TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3230260.2.1
(863 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN124163.1|CN124163 RHOH1_3_B09.b1_A002 Acid- and alkali... 323 2e-087
gb|BM330954.1|BM330954 PIC1_67_F03.g1_A002 Pathogen-infecte... 225 3e-066
gb|CN125588.1|CN125588 RHOH1_12_B03.b1_A002 Acid- and alkal... 136 1e-060
gb|CN127950.1|CN127950 RHOH1_26_C10.b1_A002 Acid- and alkal... 231 1e-059
gb|CX614598.1|CX614598 GABR1_15_C04.b1_A002 GA- or brassino... 130 6e-059
gb|CN146030.1|CN146030 WOUND1_37_A04.b1_A002 Wounded leaves... 129 9e-059
gb|CN132257.1|CN132257 OX1_5_C03.b1_A002 Oxidatively-stress... 187 5e-053
gb|CD213624.1|CD213624 HS1_52_G04.b1_A012 Heat-shocked seed... 118 8e-045
gb|BZ780254.1|BZ780254 ii38c12.g1 WGS-SbicolorF (DH5a methy... 126 8e-045
gb|BM328946.1|BM328946 PIC1_31_E07.g1_A002 Pathogen-infecte... 149 1e-043
gb|BE357345.1|BE357345 DG1_148_D02.g1_A002 Dark Grown 1 (DG... 146 3e-037
gb|CW032378.1|CW032378 104_261_10501343_115_30364 Sorghum m... 126 4e-037
gb|CL178820.1|CL178820 104_387_10894861_116_31906_157 Sorgh... 92 1e-036
gb|CW192819.1|CW192819 104_615_11179234_148_36775_041 Sorgh... 92 1e-036
gb|CW181597.1|CW181597 104_596_11163596_148_36653_070 Sorgh... 92 5e-035
gb|BM328785.1|BM328785 PIC1_26_E07.g1_A002 Pathogen-infecte... 122 3e-032
gb|BZ349552.1|BZ349552 hr42b05.g1 WGS-SbicolorF (JM107 adap... 120 5e-032
gb|BE363139.1|BE363139 DG1_9_D02.g1_A002 Dark Grown 1 (DG1)... 104 3e-029
gb|CF428323.1|CF428323 PH1_14_C04.b1_A002 Phosphorous-defic... 109 2e-028
gb|BZ780253.1|BZ780253 ii38c12.b1 WGS-SbicolorF (DH5a methy... 98 4e-028
gb|CW135383.1|CW135383 104_520_11117821_148_34832_063 Sorgh... 126 6e-028
gb|CW339531.1|CW339531 104_840_11485320_148_36140_092 Sorgh... 126 6e-028
gb|BG240109.1|BG240109 OV1_18_A05.b1_A002 Ovary 1 (OV1) Sor... 111 7e-028
gb|CN125662.1|CN125662 RHOH1_12_B03.g1_A002 Acid- and alkal... 124 2e-027
gb|CW261808.1|CW261808 104_729_11229713_148_35203_077 Sorgh... 76 2e-026
gb|CF756307.1|CF756307 DSAF1_4_G03.g1_A011 Drought-stressed... 105 9e-025
gb|CN135147.1|CN135147 OX1_30_G11.g1_A002 Oxidatively-stres... 114 2e-024
gb|CW442746.1|CW442746 fsbb001f162i18k0 Sorghum methylation... 79 8e-023
gb|CW250340.1|CW250340 104_712_11223336_148_35055_088 Sorgh... 87 1e-022
gb|CW100055.1|CW100055 104_467_11003894_116_34391_059 Sorgh... 106 5e-022
gb|CW181342.1|CW181342 104_596_11163456_116_36654_092 Sorgh... 105 9e-022
gb|CW185694.1|CW185694 104_603_11166185_148_36702_073 Sorgh... 105 9e-022
gb|BE362142.1|BE362142 DG1_84_C11.g1_A002 Dark Grown 1 (DG1... 97 1e-021
gb|CL701845.2|CL701845 SP__Ba0078E02.f SP__Ba Sorghum propi... 102 6e-021
gb|CW180919.1|CW180919 104_595_11163212_148_36646_070 Sorgh... 66 7e-021
>gb|CN124163.1|CN124163 RHOH1_3_B09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_3_B09_A002 3', mRNA sequence
Length = 695
Score = 323 bits (700), Expect = 2e-087
Identities = 125/189 (66%), Positives = 160/189 (84%)
Frame = -2 / +1
Query: 802 FNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLV 623
F+NP WPKG+AF ED WSD +YCRKNE+WY+LSKTL+E EAFAYAAKTGLD+VTICP+LV
Sbjct: 4 FSNPYWPKGKAFDEDCWSDEDYCRKNEDWYYLSKTLSEREAFAYAAKTGLDVVTICPALV 183
Query: 622 IGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCS 443
GPL+Q +N S K+ L+Y KGD+E +++ +N+VDVRDVA ALLLAYE +ASGRY+CS
Sbjct: 184 FGPLMQSILNASSKILLNYFKGDRETIENRLRNIVDVRDVADALLLAYEKPEASGRYICS 363
Query: 442 SPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIEC 263
S I+VSD++NILKT YPTY YP+ FVE + ++ Y++EKL+KLGWT RP+E+TLR+S+E
Sbjct: 364 SQPIKVSDMINILKTLYPTYPYPKNFVEMDDNSIYSSEKLQKLGWTFRPIEETLRESVES 543
Query: 262 YRAMGILN* 236
Y+A GILN*
Sbjct: 544 YKAFGILN* 570
Score = 204 bits (441), Expect(2) = 5e-053
Identities = 108/188 (57%), Positives = 114/188 (60%)
Frame = +3 / -1
Query: 231 EAQFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSM 410
+AQFRMP AL* S LSRRVSS+GL+VHPSF SFS LY+ L S ST F G* VGY VF+M
Sbjct: 575 DAQFRMPNAL*DSTLSRRVSSIGLKVHPSF*SFSELYMELSSISTKFLG*G*VGYKVFNM 396
Query: 411 FTISETLIAGELQRYRPDACRFXXXXXXXXXXXXXXXXFLGXXXXXXXXXXXXXRKTLTL 590
F ISET I ELQ YRPDA F FL R L L
Sbjct: 395 FIISETFIGCELQMYRPDASGFSYARRRASATSRTSTIFLSLFSMVSRSPLK*LRSILLL 216
Query: 591 VFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHSSFFLQYSPSDQLSSVK 770
F C KGP T GQIVT S+PV AA*AKAS S VLER Y SSFFLQ S SDQ SS K
Sbjct: 215 AFNIDCIKGPNTKAGQIVTTSNPVFAA*AKASRSDRVLER*YQSSFFLQ*SSSDQQSSSK 36
Query: 771 ASPLGQSG 794
A PLGQ G
Sbjct: 35 ALPLGQ*G 12
Score = 204 bits (439), Expect = 2e-051
Identities = 106/190 (55%), Positives = 129/190 (67%)
Frame = -1 / +3
Query: 803 VQ*S*LA*GRGLY*G*LVRWGILQKK*GMVFPF*NIGRT*GFCLCSQNWARHCNYLPIIG 624
+Q* LA*G+GL * LVR G+LQ++*G+V PF N RT*GFCLCS+N CNYLP +G
Sbjct: 3 IQ*PLLA*GQGL**RLLVR*GLLQEE*GLVLPFQNSVRT*GFCLCSKNGVGCCNYLPGLG 182
Query: 623 NWTFVATCSKYKC*SLPQLYQRRSGDS*RWTQKSCGCS*CRWCPSVGLRKSAGIRTIPLQ 444
WT A K + *+ P L+QRRS D *+ TQK CGCS*C C S G+ K+ + TI LQ
Sbjct: 183 IWTLDAVYIKCE**NTP*LFQRRS*DH*K*TQKYCGCS*CC*CSSSGI*KTRSVWTIHLQ 362
Query: 443 FTSNKSL*YCKHTEDRISNIHLPSKIR*SGR*QHIQHGEASEARVDL*AHGGHPPRQHRM 264
T+NKS *Y KH +D ISN+ L K+ +G HIQ E SEARVDL A+ G PPR+ +
Sbjct: 363 LTTNKSF*YDKHIKDFISNLPLSQKLCGNG*QLHIQF*ETSEARVDLQAYRGDPPRKC*I 542
Query: 263 LQSYGHPELS 234
LQS HPELS
Sbjct: 543 LQSIWHPELS 572
Score = 194 bits (418), Expect = 2e-048
Identities = 99/189 (52%), Positives = 120/189 (63%)
Frame = +1 / -2
Query: 235 LSSGCP*LCSIRCCLGGCPPWA*RSTLASEASPCCMCCYLPLQRIFEGKCMLDIRSSVCL 414
L+SGC LC I+ GG P A*RSTLASE S C+ P + F K LDI+S +CL
Sbjct: 571 LNSGCQMLCRIQHFRGGSPL*A*RSTLASEVSQNCIWSCHPFPQSFWDKGKLDIKSLICL 392
Query: 415 QYQRLLLLVNCRGIVLMPADFRKPTEGHQRHHEHPQDFWVHL*LSPDLL*YN*GRL*HLY 594
YQ+LLL+V+CR IV F P E HQ+HHEHPQ F V+ S DLL* +*G + +
Sbjct: 391 SYQKLLLVVSCRCIVQTLLVFHMPEEEHQQHHEHPQYF*VYFQWSHDLL*NS*GVFYYSH 212
Query: 595 LLQVATKVQLPMMGK*LQCLAQFWLHKQKPHVLPMF*KGNTIPHFFCNIPHLTSYPQ*RP 774
L+ A++VQ+P GK*LQ F LHKQKPHV F KGNT PH C+ PHLT+ RP
Sbjct: 211 LI*TASRVQIPRPGK*LQHPTPFLLHKQKPHVRTEFWKGNTNPHSSCSNPHLTNSLHQRP 32
Query: 775 RP*ASQDY* 801
P*AS+ Y*
Sbjct: 31 CP*ASKGY* 5
Score = 184 bits (396), Expect = 2e-045
Identities = 102/189 (53%), Positives = 120/189 (63%)
Frame = -3 / +2
Query: 801 SIILTGLRARPLLRIAGQMGNIAEKMRNGISFLKHWQNMRLLLMQPKLG*TL*LFAHHW* 622
S+ LTGLRARPL++ GQM A +MR GI+F K N+RLLLMQ K G L*LFA W
Sbjct: 5 SVTLTGLRARPLMKTVGQMRITAGRMRIGITFPKLCPNVRLLLMQQKRGWML*LFARPWY 184
Query: 621 LDLCCNLQ*IQVLKSSSVISKEIRR*LKMDPKILWMFVMSLVPFCWLTKICRHQDDTSAV 442
LD C+L *++V+K S ISKEI R LK+D +ILWMFVM L+ F W K + DDTSA
Sbjct: 185 LDP*CSLY*MRVVKYSLTISKEIVRPLKIDSEILWMFVMLLMLFFWHMKNQKRLDDTSAA 364
Query: 441 HQQ*ESLIL*TY*RPNIQHTLTLKNSLKRKVATHTTRRSFGS*GGPLGPWRTPSETASNA 262
H Q*+ LI *TY*R IQ TL K K +T R+F S*GGP G R PS N
Sbjct: 365 HNQ*KFLI**TY*RLYIQLTLIPKTLWKWMTTPYTVLRNFRS*GGPSGL*RRPSAKVLNP 544
Query: 261 TELWAS*TE 235
T+ AS* E
Sbjct: 545 TKHLAS*IE 571
Score = 122 bits (261), Expect(2) = 4e-029
Identities = 62/117 (52%), Positives = 74/117 (63%)
Frame = +2 / -3
Query: 359 FNEFLRVSVCWIFGLQYVYNIRDSYCW*TAEVSS*CLQIFVSQQKGTSDITNIHKIFGSI 538
F++ + V WI L YVY+IR+ Y * A+VSS F+ Q+K S+ITNIH I SI
Sbjct: 447 FHKVFGIRVSWI*SL*YVYHIRNFYWL*AADVSSRRFWFFICQKKSISNITNIHNISESI 268
Query: 539 FNYLLISFDITEEDFNTCIYCRLQQRSNYQ*WANSYNV*PSFGCISKSLMFCQCFRK 709
FN L ISF+I +E F T I RL Q S YQ ANSYN+ P F CISKSL F Q F K
Sbjct: 267 FNGLTISFEIVKEYFTTRI*YRLHQGSKYQGRANSYNIQPRFCCISKSLTFGQSFGK 97
Score = 27.2 bits (53), Expect(2) = 4e-029
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +2 / -3
Query: 767 KGLALRPVRIIEH 805
KGLALRPVR+ E+
Sbjct: 39 KGLALRPVRVTEY 1
Score = 24.9 bits (48), Expect(2) = 5e-053
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 153 LIHCLHEEERN 185
L+HCLHE +R+
Sbjct: 644 LVHCLHEPDRD 612
>gb|BM330954.1|BM330954 PIC1_67_F03.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 515
Score = 225 bits (486), Expect(2) = 3e-066
Identities = 94/111 (84%), Positives = 100/111 (90%)
Frame = -2 / +3
Query: 568 YIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYP 389
YIKGDQE V +G NLVDVRDVA ALLLAYEN QASGRYLC SPAIRVSDIVN LKT YP
Sbjct: 6 YIKGDQETVNNGSMNLVDVRDVADALLLAYENPQASGRYLCCSPAIRVSDIVNTLKTSYP 185
Query: 388 TYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
T+TYPQKFVE EGSNTY TEKLRKLGWTSRPME+TLRDS++CYRA+GILN*
Sbjct: 186 THTYPQKFVEVEGSNTYITEKLRKLGWTSRPMEETLRDSVDCYRALGILN* 338
Score = 204 bits (441), Expect(3) = 6e-061
Identities = 90/116 (77%), Positives = 93/116 (80%)
Frame = +1 / -3
Query: 223 AEGKLSSGCP*LCSIRCCLGGCPPWA*RSTLASEASPCCMCCYLPLQRIFEGKCMLDIRS 402
AE KLSSG P L S R C G PP A*RSTLASEASP MCCYLPLQRIF KC+LD+RS
Sbjct: 351 AEWKLSSGSPKLGSNRRCPAGFPP*A*RSTLASEASP*YMCCYLPLQRIFGDKCVLDMRS 172
Query: 403 SVCLQYQRLLLLVNCRGIVLMPADFRKPTEGHQRHHEHPQDFWVHL*LSPDLL*YN 570
VCLQYQRLLLLVN RG V MP DFRKPTEG QRHHEHP D W+H *LSPDLL*YN
Sbjct: 171 LVCLQYQRLLLLVNSRGTVQMPEDFRKPTEGRQRHHEHPLDSWIHY*LSPDLL*YN 4
Score = 199 bits (430), Expect(2) = 6e-055
Identities = 89/118 (75%), Positives = 98/118 (83%)
Frame = -1 / +2
Query: 572 QLYQRRSGDS*RWTQKSCGCS*CRWCPSVGLRKSAGIRTIPLQFTSNKSL*YCKHTEDRI 393
+LYQRRSGDS W +S GCS*CR PSVGLRKS+GI T+PL FTSNKSL*YCKHT+D I
Sbjct: 2 RLYQRRSGDSQ*WIHESSGCS*CR*RPSVGLRKSSGIWTVPLLFTSNKSL*YCKHTKDLI 181
Query: 392 SNIHLPSKIR*SGR*QHIQHGEASEARVDL*AHGGHPPRQHRMLQSYGHPELSFPSAL 219
SN HL KIR*SGR*QHI HGEASEARVDL*A+GG+P Q R+L S+G PELSF SAL
Sbjct: 182 SNTHLSPKIR*SGR*QHIYHGEASEARVDL*AYGGNPAGQRRLLPSFGDPELSFHSAL 355
Score = 199 bits (428), Expect(2) = 2e-054
Identities = 91/113 (80%), Positives = 94/113 (83%)
Frame = -3 / +1
Query: 573 SVISKEIRR*LKMDPKILWMFVMSLVPFCWLTKICRHQDDTSAVHQQ*ESLIL*TY*RPN 394
SVISKEIRR MDP I WMFVMSL PFCWLTKI RH D TSAVHQQ*ESLIL*T+*RP+
Sbjct: 1 SVISKEIRRQSIMDP*I*WMFVMSLTPFCWLTKILRHLDGTSAVHQQ*ESLIL*TH*RPH 180
Query: 393 IQHTLTLKNSLKRKVATHTTRRSFGS*GGPLGPWRTPSETASNATELWAS*TE 235
IQHTL KNSLK KVATH +RRSFGS*GGPLG WR P TAS ATELW S*TE
Sbjct: 181 IQHTLIPKNSLKWKVATHISRRSFGS*GGPLGLWRKPCGTASIATELWGS*TE 339
Score = 151 bits (324), Expect(2) = 1e-040
Identities = 70/99 (70%), Positives = 76/99 (76%)
Frame = +3 / -2
Query: 171 EEERNXXXXXXXXXXXQS*REAQFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLL 350
E ++ QS* EAQFR+P A * S LSRRVSS+GLEVHPSFRSFSV+YVLL
Sbjct: 403 EIQKKLKIAAAAAAKAQS*MEAQFRIPKAR*QSTLSRRVSSIGLEVHPSFRSFSVIYVLL 224
Query: 351 PSASTNF*G*VYVGYSVFSMFTISETLIAGELQRYRPDA 467
PS STNF G*V VGY VFS+FTISETLIAGE QRYRPDA
Sbjct: 223 PSTSTNFWG*VCVGYEVFSVFTISETLIAGEQQRYRPDA 107
Score = 138 bits (295), Expect(3) = 1e-035
Identities = 60/75 (80%), Positives = 63/75 (84%)
Frame = +2 / -1
Query: 347 ATFRFNEFLRVSVCWIFGLQYVYNIRDSYCW*TAEVSS*CLQIFVSQQKGTSDITNIHKI 526
ATF FNEFL +SVCWI GL VYNIRDSYCW*TAEV S CL+IFVSQQKG SDITNIH I
Sbjct: 227 ATFHFNEFLGISVCWI*GL*CVYNIRDSYCW*TAEVPSRCLRIFVSQQKGVSDITNIH*I 48
Query: 527 FGSIFNYLLISFDIT 571
GSI + LLISFDIT
Sbjct: 47 HGSIIDCLLISFDIT 3
Score = 48.7 bits (100), Expect(2) = 3e-066
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = -1 / +1
Query: 149 FRIRWYRN*RSGSWKMLLLKMNLDTI 72
FRI W RN*+ GSW+ML+L+MNL+TI
Sbjct: 433 FRISWCRN*KRGSWEMLMLRMNLNTI 510
Score = 42.3 bits (86), Expect(3) = 6e-061
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +3 / -3
Query: 72 DSIQIHF*QQHLP*STSLVPIPAYSE 149
D +Q+H * QHLP S LVP PAYSE
Sbjct: 510 DGVQVHS*HQHLPRSPFLVPTPAYSE 433
Score = 36.8 bits (74), Expect(2) = 1e-040
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +2 / -2
Query: 83 NSFLAAASSMIHFSSSYTSVF*I 151
+SFLA+AS I FSSSYTS+F*I
Sbjct: 499 SSFLASASPTIPFSSSYTSLF*I 431
Score = 36.3 bits (73), Expect(2) = 6e-055
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -3 / +3
Query: 150 IQNTLV*ELEKWIMEDAAAKNEFGYY 73
IQN LV*ELEK I+ DA AKNE ++
Sbjct: 432 IQNKLV*ELEKGIVGDADAKNELEHH 509
Score = 35.9 bits (72), Expect(2) = 2e-054
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -2 / +2
Query: 151 NSEYAGIGTREVDHGRCCC*K* 86
NSE AG+GTR+ D GRC C*+*
Sbjct: 431 NSE*AGVGTRKGDRGRC*C*E* 496
Score = 28.1 bits (55), Expect(3) = 1e-035
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1 / -1
Query: 109 HDPLL*FLYQRILN 150
HDPL *FL+Q ILN
Sbjct: 473 HDPLF*FLHQLILN 432
Score = 27.6 bits (54), Expect(3) = 6e-061
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / -2
Query: 147 EFLIHCLHEE 176
+FLIHCLHEE
Sbjct: 430 KFLIHCLHEE 401
Score = 23.5 bits (45), Expect(3) = 1e-035
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2 / -1
Query: 239 VQDAHSSVAFDAVSE 283
VQD SSVA DAV +
Sbjct: 335 VQDPQSSVAIDAVPQ 291
>gb|CN125588.1|CN125588 RHOH1_12_B03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_12_B03_A002 3', mRNA sequence
Length = 763
Score = 136 bits (291), Expect(2) = 1e-060
Identities = 56/106 (52%), Positives = 67/106 (63%)
Frame = -2 / +1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KA EAK K V NP WP+ E E WSD E+CR N+ WY LSKTLAE E
Sbjct: 1 KASSEAKVKGVVVVSSVAAVMVNPGWPQDEVMDEACWSDVEFCRTNQNWYCLSKTLAETE 180
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEI 545
AF YA +TGLD+V++CPSLVIGPL Q VN S + + +KGD E+
Sbjct: 181 AFDYAKRTGLDVVSVCPSLVIGPLRQSTVNASSSIIVDCLKGDHEV 318
Score = 119 bits (254), Expect(2) = 1e-060
Identities = 48/98 (48%), Positives = 67/98 (68%)
Frame = -2 / +1
Query: 529 KNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEG 350
+N VDVRDVA ALLL YE +ASGRY+C + A +VSD++ +LK YP Y + K V+
Sbjct: 331 RNFVDVRDVANALLLVYETPEASGRYICDANARQVSDVIALLKNWYPAYNHATKLVQVSD 510
Query: 349 SNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
++++KL LGW R E+TLRDS+E + A G+L+*
Sbjct: 511 EPLFSSKKLEALGWKFRTFEETLRDSVESFTAAGVLD* 624
Score = 81.7 bits (172), Expect(2) = 5e-022
Identities = 40/69 (57%), Positives = 44/69 (63%)
Frame = +3 / -3
Query: 588 LVFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHSSFFLQYSPSDQLSSV 767
L FT C KGPIT DGQ T SSPVL A*+ AS SA+VLER+Y LQ S SDQ +S
Sbjct: 275 LAFTVDCRKGPITRDGQTDTTSSPVLLA*SNASVSASVLERQYQF*LVLQNSTSDQQASS 96
Query: 768 KASPLGQSG 794
S GQ G
Sbjct: 95 MTSSWGQPG 69
Score = 44.1 bits (90), Expect(2) = 5e-022
Identities = 31/77 (40%), Positives = 36/77 (46%)
Frame = +3 / -3
Query: 237 QFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSMFT 416
Q R P A+ S LS RVSS L PS SF L T+ *+ GY FS
Sbjct: 623 QSRTPAAVKDSTLSLRVSSNVLNFQPSASSFLELNKGSSLTCTSLVA*L*AGYQFFSSAM 444
Query: 417 ISETLIAGELQRYRPDA 467
S+T +A Q RPDA
Sbjct: 443 TSDTCLAFASQM*RPDA 393
>gb|CN127950.1|CN127950 RHOH1_26_C10.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_26_C10_A002 3', mRNA sequence
Length = 800
Score = 231 bits (499), Expect = 1e-059
Identities = 92/145 (63%), Positives = 121/145 (83%)
Frame = -2 / +1
Query: 670 AAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGAL 491
AAKTGLD+VTICP+LV GPL+Q +N S K+ L+Y KGD+E +++ +N+VDVRDVA AL
Sbjct: 1 AAKTGLDVVTICPALVFGPLMQSILNASSKILLNYFKGDRETIENRLRNIVDVRDVADAL 180
Query: 490 LLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLG 311
LLAYE +ASGRY+CSS I+VSD++NILKT YPTY YP+ FVE + ++ Y++EKL+KLG
Sbjct: 181 LLAYEKPEASGRYICSSQPIKVSDMINILKTLYPTYPYPKNFVEMDDNSIYSSEKLQKLG 360
Query: 310 WTSRPMEDTLRDSIECYRAMGILN* 236
WT RP+E+TLR+S+E Y+A GILN*
Sbjct: 361 WTFRPIEETLRESVESYKAFGILN* 435
Score = 150 bits (322), Expect = 3e-035
Identities = 77/145 (53%), Positives = 94/145 (64%)
Frame = -1 / +3
Query: 668 SQNWARHCNYLPIIGNWTFVATCSKYKC*SLPQLYQRRSGDS*RWTQKSCGCS*CRWCPS 489
S+N CNYLP +G WT A K + *+ P L+QRRS D *+ TQK CGCS*C C S
Sbjct: 3 SKNGVGCCNYLPGLGIWTLDAVYIKCE**NTP*LFQRRS*DH*K*TQKYCGCS*CC*CSS 182
Query: 488 VGLRKSAGIRTIPLQFTSNKSL*YCKHTEDRISNIHLPSKIR*SGR*QHIQHGEASEARV 309
G+ K+ + TI LQ T+NKS *Y KH +D ISN+ L K+ +G HIQ E SEARV
Sbjct: 183 SGI*KTRSVWTIHLQLTTNKSF*YDKHIKDFISNLPLSQKLCGNG*QLHIQF*ETSEARV 362
Query: 308 DL*AHGGHPPRQHRMLQSYGHPELS 234
DL A+ G PPR+ +LQS HPELS
Sbjct: 363 DLQAYRGDPPRKC*ILQSIWHPELS 437
Score = 149 bits (321), Expect(2) = 1e-036
Identities = 77/146 (52%), Positives = 83/146 (56%)
Frame = +3 / -1
Query: 231 EAQFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSM 410
+AQFRMP AL* S LSRRVSS+GL+VHPSF SFS LY+ L S ST F G* VGY VF+M
Sbjct: 440 DAQFRMPNAL*DSTLSRRVSSIGLKVHPSF*SFSELYMELSSISTKFLG*G*VGYKVFNM 261
Query: 411 FTISETLIAGELQRYRPDACRFXXXXXXXXXXXXXXXXFLGXXXXXXXXXXXXXRKTLTL 590
F ISET I ELQ YRPDA F FL R L L
Sbjct: 260 FIISETFIGCELQMYRPDASGFSYARRRASATSRTSTIFLSLFSMVSRSPLK*LRSILLL 81
Query: 591 VFTAGCNKGPITNDGQIVTMSSPVLA 668
F C KGP T GQIVT S+PV A
Sbjct: 80 AFNIDCIKGPNTKAGQIVTTSNPVFA 3
Score = 137 bits (293), Expect = 3e-031
Identities = 72/145 (49%), Positives = 90/145 (62%)
Frame = +1 / -2
Query: 235 LSSGCP*LCSIRCCLGGCPPWA*RSTLASEASPCCMCCYLPLQRIFEGKCMLDIRSSVCL 414
L+SGC LC I+ GG P A*RSTLASE S C+ P + F K LDI+S +CL
Sbjct: 436 LNSGCQMLCRIQHFRGGSPL*A*RSTLASEVSQNCIWSCHPFPQSFWDKGKLDIKSLICL 257
Query: 415 QYQRLLLLVNCRGIVLMPADFRKPTEGHQRHHEHPQDFWVHL*LSPDLL*YN*GRL*HLY 594
YQ+LLL+V+CR IV F P E HQ+HHEHPQ F V+ S DLL* +*G + +
Sbjct: 256 SYQKLLLVVSCRCIVQTLLVFHMPEEEHQQHHEHPQYF*VYFQWSHDLL*NS*GVFYYSH 77
Query: 595 LLQVATKVQLPMMGK*LQCLAQFWL 669
L+ A++VQ+P GK*LQ F L
Sbjct: 76 LI*TASRVQIPRPGK*LQHPTPFLL 2
Score = 131 bits (280), Expect = 2e-029
Identities = 76/145 (52%), Positives = 88/145 (60%)
Frame = -3 / +2
Query: 669 QPKLG*TL*LFAHHW*LDLCCNLQ*IQVLKSSSVISKEIRR*LKMDPKILWMFVMSLVPF 490
Q K G L*LFA W LD C+L *++V+K S ISKEI R LK+D +ILWMFVM L+ F
Sbjct: 2 QQKRGWML*LFARPWYLDP*CSLY*MRVVKYSLTISKEIVRPLKIDSEILWMFVMLLMLF 181
Query: 489 CWLTKICRHQDDTSAVHQQ*ESLIL*TY*RPNIQHTLTLKNSLKRKVATHTTRRSFGS*G 310
W K + DDTSA H Q*+ LI *TY*R IQ TL K K +T R+F S*G
Sbjct: 182 FWHMKNQKRLDDTSAAHNQ*KFLI**TY*RLYIQLTLIPKTLWKWMTTPYTVLRNFRS*G 361
Query: 309 GPLGPWRTPSETASNATELWAS*TE 235
GP G R PS N T+ AS* E
Sbjct: 362 GPSGL*RRPSAKVLNPTKHLAS*IE 436
Score = 105 bits (225), Expect = 7e-022
Identities = 53/104 (50%), Positives = 65/104 (62%)
Frame = +2 / -3
Query: 359 FNEFLRVSVCWIFGLQYVYNIRDSYCW*TAEVSS*CLQIFVSQQKGTSDITNIHKIFGSI 538
F++ + V WI L YVY+IR+ Y * A+VSS F+ Q+K S+ITNIH I SI
Sbjct: 312 FHKVFGIRVSWI*SL*YVYHIRNFYWL*AADVSSRRFWFFICQKKSISNITNIHNISESI 133
Query: 539 FNYLLISFDITEEDFNTCIYCRLQQRSNYQ*WANSYNV*PSFGC 670
FN L ISF+I +E F T I RL Q S YQ ANSYN+ P F C
Sbjct: 132 FNGLTISFEIVKEYFTTRI*YRLHQGSKYQGRANSYNIQPRFCC 1
Score = 24.9 bits (48), Expect(2) = 1e-036
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 153 LIHCLHEEERN 185
L+HCLHE +R+
Sbjct: 509 LVHCLHEPDRD 477
>gb|CX614598.1|CX614598 GABR1_15_C04.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_15_C04_A002 3', mRNA sequence
Length = 744
Score = 130 bits (278), Expect(2) = 6e-059
Identities = 52/98 (53%), Positives = 63/98 (64%)
Frame = -2 / +3
Query: 838 KRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKT 659
KR V NP WP+ E E WSD E+CR N+ WY LSKTLAE EAF YA +T
Sbjct: 3 KRVVVVSSVAAVMVNPGWPQDEVMDEACWSDVEFCRTNQNWYCLSKTLAETEAFDYAKRT 182
Query: 658 GLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEI 545
GLD+V++CPSLVIGPL Q VN S + + +KGD E+
Sbjct: 183 GLDVVSVCPSLVIGPLRQSTVNASSSIIVDCLKGDHEV 296
Score = 119 bits (254), Expect(2) = 6e-059
Identities = 48/98 (48%), Positives = 67/98 (68%)
Frame = -2 / +3
Query: 529 KNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEG 350
+N VDVRDVA ALLL YE +ASGRY+C + A +VSD++ +LK YP Y + K V+
Sbjct: 309 RNFVDVRDVANALLLVYETPEASGRYICDANARQVSDVIALLKNWYPAYNHATKLVQVSD 488
Query: 349 SNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
++++KL LGW R E+TLRDS+E + A G+L+*
Sbjct: 489 EPLFSSKKLEALGWKFRTFEETLRDSVESFTAAGVLD* 602
Score = 81.7 bits (172), Expect(2) = 5e-022
Identities = 40/69 (57%), Positives = 44/69 (63%)
Frame = +3 / -3
Query: 588 LVFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHSSFFLQYSPSDQLSSV 767
L FT C KGPIT DGQ T SSPVL A*+ AS SA+VLER+Y LQ S SDQ +S
Sbjct: 253 LAFTVDCRKGPITRDGQTDTTSSPVLLA*SNASVSASVLERQYQF*LVLQNSTSDQQASS 74
Query: 768 KASPLGQSG 794
S GQ G
Sbjct: 73 MTSSWGQPG 47
Score = 44.1 bits (90), Expect(2) = 5e-022
Identities = 31/77 (40%), Positives = 36/77 (46%)
Frame = +3 / -3
Query: 237 QFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSMFT 416
Q R P A+ S LS RVSS L PS SF L T+ *+ GY FS
Sbjct: 601 QSRTPAAVKDSTLSLRVSSNVLNFQPSASSFLELNKGSSLTCTSLVA*L*AGYQFFSSAM 422
Query: 417 ISETLIAGELQRYRPDA 467
S+T +A Q RPDA
Sbjct: 421 TSDTCLAFASQM*RPDA 371
>gb|CN146030.1|CN146030 WOUND1_37_A04.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_37_A04_A002 3', mRNA sequence
Length = 732
Score = 129 bits (277), Expect(2) = 9e-059
Identities = 49/84 (58%), Positives = 60/84 (71%)
Frame = -2 / +2
Query: 796 NPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIG 617
NP WP+ E E WSD E+CR N+ WY LSKTLAE EAF YA +TGLD+V++CPSLVIG
Sbjct: 35 NPGWPQDEVMDEACWSDVEFCRTNQNWYCLSKTLAETEAFDYAKRTGLDVVSVCPSLVIG 214
Query: 616 PLLQPAVNTSVKVFLSYIKGDQEI 545
PL Q VN S + + +KGD E+
Sbjct: 215 PLRQSTVNASSSIIVDCLKGDHEV 286
Score = 119 bits (254), Expect(2) = 9e-059
Identities = 48/98 (48%), Positives = 67/98 (68%)
Frame = -2 / +2
Query: 529 KNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEG 350
+N VDVRDVA ALLL YE +ASGRY+C + A +VSD++ +LK YP Y + K V+
Sbjct: 299 RNFVDVRDVANALLLVYETPEASGRYICDANARQVSDVIALLKNWYPAYNHATKLVQVSD 478
Query: 349 SNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
++++KL LGW R E+TLRDS+E + A G+L+*
Sbjct: 479 EPLFSSKKLEALGWKFRTFEETLRDSVESFTAAGVLD* 592
Score = 81.7 bits (172), Expect(2) = 5e-022
Identities = 40/69 (57%), Positives = 44/69 (63%)
Frame = +3 / -1
Query: 588 LVFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHSSFFLQYSPSDQLSSV 767
L FT C KGPIT DGQ T SSPVL A*+ AS SA+VLER+Y LQ S SDQ +S
Sbjct: 243 LAFTVDCRKGPITRDGQTDTTSSPVLLA*SNASVSASVLERQYQF*LVLQNSTSDQQASS 64
Query: 768 KASPLGQSG 794
S GQ G
Sbjct: 63 MTSSWGQPG 37
Score = 44.1 bits (90), Expect(2) = 5e-022
Identities = 31/77 (40%), Positives = 36/77 (46%)
Frame = +3 / -1
Query: 237 QFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSMFT 416
Q R P A+ S LS RVSS L PS SF L T+ *+ GY FS
Sbjct: 591 QSRTPAAVKDSTLSLRVSSNVLNFQPSASSFLELNKGSSLTCTSLVA*L*AGYQFFSSAM 412
Query: 417 ISETLIAGELQRYRPDA 467
S+T +A Q RPDA
Sbjct: 411 TSDTCLAFASQM*RPDA 361
>gb|CN132257.1|CN132257 OX1_5_C03.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_5_C03_A002 3', mRNA sequence
Length = 673
Score = 187 bits (403), Expect(2) = 5e-053
Identities = 71/140 (50%), Positives = 94/140 (67%)
Frame = -2 / +2
Query: 796 NPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIG 617
NP WP G E WSD +C KNE WY +KT+AE A Y K GL++VT+CP +V+G
Sbjct: 8 NPSWPHGRIKDESCWSDKNFCMKNENWYTAAKTIAEETALEYGEKNGLNVVTVCPCIVLG 187
Query: 616 PLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSP 437
PLLQP +NT+ ++ + IKG ++K+ P N+VDVRDVA ALLL YE + +SGRY+C+
Sbjct: 188 PLLQPLINTTSELLIYIIKGGPRLMKNLPWNIVDVRDVADALLLVYEKVGSSGRYICAPD 367
Query: 436 AIRVSDIVNILKTEYPTYTY 377
I +DIV +LK YP Y Y
Sbjct: 368 RISTNDIVKLLKKSYPNYNY 427
Score = 42.3 bits (86), Expect(2) = 5e-053
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = -2 / +2
Query: 334 TEKLRKLGWTSRPMEDTLRDSIECYRAMGIL 242
+EKL+ LGW R ME+TL DS+E + G L
Sbjct: 476 SEKLKSLGWKPRKMEETLLDSVEYFEKAGFL 568
>gb|CD213624.1|CD213624 HS1_52_G04.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_52_G04_A012 3', mRNA sequence
Length = 604
Score = 118 bits (253), Expect(2) = 8e-045
Identities = 48/98 (48%), Positives = 67/98 (68%)
Frame = -2 / +3
Query: 529 KNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEG 350
+N VDVRDVA ALLL YE +ASGRY+C + A +VSD++ +LK YP Y + K V+
Sbjct: 174 RNFVDVRDVADALLLVYETPEASGRYICDANARQVSDVIALLKNWYPAYNHATKLVQVSD 353
Query: 349 SNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
++++KL LGW R E+TLRDS+E + A G+L+*
Sbjct: 354 EPLFSSKKLEALGWKFRTFEETLRDSVESFTAAGVLD* 467
Score = 83.5 bits (176), Expect(2) = 8e-045
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = -2 / +3
Query: 703 KTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEI 545
KTLAE EAF YA +TGLD+V++CPSLVIGPLLQ VN S + + +KGD E+
Sbjct: 3 KTLAETEAFDYAKRTGLDVVSVCPSLVIGPLLQSTVNASSSIIVDCLKGDHEV 161
>gb|BZ780254.1|BZ780254 ii38c12.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ii38c12, DNA sequence
Length = 515
Score = 126 bits (269), Expect(2) = 2e-043
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = -2 / +2
Query: 721 EWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQ 551
EWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQP VN SVK+FL YIKG +
Sbjct: 89 EWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPTVNASVKIFLGYIKGGE 259
Score = 124 bits (266), Expect(2) = 4e-040
Identities = 48/55 (87%), Positives = 52/55 (94%)
Frame = -1 / +1
Query: 722 GMVFPF*NIGRT*GFCLCSQNWARHCNYLPIIGNWTFVATCSKYKC*SLPQLYQR 558
GMVFPF*N GRT*GFCLCS+NWARHCNYLPIIG+WTFVAT SK KC*+LP+LYQR
Sbjct: 88 GMVFPF*NTGRT*GFCLCSKNWARHCNYLPIIGDWTFVATHSKCKC*NLPRLYQR 252
Score = 122 bits (261), Expect(2) = 8e-045
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +2 / -2
Query: 557 SFDITEEDFNTCIYCRLQQRSNYQ*WANSYNV*PSFGCISKSLMFCQCFRKE 712
+FDITEEDFNTCIYC LQQRSN+Q*WANSYNV*PSF CISKSLMFCQCFRKE
Sbjct: 253 TFDITEEDFNTCIYCGLQQRSNHQ*WANSYNV*PSFCCISKSLMFCQCFRKE 98
Score = 121 bits (258), Expect = 2e-026
Identities = 52/55 (94%), Positives = 53/55 (96%)
Frame = -3 / +3
Query: 723 RNGISFLKHWQNMRLLLMQPKLG*TL*LFAHHW*LDLCCNLQ*IQVLKSSSVISK 559
RNGISFLKHWQNMRLLLMQ KLG*TL*LFAHHW*LDLCCN Q*+QVLKSSSVISK
Sbjct: 87 RNGISFLKHWQNMRLLLMQQKLG*TL*LFAHHW*LDLCCNPQ*MQVLKSSSVISK 251
Score = 109 bits (233), Expect(2) = 3e-023
Identities = 48/55 (87%), Positives = 50/55 (90%)
Frame = +1 / -1
Query: 559 L*YN*GRL*HLYLLQVATKVQLPMMGK*LQCLAQFWLHKQKPHVLPMF*KGNTIP 723
L*YN GR *HL+LL VATKVQ PMMGK*LQCLAQF LHKQKPHVLP+F*KGNTIP
Sbjct: 251 L*YNRGRF*HLHLLWVATKVQSPMMGK*LQCLAQFLLHKQKPHVLPVF*KGNTIP 87
Score = 106 bits (227), Expect(2) = 8e-036
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = +3 / -3
Query: 573 RKTLTLVFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHS 722
RK LTL FT GCNKGPITNDGQIVTMSSPV AA*AKASCSA+VLERKYHS
Sbjct: 237 RKILTLAFTVGCNKGPITNDGQIVTMSSPVFAA*AKASCSASVLERKYHS 88
Score = 81.7 bits (172), Expect(2) = 8e-045
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = +1 / -3
Query: 442 NCRGIVLMPADFRKPTEGHQRHHEHPQDFWVHL*LSPDLL 561
N RG V MP DFRKPTEG QRHHEHP D W+H *LSPDLL
Sbjct: 513 NSRGTVQMPEDFRKPTEGRQRHHEHPLDSWIHY*LSPDLL 394
Score = 73.5 bits (154), Expect(2) = 2e-043
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = -2 / +3
Query: 559 GDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSS 440
GDQE V +G NLVDVRDVA ALLLAYEN QASGRYLC S
Sbjct: 396 GDQETVNNGSMNLVDVRDVADALLLAYENPQASGRYLCCS 515
Score = 67.0 bits (140), Expect(2) = 8e-036
Identities = 33/49 (67%), Positives = 35/49 (71%)
Frame = +2 / -1
Query: 443 TAEVSS*CLQIFVSQQKGTSDITNIHKIFGSIFNYLLISFDITEEDFNT 589
TAEV S CL+IFVSQQKG SDITNIH I GSI + LLIS T F T
Sbjct: 512 TAEVPSRCLRIFVSQQKGVSDITNIH*IHGSIIDCLLISCTRTALTFKT 366
Score = 63.8 bits (133), Expect(2) = 4e-040
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = -1 / +2
Query: 560 RRSGDS*RWTQKSCGCS*CRWCPSVGLRKSAGIRTIPLQF 441
RRSGDS W +S GCS*CR PSVGLRKS+GI T+PL F
Sbjct: 395 RRSGDSQ*WIHESSGCS*CR*RPSVGLRKSSGIWTVPLLF 514
Score = 22.1 bits (42), Expect(2) = 3e-023
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3 / -2
Query: 441 ELQRYRPDA 467
E QRYRPDA
Sbjct: 514 EQQRYRPDA 488
>gb|BM328946.1|BM328946 PIC1_31_E07.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 574
Score = 149 bits (320), Expect(2) = 1e-043
Identities = 60/69 (86%), Positives = 65/69 (94%)
Frame = -2 / +2
Query: 442 SPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIEC 263
SPAIRVSDIVN LKT YPT+TYPQKFVE EGSNTY TEKLRKLGWTSRPME+TLRDS++C
Sbjct: 2 SPAIRVSDIVNTLKTSYPTHTYPQKFVEVEGSNTYITEKLRKLGWTSRPMEETLRDSVDC 181
Query: 262 YRAMGILN* 236
YRA+GILN*
Sbjct: 182 YRALGILN* 208
Score = 134 bits (287), Expect(3) = 2e-040
Identities = 63/91 (69%), Positives = 69/91 (75%)
Frame = +3 / -2
Query: 171 EEERNXXXXXXXXXXXQS*REAQFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLL 350
E ++ QS* EAQFR+P A * S LSRRVSS+GLEVHPSFRSFSV+YVLL
Sbjct: 273 EIQKKLKIAAAAAAKAQS*MEAQFRIPKAR*QSTLSRRVSSIGLEVHPSFRSFSVIYVLL 94
Query: 351 PSASTNF*G*VYVGYSVFSMFTISETLIAGE 443
PS STNF G*V VGY VFS+FTISETLIAGE
Sbjct: 93 PSTSTNFWG*VCVGYEVFSVFTISETLIAGE 1
Score = 133 bits (286), Expect(2) = 2e-035
Identities = 59/75 (78%), Positives = 64/75 (85%)
Frame = -1 / +1
Query: 443 FTSNKSL*YCKHTEDRISNIHLPSKIR*SGR*QHIQHGEASEARVDL*AHGGHPPRQHRM 264
FTSNKSL*YCKHT+D ISN HL KIR*SGR*QHI HGEASEARVDL*A+GG+P Q R+
Sbjct: 1 FTSNKSL*YCKHTKDLISNTHLSPKIR*SGR*QHIYHGEASEARVDL*AYGGNPAGQRRL 180
Query: 263 LQSYGHPELSFPSAL 219
L S+G PELSF SAL
Sbjct: 181 LPSFGDPELSFHSAL 225
Score = 122 bits (261), Expect(2) = 8e-032
Identities = 56/69 (81%), Positives = 59/69 (85%)
Frame = -3 / +3
Query: 441 HQQ*ESLIL*TY*RPNIQHTLTLKNSLKRKVATHTTRRSFGS*GGPLGPWRTPSETASNA 262
HQQ*ESLIL*T+*RP+IQHTL KNSLK KVATH +RRSFGS*GGPLG WR P TAS A
Sbjct: 3 HQQ*ESLIL*TH*RPHIQHTLIPKNSLKWKVATHISRRSFGS*GGPLGLWRKPCGTASIA 182
Query: 261 TELWAS*TE 235
TELW S*TE
Sbjct: 183 TELWGS*TE 209
Score = 119 bits (255), Expect(2) = 4e-031
Identities = 56/73 (76%), Positives = 58/73 (79%)
Frame = +1 / -3
Query: 223 AEGKLSSGCP*LCSIRCCLGGCPPWA*RSTLASEASPCCMCCYLPLQRIFEGKCMLDIRS 402
AE KLSSG P L S R C G PP A*RSTLASEASP MCCYLPLQRIF KC+LD+RS
Sbjct: 221 AEWKLSSGSPKLGSNRRCPAGFPP*A*RSTLASEASP*YMCCYLPLQRIFGDKCVLDMRS 42
Query: 403 SVCLQYQRLLLLV 441
VCLQYQRLLLLV
Sbjct: 41 LVCLQYQRLLLLV 3
Score = 48.7 bits (100), Expect(2) = 1e-043
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = -1 / +3
Query: 149 FRIRWYRN*RSGSWKMLLLKMNLDTI 72
FRI W RN*+ GSW+ML+L+MNL+TI
Sbjct: 303 FRISWCRN*KRGSWEMLMLRMNLNTI 380
Score = 44.1 bits (90), Expect(3) = 2e-040
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +3 / -3
Query: 54 RQAQMMDSIQIHF*QQHLP*STSLVPIPAYSE 149
RQ D +Q+H * QHLP S LVP PAYSE
Sbjct: 398 RQKLRNDGVQVHS*HQHLPRSPFLVPTPAYSE 303
Score = 37.3 bits (75), Expect(2) = 2e-035
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -2 / +1
Query: 151 NSEYAGIGTREVDHGRCCC*K*IWILSIICAC 56
NSE AG+GTR+ D GRC C*+* S + C
Sbjct: 301 NSE*AGVGTRKGDRGRC*C*E*T*TPSFLSFC 396
Score = 36.8 bits (74), Expect(2) = 4e-031
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +2 / -2
Query: 83 NSFLAAASSMIHFSSSYTSVF*I 151
+SFLA+AS I FSSSYTS+F*I
Sbjct: 369 SSFLASASPTIPFSSSYTSLF*I 301
Score = 36.3 bits (73), Expect(2) = 8e-032
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -3 / +2
Query: 150 IQNTLV*ELEKWIMEDAAAKNEFGYY 73
IQN LV*ELEK I+ DA AKNE ++
Sbjct: 302 IQNKLV*ELEKGIVGDADAKNELEHH 379
Score = 27.6 bits (54), Expect(3) = 2e-040
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / -2
Query: 147 EFLIHCLHEE 176
+FLIHCLHEE
Sbjct: 300 KFLIHCLHEE 271
>gb|BE357345.1|BE357345 DG1_148_D02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 719
Score = 146 bits (314), Expect(3) = 3e-037
Identities = 56/121 (46%), Positives = 84/121 (69%)
Frame = -2 / +1
Query: 739 YCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIK 560
+C+ NE+WY ++K +AE A YA K GL++VT+CP++ +GPLL+P VN S + L IK
Sbjct: 7 FCKMNEDWYMVAKVIAEKTALEYAEKNGLNVVTVCPTMALGPLLRPMVNVSHEFLLYIIK 186
Query: 559 GDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYT 380
G ++++ P ++VDVRDVA ALLL YE +++ RY+C+ I D+VN+LK +P Y
Sbjct: 187 GGPTVMRNIPWHIVDVRDVADALLLVYEKEKSARRYICAPNYISAIDLVNMLKKAHPNYN 366
Query: 379 Y 377
Y
Sbjct: 367 Y 369
Score = 30.4 bits (60), Expect(3) = 3e-037
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / +1
Query: 301 RPMEDTLRDSIECYRAMGIL 242
+ + TL DS+ECY MG+L
Sbjct: 457 KTLHKTLMDSVECYEKMGLL 516
Score = 21.7 bits (41), Expect(3) = 3e-037
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2 / +1
Query: 334 TEKLRKLGWTSR 299
+EKL+ LGW R
Sbjct: 421 SEKLKNLGWKPR 456
>gb|CW032378.1|CW032378 104_261_10501343_115_30364 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10501343, DNA
sequence
Length = 456
Score = 126 bits (269), Expect(2) = 6e-034
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = -2 / +2
Query: 721 EWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQ 551
EWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQP VN SVK+FL YIKG +
Sbjct: 77 EWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPTVNASVKIFLGYIKGGE 247
Score = 124 bits (266), Expect(2) = 4e-032
Identities = 48/55 (87%), Positives = 52/55 (94%)
Frame = -1 / +1
Query: 722 GMVFPF*NIGRT*GFCLCSQNWARHCNYLPIIGNWTFVATCSKYKC*SLPQLYQR 558
GMVFPF*N GRT*GFCLCS+NWARHCNYLPIIG+WTFVAT SK KC*+LP+LYQR
Sbjct: 76 GMVFPF*NTGRT*GFCLCSKNWARHCNYLPIIGDWTFVATHSKCKC*NLPRLYQR 240
Score = 122 bits (261), Expect(2) = 4e-037
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +2 / -3
Query: 557 SFDITEEDFNTCIYCRLQQRSNYQ*WANSYNV*PSFGCISKSLMFCQCFRKE 712
+FDITEEDFNTCIYC LQQRSN+Q*WANSYNV*PSF CISKSLMFCQCFRKE
Sbjct: 241 TFDITEEDFNTCIYCGLQQRSNHQ*WANSYNV*PSFCCISKSLMFCQCFRKE 86
Score = 121 bits (258), Expect = 2e-026
Identities = 52/55 (94%), Positives = 53/55 (96%)
Frame = -3 / +3
Query: 723 RNGISFLKHWQNMRLLLMQPKLG*TL*LFAHHW*LDLCCNLQ*IQVLKSSSVISK 559
RNGISFLKHWQNMRLLLMQ KLG*TL*LFAHHW*LDLCCN Q*+QVLKSSSVISK
Sbjct: 75 RNGISFLKHWQNMRLLLMQQKLG*TL*LFAHHW*LDLCCNPQ*MQVLKSSSVISK 239
Score = 109 bits (233), Expect = 5e-023
Identities = 48/55 (87%), Positives = 50/55 (90%)
Frame = +1 / -2
Query: 559 L*YN*GRL*HLYLLQVATKVQLPMMGK*LQCLAQFWLHKQKPHVLPMF*KGNTIP 723
L*YN GR *HL+LL VATKVQ PMMGK*LQCLAQF LHKQKPHVLP+F*KGNTIP
Sbjct: 239 L*YNRGRF*HLHLLWVATKVQSPMMGK*LQCLAQFLLHKQKPHVLPVF*KGNTIP 75
Score = 106 bits (227), Expect(2) = 2e-028
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = +3 / -1
Query: 573 RKTLTLVFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHS 722
RK LTL FT GCNKGPITNDGQIVTMSSPV AA*AKASCSA+VLERKYHS
Sbjct: 225 RKILTLAFTVGCNKGPITNDGQIVTMSSPVFAA*AKASCSASVLERKYHS 76
Score = 55.6 bits (115), Expect(2) = 4e-037
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +1 / -1
Query: 487 TEGHQRHHEHPQDFWVHL*LSPDLL 561
TEG QRHHEHP D W+H *LSPDLL
Sbjct: 456 TEGRQRHHEHPLDSWIHY*LSPDLL 382
Score = 42.3 bits (86), Expect(2) = 2e-028
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = +2 / -2
Query: 488 QKGTSDITNIHKIFGSIFNYLLISFDITEEDFNT 589
QKG SDITNIH I GSI + LLIS T F T
Sbjct: 455 QKGVSDITNIH*IHGSIIDCLLISCTRTALTFKT 354
Score = 41.4 bits (84), Expect(2) = 6e-034
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -2 / +3
Query: 559 GDQEIVKDGPKNLVDVRDVAGALL 488
GDQE V +G NLVDVRDVA ALL
Sbjct: 384 GDQETVNNGSMNLVDVRDVADALL 455
Score = 36.8 bits (74), Expect(2) = 4e-032
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -1 / +2
Query: 560 RRSGDS*RWTQKSCGCS*CRWCPS 489
RRSGDS W +S GCS*CR PS
Sbjct: 383 RRSGDSQ*WIHESSGCS*CR*RPS 454
>gb|CL178820.1|CL178820 104_387_10894861_116_31906_157 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894861, DNA
sequence
Length = 746
Score = 92.3 bits (195), Expect(2) = 1e-036
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = -2 / +1
Query: 718 WYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKG 557
WYFLSKTLAE AFAYA +TGLD+V++CPS +GPLLQP VN S + Y+KG
Sbjct: 61 WYFLSKTLAERAAFAYAKETGLDVVSVCPSWCLGPLLQPTVNNSSLTLIDYLKG 222
Score = 82.6 bits (174), Expect(2) = 1e-036
Identities = 33/64 (51%), Positives = 48/64 (75%)
Frame = -2 / +3
Query: 559 GDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYT 380
GD++ V D KN+VDVRDVA AL+L YE +ASGRY+C S + +++I++I+K+ YP +
Sbjct: 285 GDRDTVDDKMKNVVDVRDVAEALVLVYETPEASGRYICRSYPMSMTEILDIIKSFYPNLS 464
Query: 379 YPQK 368
YP K
Sbjct: 465 YPNK 476
>gb|CW192819.1|CW192819 104_615_11179234_148_36775_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11179234, DNA
sequence
Length = 666
Score = 92.3 bits (195), Expect(2) = 1e-036
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = -2 / +2
Query: 718 WYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKG 557
WYFLSKTLAE AFAYA +TGLD+V++CPS +GPLLQP VN S + Y+KG
Sbjct: 92 WYFLSKTLAERAAFAYAKETGLDVVSVCPSWCLGPLLQPTVNNSSLTLIDYLKG 253
Score = 82.6 bits (174), Expect(2) = 1e-036
Identities = 33/64 (51%), Positives = 48/64 (75%)
Frame = -2 / +1
Query: 559 GDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYT 380
GD++ V D KN+VDVRDVA AL+L YE +ASGRY+C S + +++I++I+K+ YP +
Sbjct: 316 GDRDTVDDKMKNVVDVRDVAEALVLVYETPEASGRYICRSYPMSMTEILDIIKSFYPNLS 495
Query: 379 YPQK 368
YP K
Sbjct: 496 YPNK 507
>gb|CW181597.1|CW181597 104_596_11163596_148_36653_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11163596, DNA
sequence
Length = 722
Score = 92.3 bits (195), Expect(3) = 5e-035
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = -2 / -1
Query: 718 WYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKG 557
WYFLSKTLAE AFAYA +TGLD+V++CPS +GPLLQP VN S + Y+KG
Sbjct: 365 WYFLSKTLAERAAFAYAKETGLDVVSVCPSWCLGPLLQPTVNNSSLTLIDYLKG 204
Score = 60.6 bits (126), Expect(3) = 5e-035
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = -2 / -3
Query: 559 GDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSS 440
GD++ V D KN+VDVRDVA AL+L YE +ASGRY+C S
Sbjct: 141 GDRDTVDDKMKNVVDVRDVAEALVLVYETPEASGRYICRS 22
Score = 38.2 bits (77), Expect(3) = 5e-035
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -2 / -3
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCR 731
+AC+EA +R + NP+ G E+ WSD ++CR
Sbjct: 660 RACHEANVRRVVVVSSVAAIAVNPNCRNGVVLDEEWWSDEDFCR 529
>gb|BM328785.1|BM328785 PIC1_26_E07.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 610
Score = 122 bits (260), Expect(2) = 3e-032
Identities = 52/127 (40%), Positives = 79/127 (62%)
Frame = -2 / +1
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
+D W+D E +K + WY +SKTLAE A+ +A K L I + P +V+GP+L P+VN S+
Sbjct: 10 DDCWADVELLKKLQLWYSVSKTLAEKAAWDFAEKEELQIAVLNPGMVLGPMLTPSVNASL 189
Query: 583 KVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNIL 404
++ L + G++ + D VDVRDVA +L++ YEN A GR+LC A R+ D+ N +
Sbjct: 190 RLLLQILGGERIDLDDIYMGCVDVRDVAHSLIMLYENPSAQGRHLCMESAERLVDLANKI 369
Query: 403 KTEYPTY 383
YP +
Sbjct: 370 ADLYPEH 390
Score = 38.2 bits (77), Expect(2) = 3e-032
Identities = 12/31 (38%), Positives = 24/31 (77%)
Frame = -2 / +1
Query: 334 TEKLRKLGWTSRPMEDTLRDSIECYRAMGIL 242
++KL KLG P++ T+RD+++C+R+ G++
Sbjct: 448 SKKLIKLGVRFTPLDKTIRDTVDCFRSKGLI 540
>gb|BZ349552.1|BZ349552 hr42b05.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hr42b05 5', DNA sequence
Length = 655
Score = 120 bits (257), Expect(2) = 5e-032
Identities = 49/53 (92%), Positives = 50/53 (94%)
Frame = -2 / -1
Query: 721 EWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYI 563
EWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQP VN SVK+FL YI
Sbjct: 160 EWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPTVNASVKIFLGYI 2
Score = 120 bits (256), Expect(2) = 4e-028
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -1 / -3
Query: 722 GMVFPF*NIGRT*GFCLCSQNWARHCNYLPIIGNWTFVATCSKYKC*SLPQLY 564
GMVFPF*N GRT*GFCLCS+NWARHCNYLPIIG+WTFVAT SK KC*+LP+LY
Sbjct: 161 GMVFPF*NTGRT*GFCLCSKNWARHCNYLPIIGDWTFVATHSKCKC*NLPRLY 3
Score = 119 bits (254), Expect(2) = 9e-031
Identities = 47/50 (94%), Positives = 48/50 (96%)
Frame = +2 / +2
Query: 563 DITEEDFNTCIYCRLQQRSNYQ*WANSYNV*PSFGCISKSLMFCQCFRKE 712
DITEEDFNTCIYC LQQRSN+Q*WANSYNV*PSF CISKSLMFCQCFRKE
Sbjct: 2 DITEEDFNTCIYCGLQQRSNHQ*WANSYNV*PSFCCISKSLMFCQCFRKE 151
Score = 118 bits (253), Expect(2) = 3e-027
Identities = 51/54 (94%), Positives = 52/54 (96%)
Frame = -3 / -2
Query: 723 RNGISFLKHWQNMRLLLMQPKLG*TL*LFAHHW*LDLCCNLQ*IQVLKSSSVIS 562
RNGISFLKHWQNMRLLLMQ KLG*TL*LFAHHW*LDLCCN Q*+QVLKSSSVIS
Sbjct: 162 RNGISFLKHWQNMRLLLMQQKLG*TL*LFAHHW*LDLCCNPQ*MQVLKSSSVIS 1
Score = 107 bits (229), Expect(2) = 5e-026
Identities = 47/54 (87%), Positives = 49/54 (90%)
Frame = +1 / +1
Query: 562 *YN*GRL*HLYLLQVATKVQLPMMGK*LQCLAQFWLHKQKPHVLPMF*KGNTIP 723
*YN GR *HL+LL VATKVQ PMMGK*LQCLAQF LHKQKPHVLP+F*KGNTIP
Sbjct: 1 *YNRGRF*HLHLLWVATKVQSPMMGK*LQCLAQFLLHKQKPHVLPVF*KGNTIP 162
Score = 106 bits (227), Expect = 4e-022
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = +3 / +3
Query: 573 RKTLTLVFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHS 722
RK LTL FT GCNKGPITNDGQIVTMSSPV AA*AKASCSA+VLERKYHS
Sbjct: 12 RKILTLAFTVGCNKGPITNDGQIVTMSSPVFAA*AKASCSASVLERKYHS 161
Score = 40.9 bits (83), Expect(2) = 5e-032
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2 / -1
Query: 763 EDSWSDGEYCRKNEEWYFLS 704
EDSWSD EYCRKNE Y ++
Sbjct: 655 EDSWSDAEYCRKNEVLYIVN 596
Score = 38.2 bits (77), Expect(2) = 9e-031
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1 / +1
Query: 718 IPHFFCNIPHLTSYP 762
IPHFFCN HLTSYP
Sbjct: 610 IPHFFCNTLHLTSYP 654
Score = 33.6 bits (67), Expect(2) = 5e-026
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3 / +3
Query: 714 YHSSFFLQYSPSDQLS 761
Y++SFFLQYS SDQLS
Sbjct: 606 YNTSFFLQYSASDQLS 653
Score = 28.6 bits (56), Expect(2) = 4e-028
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -3 / -2
Query: 762 RIAGQMGNIAEKMR 721
RIAGQM +IAEKMR
Sbjct: 654 RIAGQMQSIAEKMR 613
Score = 26.7 bits (52), Expect(2) = 3e-027
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = -1 / -3
Query: 761 G*LVRWGILQKK*GMVF 711
G*LVR +LQKK*G+++
Sbjct: 653 G*LVRCRVLQKK*GIIY 603
>gb|BE363139.1|BE363139 DG1_9_D02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 453
Score = 104 bits (222), Expect(2) = 3e-029
Identities = 42/89 (47%), Positives = 65/89 (73%)
Frame = -2 / +2
Query: 655 LDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYE 476
LD+VTI P LV GPLLQP VN S++ + ++KG ++V++ ++VDVRD+A ALLL YE
Sbjct: 2 LDVVTINPGLVFGPLLQPTVNASIQFLIYFLKGGPDLVRNKLWHVVDVRDLADALLLLYE 181
Query: 475 NLQASGRYLCSSPAIRVSDIVNILKTEYP 389
+A+GR++C+ I D++++LK+ YP
Sbjct: 182 VPEAAGRHICAPHVISARDLLDLLKSMYP 268
Score = 45.5 bits (93), Expect(2) = 3e-029
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = -2 / +2
Query: 334 TEKLRKLGWTSRPMEDTLRDSIECYRAMGILN 239
++KL+ LGW+ RP+E+T+ D++EC + G L+
Sbjct: 329 SDKLKNLGWSCRPLEETILDTVECCQRAGFLD 424
>gb|CF428323.1|CF428323 PH1_14_C04.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_14_C04_A002 3', mRNA sequence
Length = 654
Score = 109 bits (232), Expect(2) = 2e-028
Identities = 47/112 (41%), Positives = 70/112 (62%)
Frame = -2 / +2
Query: 718 WYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVK 539
WY +SKTLAE A+ +A K L I + P +V+GP+L P+VN S+++ L + G++ +
Sbjct: 8 WYSVSKTLAEKAAWDFAEKEELQIAVLNPGMVLGPMLTPSVNASLRLLLQILGGERIDLD 187
Query: 538 DGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
D VDVRDVA +L++ YEN A GR+LC A R+ D+ N + YP +
Sbjct: 188 DIYMGCVDVRDVAHSLIMLYENPSAQGRHLCMESAERLVDLANKIADLYPEH 343
Score = 38.2 bits (77), Expect(2) = 2e-028
Identities = 12/31 (38%), Positives = 24/31 (77%)
Frame = -2 / +2
Query: 334 TEKLRKLGWTSRPMEDTLRDSIECYRAMGIL 242
++KL KLG P++ T+RD+++C+R+ G++
Sbjct: 401 SKKLIKLGVRFTPLDKTIRDTVDCFRSKGLI 493
>gb|BZ780253.1|BZ780253 ii38c12.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ii38c12, DNA sequence
Length = 565
Score = 97.7 bits (207), Expect(2) = 4e-028
Identities = 38/45 (84%), Positives = 43/45 (95%)
Frame = -2 / -3
Query: 370 KFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
+FVE EGSNTY TEKLRKLGWTSRPME+TLRDS++CYRA+GILN*
Sbjct: 488 RFVEVEGSNTYITEKLRKLGWTSRPMEETLRDSVDCYRALGILN* 354
Score = 90.9 bits (192), Expect(3) = 1e-027
Identities = 42/66 (63%), Positives = 47/66 (71%)
Frame = +3 / +1
Query: 171 EEERNXXXXXXXXXXXQS*REAQFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLL 350
E ++ QS* EAQFR+P A * S LSRRVSS+GLEVHPSFRSFSV+YVLL
Sbjct: 289 EIQKKLKIAAAAAAKAQS*MEAQFRIPKAR*QSTLSRRVSSIGLEVHPSFRSFSVIYVLL 468
Query: 351 PSASTN 368
PS STN
Sbjct: 469 PSTSTN 486
Score = 87.7 bits (185), Expect(2) = 9e-022
Identities = 39/51 (76%), Positives = 44/51 (86%)
Frame = -1 / -2
Query: 371 KIR*SGR*QHIQHGEASEARVDL*AHGGHPPRQHRMLQSYGHPELSFPSAL 219
+IR*SGR*QHI HGEASEARVDL*A+GG+P Q R+L S+G PELSF SAL
Sbjct: 489 QIR*SGR*QHIYHGEASEARVDL*AYGGNPAGQRRLLPSFGDPELSFHSAL 337
Score = 48.7 bits (100), Expect(2) = 4e-028
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = -1 / -1
Query: 149 FRIRWYRN*RSGSWKMLLLKMNLDTI 72
FRI W RN*+ GSW+ML+L+MNL+TI
Sbjct: 259 FRISWCRN*KRGSWEMLMLRMNLNTI 182
Score = 44.1 bits (90), Expect(3) = 1e-027
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +3 / +2
Query: 54 RQAQMMDSIQIHF*QQHLP*STSLVPIPAYSE 149
RQ D +Q+H * QHLP S LVP PAYSE
Sbjct: 164 RQKLRNDGVQVHS*HQHLPRSPFLVPTPAYSE 259
Score = 37.3 bits (75), Expect(2) = 9e-022
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -2 / -2
Query: 151 NSEYAGIGTREVDHGRCCC*K*IWILSIICAC 56
NSE AG+GTR+ D GRC C*+* S + C
Sbjct: 261 NSE*AGVGTRKGDRGRC*C*E*T*TPSFLSFC 166
Score = 27.6 bits (54), Expect(3) = 1e-027
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / +1
Query: 147 EFLIHCLHEE 176
+FLIHCLHEE
Sbjct: 262 KFLIHCLHEE 291
>gb|CW135383.1|CW135383 104_520_11117821_148_34832_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117821, DNA
sequence
Length = 621
Score = 126 bits (269), Expect = 6e-028
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = -2 / -1
Query: 721 EWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQ 551
EWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQP VN SVK+FL YIKG +
Sbjct: 213 EWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPTVNASVKIFLGYIKGGE 43
Score = 124 bits (266), Expect = 2e-027
Identities = 48/55 (87%), Positives = 52/55 (94%)
Frame = -1 / -3
Query: 722 GMVFPF*NIGRT*GFCLCSQNWARHCNYLPIIGNWTFVATCSKYKC*SLPQLYQR 558
GMVFPF*N GRT*GFCLCS+NWARHCNYLPIIG+WTFVAT SK KC*+LP+LYQR
Sbjct: 214 GMVFPF*NTGRT*GFCLCSKNWARHCNYLPIIGDWTFVATHSKCKC*NLPRLYQR 50
Score = 122 bits (261), Expect = 7e-027
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +2 / +1
Query: 557 SFDITEEDFNTCIYCRLQQRSNYQ*WANSYNV*PSFGCISKSLMFCQCFRKE 712
+FDITEEDFNTCIYC LQQRSN+Q*WANSYNV*PSF CISKSLMFCQCFRKE
Sbjct: 49 TFDITEEDFNTCIYCGLQQRSNHQ*WANSYNV*PSFCCISKSLMFCQCFRKE 204
Score = 121 bits (258), Expect = 2e-026
Identities = 52/55 (94%), Positives = 53/55 (96%)
Frame = -3 / -2
Query: 723 RNGISFLKHWQNMRLLLMQPKLG*TL*LFAHHW*LDLCCNLQ*IQVLKSSSVISK 559
RNGISFLKHWQNMRLLLMQ KLG*TL*LFAHHW*LDLCCN Q*+QVLKSSSVISK
Sbjct: 215 RNGISFLKHWQNMRLLLMQQKLG*TL*LFAHHW*LDLCCNPQ*MQVLKSSSVISK 51
Score = 109 bits (233), Expect = 5e-023
Identities = 48/55 (87%), Positives = 50/55 (90%)
Frame = +1 / +3
Query: 559 L*YN*GRL*HLYLLQVATKVQLPMMGK*LQCLAQFWLHKQKPHVLPMF*KGNTIP 723
L*YN GR *HL+LL VATKVQ PMMGK*LQCLAQF LHKQKPHVLP+F*KGNTIP
Sbjct: 51 L*YNRGRF*HLHLLWVATKVQSPMMGK*LQCLAQFLLHKQKPHVLPVF*KGNTIP 215
Score = 106 bits (227), Expect = 4e-022
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = +3 / +2
Query: 573 RKTLTLVFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHS 722
RK LTL FT GCNKGPITNDGQIVTMSSPV AA*AKASCSA+VLERKYHS
Sbjct: 65 RKILTLAFTVGCNKGPITNDGQIVTMSSPVFAA*AKASCSASVLERKYHS 214
>gb|CW339531.1|CW339531 104_840_11485320_148_36140_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485320, DNA
sequence
Length = 625
Score = 126 bits (269), Expect = 6e-028
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = -2 / -2
Query: 721 EWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQ 551
EWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQP VN SVK+FL YIKG +
Sbjct: 225 EWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPTVNASVKIFLGYIKGGE 55
Score = 124 bits (266), Expect = 2e-027
Identities = 48/55 (87%), Positives = 52/55 (94%)
Frame = -1 / -1
Query: 722 GMVFPF*NIGRT*GFCLCSQNWARHCNYLPIIGNWTFVATCSKYKC*SLPQLYQR 558
GMVFPF*N GRT*GFCLCS+NWARHCNYLPIIG+WTFVAT SK KC*+LP+LYQR
Sbjct: 226 GMVFPF*NTGRT*GFCLCSKNWARHCNYLPIIGDWTFVATHSKCKC*NLPRLYQR 62
Score = 122 bits (261), Expect = 7e-027
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +2 / +1
Query: 557 SFDITEEDFNTCIYCRLQQRSNYQ*WANSYNV*PSFGCISKSLMFCQCFRKE 712
+FDITEEDFNTCIYC LQQRSN+Q*WANSYNV*PSF CISKSLMFCQCFRKE
Sbjct: 61 TFDITEEDFNTCIYCGLQQRSNHQ*WANSYNV*PSFCCISKSLMFCQCFRKE 216
Score = 121 bits (258), Expect = 2e-026
Identities = 52/55 (94%), Positives = 53/55 (96%)
Frame = -3 / -3
Query: 723 RNGISFLKHWQNMRLLLMQPKLG*TL*LFAHHW*LDLCCNLQ*IQVLKSSSVISK 559
RNGISFLKHWQNMRLLLMQ KLG*TL*LFAHHW*LDLCCN Q*+QVLKSSSVISK
Sbjct: 227 RNGISFLKHWQNMRLLLMQQKLG*TL*LFAHHW*LDLCCNPQ*MQVLKSSSVISK 63
Score = 109 bits (233), Expect = 5e-023
Identities = 48/55 (87%), Positives = 50/55 (90%)
Frame = +1 / +3
Query: 559 L*YN*GRL*HLYLLQVATKVQLPMMGK*LQCLAQFWLHKQKPHVLPMF*KGNTIP 723
L*YN GR *HL+LL VATKVQ PMMGK*LQCLAQF LHKQKPHVLP+F*KGNTIP
Sbjct: 63 L*YNRGRF*HLHLLWVATKVQSPMMGK*LQCLAQFLLHKQKPHVLPVF*KGNTIP 227
Score = 106 bits (227), Expect = 4e-022
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = +3 / +2
Query: 573 RKTLTLVFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHS 722
RK LTL FT GCNKGPITNDGQIVTMSSPV AA*AKASCSA+VLERKYHS
Sbjct: 77 RKILTLAFTVGCNKGPITNDGQIVTMSSPVFAA*AKASCSASVLERKYHS 226
>gb|BG240109.1|BG240109 OV1_18_A05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 458
Score = 111 bits (238), Expect(2) = 7e-028
Identities = 41/77 (53%), Positives = 53/77 (68%)
Frame = -2 / +3
Query: 784 PKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQ 605
P ED WSD +YCR + WY LSKT+AE EA AY +TG+D+VT+CP V+GPLLQ
Sbjct: 156 PDDAVADEDCWSDEDYCRATKNWYCLSKTVAEREALAYGERTGMDVVTVCPPWVLGPLLQ 335
Query: 604 PAVNTSVKVFLSYIKGD 554
P VN + F+ Y+KG+
Sbjct: 336 PTVNATSMGFVKYLKGE 386
Score = 33.6 bits (67), Expect(2) = 7e-028
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -2 / +3
Query: 529 KNLVDVRDVAGALLLAYE 476
+N+VDVRDVA AL+L YE
Sbjct: 405 RNMVDVRDVADALVLTYE 458
>gb|CN125662.1|CN125662 RHOH1_12_B03.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_12_B03_A002 5', mRNA sequence
Length = 688
Score = 124 bits (266), Expect = 2e-027
Identities = 52/97 (53%), Positives = 61/97 (62%)
Frame = -2 / +3
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KA EAK K V NP WP+ E E WSD E+CR N+ WY LSKTLAE E
Sbjct: 390 KASSEAKVKGVVVVSSVAAVMVNPGWPQDEVMDEACWSDVEFCRTNQNWYCLSKTLAETE 569
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFL 572
AF YA +TGLD+V++CPSLVIGPL Q VN S + +
Sbjct: 570 AFDYAKRTGLDVVSVCPSLVIGPLRQSTVNASSSIIV 680
>gb|CW261808.1|CW261808 104_729_11229713_148_35203_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229713, DNA
sequence
Length = 677
Score = 75.8 bits (159), Expect(3) = 2e-026
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = -2 / +2
Query: 724 EEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKG 557
+ WY ++K ++E A AY +TGLD+VTI P LV GPLLQP VN S++ + ++KG
Sbjct: 53 QSWYPVAKIISEEAALAYGRQTGLDVVTINPGLVFGPLLQPTVNASIQFLIYFLKG 220
Score = 60.6 bits (126), Expect(3) = 2e-026
Identities = 26/62 (41%), Positives = 43/62 (69%)
Frame = -2 / +2
Query: 574 LSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTE 395
LS G ++V++ ++VDVRD+A ALLL YE +A+GR++C+ I D++++LK+
Sbjct: 290 LSADAGGPDLVRNKLWHVVDVRDLADALLLLYEVPEAAGRHICAPHVISARDLLDLLKSM 469
Query: 394 YP 389
YP
Sbjct: 470 YP 475
Score = 25.4 bits (49), Expect(3) = 2e-026
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = -2 / +1
Query: 334 TEKLRKLGWTSRPM 293
++KL+ LGW+ RP+
Sbjct: 634 SDKLKNLGWSCRPL 675
>gb|CF756307.1|CF756307 DSAF1_4_G03.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_4_G03_A011 3', mRNA sequence
Length = 664
Score = 105 bits (223), Expect(2) = 9e-025
Identities = 47/115 (40%), Positives = 69/115 (60%)
Frame = -2 / +3
Query: 718 WYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVK 539
WY +SKTLAE A+ +A + G+D+V + P+ V+G ++ P +N+S+ V L ++G E K
Sbjct: 6 WYPVSKTLAEKAAWKFAEENGVDVVVVNPTSVLGTIIPPTINSSMSVLLRLLQGCTEEYK 185
Query: 538 DGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYP 374
D V V DVA A LL +EN ASGR++C+ +SD L YP+Y P
Sbjct: 186 DIWMGAVHVEDVALAHLLVFENPSASGRHICAESINHLSDFAAKLAELYPSYKVP 350
Score = 29.9 bits (59), Expect(2) = 9e-025
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -2 / +1
Query: 331 EKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
+KL LG RP+E +RD++E ++ G ++*
Sbjct: 424 KKLVALGLQFRPLEKIIRDAVESLKSRGYIS* 519
>gb|CN135147.1|CN135147 OX1_30_G11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_30_G11_A002 5', mRNA sequence
Length = 773
Score = 114 bits (244), Expect = 2e-024
Identities = 45/102 (44%), Positives = 61/102 (59%)
Frame = -2 / +1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
K C K + V +NP+WP+ E WSD E+C++ E+WY ++KTLAE E
Sbjct: 424 KVCSTLKVHKVVVMSSNAAVTSNPNWPQDRLKDESCWSDTEFCKEKEDWYSVAKTLAEQE 603
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKG 557
A YA GL++V +CP V GPLLQ +VNTS K+ + IKG
Sbjct: 604 ASEYARNNGLNVVALCPPYVFGPLLQSSVNTSSKLLIYVIKG 729
>gb|CW442746.1|CW442746 fsbb001f162i18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f162i18, DNA
sequence
Length = 673
Score = 78.5 bits (165), Expect(3) = 8e-023
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = -2 / +1
Query: 724 EEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTS 587
+ WY +SKTLAE EA AY+ +TG+D+VT+CP V+GPLLQP VN +
Sbjct: 181 QNWYCVSKTLAEREALAYSERTGMDVVTVCPPWVLGPLLQPTVNAT 318
Score = 41.8 bits (85), Expect(3) = 8e-023
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -2 / +2
Query: 529 KNLVDVRDVAGALLLAYENLQASGR 455
+N+VDVRDVA AL+L YE +ASGR
Sbjct: 461 RNMVDVRDVADALVLTYETPEASGR 535
Score = 29.0 bits (57), Expect(3) = 8e-023
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 457 RYLCSSPAIRVSDIVNILKTEYP 389
RY+CS+ A++VS+ V ++ + +P
Sbjct: 539 RYICSAHAMKVSETVGLVSSLFP 607
>gb|CW250340.1|CW250340 104_712_11223336_148_35055_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223336, DNA
sequence
Length = 456
Score = 87.2 bits (184), Expect(2) = 1e-022
Identities = 35/59 (59%), Positives = 43/59 (72%)
Frame = -2 / +1
Query: 724 EEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQE 548
+ WY LSKTLAE EAF YA +TGLD+V++CPSLVIGPL Q VN S + + +KG E
Sbjct: 91 QNWYCLSKTLAETEAFDYAKRTGLDVVSVCPSLVIGPLRQSTVNASSSIIVDCLKGRTE 267
Score = 40.5 bits (82), Expect(2) = 1e-022
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = -2 / +3
Query: 529 KNLVDVRDVAGALLLAYENLQASG 458
+N VDVRDVA ALLL YE +ASG
Sbjct: 384 RNFVDVRDVANALLLVYETPEASG 455
>gb|CW100055.1|CW100055 104_467_11003894_116_34391_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11003894, DNA
sequence
Length = 652
Score = 106 bits (226), Expect = 5e-022
Identities = 42/56 (75%), Positives = 48/56 (85%)
Frame = -2 / -1
Query: 724 EEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKG 557
++WYFLSKTLAE AFAYAAKTGLD+VTICPS V GPL+QP VN+S KV L+Y KG
Sbjct: 397 QDWYFLSKTLAERGAFAYAAKTGLDVVTICPSYVFGPLMQPIVNSSSKVILNYFKG 230
>gb|CW181342.1|CW181342 104_596_11163456_116_36654_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11163456, DNA
sequence
Length = 583
Score = 105 bits (224), Expect = 9e-022
Identities = 46/121 (38%), Positives = 67/121 (55%)
Frame = -2 / +1
Query: 724 EEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEI 545
+ WY +KT+AE A+ A K GLD++ + P LV+GPLLQP VN S + Y+ G +
Sbjct: 142 QNWYCYAKTVAEQGAWEVARKRGLDLIVVNPVLVLGPLLQPTVNASTDHVMKYLTGSAKT 321
Query: 544 VKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKF 365
+ + V V+DVA A + YE A GRY+C+ + ++ IL +P Y P K
Sbjct: 322 YVNAAQAYVHVQDVAEAHVRVYEAPYAHGRYICAESTLHRGELCRILAKLFPEYPIPTKC 501
Query: 364 V 362
V
Sbjct: 502 V 504
>gb|CW185694.1|CW185694 104_603_11166185_148_36702_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11166185, DNA
sequence
Length = 566
Score = 105 bits (224), Expect = 9e-022
Identities = 46/121 (38%), Positives = 67/121 (55%)
Frame = -2 / -1
Query: 724 EEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEI 545
+ WY +KT+AE A+ A K GLD++ + P LV+GPLLQP VN S + Y+ G +
Sbjct: 395 QNWYCYAKTVAEQGAWEVARKRGLDLIVVNPVLVLGPLLQPTVNASTDHVMKYLTGSAKT 216
Query: 544 VKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKF 365
+ + V V+DVA A + YE A GRY+C+ + ++ IL +P Y P K
Sbjct: 215 YVNAAQAYVHVQDVAEAHVRVYEAPYAHGRYICAESTLHRGELCRILAKLFPEYPIPTKC 36
Query: 364 V 362
V
Sbjct: 35 V 33
>gb|BE362142.1|BE362142 DG1_84_C11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 698
Score = 97.3 bits (206), Expect(2) = 1e-021
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = -2 / +1
Query: 658 GLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAY 479
G+D+V + P LV+GPLLQP VN S+ L Y+ G + + VDVRDVA A L +
Sbjct: 4 GVDLVVVNPVLVVGPLLQPTVNASIAHVLKYLDGSARTFANAVQAYVDVRDVADAHLRVF 183
Query: 478 ENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
E+ ASGRYLC+ + D+V IL +P Y P +
Sbjct: 184 ESPAASGRYLCAERVLHREDVVRILAKLFPEYPVPTR 294
Score = 27.2 bits (53), Expect(2) = 1e-021
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2 / +1
Query: 340 YNTEKLRKLGWTSRPMEDTLRDSIECYRAMGIL 242
++ +KLR LG RP+ +L D+++ + G L
Sbjct: 334 FSNQKLRDLGLEFRPVSQSLYDTVKNLQEKGHL 432
>gb|CL701845.2|CL701845 SP__Ba0078E02.f SP__Ba Sorghum propinquum genomic clone
SP__Ba0078E02 5', DNA sequence
Length = 479
Score = 102 bits (218), Expect = 6e-021
Identities = 39/62 (62%), Positives = 50/62 (80%)
Frame = -2 / +2
Query: 742 EYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYI 563
+ C ++WY+LSKTL+E EAFAYAAKTGLD+VTICP+LV GPL+Q +N S K+ L+Y
Sbjct: 68 DICFVVQDWYYLSKTLSEREAFAYAAKTGLDVVTICPALVFGPLMQSILNASSKILLNYF 247
Query: 562 KG 557
KG
Sbjct: 248 KG 253
>gb|CW180919.1|CW180919 104_595_11163212_148_36646_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11163212, DNA
sequence
Length = 706
Score = 66.1 bits (138), Expect(3) = 7e-021
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = -2 / +1
Query: 745 GEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSY 566
G C + + WY +SKTLAE A+ +A K L I + P +V+GP+L P+VN S+++ L
Sbjct: 286 GHLCSELQLWYSVSKTLAEKAAWDFAEKEELQIAVLNPGMVLGPMLTPSVNASLRLLLQI 465
Query: 565 IKG 557
+ G
Sbjct: 466 LGG 474
Score = 42.3 bits (86), Expect(3) = 7e-021
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = -2 / +2
Query: 520 VDVRDVAGALLLAYENLQASGRYLCSSPA 434
VDVRDVA +L++ YEN A GR+LC A
Sbjct: 617 VDVRDVAHSLIMLYENPSAQGRHLCMESA 703
Score = 34.5 bits (69), Expect(3) = 7e-021
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2 / +3
Query: 796 NPDWPKGEAFTEDSWSDGEYCRK 728
NP+WP G+ +D W+D E +K
Sbjct: 135 NPNWPPGKVIDDDCWADVELLKK 203
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 968,217,621
Number of Sequences: 832831
Number of extensions: 13243380
Number of successful extensions: 96090
Number of sequences better than 1.0e-020: 35
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 27683587906
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)