACQGLLRHVPHGQQLQ 1281
VA G+LRHVPH QQLQ
Sbjct: 51 VAAAGVLRHVPHRQQLQ 1
Score = 29.9 bits (59), Expect(5) = 2e-024
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3 / -1
Query: 1128 RWMSSRAPTRSSTWSRCSGKXXXXXXXXXXXCGQRG 1235
R S +A R STW RC G+ G+RG
Sbjct: 154 RSTSPQARRRRSTWRRCCGRRTRTRRCRGSSSGRRG 47
Score = 29.5 bits (58), Expect(5) = 2e-024
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1 / -2
Query: 1048 LQHTQHPVHEELAGHARQAEAAHVAHRG 1131
L QHP+H A H +AHRG
Sbjct: 234 LHQAQHPLHARRARHTGAGRHPRLAHRG 151
Score = 27.2 bits (53), Expect(5) = 2e-024
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1 / -2
Query: 916 ERIQHAGAARRSQPCARQV 972
ER+QHAGAA R A QV
Sbjct: 366 ERVQHAGAAGRHGRAAGQV 310
>gb|CW130722.1|CW130722 104_513_11115274_148_34777_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11115274, DNA
sequence
Length = 632
Score = 223 bits (481), Expect(2) = 1e-068
Identities = 83/146 (56%), Positives = 110/146 (75%)
Frame = +2 / -2
Query: 1022 KLGVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDVVKSPNQVKYLEQVLREGFAHP 1201
++ +GLE HFS P+IPY+R++LDT++K P+WLTE+DV PNQ YLEQ+LRE +AHP
Sbjct: 484 RMAIGLEGHFSVPSIPYIRAALDTMSKANAPIWLTEIDVAPGPNQAHYLEQILREVYAHP 305
Query: 1202 NVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKTHRASATTDHNGAVELH 1381
V GI++W A H +GCYVMCLTD++F+NLP GD+VDKLIAEWKTH + D +G E
Sbjct: 304 AVHGIILWTARHPQGCYVMCLTDSNFRNLPTGDVVDKLIAEWKTHSHAGVADADGYYEAE 125
Query: 1382 LPLGDFKFTVSHPSLKAAAVQTMTVD 1459
L GD+K TVSHP + VQ+++VD
Sbjct: 124 LFHGDYKVTVSHPVANSTVVQSLSVD 47
Score = 129 bits (277), Expect(2) = 1e-035
Identities = 69/139 (49%), Positives = 74/139 (53%)
Frame = -1 / +3
Query: 1461 LSTVMV*TAAAFKDGWLTVNLKSPRGRWSSTAPL*SVVADARCVFHSAMSLSTRSPTGRF 1282
LST+ + T GWLTV L SP +S P S CVFHSAMSLST SP GRF
Sbjct: 45 LSTLRLCTTVELATGWLTVTL*SPWNSSAS*YPSASATPACECVFHSAMSLSTTSPVGRF 224
Query: 1281 LKLLSVRHMT*QPLACHAAHMTMPSTLGWAKPSLSTCSRYXXXXXXXXXXXXXSHMGSFS 1102
LKLLSVRHMT* P A MP T G A SLS CSR S MG+ +
Sbjct: 225 LKLLSVRHMT*HPCGWRAVQRMMPCTAGCAYTSLSICSR*CAWLGPGATSISVSQMGALA 404
Query: 1101 LASVSSELLMYGMLGVLKW 1045
L VSS M GMLG KW
Sbjct: 405 LDMVSSAARM*GMLGTEKW 461
Score = 116 bits (247), Expect(2) = 4e-026
Identities = 63/134 (47%), Positives = 77/134 (57%)
Frame = -3 / +2
Query: 1459 VDGHGLNSSGFQRWVAYGELKVA*GQVELHRPIVIGGGGRAVRLPLGDELVDEVAHGEVL 1280
VD L+ G VA G+L V Q+ L + + G VRLPL DELVD+VA G V
Sbjct: 47 VDAQALHHGGVGHRVADGDLVVPVEQLGLVVSVGVRHAGVRVRLPLRDELVDDVARG*VP 226
Query: 1279 EAVVREAHDVAAPGMPRCPHDDAVDVGVGEAFPEHLLQVLDLVGALDDIHLGEPHGQLQL 1100
E V EAHDVA+ + R P DDAV V PE+LLQV+ LVG D+ LG+P G++ L
Sbjct: 227 EVAVGEAHDVASLRVARRPEDDAVHGRVRVHLPEYLLQVVRLVGPRRDVDLGQPDGRVGL 406
Query: 1099 GERVQRAPHVRDVG 1058
G VQR V D G
Sbjct: 407 GHGVQRRADVGDAG 448
Score = 60.2 bits (125), Expect(2) = 1e-068
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +2 / -2
Query: 887 QLDRNAILFMNEFNTLEQPGDPNPVPAKYVAKMNQIRGYAGN 1012
QLD A++ MNE+NTLE PGDP P+KY+ K+ QI+ + GN
Sbjct: 622 QLDAQALMSMNEYNTLEWPGDPMAGPSKYLGKLFQIKKFPGN 497
Score = 42.8 bits (87), Expect(2) = 1e-035
Identities = 20/35 (57%), Positives = 22/35 (62%)
Frame = -1 / +3
Query: 993 IWFILATYLAGTGLGSPGCSSVLNSFMNRMALRSS 889
IW L YL G +GSPG SSVL SFM+ A SS
Sbjct: 516 IWNSLPRYLLGPAIGSPGHSSVLYSFMDMSACASS 620
Score = 24.9 bits (48), Expect(2) = 4e-026
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3 / +2
Query: 949 IAGLLQRVEFVHE*DGIAVQLPHL 878
+AG LQRV VH + + VQL L
Sbjct: 560 VAGPLQRVVLVHGHERLRVQLVRL 631
>gb|CW327128.1|CW327128 104_822_11478580_148_35969_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478580, DNA
sequence
Length = 587
Score = 223 bits (481), Expect(2) = 5e-068
Identities = 83/146 (56%), Positives = 110/146 (75%)
Frame = +2 / -2
Query: 1022 KLGVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDVVKSPNQVKYLEQVLREGFAHP 1201
++ +GLE HFS P+IPY+R++LDT++K P+WLTE+DV PNQ YLEQ+LRE +AHP
Sbjct: 451 RMAIGLEGHFSVPSIPYIRAALDTMSKANAPIWLTEIDVAPGPNQAHYLEQILREVYAHP 272
Query: 1202 NVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKTHRASATTDHNGAVELH 1381
V GI++W A H +GCYVMCLTD++F+NLP GD+VDKLIAEWKTH + D +G E
Sbjct: 271 AVHGIILWTARHPQGCYVMCLTDSNFRNLPTGDVVDKLIAEWKTHSHAGVADADGYYEAE 92
Query: 1382 LPLGDFKFTVSHPSLKAAAVQTMTVD 1459
L GD+K TVSHP + VQ+++VD
Sbjct: 91 LFHGDYKVTVSHPVANSTVVQSLSVD 14
Score = 129 bits (277), Expect(2) = 1e-035
Identities = 69/139 (49%), Positives = 74/139 (53%)
Frame = -1 / +3
Query: 1461 LSTVMV*TAAAFKDGWLTVNLKSPRGRWSSTAPL*SVVADARCVFHSAMSLSTRSPTGRF 1282
LST+ + T GWLTV L SP +S P S CVFHSAMSLST SP GRF
Sbjct: 12 LSTLRLCTTVELATGWLTVTL*SPWNSSAS*YPSASATPACECVFHSAMSLSTTSPVGRF 191
Query: 1281 LKLLSVRHMT*QPLACHAAHMTMPSTLGWAKPSLSTCSRYXXXXXXXXXXXXXSHMGSFS 1102
LKLLSVRHMT* P A MP T G A SLS CSR S MG+ +
Sbjct: 192 LKLLSVRHMT*HPCGWRAVQRMMPCTAGCAYTSLSICSR*CAWLGPGATSISVSQMGALA 371
Query: 1101 LASVSSELLMYGMLGVLKW 1045
L VSS M GMLG KW
Sbjct: 372 LDMVSSAARM*GMLGTEKW 428
Score = 116 bits (247), Expect(2) = 2e-025
Identities = 63/134 (47%), Positives = 77/134 (57%)
Frame = -3 / +2
Query: 1459 VDGHGLNSSGFQRWVAYGELKVA*GQVELHRPIVIGGGGRAVRLPLGDELVDEVAHGEVL 1280
VD L+ G VA G+L V Q+ L + + G VRLPL DELVD+VA G V
Sbjct: 14 VDAQALHHGGVGHRVADGDLVVPVEQLGLVVSVGVRHAGVRVRLPLRDELVDDVARG*VP 193
Query: 1279 EAVVREAHDVAAPGMPRCPHDDAVDVGVGEAFPEHLLQVLDLVGALDDIHLGEPHGQLQL 1100
E V EAHDVA+ + R P DDAV V PE+LLQV+ LVG D+ LG+P G++ L
Sbjct: 194 EVAVGEAHDVASLRVARRPEDDAVHGRVRVHLPEYLLQVVRLVGPRRDVDLGQPDGRVGL 373
Query: 1099 GERVQRAPHVRDVG 1058
G VQR V D G
Sbjct: 374 GHGVQRRADVGDAG 415
Score = 57.9 bits (120), Expect(2) = 5e-068
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +2 / -2
Query: 890 LDRNAILFMNEFNTLEQPGDPNPVPAKYVAKMNQIRGYAGN 1012
LD A++ MNE+NTLE PGDP P+KY+ K+ QI+ + GN
Sbjct: 586 LDAQALMSMNEYNTLEWPGDPMAGPSKYLGKLFQIKKFPGN 464
Score = 42.8 bits (87), Expect(2) = 1e-035
Identities = 20/35 (57%), Positives = 22/35 (62%)
Frame = -1 / +3
Query: 993 IWFILATYLAGTGLGSPGCSSVLNSFMNRMALRSS 889
IW L YL G +GSPG SSVL SFM+ A SS
Sbjct: 483 IWNSLPRYLLGPAIGSPGHSSVLYSFMDMSACASS 587
Score = 22.1 bits (42), Expect(2) = 2e-025
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3 / +2
Query: 949 IAGLLQRVEFVHE*DGIAVQ 890
+AG LQRV VH + + VQ
Sbjct: 527 VAGPLQRVVLVHGHERLRVQ 586
>gb|BG048470.1|BG048470 OV1_13_H08.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 638
Score = 256 bits (554), Expect = 7e-067
Identities = 101/163 (61%), Positives = 122/163 (74%)
Frame = +2 / +3
Query: 989 QIRGYAGNGGLKLGVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDVVKSPNQVKYL 1168
QI+ Y GN LK G+GLESHF+ PNIPYMR SLDTLA K+P+WLTEVDV K P QV++L
Sbjct: 3 QIQSYPGNEDLKYGIGLESHFAKPNIPYMRGSLDTLAAAKVPIWLTEVDVTKGPKQVEFL 182
Query: 1169 EQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKTHRASA 1348
E+V+REGF HP V GIVMWAAWHA+GCYVMCLTDN+FKNLP GDLVD+L+ EW+
Sbjct: 183 EEVMREGFGHPGVKGIVMWAAWHAKGCYVMCLTDNNFKNLPQGDLVDRLLDEWRKVPEKP 362
Query: 1349 TTDHNGAVELHLPLGDFKFTVSHPSLKAAAVQTMTVDNSASAS 1477
TD NG E L G+++ TV H SLK VQT+ +D + A+
Sbjct: 363 MTDSNGVFEAELFHGEYQVTVKHASLKEPIVQTVDLDTKSEAA 491
Score = 150 bits (323), Expect = 5e-035
Identities = 75/139 (53%), Positives = 84/139 (60%)
Frame = -1 / -2
Query: 1461 LSTVMV*TAAAFKDGWLTVNLKSPRGRWSSTAPL*SVVADARCVFHSAMSLSTRSPTGRF 1282
+S V T + D LTV SP +S PL SV+ + HS+ SLSTRSP GRF
Sbjct: 475 VSRSTVCTMGSLSDACLTVTWYSPWKSSASNTPLLSVMGFSGTFLHSSRSLSTRSPCGRF 296
Query: 1281 LKLLSVRHMT*QPLACHAAHMTMPSTLGWAKPSLSTCSRYXXXXXXXXXXXXXSHMGSFS 1102
LKLLSVRHMT*QPLAC AAHMTMP T GW PSL T SR S MG+ +
Sbjct: 295 LKLLSVRHMT*QPLACQAAHMTMPLTPGWPNPSLITSSRNSTCLGPLVTSTSVSQMGTLA 116
Query: 1101 LASVSSELLMYGMLGVLKW 1045
ASVSSE LM GMLG+ KW
Sbjct: 115 AASVSSEPLMXGMLGLAKW 59
Score = 136 bits (292), Expect = 9e-031
Identities = 70/143 (48%), Positives = 85/143 (59%)
Frame = -3 / -1
Query: 1486 GMLGRRRRIVDGHGLNSSGFQRWVAYGELKVA*GQVELHRPIVIGGGGRAVRLPLGDELV 1307
G+ G R V+ H L+ +R V G+L +A ++ L I + G PL E V
Sbjct: 500 GLYGGLRFGVEVHRLHDGLLERRVLDGDLVLAVEELGLEHTIAVRHGLLGHLPPLVQEPV 321
Query: 1306 DEVAHGEVLEAVVREAHDVAAPGMPRCPHDDAVDVGVGEAFPEHLLQVLDLVGALDDIHL 1127
DEV +VLE VV EAHDVAA G+P PHDDA+D V E P HLLQ L L+G L D+HL
Sbjct: 320 DEVPLRQVLEVVVGEAHDVAALGVPGRPHDDALDARVAEPLPHHLLQELHLLGPLGDVHL 141
Query: 1126 GEPHGQLQLGERVQRAPHVRDVG 1058
GEP G L +RVQ APHV DVG
Sbjct: 140 GEPDGHLGRRQRVQ*APHVXDVG 72
>gb|CW031197.1|CW031197 104_259_10500664_116_30398 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500664, DNA
sequence
Length = 765
Score = 209 bits (450), Expect(2) = 2e-066
Identities = 82/189 (43%), Positives = 121/189 (64%)
Frame = +2 / -3
Query: 431 ANVSIELLRLGFPFGNAITKEILGLPAYEKWFTSRFSVATFENEMKWYSTEWTQNHEDYR 610
A+VS++ FP G+AI ILG AY++WF RF+ A FE+E+KWYSTE +
Sbjct: 736 ASVSVQQTAKDFPIGSAIASTILGNQAYQQWFVDRFNAAVFEDELKWYSTEPMSGLLRFD 557
Query: 611 VPDAMMNLMRKYKIKVRGHNVFWDDQNSQMQWVKPLNLAQLKAAMQKRLKSVVSPYAGKV 790
VPD M+ +R +++ VRGHN+FW++Q++ +WVK L L++A+ R++S+++ Y G+
Sbjct: 556 VPDQMLAFVRSHRVMVRGHNIFWENQDATPRWVKNLTADDLRSAVNTRIQSLMTRYRGEF 377
Query: 791 IHWDVVNENLHFNFFETKLGPMASAQIYQQVGQLDRNAILFMNEFNTLEQPGDPNPVPAK 970
HWDV NE LH+NF+E +LGP AS + D A LFMNE+N +E DP
Sbjct: 376 AHWDVNNEMLHYNFYEQRLGPNASMDFFSVAQDADPLATLFMNEYNVMETCDDPLSTVDT 197
Query: 971 YVAKMNQIR 997
YVAK+ ++R
Sbjct: 196 YVAKLKELR 170
Score = 67.0 bits (140), Expect(2) = 2e-066
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +2 / -3
Query: 989 QIRGYAGNGGLKLGVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDV 1138
+++ G + G+GLE HFS PNIP MR+ LD LA L LP+W TE+D+
Sbjct: 187 KLKELRSGGAILEGIGLEGHFSKPNIPLMRAILDKLATLGLPIWFTEIDI 38
>gb|CW143319.1|CW143319 104_535_11137350_148_34957_029 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137350, DNA
sequence
Length = 705
Score = 253 bits (547), Expect = 6e-066
Identities = 108/213 (50%), Positives = 139/213 (65%)
Frame = +2 / +2
Query: 272 ESHAPVDIWVDSVSLQPFTFDEWDGHTRRSADKVRRRTVKGGAMGANDKPMAHANVSIEL 451
+S+A VD+WVDSVSL+PF+ DEW H +S R++TV+ A + P+ A VS++
Sbjct: 59 QSNATVDLWVDSVSLKPFSKDEWTAHRAQSVVAARKKTVRLQATDSAGNPLEGAAVSLDA 238
Query: 452 LRLGFPFGNAITKEILGLPAYEKWFTSRFSVATFENEMKWYSTEWTQNHEDYRVPDAMMN 631
+R FP G A+++ IL AY+ WF SRF+VATFENEMKWYSTE EDY VPDAMM
Sbjct: 239 VRTNFPLGAAVSRYILTNSAYQTWFASRFAVATFENEMKWYSTEPAPGREDYTVPDAMMA 418
Query: 632 LMRKYKIKVRGHNVFWDDQNSQMQWVKPLNLAQLKAAMQKRLKSVVSPYAGKVIHWDVVN 811
+ I VRGHNVFWD + Q WV+ L QL AA +R++SV+S YAG+VI WDVVN
Sbjct: 419 FAKSNGIAVRGHNVFWDQPSQQPGWVQSLPYPQLLAAASRRIRSVMSRYAGQVIGWDVVN 598
Query: 812 ENLHFNFFETKLGPMASAQIYQQVGQLDRNAIL 910
ENLH +F+E + G AS Y LD + L
Sbjct: 599 ENLHXHFYEGRFGWDASTAFYAAARLLDTGSAL 697
Score = 151 bits (325), Expect = 3e-035
Identities = 95/198 (47%), Positives = 107/198 (54%)
Frame = -1 / -1
Query: 861 DAMGPSFVSKKLKCRFSFTTSQWMTLPA*GDTTDLSRFCMAALSCARLRGFTHCICEFWS 682
DA P S K KCRFS TTSQ MT PA* D T+ R AA SC TH C
Sbjct: 648 DASQPKRPS*KXKCRFSLTTSQPMTWPA*RDMTERIRRDAAASSCG*GSDCTHPGCWLGW 469
Query: 681 SQNTLCPRTLILYLRIRFIMASGTR*SSWFWVHSVLYHFISFSKVATLKRDVNHFSYAGR 502
SQNTL PRT + IMASGT *SS SVLYHFISFSKVAT KRD NH YA
Sbjct: 468 SQNTLWPRTAMPLDLANAIMASGTV*SSRPGAGSVLYHFISFSKVATAKRDANHVWYAEL 289
Query: 501 PRISLVIALPNGKPRRRSSMLTLACAIGLSLAPMAPPFTVRRRTLSAERRV*PSHSSKVK 322
R+ + A P+GK R +S T A + G +A TV R + + HSS K
Sbjct: 288 VRMYRLTAAPSGKLVRTASRDTAAPSSGFPAESVA*SLTVFLRAATTDWARCAVHSSLEK 109
Query: 321 GCSETLSTQMSTGAWLSK 268
G S+TLST ST A L +
Sbjct: 108 GFSDTLSTHRSTVALLCR 55
Score = 111 bits (238), Expect(2) = 1e-024
Identities = 60/128 (46%), Positives = 69/128 (53%)
Frame = +1 / +1
Query: 454 PPRLPVRQRDHQGDPRPPGIREVVHVALQRGHLRERDEVVQHRVDPEP*GLPRSGRHDEP 633
P +LP + G+ +VV V L+ GHLRERDEVVQH GL GRHD
Sbjct: 241 PDQLPAGRGREPVHSHQLGVPDVVRVPLRGGHLRERDEVVQHGAGAGARGLHGPGRHDGV 420
Query: 634 DAQVQDQGARAQRVLGRPELADAVGEAPQPCAAQGSHAEAAQVRRVTLRRQGHPLGRGER 813
+ + AR QRVLG E A VG AA G A +R V LRR GH LGRG+R
Sbjct: 421 RQVQRHRRARPQRVLGPAEPAARVGAVASLPAAAGGGVAADPLRHVALRRPGHRLGRGQR 600
Query: 814 EPALQLLR 837
EPAL LLR
Sbjct: 601 EPALXLLR 624
Score = 24.0 bits (46), Expect(2) = 1e-024
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1 / +1
Query: 274 EPRTS*HLGGQCLAAALHLRRVGRSHPPLRRQGPPANREGGRHGRQRQADG 426
E R +GGQ +A AL RV + P+R G + E G + ++ G
Sbjct: 61 EQRYGGPVGGQRVAEALLQGRVDGAPCPVRGGGAQEDGEASGDGLRGESAG 213
>gb|CW333039.1|CW333039 104_830_11481731_116_36040_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481731, DNA
sequence
Length = 649
Score = 226 bits (487), Expect(3) = 2e-062
Identities = 89/108 (82%), Positives = 102/108 (94%)
Frame = +2 / -1
Query: 1154 QVKYLEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKT 1333
QVK LEQVLREG+ HP V+GIVMWAAWHA+GCYVMCLTDNSFKNLPVGD+VDKLIAEWKT
Sbjct: 649 QVKNLEQVLREGYGHPGVNGIVMWAAWHAKGCYVMCLTDNSFKNLPVGDVVDKLIAEWKT 470
Query: 1334 HRASATTDHNGAVELHLPLGDFKFTVSHPSLKAAAVQTMTVDNSASAS 1477
HRASATTD +GAVEL LPLG++KFTV HPSLKAAAVQT+TVD+++S++
Sbjct: 469 HRASATTDRDGAVELDLPLGEYKFTVRHPSLKAAAVQTVTVDDTSSSA 326
Score = 199 bits (428), Expect(3) = 1e-054
Identities = 84/107 (78%), Positives = 92/107 (85%)
Frame = -3 / +2
Query: 1474 RRRRIVDGHGLNSSGFQRWVAYGELKVA*GQVELHRPIVIGGGGRAVRLPLGDELVDEVA 1295
RRR +VDGHGLN S FQR V+YGEL +A*GQ+ELHRPI +GGGGRAVRLPL DELVD+VA
Sbjct: 329 RRRSVVDGHGLNRSSFQRRVSYGELILA*GQIELHRPIAVGGGGRAVRLPLRDELVDDVA 508
Query: 1294 HGEVLEAVVREAHDVAAPGMPRCPHDDAVDVGVGEAFPEHLLQVLDL 1154
GEVLEAVVREAHDVAA G+PR PHDDA+D GV FPEHLLQVL L
Sbjct: 509 DGEVLEAVVREAHDVAALGVPRRPHDDAIDAGVSVPFPEHLLQVLHL 649
Score = 188 bits (404), Expect(2) = 2e-049
Identities = 86/103 (83%), Positives = 87/103 (84%)
Frame = -1 / +3
Query: 1470 DAELSTVMV*TAAAFKDGWLTVNLKSPRGRWSSTAPL*SVVADARCVFHSAMSLSTRSPT 1291
D STV V*TAAAF DG LTVNL SPRGR SSTAP SVVADARCVFHSAMSLST SPT
Sbjct: 333 DEVSSTVTV*TAAAFSDGCLTVNLYSPRGRSSSTAPSRSVVADARCVFHSAMSLSTTSPT 512
Query: 1290 GRFLKLLSVRHMT*QPLACHAAHMTMPSTLGWAKPSLSTCSRY 1162
GRFLKLLSVRHMT*QPLACHAAHMTMP T G PSLSTCSR+
Sbjct: 513 GRFLKLLSVRHMT*QPLACHAAHMTMPLTPGCPYPSLSTCSRF 641
Score = 124 bits (265), Expect(2) = 1e-032
Identities = 55/92 (59%), Positives = 61/92 (66%)
Frame = +1 / -3
Query: 1222 VGSVACQGLLRHVPHGQQLQEXXXXXXXXXXXXXVEDAPRVRHHRSQWGGGAPPAPRRL* 1401
VG VA QGLLRHVPHGQQLQE VEDAPRVRHHR +WGGGA APRR+*
Sbjct: 581 VGGVARQGLLRHVPHGQQLQEPPRRRRRRQAHRGVEDAPRVRHHRPRWGGGARSAPRRV* 402
Query: 1402 VHRKPPIFESRCCSNHDRRQFGVGVPAYHQRQ 1497
VHRK P+ ES C SN DRR+ V H ++
Sbjct: 401 VHRKTPVAESCCGSNRDRRRHFVVGVGVHHQR 306
Score = 38.2 bits (77), Expect(2) = 1e-032
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3 / -2
Query: 1164 TWSRCSGKXXXXXXXXXXXCGQRGMP 1241
TWSRCSGK CG+RG P
Sbjct: 639 TWSRCSGKGTDTPASMASSCGRRGTP 562
Score = 33.6 bits (67), Expect(3) = 1e-054
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -2 / +1
Query: 1535 RSATECLMSSPRT*R*WYAGTPTPNCRR 1452
R+A +PRT*R*W TPT CRR
Sbjct: 265 RTARIVACMAPRT*R*W*TPTPTTKCRR 348
Score = 32.2 bits (64), Expect(3) = 2e-062
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1 / -3
Query: 1453 RRQFGVGVPAYHQRQVLG 1506
RR F VGV +HQRQVLG
Sbjct: 347 RRHFVVGVGVHHQRQVLG 294
Score = 31.3 bits (62), Expect(2) = 2e-049
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -3 / +2
Query: 1507 LLGLDVDGMLGRRRRIV 1457
LLGLDVDG L RRRR V
Sbjct: 293 LLGLDVDGELRRRRRSV 343
Score = 23.1 bits (44), Expect(3) = 2e-062
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / -1
Query: 1550 LYFSFW*INR 1579
L+ SFW*INR
Sbjct: 229 LFLSFW*INR 200
Score = 22.1 bits (42), Expect(3) = 1e-054
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / +2
Query: 1622 CHVSFPS 1602
CHVSFPS
Sbjct: 158 CHVSFPS 178
>gb|BZ334942.1|BZ334942 hx94e04.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx94e04 5', DNA sequence
Length = 698
Score = 223 bits (482), Expect(3) = 9e-062
Identities = 88/108 (81%), Positives = 101/108 (93%)
Frame = +2 / +3
Query: 1154 QVKYLEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKT 1333
QVK LE VLREG+ HP V+GIVMWAAWHA+GCYVMCLTDNSFKNLPVGD+VDKLIAEWKT
Sbjct: 3 QVKNLEHVLREGYGHPGVNGIVMWAAWHAKGCYVMCLTDNSFKNLPVGDVVDKLIAEWKT 182
Query: 1334 HRASATTDHNGAVELHLPLGDFKFTVSHPSLKAAAVQTMTVDNSASAS 1477
HRASATTD +GAVEL LPLG++KFTV HPSLKAAAVQT+TVD+++S++
Sbjct: 183 HRASATTDRDGAVELDLPLGEYKFTVRHPSLKAAAVQTVTVDDTSSSA 326
Score = 197 bits (425), Expect(3) = 4e-054
Identities = 83/107 (77%), Positives = 92/107 (85%)
Frame = -3 / -1
Query: 1474 RRRRIVDGHGLNSSGFQRWVAYGELKVA*GQVELHRPIVIGGGGRAVRLPLGDELVDEVA 1295
RRR +VDGHGLN S FQR V+YGEL +A*GQ+ELHRPI +GGGGRAVRLPL DELVD+VA
Sbjct: 323 RRRSVVDGHGLNRSSFQRRVSYGELILA*GQIELHRPIAVGGGGRAVRLPLRDELVDDVA 144
Query: 1294 HGEVLEAVVREAHDVAAPGMPRCPHDDAVDVGVGEAFPEHLLQVLDL 1154
GEVLEAVVREAHDVAA G+PR PHDDA+D GV FPEH+LQVL L
Sbjct: 143 DGEVLEAVVREAHDVAALGVPRRPHDDAIDAGVSVPFPEHVLQVLHL 3
Score = 188 bits (404), Expect(2) = 2e-049
Identities = 86/103 (83%), Positives = 87/103 (84%)
Frame = -1 / -2
Query: 1470 DAELSTVMV*TAAAFKDGWLTVNLKSPRGRWSSTAPL*SVVADARCVFHSAMSLSTRSPT 1291
D STV V*TAAAF DG LTVNL SPRGR SSTAP SVVADARCVFHSAMSLST SPT
Sbjct: 319 DEVSSTVTV*TAAAFSDGCLTVNLYSPRGRSSSTAPSRSVVADARCVFHSAMSLSTTSPT 140
Query: 1290 GRFLKLLSVRHMT*QPLACHAAHMTMPSTLGWAKPSLSTCSRY 1162
GRFLKLLSVRHMT*QPLACHAAHMTMP T G PSLSTCSR+
Sbjct: 139 GRFLKLLSVRHMT*QPLACHAAHMTMPLTPGCPYPSLSTCSRF 11
Score = 124 bits (265), Expect(2) = 2e-032
Identities = 55/92 (59%), Positives = 61/92 (66%)
Frame = +1 / +2
Query: 1222 VGSVACQGLLRHVPHGQQLQEXXXXXXXXXXXXXVEDAPRVRHHRSQWGGGAPPAPRRL* 1401
VG VA QGLLRHVPHGQQLQE VEDAPRVRHHR +WGGGA APRR+*
Sbjct: 71 VGGVARQGLLRHVPHGQQLQEPPRRRRRRQAHRGVEDAPRVRHHRPRWGGGARSAPRRV* 250
Query: 1402 VHRKPPIFESRCCSNHDRRQFGVGVPAYHQRQ 1497
VHRK P+ ES C SN DRR+ V H ++
Sbjct: 251 VHRKTPVAESCCGSNRDRRRHFVVGVGVHHQR 346
Score = 37.7 bits (76), Expect(2) = 2e-032
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3 / +1
Query: 1152 TRSSTWSRCSGKXXXXXXXXXXXCGQRGMP 1241
TR TWS CSGK CG+RG P
Sbjct: 1 TR*RTWSTCSGKGTDTPASMASSCGRRGTP 90
Score = 33.6 bits (67), Expect(3) = 4e-054
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -2 / -3
Query: 1535 RSATECLMSSPRT*R*WYAGTPTPNCRR 1452
R+A +PRT*R*W TPT CRR
Sbjct: 387 RTARIVACMAPRT*R*W*TPTPTTKCRR 304
Score = 32.2 bits (64), Expect(3) = 9e-062
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1 / +2
Query: 1453 RRQFGVGVPAYHQRQVLG 1506
RR F VGV +HQRQVLG
Sbjct: 305 RRHFVVGVGVHHQRQVLG 358
Score = 31.3 bits (62), Expect(2) = 2e-049
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -3 / -1
Query: 1507 LLGLDVDGMLGRRRRIV 1457
LLGLDVDG L RRRR V
Sbjct: 359 LLGLDVDGELRRRRRSV 309
Score = 23.1 bits (44), Expect(3) = 9e-062
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 1550 LYFSFW*INR 1579
L+ SFW*INR
Sbjct: 423 LFLSFW*INR 452
Score = 22.1 bits (42), Expect(3) = 4e-054
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -1
Query: 1622 CHVSFPS 1602
CHVSFPS
Sbjct: 494 CHVSFPS 474
>gb|CW327127.1|CW327127 104_822_11478580_116_35968_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478580, DNA
sequence
Length = 497
Score = 142 bits (305), Expect(2) = 5e-061
Identities = 50/83 (60%), Positives = 66/83 (79%)
Frame = +2 / +1
Query: 1022 KLGVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDVVKSPNQVKYLEQVLREGFAHP 1201
++ +GLE HFS P+IPY+R++LDT++K P+WLTE+DV PNQ YLEQ+LRE +AHP
Sbjct: 247 RMAIGLEGHFSVPSIPYIRAALDTMSKANAPIWLTEIDVAPGPNQAHYLEQILREVYAHP 426
Query: 1202 NVDGIVMWAAWHARGCYVMCLTD 1270
V GI++W A H +GCYVMCLTD
Sbjct: 427 AVHGIILWTARHPQGCYVMCLTD 495
Score = 115 bits (245), Expect(2) = 5e-061
Identities = 46/78 (58%), Positives = 59/78 (75%)
Frame = +2 / +1
Query: 779 AGKVIHWDVVNENLHFNFFETKLGPMASAQIYQQVGQLDRNAILFMNEFNTLEQPGDPNP 958
AG+VI WDVVNENLHFN+FE K G ASA+ Y++ QLD A++ MNE+NTLE PGDP
Sbjct: 1 AGQVIAWDVVNENLHFNYFEGKFGWDASAEFYRKAHQLDAQALMSMNEYNTLEWPGDPMA 180
Query: 959 VPAKYVAKMNQIRGYAGN 1012
P+KY+ K+ QI+ + GN
Sbjct: 181 GPSKYLGKLFQIKKFPGN 234
Score = 79.4 bits (167), Expect(4) = 3e-024
Identities = 38/71 (53%), Positives = 42/71 (59%)
Frame = +1 / +3
Query: 781 RQGHPLGRGEREPALQLLRDEAGPHGVGTDLPAGGAAGPQCHPIHERIQHAGAARRSQPC 960
R G +GRGEREP LQLLR + VG LP G AG +HER+QHAG ARR
Sbjct: 3 RAGDRVGRGEREPPLQLLRGQVRVGRVGGVLPQGAPAGRAGAHVHERVQHAGVARRPDGR 182
Query: 961 ARQVRGQDEPD 993
A QV GQ PD
Sbjct: 183 AEQVPGQAVPD 215
Score = 73.5 bits (154), Expect(2) = 4e-027
Identities = 36/71 (50%), Positives = 44/71 (61%)
Frame = -3 / -3
Query: 1270 VREAHDVAAPGMPRCPHDDAVDVGVGEAFPEHLLQVLDLVGALDDIHLGEPHGQLQLGER 1091
V EAHDVA+ + R P DDAV V PE+LLQV+ LVG D+ LG+P G++ LG
Sbjct: 495 VGEAHDVASLRVARRPEDDAVHGRVRVHLPEYLLQVVRLVGPRRDVDLGQPDGRVGLGHG 316
Query: 1090 VQRAPHVRDVG 1058
VQR V D G
Sbjct: 315 VQRRADVGDAG 283
Score = 70.7 bits (148), Expect(2) = 4e-027
Identities = 38/71 (53%), Positives = 42/71 (59%)
Frame = -1 / -1
Query: 993 IWFILATYLAGTGLGSPGCSSVLNSFMNRMALRSSCPTCW*ICADAMGPSFVSKKLKCRF 814
IW L YL G +GSPG SSVL SFM+ A SS * ADA P+ SK LK RF
Sbjct: 215 IWNSLPRYLLGPAIGSPGHSSVLYSFMDMSACASSWCALR*NSADASHPNLPSK*LKWRF 36
Query: 813 SFTTSQWMTLP 781
SFTTS +T P
Sbjct: 35 SFTTSHAITCP 3
Score = 33.1 bits (66), Expect(4) = 3e-024
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1 / +3
Query: 1048 LQHTQHPVHEELAGHARQAEAAHVAHR 1128
L QHP+H AGH Q + AH+A R
Sbjct: 273 LLRAQHPLHPRGAGHHVQGQRAHLADR 353
Score = 32.2 bits (64), Expect(4) = 3e-024
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3 / +2
Query: 1128 RWMSSRAPTRSSTWSRCSGKXXXXXXXXXXXCGQR 1232
R S R PTR +TWSR SG+ G+R
Sbjct: 353 RSTSRRGPTRRTTWSRYSGRCTRTRPCTASSSGRR 457
Score = 24.4 bits (47), Expect(4) = 3e-024
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 1243 GLLRHVPHGQ 1272
G+LRHVPH Q
Sbjct: 468 GMLRHVPHRQ 497
>gb|CW126732.1|CW126732 104_507_11113054_148_34731_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113054, DNA
sequence
Length = 453
Score = 220 bits (475), Expect(3) = 8e-061
Identities = 86/104 (82%), Positives = 99/104 (95%)
Frame = +2 / -3
Query: 1166 LEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKTHRAS 1345
LEQVLREG+ HP V+GIVMWAAWHA+GCYVMCLTDNSFKNLPVGD+VDKLIAEWKTHRAS
Sbjct: 448 LEQVLREGYGHPGVNGIVMWAAWHAKGCYVMCLTDNSFKNLPVGDVVDKLIAEWKTHRAS 269
Query: 1346 ATTDHNGAVELHLPLGDFKFTVSHPSLKAAAVQTMTVDNSASAS 1477
ATTD +GAVEL LPLG++KFTV HPSLKAAAVQT+TVD+++S++
Sbjct: 268 ATTDRDGAVELDLPLGEYKFTVRHPSLKAAAVQTVTVDDTSSSA 137
Score = 195 bits (421), Expect(2) = 2e-052
Identities = 82/104 (78%), Positives = 90/104 (86%)
Frame = -3 / +2
Query: 1474 RRRRIVDGHGLNSSGFQRWVAYGELKVA*GQVELHRPIVIGGGGRAVRLPLGDELVDEVA 1295
RRR +VDGHGLN S FQR V+YGEL +A*GQ+ELHRPI +GGGGRAVRLPL DELVD+VA
Sbjct: 140 RRRSVVDGHGLNRSSFQRRVSYGELILA*GQIELHRPIAVGGGGRAVRLPLRDELVDDVA 319
Query: 1294 HGEVLEAVVREAHDVAAPGMPRCPHDDAVDVGVGEAFPEHLLQV 1163
GEVLEAVVREAHDVAA G+PR PHDDA+D GV FPEHLLQV
Sbjct: 320 DGEVLEAVVREAHDVAALGVPRRPHDDAIDAGVSVPFPEHLLQV 451
Score = 188 bits (404), Expect(2) = 2e-049
Identities = 86/103 (83%), Positives = 87/103 (84%)
Frame = -1 / +3
Query: 1470 DAELSTVMV*TAAAFKDGWLTVNLKSPRGRWSSTAPL*SVVADARCVFHSAMSLSTRSPT 1291
D STV V*TAAAF DG LTVNL SPRGR SSTAP SVVADARCVFHSAMSLST SPT
Sbjct: 144 DEVSSTVTV*TAAAFSDGCLTVNLYSPRGRSSSTAPSRSVVADARCVFHSAMSLSTTSPT 323
Query: 1290 GRFLKLLSVRHMT*QPLACHAAHMTMPSTLGWAKPSLSTCSRY 1162
GRFLKLLSVRHMT*QPLACHAAHMTMP T G PSLSTCSR+
Sbjct: 324 GRFLKLLSVRHMT*QPLACHAAHMTMPLTPGCPYPSLSTCSRF 452
Score = 124 bits (265), Expect(2) = 1e-032
Identities = 55/92 (59%), Positives = 61/92 (66%)
Frame = +1 / -2
Query: 1222 VGSVACQGLLRHVPHGQQLQEXXXXXXXXXXXXXVEDAPRVRHHRSQWGGGAPPAPRRL* 1401
VG VA QGLLRHVPHGQQLQE VEDAPRVRHHR +WGGGA APRR+*
Sbjct: 392 VGGVARQGLLRHVPHGQQLQEPPRRRRRRQAHRGVEDAPRVRHHRPRWGGGARSAPRRV* 213
Query: 1402 VHRKPPIFESRCCSNHDRRQFGVGVPAYHQRQ 1497
VHRK P+ ES C SN DRR+ V H ++
Sbjct: 212 VHRKTPVAESCCGSNRDRRRHFVVGVGVHHQR 117
Score = 38.2 bits (77), Expect(2) = 1e-032
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3 / -1
Query: 1164 TWSRCSGKXXXXXXXXXXXCGQRGMP 1241
TWSRCSGK CG+RG P
Sbjct: 450 TWSRCSGKGTDTPASMASSCGRRGTP 373
Score = 33.6 bits (67), Expect(2) = 2e-052
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -2 / +1
Query: 1535 RSATECLMSSPRT*R*WYAGTPTPNCRR 1452
R+A +PRT*R*W TPT CRR
Sbjct: 76 RTARIVACMAPRT*R*W*TPTPTTKCRR 159
Score = 32.2 bits (64), Expect(3) = 8e-061
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1 / -2
Query: 1453 RRQFGVGVPAYHQRQVLG 1506
RR F VGV +HQRQVLG
Sbjct: 158 RRHFVVGVGVHHQRQVLG 105
Score = 31.3 bits (62), Expect(2) = 2e-049
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -3 / +2
Query: 1507 LLGLDVDGMLGRRRRIV 1457
LLGLDVDG L RRRR V
Sbjct: 104 LLGLDVDGELRRRRRSV 154
Score = 23.1 bits (44), Expect(3) = 8e-061
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / -3
Query: 1550 LYFSFW*INR 1579
L+ SFW*INR
Sbjct: 40 LFLSFW*INR 11
>gb|CF487663.1|CF487663 POL1_45_E01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_45_E01_A002 3', mRNA sequence
Length = 589
Score = 217 bits (468), Expect(3) = 7e-060
Identities = 86/106 (81%), Positives = 98/106 (92%)
Frame = +2 / +3
Query: 1160 KYLEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKTHR 1339
K LEQVLREG+ HP V+GIVMWAAWHA+GCYVMCLTDNSFKNLPV D+VDKLIAEWKTHR
Sbjct: 3 KNLEQVLREGYGHPGVNGIVMWAAWHAKGCYVMCLTDNSFKNLPVRDVVDKLIAEWKTHR 182
Query: 1340 ASATTDHNGAVELHLPLGDFKFTVSHPSLKAAAVQTMTVDNSASAS 1477
ASATTD +GAVEL LPLG++KFTV HPSLKAAAVQT TVD+++S++
Sbjct: 183 ASATTDRDGAVELDLPLGEYKFTVRHPSLKAAAVQTATVDDTSSSA 320
Score = 192 bits (414), Expect(3) = 1e-052
Identities = 81/105 (77%), Positives = 90/105 (85%)
Frame = -3 / -3
Query: 1474 RRRRIVDGHGLNSSGFQRWVAYGELKVA*GQVELHRPIVIGGGGRAVRLPLGDELVDEVA 1295
RRR +VDG GLN S FQR V+YGEL +A*GQ+ELHRPI +GGGGRAVRLPL DELVD+V
Sbjct: 317 RRRSVVDGRGLNRSSFQRRVSYGELILA*GQIELHRPIAVGGGGRAVRLPLRDELVDDVP 138
Query: 1294 HGEVLEAVVREAHDVAAPGMPRCPHDDAVDVGVGEAFPEHLLQVL 1160
+GEVLEAVVREAHDVAA G+PR PHDDA+D GV FPEHLLQVL
Sbjct: 137 NGEVLEAVVREAHDVAALGVPRRPHDDAIDAGVSVPFPEHLLQVL 3
Score = 183 bits (395), Expect(2) = 3e-048
Identities = 85/103 (82%), Positives = 86/103 (83%)
Frame = -1 / -1
Query: 1470 DAELSTVMV*TAAAFKDGWLTVNLKSPRGRWSSTAPL*SVVADARCVFHSAMSLSTRSPT 1291
D STV V*TAAAF DG LTVNL SPRGR SSTAP SVVADARCVFHSAMSLST S T
Sbjct: 313 DEVSSTVAV*TAAAFSDGCLTVNLYSPRGRSSSTAPSRSVVADARCVFHSAMSLSTTSRT 134
Query: 1290 GRFLKLLSVRHMT*QPLACHAAHMTMPSTLGWAKPSLSTCSRY 1162
GRFLKLLSVRHMT*QPLACHAAHMTMP T G PSLSTCSR+
Sbjct: 133 GRFLKLLSVRHMT*QPLACHAAHMTMPLTPGCPYPSLSTCSRF 5
Score = 124 bits (266), Expect(2) = 1e-032
Identities = 55/92 (59%), Positives = 61/92 (66%)
Frame = +1 / +2
Query: 1222 VGSVACQGLLRHVPHGQQLQEXXXXXXXXXXXXXVEDAPRVRHHRSQWGGGAPPAPRRL* 1401
VG VA QGLLRHVPHGQQLQE VEDAPRVRHHR +WGGGA APRR+*
Sbjct: 65 VGGVARQGLLRHVPHGQQLQEPPRSGRRRQAHRGVEDAPRVRHHRPRWGGGARSAPRRV* 244
Query: 1402 VHRKPPIFESRCCSNHDRRQFGVGVPAYHQRQ 1497
VHRK P+ ES C SN DRR+ V H ++
Sbjct: 245 VHRKTPVAESCCGSNRDRRRHFVVGVGVHHQR 340
Score = 38.2 bits (77), Expect(2) = 1e-032
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3 / +1
Query: 1164 TWSRCSGKXXXXXXXXXXXCGQRGMP 1241
TWSRCSGK CG+RG P
Sbjct: 7 TWSRCSGKGTDTPASMASSCGRRGTP 84
Score = 33.6 bits (67), Expect(3) = 1e-052
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -2 / -2
Query: 1535 RSATECLMSSPRT*R*WYAGTPTPNCRR 1452
R+A +PRT*R*W TPT CRR
Sbjct: 381 RTARIVACMAPRT*R*W*TPTPTTKCRR 298
Score = 32.2 bits (64), Expect(3) = 7e-060
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1 / +2
Query: 1453 RRQFGVGVPAYHQRQVLG 1506
RR F VGV +HQRQVLG
Sbjct: 299 RRHFVVGVGVHHQRQVLG 352
Score = 31.3 bits (62), Expect(2) = 3e-048
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -3 / -3
Query: 1507 LLGLDVDGMLGRRRRIV 1457
LLGLDVDG L RRRR V
Sbjct: 353 LLGLDVDGELRRRRRSV 303
Score = 23.1 bits (44), Expect(3) = 7e-060
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 1550 LYFSFW*INR 1579
L+ SFW*INR
Sbjct: 417 LFLSFW*INR 446
Score = 22.1 bits (42), Expect(3) = 1e-052
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -3
Query: 1622 CHVSFPS 1602
CHVSFPS
Sbjct: 488 CHVSFPS 468
>gb|CW119865.1|CW119865 104_497_11109005_148_34646_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11109005, DNA
sequence
Length = 718
Score = 100 bits (214), Expect(3) = 2e-058
Identities = 42/49 (85%), Positives = 46/49 (93%)
Frame = +2 / -1
Query: 128 TSAHVRAVIKSPNGERVIAGAIVAQSGCWSMLKGGMTAYSSGPAEIYFE 274
+SAHVRA+IKSPNGERVIAGAI A+SGCWSMLKGGMT+ SSG AEIYFE
Sbjct: 508 SSAHVRAIIKSPNGERVIAGAIDAKSGCWSMLKGGMTSDSSGHAEIYFE 362
Score = 96.4 bits (204), Expect(2) = 2e-034
Identities = 38/47 (80%), Positives = 38/47 (80%)
Frame = +1 / -3
Query: 130 VGTCEGGDQVPQRRTRHRWCHRCPVGLLEHAQGRHDRLLFGTRRDLL 270
VG CEG QVP RR RHRWCHRC V LLEHAQGRHD LFGTRRDLL
Sbjct: 506 VGPCEGDHQVP*RRARHRWCHRCQVRLLEHAQGRHDL*LFGTRRDLL 366
Score = 92.3 bits (195), Expect(4) = 1e-051
Identities = 40/49 (81%), Positives = 41/49 (83%)
Frame = -3 / +2
Query: 274 LKVDLCGSRRVSGHASLEHAPAARLGNDGTSDDAFAVGGLDHRPHMCRR 128
L+VDLC SRRV GHASLEHAPAA LG DGTSDDA AV GLD RPHM RR
Sbjct: 362 LEVDLCVSRRVRGHASLEHAPAAGLGIDGTSDDALAVRGLDDRPHMGRR 508
Score = 87.2 bits (184), Expect(3) = 3e-039
Identities = 40/48 (83%), Positives = 42/48 (87%)
Frame = -1 / +3
Query: 273 SK*ISAGPEE*AVMPPLSMLQQPDWATMAPAMTRSPLGDLITALTCAD 130
SK*ISA PEE VMPPLSMLQQPD A+MAPAMTRSPLGDL+ ALT AD
Sbjct: 363 SK*ISACPEESEVMPPLSMLQQPDLASMAPAMTRSPLGDLMIALTWAD 506
Score = 87.2 bits (184), Expect(3) = 2e-032
Identities = 42/54 (77%), Positives = 44/54 (81%)
Frame = +3 / -2
Query: 114 RCRTARRHM*GR*SSPPTANASSLVPSLPSRAAGACSREA*PLTLRDPQRSTLR 275
R RR M*GR SSP TA+ASSLVPS+PS AAGACSREA*PLTLRD QRST R
Sbjct: 522 RMARRRRPM*GRSSSPLTASASSLVPSMPSPAAGACSREA*PLTLRDTQRSTSR 361
Score = 85.8 bits (181), Expect(3) = 2e-058
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +2 / -2
Query: 272 ESHAPVDIWVDSVSLQPFTFDEWDGHTRRSADKVRRRTVK 391
+SHA VDIWVDSVSLQPFTFDEWD H RRSA K RRRTVK
Sbjct: 258 QSHAAVDIWVDSVSLQPFTFDEWDAHARRSAAKSRRRTVK 139
Score = 80.8 bits (170), Expect(3) = 2e-058
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2 / -2
Query: 407 ANDKPMAHANVSIELLRLGFPFGNAITKEILGLPAYEKW 523
A+ KP+AHANVSIELLR+GFPFGNA TKEI LPAYEKW
Sbjct: 117 ADGKPIAHANVSIELLRMGFPFGNAATKEITELPAYEKW 1
Score = 75.8 bits (159), Expect(4) = 1e-051
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = -1 / +2
Query: 390 FTVRRRTLSAERRV*PSHSSKVKGCSETLSTQMSTGAWL 274
FTVRRR L+AERR SHSSKVKGCS+TLSTQMST AWL
Sbjct: 140 FTVRRRDLAAERRAWASHSSKVKGCSDTLSTQMSTAAWL 256
Score = 72.1 bits (151), Expect(2) = 2e-034
Identities = 33/62 (53%), Positives = 38/62 (61%)
Frame = +1 / -1
Query: 274 EPRTS*HLGGQCLAAALHLRRVGRSHPPLRRQGPPANREGGRHGRQRQADGACQREHRAP 453
EPR+ HLGGQ + AALHLRRVGR P LRRQ P ANREGG +R+ R+
Sbjct: 256 EPRSCGHLGGQRVTAALHLRRVGRPRPALRRQVPSANREGGGRHGRRRRQADRARQREHR 77
Query: 454 PP 459
P
Sbjct: 76 AP 71
Score = 72.1 bits (151), Expect(4) = 1e-051
Identities = 32/39 (82%), Positives = 32/39 (82%)
Frame = -1 / +2
Query: 522 HFSYAGRPRISLVIALPNGKPRRRSSMLTLACAIGLSLA 406
HFSYAG ISLV ALPNGKP RRSSMLTLACAIGL A
Sbjct: 2 HFSYAGSSVISLVAALPNGKPMRRSSMLTLACAIGLPSA 118
Score = 69.8 bits (146), Expect(3) = 3e-039
Identities = 31/44 (70%), Positives = 32/44 (72%)
Frame = -3 / +1
Query: 391 LHGSPADLVGGAAGVTVPLVEGEGLQRDTVHPDVNWCVALKVDL 260
LHGSP L GGA GV VPLVEGEGLQ VHPDV+ CVAL L
Sbjct: 139 LHGSPTGLGGGAPGVGVPLVEGEGLQ*HAVHPDVHSCVALHARL 270
Score = 67.5 bits (141), Expect(3) = 2e-032
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = +1 / -1
Query: 406 RQRQADGACQREHRAPPPRLPVRQRDHQGDPRPPGIREV 522
R+RQAD A QREHRAPP PVRQR HQGD R P +REV
Sbjct: 118 RRRQADRARQREHRAPPHGFPVRQRGHQGDHRAPRVREV 2
Score = 46.0 bits (94), Expect(3) = 3e-039
Identities = 23/39 (58%), Positives = 24/39 (61%)
Frame = -3 / +1
Query: 523 PLLVCREAEDLLGDRVXXXXXXXXELDAHVGMRHRLVVG 407
PLLV E DLLG RV ELDAHVG+R RL VG
Sbjct: 1 PLLVRGELGDLLGGRVAERETHAEELDAHVGVRDRLAVG 117
Score = 25.4 bits (49), Expect(3) = 2e-032
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3 / -3
Query: 273 RATHQLTSGWTVSRC 317
RAT TSGWT C
Sbjct: 257 RATQLWTSGWTACHC 213
Score = 23.1 bits (44), Expect(4) = 1e-051
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2 / +3
Query: 413 RWRPWRPP 390
R RPWRPP
Sbjct: 114 RRRPWRPP 137
>gb|BG273460.1|BG273460 OV2_26_A05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 431
Score = 227 bits (490), Expect = 4e-058
Identities = 91/141 (64%), Positives = 111/141 (78%)
Frame = +2 / +1
Query: 632 LMRKYKIKVRGHNVFWDDQNSQMQWVKPLNLAQLKAAMQKRLKSVVSPYAGKVIHWDVVN 811
L K+ I VRGHNVFWDDQ+ QM WV L++ +L+AA+ K LKSVVS YAGKVIHWDVVN
Sbjct: 7 LAEKHNISVRGHNVFWDDQSHQMPWVSKLSVDKLRAAVAKHLKSVVSRYAGKVIHWDVVN 186
Query: 812 ENLHFNFFETKLGPMASAQIYQQVGQLDRNAILFMNEFNTLEQPGDPNPVPAKYVAKMNQ 991
ENLHF+FFE KLG AS +I+++V +LD ILFMNEFNT+EQP D P+P KY+AK+ Q
Sbjct: 187 ENLHFSFFEEKLGKDASGEIFKEVAKLDPKPILFMNEFNTIEQPCDKAPLPTKYLAKLRQ 366
Query: 992 IRGYAGNGGLKLGVGLESHFS 1054
I+ Y GN LK G+GLESHF+
Sbjct: 367 IQSYPGNEDLKYGIGLESHFA 429
Score = 159 bits (342), Expect = 1e-037
Identities = 74/118 (62%), Positives = 78/118 (66%)
Frame = +1 / +3
Query: 640 QVQDQGARAQRVLGRPELADAVGEAPQPCAAQGSHAEAAQVRRVTLRRQGHPLGRGEREP 819
+ Q GAR QRVLGRPE DAVGE Q AQG EA Q RR+ LRRQGHPLGRGEREP
Sbjct: 15 EAQHLGARPQRVLGRPEPPDAVGEQAQRGQAQGRRGEAPQERRLPLRRQGHPLGRGEREP 194
Query: 820 ALQLLRDEAGPHGVGTDLPAGGAAGPQCHPIHERIQHAGAARRSQPCARQVRGQDEPD 993
LQLLR EAG V DL GG AGP HP+HER+QH AA R A QV GQ E D
Sbjct: 195 PLQLLRGEAGQGRVRGDLQGGGQAGP*AHPVHERVQHDRAALRQGAAADQVPGQAEAD 368
Score = 143 bits (307), Expect = 8e-033
Identities = 72/112 (64%), Positives = 76/112 (67%)
Frame = -1 / -1
Query: 981 LATYLAGTGLGSPGCSSVLNSFMNRMALRSSCPTCW*ICADAMGPSFVSKKLKCRFSFTT 802
LA YL G+G S GCS VLNSFMNRM L SS T I DA PSF SKKLK RFSFTT
Sbjct: 356 LARYLVGSGALSQGCSIVLNSFMNRMGLGSSLATSLKISPDASLPSFSSKKLKWRFSFTT 177
Query: 801 SQWMTLPA*GDTTDLSRFCMAALSCARLRGFTHCICEFWSSQNTLCPRTLIL 646
SQWMTLPA* +TT L F AALS + L TH I WSSQNTL PRT +L
Sbjct: 176 SQWMTLPA*RETTLLRCFATAALSLSTLSLLTHGIWWLWSSQNTLWPRTEML 21
>gb|CW130721.1|CW130721 104_513_11115274_116_34781_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11115274, DNA
sequence
Length = 684
Score = 167 bits (360), Expect(2) = 7e-054
Identities = 67/125 (53%), Positives = 88/125 (70%)
Frame = +2 / +3
Query: 287 VDIWVDSVSLQPFTFDEWDGHTRRSADKVRRRTVKGGAMGANDKPMAHANVSIELLRLGF 466
VDIWVD+VSLQPF+ +EW H + R++TV+ A ++ KP+ A V IE +R GF
Sbjct: 309 VDIWVDNVSLQPFSREEWAAHHHAAIKSARKKTVRLRARDSSGKPVPGAQVRIEHVRSGF 488
Query: 467 PFGNAITKEILGLPAYEKWFTSRFSVATFENEMKWYSTEWTQNHEDYRVPDAMMNLMRKY 646
P G+A++ EIL PAY++WFTSRF+V TFENEMKWYSTE Q EDY VPDAM+ + +
Sbjct: 489 PLGSAMSAEILQSPAYQRWFTSRFTVTTFENEMKWYSTERVQGREDYSVPDAMLRFAKSH 668
Query: 647 KIKVR 661
+ VR
Sbjct: 669 GVAVR 683
Score = 84.9 bits (179), Expect(3) = 4e-031
Identities = 47/93 (50%), Positives = 54/93 (58%)
Frame = -1 / -3
Query: 660 RTLILYLRIRFIMASGTR*SSWFWVHSVLYHFISFSKVATLKRDVNHFSYAGRPRISLVI 481
RT +L +ASGT *SS SVLYHFISFS V T+ RDVNH YAG RIS ++
Sbjct: 682 RTATPWLLANRSIASGTE*SSRPCTRSVLYHFISFSNVVTVNRDVNHRWYAGLCRISALM 503
Query: 480 ALPNGKPRRRSSMLTLACAIGLSLAPMAPPFTV 382
A P+GKP R SM T A G +A TV
Sbjct: 502 ADPSGKPLRTCSMRTCAPGTGFPDESLARSRTV 404
Score = 66.1 bits (138), Expect(2) = 7e-054
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = +2 / +2
Query: 164 NGERVIAGAIVAQSGCWSMLKGGMTAYSSGPAEIYFESHAP 286
NGE + AG + A+SGCWS+LKGG+TA +SG AE+YFE + P
Sbjct: 68 NGEFIHAGGVEARSGCWSILKGGLTAPASGAAELYFEVNKP 190
Score = 62.5 bits (130), Expect(3) = 1e-021
Identities = 31/54 (57%), Positives = 34/54 (62%)
Frame = -3 / -2
Query: 652 DLVLAHQVHHGVRNAVVLMVLGPLGAVPLHLVLEGGHAEARREPLLVCREAEDL 491
D V + H V + VVL L PL AVPLHLVLE GH E RREP LV R +DL
Sbjct: 674 DAVALGEPQHRVGDRVVLPPLHPLRAVPLHLVLERGHREPRREPPLVRRALQDL 513
Score = 54.7 bits (113), Expect(3) = 1e-021
Identities = 27/54 (50%), Positives = 31/54 (57%)
Frame = -3 / -2
Query: 448 LDAHVGMRHRLVVGAHGAPLHGSPADLVGGAAGVTVPLVEGEGLQRDTVHPDVN 287
LDAH+ RH L GA H A + G V PL+ GEGLQRD VHPDV+
Sbjct: 470 LDAHLRARHGLPRRVPGAEPHRLLARRLDGRVVVRRPLLAGEGLQRDVVHPDVH 309
Score = 49.6 bits (102), Expect(3) = 4e-031
Identities = 24/43 (55%), Positives = 28/43 (65%)
Frame = -1 / -1
Query: 291 STGAWLSK*ISAGPEE*AVMPPLSMLQQPDWATMAPAMTRSPL 163
++G + SK* SA PE AV PPL M QQPD A+ PA SPL
Sbjct: 195 ASGLFTSK*SSAAPEAGAVRPPLRMDQQPDRASTPPAWMNSPL 67
Score = 40.9 bits (83), Expect(3) = 4e-031
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -1 / -3
Query: 342 SHSSKVKGCSETLSTQMST 286
+HSS+ KGCSETLSTQMST
Sbjct: 364 AHSSREKGCSETLSTQMST 308
Score = 32.2 bits (64), Expect(3) = 1e-021
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3 / -3
Query: 280 VALKVDLCGSRRVSGHASLEHAPAARLGNDGTSDDAFAVG 161
V L+V+ C + G A+ E+ PAA D D FAVG
Sbjct: 184 VYLEVEFCRAGGGGGEAAFENGPAAGPRFDAAGVDEFAVG 65
>gb|CW387722.1|CW387722 fsbb001f072d02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f072d02, DNA
sequence
Length = 702
Score = 209 bits (450), Expect = 1e-052
Identities = 85/217 (39%), Positives = 129/217 (59%)
Frame = +2 / +3
Query: 362 ADKVRRRTVKGGAMGANDKPMAHANVSIELLRLGFPFGNAITKEILGLPAYEKWFTSRFS 541
A ++R+R V N + ANV++ + FP G+AI+K I+G Y+ WF +RF+
Sbjct: 51 ATQIRKRFVNVHVSDGNGSRVVGANVAVHQITRDFPLGSAISKSIIGNKPYQDWFNARFN 230
Query: 542 VATFENEMKWYSTEWTQNHEDYRVPDAMMNLMRKYKIKVRGHNVFWDDQNSQMQWVKPLN 721
A FENE+KWY+TE + EDY D ++ L++ + RGHN+FW+D WVK L
Sbjct: 231 AAVFENELKWYATEPSPGKEDYAAADQLLQLVQSNDVMARGHNIFWEDPKYTPAWVKNLT 410
Query: 722 LAQLKAAMQKRLKSVVSPYAGKVIHWDVVNENLHFNFFETKLGPMASAQIYQQVGQLDRN 901
+QLKAA+ R++S++S Y G +HWDV NE LHF+F+E +LG A+A + + D
Sbjct: 411 GSQLKAAVAGRIESLLSRYKGDFVHWDVSNEMLHFDFYENRLGGNATADFFSTAKRADPL 590
Query: 902 AILFMNEFNTLEQPGDPNPVPAKYVAKMNQIRGYAGN 1012
A LF+N+FN +E D + YV+++ R G+
Sbjct: 591 ATLFLNDFNVVEACDDLSSSADSYVSRLPPARRRRGS 701
>gb|BZ338079.1|BZ338079 ia92h04.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ia92h04 5', DNA sequence
Length = 313
Score = 182 bits (391), Expect(2) = 4e-052
Identities = 75/83 (90%), Positives = 77/83 (92%)
Frame = +2 / -3
Query: 866 QIYQQVGQLDRNAILFMNEFNTLEQPGDPNPVPAKYVAKMNQIRGYAGNGGLKLGVGLES 1045
+I+QQVGQLDRN ILFMNEFNTLEQPGDP P PAKYVAKM QIR Y GNGGLKLGVGLES
Sbjct: 251 RIFQQVGQLDRNPILFMNEFNTLEQPGDPIPTPAKYVAKMTQIRSYPGNGGLKLGVGLES 72
Query: 1046 HFSTPNIPYMRSSLDTLAKLKLP 1114
HFSTPNIPYMRSSLDTLAKLKLP
Sbjct: 71 HFSTPNIPYMRSSLDTLAKLKLP 3
Score = 83.5 bits (176), Expect(3) = 4e-028
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = -1 / +1
Query: 993 IWFILATYLAGTGLGSPGCSSVLNSFMNRMALRSSCPTCW 874
I I ATYLAG G+GSPGCSSVLNSFM R+ LRSSCPTCW
Sbjct: 124 ICVIFATYLAGVGMGSPGCSSVLNSFMKRIGLRSSCPTCW 243
Score = 79.0 bits (166), Expect(3) = 8e-026
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +1 / -2
Query: 868 DLPAGGAAGPQCHPIHERIQHAGAARRSQPCARQVRGQDEPD 993
DLPAGGAAGPQ P+HER+QHAGAARR P A QVRG+D+ D
Sbjct: 249 DLPAGGAAGPQPDPLHERVQHAGAARRPHPNAGQVRGEDDTD 124
Score = 49.2 bits (101), Expect(3) = 4e-028
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -1 / +1
Query: 1116 MGSFSLASVSSELLMYGMLGVLKW 1045
+GS S ASVSSELLMYGM GVLKW
Sbjct: 1 IGSLSFASVSSELLMYGMFGVLKW 72
Score = 46.9 bits (96), Expect(3) = 8e-026
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +1 / -2
Query: 1048 LQHTQHPVHEELAGHARQAEAA 1113
LQH +HPVHEELAGHA +A+AA
Sbjct: 69 LQHAEHPVHEELAGHAGEAQAA 4
Score = 46.0 bits (94), Expect(2) = 4e-052
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / -1
Query: 806 VNENLHFNFFETKLGPMAS 862
VNENLHFNFFETKLGP AS
Sbjct: 313 VNENLHFNFFETKLGPGAS 257
Score = 32.7 bits (65), Expect(3) = 4e-028
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1 / +3
Query: 861 DAMGPSFVSKKLKCRFS 811
DA GPS VSKKLK RFS
Sbjct: 258 DAPGPSLVSKKLKWRFS 308
Score = 31.8 bits (63), Expect(3) = 8e-026
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1 / -3
Query: 808 EREPALQLLRDEAGPHGVG 864
+REP LQLLRD+A P VG
Sbjct: 311 QREPPLQLLRDQARPGRVG 255
>gb|BE360627.1|BE360627 DG1_64_F08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 510
Score = 190 bits (409), Expect = 7e-047
Identities = 72/127 (56%), Positives = 94/127 (74%)
Frame = +2 / +1
Query: 1079 SSLDTLAKLKLPMWLTEVDVVKSPNQVKYLEQVLREGFAHPNVDGIVMWAAWHARGCYVM 1258
++LDT++K P+WLTE+DV PNQ YLEQ+LRE +AHP V GI++W A H +GCYVM
Sbjct: 1 AALDTMSKANAPIWLTEIDVAPGPNQAHYLEQILREVYAHPAVHGIILWTARHPQGCYVM 180
Query: 1259 CLTDNSFKNLPVGDLVDKLIAEWKTHRASATTDHNGAVELHLPLGDFKFTVSHPSLKAAA 1438
CLTD++F+NLP GD+VDKLIAEWKTH + D +G E L GD+K TVSHP +
Sbjct: 181 CLTDSNFRNLPTGDVVDKLIAEWKTHSHAGVADADGYYEAELFHGDYKVTVSHPVANSTV 360
Query: 1439 VQTMTVD 1459
VQ+++VD
Sbjct: 361 VQSLSVD 381
Score = 115 bits (246), Expect = 2e-024
Identities = 62/126 (49%), Positives = 67/126 (53%)
Frame = -1 / -2
Query: 1461 LSTVMV*TAAAFKDGWLTVNLKSPRGRWSSTAPL*SVVADARCVFHSAMSLSTRSPTGRF 1282
LST+ + T GWLTV L SP +S P S CVFHSAMSLST SP GRF
Sbjct: 383 LSTLRLCTTVELATGWLTVTL*SPWNSSAS*YPSASATPACECVFHSAMSLSTTSPVGRF 204
Query: 1281 LKLLSVRHMT*QPLACHAAHMTMPSTLGWAKPSLSTCSRYXXXXXXXXXXXXXSHMGSFS 1102
LKLLSVRHMT* P A MP T G A SLS CSR S MG+ +
Sbjct: 203 LKLLSVRHMT*HPCGWRAVQRMMPCTAGCAYTSLSICSR*CAWLGPGATSISVSQMGALA 24
Query: 1101 LASVSS 1084
L VSS
Sbjct: 23 LDMVSS 6
Score = 111 bits (236), Expect = 5e-023
Identities = 60/126 (47%), Positives = 74/126 (58%)
Frame = -3 / -1
Query: 1459 VDGHGLNSSGFQRWVAYGELKVA*GQVELHRPIVIGGGGRAVRLPLGDELVDEVAHGEVL 1280
VD L+ G VA G+L V Q+ L + + G VRLPL DELVD+VA G V
Sbjct: 381 VDAQALHHGGVGHRVADGDLVVPVEQLGLVVSVGVRHAGVRVRLPLRDELVDDVARG*VP 202
Query: 1279 EAVVREAHDVAAPGMPRCPHDDAVDVGVGEAFPEHLLQVLDLVGALDDIHLGEPHGQLQL 1100
E V EAHDVA+ + R P DDAV V PE+LLQV+ LVG D+ LG+P G++ L
Sbjct: 201 EVAVGEAHDVASLRVARRPEDDAVHGRVRVHLPEYLLQVVRLVGPRRDVDLGQPDGRVGL 22
Query: 1099 GERVQR 1082
G VQR
Sbjct: 21 GHGVQR 4
>gb|CW427972.1|CW427972 fsbb001f140d21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f140d21, DNA
sequence
Length = 696
Score = 124 bits (265), Expect(4) = 2e-044
Identities = 50/63 (79%), Positives = 60/63 (95%)
Frame = +2 / -1
Query: 1289 PVGDLVDKLIAEWKTHRASATTDHNGAVELHLPLGDFKFTVSHPSLKAAAVQTMTVDNSA 1468
PVGD+VDKLIAEWKTHRASATTD +GAVEL LPLG++KFTV HPSLKAAAVQT+TVD+++
Sbjct: 633 PVGDVVDKLIAEWKTHRASATTDRDGAVELDLPLGEYKFTVRHPSLKAAAVQTVTVDDTS 454
Query: 1469 SAS 1477
S++
Sbjct: 453 SSA 445
Score = 116 bits (248), Expect(4) = 7e-040
Identities = 48/62 (77%), Positives = 54/62 (87%)
Frame = -3 / +1
Query: 1474 RRRRIVDGHGLNSSGFQRWVAYGELKVA*GQVELHRPIVIGGGGRAVRLPLGDELVDEVA 1295
RRR +VDGHGLN S FQR V+YGEL +A*GQ+ELHRPI +GGGGRAVRLPL DELVD+VA
Sbjct: 448 RRRSVVDGHGLNRSSFQRRVSYGELILA*GQIELHRPIAVGGGGRAVRLPLRDELVDDVA 627
Query: 1294 HG 1289
G
Sbjct: 628 DG 633
Score = 105 bits (223), Expect(3) = 9e-032
Identities = 50/61 (81%), Positives = 50/61 (81%)
Frame = -1 / +2
Query: 1470 DAELSTVMV*TAAAFKDGWLTVNLKSPRGRWSSTAPL*SVVADARCVFHSAMSLSTRSPT 1291
D STV V*TAAAF DG LTVNL SPRGR SSTAP SVVADARCVFHSAMSLST SPT
Sbjct: 452 DEVSSTVTV*TAAAFSDGCLTVNLYSPRGRSSSTAPSRSVVADARCVFHSAMSLSTTSPT 631
Query: 1290 G 1288
G
Sbjct: 632 G 634
Score = 86.8 bits (183), Expect(2) = 1e-022
Identities = 36/58 (62%), Positives = 42/58 (72%)
Frame = +1 / -3
Query: 1324 VEDAPRVRHHRSQWGGGAPPAPRRL*VHRKPPIFESRCCSNHDRRQFGVGVPAYHQRQ 1497
VEDAPRVRHHR +WGGGA APRR+*VHRK P+ ES C SN DRR+ V H ++
Sbjct: 598 VEDAPRVRHHRPRWGGGARSAPRRV*VHRKTPVAESCCGSNRDRRRHFVVGVGVHHQR 425
Score = 58.8 bits (122), Expect(4) = 2e-044
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2 / -2
Query: 1229 AWHARGCYVMCLTDNSFKNLP 1291
AWHA+GCYVMCLTDNSFKNLP
Sbjct: 695 AWHAKGCYVMCLTDNSFKNLP 633
Score = 51.9 bits (107), Expect(4) = 7e-040
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / +1
Query: 1290 GRFLKLLSVRHMT*QPLACHA 1228
GRFLKLLSVRHMT*QPLACHA
Sbjct: 634 GRFLKLLSVRHMT*QPLACHA 696
Score = 45.1 bits (92), Expect(3) = 9e-032
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3 / +3
Query: 1291 GEVLEAVVREAHDVAAPGMPR 1229
GEVLEAVVREAHDVAA G+PR
Sbjct: 633 GEVLEAVVREAHDVAALGVPR 695
Score = 42.3 bits (86), Expect(2) = 1e-022
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1 / -1
Query: 1231 VACQGLLRHVPHGQQLQE 1284
VA QGLLRHVPHGQQLQE
Sbjct: 693 VARQGLLRHVPHGQQLQE 640
Score = 32.2 bits (64), Expect(4) = 7e-040
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2 / +3
Query: 1535 RSATECLMSSPRT*R*WYAGTPTPNCRR 1452
R+A +P+T*R*W TPT CRR
Sbjct: 384 RTARIVACMAPKT*R*W*TPTPTTKCRR 467
Score = 32.2 bits (64), Expect(4) = 2e-044
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1 / -3
Query: 1453 RRQFGVGVPAYHQRQVLG 1506
RR F VGV +HQRQVLG
Sbjct: 466 RRHFVVGVGVHHQRQVLG 413
Score = 27.6 bits (54), Expect(3) = 9e-032
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -3 / +1
Query: 1507 LLGLDVDGMLGRRRRIV 1457
LL LDVDG L RRRR V
Sbjct: 412 LLRLDVDGELRRRRRSV 462
Score = 23.1 bits (44), Expect(4) = 2e-044
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / -1
Query: 1550 LYFSFW*INR 1579
L+ SFW*INR
Sbjct: 348 LFLSFW*INR 319
Score = 22.1 bits (42), Expect(4) = 7e-040
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / +1
Query: 1622 CHVSFPS 1602
CHVSFPS
Sbjct: 277 CHVSFPS 297
>gb|CF480251.1|CF480251 POL1_64_D06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_D06_A002 5', mRNA sequence
Length = 744
Score = 119 bits (254), Expect(3) = 1e-043
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = +2 / +1
Query: 128 TSAHVRAVIKSPNGERVIAGAIVAQSGCWSMLKGGMTAYSSGPAEIYFESHAPVDIW 298
+SAHVRA+IKSPNGERVIAGAI A+SGCWSMLKGGMT+ SSG AEIYFESHA VDIW
Sbjct: 541 SSAHVRAIIKSPNGERVIAGAIDAKSGCWSMLKGGMTSDSSGHAEIYFESHAAVDIW 711
Score = 108 bits (231), Expect(2) = 5e-035
Identities = 44/57 (77%), Positives = 45/57 (78%)
Frame = +1 / +3
Query: 130 VGTCEGGDQVPQRRTRHRWCHRCPVGLLEHAQGRHDRLLFGTRRDLL*EPRTS*HLG 300
VG CEG QVP RR RHRWCHRC V LLEHAQGRHD LFGTRRDLL EPR+ HLG
Sbjct: 543 VGPCEGDHQVP*RRARHRWCHRCQVRLLEHAQGRHDL*LFGTRRDLLREPRSCGHLG 713
Score = 106 bits (227), Expect(3) = 9e-037
Identities = 46/57 (80%), Positives = 48/57 (84%)
Frame = -3 / -1
Query: 298 PDVNWCVALKVDLCGSRRVSGHASLEHAPAARLGNDGTSDDAFAVGGLDHRPHMCRR 128
PDV+ CVAL+VDLC SRRV GHASLEHAPAA LG DGTSDDA AV GLD RPHM RR
Sbjct: 711 PDVHSCVALEVDLCVSRRVRGHASLEHAPAAGLGIDGTSDDALAVRGLDDRPHMGRR 541
Score = 104 bits (222), Expect(2) = 4e-032
Identities = 47/56 (83%), Positives = 49/56 (87%)
Frame = -1 / -2
Query: 297 QMSTGAWLSK*ISAGPEE*AVMPPLSMLQQPDWATMAPAMTRSPLGDLITALTCAD 130
QMST AWLSK*ISA PEE VMPPLSMLQQPD A+MAPAMTRSPLGDL+ ALT AD
Sbjct: 710 QMSTAAWLSK*ISACPEESEVMPPLSMLQQPDLASMAPAMTRSPLGDLMIALTWAD 543
Score = 96.4 bits (204), Expect(2) = 3e-030
Identities = 47/62 (75%), Positives = 49/62 (79%)
Frame = +3 / +2
Query: 114 RCRTARRHM*GR*SSPPTANASSLVPSLPSRAAGACSREA*PLTLRDPQRSTLRATHQLT 293
R RR M*GR SSP TA+ASSLVPS+PS AAGACSREA*PLTLRD QRST RAT T
Sbjct: 527 RMARRRRPM*GRSSSPLTASASSLVPSMPSPAAGACSREA*PLTLRDTQRSTSRATQLWT 706
Query: 294 SG 299
SG
Sbjct: 707 SG 712
Score = 73.5 bits (154), Expect(3) = 1e-043
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = +1 / +1
Query: 7 GRSYVSSSGKLLPSHSVYQRIQMQSDRHYSLSAW 108
G S V+SSGKLLPSHSVYQR+QMQ DRHYSLSAW
Sbjct: 409 GSSAVASSGKLLPSHSVYQRVQMQGDRHYSLSAW 510
Score = 62.0 bits (129), Expect(2) = 5e-035
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2 / +2
Query: 35 SSYRPTACTRESRCRATGTTRYQHG 109
SSYRPTA TRESRCRATGTTRYQHG
Sbjct: 437 SSYRPTASTRESRCRATGTTRYQHG 511
Score = 60.6 bits (126), Expect(3) = 9e-037
Identities = 25/34 (73%), Positives = 25/34 (73%)
Frame = -3 / -3
Query: 106 MLIASSACRSASGFSGTRCGTVGACRCCSRSFAP 5
MLIASSACR ASG SG RCGTVGAC C R P
Sbjct: 508 MLIASSACRPASGLSGRRCGTVGACHCWPRRSFP 407
Score = 58.3 bits (121), Expect(2) = 3e-030
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +3 / +3
Query: 6 GAKLREQQRQAPTVPQRVPENPDAERQALLAISM 107
G R QQ QAPTVPQR+PE+PDA RQALLAISM
Sbjct: 408 GKLRRGQQWQAPTVPQRLPESPDAGRQALLAISM 509
Score = 56.5 bits (117), Expect(2) = 4e-032
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -2 / -2
Query: 107 HADSE*CLSLCIWILWYTLWDGRS 36
HADSE*CLS CIW LW TLWDGRS
Sbjct: 509 HADSE*CLSPCIWTLW*TLWDGRS 438
Score = 27.2 bits (53), Expect(3) = 9e-037
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / -1
Query: 330 KVKGCSETLST 298
KVKGCS+TLST
Sbjct: 744 KVKGCSDTLST 712
Score = 25.4 bits (49), Expect(3) = 1e-043
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2 / +2
Query: 299 VDSVSLQPFT 328
VDSVSLQPFT
Sbjct: 713 VDSVSLQPFT 742
>gb|CW088279.1|CW088279 104_433_10948091_114_32572_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948091, DNA
sequence
Length = 689
Score = 116 bits (249), Expect(3) = 4e-043
Identities = 45/88 (51%), Positives = 60/88 (68%)
Frame = +2 / -2
Query: 1154 QVKYLEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKT 1333
Q YLEQVLRE ++HP V G+++W A H GCY MCLTD + NLP GD+VD+L+ EW+T
Sbjct: 439 QAAYLEQVLREAYSHPAVSGVMLWTALHPSGCYQMCLTDWNLANLPTGDVVDRLLNEWRT 260
Query: 1334 HRASATTDHNGAVELHLPLGDFKFTVSH 1417
+A TD +GA LG++ TVS+
Sbjct: 259 LQAGGQTDAHGAYSFSGYLGEYVLTVSY 176
Score = 67.0 bits (140), Expect(3) = 4e-043
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +2 / -2
Query: 989 QIRGYAGNGGLKLGVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDV 1138
+++ G + G+GLE HFS PNIP MR+ LD LA L LP+W TE+D+
Sbjct: 613 KLKELRSGGAILEGIGLEGHFSKPNIPLMRAILDKLATLGLPIWFTEIDI 464
Score = 32.2 bits (64), Expect(3) = 4e-043
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2 / -2
Query: 908 LFMNEFNTLEQPGDPNPVPAKYVAKMNQIR 997
LFMNE+N +E D YVAK+ ++R
Sbjct: 685 LFMNEYNVIETCDDSFSTVDTYVAKLKELR 596
>gb|CN138573.1|CN138573 OX1_64_D01.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_64_D01_A002 5', mRNA sequence
Length = 805
Score = 109 bits (232), Expect(3) = 7e-043
Identities = 44/86 (51%), Positives = 61/86 (70%)
Frame = +2 / +1
Query: 287 VDIWVDSVSLQPFTFDEWDGHTRRSADKVRRRTVKGGAMGANDKPMAHANVSIELLRLGF 466
VDIWVD+VSLQPF+ +EW H + R++TV+ A ++ KP+ A V IE +R GF
Sbjct: 544 VDIWVDNVSLQPFSREEWAAHHHAAIKSARKKTVRLRARDSSGKPVPGAQVRIEHVRSGF 723
Query: 467 PFGNAITKEILGLPAYEKWFTSRFSV 544
P G+A++ EIL PAY++WFTSRF+V
Sbjct: 724 PLGSAMSAEILQSPAYQRWFTSRFTV 801
Score = 66.1 bits (138), Expect(3) = 7e-043
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +2 / +1
Query: 164 NGERVIAGAIVAQSGCWSMLKGGMTAYSSGPAEIYFESH 280
NGE + AG + A+SGCWS+LKGG+TA +SG AE+YFES+
Sbjct: 418 NGEFIHAGGVEARSGCWSILKGGLTAPASGAAELYFESN 534
Score = 48.7 bits (100), Expect(4) = 4e-024
Identities = 26/54 (48%), Positives = 31/54 (57%)
Frame = -1 / -3
Query: 543 TLKRDVNHFSYAGRPRISLVIALPNGKPRRRSSMLTLACAIGLSLAPMAPPFTV 382
T+ RDVNH YAG RIS ++A P+GKP R SM T A G +A TV
Sbjct: 800 TVNRDVNHRWYAGLWRISALMADPSGKPLRTCSMRTCAPGTGFPDESLARSRTV 639
Score = 48.3 bits (99), Expect(4) = 4e-024
Identities = 24/38 (63%), Positives = 25/38 (65%)
Frame = -1 / -3
Query: 276 LSK*ISAGPEE*AVMPPLSMLQQPDWATMAPAMTRSPL 163
LSK* SA PE AV PPL M QQPD A+ PA SPL
Sbjct: 530 LSK*SSAAPEAGAVRPPLRMDQQPDRASTPPAWMNSPL 417
Score = 40.9 bits (83), Expect(4) = 4e-024
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -1 / -3
Query: 342 SHSSKVKGCSETLSTQMST 286
+HSS+ KGCSETLSTQMST
Sbjct: 599 AHSSREKGCSETLSTQMST 543
Score = 40.0 bits (81), Expect(3) = 7e-043
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1 / +1
Query: 7 GRSYVSSSGKLLPSHSVYQRIQMQSDRHYSLSAW 108
G SY + + P SV Q++ +Q+D HY+LSAW
Sbjct: 268 GNSYGVARNRTRPYQSVSQKVFLQNDTHYTLSAW 369
Score = 30.9 bits (61), Expect(4) = 4e-024
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2 / -3
Query: 104 ADSE*CLSLCIWILWYTLWDGR 39
AD *C+S C W TLW GR
Sbjct: 365 ADRV*CVSFCRNTFWLTLWYGR 300
>gb|CN138490.1|CN138490 OX1_64_D01.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_64_D01_A002 3', mRNA sequence
Length = 768
Score = 113 bits (241), Expect(3) = 2e-042
Identities = 39/68 (57%), Positives = 54/68 (79%)
Frame = +2 / +1
Query: 1022 KLGVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDVVKSPNQVKYLEQVLREGFAHP 1201
++ +GLE HFS P+IPY+R++LDT++K P+WLTE+DV PNQ YLEQ+LRE +AHP
Sbjct: 187 RMAIGLEGHFSVPSIPYIRAALDTMSKANAPIWLTEIDVAPGPNQAHYLEQILREVYAHP 366
Query: 1202 NVDGIVMW 1225
V GI++W
Sbjct: 367 AVHGIILW 390
Score = 71.6 bits (150), Expect(3) = 2e-042
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = +2 / +1
Query: 842 KLGPMASAQIYQQVGQLDRNAILFMNEFNTLEQPGDPNPVPAKYVAKMNQIRGYAGN 1012
K G ASA+ Y++ QLD A++ MNE+NTLE PGDP P+KY+ K+ QI+ + GN
Sbjct: 4 KFGWDASAEFYRKAHQLDAQALMSMNEYNTLEWPGDPMAGPSKYLGKLFQIKKFPGN 174
Score = 35.0 bits (70), Expect(3) = 2e-042
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2 / +3
Query: 1361 NGAVELHLPLGDFKFTVSHPSLKAAAVQTMTVD 1459
+G E L GD+K TVSHP + +Q+++VD
Sbjct: 390 DGYYEAELFHGDYKVTVSHPVANSTVMQSLSVD 488
>gb|BZ335098.1|BZ335098 hx95e04.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx95e04 5', DNA sequence
Length = 619
Score = 167 bits (360), Expect = 4e-040
Identities = 65/112 (58%), Positives = 81/112 (72%)
Frame = +2 / -3
Query: 1142 KSPNQVKYLEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIA 1321
K P QV++LE+V+REGF HP V GIVMWAAWHA+GCYVMCLTDN+FKNLP GDLVD+L+
Sbjct: 614 KGPKQVEFLEEVMREGFGHPGVKGIVMWAAWHAKGCYVMCLTDNNFKNLPQGDLVDRLLD 435
Query: 1322 EWKTHRASATTDHNGAVELHLPLGDFKFTVSHPSLKAAAVQTMTVDNSASAS 1477
EW+ TD NG E L G+++ TV H SLK VQT+ +D + A+
Sbjct: 434 EWRKVPEKPMTDSNGVFEAELFHGEYQVTVKHASLKEPIVQTVDLDTKSEAA 279
Score = 119 bits (255), Expect = 1e-025
Identities = 58/99 (58%), Positives = 64/99 (64%)
Frame = -1 / +1
Query: 1461 LSTVMV*TAAAFKDGWLTVNLKSPRGRWSSTAPL*SVVADARCVFHSAMSLSTRSPTGRF 1282
+S V T + D LTV SP +S PL SV+ + HS+ SLSTRSP GRF
Sbjct: 295 VSRSTVCTMGSLSDACLTVTWYSPWKSSASNTPLLSVMGFSGTFLHSSRSLSTRSPCGRF 474
Query: 1281 LKLLSVRHMT*QPLACHAAHMTMPSTLGWAKPSLSTCSR 1165
LKLLSVRHMT*QPLAC AAHMTMP T GW PSL T SR
Sbjct: 475 LKLLSVRHMT*QPLACQAAHMTMPLTPGWPNPSLITSSR 591
>gb|CW387721.1|CW387721 fsbb001f072d02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f072d02, DNA
sequence
Length = 645
Score = 69.3 bits (145), Expect(4) = 2e-039
Identities = 26/64 (40%), Positives = 40/64 (62%)
Frame = +2 / -2
Query: 1247 CYVMCLTDNSFKNLPVGDLVDKLIAEWKTHRASATTDHNGAVELHLPLGDFKFTVSHPSL 1426
CY MCLTD +F NLP GD+VD+L+ EW+T T+ G+ LG+++ +V++ +
Sbjct: 260 CYQMCLTDANFTNLPAGDVVDRLLGEWQTKEVLGATNDRGSFNFSAFLGEYRLSVTYLNR 81
Query: 1427 KAAA 1438
A A
Sbjct: 80 TADA 69
Score = 68.9 bits (144), Expect(4) = 2e-039
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +2 / -2
Query: 983 MNQIRGYAGNGGLKLGVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDV 1138
++++R A G G+GLE HF PNIPY+R+ LD L L+LP+WLTE+D+
Sbjct: 536 VSRLRQLADAGVTFEGIGLEGHFGKPNIPYVRAVLDKLGTLRLPVWLTEIDI 381
Score = 53.8 bits (111), Expect(4) = 2e-039
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +2 / -2
Query: 1154 QVKYLEQVLREGFAHPNVDGIVMWAAWHA 1240
Q YLE+VLREGFAHP+VDGI++W A A
Sbjct: 356 QAAYLEEVLREGFAHPSVDGIMLWTAMGA 270
Score = 29.5 bits (58), Expect(4) = 2e-039
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2 / -2
Query: 893 DRNAILFMNEFNTLEQPGDPNPVPAKYVAKMNQI 994
D A LF+N+FN +E D + YV+++ Q+
Sbjct: 617 DPLATLFLNDFNVVEACDDLSSSADSYVSRLRQL 516
>gb|CX606463.1|CX606463 ANR1_3_E04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_3_E04_A002 3', mRNA sequence
Length = 649
Score = 164 bits (353), Expect = 3e-039
Identities = 63/110 (57%), Positives = 80/110 (72%)
Frame = +2 / +3
Query: 1130 VDVVKSPNQVKYLEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVD 1309
+DV PNQ YLEQ+LRE +AHP V GI++W A H +GCYVMCLTD++F+NLP GD+VD
Sbjct: 3 IDVAPGPNQAHYLEQILREVYAHPAVHGIILWTARHPQGCYVMCLTDSNFRNLPTGDVVD 182
Query: 1310 KLIAEWKTHRASATTDHNGAVELHLPLGDFKFTVSHPSLKAAAVQTMTVD 1459
KLIAEWKTH + D +G E L GD+K TVSHP + VQ+++VD
Sbjct: 183 KLIAEWKTHSHAGVADADGYYEAELFHGDYKVTVSHPVANSTVVQSLSVD 332
Score = 110 bits (235), Expect = 7e-023
Identities = 55/99 (55%), Positives = 58/99 (58%)
Frame = -1 / -1
Query: 1461 LSTVMV*TAAAFKDGWLTVNLKSPRGRWSSTAPL*SVVADARCVFHSAMSLSTRSPTGRF 1282
LST+ + T GWLTV L SP +S P S CVFHSAMSLST SP GRF
Sbjct: 334 LSTLRLCTTVELATGWLTVTL*SPWNSSAS*YPSASATPACECVFHSAMSLSTTSPVGRF 155
Query: 1281 LKLLSVRHMT*QPLACHAAHMTMPSTLGWAKPSLSTCSR 1165
LKLLSVRHMT* P A MP T G A SLS CSR
Sbjct: 154 LKLLSVRHMT*HPCGWRAVQRMMPCTAGCAYTSLSICSR 38
>gb|BG412888.1|BG412888 OV2_36_B07.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 535
Score = 116 bits (249), Expect(2) = 5e-039
Identities = 45/88 (51%), Positives = 60/88 (68%)
Frame = +2 / +1
Query: 1154 QVKYLEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKT 1333
Q YLEQVLRE ++HP V G+++W A H GCY MCLTD + NLP GD+VD+L+ EW+T
Sbjct: 235 QAAYLEQVLREAYSHPAVSGVMLWTALHPSGCYQMCLTDWNLANLPTGDVVDRLLNEWRT 414
Query: 1334 HRASATTDHNGAVELHLPLGDFKFTVSH 1417
+A TD +GA LG++ TVS+
Sbjct: 415 LQAGGQTDAHGAYSFSGYLGEYVLTVSY 498
Score = 67.0 bits (140), Expect(2) = 5e-039
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +2 / +1
Query: 989 QIRGYAGNGGLKLGVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDV 1138
+++ G + G+GLE HFS PNIP MR+ LD LA L LP+W TE+D+
Sbjct: 61 KLKELRSGGAILEGIGLEGHFSKPNIPLMRAILDKLATLGLPIWFTEIDI 210
>gb|CW088281.1|CW088281 104_433_10948091_250_32620_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948091, DNA
sequence
Length = 624
Score = 116 bits (247), Expect(2) = 1e-038
Identities = 45/88 (51%), Positives = 60/88 (68%)
Frame = +2 / -3
Query: 1154 QVKYLEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKT 1333
Q YLEQVLRE ++HP V G+++W A H GCY MCLTD + NLP GD+VD+L+ EW+T
Sbjct: 415 QAAYLEQVLREAYSHPAVRGVMLWTALHPSGCYQMCLTDWNLANLPTGDVVDRLLNEWRT 236
Query: 1334 HRASATTDHNGAVELHLPLGDFKFTVSH 1417
+A TD +GA LG++ TVS+
Sbjct: 235 LQAGGQTDAHGAYSFSGYLGEYVLTVSY 152
Score = 67.0 bits (140), Expect(2) = 1e-038
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +2 / -3
Query: 989 QIRGYAGNGGLKLGVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDV 1138
+++ G + G+GLE HFS PNIP MR+ LD LA L LP+W TE+D+
Sbjct: 589 KLKELRSGGAILEGIGLEGHFSKPNIPXMRAILDKLATLGLPIWFTEIDI 440
>gb|CW088283.1|CW088283 104_433_10948092_114_32573_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948092, DNA
sequence
Length = 666
Score = 115 bits (245), Expect(2) = 2e-038
Identities = 44/88 (50%), Positives = 60/88 (68%)
Frame = +2 / -3
Query: 1154 QVKYLEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKT 1333
Q YLEQVLRE ++HP V G+++W A H GCY MCL+D + NLP GD+VD+L+ EW+T
Sbjct: 439 QAAYLEQVLREAYSHPAVSGVMLWTALHPSGCYQMCLSDWNLANLPTGDVVDRLLNEWRT 260
Query: 1334 HRASATTDHNGAVELHLPLGDFKFTVSH 1417
+A TD +GA LG++ TVS+
Sbjct: 259 LQAGGQTDAHGAYSFSGYLGEYVLTVSY 176
Score = 67.0 bits (140), Expect(2) = 2e-038
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +2 / -3
Query: 989 QIRGYAGNGGLKLGVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDV 1138
+++ G + G+GLE HFS PNIP MR+ LD LA L LP+W TE+D+
Sbjct: 613 KLKELRSGGAILEGIGLEGHFSKPNIPLMRAILDKLATLGLPIWFTEIDI 464
>gb|CX610379.1|CX610379 ANR1_18_G11.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_G11_A002 3', mRNA sequence
Length = 681
Score = 160 bits (344), Expect = 6e-038
Identities = 62/108 (57%), Positives = 78/108 (72%)
Frame = +2 / +3
Query: 1136 VVKSPNQVKYLEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKL 1315
V PNQ YLEQ+LRE +AHP V GI++W A H +GCYVMCLTD++F+NLP GD+VDKL
Sbjct: 3 VAPGPNQAHYLEQILREVYAHPAVHGIILWTARHPQGCYVMCLTDSNFRNLPTGDVVDKL 182
Query: 1316 IAEWKTHRASATTDHNGAVELHLPLGDFKFTVSHPSLKAAAVQTMTVD 1459
IAEWKTH + D +G E L GD+K TVSHP + VQ+++VD
Sbjct: 183 IAEWKTHSHAGVADADGYYEAELFHGDYKVTVSHPVANSTVVQSLSVD 326
Score = 110 bits (235), Expect = 7e-023
Identities = 55/99 (55%), Positives = 58/99 (58%)
Frame = -1 / -3
Query: 1461 LSTVMV*TAAAFKDGWLTVNLKSPRGRWSSTAPL*SVVADARCVFHSAMSLSTRSPTGRF 1282
LST+ + T GWLTV L SP +S P S CVFHSAMSLST SP GRF
Sbjct: 328 LSTLRLCTTVELATGWLTVTL*SPWNSSAS*YPSASATPACECVFHSAMSLSTTSPVGRF 149
Query: 1281 LKLLSVRHMT*QPLACHAAHMTMPSTLGWAKPSLSTCSR 1165
LKLLSVRHMT* P A MP T G A SLS CSR
Sbjct: 148 LKLLSVRHMT*HPCGWRAVQRMMPCTAGCAYTSLSICSR 32
>gb|CX621984.1|CX621984 GABR1_61_G10.b2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_61_G10_A002 3', mRNA sequence
Length = 639
Score = 159 bits (341), Expect = 2e-037
Identities = 61/104 (58%), Positives = 77/104 (74%)
Frame = +2 / +3
Query: 1148 PNQVKYLEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEW 1327
PNQ YLEQ+LRE +AHP V GI++W A H +GCYVMCLTD++F+NLP GD+VDKLIAEW
Sbjct: 12 PNQAHYLEQILREVYAHPAVHGIILWTARHPQGCYVMCLTDSNFRNLPTGDVVDKLIAEW 191
Query: 1328 KTHRASATTDHNGAVELHLPLGDFKFTVSHPSLKAAAVQTMTVD 1459
KTH + D +G E L GD+K TVSHP + VQ+++VD
Sbjct: 192 KTHSHAGVADADGYYEAELFHGDYKVTVSHPVANSTVVQSLSVD 323
Score = 110 bits (235), Expect = 7e-023
Identities = 55/99 (55%), Positives = 58/99 (58%)
Frame = -1 / -3
Query: 1461 LSTVMV*TAAAFKDGWLTVNLKSPRGRWSSTAPL*SVVADARCVFHSAMSLSTRSPTGRF 1282
LST+ + T GWLTV L SP +S P S CVFHSAMSLST SP GRF
Sbjct: 325 LSTLRLCTTVELATGWLTVTL*SPWNSSAS*YPSASATPACECVFHSAMSLSTTSPVGRF 146
Query: 1281 LKLLSVRHMT*QPLACHAAHMTMPSTLGWAKPSLSTCSR 1165
LKLLSVRHMT* P A MP T G A SLS CSR
Sbjct: 145 LKLLSVRHMT*HPCGWRAVQRMMPCTAGCAYTSLSICSR 29
>gb|CW088282.1|CW088282 104_433_10948091_251_32621_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948091, DNA
sequence
Length = 707
Score = 156 bits (336), Expect = 8e-037
Identities = 61/148 (41%), Positives = 95/148 (64%)
Frame = +2 / +2
Query: 431 ANVSIELLRLGFPFGNAITKEILGLPAYEKWFTSRFSVATFENEMKWYSTEWTQNHEDYR 610
A++S+ FP G+AI ILG AY++WF +RF+ A FE+ +KWYST+ +
Sbjct: 263 ASLSVHKTAKDFPIGSAIASTILGNQAYQQWFVNRFNAAVFEDNLKWYSTDPMWGLLRFD 442
Query: 611 VPDAMMNLMRKYKIKVRGHNVFWDDQNSQMQWVKPLNLAQLKAAMQKRLKSVVSPYAGKV 790
VP+ M+ +R +++ VRGHN FW +Q++ + VK L L++A+ +KS+++ Y GK
Sbjct: 443 VPNKMLAFVRPHRVMVRGHNFFWKNQDATPRGVKNLTADNLRSAVNTLIKSLMTRYRGKF 622
Query: 791 IHWDVVNENLHFNFFETKLGPMASAQIY 874
HWDV N+ LH+NF+E +LGP AS +
Sbjct: 623 AHWDVNNKMLHYNFYEQRLGPNASMDFF 706
>gb|CW415805.1|CW415805 fsbb001f116b02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f116b02, DNA
sequence
Length = 388
Score = 155 bits (334), Expect = 1e-036
Identities = 57/123 (46%), Positives = 85/123 (69%)
Frame = +2 / -1
Query: 464 FPFGNAITKEILGLPAYEKWFTSRFSVATFENEMKWYSTEWTQNHEDYRVPDAMMNLMRK 643
FP G+AI ILG AY++WF RF+ A FE+E+KWYSTE + VPD M+ +R
Sbjct: 370 FPIGSAIASTILGNQAYQQWFVDRFNAAVFEDELKWYSTEPMSGLLRFDVPDQMLAFVRS 191
Query: 644 YKIKVRGHNVFWDDQNSQMQWVKPLNLAQLKAAMQKRLKSVVSPYAGKVIHWDVVNENLH 823
+++ VRGHN+FW++Q++ +WVK L L++A+ R++S+++ Y G+ HWDV NE LH
Sbjct: 190 HRVMVRGHNIFWENQDATPRWVKNLTADDLRSAVNTRIQSLMTRYRGEFAHWDVNNEMLH 11
Query: 824 FNF 832
+NF
Sbjct: 10 YNF 2
>gb|CW088280.1|CW088280 104_433_10948091_116_32575_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948091, DNA
sequence
Length = 677
Score = 144 bits (308), Expect(2) = 4e-036
Identities = 53/124 (42%), Positives = 83/124 (66%)
Frame = +2 / +3
Query: 431 ANVSIELLRLGFPFGNAITKEILGLPAYEKWFTSRFSVATFENEMKWYSTEWTQNHEDYR 610
A+VS++ FP G+AI ILG AY++WF RF+ A FE+E+KWYSTE +
Sbjct: 306 ASVSVQQTAKDFPIGSAIASTILGNQAYQQWFVDRFNAAVFEDELKWYSTEPMSGLLRFD 485
Query: 611 VPDAMMNLMRKYKIKVRGHNVFWDDQNSQMQWVKPLNLAQLKAAMQKRLKSVVSPYAGKV 790
VPD M+ +R +++ VRGHN+FW++Q++ +WVK L L++A+ R++S+++ Y G+
Sbjct: 486 VPDQMLAFVRSHRVMVRGHNIFWENQDATPRWVKNLTADDLRSAVNTRIQSLMTRYRGEF 665
Query: 791 IHWD 802
HWD
Sbjct: 666 AHWD 677
Score = 34.1 bits (68), Expect(2) = 4e-036
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2 / +3
Query: 284 PVDIWVDSVSLQPFTFDEWDGHTRRSADKV 373
P+ I V S SLQPFT D+W H + + KV
Sbjct: 57 PMKITVASGSLQPFTTDQWAMHQQDTIRKV 146
>gb|CL184899.1|CL184899 104_398_10899163_114_32368_072 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899163, DNA
sequence
Length = 690
Score = 105 bits (223), Expect(4) = 1e-035
Identities = 42/99 (42%), Positives = 63/99 (63%)
Frame = +2 / -1
Query: 554 ENEMKWYSTEWTQNHEDYRVPDAMMNLMRKYKIKVRGHNVFWDDQNSQMQWVKPLNLAQL 733
ENE+KWY TE Q Y D ++N ++ VRGH +FW ++S WV+ LN QL
Sbjct: 690 ENELKWYYTEAVQGQVSYADADELINFCDRHGKPVRGHCIFWAVESSVQPWVRALNRDQL 511
Query: 734 KAAMQKRLKSVVSPYAGKVIHWDVVNENLHFNFFETKLG 850
+AA++ RL+ +VS Y+G+ H++V NE LH +F+ +LG
Sbjct: 510 RAAVEARLRGLVSRYSGRFPHYEVNNEMLHGDFYAQRLG 394
Score = 40.5 bits (82), Expect(4) = 1e-035
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2 / -1
Query: 1028 GVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDVVKSPNQVK 1162
G+G++ H + P + +LD LA LP+W+TE+DV + V+
Sbjct: 225 GIGVQGHVTHPVGDIICDALDKLAVTGLPVWITELDVSAADESVR 91
Score = 36.8 bits (74), Expect(4) = 1e-035
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2 / -1
Query: 1166 LEQVLREGFAHPNVDGIVMW 1225
LE VLRE +AHP V+GI++W
Sbjct: 81 LEIVLREAYAHPAVEGIMLW 22
Score = 25.8 bits (50), Expect(4) = 1e-035
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2 / -1
Query: 932 LEQPGDPNPVPAKYVAKMNQIR 997
+E DPN P KYVA + ++
Sbjct: 312 VESGNDPNATPEKYVALVTDLQ 247
>gb|BG356639.1|BG356639 OV2_26_A05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 419
Score = 149 bits (320), Expect = 1e-034
Identities = 58/100 (58%), Positives = 71/100 (71%)
Frame = +2 / +3
Query: 1178 LREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKTHRASATTD 1357
+REGF HP V GIVMWAAWHA+GCYVMCLTDN+FKNLP GDLVD+L+ EW+ TD
Sbjct: 3 MREGFGHPGVKGIVMWAAWHAKGCYVMCLTDNNFKNLPQGDLVDRLLDEWRKVPEKPMTD 182
Query: 1358 HNGAVELHLPLGDFKFTVSHPSLKAAAVQTMTVDNSASAS 1477
NG E L G+++ TV H SLK VQT+ +D + A+
Sbjct: 183 SNGVFEAELFHGEYQVTVKHASLKEPIVQTVDLDTKSEAA 302
Score = 112 bits (240), Expect = 1e-023
Identities = 54/94 (57%), Positives = 61/94 (64%)
Frame = -1 / -2
Query: 1461 LSTVMV*TAAAFKDGWLTVNLKSPRGRWSSTAPL*SVVADARCVFHSAMSLSTRSPTGRF 1282
+S V T + D LTV SP +S PL SV+ + HS+ SLSTRSP GRF
Sbjct: 286 VSRSTVCTMGSLSDACLTVTWYSPWKSSASNTPLLSVMGFSGTFLHSSRSLSTRSPCGRF 107
Query: 1281 LKLLSVRHMT*QPLACHAAHMTMPSTLGWAKPSL 1180
LKLLSVRH+T*QPLAC AAHMTMP T GW PSL
Sbjct: 106 LKLLSVRHIT*QPLACQAAHMTMPLTPGWPNPSL 5
>gb|BG412577.1|BG412577 OV2_36_B07.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 590
Score = 116 bits (249), Expect(2) = 5e-034
Identities = 45/88 (51%), Positives = 60/88 (68%)
Frame = +2 / +2
Query: 1154 QVKYLEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKT 1333
Q YLEQVLRE ++HP V G+++W A H GCY MCLTD + NLP GD+VD+L+ EW+T
Sbjct: 116 QAAYLEQVLREAYSHPAVSGVMLWTALHPSGCYQMCLTDWNLANLPTGDVVDRLLNEWRT 295
Query: 1334 HRASATTDHNGAVELHLPLGDFKFTVSH 1417
+A TD +GA LG++ TVS+
Sbjct: 296 LQAGGQTDAHGAYSFSGYLGEYVLTVSY 379
Score = 50.6 bits (104), Expect(2) = 5e-034
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / +2
Query: 1049 FSTPNIPYMRSSLDTLAKLKLPMWLTEVDV 1138
FS PNIP MR+ LD LA L LP+W TE+D+
Sbjct: 2 FSKPNIPLMRAILDKLATLGLPIWFTEIDI 91
>gb|CW079139.1|CW079139 104_398_10899163_116_32372_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899163, DNA
sequence
Length = 645
Score = 131 bits (281), Expect(2) = 5e-031
Identities = 56/149 (37%), Positives = 86/149 (57%)
Frame = +2 / +3
Query: 404 GANDKPMAHANVSIELLRLGFPFGNAITKEILGLPAYEKWFTSRFSVATFENEMKWYSTE 583
G + +A A++ + ++ P G ITK + P Y +FT F A ENE+KWY TE
Sbjct: 30 GDTTESVAGAHIQVIQVQNSVPIGTCITKAGMQNPEYVDFFTKHFDWAVLENELKWYYTE 209
Query: 584 WTQNHEDYRVPDAMMNLMRKYKIKVRGHNVFWDDQNSQMQWVKPLNLAQLKAAMQKRLKS 763
Q Y D ++N ++ VRGH +FW ++S WV+ LN QL+AA++ RL+
Sbjct: 210 AVQGQVSYADADELINFCDRHGKPVRGHCIFWAVESSVQPWVRALNRDQLRAAVEARLRG 389
Query: 764 VVSPYAGKVIHWDVVNENLHFNFFETKLG 850
+VS Y+G+ H++V NE LH +F+ +LG
Sbjct: 390 LVSRYSGRFPHYEVNNEMLHGDFYAQRLG 476
Score = 25.8 bits (50), Expect(2) = 5e-031
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2 / +3
Query: 932 LEQPGDPNPVPAKYVAKMNQIR 997
+E DPN P KYVA + ++
Sbjct: 558 VESGNDPNATPEKYVALVTDLQ 623
>gb|CW351701.1|CW351701 fsbb001f013j03f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f013j03, DNA
sequence
Length = 479
Score = 97.3 bits (206), Expect(2) = 3e-030
Identities = 37/91 (40%), Positives = 60/91 (65%)
Frame = +2 / +1
Query: 656 VRGHNVFWDDQNSQMQWVKPLNLAQLKAAMQKRLKSVVSPYAGKVIHWDVVNENLHFNFF 835
VRGH +FW+ ++ QWVK L+ L AA+ R+ +++ Y GK H+DV NE LH +F+
Sbjct: 7 VRGHCIFWEVDSAVQQWVKTLSTDDLSAAVSSRINGLLTRYKGKFKHYDVNNEMLHGSFY 186
Query: 836 ETKLGPMASAQIYQQVGQLDRNAILFMNEFN 928
+ KLG A +++ +LD +A+LF+N++N
Sbjct: 187 QDKLGKDIRAAMFKTASELDPDALLFVNDYN 279
Score = 57.4 bits (119), Expect(2) = 3e-030
Identities = 28/54 (51%), Positives = 32/54 (59%)
Frame = +2 / +1
Query: 977 AKMNQIRGYAGNGGLKLGVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDV 1138
A + QI G G GVGL+ H S P P +RS LD LA L LP+W TEVDV
Sbjct: 316 AYIQQIVGLQEQGAPVGGVGLQGHVSNPVGPVIRSVLDRLAVLGLPIWFTEVDV 477
>gb|CX606553.1|CX606553 ANR1_3_E04.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_3_E04_A002 5', mRNA sequence
Length = 841
Score = 66.1 bits (138), Expect(3) = 1e-028
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +2 / +1
Query: 164 NGERVIAGAIVAQSGCWSMLKGGMTAYSSGPAEIYFESH 280
NGE + AG + A+SGCWS+LKGG+TA +SG AE+YFES+
Sbjct: 550 NGEFIHAGGVEARSGCWSILKGGLTAPASGAAELYFESN 666
Score = 61.1 bits (127), Expect(3) = 1e-028
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = +2 / +1
Query: 287 VDIWVDSVSLQPFTFDEWDGHTRRSADKVRRRTVKGGAMGANDKPMAHANVSIE 448
VDIWVD+VSLQPF+ +EW H + R++TV+ A ++ KP+ A V IE
Sbjct: 676 VDIWVDNVSLQPFSREEWAAHYHAAIKSARKKTVRLRARDSSGKPVPGAQVRIE 837
Score = 40.0 bits (81), Expect(3) = 1e-028
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1 / +1
Query: 7 GRSYVSSSGKLLPSHSVYQRIQMQSDRHYSLSAW 108
G SY + + P SV Q++ +Q+D HY+LSAW
Sbjct: 400 GNSYGVARNRTRPYQSVSQKVFLQNDTHYTLSAW 501
>gb|CW316898.1|CW316898 104_808_11473132_148_35858_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473132, DNA
sequence
Length = 580
Score = 81.7 bits (172), Expect(2) = 3e-028
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = +2 / +1
Query: 287 VDIWVDSVSLQPFTFDEWDGHTRRSADKVRRRTVKGGAMGANDKPMAHANVSIELLRLGF 466
VDIWVD+VSLQPF+ +EW H + R++TV+ A ++ KP+ A V IE +R GF
Sbjct: 367 VDIWVDNVSLQPFSREEWAAHHHAAIKSARKKTVRLRARDSSGKPVPGAQVRIEHVRSGF 546
Query: 467 PFGNAITKEIL 499
P G+A++ EIL
Sbjct: 547 PLGSAMSAEIL 579
Score = 66.1 bits (138), Expect(2) = 3e-028
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = +2 / +3
Query: 164 NGERVIAGAIVAQSGCWSMLKGGMTAYSSGPAEIYFESHAP 286
NGE + AG + A+SGCWS+LKGG+TA +SG AE+YFE + P
Sbjct: 126 NGEFIHAGGVEARSGCWSILKGGLTAPASGAAELYFEVNKP 248
>gb|CF483952.1|CF483952 POL1_2_E02.b1_A002 Pollen Sorghum bicolor cDNA clone POL1_2_E02_A002
3', mRNA sequence
Length = 444
Score = 108 bits (231), Expect(2) = 4e-026
Identities = 44/57 (77%), Positives = 53/57 (92%)
Frame = +2 / +3
Query: 1307 DKLIAEWKTHRASATTDHNGAVELHLPLGDFKFTVSHPSLKAAAVQTMTVDNSASAS 1477
DKLIAEWKTHRASATTD +GAVEL LPLG++KF V HPSLKAAAVQT+TVD+++S++
Sbjct: 3 DKLIAEWKTHRASATTDRDGAVELDLPLGEYKFPVRHPSLKAAAVQTVTVDDTSSSA 173
Score = 106 bits (227), Expect(3) = 2e-027
Identities = 44/56 (78%), Positives = 49/56 (87%)
Frame = -3 / -2
Query: 1474 RRRRIVDGHGLNSSGFQRWVAYGELKVA*GQVELHRPIVIGGGGRAVRLPLGDELV 1307
RRR +VDGHGLN S FQR V+YGEL +A*GQ+ELHRPI +GGGGRAVRLPL DELV
Sbjct: 170 RRRSVVDGHGLNRSSFQRRVSYGELILA*GQIELHRPIAVGGGGRAVRLPLRDELV 3
Score = 33.6 bits (67), Expect(3) = 2e-027
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -2 / -1
Query: 1535 RSATECLMSSPRT*R*WYAGTPTPNCRR 1452
R+A +PRT*R*W TPT CRR
Sbjct: 234 RTARIVACMAPRT*R*W*TPTPTTKCRR 151
Score = 32.2 bits (64), Expect(2) = 4e-026
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1 / +2
Query: 1453 RRQFGVGVPAYHQRQVLG 1506
RR F VGV +HQRQVLG
Sbjct: 152 RRHFVVGVGVHHQRQVLG 205
Score = 22.1 bits (42), Expect(3) = 2e-027
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -2
Query: 1622 CHVSFPS 1602
CHVSFPS
Sbjct: 341 CHVSFPS 321
>gb|CX610093.1|CX610093 ANR1_16_C09.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_16_C09_A002 5', mRNA sequence
Length = 805
Score = 66.1 bits (138), Expect(3) = 1e-025
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +2 / +1
Query: 164 NGERVIAGAIVAQSGCWSMLKGGMTAYSSGPAEIYFESH 280
NGE + AG + A+SGCWS+LKGG+TA +SG AE+YFES+
Sbjct: 550 NGEFIHAGGVEARSGCWSILKGGLTAPASGAAELYFESN 666
Score = 50.6 bits (104), Expect(3) = 1e-025
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +2 / +1
Query: 287 VDIWVDSVSLQPFTFDEWDGHTRRSADKVRRRTVK 391
VDIWVD+VSLQPF+ +EW H + R++TV+
Sbjct: 676 VDIWVDNVSLQPFSREEWAAHHHAAIKSARKKTVR 780
Score = 40.0 bits (81), Expect(3) = 1e-025
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1 / +1
Query: 7 GRSYVSSSGKLLPSHSVYQRIQMQSDRHYSLSAW 108
G SY + + P SV Q++ +Q+D HY+LSAW
Sbjct: 400 GNSYGVARNRTRPYQSVSQKVFLQNDTHYTLSAW 501
>gb|BE918281.1|BE918281 OV1_1_D11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 445
Score = 116 bits (249), Expect = 8e-025
Identities = 45/88 (51%), Positives = 60/88 (68%)
Frame = +2 / +2
Query: 1154 QVKYLEQVLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKT 1333
Q YLEQVLRE ++HP V G+++W A H GCY MCLTD + NLP GD+VD+L+ EW+T
Sbjct: 35 QAAYLEQVLREAYSHPAVSGVMLWTALHPSGCYQMCLTDWNLANLPTGDVVDRLLNEWRT 214
Query: 1334 HRASATTDHNGAVELHLPLGDFKFTVSH 1417
+A TD +GA LG++ TVS+
Sbjct: 215 LQAGGQTDAHGAYSFSGYLGEYVLTVSY 298
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,272,277,853
Number of Sequences: 832831
Number of extensions: 37412919
Number of successful extensions: 370427
Number of sequences better than 1.0e-020: 65
length of database: 163,786,556
effective HSP length: 57
effective length of database: 116,315,189
effective search space used: 64089669139
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)