TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3204317.2.1
(607 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD222337.1|CD222337 CCC1_21_H03.b1_A007 Callus culture/c... 284 7e-076
gb|AW923660.1|AW923660 DG1_57_B08.g1_A002 Dark Grown 1 (DG1... 214 5e-060
gb|BG356442.1|BG356442 EM1_22_F02.g1_A002 Embryo 1 (EM1) So... 232 5e-060
gb|BE359792.1|BE359792 DG1_57_B08.g2_A002 Dark Grown 1 (DG1... 202 2e-056
gb|BG158722.1|BG158722 RHIZ2_44_D05.g1_A003 Rhizome2 (RHIZ2... 218 5e-056
gb|BG948068.1|BG948068 IP1_9_A05.g1_A002 Immature pannicle ... 215 3e-055
gb|AW922447.1|AW922447 DG1_19_F09.g1_A002 Dark Grown 1 (DG1... 208 6e-053
gb|CF488801.1|CF488801 POL1_52_G01.b1_A002 Pollen Sorghum b... 207 1e-052
gb|BF177056.1|BF177056 EM1_3_A09.g1_A002 Embryo 1 (EM1) Sor... 186 2e-050
gb|BF177065.1|BF177065 EM1_3_B09.g1_A002 Embryo 1 (EM1) Sor... 186 2e-050
gb|CD431007.1|CD431007 ETH1_6_B01.b1_A002 Ethylene-treated ... 186 2e-050
gb|BF704987.1|BF704987 RHIZ2_1_A02.g1_A003 Rhizome2 (RHIZ2)... 199 2e-050
gb|BG412794.1|BG412794 OV2_34_H07.b1_A002 Ovary 2 (OV2) Sor... 196 2e-049
gb|BF481476.1|BF481476 FM1_19_F05.g1_A003 Floral-Induced Me... 195 6e-049
gb|CF483885.1|CF483885 POL1_1_G10.b1_A002 Pollen Sorghum bi... 107 3e-048
gb|CF489056.1|CF489056 POL1_54_D01.b1_A002 Pollen Sorghum b... 106 7e-048
gb|BG239805.1|BG239805 OV1_29_C04.g1_A002 Ovary 1 (OV1) Sor... 191 1e-047
gb|CF480940.1|CF480940 POL1_69_B07.b1_A002 Pollen Sorghum b... 107 2e-047
gb|BI075135.1|BI075135 IP1_19_D09.g1_A002 Immature pannicle... 189 3e-047
gb|BG412484.1|BG412484 OV2_34_H07.g1_A002 Ovary 2 (OV2) Sor... 186 2e-046
gb|BI075107.1|BI075107 IP1_19_F12.g1_A002 Immature pannicle... 186 2e-046
gb|BI074347.1|BI074347 IP1_14_E12.g1_A002 Immature pannicle... 184 1e-045
gb|CF487354.1|CF487354 POL1_43_F12.b1_A002 Pollen Sorghum b... 181 1e-044
gb|BG356885.1|BG356885 OV2_11_C02.g1_A002 Ovary 2 (OV2) Sor... 179 4e-044
gb|BM328758.1|BM328758 PIC1_26_B11.g1_A002 Pathogen-infecte... 163 1e-043
gb|BI075510.1|BI075510 IP1_21_D08.g1_A002 Immature pannicle... 177 1e-043
gb|CW241422.1|CW241422 104_700_11218762_148_37541_037 Sorgh... 129 2e-043
gb|BZ367053.1|BZ367053 id02b04.b1 WGS-SbicolorF (JM107 adap... 129 2e-043
gb|BG355936.2|BG355936 EM1_18_E01.g1_A002 Embryo 1 (EM1) So... 170 2e-041
gb|CF486029.1|CF486029 POL1_35_F05.b1_A002 Pollen Sorghum b... 105 5e-041
gb|CW053212.1|CW053212 104_293_10515837_115_30191 Sorghum m... 102 3e-039
gb|CW053339.1|CW053339 104_293_10515908_115_30191 Sorghum m... 102 2e-038
gb|BG412485.1|BG412485 OV2_34_H08.g1_A002 Ovary 2 (OV2) Sor... 156 2e-037
gb|CW092082.1|CW092082 104_454_10998932_116_33041_074 Sorgh... 108 4e-037
gb|BG412795.1|BG412795 OV2_34_H08.b1_A002 Ovary 2 (OV2) Sor... 155 6e-037
gb|CW422227.1|CW422227 fsbb001f131g13k0 Sorghum methylation... 80 7e-035
gb|CF481153.1|CF481153 POL1_70_G02.b1_A002 Pollen Sorghum b... 105 7e-035
gb|CF485542.1|CF485542 POL1_32_E01.b1_A002 Pollen Sorghum b... 103 1e-034
gb|BF587914.1|BF587914 FM1_34_D09.g1_A003 Floral-Induced Me... 123 8e-034
gb|BG559003.1|BG559003 RHIZ2_53_D04.g1_A003 Rhizome2 (RHIZ2... 138 1e-031
gb|BE125777.1|BE125777 DG1_57_B08.b1_A002 Dark Grown 1 (DG1... 116 8e-031
gb|CN123998.1|CN123998 RHOH1_2_A09.b1_A002 Acid- and alkali... 73 1e-030
gb|CN127628.1|CN127628 RHOH1_24_C12.b1_A002 Acid- and alkal... 73 1e-030
gb|BG049317.1|BG049317 OV1_18_D10.g1_A002 Ovary 1 (OV1) Sor... 73 1e-030
gb|BF481302.1|BF481302 FM1_18_C08.g1_A003 Floral-Induced Me... 134 1e-030
gb|CN144836.1|CN144836 WOUND1_25_F02.b2_A002 Wounded leaves... 93 1e-029
gb|CN129227.1|CN129227 RHOH1_34_E11.b3_A002 Acid- and alkal... 73 2e-029
gb|CD234207.1|CD234207 SS1_26_D01.b1_A012 Salt-stressed see... 127 2e-029
gb|CW476625.1|CW476625 fsbb001f233j03k0 Sorghum methylation... 129 3e-029
gb|CF484384.1|CF484384 POL1_25_B01.b1_A002 Pollen Sorghum b... 101 3e-027
gb|BI097917.1|BI097917 IP1_29_F08.g1_A002 Immature pannicle... 116 2e-025
gb|BG053035.1|BG053035 RHIZ2_16_F06.g1_A003 Rhizome2 (RHIZ2... 63 6e-025
gb|U33817.1|SBU33817 Sorghum bicolor dhurrinase mRNA, nucle... 75 1e-023
gb|CN128121.1|CN128121 RHOH1_27_D08.b1_A002 Acid- and alkal... 75 1e-023
gb|CX614275.1|CX614275 GABR1_13_C10.b1_A002 GA- or brassino... 75 1e-023
gb|BE361473.1|BE361473 DG1_72_G02.g1_A002 Dark Grown 1 (DG1... 75 1e-023
gb|CF433098.1|CF433098 NIT1_25_G09.b1_A002 Nitrogen-deficie... 75 1e-023
gb|BE358119.1|BE358119 DG1_24_H05.g1_A002 Dark Grown 1 (DG1... 75 1e-023
gb|BE358884.1|BE358884 DG1_32_G02.g1_A002 Dark Grown 1 (DG1... 75 1e-023
gb|BE357387.1|BE357387 DG1_15_B06.b2_A002 Dark Grown 1 (DG1... 75 1e-023
gb|BE356746.1|BE356746 DG1_12_B04.g1_A002 Dark Grown 1 (DG1... 75 1e-023
gb|CN151024.1|CN151024 WOUND1_73_B01.b1_A002 Wounded leaves... 76 2e-023
gb|CD232824.1|CD232824 SS1_10_A10.b1_A012 Salt-stressed see... 77 3e-023
gb|AF253508.1|AF253508 Sorghum bicolor cyanogenic beta-gluc... 75 3e-023
gb|BG102626.1|BG102626 RHIZ2_35_C12.g1_A003 Rhizome2 (RHIZ2... 75 4e-023
gb|BG051974.1|BG051974 RHIZ2_7_C12.g1_A003 Rhizome2 (RHIZ2)... 75 4e-023
gb|BF480877.1|BF480877 FM1_14_D08.g1_A003 Floral-Induced Me... 75 4e-023
gb|BG053045.1|BG053045 RHIZ2_16_G09.g1_A003 Rhizome2 (RHIZ2... 75 4e-023
gb|BF481839.1|BF481839 FM1_22_A09.g1_A003 Floral-Induced Me... 75 4e-023
gb|BF587655.1|BF587655 FM1_39_B01.g1_A003 Floral-Induced Me... 75 4e-023
gb|BG051497.1|BG051497 FM1_57_C05.g1_A003 Floral-Induced Me... 75 4e-023
gb|BG101840.1|BG101840 RHIZ2_23_A11.g1_A003 Rhizome2 (RHIZ2... 75 4e-023
gb|BF585521.1|BF585521 FM1_23_E04.g1_A003 Floral-Induced Me... 75 4e-023
gb|BF586331.1|BF586331 FM1_27_E10.g1_A003 Floral-Induced Me... 75 4e-023
gb|BG103531.1|BG103531 RHIZ2_37_F08.g1_A003 Rhizome2 (RHIZ2... 75 4e-023
gb|CN134551.1|CN134551 OX1_27_C03.b1_A002 Oxidatively-stres... 75 5e-023
gb|CN136482.1|CN136482 OX1_43_G11.b1_A002 Oxidatively-stres... 75 5e-023
gb|CN152460.1|CN152460 WOUND1_82_E09.b1_A002 Wounded leaves... 75 5e-023
gb|CN138826.1|CN138826 OX1_14_E07.b1_A002 Oxidatively-stres... 75 5e-023
gb|CN145795.1|CN145795 WOUND1_35_G08.b1_A002 Wounded leaves... 75 5e-023
gb|CN144829.1|CN144829 WOUND1_25_E06.b2_A002 Wounded leaves... 75 5e-023
gb|CN149178.1|CN149178 WOUND1_61_E05.b1_A002 Wounded leaves... 75 5e-023
gb|CN149689.1|CN149689 WOUND1_64_G04.b1_A002 Wounded leaves... 75 5e-023
gb|CX616676.1|CX616676 GABR1_29_F11.b1_A002 GA- or brassino... 75 5e-023
gb|CN146873.1|CN146873 WOUND1_44_H01.b1_A002 Wounded leaves... 75 5e-023
gb|CX614786.1|CX614786 GABR1_16_G01.b1_A002 GA- or brassino... 75 5e-023
gb|CX617521.1|CX617521 GABR1_34_E12.b1_A002 GA- or brassino... 75 5e-023
gb|CN148248.1|CN148248 WOUND1_55_D01.b1_A002 Wounded leaves... 75 5e-023
gb|CN148653.1|CN148653 WOUND1_58_A03.b1_A002 Wounded leaves... 75 5e-023
gb|CN143583.1|CN143583 WOUND1_17_D11.b1_A002 Wounded leaves... 75 5e-023
gb|CX619557.1|CX619557 GABR1_46_F01.b1_A002 GA- or brassino... 75 5e-023
gb|CN147921.1|CN147921 WOUND1_53_C12.b1_A002 Wounded leaves... 75 5e-023
gb|CX621480.1|CX621480 GABR1_58_H03.b1_A002 GA- or brassino... 75 5e-023
gb|CX623153.1|CX623153 GABR1_68_B11.b1_A002 GA- or brassino... 75 5e-023
gb|CF430453.1|CF430453 PH1_28_H07.b1_A002 Phosphorous-defic... 75 5e-023
gb|CX622795.1|CX622795 GABR1_66_B07.b1_A002 GA- or brassino... 75 5e-023
gb|CX613095.1|CX613095 GABR1_6_F02.b1_A002 GA- or brassinol... 75 5e-023
gb|CN148873.1|CN148873 WOUND1_59_G12.b1_A002 Wounded leaves... 75 5e-023
gb|CX615252.1|CX615252 GABR1_19_B10.b1_A002 GA- or brassino... 75 5e-023
gb|CN143427.1|CN143427 WOUND1_16_E08.b1_A002 Wounded leaves... 75 5e-023
gb|CN145174.1|CN145174 WOUND1_27_F04.b2_A002 Wounded leaves... 75 5e-023
gb|CX618715.1|CX618715 GABR1_41_F03.b1_A002 GA- or brassino... 75 5e-023
gb|CN132570.1|CN132570 OX1_7_A08.b1_A002 Oxidatively-stress... 75 5e-023
gb|CN144266.1|CN144266 WOUND1_21_D08.b1_A002 Wounded leaves... 75 5e-023
gb|CD428325.1|CD428325 ETH1_31_E07.b1_A002 Ethylene-treated... 75 5e-023
gb|CN143911.1|CN143911 WOUND1_19_D01.b1_A002 Wounded leaves... 75 5e-023
gb|CX617315.1|CX617315 GABR1_33_B07.b1_A002 GA- or brassino... 75 5e-023
gb|CN148222.1|CN148222 WOUND1_55_A03.b1_A002 Wounded leaves... 75 5e-023
gb|CX615576.1|CX615576 GABR1_21_A06.b1_A002 GA- or brassino... 75 5e-023
gb|CD463431.1|CD463431 ETH1_44_H06.b1_A002 Ethylene-treated... 75 5e-023
gb|CN144419.1|CN144419 WOUND1_22_D03.b1_A002 Wounded leaves... 75 5e-023
gb|CX617692.1|CX617692 GABR1_35_E09.b1_A002 GA- or brassino... 75 5e-023
gb|CD461983.1|CD461983 SA1_36_E11.b1_A002 Salicylic acid-tr... 75 5e-023
gb|CX621929.1|CX621929 GABR1_61_B07.b2_A002 GA- or brassino... 75 5e-023
gb|BE357079.1|BE357079 DG1_146_H03.g1_A002 Dark Grown 1 (DG... 75 5e-023
gb|BE357078.1|BE357078 DG1_146_H04.g1_A002 Dark Grown 1 (DG... 75 5e-023
gb|CF433417.1|CF433417 NIT1_27_A12.b1_A002 Nitrogen-deficie... 75 5e-023
gb|CN132473.1|CN132473 OX1_6_H06.b1_A002 Oxidatively-stress... 75 5e-023
gb|CD428892.1|CD428892 ETH1_1_F07.b1_A002 Ethylene-treated ... 75 5e-023
gb|CN142003.1|CN142003 WOUND1_3_F05.b1_A002 Wounded leaves ... 75 5e-023
gb|CN142009.1|CN142009 WOUND1_3_G01.b1_A002 Wounded leaves ... 75 5e-023
gb|CN152041.1|CN152041 WOUND1_79_H03.b1_A002 Wounded leaves... 75 5e-023
gb|CD426503.1|CD426503 SA1_21_D04.b1_A002 Salicylic acid-tr... 75 5e-023
gb|CD426739.1|CD426739 SA1_25_F08.b1_A002 Salicylic acid-tr... 75 5e-023
gb|AW565734.1|AW565734 LG1_348_H08.g1_A002 Light Grown 1 (L... 75 5e-023
gb|CN132808.1|CN132808 OX1_8_H01.b1_A002 Oxidatively-stress... 75 5e-023
gb|BM318271.1|BM318271 PI1_80_E11.g9_A002 Pathogen induced ... 75 5e-023
gb|CX621634.1|CX621634 GABR1_59_F08.b1_A002 GA- or brassino... 75 5e-023
gb|CX615723.1|CX615723 GABR1_22_F02.b1_A002 GA- or brassino... 73 7e-023
gb|BF586798.1|BF586798 FM1_30_E01.g1_A003 Floral-Induced Me... 75 7e-023
gb|CD203975.1|CD203975 HS1_3_G04.b1_A012 Heat-shocked seedl... 75 7e-023
gb|CX613988.1|CX613988 GABR1_11_H11.b1_A002 GA- or brassino... 75 7e-023
gb|CD204463.1|CD204463 HS1_8_D11.b1_A012 Heat-shocked seedl... 75 9e-023
gb|CD232362.1|CD232362 SS1_45_D11.b1_A012 Salt-stressed see... 75 9e-023
gb|CD213899.1|CD213899 HS1_69_A08.b1_A012 Heat-shocked seed... 75 9e-023
gb|CD213908.1|CD213908 HS1_69_G10.b1_A012 Heat-shocked seed... 75 9e-023
gb|CD210399.1|CD210399 HS1_51_F10.b1_A012 Heat-shocked seed... 75 9e-023
gb|CB924788.1|CB924788 ABA1_28_G05.b1_A012 Abscisic acid-tr... 75 9e-023
gb|CD209345.1|CD209345 HS1_42_D07.b1_A012 Heat-shocked seed... 75 9e-023
gb|CD213451.1|CD213451 HS1_41_D04.b1_A012 Heat-shocked seed... 75 9e-023
gb|CD230588.1|CD230588 SS1_47_A08.b1_A012 Salt-stressed see... 75 9e-023
gb|CB924927.1|CB924927 ABA1_29_G03.b1_A012 Abscisic acid-tr... 75 9e-023
gb|CD210097.1|CD210097 HS1_57_F09.b1_A012 Heat-shocked seed... 75 9e-023
gb|CD211400.1|CD211400 HS1_60_H01.b1_A012 Heat-shocked seed... 75 9e-023
gb|CD206973.1|CD206973 HS1_26_H04.b1_A012 Heat-shocked seed... 75 9e-023
gb|CD208382.1|CD208382 HS1_37_A07.b1_A012 Heat-shocked seed... 75 9e-023
gb|CD230120.1|CD230120 SS1_41_F06.b1_A012 Salt-stressed see... 75 9e-023
gb|CD207069.1|CD207069 HS1_27_D10.b1_A012 Heat-shocked seed... 75 9e-023
gb|CD210870.1|CD210870 HS1_66_F09.b1_A012 Heat-shocked seed... 75 9e-023
gb|CD235414.1|CD235414 SS1_29_H09.b1_A012 Salt-stressed see... 75 9e-023
gb|CD232272.1|CD232272 SS1_39_F07.b1_A012 Salt-stressed see... 75 9e-023
gb|CD213064.1|CD213064 HS1_28_A05.b1_A012 Heat-shocked seed... 75 9e-023
gb|CB924610.1|CB924610 ABA1_1_C01.b1_A012 Abscisic acid-tre... 75 9e-023
gb|CD214077.1|CD214077 HS1_70_E04.b1_A012 Heat-shocked seed... 75 9e-023
gb|CD210149.1|CD210149 HS1_57_D05.b1_A012 Heat-shocked seed... 75 9e-023
gb|CF487437.1|CF487437 POL1_43_F12.g1_A002 Pollen Sorghum b... 107 1e-022
gb|DN552724.1|DN552724 pSHR-RT-MR-H1_E05_S217 pSHR Sorghum ... 75 1e-022
gb|CX614453.1|CX614453 GABR1_14_E02.b1_A002 GA- or brassino... 75 1e-022
gb|DN552712.1|DN552712 pSHR-RT-MR-H1_B06_C383 pSHR Sorghum ... 75 1e-022
gb|DN552528.1|DN552528 pSHR-RT-A-H1_C03_C331 pSHR Sorghum h... 75 1e-022
gb|DN552694.1|DN552694 pSHR-RT-MR-H1_C05_C331 pSHR Sorghum ... 75 1e-022
gb|AI723853.1|AI723853 RHIZ1_28_C08.y1_A001 Rhizome1 (RHIZ1... 75 1e-022
gb|CD213196.1|CD213196 HS1_29_A11.b1_A012 Heat-shocked seed... 75 1e-022
gb|CD424047.1|CD424047 SA1_3_E10.b1_A002 Salicylic acid-tre... 75 1e-022
gb|CN145904.1|CN145904 WOUND1_36_C07.b1_A002 Wounded leaves... 73 2e-022
gb|CN151687.1|CN151687 WOUND1_77_A09.b1_A002 Wounded leaves... 73 2e-022
gb|CX619661.1|CX619661 GABR1_47_B01.b1_A002 GA- or brassino... 73 2e-022
gb|CX615129.1|CX615129 GABR1_18_G09.b1_A002 GA- or brassino... 75 2e-022
gb|CN135186.1|CN135186 OX1_31_D03.b1_A002 Oxidatively-stres... 75 2e-022
gb|BG464390.1|BG464390 EM1_69_B10.g1_A002 Embryo 1 (EM1) So... 75 2e-022
gb|CN145798.1|CN145798 WOUND1_35_G12.b1_A002 Wounded leaves... 72 3e-022
gb|CX615873.1|CX615873 GABR1_24_B10.b1_A002 GA- or brassino... 72 3e-022
gb|CN145514.1|CN145514 WOUND1_33_H12.b1_A002 Wounded leaves... 72 4e-022
gb|CX620964.1|CX620964 GABR1_55_D10.b1_A002 GA- or brassino... 71 6e-022
gb|CW161502.1|CW161502 104_568_11150448_116_36436_090 Sorgh... 105 6e-022
gb|CF488637.1|CF488637 POL1_51_F04.b1_A002 Pollen Sorghum b... 105 6e-022
gb|CW226825.1|CW226825 104_665_11205092_116_37226_080 Sorgh... 64 7e-022
gb|CN148093.1|CN148093 WOUND1_54_D09.b1_A002 Wounded leaves... 72 8e-022
gb|CN145942.1|CN145942 WOUND1_36_H04.b1_A002 Wounded leaves... 75 1e-021
gb|BE596935.1|BE596935 PI1_60_D01.g1_A002 Pathogen induced ... 90 2e-021
gb|CF431284.1|CF431284 NIT1_5_A06.b1_A002 Nitrogen-deficien... 63 2e-021
gb|CN146061.1|CN146061 WOUND1_37_E11.b1_A002 Wounded leaves... 75 2e-021
gb|CN143409.1|CN143409 WOUND1_16_C08.b1_A002 Wounded leaves... 90 5e-021
gb|BE360002.1|BE360002 DG1_60_H01.g2_A002 Dark Grown 1 (DG1... 75 1e-020
gb|BM328168.1|BM328168 PIC1_21_H06.g1_A002 Pathogen-infecte... 86 1e-020
gb|BF422097.1|BF422097 FM1_12_H01.g1_A003 Floral-Induced Me... 75 1e-020
gb|BF587567.1|BF587567 FM1_38_A04.g1_A003 Floral-Induced Me... 75 1e-020
>gb|CD222337.1|CD222337 CCC1_21_H03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_21_H03_A007 3', mRNA sequence
Length = 493
Score = 284 bits (615), Expect = 7e-076
Identities = 112/136 (82%), Positives = 117/136 (86%)
Frame = -2 / +3
Query: 594 FVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQG 415
FVYER+GVPIGPRANSDWLYIVPWGLYKAVTYVKEKYG PTM LSENGMDDPGNVTVAQG
Sbjct: 3 FVYERNGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGTPTMFLSENGMDDPGNVTVAQG 182
Query: 414 XXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLR 235
+LK AIDGGANCVGYFAWSLLDN EWKLGYT+RFGLVYVDF+TLR
Sbjct: 183 VHDATRVAYYRSYITKLKEAIDGGANCVGYFAWSLLDNLEWKLGYTARFGLVYVDFKTLR 362
Query: 234 RYPKSSAYWFRDVIAG 187
RYPKSSAYWFRDVI+G
Sbjct: 363 RYPKSSAYWFRDVISG 410
Score = 262 bits (567), Expect = 3e-069
Identities = 121/139 (87%), Positives = 126/139 (90%)
Frame = +2 / -1
Query: 179 QLLPAMTSLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIA 358
Q+LP MTSLNQYAELLG RRSVLKST*TRPN V PSFHSKLSS DQAK PTQLAPPSIA
Sbjct: 418 QILPEMTSLNQYAELLGYRRSVLKST*TRPNLAV*PSFHSKLSSRDQAK*PTQLAPPSIA 239
Query: 359 AFSSAT*LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM* 538
+FS *LR**ATL AS TPWATVTLPGSS+PFSDR+IVG+PYFSLT*VTALYSPQGTM*
Sbjct: 238 SFSLVM*LR**ATLVASCTPWATVTLPGSSMPFSDRNIVGVPYFSLT*VTALYSPQGTM* 59
Query: 539 SQSEFALGPIGTPSRS*TN 595
SQSEFALGPIGTP RS*TN
Sbjct: 58 SQSEFALGPIGTPLRS*TN 2
Score = 220 bits (475), Expect = 1e-056
Identities = 96/136 (70%), Positives = 112/136 (82%)
Frame = +1 / -3
Query: 187 AGDDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQ 366
AGDDIPEPV ALGV PE E+DV++AEPGRV QLPL+VVEQ PGEV+HAVGAAVDR LQ
Sbjct: 410 AGDDIPEPVC*ALGVPPECLEIDVNQAEPGRVTQLPLQVVEQGPGEVAHAVGAAVDRLLQ 231
Query: 367 LGDVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV 546
LGDVAPVVG+PRRV HALG DVARV+H V +H G A+LLLDV D FV SPR V+P+
Sbjct: 230 LGDVAPVVGNPRRVVHALGDGDVARVIHAVFR*KHCGGAILLLDVSDSFV*SPRDYVKPI 51
Query: 547 *VRPWSNRHTVAFIDE 594
*+ PW++RHTVA I++
Sbjct: 50 *ICPWTDRHTVALINK 3
Score = 184 bits (396), Expect = 1e-045
Identities = 85/137 (62%), Positives = 92/137 (67%)
Frame = -3 / +1
Query: 587 MNATVCRLDQGRTQTGSTSCLGDCTKPSPTSRRSTATPRCSCQRTVWTTRATSRWPRACA 408
M+ATVCR QG+ Q G T LGD TK S TSRRS A P+C +T W TRATS PRAC
Sbjct: 10 MSATVCRSVQGQIQIGFT*SLGDYTKLSLTSRRSMAPPQCFYLKTAWMTRATSPSPRACT 189
Query: 407 TRRGWPTTGATSPS*RRRSTAAPTAWDTSPGRCSTTSSGSWXXXXXXXXXXXXXXXXXXX 228
TRRG PTTGATSPS*RRRSTAAPTAW TSPG CSTT SGSW
Sbjct: 190 TRRGLPTTGATSPS*RRRSTAAPTAWATSPGPCSTTWSGSWVTRPGSAWFTSISRHSGGT 369
Query: 227 PRARRTGSGMSSPAATE 177
PRA+ TGSGMSSPA ++
Sbjct: 370 PRAQHTGSGMSSPAKSD 420
Score = 68.4 bits (143), Expect(2) = 2e-023
Identities = 28/47 (59%), Positives = 36/47 (76%)
Frame = -1 / +2
Query: 589 L*TRRCADWTKGELRLALHRALGTVQSRHLRQGEVRQPHDAPVRERY 449
L* +RCAD +KG+ RLALH LGT+QS HLRQGEV PH+ + +R+
Sbjct: 8 L*AQRCADRSKGKFRLALHSPLGTIQSCHLRQGEVWHPHNVSI*KRH 148
Score = 62.5 bits (130), Expect(2) = 2e-023
Identities = 27/46 (58%), Positives = 30/46 (65%)
Frame = -1 / +2
Query: 316 VVARQLRVEAGVHXXXXXXXXXLQDAPALPQELGVLVQGCHRRQQL 179
V ARQL VEAG+H QD PA+PQEL +LVQGCH RQ L
Sbjct: 281 VPARQLGVEAGLHGQVRPGLRRFQDTPAVPQELSILVQGCHLRQNL 418
>gb|AW923660.1|AW923660 DG1_57_B08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 389
Score = 214 bits (462), Expect(2) = 5e-060
Identities = 84/106 (79%), Positives = 89/106 (83%)
Frame = -2 / +3
Query: 558 RANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXX 379
+ANSDWLYIVPWGLYKAVTYVKEKYGNPTM LSENGMDDPGNVTVAQG
Sbjct: 72 QANSDWLYIVPWGLYKAVTYVKEKYGNPTMFLSENGMDDPGNVTVAQGVHDATRVAYYRN 251
Query: 378 XXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRT 241
+LK AIDGGANCVGYFAWSLLDNFEWK+GYT+RFGLVYVDF+T
Sbjct: 252 YITKLKEAIDGGANCVGYFAWSLLDNFEWKVGYTARFGLVYVDFKT 389
Score = 188 bits (406), Expect(2) = 2e-050
Identities = 89/105 (84%), Positives = 93/105 (88%)
Frame = +2 / -2
Query: 242 VLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASRTPW 421
VLKST*TRPN V P+FHSKLSS DQAK PTQLAPPSIA+FS * R**ATL AS TP
Sbjct: 388 VLKST*TRPNLAV*PTFHSKLSSRDQAK*PTQLAPPSIASFSLVM*FR**ATLVASCTPC 209
Query: 422 ATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFA 556
ATVTLPGSS+PFSDR+IVGLPYFSLT*VTALYSPQGTM*SQSEFA
Sbjct: 208 ATVTLPGSSMPFSDRNIVGLPYFSLT*VTALYSPQGTM*SQSEFA 74
Score = 171 bits (368), Expect(2) = 8e-045
Identities = 74/102 (72%), Positives = 84/102 (82%)
Frame = +1 / -1
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
E+DVD+AEPGRV LPLEVVEQ PGEV+HAVGAAVDR LQLGDV PVVG+PRRV HAL
Sbjct: 383 EIDVDQAEPGRVTHLPLEVVEQGPGEVAHAVGAAVDRLLQLGDVVPVVGNPRRVVHALRD 204
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*V 552
DVARV+H V +H GVA+LLLDV D FV SPRH V+P+*+
Sbjct: 203 GDVARVIHAVFR*KHCGVAILLLDVSDSFV*SPRHYVKPI*I 78
Score = 150 bits (323), Expect = 1e-035
Identities = 67/95 (70%), Positives = 70/95 (73%)
Frame = -3 / +1
Query: 569 RLDQGRTQTGSTSCLGDCTKPSPTSRRSTATPRCSCQRTVWTTRATSRWPRACATRRGWP 390
RL + Q G T CLGD TK S TSRRS ATP+C +T W TRATS RAC TRRG P
Sbjct: 61 RLHCRQIQIGFT*CLGDYTKLSLTSRRSMATPQCFYLKTAWMTRATSPSRRACTTRRGLP 240
Query: 389 TTGATSPS*RRRSTAAPTAWDTSPGRCSTTSSGSW 285
TTG TSPS*RRRSTAAPTAW TSPG CSTTSSG W
Sbjct: 241 TTGTTSPS*RRRSTAAPTAWATSPGPCSTTSSGRW 345
Score = 37.7 bits (76), Expect(2) = 5e-060
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPR 556
W +FVYER+GVPIGPR
Sbjct: 13 WHAEFVYERNGVPIGPR 63
Score = 31.3 bits (62), Expect(2) = 2e-050
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2 / -1
Query: 548 EFALGPIGTPSRS*TN 595
+++LGPIGTP RS*TN
Sbjct: 71 QWSLGPIGTPLRS*TN 24
Score = 29.9 bits (59), Expect(2) = 8e-045
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1 / -3
Query: 550 VRPWSNRHTVAFIDELRGP 606
V PW++RHTVA I++ P
Sbjct: 69 VEPWTDRHTVALINKFSMP 13
>gb|BG356442.1|BG356442 EM1_22_F02.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 356
Score = 232 bits (500), Expect = 5e-060
Identities = 90/114 (78%), Positives = 95/114 (83%)
Frame = -2 / +2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W +FVYER+GVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTM LSENGMDDPGNVT
Sbjct: 14 WHAEFVYERNGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMFLSENGMDDPGNVT 193
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFG 265
VAQG +LK AIDGGANCVGYFAWSLLDNFEWK+GYT+RFG
Sbjct: 194 VAQGVHDATRVAYYRSYITKLKEAIDGGANCVGYFAWSLLDNFEWKVGYTARFG 355
Score = 213 bits (459), Expect = 2e-054
Identities = 96/110 (87%), Positives = 100/110 (90%)
Frame = +2 / -3
Query: 266 PNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASRTPWATVTLPGS 445
PN V P+FHSKLSS DQAKYPTQLAPPSIA+FS *LR**ATL AS TPWATVTLPGS
Sbjct: 354 PNLAV*PTFHSKLSSRDQAKYPTQLAPPSIASFSLVM*LR**ATLVASCTPWATVTLPGS 175
Query: 446 SIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTPSRS*TN 595
S+PFSDR+IVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP RS*TN
Sbjct: 174 SMPFSDRNIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTPLRS*TN 25
Score = 190 bits (409), Expect = 2e-047
Identities = 82/114 (71%), Positives = 93/114 (81%)
Frame = +1 / -2
Query: 265 AEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGHRDVARV 444
AEPGRV LPLEVVEQ PGEVSHAVGAAVDR LQLGDVAPVVG+PRRV HALG DVARV
Sbjct: 355 AEPGRVTHLPLEVVEQGPGEVSHAVGAAVDRLLQLGDVAPVVGNPRRVVHALGDGDVARV 176
Query: 445 VHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVAFIDELRGP 606
+H V +H GVA+LLLDV D FV SPRH V+P+*+ PW++RHTVA I++ P
Sbjct: 175 IHAVFR*KHCGVAILLLDVSDSFV*SPRHYVKPI*ICPWTDRHTVALINKFSMP 14
Score = 179 bits (385), Expect = 4e-044
Identities = 78/107 (72%), Positives = 83/107 (77%)
Frame = -3 / +3
Query: 605 GPLSSSMNATVCRLDQGRTQTGSTSCLGDCTKPSPTSRRSTATPRCSCQRTVWTTRATSR 426
G L+ M+ATVCR QG+ Q G T CLGD TK S TSRRS ATP+C +T W TRATS
Sbjct: 15 GMLNLFMSATVCRSVQGQIQIGFT*CLGDYTKLSLTSRRSMATPQCFYLKTAWMTRATSP 194
Query: 425 WPRACATRRGWPTTGATSPS*RRRSTAAPTAWDTSPGRCSTTSSGSW 285
PRAC TRRG PTTGATSPS*RRRSTAAPTAWDTSPG CSTTSSG W
Sbjct: 195 SPRACTTRRGLPTTGATSPS*RRRSTAAPTAWDTSPGPCSTTSSGRW 335
>gb|BE359792.1|BE359792 DG1_57_B08.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 374
Score = 202 bits (435), Expect(2) = 2e-056
Identities = 80/100 (80%), Positives = 83/100 (83%)
Frame = -2 / +1
Query: 558 RANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXX 379
+ANSDWLYIVPWGLYKAVTYVKEKYGNPTM LSENGMDDPGNVTVAQG
Sbjct: 73 QANSDWLYIVPWGLYKAVTYVKEKYGNPTMFLSENGMDDPGNVTVAQGVHDATRVAYYRN 252
Query: 378 XXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLV 259
+LK AIDGGANCVGYFAWSLLDNFEWKLGYT+RFGLV
Sbjct: 253 YITKLKEAIDGGANCVGYFAWSLLDNFEWKLGYTARFGLV 372
Score = 186 bits (400), Expect(2) = 1e-049
Identities = 86/100 (86%), Positives = 89/100 (89%)
Frame = +2 / -1
Query: 257 *TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASRTPWATVTL 436
*TRPN V PSFHSKLSS DQAK PTQLAPPSIA+FS * R**ATL AS TPWATVTL
Sbjct: 374 *TRPNLAV*PSFHSKLSSRDQAK*PTQLAPPSIASFSLVM*FR**ATLVASCTPWATVTL 195
Query: 437 PGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFA 556
PGSS+PFSDR+IVGLPYFSLT*VTALYSPQGTM*SQSEFA
Sbjct: 194 PGSSMPFSDRNIVGLPYFSLT*VTALYSPQGTM*SQSEFA 75
Score = 169 bits (363), Expect(2) = 4e-044
Identities = 73/98 (74%), Positives = 82/98 (83%)
Frame = +1 / -3
Query: 259 DEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGHRDVA 438
D+AEPGRV QLPLEVVEQ PGEV+HAVGAAVDR LQLGDV PVVG+PRRV HALG DVA
Sbjct: 372 DQAEPGRVTQLPLEVVEQGPGEVAHAVGAAVDRLLQLGDVVPVVGNPRRVVHALGDGDVA 193
Query: 439 RVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*V 552
RV+H V +H GVA+LLLDV D FV SPRH V+P+*+
Sbjct: 192 RVIHAVFR*KHCGVAILLLDVSDSFV*SPRHYVKPI*I 79
Score = 157 bits (337), Expect = 2e-037
Identities = 69/95 (72%), Positives = 72/95 (75%)
Frame = -3 / +2
Query: 569 RLDQGRTQTGSTSCLGDCTKPSPTSRRSTATPRCSCQRTVWTTRATSRWPRACATRRGWP 390
RL + Q G T CLGD TK S TSRRS ATP+C +T W TRATS PRAC TRRG P
Sbjct: 62 RLHCRQIQIGFT*CLGDYTKLSLTSRRSMATPQCFYLKTAWMTRATSPSPRACTTRRGLP 241
Query: 389 TTGATSPS*RRRSTAAPTAWDTSPGRCSTTSSGSW 285
TTG TSPS*RRRSTAAPTAW TSPG CSTTSSGSW
Sbjct: 242 TTGTTSPS*RRRSTAAPTAWATSPGPCSTTSSGSW 346
Score = 37.7 bits (76), Expect(2) = 2e-056
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -2 / +2
Query: 606 WPPKFVYERDGVPIGPR 556
W +FVYER+GVPIGPR
Sbjct: 14 WHAEFVYERNGVPIGPR 64
Score = 31.3 bits (62), Expect(2) = 1e-049
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2 / -3
Query: 548 EFALGPIGTPSRS*TN 595
+++LGPIGTP RS*TN
Sbjct: 72 QWSLGPIGTPLRS*TN 25
Score = 29.9 bits (59), Expect(2) = 4e-044
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1 / -2
Query: 550 VRPWSNRHTVAFIDELRGP 606
V PW++RHTVA I++ P
Sbjct: 70 VEPWTDRHTVALINKFSMP 14
>gb|BG158722.1|BG158722 RHIZ2_44_D05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 540
Score = 218 bits (471), Expect = 5e-056
Identities = 82/132 (62%), Positives = 101/132 (76%)
Frame = -2 / +2
Query: 585 ERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXX 406
ER+ +PIG ANS WLYIVPWG+ KAV YVKE Y NPTM+L+ENGMD PG++++ QG
Sbjct: 2 ERNSIPIGAHANSYWLYIVPWGINKAVNYVKETYENPTMILAENGMDQPGDISITQGVHD 181
Query: 405 XXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYP 226
ELK AID GA +GYFAWSLLDNFEW+LGYTSRFGLVYVD++TL+RYP
Sbjct: 182 TIRIRYYRDYITELKKAIDDGARVIGYFAWSLLDNFEWRLGYTSRFGLVYVDYKTLKRYP 361
Query: 225 KSSAYWFRDVIA 190
K SA+WF+ +++
Sbjct: 362 KDSAFWFKHMLS 397
Score = 138 bits (297), Expect = 5e-032
Identities = 78/128 (60%), Positives = 83/128 (64%)
Frame = +2 / -1
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LNQ AE LG VL ST*T+PNR+VYPS HSKLSS+D AK P LAP SIA FSS *
Sbjct: 384 LNQKAESLGYLFKVL*ST*TKPNREVYPSLHSKLSSSDHAK*PMTLAPSSIAFFSSVM*S 205
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALG 562
** L S TP + PG SIPFS R IVG SLT*+TAL P GTM SQ EFA
Sbjct: 204 L**RILIVSCTP*VILISPGWSIPFSARIIVGFS*VSLT*LTALLIPHGTMYSQ*EFA*A 25
Query: 563 PIGTPSRS 586
PIG RS
Sbjct: 24 PIGMLFRS 1
Score = 113 bits (241), Expect = 3e-024
Identities = 56/126 (44%), Positives = 76/126 (60%)
Frame = +1 / -3
Query: 205 EPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAP 384
EP R LGV + V VD+A+P VP+ PLEVVEQRP +V+ G V LQL V
Sbjct: 382 EPESRVLGVPLQSLVVHVDQAKPRSVPKPPLEVVEQRPCKVTDDSGTIVYCLLQLSYVVS 203
Query: 385 VVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWS 564
VV P V H L + D+ R+VH++ ++H V + LD+ D V SPRH+V+PV V +
Sbjct: 202 VVTDPYCVMHTLSNTDITRLVHSIFSKDHCRVFISFLDIVDSLVDSPRHNVQPVGVCMSA 23
Query: 565 NRHTVA 582
NR+ V+
Sbjct: 22 NRNAVS 5
>gb|BG948068.1|BG948068 IP1_9_A05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 636
Score = 215 bits (465), Expect = 3e-055
Identities = 82/138 (59%), Positives = 102/138 (73%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W ++V+ R+G PIGP+ANS+WLYIVP G+Y V Y+KEKYGNPT+ ++ENGMD PGN+T
Sbjct: 34 WQVQYVFARNGKPIGPKANSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLT 213
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +LK AID GAN GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 214 RDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDF 393
Query: 246 RTLRRYPKSSAYWFRDVI 193
TL R+PK+SAYWFRD++
Sbjct: 394 NTLERHPKASAYWFRDML 447
Score = 153 bits (329), Expect = 2e-036
Identities = 81/131 (61%), Positives = 85/131 (64%)
Frame = +2 / -2
Query: 200 SLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT* 379
SLNQ A+ LG R SVLKST*T PN D YP HSKLS DQAK P AP S+A FS *
Sbjct: 440 SLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SMAFFSWPM* 261
Query: 380 LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFAL 559
L * TL ASR W+ V PG SIPFS VG PYFSL * T Y P GTM*SQ EFA
Sbjct: 260 LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM*SQLEFAF 81
Query: 560 GPIGTPSRS*T 592
GPIG P R+ T
Sbjct: 80 GPIGLPLRAKT 48
Score = 114 bits (243), Expect = 1e-024
Identities = 56/128 (43%), Positives = 79/128 (61%)
Frame = +1 / -1
Query: 199 IPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDV 378
+PEPV R LGV ER EV+VD+A+ GRV PLEVV++RPGEV+ V A + QL +V
Sbjct: 441 VPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPGEVASHVCALIYGFFQLANV 262
Query: 379 APVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRP 558
A V HP +A L V+R++H++L + +LLL+V + R DV+P+ +R
Sbjct: 261 ASVEPHPCGIAQVLVTGQVSRLIHSILGNVDSWIPILLLEVVHTSIHPRRDDVKPIRIRL 82
Query: 559 WSNRHTVA 582
WSN +A
Sbjct: 81 WSNWFAIA 58
>gb|AW922447.1|AW922447 DG1_19_F09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 634
Score = 208 bits (449), Expect = 6e-053
Identities = 80/132 (60%), Positives = 98/132 (74%)
Frame = -2 / +3
Query: 588 YERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXX 409
+ R+G PIGP+ANS+WLYIVP G+Y V Y+KEKYGNPT+ ++ENGMD PGN+T Q
Sbjct: 42 FARNGKPIGPKANSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLR 221
Query: 408 XXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRY 229
+LK AID GAN GYFAWSLLDNFEW GY+S+FG+VYVDF TL R+
Sbjct: 222 DATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERH 401
Query: 228 PKSSAYWFRDVI 193
PK+SAYWFRD++
Sbjct: 402 PKASAYWFRDML 437
Score = 153 bits (328), Expect = 3e-036
Identities = 80/129 (62%), Positives = 84/129 (65%)
Frame = +2 / -1
Query: 200 SLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT* 379
SLNQ A+ LG R SVLKST*T PN D YP HSKLS DQAK P AP S+A FS *
Sbjct: 430 SLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SMAFFSWPM* 251
Query: 380 LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFAL 559
L * TL ASR W+ V PG SIPFS VG PYFSL * T Y P GTM*SQ EFA
Sbjct: 250 LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM*SQLEFAF 71
Query: 560 GPIGTPSRS 586
GPIG P R+
Sbjct: 70 GPIGLPLRA 44
Score = 114 bits (243), Expect = 1e-024
Identities = 56/128 (43%), Positives = 79/128 (61%)
Frame = +1 / -3
Query: 199 IPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDV 378
+PEPV R LGV ER EV+VD+A+ GRV PLEVV++RPGEV+ V A + QL +V
Sbjct: 431 VPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPGEVASHVCALIYGFFQLANV 252
Query: 379 APVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRP 558
A V HP +A L V+R++H++L + +LLL+V + R DV+P+ +R
Sbjct: 251 ASVEPHPCGIAQVLVTGQVSRLIHSILGNVDSWIPILLLEVVHTSIHPRRDDVKPIRIRL 72
Query: 559 WSNRHTVA 582
WSN +A
Sbjct: 71 WSNWFAIA 48
>gb|CF488801.1|CF488801 POL1_52_G01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_52_G01_A002 3', mRNA sequence
Length = 586
Score = 207 bits (446), Expect = 1e-052
Identities = 83/143 (58%), Positives = 95/143 (66%)
Frame = -2 / +2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W K YERDGVPIGPR SDWLY+VPWGLYKA+ + KEK+ NP ML+ ENG+D GN T
Sbjct: 8 WHAKISYERDGVPIGPRGYSDWLYVVPWGLYKALIWTKEKFNNPVMLIGENGIDQSGNET 187
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+ EL+ AI GAN GYF WSLLDNFEW+LGYTSRFG+V+VD
Sbjct: 188 LPHALYDKFRIDYFQKSLQELQYAIRDGANVFGYFVWSLLDNFEWRLGYTSRFGIVHVDR 367
Query: 246 RTLRRYPKSSAYWFRDVIAGSN* 178
T RYPK SA WFR VI +*
Sbjct: 368 STFVRYPKDSARWFRKVIKNED* 436
Score = 68.0 bits (142), Expect(2) = 3e-024
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = +2 / -2
Query: 428 VTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTPSRS 586
V+ P SIPFS S+ GL FS + AL SP GT *SQSE+ LGP+GTPSRS
Sbjct: 186 VSFPDWSIPFSPMSMTGLLNFSFVQMRAL*SPHGTT*SQSEYPLGPMGTPSRS 28
Score = 64.8 bits (135), Expect(2) = 3e-024
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +2 / -2
Query: 194 MTSLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSS 370
+T N AE LG R +VL+ST T PN +V PS HSKLSS D KYP AP +A +SS
Sbjct: 420 ITFRNHRAESLGYRTNVLRSTCTIPNLEV*PSRHSKLSSRDHTKYPKTFAPSRMAYWSS 244
>gb|BF177056.1|BF177056 EM1_3_A09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 636
Score = 186 bits (400), Expect(2) = 2e-050
Identities = 73/122 (59%), Positives = 88/122 (72%)
Frame = -2 / +3
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W ++ ER+G PIGP+ANS+WLYIVP G+Y V Y+K+KYGNPT+ ++ENGMD PGN+T
Sbjct: 57 WQVQYALERNGKPIGPQANSNWLYIVPSGMYGCVNYLKQKYGNPTVFITENGMDQPGNLT 236
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q AELK AID GAN GYFAWSLLDNFEW+ GYTS+FG+VYVDF
Sbjct: 237 REQYLHDTTRVQFYKGYLAELKKAIDDGANVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 416
Query: 246 RT 241
T
Sbjct: 417 ST 422
Score = 128 bits (275), Expect = 6e-029
Identities = 69/115 (60%), Positives = 71/115 (61%)
Frame = +2 / -3
Query: 242 VLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASRTPW 421
VLKST*T PN DV P HSKLS DQAK P LAP S+A FSSA * * TL S
Sbjct: 421 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATLAPSSMAFFSSAR*PL*NCTLVVSCKYC 242
Query: 422 ATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTPSRS 586
+ V PG SIPFS VG PYF * T Y P GTM*SQ EFA GPIG P RS
Sbjct: 241 SRVKFPG*SIPFSVMKTVGFPYFCFR*FTQPYIPDGTM*SQFEFACGPIGLPFRS 77
Score = 104 bits (221), Expect = 2e-021
Identities = 52/115 (45%), Positives = 71/115 (61%)
Frame = +1 / -2
Query: 241 RPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHAL 420
R EVDVD +E GRV LPLEVV++RP EV+ V A +D LQL +VA V HP V L
Sbjct: 422 RAEVDVDNSELGRVT*LPLEVVKERPSEVASHVSAVIDGFLQLSEVAFVELHPCGVVQVL 243
Query: 421 GHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVAF 585
V+R++H+VL E+ +++LLL + + DV+PV*+R WSN + F
Sbjct: 242 LTGQVSRLIHSVLSYENCWISILLLQIVHTTIHPRWDDVKPV*IRLWSNWFAIPF 78
Score = 34.5 bits (69), Expect(2) = 2e-050
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -2 / +3
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK SAYWFRD++
Sbjct: 429 LERHPKDSAYWFRDML 476
>gb|BF177065.1|BF177065 EM1_3_B09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 620
Score = 186 bits (400), Expect(2) = 2e-050
Identities = 73/122 (59%), Positives = 88/122 (72%)
Frame = -2 / +3
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W ++ ER+G PIGP+ANS+WLYIVP G+Y V Y+K+KYGNPT+ ++ENGMD PGN+T
Sbjct: 93 WQVQYALERNGKPIGPQANSNWLYIVPSGMYGCVNYLKQKYGNPTVFITENGMDQPGNLT 272
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q AELK AID GAN GYFAWSLLDNFEW+ GYTS+FG+VYVDF
Sbjct: 273 REQYLHDTTRVQFYKGYLAELKKAIDDGANVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 452
Query: 246 RT 241
T
Sbjct: 453 ST 458
Score = 128 bits (275), Expect = 6e-029
Identities = 69/115 (60%), Positives = 71/115 (61%)
Frame = +2 / -2
Query: 242 VLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASRTPW 421
VLKST*T PN DV P HSKLS DQAK P LAP S+A FSSA * * TL S
Sbjct: 457 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATLAPSSMAFFSSAR*PL*NCTLVVSCKYC 278
Query: 422 ATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTPSRS 586
+ V PG SIPFS VG PYF * T Y P GTM*SQ EFA GPIG P RS
Sbjct: 277 SRVKFPG*SIPFSVMKTVGFPYFCFR*FTQPYIPDGTM*SQFEFACGPIGLPFRS 113
Score = 104 bits (221), Expect = 2e-021
Identities = 52/115 (45%), Positives = 71/115 (61%)
Frame = +1 / -1
Query: 241 RPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHAL 420
R EVDVD +E GRV LPLEVV++RP EV+ V A +D LQL +VA V HP V L
Sbjct: 458 RAEVDVDNSELGRVT*LPLEVVKERPSEVASHVSAVIDGFLQLSEVAFVELHPCGVVQVL 279
Query: 421 GHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVAF 585
V+R++H+VL E+ +++LLL + + DV+PV*+R WSN + F
Sbjct: 278 LTGQVSRLIHSVLSYENCWISILLLQIVHTTIHPRWDDVKPV*IRLWSNWFAIPF 114
Score = 34.5 bits (69), Expect(2) = 2e-050
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -2 / +3
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK SAYWFRD++
Sbjct: 465 LERHPKDSAYWFRDML 512
>gb|CD431007.1|CD431007 ETH1_6_B01.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_B01_A002 3', mRNA sequence
Length = 609
Score = 186 bits (400), Expect(2) = 2e-050
Identities = 73/122 (59%), Positives = 88/122 (72%)
Frame = -2 / +2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W ++ ER+G PIGP+ANS+WLYIVP G+Y V Y+K+KYGNPT+ ++ENGMD PGN+T
Sbjct: 5 WQVQYALERNGKPIGPQANSNWLYIVPSGMYGCVNYLKQKYGNPTVFITENGMDQPGNLT 184
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q AELK AID GAN GYFAWSLLDNFEW+ GYTS+FG+VYVDF
Sbjct: 185 REQYLHDTTRVQFYKGYLAELKKAIDDGANVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 364
Query: 246 RT 241
T
Sbjct: 365 ST 370
Score = 128 bits (275), Expect = 6e-029
Identities = 69/115 (60%), Positives = 71/115 (61%)
Frame = +2 / -1
Query: 242 VLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASRTPW 421
VLKST*T PN DV P HSKLS DQAK P LAP S+A FSSA * * TL S
Sbjct: 369 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATLAPSSMAFFSSAR*PL*NCTLVVSCKYC 190
Query: 422 ATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTPSRS 586
+ V PG SIPFS VG PYF * T Y P GTM*SQ EFA GPIG P RS
Sbjct: 189 SRVKFPG*SIPFSVMKTVGFPYFCFR*FTQPYIPDGTM*SQFEFACGPIGLPFRS 25
Score = 34.5 bits (69), Expect(2) = 2e-050
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -2 / +2
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK SAYWFRD++
Sbjct: 377 LERHPKDSAYWFRDML 424
>gb|BF704987.1|BF704987 RHIZ2_1_A02.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 479
Score = 199 bits (430), Expect = 2e-050
Identities = 77/125 (61%), Positives = 93/125 (74%)
Frame = -2 / +2
Query: 567 IGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXX 388
IGP+ANS+WLYIVP G+Y V Y+KEKYGNPT+ ++ENGMD PGN+T Q
Sbjct: 5 IGPKANSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRF 184
Query: 387 XXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYW 208
+LK AID GAN GYFAWSLLDNFEW GY+S+FG+VYVDF TL R+PK+SAYW
Sbjct: 185 YRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERHPKASAYW 364
Query: 207 FRDVI 193
FRD++
Sbjct: 365 FRDML 379
Score = 138 bits (297), Expect = 5e-032
Identities = 76/123 (61%), Positives = 79/123 (64%)
Frame = +2 / -3
Query: 200 SLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT* 379
SLNQ A+ LG R SVLKST*T PN D YP HSKLS DQAK P AP S+A FS *
Sbjct: 372 SLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SMAFFSWPM* 193
Query: 380 LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFAL 559
L * TL ASR + V PG SIPFS VG PYFSL * T Y P GTM*SQ EFA
Sbjct: 192 LL*NRTLVASRRY*SRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM*SQLEFAF 13
Query: 560 GPI 568
GPI
Sbjct: 12 GPI 4
Score = 112 bits (239), Expect = 5e-024
Identities = 55/123 (44%), Positives = 77/123 (62%)
Frame = +1 / -2
Query: 199 IPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDV 378
+PEPV R LGV ER EV+VD+A+ GRV PLEVV++RPGEV+ V A + QL +V
Sbjct: 373 VPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPGEVASHVCALIYGFFQLANV 194
Query: 379 APVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRP 558
A V HP +A L V+R++H++L + +LLL+V + R DV+P+ +R
Sbjct: 193 ASVEPHPCGIAQVLITGQVSRLIHSILGNVDSWIPILLLEVVHTSIHPRRDDVKPIRIRL 14
Query: 559 WSN 567
WSN
Sbjct: 13 WSN 5
>gb|BG412794.1|BG412794 OV2_34_H07.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 562
Score = 196 bits (423), Expect = 2e-049
Identities = 76/130 (58%), Positives = 94/130 (72%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W ++V+ R+G PIGP+ANS+WLYIVP G+Y V Y+KEKYGNPT+ ++ENGMD PGN+T
Sbjct: 172 WQVQYVFARNGKPIGPKANSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLT 351
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +LK AID GAN GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 352 RDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDF 531
Query: 246 RTLRRYPKSS 217
TL R+PK+S
Sbjct: 532 NTLERHPKAS 561
Score = 144 bits (310), Expect = 8e-034
Identities = 76/125 (60%), Positives = 80/125 (64%)
Frame = +2 / -3
Query: 218 ELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**AT 397
+ LG R SVLKST*T PN D YP HSKLS DQAK P AP S+A FS *L * T
Sbjct: 560 DALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SMAFFSWPM*LL*NRT 381
Query: 398 LAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
L ASR W+ V PG SIPFS VG PYFSL * T Y P GTM*SQ EFA GPIG P
Sbjct: 380 LVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM*SQLEFAFGPIGLP 201
Query: 578 SRS*T 592
R+ T
Sbjct: 200 LRAKT 186
Score = 103 bits (219), Expect = 3e-021
Identities = 52/122 (42%), Positives = 74/122 (60%)
Frame = +1 / -2
Query: 217 RALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGH 396
R LGV ER EV+VD+A+ GRV PLEVV++RPGEV+ V A + QL +VA V H
Sbjct: 561 RRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPGEVASHVCALIYGFFQLANVASVEPH 382
Query: 397 PRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHT 576
P +A L V+R++H++L + +LLL+V + R DV+P+ +R WSN
Sbjct: 381 PCGIAQVLVTGQVSRLIHSILGNVDSWIPILLLEVVHTSIHPRRDDVKPIRIRLWSNWFA 202
Query: 577 VA 582
+A
Sbjct: 201 IA 196
>gb|BF481476.1|BF481476 FM1_19_F05.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 500
Score = 195 bits (420), Expect = 6e-049
Identities = 75/123 (60%), Positives = 91/123 (73%)
Frame = -2 / +2
Query: 561 PRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXX 382
P+ANS+WLYIVP G+Y V Y+KEKYGNPT+ ++ENGMD PGN+T Q
Sbjct: 2 PKANSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYR 181
Query: 381 XXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFR 202
+LK AID GAN GYFAWSLLDNFEW GY+S+FG+VYVDF TL R+PK+SAYWFR
Sbjct: 182 SYIGQLKKAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERHPKASAYWFR 361
Query: 201 DVI 193
D++
Sbjct: 362 DML 370
Score = 133 bits (286), Expect = 2e-030
Identities = 74/121 (61%), Positives = 77/121 (63%)
Frame = +2 / -3
Query: 200 SLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT* 379
SLNQ A+ LG R SVLKST*T PN D YP HSKLS DQAK P AP S+A FS *
Sbjct: 363 SLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SMAFFSWPM* 184
Query: 380 LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFAL 559
L * TL ASR + V PG SIPFS VG PYFSL * T Y P GTM*SQ EFA
Sbjct: 183 LL*NRTLVASRRY*SRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM*SQLEFAF 4
Query: 560 G 562
G
Sbjct: 3 G 1
Score = 107 bits (229), Expect = 1e-022
Identities = 53/121 (43%), Positives = 75/121 (61%)
Frame = +1 / -2
Query: 199 IPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDV 378
+PEPV R LGV ER EV+VD+A+ GRV PLEVV++RPGEV+ V A + QL +V
Sbjct: 364 VPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPGEVASHVCALIYGFFQLANV 185
Query: 379 APVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRP 558
A V HP +A L V+R++H++L + +LLL+V + R DV+P+ +R
Sbjct: 184 ASVEPHPCGIAQVLITGQVSRLIHSILGNVDSWIPILLLEVVHTSIHPRRDDVKPIRIRL 5
Query: 559 W 561
W
Sbjct: 4 W 2
>gb|CF483885.1|CF483885 POL1_1_G10.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_1_G10_A002 3', mRNA sequence
Length = 557
Score = 107 bits (229), Expect(2) = 3e-048
Identities = 39/58 (67%), Positives = 46/58 (79%)
Frame = -2 / +2
Query: 597 KFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTV 424
K YERDGVPIGPR SDWLY+VPWGLYKA+ + KEK+ NP ML+ ENG+D GN T+
Sbjct: 2 KISYERDGVPIGPRGYSDWLYVVPWGLYKALIWTKEKFNNPVMLIGENGIDQSGNETL 175
Score = 105 bits (224), Expect(2) = 3e-048
Identities = 43/64 (67%), Positives = 48/64 (75%)
Frame = -2 / +2
Query: 369 ELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVIA 190
EL+ AI GAN GYF WSLLDNFEW+LGYTSRFG+V+VD T RYPK SA WFR VI
Sbjct: 230 ELQYAIRDGANVFGYFVWSLLDNFEWRLGYTSRFGIVHVDRSTFVRYPKDSARWFRKVIK 409
Query: 189 GSN* 178
+*
Sbjct: 410 NED* 421
Score = 68.0 bits (142), Expect(2) = 3e-024
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = +2 / -3
Query: 428 VTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTPSRS 586
V+ P SIPFS S+ GL FS + AL SP GT *SQSE+ LGP+GTPSRS
Sbjct: 171 VSFPDWSIPFSPMSMTGLLNFSFVQMRAL*SPHGTT*SQSEYPLGPMGTPSRS 13
Score = 64.8 bits (135), Expect(2) = 3e-024
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +2 / -3
Query: 194 MTSLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSS 370
+T N AE LG R +VL+ST T PN +V PS HSKLSS D KYP AP +A +SS
Sbjct: 405 ITFRNHRAESLGYRTNVLRSTCTIPNLEV*PSRHSKLSSRDHTKYPKTFAPSRMAYWSS 229
>gb|CF489056.1|CF489056 POL1_54_D01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_54_D01_A002 3', mRNA sequence
Length = 565
Score = 106 bits (226), Expect(2) = 7e-048
Identities = 38/55 (69%), Positives = 45/55 (81%)
Frame = -2 / +1
Query: 588 YERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTV 424
YERDGVPIGPR SDWLY+VPWGLYKA+ + KEK+ NP ML+ ENG+D GN T+
Sbjct: 10 YERDGVPIGPRGYSDWLYVVPWGLYKALIWTKEKFNNPVMLIGENGIDQSGNETL 174
Score = 105 bits (224), Expect(2) = 7e-048
Identities = 43/64 (67%), Positives = 48/64 (75%)
Frame = -2 / +1
Query: 369 ELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVIA 190
EL+ AI GAN GYF WSLLDNFEW+LGYTSRFG+V+VD T RYPK SA WFR VI
Sbjct: 229 ELQYAIRDGANVFGYFVWSLLDNFEWRLGYTSRFGIVHVDRSTFVRYPKDSARWFRKVIK 408
Query: 189 GSN* 178
+*
Sbjct: 409 NED* 420
Score = 68.0 bits (142), Expect(2) = 3e-024
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = +2 / -3
Query: 428 VTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTPSRS 586
V+ P SIPFS S+ GL FS + AL SP GT *SQSE+ LGP+GTPSRS
Sbjct: 170 VSFPDWSIPFSPMSMTGLLNFSFVQMRAL*SPHGTT*SQSEYPLGPMGTPSRS 12
Score = 64.8 bits (135), Expect(2) = 3e-024
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +2 / -3
Query: 194 MTSLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSS 370
+T N AE LG R +VL+ST T PN +V PS HSKLSS D KYP AP +A +SS
Sbjct: 404 ITFRNHRAESLGYRTNVLRSTCTIPNLEV*PSRHSKLSSRDHTKYPKTFAPSRMAYWSS 228
>gb|BG239805.1|BG239805 OV1_29_C04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 191 bits (411), Expect = 1e-047
Identities = 74/121 (61%), Positives = 89/121 (73%)
Frame = -2 / +3
Query: 555 ANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXX 376
ANS+WLYIVP G+Y V Y+KEKYGNPT+ ++ENGMD PGN+T Q
Sbjct: 3 ANSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYRSY 182
Query: 375 XAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDV 196
+LK AID GAN GYFAWSLLDNFEW GY+S+FG+VYVDF TL R+PK+SAYWFRD+
Sbjct: 183 IGQLKKAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERHPKASAYWFRDM 362
Query: 195 I 193
+
Sbjct: 363 L 365
Score = 138 bits (295), Expect = 1e-031
Identities = 74/119 (62%), Positives = 77/119 (64%)
Frame = +2 / -1
Query: 200 SLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT* 379
SLNQ A+ LG R SVLKST*T PN D YP HSKLS DQAK P AP S+A FS *
Sbjct: 358 SLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SMAFFSWPM* 179
Query: 380 LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFA 556
L * TL ASR W+ V PG SIPFS VG PYFSL * T Y P GTM*SQ EFA
Sbjct: 178 LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM*SQLEFA 2
Score = 104 bits (222), Expect = 1e-021
Identities = 52/119 (43%), Positives = 74/119 (62%)
Frame = +1 / -3
Query: 199 IPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDV 378
+PEPV R LGV ER EV+VD+A+ GRV PLEVV++RPGEV+ V A + QL +V
Sbjct: 359 VPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPGEVASHVCALIYGFFQLANV 180
Query: 379 APVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VR 555
A V HP +A L V+R++H++L + +LLL+V + R DV+P+ +R
Sbjct: 179 ASVEPHPCGIAQVLVTGQVSRLIHSILGNVDSWIPILLLEVVHTSIHPRRDDVKPIRIR 3
>gb|CF480940.1|CF480940 POL1_69_B07.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_69_B07_A002 3', mRNA sequence
Length = 567
Score = 107 bits (229), Expect(2) = 2e-047
Identities = 39/58 (67%), Positives = 46/58 (79%)
Frame = -2 / +2
Query: 597 KFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTV 424
K YERDGVPIGPR SDWLY+VPWGLYKA+ + KEK+ NP ML+ ENG+D GN T+
Sbjct: 2 KISYERDGVPIGPRGYSDWLYVVPWGLYKALIWAKEKFNNPVMLIGENGIDQSGNETL 175
Score = 102 bits (217), Expect(2) = 2e-047
Identities = 42/64 (65%), Positives = 47/64 (73%)
Frame = -2 / +2
Query: 369 ELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVIA 190
EL+ AI AN GYF WSLLDNFEW+LGYTSRFG+V+VD T RYPK SA WFR VI
Sbjct: 230 ELQYAIRDDANVFGYFVWSLLDNFEWRLGYTSRFGIVHVDRSTFVRYPKDSARWFRKVIK 409
Query: 189 GSN* 178
+*
Sbjct: 410 NED* 421
Score = 68.0 bits (142), Expect(2) = 4e-023
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = +2 / -1
Query: 428 VTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTPSRS 586
V+ P SIPFS S+ GL FS + AL SP GT *SQSE+ LGP+GTPSRS
Sbjct: 171 VSFPDWSIPFSPMSMTGLLNFSFAQMRAL*SPHGTT*SQSEYPLGPMGTPSRS 13
Score = 61.1 bits (127), Expect(2) = 4e-023
Identities = 31/59 (52%), Positives = 37/59 (62%)
Frame = +2 / -1
Query: 194 MTSLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSS 370
+T N AE LG R +VL+ST T PN +V PS HSKLSS D KYP A +A +SS
Sbjct: 405 ITFRNHRAESLGYRTNVLRSTCTIPNLEV*PSRHSKLSSRDHTKYPKTFASSRMAYWSS 229
>gb|BI075135.1|BI075135 IP1_19_D09.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 553
Score = 189 bits (407), Expect = 3e-047
Identities = 73/120 (60%), Positives = 88/120 (73%)
Frame = -2 / +1
Query: 552 NSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXXX 373
NS+WLYIVP G+Y V Y+KEKYGNPT+ ++ENGMD PGN+T Q
Sbjct: 1 NSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYRSYI 180
Query: 372 AELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
+LK AID GAN GYFAWSLLDNFEW GY+S+FG+VYVDF TL R+PK+SAYWFRD++
Sbjct: 181 GQLKKAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERHPKASAYWFRDML 360
Score = 133 bits (285), Expect = 2e-030
Identities = 72/117 (61%), Positives = 75/117 (64%)
Frame = +2 / -3
Query: 200 SLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT* 379
SLNQ A+ LG R SVLKST*T PN D YP HSKLS DQAK P AP S+A FS *
Sbjct: 353 SLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SMAFFSWPM* 174
Query: 380 LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSE 550
L * TL ASR W+ V PG SIPFS VG PYFSL * T Y P GTM*SQ E
Sbjct: 173 LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM*SQLE 3
Score = 102 bits (218), Expect = 4e-021
Identities = 51/116 (43%), Positives = 72/116 (62%)
Frame = +1 / -2
Query: 199 IPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDV 378
+PEPV R LGV ER EV+VD+A+ GRV PLEVV++RPGEV+ V A + QL +V
Sbjct: 354 VPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPGEVASHVCALIYGFFQLANV 175
Query: 379 APVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV 546
A V HP +A L V+R++H++L + +LLL+V + R DV+P+
Sbjct: 174 ASVEPHPCGIAQVLVTGQVSRLIHSILGNVDSWIPILLLEVVHTSIHPRRDDVKPI 7
>gb|BG412484.1|BG412484 OV2_34_H07.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 654
Score = 186 bits (401), Expect = 2e-046
Identities = 72/119 (60%), Positives = 87/119 (73%)
Frame = -2 / +2
Query: 549 SDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXXXA 370
S+WLYIVP G+Y V Y+KEKYGNPT+ ++ENGMD PGN+T Q
Sbjct: 2 SNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYRSYIG 181
Query: 369 ELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
+LK AID GAN GYFAWSLLDNFEW GY+S+FG+VYVDF TL R+PK+SAYWFRD++
Sbjct: 182 QLKKAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERHPKASAYWFRDML 358
Score = 133 bits (285), Expect = 2e-030
Identities = 72/117 (61%), Positives = 75/117 (64%)
Frame = +2 / -1
Query: 200 SLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT* 379
SLNQ A+ LG R SVLKST*T PN D YP HSKLS DQAK P AP S+A FS *
Sbjct: 351 SLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SMAFFSWPM* 172
Query: 380 LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSE 550
L * TL ASR W+ V PG SIPFS VG PYFSL * T Y P GTM*SQ E
Sbjct: 171 LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM*SQLE 1
Score = 102 bits (218), Expect = 4e-021
Identities = 51/116 (43%), Positives = 72/116 (62%)
Frame = +1 / -3
Query: 199 IPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDV 378
+PEPV R LGV ER EV+VD+A+ GRV PLEVV++RPGEV+ V A + QL +V
Sbjct: 352 VPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPGEVASHVCALIYGFFQLANV 173
Query: 379 APVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV 546
A V HP +A L V+R++H++L + +LLL+V + R DV+P+
Sbjct: 172 ASVEPHPCGIAQVLVTGQVSRLIHSILGNVDSWIPILLLEVVHTSIHPRRDDVKPI 5
>gb|BI075107.1|BI075107 IP1_19_F12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 592
Score = 186 bits (401), Expect = 2e-046
Identities = 72/119 (60%), Positives = 87/119 (73%)
Frame = -2 / +2
Query: 549 SDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXXXA 370
S+WLYIVP G+Y V Y+KEKYGNPT+ ++ENGMD PGN+T Q
Sbjct: 2 SNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYRSYIG 181
Query: 369 ELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
+LK AID GAN GYFAWSLLDNFEW GY+S+FG+VYVDF TL R+PK+SAYWFRD++
Sbjct: 182 QLKKAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERHPKASAYWFRDML 358
Score = 133 bits (285), Expect = 2e-030
Identities = 72/117 (61%), Positives = 75/117 (64%)
Frame = +2 / -2
Query: 200 SLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT* 379
SLNQ A+ LG R SVLKST*T PN D YP HSKLS DQAK P AP S+A FS *
Sbjct: 351 SLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SMAFFSWPM* 172
Query: 380 LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSE 550
L * TL ASR W+ V PG SIPFS VG PYFSL * T Y P GTM*SQ E
Sbjct: 171 LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM*SQLE 1
Score = 102 bits (218), Expect = 4e-021
Identities = 51/116 (43%), Positives = 72/116 (62%)
Frame = +1 / -1
Query: 199 IPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDV 378
+PEPV R LGV ER EV+VD+A+ GRV PLEVV++RPGEV+ V A + QL +V
Sbjct: 352 VPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPGEVASHVCALIYGFFQLANV 173
Query: 379 APVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV 546
A V HP +A L V+R++H++L + +LLL+V + R DV+P+
Sbjct: 172 ASVEPHPCGIAQVLVTGQVSRLIHSILGNVDSWIPILLLEVVHTSIHPRRDDVKPI 5
>gb|BI074347.1|BI074347 IP1_14_E12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 576
Score = 184 bits (396), Expect = 1e-045
Identities = 71/117 (60%), Positives = 85/117 (72%)
Frame = -2 / +2
Query: 543 WLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXXXAEL 364
WLYIVP G+Y V Y+KEKYGNPT+ ++ENGMD PGN+T Q +L
Sbjct: 2 WLYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQL 181
Query: 363 KAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
K AID GAN GYFAWSLLDNFEW GY+S+FG+VYVDF TL R+PK+SAYWFRD++
Sbjct: 182 KKAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERHPKASAYWFRDML 352
Score = 132 bits (282), Expect = 6e-030
Identities = 71/115 (61%), Positives = 74/115 (64%)
Frame = +2 / -1
Query: 200 SLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT* 379
SLNQ A+ LG R SVLKST*T PN D YP HSKLS DQAK P AP S+A FS *
Sbjct: 345 SLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SMAFFSWPM* 166
Query: 380 LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQ 544
L * TL ASR W+ V PG SIPFS VG PYFSL * T Y P GTM*SQ
Sbjct: 165 LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM*SQ 1
>gb|CF487354.1|CF487354 POL1_43_F12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_F12_A002 3', mRNA sequence
Length = 515
Score = 181 bits (389), Expect = 1e-044
Identities = 73/131 (55%), Positives = 84/131 (64%)
Frame = -2 / +3
Query: 570 PIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXX 391
PIGPR SDWLY+VPWGLYKA + KEK+ NP ML+ ENG+D GN T+
Sbjct: 3 PIGPRGYSDWLYVVPWGLYKAFIWTKEKFNNPVMLIGENGIDQSGNGTLPHALYDKFRID 182
Query: 390 XXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAY 211
EL+ AI GAN GYF WSLLDNFEW+ GY SRFG+V+VD T RYPK SA
Sbjct: 183 YFQKSLQELQYAIRDGANVFGYFVWSLLDNFEWRFGYPSRFGIVHVDRSTFVRYPKDSAR 362
Query: 210 WFRDVIAGSN* 178
WFR VI +*
Sbjct: 363 WFRKVIKNED* 395
>gb|BG356885.1|BG356885 OV2_11_C02.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 545
Score = 179 bits (385), Expect = 4e-044
Identities = 70/116 (60%), Positives = 84/116 (72%)
Frame = -2 / +1
Query: 540 LYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXXXAELK 361
LYIVP G+Y V Y+KEKYGNPT+ ++ENGMD PGN+T Q +LK
Sbjct: 1 LYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLK 180
Query: 360 AAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
AID GAN GYFAWSLLDNFEW GY+S+FG+VYVDF TL R+PK+SAYWFRD++
Sbjct: 181 KAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERHPKASAYWFRDML 348
Score = 127 bits (273), Expect = 1e-028
Identities = 69/113 (61%), Positives = 72/113 (63%)
Frame = +2 / -1
Query: 200 SLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT* 379
SLNQ A+ LG R SVLKST*T PN D YP HSKLS DQAK P AP S+A FS *
Sbjct: 341 SLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SMAFFSWPM* 162
Query: 380 LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM* 538
L * TL ASR W+ V PG SIPFS VG PYFSL * T Y P GTM*
Sbjct: 161 LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM* 3
>gb|BM328758.1|BM328758 PIC1_26_B11.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 538
Score = 163 bits (350), Expect(2) = 1e-043
Identities = 65/106 (61%), Positives = 77/106 (72%)
Frame = -2 / +2
Query: 558 RANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXX 379
+ANS+WLYIVP G+Y V Y+K+KYGNPT+ ++ENGMD PGN+T Q
Sbjct: 2 QANSNWLYIVPSGMYGCVNYLKQKYGNPTVFITENGMDQPGNLTREQYLHDTTRVQFYKG 181
Query: 378 XXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRT 241
AELK AID GAN GYFAWSLLDNFEW+ GYTS+FG+VYVDF T
Sbjct: 182 YLAELKKAIDDGANVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFST 319
Score = 112 bits (240), Expect = 4e-024
Identities = 62/105 (59%), Positives = 64/105 (60%)
Frame = +2 / -2
Query: 242 VLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASRTPW 421
VLKST*T PN DV P HSKLS DQAK P LAP S+A FSSA * * TL S
Sbjct: 318 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATLAPSSMAFFSSAR*PL*NCTLVVSCKYC 139
Query: 422 ATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFA 556
+ V PG SIPFS VG PYF * T Y P GTM*SQ EFA
Sbjct: 138 SRVKFPG*SIPFSVMKTVGFPYFCFR*FTQPYIPDGTM*SQFEFA 4
Score = 34.5 bits (69), Expect(2) = 1e-043
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -2 / +2
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK SAYWFRD++
Sbjct: 326 LERHPKDSAYWFRDML 373
>gb|BI075510.1|BI075510 IP1_21_D08.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 539
Score = 177 bits (381), Expect = 1e-043
Identities = 69/115 (60%), Positives = 83/115 (72%)
Frame = -2 / +2
Query: 537 YIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXXXAELKA 358
YIVP G+Y V Y+KEKYGNPT+ ++ENGMD PGN+T Q +LK
Sbjct: 2 YIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKK 181
Query: 357 AIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
AID GAN GYFAWSLLDNFEW GY+S+FG+VYVDF TL R+PK+SAYWFRD++
Sbjct: 182 AIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERHPKASAYWFRDML 346
Score = 127 bits (273), Expect = 1e-028
Identities = 69/113 (61%), Positives = 72/113 (63%)
Frame = +2 / -3
Query: 200 SLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT* 379
SLNQ A+ LG R SVLKST*T PN D YP HSKLS DQAK P AP S+A FS *
Sbjct: 339 SLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SMAFFSWPM* 160
Query: 380 LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM* 538
L * TL ASR W+ V PG SIPFS VG PYFSL * T Y P GTM*
Sbjct: 159 LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM* 1
>gb|CW241422.1|CW241422 104_700_11218762_148_37541_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218762, DNA
sequence
Length = 644
Score = 129 bits (276), Expect(2) = 2e-043
Identities = 51/87 (58%), Positives = 60/87 (68%)
Frame = -2 / -2
Query: 453 GMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTS 274
GMD PGN+T Q +LK AID GAN GYFAWSLLDNFEW GY+S
Sbjct: 325 GMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLSGYSS 146
Query: 273 RFGLVYVDFRTLRRYPKSSAYWFRDVI 193
+FG+VYVDF TL R+PK+SAYWFRD++
Sbjct: 145 KFGIVYVDFNTLERHPKASAYWFRDML 65
Score = 98.2 bits (208), Expect(2) = 4e-028
Identities = 52/85 (61%), Positives = 55/85 (64%)
Frame = +2 / +3
Query: 200 SLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT* 379
SLNQ A+ LG R SVLKST*T PN D YP HSKLS DQAK P AP S+A FS *
Sbjct: 72 SLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SMAFFSWPM* 251
Query: 380 LR**ATLAASRTPWATVTLPGSSIP 454
L * TL ASR W+ V PG SIP
Sbjct: 252 LL*NRTLVASRRYWSRVKFPG*SIP 326
Score = 67.5 bits (141), Expect(2) = 2e-043
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = -2 / -2
Query: 555 ANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENG 451
ANS+WLYIVP G+Y V Y+KEKYGNPT+ ++ENG
Sbjct: 523 ANSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENG 419
Score = 47.3 bits (97), Expect(2) = 4e-028
Identities = 23/36 (63%), Positives = 24/36 (66%)
Frame = +2 / +3
Query: 449 IPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFA 556
+PFS VG PYFSL * T Y P GTM*SQ EFA
Sbjct: 417 VPFSVM*TVGFPYFSLR*FTHPYIPVGTM*SQLEFA 524
>gb|BZ367053.1|BZ367053 id02b04.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id02b04 5', DNA sequence
Length = 619
Score = 129 bits (276), Expect(2) = 2e-043
Identities = 51/86 (59%), Positives = 59/86 (68%)
Frame = -2 / -3
Query: 453 GMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTS 274
GMD PGN+T Q +LK AID GAN GYFAWSLLDNFEW GY+S
Sbjct: 278 GMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLSGYSS 99
Query: 273 RFGLVYVDFRTLRRYPKSSAYWFRDV 196
+FG+VYVDF TL R+PK+SAYWFRD+
Sbjct: 98 KFGIVYVDFNTLERHPKASAYWFRDI 21
Score = 98.2 bits (208), Expect(2) = 4e-028
Identities = 52/85 (61%), Positives = 55/85 (64%)
Frame = +2 / +1
Query: 200 SLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT* 379
SLNQ A+ LG R SVLKST*T PN D YP HSKLS DQAK P AP S+A FS *
Sbjct: 25 SLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SMAFFSWPM* 204
Query: 380 LR**ATLAASRTPWATVTLPGSSIP 454
L * TL ASR W+ V PG SIP
Sbjct: 205 LL*NRTLVASRRYWSRVKFPG*SIP 279
Score = 67.5 bits (141), Expect(2) = 2e-043
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = -2 / -3
Query: 555 ANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENG 451
ANS+WLYIVP G+Y V Y+KEKYGNPT+ ++ENG
Sbjct: 476 ANSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENG 372
Score = 47.3 bits (97), Expect(2) = 4e-028
Identities = 23/36 (63%), Positives = 24/36 (66%)
Frame = +2 / +1
Query: 449 IPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFA 556
+PFS VG PYFSL * T Y P GTM*SQ EFA
Sbjct: 370 VPFSVM*TVGFPYFSLR*FTHPYIPVGTM*SQLEFA 477
>gb|BG355936.2|BG355936 EM1_18_E01.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 476
Score = 170 bits (365), Expect = 2e-041
Identities = 65/111 (58%), Positives = 82/111 (73%)
Frame = -2 / +3
Query: 522 GLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGG 343
G+ KAV YVKE Y N TM+L+ENGMD PG++++ QG ELK AI G
Sbjct: 3 GINKAVNYVKETYENRTMILAENGMDQPGDISITQGVHDTIRIRYYRDYITELKKAIADG 182
Query: 342 ANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVIA 190
A +GYFAWSLLDNFEW+LGYTSRFGLVYVD++TL+RYPK SA+WF+ +++
Sbjct: 183 ARVIGYFAWSLLDNFEWRLGYTSRFGLVYVDYKTLKRYPKDSAFWFKHMLS 335
Score = 111 bits (238), Expect = 7e-024
Identities = 63/107 (58%), Positives = 69/107 (64%)
Frame = +2 / -2
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LNQ AE LG VL ST*T+PNR+VYPS HSKLSS+D AK P LAP +IA FSS *
Sbjct: 322 LNQKAESLGYLFKVL*ST*TKPNREVYPSLHSKLSSSDHAK*PMTLAPSAIAFFSSVM*S 143
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSP 523
** L S TP + PG SIPFS R IV SLT*+TAL P
Sbjct: 142 L**RILIVSCTP*VILISPGWSIPFSARIIVRFS*VSLT*LTALLIP 2
>gb|CF486029.1|CF486029 POL1_35_F05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_F05_A002 3', mRNA sequence
Length = 526
Score = 105 bits (224), Expect(2) = 5e-041
Identities = 43/64 (67%), Positives = 48/64 (75%)
Frame = -2 / +1
Query: 369 ELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVIA 190
EL+ AI GAN GYF WSLLDNFEW+LGYTSRFG+V+VD T RYPK SA WFR VI
Sbjct: 193 ELQYAIRDGANVFGYFVWSLLDNFEWRLGYTSRFGIVHVDRSTFVRYPKDSARWFRKVIK 372
Query: 189 GSN* 178
+*
Sbjct: 373 NED* 384
Score = 83.5 bits (176), Expect(2) = 5e-041
Identities = 29/46 (63%), Positives = 36/46 (78%)
Frame = -2 / +1
Query: 561 PRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTV 424
PR SDWLY+VPWGLYKA+ + KEK+ NP ML+ ENG+D GN T+
Sbjct: 1 PRGYSDWLYVVPWGLYKALIWTKEKFNNPVMLIGENGIDQSGNETL 138
>gb|CW053212.1|CW053212 104_293_10515837_115_30191 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515837, DNA
sequence
Length = 585
Score = 102 bits (217), Expect(3) = 3e-039
Identities = 43/71 (60%), Positives = 47/71 (66%)
Frame = -2 / -2
Query: 453 GMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTS 274
GMD PGN+T Q AELK AID GAN GYFAWSLLDNFEW+ GYTS
Sbjct: 386 GMDQPGNLTREQYLHDTTRVQFYKGYLAELKKAIDDGANVAGYFAWSLLDNFEWQSGYTS 207
Query: 273 RFGLVYVDFRT 241
+FG+VYVDF T
Sbjct: 206 KFGIVYVDFST 174
Score = 64.3 bits (134), Expect(3) = 3e-039
Identities = 22/34 (64%), Positives = 29/34 (85%)
Frame = -2 / -2
Query: 552 NSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENG 451
NS+WLYIVP G+Y V Y+K+KYGNPT+ ++ENG
Sbjct: 584 NSNWLYIVPSGMYGCVNYLKQKYGNPTVFITENG 483
Score = 34.5 bits (69), Expect(3) = 3e-039
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -2 / -2
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK SAYWFRD++
Sbjct: 167 LERHPKDSAYWFRDML 120
>gb|CW053339.1|CW053339 104_293_10515908_115_30191 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515908, DNA
sequence
Length = 582
Score = 102 bits (217), Expect(3) = 2e-038
Identities = 43/71 (60%), Positives = 47/71 (66%)
Frame = -2 / -2
Query: 453 GMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTS 274
GMD PGN+T Q AELK AID GAN GYFAWSLLDNFEW+ GYTS
Sbjct: 386 GMDQPGNLTREQYLHDTTRVQFYKGYLAELKKAIDDGANVAGYFAWSLLDNFEWQSGYTS 207
Query: 273 RFGLVYVDFRT 241
+FG+VYVDF T
Sbjct: 206 KFGIVYVDFST 174
Score = 61.6 bits (128), Expect(3) = 2e-038
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = -2 / -2
Query: 549 SDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENG 451
S+WLYIVP G+Y V Y+K+KYGNPT+ ++ENG
Sbjct: 581 SNWLYIVPSGMYGCVNYLKQKYGNPTVFITENG 483
Score = 34.5 bits (69), Expect(3) = 2e-038
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -2 / -2
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK SAYWFRD++
Sbjct: 167 LERHPKDSAYWFRDML 120
>gb|BG412485.1|BG412485 OV2_34_H08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 345
Score = 156 bits (336), Expect = 2e-037
Identities = 62/108 (57%), Positives = 75/108 (69%)
Frame = -2 / +2
Query: 516 YKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGGAN 337
Y V Y+KEKYGNPT+ ++ENGMD PGN+T Q +LK AID GAN
Sbjct: 2 YGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGAN 181
Query: 336 CVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
GYF WSLLDNFE GY+S+FG+VYVDF TL R+PK+SAYWFRD++
Sbjct: 182 VAGYFVWSLLDNFECLSGYSSKFGIVYVDFNTLERHPKASAYWFRDML 325
Score = 121 bits (259), Expect = 9e-027
Identities = 64/106 (60%), Positives = 67/106 (63%)
Frame = +2 / -1
Query: 200 SLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT* 379
SLNQYA+ LG R SVLKST*T PN D YP HSKLS DQ K P AP S+A FS *
Sbjct: 318 SLNQYADALGCRSSVLKST*TMPNLDEYPDRHSKLSRRDQTK*PATFAP*SMAFFSWPM* 139
Query: 380 LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALY 517
L * TL ASR W+ V PG SIPFS VG PYFSL * T Y
Sbjct: 138 LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPY 1
>gb|CW092082.1|CW092082 104_454_10998932_116_33041_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10998932, DNA
sequence
Length = 670
Score = 108 bits (230), Expect(2) = 4e-037
Identities = 44/78 (56%), Positives = 51/78 (65%)
Frame = -2 / +1
Query: 453 GMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTS 274
GMD PGN+T Q +LK AID GAN GYFAWSLLDNFEW GY+S
Sbjct: 436 GMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLSGYSS 615
Query: 273 RFGLVYVDFRTLRRYPKS 220
+FG+VYVDF TL R+PK+
Sbjct: 616 KFGIVYVDFHTLERHPKA 669
Score = 85.4 bits (180), Expect(2) = 3e-024
Identities = 46/77 (59%), Positives = 48/77 (62%)
Frame = +2 / -3
Query: 224 LG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLA 403
LG R SV KST*T PN D YP HSKLS DQAK P AP S+A FS *L * TL
Sbjct: 665 LGCRSSV*KST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SMAFFSWPM*LL*NRTLV 486
Query: 404 ASRTPWATVTLPGSSIP 454
ASR W+ V PG SIP
Sbjct: 485 ASRRYWSRVKFPG*SIP 435
Score = 67.5 bits (141), Expect(2) = 4e-037
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = -2 / +1
Query: 555 ANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENG 451
ANS+WLYIVP G+Y V Y+KEKYGNPT+ ++ENG
Sbjct: 238 ANSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENG 342
Score = 47.3 bits (97), Expect(2) = 3e-024
Identities = 23/36 (63%), Positives = 24/36 (66%)
Frame = +2 / -3
Query: 449 IPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFA 556
+PFS VG PYFSL * T Y P GTM*SQ EFA
Sbjct: 344 VPFSVM*TVGFPYFSLR*FTHPYIPVGTM*SQLEFA 237
>gb|BG412795.1|BG412795 OV2_34_H08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 492
Score = 155 bits (333), Expect = 6e-037
Identities = 60/105 (57%), Positives = 73/105 (69%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W ++V+ R+G PIGP+ANS+WLYIVP G+Y V Y+KEKYGNPT+ ++ENGMD PGN+T
Sbjct: 172 WQVQYVFARNGKPIGPKANSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLT 351
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEW 292
Q +LK AID GAN GYFAWSLLDNFEW
Sbjct: 352 RDQYLRDATRVRFYRSYIGQLKKAIDHGANVAGYFAWSLLDNFEW 486
Score = 113 bits (241), Expect = 3e-024
Identities = 60/100 (60%), Positives = 63/100 (63%)
Frame = +2 / -2
Query: 293 HSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASRTPWATVTLPGSSIPFSDRSI 472
HSKLS DQAK P AP S+A FS *L * TL ASR W+ V PG SIPFS
Sbjct: 485 HSKLSRRDQAK*PATFAP*SMAFFSWPM*LL*NRTLVASRRYWSRVKFPG*SIPFSVM*T 306
Query: 473 VGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTPSRS*T 592
VG PYFSL * T Y P GTM*SQ EFA GPIG P R+ T
Sbjct: 305 VGFPYFSLR*FTHPYIPVGTM*SQLEFAFGPIGLPLRAKT 186
>gb|CW422227.1|CW422227 fsbb001f131g13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f131g13, DNA
sequence
Length = 720
Score = 80.3 bits (169), Expect(3) = 7e-035
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +2 / +1
Query: 446 SIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFA 556
++PFSDR+IVGLPYFSLT*VTALYSPQGTM*SQSEFA
Sbjct: 211 ALPFSDRNIVGLPYFSLT*VTALYSPQGTM*SQSEFA 321
Score = 80.3 bits (169), Expect(3) = 7e-035
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = +1 / +1
Query: 331 HAVGAAVDRRLQLGDVAPVVGHPRRVAHALGHRDVARVVH 450
HAVG+AVDR LQLGDVAPVVG+PRRV HALG DVARV+H
Sbjct: 1 HAVGSAVDRLLQLGDVAPVVGNPRRVVHALGDGDVARVIH 120
Score = 75.8 bits (159), Expect(3) = 2e-025
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2 / +2
Query: 332 TQLAPPSIAAFSSAT*LR**ATLAASRTPWATVTLPGSSIPFSD 463
TQLAPPSIA+FS *LR**ATL AS TPWATVTLPGSS+P D
Sbjct: 2 TQLAPPSIASFSLVM*LR**ATLVASCTPWATVTLPGSSMPVVD 133
Score = 54.7 bits (113), Expect(3) = 2e-025
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +3 / +2
Query: 474 WGCRTSP*RR*RLCTVPKARCRASLSSPLVQ 566
WGC TSP*R+*+LC VPKA C+A+L+ P V+
Sbjct: 239 WGCHTSP*RK*QLCIVPKALCKANLNLPAVE 331
Score = 25.8 bits (50), Expect(3) = 7e-035
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 556 PWSNRHTVAFI 588
PW++RHTVA I
Sbjct: 404 PWTDRHTVALI 436
Score = 24.0 bits (46), Expect(3) = 2e-025
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 557 LGPIGTPSRS 586
LGPIGTP RS
Sbjct: 405 LGPIGTPLRS 434
>gb|CF481153.1|CF481153 POL1_70_G02.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_70_G02_A002 3', mRNA sequence
Length = 444
Score = 105 bits (224), Expect(2) = 7e-035
Identities = 43/64 (67%), Positives = 48/64 (75%)
Frame = -2 / +1
Query: 369 ELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVIA 190
EL+ AI GAN GYF WSLLDNFEW+LGYTSRFG+V+VD T RYPK SA WFR VI
Sbjct: 163 ELQYAIRDGANVFGYFVWSLLDNFEWRLGYTSRFGIVHVDRSTFVRYPKDSARWFRKVIK 342
Query: 189 GSN* 178
+*
Sbjct: 343 NED* 354
Score = 62.9 bits (131), Expect(2) = 7e-035
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = -2 / +1
Query: 531 VPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTV 424
VPWGLYKA+ + KEK+ NP ML+ ENG+D GN T+
Sbjct: 1 VPWGLYKALIWTKEKFNNPVMLIGENGIDQSGNETL 108
>gb|CF485542.1|CF485542 POL1_32_E01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_32_E01_A002 3', mRNA sequence
Length = 466
Score = 103 bits (219), Expect(2) = 1e-034
Identities = 42/64 (65%), Positives = 48/64 (75%)
Frame = -2 / +2
Query: 369 ELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVIA 190
EL+ AI GA+ GYF WSLLDNFEW+LGYTSRFG+V+VD T RYPK SA WFR VI
Sbjct: 167 ELQYAIRDGASVFGYFVWSLLDNFEWRLGYTSRFGIVHVDRSTFVRYPKDSARWFRKVIK 346
Query: 189 GSN* 178
+*
Sbjct: 347 NED* 358
Score = 64.3 bits (134), Expect(2) = 1e-034
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = -2 / +2
Query: 534 IVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTV 424
+VPWGLYKA+ + KEK+ NP ML+ ENG+D GN T+
Sbjct: 2 VVPWGLYKALIWTKEKFNNPVMLIGENGIDQSGNETL 112
>gb|BF587914.1|BF587914 FM1_34_D09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 584
Score = 123 bits (263), Expect(2) = 8e-034
Identities = 48/72 (66%), Positives = 56/72 (77%)
Frame = -2 / +3
Query: 369 ELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVIA 190
ELK ID GAN VGYFAWSLLDNFEW GYTS+FG+VYVDF TL+RYPK SA WFRD+++
Sbjct: 126 ELKKGIDDGANVVGYFAWSLLDNFEWLSGYTSKFGIVYVDFTTLKRYPKDSACWFRDMLS 305
Query: 189 GSN*DHVRWPQS 154
G+ PQ+
Sbjct: 306 GTGSKAAAAPQT 341
Score = 41.4 bits (84), Expect(2) = 8e-034
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = -2 / +3
Query: 492 EKYGNPTMLLSENGMDDPGNVT 427
EKY NPT+++SENGMD P ++T
Sbjct: 3 EKYQNPTIIISENGMDQPADLT 68
>gb|BG559003.1|BG559003 RHIZ2_53_D04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 427
Score = 138 bits (295), Expect = 1e-031
Identities = 54/94 (57%), Positives = 66/94 (70%)
Frame = -2 / +3
Query: 474 TMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFE 295
T+ ++ENGMD PGN+T Q +LK AID GAN GYFAWSLLDNFE
Sbjct: 3 TVYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFE 182
Query: 294 WKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
W GY+S+FG+VYVDF TL R+PK+SAYWFRD++
Sbjct: 183 WLSGYSSKFGIVYVDFNTLERHPKASAYWFRDML 284
>gb|BE125777.1|BE125777 DG1_57_B08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 535
Score = 116 bits (249), Expect(2) = 8e-031
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = -2 / +3
Query: 558 RANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQ 418
+ANSDWLYIVPWGLYKAVTYVKEKYGNPTM LSENGMDDPGNVTVAQ
Sbjct: 393 QANSDWLYIVPWGLYKAVTYVKEKYGNPTMFLSENGMDDPGNVTVAQ 533
Score = 107 bits (228), Expect(2) = 5e-026
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +2 / -1
Query: 416 PWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFA 556
PWATVTLPGSS+PFSDR+IVGLPYFSLT*VTALYSPQGTM*SQSEFA
Sbjct: 535 PWATVTLPGSSMPFSDRNIVGLPYFSLT*VTALYSPQGTM*SQSEFA 395
Score = 37.7 bits (76), Expect(2) = 8e-031
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPR 556
W +FVYER+GVPIGPR
Sbjct: 334 WHAEFVYERNGVPIGPR 384
Score = 31.3 bits (62), Expect(2) = 5e-026
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2 / -3
Query: 548 EFALGPIGTPSRS*TN 595
+++LGPIGTP RS*TN
Sbjct: 392 QWSLGPIGTPLRS*TN 345
>gb|CN123998.1|CN123998 RHOH1_2_A09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_2_A09_A002 3', mRNA sequence
Length = 799
Score = 73.5 bits (154), Expect(3) = 1e-030
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = -2 / +3
Query: 576 GVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDD 442
G IG RA S+WL+IVPWGL K + Y+ +KY NP + ++ENGMDD
Sbjct: 21 GEKIGERAASEWLFIVPWGLRKVLNYIVKKYNNPVIYITENGMDD 155
Score = 73.0 bits (153), Expect(3) = 1e-030
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = -2 / +3
Query: 357 AIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
AI GA+ GYFAWS LDNFEW +GYT RFG+VYVD++
Sbjct: 246 AIKDGADIRGYFAWSFLDNFEWAMGYTKRFGIVYVDYK 359
Score = 25.8 bits (50), Expect(3) = 1e-030
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2 / +3
Query: 240 LRRYPKSSAYWFRDVIAG 187
L R+PK+SA WF + G
Sbjct: 366 LSRHPKASALWFSRFLKG 419
>gb|CN127628.1|CN127628 RHOH1_24_C12.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_24_C12_A002 3', mRNA sequence
Length = 731
Score = 73.5 bits (154), Expect(3) = 1e-030
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = -2 / +2
Query: 576 GVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDD 442
G IG RA S+WL+IVPWGL K + Y+ +KY NP + ++ENGMDD
Sbjct: 68 GEKIGERAASEWLFIVPWGLRKVLNYIVKKYNNPVIYITENGMDD 202
Score = 73.0 bits (153), Expect(3) = 1e-030
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = -2 / +2
Query: 357 AIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
AI GA+ GYFAWS LDNFEW +GYT RFG+VYVD++
Sbjct: 293 AIKDGADIRGYFAWSFLDNFEWAMGYTKRFGIVYVDYK 406
Score = 25.8 bits (50), Expect(3) = 1e-030
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2 / +2
Query: 240 LRRYPKSSAYWFRDVIAG 187
L R+PK+SA WF + G
Sbjct: 413 LSRHPKASALWFSRFLKG 466
>gb|BG049317.1|BG049317 OV1_18_D10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 684
Score = 73.5 bits (154), Expect(3) = 1e-030
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = -2 / +3
Query: 576 GVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDD 442
G IG RA S+WL+IVPWGL K + Y+ +KY NP + ++ENGMDD
Sbjct: 33 GEKIGERAASEWLFIVPWGLRKVLNYIVKKYNNPVIYITENGMDD 167
Score = 73.0 bits (153), Expect(3) = 1e-030
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = -2 / +3
Query: 357 AIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
AI GA+ GYFAWS LDNFEW +GYT RFG+VYVD++
Sbjct: 258 AIKDGADIRGYFAWSFLDNFEWAMGYTKRFGIVYVDYK 371
Score = 25.8 bits (50), Expect(3) = 1e-030
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2 / +3
Query: 240 LRRYPKSSAYWFRDVIAG 187
L R+PK+SA WF + G
Sbjct: 378 LSRHPKASALWFSRFLKG 431
>gb|BF481302.1|BF481302 FM1_18_C08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 442
Score = 134 bits (287), Expect = 1e-030
Identities = 53/89 (59%), Positives = 62/89 (69%)
Frame = -2 / +3
Query: 459 ENGMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGY 280
ENGMD PGN+T Q +LK AID GAN GYFAWSLLDNFEW GY
Sbjct: 3 ENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLSGY 182
Query: 279 TSRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
+S+FG+VYVDF TL R+PK+SAYWFRD++
Sbjct: 183 SSKFGIVYVDFNTLERHPKASAYWFRDML 269
>gb|CN144836.1|CN144836 WOUND1_25_F02.b2_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_25_F02_A002 3', mRNA sequence
Length = 728
Score = 92.7 bits (196), Expect(2) = 1e-029
Identities = 36/61 (59%), Positives = 44/61 (72%)
Frame = -2 / +1
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVIAG 187
L +AI GA+ GYF WSLLDNFEW GYT RFGL +VDF+T +R PK SA W+ + + G
Sbjct: 412 LASAIRKGADVRGYFVWSLLDNFEWNSGYTQRFGLYHVDFKTQKRTPKLSAKWYSEFLKG 591
Query: 186 S 184
S
Sbjct: 592 S 594
Score = 57.9 bits (120), Expect(2) = 1e-029
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = -2 / +1
Query: 585 ERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGN 433
+RDG+ IG R S +L +VP+G+ K V Y K +Y N M ++ENG N
Sbjct: 187 DRDGILIGERTGSPYLNVVPYGMEKVVMYFKRRYNNTPMYITENGYAQASN 339
>gb|CN129227.1|CN129227 RHOH1_34_E11.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_E11_A002 3', mRNA sequence
Length = 809
Score = 73.5 bits (154), Expect(3) = 2e-029
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = -2 / +2
Query: 576 GVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDD 442
G IG RA S+WL+IVPWGL K + Y+ +KY NP + ++ENGMDD
Sbjct: 32 GEKIGERAASEWLFIVPWGLRKVLNYIVKKYNNPVIYITENGMDD 166
Score = 68.9 bits (144), Expect(3) = 2e-029
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = -2 / +2
Query: 357 AIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
AI GA+ GYFAWS LDNFEW +G T RFG+VYVD++
Sbjct: 257 AIKDGADIRGYFAWSFLDNFEWAMGCTKRFGIVYVDYK 370
Score = 25.8 bits (50), Expect(3) = 2e-029
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2 / +2
Query: 240 LRRYPKSSAYWFRDVIAG 187
L R+PK+SA WF + G
Sbjct: 377 LSRHPKASALWFSRFLKG 430
>gb|CD234207.1|CD234207 SS1_26_D01.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_26_D01_A012 3', mRNA sequence
Length = 552
Score = 127 bits (272), Expect(2) = 2e-029
Identities = 49/72 (68%), Positives = 57/72 (79%)
Frame = -2 / +3
Query: 369 ELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVIA 190
ELK ID GAN VGYFAWSLLDNFEW GYTS+FG+VYVDF TL+RYPK SAYWFRD+++
Sbjct: 90 ELKKGIDDGANVVGYFAWSLLDNFEWLSGYTSKFGIVYVDFTTLKRYPKDSAYWFRDMLS 269
Query: 189 GSN*DHVRWPQS 154
G+ PQ+
Sbjct: 270 GTGSKAAAAPQT 305
Score = 22.6 bits (43), Expect(2) = 2e-029
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -2 / +3
Query: 456 NGMDDPGNVT 427
NGMD PG++T
Sbjct: 3 NGMDQPGDLT 32
>gb|CW476625.1|CW476625 fsbb001f233j03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f233j03, DNA
sequence
Length = 571
Score = 129 bits (277), Expect = 3e-029
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = -2 / +3
Query: 339 NCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVIAG 187
NCVGYFAWSLLDNFEWKLGYT+RFGLVYVDF+TLRRYPKSSAYWFRDVI+G
Sbjct: 9 NCVGYFAWSLLDNFEWKLGYTARFGLVYVDFKTLRRYPKSSAYWFRDVISG 161
>gb|CF484384.1|CF484384 POL1_25_B01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_25_B01_A002 3', mRNA sequence
Length = 550
Score = 101 bits (216), Expect(2) = 3e-027
Identities = 42/64 (65%), Positives = 47/64 (73%)
Frame = -2 / +2
Query: 369 ELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVIA 190
EL+ AI GAN GYF WSLLDN EW+LGYTSRFG+V+VD T RYPK SA WFR VI
Sbjct: 137 ELQYAIRDGANVFGYFVWSLLDNSEWRLGYTSRFGIVHVDRSTFVRYPKDSARWFRKVIK 316
Query: 189 GSN* 178
+*
Sbjct: 317 NED* 328
Score = 40.9 bits (83), Expect(2) = 3e-027
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -2 / +2
Query: 501 YVKEKYGNPTMLLSENGMDDPGNVTV 424
+ KEK+ NP ML+ ENG+D GN T+
Sbjct: 5 WTKEKFNNPVMLIGENGIDQSGNETL 82
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 676,688,409
Number of Sequences: 832831
Number of extensions: 10522879
Number of successful extensions: 241239
Number of sequences better than 1.0e-020: 200
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 17707683924
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)