TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3203888.2.1
(787 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN126267.1|CN126267 RHOH1_16_D08.b1_A002 Acid- and alkal... 333 e-101
gb|CN145611.1|CN145611 WOUND1_34_C08.b1_A002 Wounded leaves... 326 7e-099
gb|BG463171.1|BG463171 EM1_47_D04.g1_A002 Embryo 1 (EM1) So... 309 1e-093
gb|CF427836.1|CF427836 PH1_11_H10.b1_A002 Phosphorous-defic... 202 2e-074
gb|CX614152.1|CX614152 GABR1_12_H06.b1_A002 GA- or brassino... 231 4e-070
gb|CF488032.1|CF488032 POL1_47_H05.b1_A002 Pollen Sorghum b... 229 1e-069
gb|CW442189.1|CW442189 fsbb001f161l17k0 Sorghum methylation... 171 8e-064
gb|BG103567.1|BG103567 RHIZ2_38_B01.g1_A003 Rhizome2 (RHIZ2... 204 3e-063
gb|CF755772.1|CF755772 DSAF1_1_F09.b1_A011 Drought-stressed... 207 1e-062
gb|CF760639.1|CF760639 DSAF1_63_H06.b1_A011 Drought-stresse... 207 1e-062
gb|CF755852.1|CF755852 DSAF1_1_F09.g1_A011 Drought-stressed... 207 1e-062
gb|CF758643.1|CF758643 DSAF1_34_G11.g1_A011 Drought-stresse... 207 1e-062
gb|BZ366691.1|BZ366691 ic98f11.g1 WGS-SbicolorF (JM107 adap... 170 5e-052
gb|BZ366690.1|BZ366690 ic98f11.b1 WGS-SbicolorF (JM107 adap... 158 1e-048
gb|BE358031.1|BE358031 DG1_23_C08.g1_A002 Dark Grown 1 (DG1... 137 3e-035
gb|CL169566.1|CL169566 104_368_10812727_116_31809_199 Sorgh... 103 1e-032
gb|BE355903.1|BE355903 DG1_11_E02.g1_A002 Dark Grown 1 (DG1... 137 2e-031
gb|CF432952.1|CF432952 NIT1_20_F06.b1_A002 Nitrogen-deficie... 137 2e-031
gb|BE364058.1|BE364058 PI1_11_D01.b1_A002 Pathogen induced ... 123 3e-031
gb|CX612696.1|CX612696 GABR1_4_A05.b1_A002 GA- or brassinol... 108 4e-030
gb|BM328498.1|BM328498 PIC1_29_H11.g1_A002 Pathogen-infecte... 108 2e-029
gb|AY217766.1| Sorghum bicolor caffeic acid O-methyltransfe... 110 9e-028
gb|AF387790.1|AF387790 Sorghum bicolor O-methyltransferase ... 109 1e-027
gb|CW024899.1|CW024899 104_226_10487844_116_30523 Sorghum m... 109 1e-027
gb|BE601309.1|BE601309 PI1_91_D08.g1_A002 Pathogen induced ... 108 6e-027
gb|BE598596.1|BE598596 PI1_84_F02.g1_A002 Pathogen induced ... 122 9e-027
gb|CF675653.1|CF675653 MT Subtractive cDNA library from sor... 106 4e-026
gb|CN128071.1|CN128071 RHOH1_26_G08.g1_A002 Acid- and alkal... 109 2e-025
gb|AW670995.1|AW670995 LG1_278_E11.b1_A002 Light Grown 1 (L... 109 2e-025
gb|AW670997.1|AW670997 LG1_278_H02.b1_A002 Light Grown 1 (L... 109 2e-025
gb|BG050885.1|BG050885 FM1_72_B12.b1_A003 Floral-Induced Me... 108 4e-025
gb|BI098834.1|BI098834 IP1_33_G12.b1_A002 Immature pannicle... 107 6e-025
gb|CN127290.1|CN127290 RHOH1_22_D08.b1_A002 Acid- and alkal... 109 1e-024
gb|CN127992.1|CN127992 RHOH1_26_G08.b1_A002 Acid- and alkal... 109 1e-024
gb|CN131323.1|CN131323 RHOH1_47_F05.b1_A002 Acid- and alkal... 109 1e-024
gb|CN129737.1|CN129737 RHOH1_37_D01.b1_A002 Acid- and alkal... 109 1e-024
gb|BE361873.1|BE361873 DG1_82_G04.g1_A002 Dark Grown 1 (DG1... 107 4e-024
gb|CX610824.1|CX610824 ANR1_21_B08.b1_A002 Anaerobic roots ... 105 2e-023
gb|CN131393.1|CN131393 RHOH1_47_F05.g1_A002 Acid- and alkal... 98 6e-022
gb|BM329106.1|BM329106 PIC1_33_E02.g1_A002 Pathogen-infecte... 90 3e-021
gb|BE359069.1|BE359069 DG1_38_E03.g1_A002 Dark Grown 1 (DG1... 97 5e-021
>gb|CN126267.1|CN126267 RHOH1_16_D08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_16_D08_A002 3', mRNA sequence
Length = 840
Score = 333 bits (721), Expect(2) = e-101
Identities = 139/154 (90%), Positives = 142/154 (92%)
Frame = -1 / +3
Query: 742 GYGAAGGFRGVATLVDVGGSSGACLEMIMRRVPTITEGINFDLPDVVAAAPSIAGVRHVG 563
GYG GGF GVATLVDVGGSSGACLEMIMRRVPTI EGINFDLPDVVA AP+IAGVRHVG
Sbjct: 177 GYGFDGGFHGVATLVDVGGSSGACLEMIMRRVPTIKEGINFDLPDVVADAPAIAGVRHVG 356
Query: 562 GDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAALPDGGKLVACEPVVPEETDSSPG 383
GDMFKSIPSGDAIFMKWVLTTWT+DEC AILRNC AALPDGGKLVACEPVVPEETDSS
Sbjct: 357 GDMFKSIPSGDAIFMKWVLTTWTNDECTAILRNCHAALPDGGKLVACEPVVPEETDSSTR 536
Query: 382 TRALLENDIFVMTPYRTQGRERSEEEFRHLGVDA 281
TRALLENDIFVMT YRTQGRERSEEEF HLG+ A
Sbjct: 537 TRALLENDIFVMTTYRTQGRERSEEEFHHLGIAA 638
Score = 301 bits (652), Expect(2) = 2e-088
Identities = 130/158 (82%), Positives = 136/158 (86%)
Frame = +2 / -2
Query: 281 GVDAEVAELLLGALPPLRPVGGHDEDVVLQQRPRPGAAVRLLRHHRLAGHELAAVRQSGG 460
G DAEV ELLLGALPPLRPVGGHDEDVVLQ+ PRPGAAVRLLRHHRLAG +LAAVRQ G
Sbjct: 638 GGDAEVVELLLGALPPLRPVGGHDEDVVLQKCPRPGAAVRLLRHHRLAGDQLAAVRQRGV 459
Query: 461 AVPQDGRALVVGPRRQNPLHENGITGRDGLEHISANMPHSGDRRRCGDHVGEVEVDALGD 640
AVP+DGRALVVGPRRQNPLHE+GIT DGLEH+SANMPHSGD RR GD VG+VEVD L D
Sbjct: 458 AVPEDGRALVVGPRRQNPLHEDGITRGDGLEHVSANMPHSGDGRRVGDDVGQVEVDTLLD 279
Query: 641 GGDPAHDHLEAGAGASPDVYERCDAAEPAGGAVARRGG 754
GDPAHDHLEAGAGASPDV ER DA EPA AVA G
Sbjct: 278 SGDPAHDHLEAGAGASPDVDERGDAVEPAVEAVAVEEG 165
Score = 264 bits (570), Expect = 2e-069
Identities = 117/147 (79%), Positives = 124/147 (84%)
Frame = +3 / -3
Query: 282 ASTPRWRNSSSERSLPCVR*GVMTKMSFSSSALVPXXXXXXXXXXXXQATSLPPSGKAAG 461
A+ PRW NSSSERSLPCVR* VMTKMSFS SALV QATSLPPSG AA
Sbjct: 637 AAMPRWWNSSSERSLPCVR*VVMTKMSFSRSALVLVLLSVSSGTTGSQATSLPPSGSAAW 458
Query: 462 QFLRMAGHSSSVHVVRTHFMKMASPEGMDLNISPPTCLTPAIDGAAATTSGRSKLMPSVM 641
QFLRMA HSS VHVVRTHFMKMASPEGMDLN+SPPTCLTPA+ GA+ATTSGRSKL+PS++
Sbjct: 457 QFLRMAVHSSLVHVVRTHFMKMASPEGMDLNMSPPTCLTPAMAGASATTSGRSKLIPSLI 278
Query: 642 VGTLRMIISRQAPELPPTSTSVATPRN 722
VGTLRMIISRQAPELPPTSTSVATP N
Sbjct: 277 VGTLRMIISRQAPELPPTSTSVATPWN 197
Score = 95.5 bits (202), Expect(3) = 2e-043
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = -3 / +2
Query: 593 AVYRRSEACWRRYVQVHPFR*CHFHEVGSDDVDRRRVPGHPEELP 459
A +RRSEACWRR+VQVHP *CH HEVGSDDVD+RRV GHP+ELP
Sbjct: 326 AGHRRSEACWRRHVQVHPLW*CHLHEVGSDDVDQRRVHGHPQELP 460
Score = 62.5 bits (130), Expect(3) = 2e-043
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -3 / +2
Query: 383 DEGAAGERHLRHDPLPDAGEGALRGGV 303
DEG +GERHLRHD LPDAGEGALRGGV
Sbjct: 536 DEGTSGERHLRHDHLPDAGEGALRGGV 616
Score = 57.9 bits (120), Expect(3) = 2e-043
Identities = 27/35 (77%), Positives = 27/35 (77%)
Frame = -2 / +1
Query: 753 PPRRATAPPAGSAASQRS*TSGEAPAPASR*SCAG 649
P ATA AGS AS RS TSGEAPAPASR*SCAG
Sbjct: 166 PSSTATASTAGSTASPRSSTSGEAPAPASR*SCAG 270
Score = 56.1 bits (116), Expect(2) = e-101
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = -1 / +3
Query: 283 AAGFTAFRAIYLDPFYAVLEYTK* 212
AAGFT FRAIYLDPFYAVLEYTK*
Sbjct: 633 AAGFTGFRAIYLDPFYAVLEYTK* 704
Score = 46.4 bits (95), Expect(2) = 2e-088
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 212 SLGILEDSIEGVEIDGSEGGEACG 283
SLG+LED IEGVE+DG+E GEA G
Sbjct: 704 SLGVLEDGIEGVEVDGAEAGEAGG 633
>gb|CN145611.1|CN145611 WOUND1_34_C08.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_34_C08_A002 3', mRNA sequence
Length = 744
Score = 326 bits (707), Expect(2) = 7e-099
Identities = 136/154 (88%), Positives = 141/154 (91%)
Frame = -1 / +3
Query: 742 GYGAAGGFRGVATLVDVGGSSGACLEMIMRRVPTITEGINFDLPDVVAAAPSIAGVRHVG 563
GYG GGF GVATLVDVGGSSG CLEMIMRRVPTI EGINFDLP+VVA AP+IAGVRHVG
Sbjct: 81 GYGFDGGFHGVATLVDVGGSSGPCLEMIMRRVPTIKEGINFDLPEVVADAPAIAGVRHVG 260
Query: 562 GDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAALPDGGKLVACEPVVPEETDSSPG 383
GDMFKSIPSGDAIFMKWVLTTWT+DEC AILRNC AALPDGGKLVACEPVVPEETDSS
Sbjct: 261 GDMFKSIPSGDAIFMKWVLTTWTNDECTAILRNCHAALPDGGKLVACEPVVPEETDSSTR 440
Query: 382 TRALLENDIFVMTPYRTQGRERSEEEFRHLGVDA 281
TRALLE+DIFVMT YRTQGRERSEEEF HLG+ A
Sbjct: 441 TRALLESDIFVMTTYRTQGRERSEEEFHHLGIAA 542
Score = 299 bits (647), Expect(2) = 5e-086
Identities = 128/158 (81%), Positives = 136/158 (86%)
Frame = +2 / -2
Query: 281 GVDAEVAELLLGALPPLRPVGGHDEDVVLQQRPRPGAAVRLLRHHRLAGHELAAVRQSGG 460
G DAEV ELLLGALPPLRPVGGHDEDV LQ+ PRPGAAVRLLRHHRLAG +LAAVRQ G
Sbjct: 542 GGDAEVVELLLGALPPLRPVGGHDEDVALQKCPRPGAAVRLLRHHRLAGDQLAAVRQRGV 363
Query: 461 AVPQDGRALVVGPRRQNPLHENGITGRDGLEHISANMPHSGDRRRCGDHVGEVEVDALGD 640
AVP+DGRALVVGPRRQNPLHE+GIT DGLEH+SANMPHSGD RR GD++G+VEVD L D
Sbjct: 362 AVPEDGRALVVGPRRQNPLHEDGITRGDGLEHVSANMPHSGDGRRVGDNLGQVEVDTLLD 183
Query: 641 GGDPAHDHLEAGAGASPDVYERCDAAEPAGGAVARRGG 754
GDPAHDHLEAGAGASPDV ER DA EPA AVA G
Sbjct: 182 SGDPAHDHLEAGAGASPDVDERGDAVEPAVEAVAVEEG 69
Score = 259 bits (560), Expect = 4e-068
Identities = 115/147 (78%), Positives = 122/147 (82%)
Frame = +3 / -3
Query: 282 ASTPRWRNSSSERSLPCVR*GVMTKMSFSSSALVPXXXXXXXXXXXXQATSLPPSGKAAG 461
A+ PRW NSSSERSLPCVR* VMTKMS S SALV QATSLPPSG AA
Sbjct: 541 AAMPRWWNSSSERSLPCVR*VVMTKMSLSRSALVLVLLSVSSGTTGSQATSLPPSGSAAW 362
Query: 462 QFLRMAGHSSSVHVVRTHFMKMASPEGMDLNISPPTCLTPAIDGAAATTSGRSKLMPSVM 641
QFLRMA HSS VHVVRTHFMKMASPEGMDLN+SPPTCLTPA+ GA+ATTSGRSKL+PS++
Sbjct: 361 QFLRMAVHSSLVHVVRTHFMKMASPEGMDLNMSPPTCLTPAMAGASATTSGRSKLIPSLI 182
Query: 642 VGTLRMIISRQAPELPPTSTSVATPRN 722
VGTLRMIISRQ PELPPTSTSVATP N
Sbjct: 181 VGTLRMIISRQGPELPPTSTSVATPWN 101
Score = 95.5 bits (202), Expect(3) = 2e-043
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = -3 / +2
Query: 593 AVYRRSEACWRRYVQVHPFR*CHFHEVGSDDVDRRRVPGHPEELP 459
A +RRSEACWRR+VQVHP *CH HEVGSDDVD+RRV GHP+ELP
Sbjct: 230 AGHRRSEACWRRHVQVHPLW*CHLHEVGSDDVDQRRVHGHPQELP 364
Score = 62.5 bits (130), Expect(3) = 2e-043
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -3 / +2
Query: 383 DEGAAGERHLRHDPLPDAGEGALRGGV 303
DEG +GERHLRHD LPDAGEGALRGGV
Sbjct: 440 DEGTSGERHLRHDHLPDAGEGALRGGV 520
Score = 57.9 bits (120), Expect(3) = 2e-043
Identities = 27/35 (77%), Positives = 27/35 (77%)
Frame = -2 / +1
Query: 753 PPRRATAPPAGSAASQRS*TSGEAPAPASR*SCAG 649
P ATA AGS AS RS TSGEAPAPASR*SCAG
Sbjct: 70 PSSTATASTAGSTASPRSSTSGEAPAPASR*SCAG 174
Score = 56.1 bits (116), Expect(2) = 7e-099
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = -1 / +3
Query: 283 AAGFTAFRAIYLDPFYAVLEYTK* 212
AAGFT FRAIYLDPFYAVLEYTK*
Sbjct: 537 AAGFTGFRAIYLDPFYAVLEYTK* 608
Score = 40.5 bits (82), Expect(2) = 5e-086
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +2 / -2
Query: 212 SLGILEDSIEGVEIDGSEGGEACG 283
SLG+LED I+GVE+ G+E GEA G
Sbjct: 608 SLGVLEDGIKGVEVYGAEAGEAGG 537
>gb|BG463171.1|BG463171 EM1_47_D04.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 585
Score = 309 bits (669), Expect(2) = 1e-093
Identities = 129/141 (91%), Positives = 132/141 (93%)
Frame = -1 / +1
Query: 703 LVDVGGSSGACLEMIMRRVPTITEGINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAI 524
LVDVGGSSGACLEMIMRRVPTI EGINFDLPDVVA AP+IAGVRHVGGDMFKSIPSGDAI
Sbjct: 1 LVDVGGSSGACLEMIMRRVPTIKEGINFDLPDVVADAPAIAGVRHVGGDMFKSIPSGDAI 180
Query: 523 FMKWVLTTWTDDECPAILRNCPAALPDGGKLVACEPVVPEETDSSPGTRALLENDIFVMT 344
FMKWVLTTWT+DEC AILRNC AALPDGGKLVACEPVVPEETDSS TRALLENDIFVMT
Sbjct: 181 FMKWVLTTWTNDECTAILRNCHAALPDGGKLVACEPVVPEETDSSTRTRALLENDIFVMT 360
Query: 343 PYRTQGRERSEEEFRHLGVDA 281
YRTQGRERSEEEF HLG+ A
Sbjct: 361 TYRTQGRERSEEEFHHLGIAA 423
Score = 285 bits (616), Expect(2) = 2e-083
Identities = 120/141 (85%), Positives = 126/141 (89%)
Frame = +2 / -1
Query: 281 GVDAEVAELLLGALPPLRPVGGHDEDVVLQQRPRPGAAVRLLRHHRLAGHELAAVRQSGG 460
G DAEV ELLLGALPPLRPVGGHDEDVVLQ+ PRPGAAVRLLRHHRLAG +LAAVRQ G
Sbjct: 423 GGDAEVVELLLGALPPLRPVGGHDEDVVLQKCPRPGAAVRLLRHHRLAGDQLAAVRQRGV 244
Query: 461 AVPQDGRALVVGPRRQNPLHENGITGRDGLEHISANMPHSGDRRRCGDHVGEVEVDALGD 640
AVP+DGRALVVGPRRQNPLHE+GIT DGLEH+SANMPHSGD RR GD VG+VEVD L D
Sbjct: 243 AVPEDGRALVVGPRRQNPLHEDGITRGDGLEHVSANMPHSGDGRRVGDDVGQVEVDTLLD 64
Query: 641 GGDPAHDHLEAGAGASPDVYE 703
GDPAHDHLEAGAGASPDV E
Sbjct: 63 SGDPAHDHLEAGAGASPDVDE 1
Score = 251 bits (543), Expect = 8e-066
Identities = 111/140 (79%), Positives = 118/140 (84%)
Frame = +3 / -2
Query: 282 ASTPRWRNSSSERSLPCVR*GVMTKMSFSSSALVPXXXXXXXXXXXXQATSLPPSGKAAG 461
A+ PRW NSSSERSLPCVR* VMTKMSFS SALV QATSLPPSG AA
Sbjct: 422 AAMPRWWNSSSERSLPCVR*VVMTKMSFSRSALVLVLLSVSSGTTGSQATSLPPSGSAAW 243
Query: 462 QFLRMAGHSSSVHVVRTHFMKMASPEGMDLNISPPTCLTPAIDGAAATTSGRSKLMPSVM 641
QFLRMA HSS VHVVRTHFMKMASPEGMDLN+SPPTCLTPA+ GA+ATTSGRSKL+PS++
Sbjct: 242 QFLRMAVHSSLVHVVRTHFMKMASPEGMDLNMSPPTCLTPAMAGASATTSGRSKLIPSLI 63
Query: 642 VGTLRMIISRQAPELPPTST 701
VGTLRMIISRQAPELPPTST
Sbjct: 62 VGTLRMIISRQAPELPPTST 3
Score = 95.5 bits (202), Expect(3) = 7e-038
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = -3 / +3
Query: 593 AVYRRSEACWRRYVQVHPFR*CHFHEVGSDDVDRRRVPGHPEELP 459
A +RRSEACWRR+VQVHP *CH HEVGSDDVD+RRV GHP+ELP
Sbjct: 111 AGHRRSEACWRRHVQVHPLW*CHLHEVGSDDVDQRRVHGHPQELP 245
Score = 62.5 bits (130), Expect(3) = 7e-038
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -3 / +3
Query: 383 DEGAAGERHLRHDPLPDAGEGALRGGV 303
DEG +GERHLRHD LPDAGEGALRGGV
Sbjct: 321 DEGTSGERHLRHDHLPDAGEGALRGGV 401
Score = 56.1 bits (116), Expect(2) = 1e-093
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = -1 / +1
Query: 283 AAGFTAFRAIYLDPFYAVLEYTK* 212
AAGFT FRAIYLDPFYAVLEYTK*
Sbjct: 418 AAGFTGFRAIYLDPFYAVLEYTK* 489
Score = 46.4 bits (95), Expect(2) = 2e-083
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +2 / -1
Query: 212 SLGILEDSIEGVEIDGSEGGEACG 283
SLG+LED IEGVE+DG+E GEA G
Sbjct: 489 SLGVLEDGIEGVEVDGAEAGEAGG 418
Score = 39.1 bits (79), Expect(3) = 7e-038
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -2 / +2
Query: 696 TSGEAPAPASR*SCAG 649
TSGEAPAPASR*SCAG
Sbjct: 8 TSGEAPAPASR*SCAG 55
>gb|CF427836.1|CF427836 PH1_11_H10.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_11_H10_A002 3', mRNA sequence
Length = 545
Score = 202 bits (436), Expect(3) = 2e-074
Identities = 83/91 (91%), Positives = 85/91 (93%)
Frame = -1 / +2
Query: 652 RVPTITEGINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAI 473
RVPTI EGINFDLPDVVA AP+IAGVRHVGGDMFKSIPSGDAIFMKWVLTTWT+DEC AI
Sbjct: 2 RVPTIKEGINFDLPDVVADAPAIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTNDECTAI 181
Query: 472 LRNCPAALPDGGKLVACEPVVPEETDSSPGT 380
LRNC AALPDGGKLVACEPVVPEETDSS T
Sbjct: 182 LRNCHAALPDGGKLVACEPVVPEETDSSTRT 274
Score = 178 bits (383), Expect(3) = 2e-065
Identities = 75/94 (79%), Positives = 81/94 (86%)
Frame = +2 / -2
Query: 371 QRPRPGAAVRLLRHHRLAGHELAAVRQSGGAVPQDGRALVVGPRRQNPLHENGITGRDGL 550
+R R GAAVRLLRHHRLAG +LAAVRQ G AVP+DGRALVVGPRRQNPLHE+GIT DGL
Sbjct: 283 RRCRSGAAVRLLRHHRLAGDQLAAVRQRGVAVPEDGRALVVGPRRQNPLHEDGITRGDGL 104
Query: 551 EHISANMPHSGDRRRCGDHVGEVEVDALGDGGDP 652
EH+SANMPHSGD RR GD VG+VEVD L D GDP
Sbjct: 103 EHVSANMPHSGDGRRVGDDVGQVEVDTLLDSGDP 2
Score = 156 bits (336), Expect(2) = 3e-048
Identities = 66/77 (85%), Positives = 72/77 (93%)
Frame = +3 / -3
Query: 423 QATSLPPSGKAAGQFLRMAGHSSSVHVVRTHFMKMASPEGMDLNISPPTCLTPAIDGAAA 602
QATSLPPSG AA QFLRMA HSS VHVVRTHFMKMASPEGMDLN+SPPTCLTPA+ GA+A
Sbjct: 231 QATSLPPSGSAAWQFLRMAVHSSLVHVVRTHFMKMASPEGMDLNMSPPTCLTPAMAGASA 52
Query: 603 TTSGRSKLMPSVMVGTL 653
TTSGRSKL+PS++VGTL
Sbjct: 51 TTSGRSKLIPSLIVGTL 1
Score = 95.5 bits (202), Expect(2) = 4e-029
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = -3 / +1
Query: 593 AVYRRSEACWRRYVQVHPFR*CHFHEVGSDDVDRRRVPGHPEELP 459
A +RRSEACWRR+VQVHP *CH HEVGSDDVD+RRV GHP+ELP
Sbjct: 61 AGHRRSEACWRRHVQVHPLW*CHLHEVGSDDVDQRRVHGHPQELP 195
Score = 65.2 bits (136), Expect(3) = 2e-065
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = +2 / -3
Query: 281 GVDAEVAELLLGALPPLRPVGGHDEDVVL 367
G DAEV ELLLGALPPLRPVGGHDEDVVL
Sbjct: 354 GGDAEVVELLLGALPPLRPVGGHDEDVVL 268
Score = 61.6 bits (128), Expect(3) = 2e-074
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = -1 / +1
Query: 367 ENDIFVMTPYRTQGRERSEEEFRHLGVDA 281
+NDIFVMT YRTQGRERSEEEF HLG+ A
Sbjct: 268 QNDIFVMTTYRTQGRERSEEEFHHLGIAA 354
Score = 57.0 bits (118), Expect(2) = 3e-048
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = +3 / -1
Query: 213 HLVYSRTA*KGSR*MARKAVKPAASTPRWRNSS 311
HLVYSRTA*KGSR*MARK VKPAA W +SS
Sbjct: 419 HLVYSRTA*KGSR*MARKPVKPAAMPRWWNSSS 321
Score = 56.1 bits (116), Expect(3) = 2e-074
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = -1 / +1
Query: 283 AAGFTAFRAIYLDPFYAVLEYTK* 212
AAGFT FRAIYLDPFYAVLEYTK*
Sbjct: 349 AAGFTGFRAIYLDPFYAVLEYTK* 420
Score = 54.2 bits (112), Expect(2) = 4e-029
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = -3 / +3
Query: 374 AAGERHLRHDPLPDAGEGALRGGV 303
AA ERHLRHD LPDAGEGALRGGV
Sbjct: 261 AAPERHLRHDHLPDAGEGALRGGV 332
Score = 46.4 bits (95), Expect(3) = 2e-065
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 212 SLGILEDSIEGVEIDGSEGGEACG 283
SLG+LED IEGVE+DG+E GEA G
Sbjct: 420 SLGVLEDGIEGVEVDGAEAGEAGG 349
>gb|CX614152.1|CX614152 GABR1_12_H06.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_12_H06_A002 3', mRNA sequence
Length = 458
Score = 231 bits (498), Expect(2) = 4e-070
Identities = 95/105 (90%), Positives = 98/105 (93%)
Frame = -1 / +3
Query: 595 APSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAALPDGGKLVACEP 416
AP+IAGVRHVGGDMFKSIPSGDAIFMKWVLTTWT+DEC AILRNC AALPDGGKLVACEP
Sbjct: 3 APAIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTNDECTAILRNCHAALPDGGKLVACEP 182
Query: 415 VVPEETDSSPGTRALLENDIFVMTPYRTQGRERSEEEFRHLGVDA 281
VVPEETDSS TRALLENDIFVMT YRTQGRERSEEEF HLG+ A
Sbjct: 183 VVPEETDSSTRTRALLENDIFVMTTYRTQGRERSEEEFHHLGMAA 317
Score = 211 bits (455), Expect(2) = 9e-060
Identities = 89/105 (84%), Positives = 94/105 (89%)
Frame = +2 / -1
Query: 281 GVDAEVAELLLGALPPLRPVGGHDEDVVLQQRPRPGAAVRLLRHHRLAGHELAAVRQSGG 460
G AEV ELLLGALPPLRPVGGHDEDVVLQ+ PRPGAAVRLLRHHRLAG +LAAVRQ G
Sbjct: 317 GGHAEVVELLLGALPPLRPVGGHDEDVVLQKCPRPGAAVRLLRHHRLAGDQLAAVRQRGV 138
Query: 461 AVPQDGRALVVGPRRQNPLHENGITGRDGLEHISANMPHSGDRRR 595
AVP+DGRALVVGPRRQNPLHE+GI DGLEH+SANMPHSGD RR
Sbjct: 137 AVPEDGRALVVGPRRQNPLHEDGIPRGDGLEHVSANMPHSGDGRR 3
Score = 180 bits (387), Expect = 3e-044
Identities = 80/105 (76%), Positives = 83/105 (79%)
Frame = +3 / -2
Query: 282 ASTPRWRNSSSERSLPCVR*GVMTKMSFSSSALVPXXXXXXXXXXXXQATSLPPSGKAAG 461
A+ PRW NSSSERSLPCVR* VMTKMSFS SALV QATSLPPSG AA
Sbjct: 316 AAMPRWWNSSSERSLPCVR*VVMTKMSFSRSALVLVLLSVSSGTTGSQATSLPPSGSAAW 137
Query: 462 QFLRMAGHSSSVHVVRTHFMKMASPEGMDLNISPPTCLTPAIDGA 596
QFLRMA HSS VHVVRTHFMKMASPEGMDLN+SPPTCLTPA+ GA
Sbjct: 136 QFLRMAVHSSLVHVVRTHFMKMASPEGMDLNMSPPTCLTPAMAGA 2
Score = 93.2 bits (197), Expect(2) = 6e-031
Identities = 35/45 (77%), Positives = 39/45 (86%)
Frame = -3 / +2
Query: 593 AVYRRSEACWRRYVQVHPFR*CHFHEVGSDDVDRRRVPGHPEELP 459
A +RRSEACWRR+VQVHP CH HEVGSDDVD+RRV GHP+ELP
Sbjct: 5 AGHRRSEACWRRHVQVHPLWGCHLHEVGSDDVDQRRVHGHPQELP 139
Score = 62.5 bits (130), Expect(2) = 6e-031
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -3 / +2
Query: 383 DEGAAGERHLRHDPLPDAGEGALRGGV 303
DEG +GERHLRHD LPDAGEGALRGGV
Sbjct: 215 DEGTSGERHLRHDHLPDAGEGALRGGV 295
Score = 55.6 bits (115), Expect(2) = 4e-070
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = -1 / +3
Query: 283 AAGFTAFRAIYLDPFYAVLEYTK 215
AAGFT FRAIYLDPFYAVLEYTK
Sbjct: 312 AAGFTGFRAIYLDPFYAVLEYTK 380
Score = 40.9 bits (83), Expect(2) = 9e-060
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +2 / -1
Query: 212 SLGILEDSIEGVEIDGSEGGEACG 283
SLG+L+D I+GV++DG E GEA G
Sbjct: 383 SLGVLQDGIKGVQVDGPEAGEAGG 312
>gb|CF488032.1|CF488032 POL1_47_H05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_47_H05_A002 3', mRNA sequence
Length = 532
Score = 229 bits (494), Expect(2) = 1e-069
Identities = 94/105 (89%), Positives = 97/105 (92%)
Frame = -1 / +2
Query: 595 APSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAALPDGGKLVACEP 416
AP+IAGVRHVGGDM KSIPSGDAIFMKWVLTTWT+DEC AILRNC AALPDGGKLVACEP
Sbjct: 5 APAIAGVRHVGGDMLKSIPSGDAIFMKWVLTTWTNDECTAILRNCHAALPDGGKLVACEP 184
Query: 415 VVPEETDSSPGTRALLENDIFVMTPYRTQGRERSEEEFRHLGVDA 281
VVPEETDSS TRALLENDIFVMT YRTQGRERSEEEF HLG+ A
Sbjct: 185 VVPEETDSSTRTRALLENDIFVMTTYRTQGRERSEEEFHHLGIAA 319
Score = 217 bits (468), Expect(3) = 1e-064
Identities = 91/105 (86%), Positives = 96/105 (91%)
Frame = +2 / -1
Query: 281 GVDAEVAELLLGALPPLRPVGGHDEDVVLQQRPRPGAAVRLLRHHRLAGHELAAVRQSGG 460
G DAEV ELLLGALPPLRPVGGHDEDVVLQ+ PRPGAAVRLLRHHRLAG +LAAVRQ G
Sbjct: 319 GGDAEVVELLLGALPPLRPVGGHDEDVVLQKCPRPGAAVRLLRHHRLAGDQLAAVRQRGV 140
Query: 461 AVPQDGRALVVGPRRQNPLHENGITGRDGLEHISANMPHSGDRRR 595
AVP+DGRALVVGPRRQNPLHE+GIT DGLEH+SANMPHSGD RR
Sbjct: 139 AVPEDGRALVVGPRRQNPLHEDGITRGDGLEHVSANMPHSGDGRR 5
Score = 178 bits (383), Expect = 1e-043
Identities = 79/106 (74%), Positives = 84/106 (79%)
Frame = +3 / -2
Query: 282 ASTPRWRNSSSERSLPCVR*GVMTKMSFSSSALVPXXXXXXXXXXXXQATSLPPSGKAAG 461
A+ PRW NSSSERSLPCVR* VMTKMSFS SALV QATSLPPSG AA
Sbjct: 318 AAMPRWWNSSSERSLPCVR*VVMTKMSFSRSALVLVLLSVSSGTTGSQATSLPPSGSAAW 139
Query: 462 QFLRMAGHSSSVHVVRTHFMKMASPEGMDLNISPPTCLTPAIDGAA 599
QFLRMA HSS VHVVRTHFMKMASPEGMDL++SPPTCLTPA+ GA+
Sbjct: 138 QFLRMAVHSSLVHVVRTHFMKMASPEGMDLSMSPPTCLTPAMAGAS 1
Score = 93.6 bits (198), Expect(2) = 5e-031
Identities = 35/45 (77%), Positives = 39/45 (86%)
Frame = -3 / +1
Query: 593 AVYRRSEACWRRYVQVHPFR*CHFHEVGSDDVDRRRVPGHPEELP 459
A +RRSEACWRR+ QVHP *CH HEVGSDDVD+RRV GHP+ELP
Sbjct: 7 AGHRRSEACWRRHAQVHPLW*CHLHEVGSDDVDQRRVHGHPQELP 141
Score = 62.5 bits (130), Expect(2) = 5e-031
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -3 / +1
Query: 383 DEGAAGERHLRHDPLPDAGEGALRGGV 303
DEG +GERHLRHD LPDAGEGALRGGV
Sbjct: 217 DEGTSGERHLRHDHLPDAGEGALRGGV 297
Score = 56.1 bits (116), Expect(2) = 1e-069
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = -1 / +2
Query: 283 AAGFTAFRAIYLDPFYAVLEYTK* 212
AAGFT FRAIYLDPFYAVLEYTK*
Sbjct: 314 AAGFTGFRAIYLDPFYAVLEYTK* 385
Score = 46.4 bits (95), Expect(3) = 1e-064
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +2 / -1
Query: 212 SLGILEDSIEGVEIDGSEGGEACG 283
SLG+LED IEGVE+DG+E GEA G
Sbjct: 385 SLGVLEDGIEGVEVDGAEAGEAGG 314
Score = 23.5 bits (45), Expect(3) = 1e-064
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3 / -3
Query: 63 LKERSWLQKLT 95
L+ER W+QKLT
Sbjct: 524 LEERFWIQKLT 492
>gb|CW442189.1|CW442189 fsbb001f161l17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f161l17, DNA
sequence
Length = 666
Score = 171 bits (367), Expect(3) = 8e-064
Identities = 69/80 (86%), Positives = 73/80 (91%)
Frame = -1 / +3
Query: 520 MKWVLTTWTDDECPAILRNCPAALPDGGKLVACEPVVPEETDSSPGTRALLENDIFVMTP 341
M+WVLTTWT+DEC AILRNC AALPDGGKLVACEPVVPEETDSS TRALLENDIF+MT
Sbjct: 324 MQWVLTTWTNDECTAILRNCHAALPDGGKLVACEPVVPEETDSSTRTRALLENDIFLMTT 503
Query: 340 YRTQGRERSEEEFRHLGVDA 281
YRTQGRERSEEEF HLG+ A
Sbjct: 504 YRTQGRERSEEEFHHLGIAA 563
Score = 167 bits (359), Expect(3) = 1e-059
Identities = 70/81 (86%), Positives = 75/81 (92%)
Frame = +2 / -2
Query: 281 GVDAEVAELLLGALPPLRPVGGHDEDVVLQQRPRPGAAVRLLRHHRLAGHELAAVRQSGG 460
G DAEV ELLLGALPPLRPVGGH+EDVVLQ+ PRPGAAVRLLRHHRLAG +LAAVRQ G
Sbjct: 563 GGDAEVVELLLGALPPLRPVGGHEEDVVLQKCPRPGAAVRLLRHHRLAGDQLAAVRQRGV 384
Query: 461 AVPQDGRALVVGPRRQNPLHE 523
AVP+DGRALVVGPRRQNPLH+
Sbjct: 383 AVPEDGRALVVGPRRQNPLHD 321
Score = 119 bits (254), Expect(2) = 2e-034
Identities = 56/80 (70%), Positives = 57/80 (71%)
Frame = +3 / -3
Query: 282 ASTPRWRNSSSERSLPCVR*GVMTKMSFSSSALVPXXXXXXXXXXXXQATSLPPSGKAAG 461
A+ PRW NSSSERSLPCVR* VM KMSFS SALV QATSLPPSG AA
Sbjct: 562 AAMPRWWNSSSERSLPCVR*VVMRKMSFSRSALVLVLLSVSSGTTGSQATSLPPSGSAAW 383
Query: 462 QFLRMAGHSSSVHVVRTHFM 521
QFLRMA HSS VHVVRTH M
Sbjct: 382 QFLRMAVHSSLVHVVRTHCM 323
Score = 59.3 bits (123), Expect(3) = 7e-028
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -3 / +2
Query: 383 DEGAAGERHLRHDPLPDAGEGALRGGV 303
DEG +GERHL HD LPDAGEGALRGGV
Sbjct: 461 DEGTSGERHLPHDHLPDAGEGALRGGV 541
Score = 57.4 bits (119), Expect(3) = 8e-064
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = -1 / +2
Query: 586 IAGVRHVGGDMFKSIPSGDAIFMK 515
+ GVRHVGGDMFKSIPSGDAIFMK
Sbjct: 182 VTGVRHVGGDMFKSIPSGDAIFMK 253
Score = 56.5 bits (117), Expect(3) = 1e-059
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +3 / -1
Query: 516 FMKMASPEGMDLNISPPTCLTP 581
FMKMASPEGMDLN+SPPTCLTP
Sbjct: 252 FMKMASPEGMDLNMSPPTCLTP 187
Score = 56.1 bits (116), Expect(3) = 8e-064
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = -1 / +3
Query: 283 AAGFTAFRAIYLDPFYAVLEYTK* 212
AAGFT FRAIYLDPFYAVLEYTK*
Sbjct: 558 AAGFTGFRAIYLDPFYAVLEYTK* 629
Score = 52.4 bits (108), Expect(3) = 7e-028
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = -2 / +1
Query: 516 SGF*RRGPTTSARPS*GTAPPLCRT 442
SGF*RRGPTTSARPS GTA P CRT
Sbjct: 328 SGF*RRGPTTSARPSSGTATPRCRT 402
Score = 51.5 bits (106), Expect(3) = 7e-028
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -3 / +1
Query: 581 RSEACWRRYVQVHPFR*CHFHE 516
RSEACWRR+VQVHP *CH HE
Sbjct: 187 RSEACWRRHVQVHPLW*CHLHE 252
Score = 48.3 bits (99), Expect(2) = 2e-034
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +2 / -3
Query: 515 LHENGITGRDGLEHISANMPHS 580
LHE+GIT DGLEH+SANMPHS
Sbjct: 253 LHEDGITRGDGLEHVSANMPHS 188
Score = 46.4 bits (95), Expect(3) = 1e-059
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 212 SLGILEDSIEGVEIDGSEGGEACG 283
SLG+LED IEGVE+DG+E GEA G
Sbjct: 629 SLGVLEDGIEGVEVDGAEAGEAGG 558
>gb|BG103567.1|BG103567 RHIZ2_38_B01.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 550
Score = 204 bits (440), Expect(2) = 3e-063
Identities = 84/92 (91%), Positives = 86/92 (93%)
Frame = -1 / +1
Query: 556 MFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAALPDGGKLVACEPVVPEETDSSPGTR 377
MFKSIPSGDAIFMKWVLTTWT+DEC AILRNC AALPDGGKLVACEPVVPEETDSS TR
Sbjct: 1 MFKSIPSGDAIFMKWVLTTWTNDECTAILRNCHAALPDGGKLVACEPVVPEETDSSTRTR 180
Query: 376 ALLENDIFVMTPYRTQGRERSEEEFRHLGVDA 281
ALLENDIFVMT YRTQGRERSEEEFRHLG+ A
Sbjct: 181 ALLENDIFVMTTYRTQGRERSEEEFRHLGIAA 276
Score = 194 bits (418), Expect(4) = 4e-062
Identities = 82/92 (89%), Positives = 86/92 (93%)
Frame = +2 / -2
Query: 281 GVDAEVAELLLGALPPLRPVGGHDEDVVLQQRPRPGAAVRLLRHHRLAGHELAAVRQSGG 460
G DAEVAELLLGALPPLRPVGGHDEDVVLQ+ PRPGAAVRLLRHHRLAG +LAAVRQ G
Sbjct: 276 GGDAEVAELLLGALPPLRPVGGHDEDVVLQKCPRPGAAVRLLRHHRLAGDQLAAVRQRGV 97
Query: 461 AVPQDGRALVVGPRRQNPLHENGITGRDGLEH 556
AVP+DGRALVVGPRRQNPLHE+GIT RDGLEH
Sbjct: 96 AVPEDGRALVVGPRRQNPLHEDGITRRDGLEH 1
Score = 155 bits (333), Expect(2) = 1e-044
Identities = 70/91 (76%), Positives = 71/91 (78%)
Frame = +3 / -3
Query: 282 ASTPRWRNSSSERSLPCVR*GVMTKMSFSSSALVPXXXXXXXXXXXXQATSLPPSGKAAG 461
A+ PRWRNSSSERSLPCVR* VMTKMSFS SALV QATSLPPSG AA
Sbjct: 275 AAMPRWRNSSSERSLPCVR*VVMTKMSFSRSALVLVLLSVSSGTTGSQATSLPPSGSAAW 96
Query: 462 QFLRMAGHSSSVHVVRTHFMKMASPEGMDLN 554
QFLRMA HSS VHVVRTHFMKMASPEGMDLN
Sbjct: 95 QFLRMAVHSSLVHVVRTHFMKMASPEGMDLN 3
Score = 74.4 bits (156), Expect(2) = 2e-025
Identities = 33/38 (86%), Positives = 33/38 (86%)
Frame = -2 / +2
Query: 555 CSSPSLPVMPFS*SGF*RRGPTTSARPS*GTAPPLCRT 442
CSSPSL VMP S*SGF*RRGPTTSARPS GTA P CRT
Sbjct: 2 CSSPSLLVMPSS*SGF*RRGPTTSARPSSGTATPRCRT 115
Score = 62.5 bits (130), Expect(2) = 2e-025
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -3 / +3
Query: 383 DEGAAGERHLRHDPLPDAGEGALRGGV 303
DEG +GERHLRHD LPDAGEGALRGGV
Sbjct: 174 DEGTSGERHLRHDHLPDAGEGALRGGV 254
Score = 59.3 bits (123), Expect(2) = 3e-063
Identities = 28/43 (65%), Positives = 29/43 (67%)
Frame = -1 / +1
Query: 283 AAGFTAFRAIYLDPFYAVLEYTK*SPLHPPKSPCELNSRITNR 155
AAGFT FRAIYLDPFYAVLEYTK* P + ITNR
Sbjct: 271 AAGFTGFRAIYLDPFYAVLEYTK*ISQIKPSCVSLASCIITNR 399
Score = 51.0 bits (105), Expect(4) = 4e-062
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +3 / -3
Query: 213 HLVYSRTA*KGSR*MARKAVKPAA 284
HLVYSRTA*KGSR*MARK VKPAA
Sbjct: 341 HLVYSRTA*KGSR*MARKPVKPAA 270
Score = 46.4 bits (95), Expect(2) = 1e-044
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 212 SLGILEDSIEGVEIDGSEGGEACG 283
SLG+LED IEGVE+DG+E GEA G
Sbjct: 342 SLGVLEDGIEGVEVDGAEAGEAGG 271
Score = 28.1 bits (55), Expect(4) = 4e-062
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1 / -1
Query: 154 ICSLFCYSTRKEIWADGGEITWYTRGQH 237
ICSL K + A TW TRG+H
Sbjct: 400 ICSLLYMMLEKHMMA*FERFTWCTRGRH 317
Score = 23.5 bits (45), Expect(4) = 4e-062
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3 / -3
Query: 63 LKERSWLQKLT 95
L+ER W+QKLT
Sbjct: 488 LEERFWIQKLT 456
>gb|CF755772.1|CF755772 DSAF1_1_F09.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_1_F09_A011 5', mRNA sequence
Length = 510
Score = 207 bits (447), Expect(2) = 1e-062
Identities = 85/94 (90%), Positives = 87/94 (92%)
Frame = -1 / +3
Query: 562 GDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAALPDGGKLVACEPVVPEETDSSPG 383
GDMFKSIPSGDAIFMKWVLTTWT+DEC AILRNC AALPDGGKLVACEPVVPEETDSS
Sbjct: 3 GDMFKSIPSGDAIFMKWVLTTWTNDECTAILRNCHAALPDGGKLVACEPVVPEETDSSTR 182
Query: 382 TRALLENDIFVMTPYRTQGRERSEEEFRHLGVDA 281
TRALLENDIFVMT YRTQGRERSEEEF HLG+ A
Sbjct: 183 TRALLENDIFVMTTYRTQGRERSEEEFHHLGIAA 284
Score = 192 bits (414), Expect(3) = 1e-056
Identities = 81/94 (86%), Positives = 86/94 (91%)
Frame = +2 / -2
Query: 281 GVDAEVAELLLGALPPLRPVGGHDEDVVLQQRPRPGAAVRLLRHHRLAGHELAAVRQSGG 460
G DAEV ELLLGALPPLRPVGGHDEDVVLQ+ PRPGAAVRLLRHHRLAG +LAAVRQ G
Sbjct: 284 GGDAEVVELLLGALPPLRPVGGHDEDVVLQKCPRPGAAVRLLRHHRLAGDQLAAVRQRGV 105
Query: 461 AVPQDGRALVVGPRRQNPLHENGITGRDGLEHIS 562
AVP+DGRALVVGPRRQNPLHE+GIT DGLEH+S
Sbjct: 104 AVPEDGRALVVGPRRQNPLHEDGITRGDGLEHVS 3
Score = 157 bits (337), Expect = 2e-037
Identities = 71/94 (75%), Positives = 73/94 (77%)
Frame = +3 / -3
Query: 282 ASTPRWRNSSSERSLPCVR*GVMTKMSFSSSALVPXXXXXXXXXXXXQATSLPPSGKAAG 461
A+ PRW NSSSERSLPCVR* VMTKMSFS SALV QATSLPPSG AA
Sbjct: 283 AAMPRWWNSSSERSLPCVR*VVMTKMSFSRSALVLVLLSVSSGTTGSQATSLPPSGSAAW 104
Query: 462 QFLRMAGHSSSVHVVRTHFMKMASPEGMDLNISP 563
QFLRMA HSS VHVVRTHFMKMASPEGMDLN+SP
Sbjct: 103 QFLRMAVHSSLVHVVRTHFMKMASPEGMDLNMSP 2
Score = 74.8 bits (157), Expect(2) = 2e-025
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -2 / +1
Query: 564 AEICSSPSLPVMPFS*SGF*RRGPTTSARPS*GTAPPLCRT 442
AE CSSPS VMP S*SGF*RRGPTTSARPS GTA P CRT
Sbjct: 1 AETCSSPSPLVMPSS*SGF*RRGPTTSARPSSGTATPRCRT 123
Score = 62.5 bits (130), Expect(2) = 2e-025
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -3 / +2
Query: 383 DEGAAGERHLRHDPLPDAGEGALRGGV 303
DEG +GERHLRHD LPDAGEGALRGGV
Sbjct: 182 DEGTSGERHLRHDHLPDAGEGALRGGV 262
Score = 54.2 bits (112), Expect(2) = 1e-062
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = -1 / +3
Query: 283 AAGFTAFRAIYLDPFYAVLEYTK* 212
AAGFT FR IYLDPFYAVLEYTK*
Sbjct: 279 AAGFTGFRGIYLDPFYAVLEYTK* 350
Score = 43.7 bits (89), Expect(3) = 1e-056
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +2 / -2
Query: 212 SLGILEDSIEGVEIDGSEGGEACG 283
SLG+LED IEGVE+D +E GEA G
Sbjct: 350 SLGVLEDGIEGVEVDAAEAGEAGG 279
Score = 24.0 bits (46), Expect(3) = 1e-056
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3 / -3
Query: 63 LKERSWLQKLTLSTDSRQ 116
L+ER W+QKLT S Q
Sbjct: 487 LEERFWIQKLTTVEYSAQ 434
>gb|CF760639.1|CF760639 DSAF1_63_H06.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_63_H06_A011 5', mRNA sequence
Length = 486
Score = 207 bits (447), Expect(2) = 1e-062
Identities = 85/94 (90%), Positives = 87/94 (92%)
Frame = -1 / +3
Query: 562 GDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAALPDGGKLVACEPVVPEETDSSPG 383
GDMFKSIPSGDAIFMKWVLTTWT+DEC AILRNC AALPDGGKLVACEPVVPEETDSS
Sbjct: 3 GDMFKSIPSGDAIFMKWVLTTWTNDECTAILRNCHAALPDGGKLVACEPVVPEETDSSTR 182
Query: 382 TRALLENDIFVMTPYRTQGRERSEEEFRHLGVDA 281
TRALLENDIFVMT YRTQGRERSEEEF HLG+ A
Sbjct: 183 TRALLENDIFVMTTYRTQGRERSEEEFHHLGIAA 284
Score = 192 bits (414), Expect(3) = 5e-056
Identities = 81/94 (86%), Positives = 86/94 (91%)
Frame = +2 / -2
Query: 281 GVDAEVAELLLGALPPLRPVGGHDEDVVLQQRPRPGAAVRLLRHHRLAGHELAAVRQSGG 460
G DAEV ELLLGALPPLRPVGGHDEDVVLQ+ PRPGAAVRLLRHHRLAG +LAAVRQ G
Sbjct: 284 GGDAEVVELLLGALPPLRPVGGHDEDVVLQKCPRPGAAVRLLRHHRLAGDQLAAVRQRGV 105
Query: 461 AVPQDGRALVVGPRRQNPLHENGITGRDGLEHIS 562
AVP+DGRALVVGPRRQNPLHE+GIT DGLEH+S
Sbjct: 104 AVPEDGRALVVGPRRQNPLHEDGITRGDGLEHVS 3
Score = 157 bits (337), Expect(2) = 4e-038
Identities = 71/94 (75%), Positives = 73/94 (77%)
Frame = +3 / -3
Query: 282 ASTPRWRNSSSERSLPCVR*GVMTKMSFSSSALVPXXXXXXXXXXXXQATSLPPSGKAAG 461
A+ PRW NSSSERSLPCVR* VMTKMSFS SALV QATSLPPSG AA
Sbjct: 283 AAMPRWWNSSSERSLPCVR*VVMTKMSFSRSALVLVLLSVSSGTTGSQATSLPPSGSAAW 104
Query: 462 QFLRMAGHSSSVHVVRTHFMKMASPEGMDLNISP 563
QFLRMA HSS VHVVRTHFMKMASPEGMDLN+SP
Sbjct: 103 QFLRMAVHSSLVHVVRTHFMKMASPEGMDLNMSP 2
Score = 74.8 bits (157), Expect(2) = 2e-025
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -2 / +1
Query: 564 AEICSSPSLPVMPFS*SGF*RRGPTTSARPS*GTAPPLCRT 442
AE CSSPS VMP S*SGF*RRGPTTSARPS GTA P CRT
Sbjct: 1 AETCSSPSPLVMPSS*SGF*RRGPTTSARPSSGTATPRCRT 123
Score = 62.5 bits (130), Expect(2) = 2e-025
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -3 / +2
Query: 383 DEGAAGERHLRHDPLPDAGEGALRGGV 303
DEG +GERHLRHD LPDAGEGALRGGV
Sbjct: 182 DEGTSGERHLRHDHLPDAGEGALRGGV 262
Score = 54.2 bits (112), Expect(2) = 1e-062
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = -1 / +3
Query: 283 AAGFTAFRAIYLDPFYAVLEYTK* 212
AAGFT FR IYLDPFYAVLEYTK*
Sbjct: 279 AAGFTGFRGIYLDPFYAVLEYTK* 350
Score = 43.7 bits (89), Expect(3) = 5e-056
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +2 / -2
Query: 212 SLGILEDSIEGVEIDGSEGGEACG 283
SLG+LED IEGVE+D +E GEA G
Sbjct: 350 SLGVLEDGIEGVEVDAAEAGEAGG 279
Score = 22.6 bits (43), Expect(2) = 4e-038
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1 / -1
Query: 181 RKEIWADGGEITWYTRGQH 237
R+ + A TW TRG+H
Sbjct: 381 RENMMA*SERFTWCTRGRH 325
Score = 22.1 bits (42), Expect(3) = 5e-056
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3 / -3
Query: 66 KERSWLQKLTLSTDSRQ 116
+ER W+QKLT S Q
Sbjct: 484 EERFWIQKLTTVEYSAQ 434
>gb|CF755852.1|CF755852 DSAF1_1_F09.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_1_F09_A011 3', mRNA sequence
Length = 484
Score = 207 bits (447), Expect(2) = 1e-062
Identities = 85/94 (90%), Positives = 87/94 (92%)
Frame = -1 / +3
Query: 562 GDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAALPDGGKLVACEPVVPEETDSSPG 383
GDMFKSIPSGDAIFMKWVLTTWT+DEC AILRNC AALPDGGKLVACEPVVPEETDSS
Sbjct: 3 GDMFKSIPSGDAIFMKWVLTTWTNDECTAILRNCHAALPDGGKLVACEPVVPEETDSSTR 182
Query: 382 TRALLENDIFVMTPYRTQGRERSEEEFRHLGVDA 281
TRALLENDIFVMT YRTQGRERSEEEF HLG+ A
Sbjct: 183 TRALLENDIFVMTTYRTQGRERSEEEFHHLGIAA 284
Score = 192 bits (414), Expect(2) = 5e-055
Identities = 81/94 (86%), Positives = 86/94 (91%)
Frame = +2 / -3
Query: 281 GVDAEVAELLLGALPPLRPVGGHDEDVVLQQRPRPGAAVRLLRHHRLAGHELAAVRQSGG 460
G DAEV ELLLGALPPLRPVGGHDEDVVLQ+ PRPGAAVRLLRHHRLAG +LAAVRQ G
Sbjct: 284 GGDAEVVELLLGALPPLRPVGGHDEDVVLQKCPRPGAAVRLLRHHRLAGDQLAAVRQRGV 105
Query: 461 AVPQDGRALVVGPRRQNPLHENGITGRDGLEHIS 562
AVP+DGRALVVGPRRQNPLHE+GIT DGLEH+S
Sbjct: 104 AVPEDGRALVVGPRRQNPLHEDGITRGDGLEHVS 3
Score = 157 bits (338), Expect = 2e-037
Identities = 71/94 (75%), Positives = 73/94 (77%)
Frame = +3 / -1
Query: 282 ASTPRWRNSSSERSLPCVR*GVMTKMSFSSSALVPXXXXXXXXXXXXQATSLPPSGKAAG 461
A+ PRW NSSSERSLPCVR* VMTKMSFS SALV QATSLPPSG AA
Sbjct: 283 AAMPRWWNSSSERSLPCVR*VVMTKMSFSKSALVLVLLSVSSGTTGSQATSLPPSGSAAW 104
Query: 462 QFLRMAGHSSSVHVVRTHFMKMASPEGMDLNISP 563
QFLRMA HSS VHVVRTHFMKMASPEGMDLN+SP
Sbjct: 103 QFLRMAVHSSLVHVVRTHFMKMASPEGMDLNMSP 2
Score = 74.8 bits (157), Expect(2) = 4e-025
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -2 / +1
Query: 564 AEICSSPSLPVMPFS*SGF*RRGPTTSARPS*GTAPPLCRT 442
AE CSSPS VMP S*SGF*RRGPTTSARPS GTA P CRT
Sbjct: 1 AETCSSPSPLVMPSS*SGF*RRGPTTSARPSSGTATPRCRT 123
Score = 61.1 bits (127), Expect(2) = 4e-025
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -3 / +2
Query: 383 DEGAAGERHLRHDPLPDAGEGALRGGV 303
DEG GERHLRHD LPDAGEGALRGGV
Sbjct: 182 DEGTFGERHLRHDHLPDAGEGALRGGV 262
Score = 54.2 bits (112), Expect(2) = 1e-062
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = -1 / +3
Query: 283 AAGFTAFRAIYLDPFYAVLEYTK* 212
AAGFT FR IYLDPFYAVLEYTK*
Sbjct: 279 AAGFTGFRGIYLDPFYAVLEYTK* 350
Score = 43.7 bits (89), Expect(2) = 5e-055
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +2 / -3
Query: 212 SLGILEDSIEGVEIDGSEGGEACG 283
SLG+LED IEGVE+D +E GEA G
Sbjct: 350 SLGVLEDGIEGVEVDAAEAGEAGG 279
>gb|CF758643.1|CF758643 DSAF1_34_G11.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_34_G11_A011 3', mRNA sequence
Length = 485
Score = 207 bits (447), Expect(2) = 1e-062
Identities = 85/94 (90%), Positives = 87/94 (92%)
Frame = -1 / +3
Query: 562 GDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAALPDGGKLVACEPVVPEETDSSPG 383
GDMFKSIPSGDAIFMKWVLTTWT+DEC AILRNC AALPDGGKLVACEPVVPEETDSS
Sbjct: 3 GDMFKSIPSGDAIFMKWVLTTWTNDECTAILRNCHAALPDGGKLVACEPVVPEETDSSTR 182
Query: 382 TRALLENDIFVMTPYRTQGRERSEEEFRHLGVDA 281
TRALLENDIFVMT YRTQGRERSEEEF HLG+ A
Sbjct: 183 TRALLENDIFVMTTYRTQGRERSEEEFHHLGIAA 284
Score = 192 bits (414), Expect(3) = 5e-056
Identities = 81/94 (86%), Positives = 86/94 (91%)
Frame = +2 / -1
Query: 281 GVDAEVAELLLGALPPLRPVGGHDEDVVLQQRPRPGAAVRLLRHHRLAGHELAAVRQSGG 460
G DAEV ELLLGALPPLRPVGGHDEDVVLQ+ PRPGAAVRLLRHHRLAG +LAAVRQ G
Sbjct: 284 GGDAEVVELLLGALPPLRPVGGHDEDVVLQKCPRPGAAVRLLRHHRLAGDQLAAVRQRGV 105
Query: 461 AVPQDGRALVVGPRRQNPLHENGITGRDGLEHIS 562
AVP+DGRALVVGPRRQNPLHE+GIT DGLEH+S
Sbjct: 104 AVPEDGRALVVGPRRQNPLHEDGITRGDGLEHVS 3
Score = 157 bits (337), Expect = 2e-037
Identities = 71/94 (75%), Positives = 73/94 (77%)
Frame = +3 / -2
Query: 282 ASTPRWRNSSSERSLPCVR*GVMTKMSFSSSALVPXXXXXXXXXXXXQATSLPPSGKAAG 461
A+ PRW NSSSERSLPCVR* VMTKMSFS SALV QATSLPPSG AA
Sbjct: 283 AAMPRWWNSSSERSLPCVR*VVMTKMSFSRSALVLVLLSVSSGTTGSQATSLPPSGSAAW 104
Query: 462 QFLRMAGHSSSVHVVRTHFMKMASPEGMDLNISP 563
QFLRMA HSS VHVVRTHFMKMASPEGMDLN+SP
Sbjct: 103 QFLRMAVHSSLVHVVRTHFMKMASPEGMDLNMSP 2
Score = 74.8 bits (157), Expect(2) = 2e-025
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -2 / +1
Query: 564 AEICSSPSLPVMPFS*SGF*RRGPTTSARPS*GTAPPLCRT 442
AE CSSPS VMP S*SGF*RRGPTTSARPS GTA P CRT
Sbjct: 1 AETCSSPSPLVMPSS*SGF*RRGPTTSARPSSGTATPRCRT 123
Score = 62.5 bits (130), Expect(2) = 2e-025
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -3 / +2
Query: 383 DEGAAGERHLRHDPLPDAGEGALRGGV 303
DEG +GERHLRHD LPDAGEGALRGGV
Sbjct: 182 DEGTSGERHLRHDHLPDAGEGALRGGV 262
Score = 54.2 bits (112), Expect(2) = 1e-062
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = -1 / +3
Query: 283 AAGFTAFRAIYLDPFYAVLEYTK* 212
AAGFT FR IYLDPFYAVLEYTK*
Sbjct: 279 AAGFTGFRGIYLDPFYAVLEYTK* 350
Score = 43.7 bits (89), Expect(3) = 5e-056
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +2 / -1
Query: 212 SLGILEDSIEGVEIDGSEGGEACG 283
SLG+LED IEGVE+D +E GEA G
Sbjct: 350 SLGVLEDGIEGVEVDAAEAGEAGG 279
Score = 22.1 bits (42), Expect(3) = 5e-056
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3 / -2
Query: 66 KERSWLQKLTLSTDSRQ 116
+ER W+QKLT S Q
Sbjct: 484 EERFWIQKLTTVEYSAQ 434
>gb|BZ366691.1|BZ366691 ic98f11.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic98f11 5', DNA sequence
Length = 500
Score = 170 bits (365), Expect(2) = 5e-052
Identities = 69/79 (87%), Positives = 72/79 (91%)
Frame = -1 / +1
Query: 517 KWVLTTWTDDECPAILRNCPAALPDGGKLVACEPVVPEETDSSPGTRALLENDIFVMTPY 338
+WVLTTWT+DEC AILRNC AALPDGGKLVACEPVVPEETDSS TRALLENDIFVMT Y
Sbjct: 1 QWVLTTWTNDECTAILRNCHAALPDGGKLVACEPVVPEETDSSTRTRALLENDIFVMTTY 180
Query: 337 RTQGRERSEEEFRHLGVDA 281
RTQGRERSEEEF HLG+ A
Sbjct: 181 RTQGRERSEEEFHHLGIAA 237
Score = 164 bits (353), Expect(3) = 5e-049
Identities = 70/79 (88%), Positives = 73/79 (92%)
Frame = +2 / -3
Query: 281 GVDAEVAELLLGALPPLRPVGGHDEDVVLQQRPRPGAAVRLLRHHRLAGHELAAVRQSGG 460
G DAEV ELLLGALPPLRPVGGHDEDVVLQ+ PRPGAAVRLLRHHRLAG +LAAVRQ G
Sbjct: 237 GGDAEVVELLLGALPPLRPVGGHDEDVVLQKCPRPGAAVRLLRHHRLAGDQLAAVRQRGV 58
Query: 461 AVPQDGRALVVGPRRQNPL 517
AVP+DGRALVVGPRRQNPL
Sbjct: 57 AVPEDGRALVVGPRRQNPL 1
Score = 120 bits (257), Expect = 2e-026
Identities = 56/78 (71%), Positives = 57/78 (73%)
Frame = +3 / -1
Query: 282 ASTPRWRNSSSERSLPCVR*GVMTKMSFSSSALVPXXXXXXXXXXXXQATSLPPSGKAAG 461
A+ PRW NSSSERSLPCVR* VMTKMSFS SALV QATSLPPSG AA
Sbjct: 236 AAMPRWWNSSSERSLPCVR*VVMTKMSFSRSALVLVLLSVSSGTTGSQATSLPPSGSAAW 57
Query: 462 QFLRMAGHSSSVHVVRTH 515
QFLRMA HSS VHVVRTH
Sbjct: 56 QFLRMAVHSSLVHVVRTH 3
Score = 56.1 bits (116), Expect(2) = 5e-052
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = -1 / +1
Query: 283 AAGFTAFRAIYLDPFYAVLEYTK* 212
AAGFT FRAIYLDPFYAVLEYTK*
Sbjct: 232 AAGFTGFRAIYLDPFYAVLEYTK* 303
Score = 46.4 bits (95), Expect(3) = 5e-049
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 212 SLGILEDSIEGVEIDGSEGGEACG 283
SLG+LED IEGVE+DG+E GEA G
Sbjct: 303 SLGVLEDGIEGVEVDGAEAGEAGG 232
Score = 23.5 bits (45), Expect(3) = 5e-049
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3 / -2
Query: 63 LKERSWLQKLT 95
L+ER W+QKLT
Sbjct: 442 LEERFWIQKLT 410
>gb|BZ366690.1|BZ366690 ic98f11.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic98f11 5', DNA sequence
Length = 500
Score = 158 bits (340), Expect(2) = 1e-048
Identities = 65/74 (87%), Positives = 67/74 (90%)
Frame = -1 / -1
Query: 502 TWTDDECPAILRNCPAALPDGGKLVACEPVVPEETDSSPGTRALLENDIFVMTPYRTQGR 323
TWT+DEC AILRNC AALPDGGKLVACEPVVPEETDSS TRALLENDIFVMT YRTQGR
Sbjct: 500 TWTNDECTAILRNCHAALPDGGKLVACEPVVPEETDSSTRTRALLENDIFVMTTYRTQGR 321
Query: 322 ERSEEEFRHLGVDA 281
ERSEEEF HLG+ A
Sbjct: 320 ERSEEEFHHLGIAA 279
Score = 152 bits (326), Expect(3) = 2e-045
Identities = 65/74 (87%), Positives = 68/74 (91%)
Frame = +2 / +3
Query: 281 GVDAEVAELLLGALPPLRPVGGHDEDVVLQQRPRPGAAVRLLRHHRLAGHELAAVRQSGG 460
G DAEV ELLLGALPPLRPVGGHDEDVVLQ+ PRPGAAVRLLRHHRLAG +LAAVRQ G
Sbjct: 279 GGDAEVVELLLGALPPLRPVGGHDEDVVLQKCPRPGAAVRLLRHHRLAGDQLAAVRQRGV 458
Query: 461 AVPQDGRALVVGPR 502
AVP+DGRALVVGPR
Sbjct: 459 AVPEDGRALVVGPR 500
Score = 108 bits (231), Expect = 9e-023
Identities = 51/73 (69%), Positives = 52/73 (71%)
Frame = +3 / +1
Query: 282 ASTPRWRNSSSERSLPCVR*GVMTKMSFSSSALVPXXXXXXXXXXXXQATSLPPSGKAAG 461
A+ PRW NSSSERSLPCVR* VMTKMSFS SALV QATSLPPSG AA
Sbjct: 280 AAMPRWWNSSSERSLPCVR*VVMTKMSFSRSALVLVLLSVSSGTTGSQATSLPPSGSAAW 459
Query: 462 QFLRMAGHSSSVH 500
QFLRMA HSS VH
Sbjct: 460 QFLRMAVHSSLVH 498
Score = 56.1 bits (116), Expect(2) = 1e-048
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = -1 / -1
Query: 283 AAGFTAFRAIYLDPFYAVLEYTK* 212
AAGFT FRAIYLDPFYAVLEYTK*
Sbjct: 284 AAGFTGFRAIYLDPFYAVLEYTK* 213
Score = 46.4 bits (95), Expect(3) = 2e-045
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +2 / +3
Query: 212 SLGILEDSIEGVEIDGSEGGEACG 283
SLG+LED IEGVE+DG+E GEA G
Sbjct: 213 SLGVLEDGIEGVEVDGAEAGEAGG 284
Score = 23.5 bits (45), Expect(3) = 2e-045
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 63 LKERSWLQKLT 95
L+ER W+QKLT
Sbjct: 74 LEERFWIQKLT 106
>gb|BE358031.1|BE358031 DG1_23_C08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 674
Score = 137 bits (294), Expect(2) = 3e-035
Identities = 59/140 (42%), Positives = 84/140 (60%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP V+A AP I GV HVGG+MF ++P GDAI +KW+L W D +C IL+NC AA
Sbjct: 94 GINYDLPRVIAQAPPIEGVEHVGGNMFDNVPRGDAIILKWILHDWGDKDCVKILKNCYAA 273
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVMTPYRTQGRERSEEEFRHLGVDAAGF 272
LP G ++ E ++PE + + ++ D +M Y +G+ER+E+E L +A
Sbjct: 274 LPVNGTMIILEYILPETPEETLTSQLAFNFDFGMMLMYGAKGKERTEKELSELAREAGFS 453
Query: 271 TAFRAIYLDPFYAVLEYTK* 212
A Y+ LE+TK*
Sbjct: 454 GDCTATYIFASIWALEFTK* 513
Score = 32.7 bits (65), Expect(2) = 3e-035
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1 / +1
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF + LVDVGG+ G L+MI + I+
Sbjct: 4 GFENYSVLVDVGGNKGTTLQMIRSQYENIS 93
>gb|CL169566.1|CL169566 104_368_10812727_116_31809_199 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10812727, DNA
sequence
Length = 747
Score = 103 bits (220), Expect(2) = 1e-032
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = -1 / -3
Query: 520 MKWVLTTWTDDECPAILRNCPAALPDGGKLVACEPVVPEETDSS 389
M+WVLTTWT+DEC AILRNC AALPDGGKLVACEPVVPEETDSS
Sbjct: 133 MQWVLTTWTNDECTAILRNCHAALPDGGKLVACEPVVPEETDSS 2
Score = 94.1 bits (199), Expect(2) = 2e-029
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = +2 / +2
Query: 389 AAVRLLRHHRLAGHELAAVRQSGGAVPQDGRALVVGPRRQNPLHE 523
AAVRLLRHHRLAG +LAAVRQ G AVP+DGRALVVGPRRQNPLH+
Sbjct: 2 AAVRLLRHHRLAGDQLAAVRQRGVAVPEDGRALVVGPRRQNPLHD 136
Score = 57.4 bits (119), Expect(2) = 1e-032
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = -1 / -2
Query: 586 IAGVRHVGGDMFKSIPSGDAIFMK 515
+ GVRHVGGDMFKSIPSGDAIFMK
Sbjct: 275 VTGVRHVGGDMFKSIPSGDAIFMK 204
Score = 56.5 bits (117), Expect(2) = 2e-029
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +3 / +1
Query: 516 FMKMASPEGMDLNISPPTCLTP 581
FMKMASPEGMDLN+SPPTCLTP
Sbjct: 205 FMKMASPEGMDLNMSPPTCLTP 270
>gb|BE355903.1|BE355903 DG1_11_E02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 679
Score = 137 bits (294), Expect = 2e-031
Identities = 59/140 (42%), Positives = 84/140 (60%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP V+A AP I GV HVGG+MF ++P GDAI +KW+L W D +C IL+NC AA
Sbjct: 31 GINYDLPRVIAQAPPIEGVEHVGGNMFDNVPRGDAIILKWILHDWGDKDCVKILKNCYAA 210
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVMTPYRTQGRERSEEEFRHLGVDAAGF 272
LP G ++ E ++PE + + ++ D +M Y +G+ER+E+E L +A
Sbjct: 211 LPVNGTMIILEYILPETPEETLTSQLAFNFDFGMMLMYGAKGKERTEKELSELAREAGFS 390
Query: 271 TAFRAIYLDPFYAVLEYTK* 212
A Y+ LE+TK*
Sbjct: 391 GDCTATYIFASIWALEFTK* 450
>gb|CF432952.1|CF432952 NIT1_20_F06.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_20_F06_A002 3', mRNA sequence
Length = 658
Score = 137 bits (294), Expect = 2e-031
Identities = 59/140 (42%), Positives = 84/140 (60%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP V+A AP I GV HVGG+MF ++P GDAI +KW+L W D +C IL+NC AA
Sbjct: 30 GINYDLPRVIAQAPPIEGVEHVGGNMFDNVPRGDAIILKWILHDWGDKDCVKILKNCYAA 209
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVMTPYRTQGRERSEEEFRHLGVDAAGF 272
LP G ++ E ++PE + + ++ D +M Y +G+ER+E+E L +A
Sbjct: 210 LPVNGTMIILEYILPETPEETLTSQLAFNFDFGMMLMYGAKGKERTEKELSELAREAGFS 389
Query: 271 TAFRAIYLDPFYAVLEYTK* 212
A Y+ LE+TK*
Sbjct: 390 GDCTATYIFASIWALEFTK* 449
>gb|BE364058.1|BE364058 PI1_11_D01.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 551
Score = 123 bits (264), Expect(2) = 3e-031
Identities = 48/106 (45%), Positives = 69/106 (65%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP V+A AP I GV HVGG+MF ++P GDAI +KW+L W D +C IL+NC AA
Sbjct: 232 GINYDLPRVIAQAPPIEGVEHVGGNMFDNVPRGDAIILKWILHDWGDKDCVKILKNCYAA 411
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVMTPYRTQGRERS 314
LP G ++ E ++PE + + ++ D +M Y +G+ER+
Sbjct: 412 LPVNGTMIILEYILPETPEETLTSQLAFNFDFGMMLMYGAKGKERT 549
Score = 32.7 bits (65), Expect(2) = 3e-031
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1 / +1
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF + LVDVGG+ G L+MI + I+
Sbjct: 142 GFENYSVLVDVGGNKGTTLQMIRSQYENIS 231
>gb|CX612696.1|CX612696 GABR1_4_A05.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_4_A05_A002 3', mRNA sequence
Length = 708
Score = 108 bits (231), Expect(3) = 4e-030
Identities = 42/98 (42%), Positives = 61/98 (62%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP V+A A + GV HVGG MF +IP G+A+ +KW+L W D C IL+NC A
Sbjct: 84 GINYDLPHVIAQAAPVEGVEHVGGSMFDNIPRGNAVLLKWILHDWDDKACIKILKNCYTA 263
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVMTPY 338
L GK++ E VVP+E + + + E D+ ++ +
Sbjct: 264 LHVRGKVIVLEYVVPDEPEPTLAAQGAFELDLTMLVTF 377
Score = 33.6 bits (67), Expect(3) = 4e-030
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -1 / +3
Query: 328 GRERSEEEFRHLGVDAAGFTAFRAIYLDPFYAVLEYTK* 212
G+ER++ EF L ++A F+A Y+ LE+TK*
Sbjct: 384 GKERTQREFSELAMEAGFSREFKATYIFANVWALEFTK* 500
Score = 28.6 bits (56), Expect(3) = 4e-030
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1 / +3
Query: 715 GVATLVDVGGSSGACLEMI 659
G+ LVDVGG +G L+MI
Sbjct: 3 GLDVLVDVGGGNGTTLQMI 59
>gb|BM328498.1|BM328498 PIC1_29_H11.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 647
Score = 108 bits (231), Expect(3) = 2e-029
Identities = 42/98 (42%), Positives = 61/98 (62%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP V+A A + GV HVGG MF +IP G+A+ +KW+L W D C IL+NC A
Sbjct: 72 GINYDLPHVIAQAAPVEGVEHVGGSMFDNIPRGNAVLLKWILHDWDDKACIKILKNCYTA 251
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVMTPY 338
L GK++ E VVP+E + + + E D+ ++ +
Sbjct: 252 LHVRGKVIVLEYVVPDEPEPTLAAQGAFELDLTMLVTF 365
Score = 33.6 bits (67), Expect(3) = 2e-029
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -1 / +3
Query: 328 GRERSEEEFRHLGVDAAGFTAFRAIYLDPFYAVLEYTK* 212
G+ER++ EF L ++A F+A Y+ LE+TK*
Sbjct: 372 GKERTQREFSELAMEAGFSREFKATYIFANVWALEFTK* 488
Score = 26.3 bits (51), Expect(3) = 2e-029
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1 / +3
Query: 703 LVDVGGSSGACLEMI 659
LVDVGG +G L+MI
Sbjct: 3 LVDVGGGNGTTLQMI 47
>gb|AY217766.1| Sorghum bicolor caffeic acid O-methyltransferase gene, complete cds
Length = 3312
Score = 110 bits (234), Expect(3) = 9e-028
Identities = 40/65 (61%), Positives = 50/65 (76%)
Frame = -1 / +2
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFDLP V++ AP GV+HVGGDMFKS+P+GDAI MKW+L W+D C +L+NC A
Sbjct: 2363 GINFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDA 2542
Query: 451 LPDGG 437
LP+ G
Sbjct: 2543 LPEKG 2557
Score = 27.6 bits (54), Expect(3) = 9e-028
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / +2
Query: 712 VATLVDVGGSSGACLEMI 659
V+TLVDVGG GA L I
Sbjct: 2285 VSTLVDVGGGIGATLHAI 2338
Score = 24.9 bits (48), Expect(3) = 9e-028
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1 / +2
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M + GRER E EFR L
Sbjct: 2642 IMLAHNPGGRERYEREFRDL 2701
>gb|AF387790.1|AF387790 Sorghum bicolor O-methyltransferase mRNA, complete cds
Length = 1458
Score = 109 bits (233), Expect(3) = 1e-027
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = -1 / +2
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
G+NFDLP V++ AP GV+HVGGDMFKS+P+GDAI MKW+L W+D C +L+NC A
Sbjct: 782 GVNFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDA 961
Query: 451 LPDGG 437
LP+ G
Sbjct: 962 LPEKG 976
Score = 27.6 bits (54), Expect(3) = 1e-027
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / +2
Query: 712 VATLVDVGGSSGACLEMI 659
V+TLVDVGG GA L I
Sbjct: 704 VSTLVDVGGGIGATLHAI 757
Score = 24.9 bits (48), Expect(3) = 1e-027
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1 / +2
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M + GRER E EFR L
Sbjct: 1061 IMLAHNPGGRERYEREFRDL 1120
>gb|CW024899.1|CW024899 104_226_10487844_116_30523 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10487844, DNA
sequence
Length = 706
Score = 109 bits (233), Expect(3) = 1e-027
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = -1 / +2
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
G+NFDLP V++ AP GV+HVGGDMFKS+P+GDAI MKW+L W+D C +L+NC A
Sbjct: 134 GVNFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDA 313
Query: 451 LPDGG 437
LP+ G
Sbjct: 314 LPEKG 328
Score = 27.6 bits (54), Expect(3) = 1e-027
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / +2
Query: 712 VATLVDVGGSSGACLEMI 659
V+TLVDVGG GA L I
Sbjct: 56 VSTLVDVGGGIGATLHAI 109
Score = 24.9 bits (48), Expect(3) = 1e-027
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1 / +2
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M + GRER E EFR L
Sbjct: 413 IMLAHNPGGRERYEREFRDL 472
>gb|BE601309.1|BE601309 PI1_91_D08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 589
Score = 108 bits (231), Expect(2) = 6e-027
Identities = 42/98 (42%), Positives = 61/98 (62%)
Frame = -1 / +2
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP V+A A + GV HVGG MF +IP G+A+ +KW+L W D C IL+NC A
Sbjct: 44 GINYDLPHVIAQAAPVEGVEHVGGSMFDNIPRGNAVLLKWILHDWDDKACIKILKNCYTA 223
Query: 451 LPDGGKLVACEPVVPEETDSSPGTRALLENDIFVMTPY 338
L GK++ E VVP+E + + + E D+ ++ +
Sbjct: 224 LHVRGKVIVLEYVVPDEPEPTLAAQGAFELDLTMLVTF 337
Score = 33.6 bits (67), Expect(2) = 6e-027
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -1 / +2
Query: 328 GRERSEEEFRHLGVDAAGFTAFRAIYLDPFYAVLEYTK* 212
G+ER++ EF L ++A F+A Y+ LE+TK*
Sbjct: 344 GKERTQREFSELAMEAGFSREFKATYIFANVWALEFTK* 460
>gb|BE598596.1|BE598596 PI1_84_F02.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 589
Score = 122 bits (260), Expect = 9e-027
Identities = 53/132 (40%), Positives = 77/132 (58%)
Frame = -1 / +1
Query: 607 VVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAALPDGGKLV 428
V+A AP I GV HVGG+MF ++P GDAI +KW+L W D +C IL+NC AALP G ++
Sbjct: 4 VIAQAPPIEGVEHVGGNMFDNVPRGDAIILKWILHDWGDKDCVKILKNCYAALPVNGTMI 183
Query: 427 ACEPVVPEETDSSPGTRALLENDIFVMTPYRTQGRERSEEEFRHLGVDAAGFTAFRAIYL 248
E ++PE + + ++ D +M Y +G+ER+E+E L +A A Y+
Sbjct: 184 ILEYILPETPEETLTSQLAFNFDFGMMLMYGAKGKERTEKELSELAREAGFSGDCTATYI 363
Query: 247 DPFYAVLEYTK* 212
LE+TK*
Sbjct: 364 FASIWALEFTK* 399
>gb|CF675653.1|CF675653 MT Subtractive cDNA library from sorghum infested by greenbug
aphids Sorghum bicolor cDNA clone MT similar to
Methyltransferase, mRNA sequence
Length = 474
Score = 106 bits (227), Expect(2) = 4e-026
Identities = 40/71 (56%), Positives = 51/71 (71%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GIN+DLP V+A AP I GV HVGG+MF ++P GDAI +KW+L W D +C IL+NC AA
Sbjct: 261 GINYDLPRVIAQAPPIEGVEHVGGNMFDNVPRGDAIILKWILHDWGDKDCVKILKNCYAA 440
Query: 451 LPDGGKLVACE 419
LP G ++ E
Sbjct: 441 LPVNGTMIILE 473
Score = 32.7 bits (65), Expect(2) = 4e-026
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1 / +3
Query: 724 GFRGVATLVDVGGSSGACLEMIMRRVPTIT 635
GF + LVDVGG+ G L+MI + I+
Sbjct: 171 GFENYSVLVDVGGNKGTTLQMIRSQYENIS 260
>gb|CN128071.1|CN128071 RHOH1_26_G08.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_26_G08_A002 5', mRNA sequence
Length = 781
Score = 109 bits (233), Expect(2) = 2e-025
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = -1 / +2
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
G+NFDLP V++ AP GV+HVGGDMFKS+P+GDAI MKW+L W+D C +L+NC A
Sbjct: 467 GVNFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDA 646
Query: 451 LPDGG 437
LP+ G
Sbjct: 647 LPEKG 661
Score = 27.6 bits (54), Expect(2) = 2e-025
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / +2
Query: 712 VATLVDVGGSSGACLEMI 659
V+TLVDVGG GA L I
Sbjct: 389 VSTLVDVGGGIGATLHAI 442
>gb|AW670995.1|AW670995 LG1_278_E11.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 472
Score = 109 bits (233), Expect(2) = 2e-025
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
G+NFDLP V++ AP GV+HVGGDMFKS+P+GDAI MKW+L W+D C +L+NC A
Sbjct: 223 GVNFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDA 402
Query: 451 LPDGG 437
LP+ G
Sbjct: 403 LPEKG 417
Score = 27.6 bits (54), Expect(2) = 2e-025
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / +1
Query: 712 VATLVDVGGSSGACLEMI 659
V+TLVDVGG GA L I
Sbjct: 145 VSTLVDVGGGIGATLHAI 198
>gb|AW670997.1|AW670997 LG1_278_H02.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 436
Score = 109 bits (233), Expect(2) = 2e-025
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
G+NFDLP V++ AP GV+HVGGDMFKS+P+GDAI MKW+L W+D C +L+NC A
Sbjct: 129 GVNFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDA 308
Query: 451 LPDGG 437
LP+ G
Sbjct: 309 LPEKG 323
Score = 27.6 bits (54), Expect(2) = 2e-025
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / +3
Query: 712 VATLVDVGGSSGACLEMI 659
V+TLVDVGG GA L I
Sbjct: 51 VSTLVDVGGGIGATLHAI 104
>gb|BG050885.1|BG050885 FM1_72_B12.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 286
Score = 108 bits (230), Expect(2) = 4e-025
Identities = 39/63 (61%), Positives = 49/63 (77%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
GINFDLP V++ AP GV+HVGGDMFKS+P+GDAI MKW+L W+D C +L+NC A
Sbjct: 96 GINFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDA 275
Query: 451 LPD 443
LP+
Sbjct: 276 LPE 284
Score = 27.6 bits (54), Expect(2) = 4e-025
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / +3
Query: 712 VATLVDVGGSSGACLEMI 659
V+TLVDVGG GA L I
Sbjct: 18 VSTLVDVGGGIGATLHAI 71
>gb|BI098834.1|BI098834 IP1_33_G12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 391
Score = 107 bits (229), Expect(2) = 6e-025
Identities = 38/63 (60%), Positives = 49/63 (77%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
G+NFDLP V++ AP GV+HVGGDMFKS+P+GDAI MKW+L W+D C +L+NC A
Sbjct: 199 GVNFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDA 378
Query: 451 LPD 443
LP+
Sbjct: 379 LPE 387
Score = 27.6 bits (54), Expect(2) = 6e-025
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / +1
Query: 712 VATLVDVGGSSGACLEMI 659
V+TLVDVGG GA L I
Sbjct: 121 VSTLVDVGGGIGATLHAI 174
>gb|CN127290.1|CN127290 RHOH1_22_D08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_22_D08_A002 3', mRNA sequence
Length = 796
Score = 109 bits (233), Expect(2) = 1e-024
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
G+NFDLP V++ AP GV+HVGGDMFKS+P+GDAI MKW+L W+D C +L+NC A
Sbjct: 12 GVNFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDA 191
Query: 451 LPDGG 437
LP+ G
Sbjct: 192 LPEKG 206
Score = 24.9 bits (48), Expect(2) = 1e-024
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1 / +3
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M + GRER E EFR L
Sbjct: 291 IMLAHNPGGRERYEREFRDL 350
>gb|CN127992.1|CN127992 RHOH1_26_G08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_26_G08_A002 3', mRNA sequence
Length = 766
Score = 109 bits (233), Expect(2) = 1e-024
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = -1 / +3
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
G+NFDLP V++ AP GV+HVGGDMFKS+P+GDAI MKW+L W+D C +L+NC A
Sbjct: 12 GVNFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDA 191
Query: 451 LPDGG 437
LP+ G
Sbjct: 192 LPEKG 206
Score = 24.9 bits (48), Expect(2) = 1e-024
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1 / +3
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M + GRER E EFR L
Sbjct: 291 IMLAHNPGGRERYEREFRDL 350
>gb|CN131323.1|CN131323 RHOH1_47_F05.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_47_F05_A002 3', mRNA sequence
Length = 702
Score = 109 bits (233), Expect(2) = 1e-024
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
G+NFDLP V++ AP GV+HVGGDMFKS+P+GDAI MKW+L W+D C +L+NC A
Sbjct: 22 GVNFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDA 201
Query: 451 LPDGG 437
LP+ G
Sbjct: 202 LPEKG 216
Score = 24.9 bits (48), Expect(2) = 1e-024
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1 / +1
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M + GRER E EFR L
Sbjct: 301 IMLAHNPGGRERYEREFRDL 360
>gb|CN129737.1|CN129737 RHOH1_37_D01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_37_D01_A002 3', mRNA sequence
Length = 648
Score = 109 bits (233), Expect(2) = 1e-024
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = -1 / +2
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
G+NFDLP V++ AP GV+HVGGDMFKS+P+GDAI MKW+L W+D C +L+NC A
Sbjct: 14 GVNFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDA 193
Query: 451 LPDGG 437
LP+ G
Sbjct: 194 LPEKG 208
Score = 24.9 bits (48), Expect(2) = 1e-024
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1 / +2
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M + GRER E EFR L
Sbjct: 293 IMLAHNPGGRERYEREFRDL 352
>gb|BE361873.1|BE361873 DG1_82_G04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 660
Score = 107 bits (229), Expect(2) = 4e-024
Identities = 38/63 (60%), Positives = 49/63 (77%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAA 452
G+NFDLP V++ AP GV+HVGGDMFKS+P+GDAI MKW+L W+D C +L+NC A
Sbjct: 16 GVNFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDA 195
Query: 451 LPD 443
LP+
Sbjct: 196 LPE 204
Score = 24.9 bits (48), Expect(2) = 4e-024
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1 / +1
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M + GRER E EFR L
Sbjct: 295 IMLAHNPGGRERYEREFRDL 354
>gb|CX610824.1|CX610824 ANR1_21_B08.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_21_B08_A002 3', mRNA sequence
Length = 780
Score = 105 bits (224), Expect(2) = 2e-023
Identities = 38/63 (60%), Positives = 48/63 (76%)
Frame = -1 / +2
Query: 625 NFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAALP 446
NFDLP V++ AP GV+HVGGDMFKS+P+GDAI MKW+L W+D C +L+NC ALP
Sbjct: 2 NFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALP 181
Query: 445 DGG 437
+ G
Sbjct: 182 EKG 190
Score = 24.9 bits (48), Expect(2) = 2e-023
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1 / +2
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M + GRER E EFR L
Sbjct: 275 IMLAHNPGGRERYEREFRDL 334
>gb|CN131393.1|CN131393 RHOH1_47_F05.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_47_F05_A002 5', mRNA sequence
Length = 550
Score = 97.7 bits (207), Expect(2) = 6e-022
Identities = 34/56 (60%), Positives = 44/56 (78%)
Frame = -1 / +1
Query: 631 GINFDLPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRN 464
G+NFDLP V++ AP GV+HVGGDMFKS+P+GDAI MKW+L W+D C +L+N
Sbjct: 382 GVNFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHYWSDAHCATLLKN 549
Score = 27.6 bits (54), Expect(2) = 6e-022
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / +1
Query: 712 VATLVDVGGSSGACLEMI 659
V+TLVDVGG GA L I
Sbjct: 304 VSTLVDVGGGIGATLHAI 357
>gb|BM329106.1|BM329106 PIC1_33_E02.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 596
Score = 89.5 bits (189), Expect(2) = 3e-021
Identities = 35/88 (39%), Positives = 52/88 (59%)
Frame = -1 / +2
Query: 601 AAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAALPDGGKLVAC 422
A A + GV HVGG MF +IP G+A+ +KW+L W D C IL+NC AL GK++
Sbjct: 2 AQAAPVEGVEHVGGSMFDNIPRGNAVLLKWILHDWDDKACIKILKNCYTALHVRGKVIVL 181
Query: 421 EPVVPEETDSSPGTRALLENDIFVMTPY 338
E VVP+E + + + E D+ ++ +
Sbjct: 182 EYVVPDEPEPTLAAQGAFELDLTMLVTF 265
Score = 33.6 bits (67), Expect(2) = 3e-021
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -1 / +2
Query: 328 GRERSEEEFRHLGVDAAGFTAFRAIYLDPFYAVLEYTK* 212
G+ER++ EF L ++A F+A Y+ LE+TK*
Sbjct: 272 GKERTQREFSELAMEAGFSREFKATYIFANVWALEFTK* 388
>gb|BE359069.1|BE359069 DG1_38_E03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 491
Score = 97.3 bits (206), Expect(2) = 5e-021
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = -1 / +3
Query: 616 LPDVVAAAPSIAGVRHVGGDMFKSIPSGDAIFMKWVLTTWTDDECPAILRNCPAALPDGG 437
LP V++ AP GV+HVGGDMFKS+P+GDAI MKW+L W+D C +L+NC ALP+ G
Sbjct: 3 LPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPEKG 182
Score = 24.9 bits (48), Expect(2) = 5e-021
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1 / +3
Query: 352 VMTPYRTQGRERSEEEFRHL 293
+M + GRER E EFR L
Sbjct: 267 IMLAHNPGGRERYEREFRDL 326
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 822,035,947
Number of Sequences: 832831
Number of extensions: 11737843
Number of successful extensions: 148879
Number of sequences better than 1.0e-020: 43
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 24594432174
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)