TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3183567.2.1
(681 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX607501.1|CX607501 ANR1_29_C07.b1_A002 Anaerobic roots ... 299 2e-099
gb|CX606849.1|CX606849 ANR1_5_G02.b1_A002 Anaerobic roots S... 297 7e-099
gb|CX618204.1|CX618204 GABR1_38_F09.b1_A002 GA- or brassino... 290 1e-097
gb|CD429899.1|CD429899 ETH1_16_D12.b1_A002 Ethylene-treated... 281 9e-091
gb|CD432801.1|CD432801 ETH1_33_E10.b1_A002 Ethylene-treated... 274 1e-090
gb|CW184174.1|CW184174 104_600_11165012_116_36684_074 Sorgh... 235 6e-061
gb|BG159414.1|BG159414 OV2_7_E10.g1_A002 Ovary 2 (OV2) Sorg... 192 9e-054
gb|BG273230.1|BG273230 OV2_28_E07.g1_A002 Ovary 2 (OV2) Sor... 199 5e-050
gb|CW175039.1|CW175039 104_587_11157726_116_36573_025 Sorgh... 173 2e-042
gb|CW213874.1|CW213874 104_645_11191795_116_37034_070 Sorgh... 158 2e-037
gb|CN132569.1|CN132569 OX1_7_A07.b1_A002 Oxidatively-stress... 154 2e-036
gb|CX619978.1|CX619978 GABR1_49_C08.b1_A002 GA- or brassino... 116 4e-031
gb|CW336755.1|CW336755 104_836_11483769_148_36106_043 Sorgh... 135 5e-031
gb|BI074334.1|BI074334 IP1_14_F11.g1_A002 Immature pannicle... 59 1e-030
>gb|CX607501.1|CX607501 ANR1_29_C07.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_29_C07_A002 3', mRNA sequence
Length = 797
Score = 299 bits (647), Expect(5) = 1e-092
Identities = 124/136 (91%), Positives = 127/136 (93%)
Frame = +1 / -1
Query: 268 *LPDCCCFWSSVGLEGLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQI 447
*LPDCCCFWSSVGLEGLNG+CSAQSRLSPECSRPTPMRSR*YW* EIITFM ST PLPQI
Sbjct: 500 *LPDCCCFWSSVGLEGLNGSCSAQSRLSPECSRPTPMRSR*YW**EIITFMESTNPLPQI 321
Query: 448 DSP*SMFMVAPNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCS 627
DSP*SMFMVAPNPGRRLLSVSF VGFQ+PT ASCADGWLFLIGVIHRHIAAMNA+VAFCS
Sbjct: 320 DSP*SMFMVAPNPGRRLLSVSFFVGFQVPTNASCADGWLFLIGVIHRHIAAMNANVAFCS 141
Query: 628 RYSGXXSRSALIPPPA 675
RYSG SRS LIP PA
Sbjct: 140 RYSGWWSRSTLIPSPA 93
Score = 293 bits (634), Expect(7) = 2e-099
Identities = 116/125 (92%), Positives = 119/125 (95%)
Frame = -2 / +1
Query: 674 AGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSK 495
AG GIK DLL PEYLEQNATLAFMAAMWRWMTPIKKSQPSAH+AFVG WKPTKNDTLSK
Sbjct: 94 AGDGIKVDLLHHPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHEAFVGTWKPTKNDTLSK 273
Query: 494 RLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFN 315
RLPGFGATMNILYGESICGKG+VD+MNVIISHYQYYLDLMGVGREHSGDNRDCAEQ PFN
Sbjct: 274 RLPGFGATMNILYGESICGKGFVDSMNVIISHYQYYLDLMGVGREHSGDNRDCAEQLPFN 453
Query: 314 PSSPT 300
PSSPT
Sbjct: 454 PSSPT 468
Score = 258 bits (558), Expect(5) = 1e-080
Identities = 110/142 (77%), Positives = 121/142 (85%)
Frame = -1 / +3
Query: 672 RWRDQGGSAPPPRVPGAERDAGIHGGDVAVDDADQEEPAVGARRLRGQLEAHQERHAQQT 493
R RDQGG APPPRVP AE D GIHGG+VAVDD DQEEPAV AR + G LEAH+ER+AQQT
Sbjct: 96 R*RDQGGPAPPPRVPRAECDVGIHGGNVAVDDTDQEEPAVSARSVCGHLEAHKERYAQQT 275
Query: 492 PAWVRRHHEHTLRRVDLRQGIRRRHERYNLALPVLP*PHGRRP*ALWRQP*LRRAGTVQP 313
PAWVRRHHEHTL R+DL QGIR HE YNL+LPVLP*PHGR P*ALWRQP*L A VQP
Sbjct: 276 PAWVRRHHEHTLWRIDLWQGIR*LHECYNLSLPVLP*PHGRWP*ALWRQP*LC*AAPVQP 455
Query: 312 LQPDG*PEAAAIRKLRRTHCAI 247
L+P+G*PEAAAIRKL++T CA+
Sbjct: 456 LKPNG*PEAAAIRKLKQTRCAM 521
Score = 155 bits (332), Expect(5) = 1e-050
Identities = 72/98 (73%), Positives = 79/98 (80%)
Frame = +3 / -3
Query: 255 NESVLASXXXXXXVIRRAGGVERCLLGAITVVARVLTADAHEVKVILVVRDYNVHGVDVS 434
N SVLAS VIR A GVER LL ITVVARVLTA+AHEVKVILVVRDYN+HGV+ S
Sbjct: 513 NGSVLAS*LLLLLVIRWA*GVERELLSTITVVARVLTANAHEVKVILVVRDYNIHGVNES 334
Query: 435 LAADRLAVEYVHGGAEPRQAFAERVVLGGLPVAHEGVV 548
LA DR ++EYVHGGAEPRQAFAER+VL GLP AH+ V
Sbjct: 333 LATDRFSIEYVHGGAEPRQAFAERIVLCGLPGAHKRFV 220
Score = 89.0 bits (188), Expect(5) = 5e-028
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = +2 / -2
Query: 269 SFLIAAASGHPSGWRG*TVPARRNHGCRQSAHGRRP*GQGNTGS 400
SFLIAAASGHP G RG*T A+ NHGCRQSAHG+RP*GQGNTGS
Sbjct: 499 SFLIAAASGHPLGLRG*TGAAQHNHGCRQSAHGQRP*GQGNTGS 368
Score = 72.1 bits (151), Expect(5) = 6e-025
Identities = 33/41 (80%), Positives = 34/41 (82%)
Frame = -3 / +2
Query: 376 WASAVSTLATTVIAPSRHRSTPPARRMTRSSSNQEAKTDSL 254
WA AVSTLATTVI S RSTP A+RMTRSSSNQEAKTD L
Sbjct: 392 WALAVSTLATTVIVLSSSRSTPQAQRMTRSSSNQEAKTDPL 514
Score = 40.9 bits (83), Expect(7) = 2e-099
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 87 SLFWFLWFCQIRYTY 43
SLFWFLWFCQ+ YT+
Sbjct: 713 SLFWFLWFCQVHYTH 757
Score = 40.0 bits (81), Expect(5) = 6e-025
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3 / +2
Query: 535 WATGSPPRTTRSANACLG 482
WA GSP RT RSANACLG
Sbjct: 233 WAPGSPQRTIRSANACLG 286
Score = 35.4 bits (71), Expect(7) = 2e-099
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1 / +2
Query: 153 TVCTVYVNCEICGY 112
TVCTVY NCE+CG+
Sbjct: 650 TVCTVYGNCEVCGH 691
Score = 35.0 bits (70), Expect(5) = 5e-028
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2 / -2
Query: 482 TQAGVC*ACRSWWASSC 532
TQAGVC*A RS WAS C
Sbjct: 286 TQAGVC*AYRSLWASRC 236
Score = 34.5 bits (69), Expect(5) = 1e-092
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3 / -1
Query: 111 NNHKSRNSHRQYIQSIQNNINT 176
N+HK NSHRQYIQS T
Sbjct: 692 NDHKPHNSHRQYIQSCDQPFKT 627
Score = 34.1 bits (68), Expect(5) = 1e-050
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +2 / -2
Query: 629 GTLGGGADPP*SRH 670
GTLGGGA PP*SRH
Sbjct: 139 GTLGGGAGPP*SRH 98
Score = 33.1 bits (66), Expect(7) = 2e-099
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3 / +1
Query: 46 LYTCLKRTEHTKNLF 2
LYTCLKR EHT+ LF
Sbjct: 748 LYTCLKRIEHTRALF 792
Score = 33.1 bits (66), Expect(5) = 1e-080
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -2 / +3
Query: 83 CFGFFGSVRYVI 48
CFGFFGSVRY+I
Sbjct: 717 CFGFFGSVRYII 752
Score = 33.1 bits (66), Expect(5) = 1e-092
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / -1
Query: 3 KRFLVCSVLFKHVY 44
KR LVCS+LFKHVY
Sbjct: 791 KRALVCSILFKHVY 750
Score = 32.7 bits (65), Expect(5) = 1e-080
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -2 / +3
Query: 47 LIHMFKEN*TYQKPF 3
+IHMFKE+*TYQ PF
Sbjct: 747 IIHMFKED*TYQGPF 791
Score = 32.2 bits (64), Expect(5) = 1e-050
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1 / -2
Query: 4 KGFWYVQFSLNMCI 45
KG WYVQ SLNMCI
Sbjct: 790 KGPWYVQSSLNMCI 749
Score = 31.8 bits (63), Expect(5) = 1e-092
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -2
Query: 49 ITYLTEPKKPKQT 87
I YLTEPKKPKQT
Sbjct: 751 IMYLTEPKKPKQT 713
Score = 29.9 bits (59), Expect(5) = 5e-028
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3 / -3
Query: 618 VLLQVLWXXEQIRLDPAT 671
+LL VLW EQ+ LDP T
Sbjct: 150 ILL*VLWVVEQVHLDPVT 97
Score = 29.5 bits (58), Expect(5) = 1e-050
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3 / -1
Query: 48 YNVSDRTKETKTD 86
YNV DRTKETKT+
Sbjct: 752 YNVPDRTKETKTN 714
Score = 29.0 bits (57), Expect(5) = 1e-080
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3 / +1
Query: 154 DCMYCLCELRDLW 116
DCMYCL EL LW
Sbjct: 649 DCMYCLWEL*GLW 687
Score = 27.2 bits (53), Expect(5) = 1e-050
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2 / -3
Query: 113 *PQISQFT*TVHTV 154
*PQ SQF *TVHTV
Sbjct: 690 *PQTSQFP*TVHTV 649
Score = 26.7 bits (52), Expect(5) = 6e-025
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 45 YTHV*RELNIPKTF 4
YTHV*R LNIP F
Sbjct: 749 YTHV*RGLNIPGPF 790
Score = 26.3 bits (51), Expect(7) = 2e-099
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1 / +1
Query: 225 ALD*ATDSSGCVKLH 181
AL+*ATDSS VKLH
Sbjct: 571 ALN*ATDSSESVKLH 615
Score = 24.9 bits (48), Expect(7) = 2e-099
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1 / +3
Query: 111 LLPCCP*ISLFWF 73
++PCCP*I F F
Sbjct: 690 IIPCCP*IVCFGF 728
Score = 24.4 bits (47), Expect(5) = 6e-025
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / +3
Query: 164 VLNRLYVLSM*IARF 120
++ RLYVLSM I RF
Sbjct: 639 LITRLYVLSMGIVRF 683
Score = 24.4 bits (47), Expect(5) = 5e-028
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1 / -1
Query: 133 HIDSTYSLFKTTSTRC 180
+I S FKTTSTRC
Sbjct: 659 YIQSCDQPFKTTSTRC 612
Score = 23.5 bits (45), Expect(5) = 6e-025
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2 / +2
Query: 227 QR*IELQILQDA*SCM 180
Q *IEL ILQ+ *SC+
Sbjct: 569 QH*IELLILQNL*SCI 616
Score = 23.5 bits (45), Expect(5) = 1e-080
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3 / +3
Query: 226 SARLSYRFFRMREAA 182
S +LSY FFR+ EAA
Sbjct: 570 STKLSY*FFRICEAA 614
Score = 22.6 bits (43), Expect(7) = 2e-099
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / +1
Query: 182 MHRVDVVLN 156
+HRVDVVLN
Sbjct: 610 LHRVDVVLN 636
Score = 21.7 bits (41), Expect(5) = 1e-092
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / -3
Query: 181 MQLHAS*RICSSI* 222
MQLH *RI SSI*
Sbjct: 615 MQLHRF*RISSSI* 574
Score = 21.7 bits (41), Expect(5) = 5e-028
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / -3
Query: 14 GMFSSL*TCV* 46
GMF+ L*TCV*
Sbjct: 780 GMFNPL*TCV* 748
>gb|CX606849.1|CX606849 ANR1_5_G02.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_5_G02_A002 3', mRNA sequence
Length = 777
Score = 297 bits (642), Expect(5) = 5e-092
Identities = 124/143 (86%), Positives = 128/143 (89%)
Frame = +1 / -2
Query: 247 NGAMSPS*LPDCCCFWSSVGLEGLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMAS 426
+ M *LPDCCCFWSSVGLEGLNG+CSAQSRLSPECSRPTPMRSR*YW* EIITFM S
Sbjct: 455 HSTMGLF*LPDCCCFWSSVGLEGLNGSCSAQSRLSPECSRPTPMRSR*YW**EIITFMES 276
Query: 427 TYPLPQIDSP*SMFMVAPNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMN 606
T PLPQIDSP*SMFMVAPNPGRRLLSVSF VGFQ+PT ASCADGWLFLIGVIHRHIAAMN
Sbjct: 275 TNPLPQIDSP*SMFMVAPNPGRRLLSVSFFVGFQVPTNASCADGWLFLIGVIHRHIAAMN 96
Query: 607 ASVAFCSRYSGXXSRSALIPPPA 675
A+VAFCSRYSG S S LIP PA
Sbjct: 95 ANVAFCSRYSGWWSXSTLIPSPA 27
Score = 291 bits (629), Expect(7) = 7e-099
Identities = 115/125 (92%), Positives = 118/125 (94%)
Frame = -2 / +1
Query: 674 AGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSK 495
AG GIK D L PEYLEQNATLAFMAAMWRWMTPIKKSQPSAH+AFVG WKPTKNDTLSK
Sbjct: 28 AGDGIKVDXLHHPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHEAFVGTWKPTKNDTLSK 207
Query: 494 RLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFN 315
RLPGFGATMNILYGESICGKG+VD+MNVIISHYQYYLDLMGVGREHSGDNRDCAEQ PFN
Sbjct: 208 RLPGFGATMNILYGESICGKGFVDSMNVIISHYQYYLDLMGVGREHSGDNRDCAEQLPFN 387
Query: 314 PSSPT 300
PSSPT
Sbjct: 388 PSSPT 402
Score = 262 bits (567), Expect(5) = 9e-082
Identities = 111/142 (78%), Positives = 122/142 (85%)
Frame = -1 / +3
Query: 672 RWRDQGGSAPPPRVPGAERDAGIHGGDVAVDDADQEEPAVGARRLRGQLEAHQERHAQQT 493
R RDQGG APPPRVP AE D GIHGG+VAVDD DQEEPAV AR + G LEAH+ER+AQQT
Sbjct: 30 R*RDQGGXAPPPRVPRAECDVGIHGGNVAVDDTDQEEPAVSARSVCGHLEAHKERYAQQT 209
Query: 492 PAWVRRHHEHTLRRVDLRQGIRRRHERYNLALPVLP*PHGRRP*ALWRQP*LRRAGTVQP 313
PAWVRRHHEHTL R+DL QGIR HE YNL+LPVLP*PHGR P*ALWRQP*L A VQP
Sbjct: 210 PAWVRRHHEHTLWRIDLWQGIR*LHECYNLSLPVLP*PHGRWP*ALWRQP*LC*AAPVQP 389
Query: 312 LQPDG*PEAAAIRKLRRTHCAI 247
L+P+G*PEAAAIRKL++THCA+
Sbjct: 390 LKPNG*PEAAAIRKLKQTHCAM 455
Score = 155 bits (332), Expect(5) = 1e-050
Identities = 72/98 (73%), Positives = 79/98 (80%)
Frame = +3 / -1
Query: 255 NESVLASXXXXXXVIRRAGGVERCLLGAITVVARVLTADAHEVKVILVVRDYNVHGVDVS 434
N SVLAS VIR A GVER LL ITVVARVLTA+AHEVKVILVVRDYN+HGV+ S
Sbjct: 447 NGSVLAS*LLLLLVIRWA*GVERELLSTITVVARVLTANAHEVKVILVVRDYNIHGVNES 268
Query: 435 LAADRLAVEYVHGGAEPRQAFAERVVLGGLPVAHEGVV 548
LA DR ++EYVHGGAEPRQAFAER+VL GLP AH+ V
Sbjct: 267 LATDRFSIEYVHGGAEPRQAFAERIVLCGLPGAHKRFV 154
Score = 89.0 bits (188), Expect(5) = 3e-027
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = +2 / -3
Query: 269 SFLIAAASGHPSGWRG*TVPARRNHGCRQSAHGRRP*GQGNTGS 400
SFLIAAASGHP G RG*T A+ NHGCRQSAHG+RP*GQGNTGS
Sbjct: 433 SFLIAAASGHPLGLRG*TGAAQHNHGCRQSAHGQRP*GQGNTGS 302
Score = 72.1 bits (151), Expect(5) = 6e-025
Identities = 33/41 (80%), Positives = 34/41 (82%)
Frame = -3 / +2
Query: 376 WASAVSTLATTVIAPSRHRSTPPARRMTRSSSNQEAKTDSL 254
WA AVSTLATTVI S RSTP A+RMTRSSSNQEAKTD L
Sbjct: 326 WALAVSTLATTVIVLSSSRSTPQAQRMTRSSSNQEAKTDPL 448
Score = 40.9 bits (83), Expect(7) = 7e-099
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 87 SLFWFLWFCQIRYTY 43
SLFWFLWFCQ+ YT+
Sbjct: 647 SLFWFLWFCQVHYTH 691
Score = 40.0 bits (81), Expect(5) = 6e-025
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3 / +2
Query: 535 WATGSPPRTTRSANACLG 482
WA GSP RT RSANACLG
Sbjct: 167 WAPGSPQRTIRSANACLG 220
Score = 35.4 bits (71), Expect(7) = 7e-099
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1 / +2
Query: 153 TVCTVYVNCEICGY 112
TVCTVY NCE+CG+
Sbjct: 584 TVCTVYGNCEVCGH 625
Score = 35.0 bits (70), Expect(5) = 3e-027
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2 / -3
Query: 482 TQAGVC*ACRSWWASSC 532
TQAGVC*A RS WAS C
Sbjct: 220 TQAGVC*AYRSLWASRC 170
Score = 34.5 bits (69), Expect(5) = 5e-092
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3 / -2
Query: 111 NNHKSRNSHRQYIQSIQNNINT 176
N+HK NSHRQYIQS T
Sbjct: 626 NDHKPHNSHRQYIQSCDQPFKT 561
Score = 34.1 bits (68), Expect(5) = 1e-050
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +2 / -3
Query: 629 GTLGGGADPP*SRH 670
GTLGGGA PP*SRH
Sbjct: 73 GTLGGGAXPP*SRH 32
Score = 33.1 bits (66), Expect(7) = 7e-099
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3 / +1
Query: 46 LYTCLKRTEHTKNLF 2
LYTCLKR EHT+ LF
Sbjct: 682 LYTCLKRIEHTRALF 726
Score = 33.1 bits (66), Expect(5) = 9e-082
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -2 / +3
Query: 83 CFGFFGSVRYVI 48
CFGFFGSVRY+I
Sbjct: 651 CFGFFGSVRYII 686
Score = 33.1 bits (66), Expect(5) = 5e-092
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / -2
Query: 3 KRFLVCSVLFKHVY 44
KR LVCS+LFKHVY
Sbjct: 725 KRALVCSILFKHVY 684
Score = 32.7 bits (65), Expect(5) = 9e-082
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -2 / +3
Query: 47 LIHMFKEN*TYQKPF 3
+IHMFKE+*TYQ PF
Sbjct: 681 IIHMFKED*TYQGPF 725
Score = 32.2 bits (64), Expect(5) = 1e-050
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1 / -3
Query: 4 KGFWYVQFSLNMCI 45
KG WYVQ SLNMCI
Sbjct: 724 KGPWYVQSSLNMCI 683
Score = 31.8 bits (63), Expect(5) = 5e-092
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -3
Query: 49 ITYLTEPKKPKQT 87
I YLTEPKKPKQT
Sbjct: 685 IMYLTEPKKPKQT 647
Score = 29.5 bits (58), Expect(5) = 1e-050
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3 / -2
Query: 48 YNVSDRTKETKTD 86
YNV DRTKETKT+
Sbjct: 686 YNVPDRTKETKTN 648
Score = 29.0 bits (57), Expect(5) = 9e-082
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3 / +1
Query: 154 DCMYCLCELRDLW 116
DCMYCL EL LW
Sbjct: 583 DCMYCLWEL*GLW 621
Score = 27.2 bits (53), Expect(5) = 3e-027
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3 / -1
Query: 618 VLLQVLWXXEQIRLDPAT 671
+LL VLW E + LDP T
Sbjct: 84 ILL*VLWVVEXVHLDPVT 31
Score = 27.2 bits (53), Expect(5) = 1e-050
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2 / -1
Query: 113 *PQISQFT*TVHTV 154
*PQ SQF *TVHTV
Sbjct: 624 *PQTSQFP*TVHTV 583
Score = 26.7 bits (52), Expect(5) = 6e-025
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 45 YTHV*RELNIPKTF 4
YTHV*R LNIP F
Sbjct: 683 YTHV*RGLNIPGPF 724
Score = 26.3 bits (51), Expect(7) = 7e-099
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1 / +1
Query: 225 ALD*ATDSSGCVKLH 181
AL+*ATDSS VKLH
Sbjct: 505 ALN*ATDSSESVKLH 549
Score = 24.9 bits (48), Expect(7) = 7e-099
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1 / +3
Query: 111 LLPCCP*ISLFWF 73
++PCCP*I F F
Sbjct: 624 IIPCCP*IVCFGF 662
Score = 24.4 bits (47), Expect(5) = 6e-025
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / +3
Query: 164 VLNRLYVLSM*IARF 120
++ RLYVLSM I RF
Sbjct: 573 LITRLYVLSMGIVRF 617
Score = 24.4 bits (47), Expect(5) = 3e-027
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1 / -2
Query: 133 HIDSTYSLFKTTSTRC 180
+I S FKTTSTRC
Sbjct: 593 YIQSCDQPFKTTSTRC 546
Score = 23.5 bits (45), Expect(5) = 6e-025
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2 / +2
Query: 227 QR*IELQILQDA*SCM 180
Q *IEL ILQ+ *SC+
Sbjct: 503 QH*IELLILQNL*SCI 550
Score = 23.5 bits (45), Expect(5) = 9e-082
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3 / +3
Query: 226 SARLSYRFFRMREAA 182
S +LSY FFR+ EAA
Sbjct: 504 STKLSY*FFRICEAA 548
Score = 22.6 bits (43), Expect(7) = 7e-099
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / +1
Query: 182 MHRVDVVLN 156
+HRVDVVLN
Sbjct: 544 LHRVDVVLN 570
Score = 21.7 bits (41), Expect(5) = 5e-092
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / -1
Query: 181 MQLHAS*RICSSI* 222
MQLH *RI SSI*
Sbjct: 549 MQLHRF*RISSSI* 508
Score = 21.7 bits (41), Expect(5) = 3e-027
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / -1
Query: 14 GMFSSL*TCV* 46
GMF+ L*TCV*
Sbjct: 714 GMFNPL*TCV* 682
>gb|CX618204.1|CX618204 GABR1_38_F09.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_38_F09_A002 3', mRNA sequence
Length = 738
Score = 290 bits (627), Expect(5) = 4e-090
Identities = 121/138 (87%), Positives = 125/138 (90%)
Frame = +1 / -2
Query: 247 NGAMSPS*LPDCCCFWSSVGLEGLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMAS 426
+ M *LPDCCCFWSSVGLEGLNG+CSAQSRLSPECSRPTPMRSR*YW* EIITFM S
Sbjct: 416 HSTMGLF*LPDCCCFWSSVGLEGLNGSCSAQSRLSPECSRPTPMRSR*YW**EIITFMES 237
Query: 427 TYPLPQIDSP*SMFMVAPNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMN 606
T PLPQIDSP*SMFMVAPNPGRRLLSVSF VGFQ+PT ASCADGWLFLIGVIHRHIAAMN
Sbjct: 236 TNPLPQIDSP*SMFMVAPNPGRRLLSVSFFVGFQVPTNASCADGWLFLIGVIHRHIAAMN 57
Query: 607 ASVAFCSRYSGXXSRSAL 660
A+VAFCSRYSG SRS L
Sbjct: 56 ANVAFCSRYSGWWSRSTL 3
Score = 286 bits (619), Expect(7) = 1e-097
Identities = 113/121 (93%), Positives = 116/121 (95%)
Frame = -2 / +1
Query: 662 IKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPG 483
IK DLL PEYLEQNATLAFMAAMWRWMTPIKKSQPSAH+AFVG WKPTKNDTLSKRLPG
Sbjct: 1 IKVDLLHHPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHEAFVGTWKPTKNDTLSKRLPG 180
Query: 482 FGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSSP 303
FGATMNILYGESICGKG+VD+MNVIISHYQYYLDLMGVGREHSGDNRDCAEQ PFNPSSP
Sbjct: 181 FGATMNILYGESICGKGFVDSMNVIISHYQYYLDLMGVGREHSGDNRDCAEQLPFNPSSP 360
Query: 302 T 300
T
Sbjct: 361 T 363
Score = 256 bits (554), Expect(5) = 5e-080
Identities = 108/138 (78%), Positives = 119/138 (86%)
Frame = -1 / +3
Query: 660 QGGSAPPPRVPGAERDAGIHGGDVAVDDADQEEPAVGARRLRGQLEAHQERHAQQTPAWV 481
QGG APPPRVP AE D GIHGG+VAVDD DQEEPAV AR + G LEAH+ER+AQQTPAWV
Sbjct: 3 QGGPAPPPRVPRAECDVGIHGGNVAVDDTDQEEPAVSARSVCGHLEAHKERYAQQTPAWV 182
Query: 480 RRHHEHTLRRVDLRQGIRRRHERYNLALPVLP*PHGRRP*ALWRQP*LRRAGTVQPLQPD 301
RRHHEHTL R+DL QGIR HE YNL+LPVLP*PHGR P*ALWRQP*L A VQPL+P+
Sbjct: 183 RRHHEHTLWRIDLWQGIR*LHECYNLSLPVLP*PHGRWP*ALWRQP*LC*AAPVQPLKPN 362
Query: 300 G*PEAAAIRKLRRTHCAI 247
G*PEAAAIRKL++THCA+
Sbjct: 363 G*PEAAAIRKLKQTHCAM 416
Score = 155 bits (332), Expect(5) = 2e-048
Identities = 72/98 (73%), Positives = 79/98 (80%)
Frame = +3 / -1
Query: 255 NESVLASXXXXXXVIRRAGGVERCLLGAITVVARVLTADAHEVKVILVVRDYNVHGVDVS 434
N SVLAS VIR A GVER LL ITVVARVLTA+AHEVKVILVVRDYN+HGV+ S
Sbjct: 408 NGSVLAS*LLLLLVIRWA*GVERELLSTITVVARVLTANAHEVKVILVVRDYNIHGVNES 229
Query: 435 LAADRLAVEYVHGGAEPRQAFAERVVLGGLPVAHEGVV 548
LA DR ++EYVHGGAEPRQAFAER+VL GLP AH+ V
Sbjct: 228 LATDRFSIEYVHGGAEPRQAFAERIVLCGLPGAHKRFV 115
Score = 89.0 bits (188), Expect(5) = 1e-026
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = +2 / -3
Query: 269 SFLIAAASGHPSGWRG*TVPARRNHGCRQSAHGRRP*GQGNTGS 400
SFLIAAASGHP G RG*T A+ NHGCRQSAHG+RP*GQGNTGS
Sbjct: 394 SFLIAAASGHPLGLRG*TGAAQHNHGCRQSAHGQRP*GQGNTGS 263
Score = 72.1 bits (151), Expect(5) = 6e-025
Identities = 33/41 (80%), Positives = 34/41 (82%)
Frame = -3 / +2
Query: 376 WASAVSTLATTVIAPSRHRSTPPARRMTRSSSNQEAKTDSL 254
WA AVSTLATTVI S RSTP A+RMTRSSSNQEAKTD L
Sbjct: 287 WALAVSTLATTVIVLSSSRSTPQAQRMTRSSSNQEAKTDPL 409
Score = 40.9 bits (83), Expect(7) = 1e-097
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 87 SLFWFLWFCQIRYTY 43
SLFWFLWFCQ+ YT+
Sbjct: 608 SLFWFLWFCQVHYTH 652
Score = 40.0 bits (81), Expect(5) = 6e-025
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3 / +2
Query: 535 WATGSPPRTTRSANACLG 482
WA GSP RT RSANACLG
Sbjct: 128 WAPGSPQRTIRSANACLG 181
Score = 35.4 bits (71), Expect(7) = 1e-097
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1 / +2
Query: 153 TVCTVYVNCEICGY 112
TVCTVY NCE+CG+
Sbjct: 545 TVCTVYGNCEVCGH 586
Score = 35.0 bits (70), Expect(5) = 1e-026
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2 / -3
Query: 482 TQAGVC*ACRSWWASSC 532
TQAGVC*A RS WAS C
Sbjct: 181 TQAGVC*AYRSLWASRC 131
Score = 34.5 bits (69), Expect(5) = 4e-090
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3 / -2
Query: 111 NNHKSRNSHRQYIQSIQNNINT 176
N+HK NSHRQYIQS T
Sbjct: 587 NDHKPHNSHRQYIQSCDQPFKT 522
Score = 33.1 bits (66), Expect(7) = 1e-097
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3 / +1
Query: 46 LYTCLKRTEHTKNLF 2
LYTCLKR EHT+ LF
Sbjct: 643 LYTCLKRIEHTRALF 687
Score = 33.1 bits (66), Expect(5) = 5e-080
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -2 / +3
Query: 83 CFGFFGSVRYVI 48
CFGFFGSVRY+I
Sbjct: 612 CFGFFGSVRYII 647
Score = 33.1 bits (66), Expect(5) = 4e-090
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / -2
Query: 3 KRFLVCSVLFKHVY 44
KR LVCS+LFKHVY
Sbjct: 686 KRALVCSILFKHVY 645
Score = 32.7 bits (65), Expect(5) = 5e-080
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -2 / +3
Query: 47 LIHMFKEN*TYQKPF 3
+IHMFKE+*TYQ PF
Sbjct: 642 IIHMFKED*TYQGPF 686
Score = 32.2 bits (64), Expect(5) = 2e-048
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1 / -3
Query: 4 KGFWYVQFSLNMCI 45
KG WYVQ SLNMCI
Sbjct: 685 KGPWYVQSSLNMCI 644
Score = 31.8 bits (63), Expect(5) = 4e-090
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -3
Query: 49 ITYLTEPKKPKQT 87
I YLTEPKKPKQT
Sbjct: 646 IMYLTEPKKPKQT 608
Score = 29.5 bits (58), Expect(5) = 2e-048
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3 / -2
Query: 48 YNVSDRTKETKTD 86
YNV DRTKETKT+
Sbjct: 647 YNVPDRTKETKTN 609
Score = 29.0 bits (57), Expect(5) = 5e-080
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3 / +1
Query: 154 DCMYCLCELRDLW 116
DCMYCL EL LW
Sbjct: 544 DCMYCLWEL*GLW 582
Score = 27.2 bits (53), Expect(5) = 2e-048
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2 / -1
Query: 113 *PQISQFT*TVHTV 154
*PQ SQF *TVHTV
Sbjct: 585 *PQTSQFP*TVHTV 544
Score = 26.7 bits (52), Expect(5) = 6e-025
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 45 YTHV*RELNIPKTF 4
YTHV*R LNIP F
Sbjct: 644 YTHV*RGLNIPGPF 685
Score = 26.3 bits (51), Expect(5) = 2e-048
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2 / -3
Query: 629 GTLGGGADPP* 661
GTLGGGA PP*
Sbjct: 34 GTLGGGAGPP* 2
Score = 26.3 bits (51), Expect(7) = 1e-097
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1 / +1
Query: 225 ALD*ATDSSGCVKLH 181
AL+*ATDSS VKLH
Sbjct: 466 ALN*ATDSSESVKLH 510
Score = 24.9 bits (48), Expect(7) = 1e-097
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1 / +3
Query: 111 LLPCCP*ISLFWF 73
++PCCP*I F F
Sbjct: 585 IIPCCP*IVCFGF 623
Score = 24.4 bits (47), Expect(5) = 1e-026
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3 / -1
Query: 618 VLLQVLWXXEQIRLD 662
+LL VLW EQ+ LD
Sbjct: 45 ILL*VLWVVEQVHLD 1
Score = 24.4 bits (47), Expect(5) = 6e-025
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / +3
Query: 164 VLNRLYVLSM*IARF 120
++ RLYVLSM I RF
Sbjct: 534 LITRLYVLSMGIVRF 578
Score = 24.4 bits (47), Expect(5) = 1e-026
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1 / -2
Query: 133 HIDSTYSLFKTTSTRC 180
+I S FKTTSTRC
Sbjct: 554 YIQSCDQPFKTTSTRC 507
Score = 23.5 bits (45), Expect(5) = 6e-025
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2 / +2
Query: 227 QR*IELQILQDA*SCM 180
Q *IEL ILQ+ *SC+
Sbjct: 464 QH*IELLILQNL*SCI 511
Score = 23.5 bits (45), Expect(5) = 5e-080
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3 / +3
Query: 226 SARLSYRFFRMREAA 182
S +LSY FFR+ EAA
Sbjct: 465 STKLSY*FFRICEAA 509
Score = 22.6 bits (43), Expect(7) = 1e-097
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / +1
Query: 182 MHRVDVVLN 156
+HRVDVVLN
Sbjct: 505 LHRVDVVLN 531
Score = 21.7 bits (41), Expect(5) = 4e-090
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / -1
Query: 181 MQLHAS*RICSSI* 222
MQLH *RI SSI*
Sbjct: 510 MQLHRF*RISSSI* 469
Score = 21.7 bits (41), Expect(5) = 1e-026
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / -1
Query: 14 GMFSSL*TCV* 46
GMF+ L*TCV*
Sbjct: 675 GMFNPL*TCV* 643
>gb|CD429899.1|CD429899 ETH1_16_D12.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_16_D12_A002 3', mRNA sequence
Length = 659
Score = 281 bits (608), Expect(5) = 2e-087
Identities = 116/130 (89%), Positives = 120/130 (92%)
Frame = +1 / -3
Query: 247 NGAMSPS*LPDCCCFWSSVGLEGLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMAS 426
+ M *LPDCCCFWSSVGLEGLNG+CSAQSRLSPECSRPTPMRSR*YW* EIITFM S
Sbjct: 390 HSTMGLF*LPDCCCFWSSVGLEGLNGSCSAQSRLSPECSRPTPMRSR*YW**EIITFMES 211
Query: 427 TYPLPQIDSP*SMFMVAPNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMN 606
T PLPQIDSP*SMFMVAPNPGRRLLSVSF VGFQ+PT ASCADGWLFLIGVIHRHIAAMN
Sbjct: 210 TNPLPQIDSP*SMFMVAPNPGRRLLSVSFFVGFQVPTNASCADGWLFLIGVIHRHIAAMN 31
Query: 607 ASVAFCSRYS 636
A+VAFCSRYS
Sbjct: 30 ANVAFCSRYS 1
Score = 273 bits (591), Expect(6) = 9e-091
Identities = 107/112 (95%), Positives = 110/112 (98%)
Frame = -2 / +2
Query: 635 EYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILY 456
EYLEQNATLAFMAAMWRWMTPIKKSQPSAH+AFVG WKPTKNDTLSKRLPGFGATMNILY
Sbjct: 2 EYLEQNATLAFMAAMWRWMTPIKKSQPSAHEAFVGTWKPTKNDTLSKRLPGFGATMNILY 181
Query: 455 GESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSSPT 300
GESICGKG+VD+MNVIISHYQYYLDLMGVGREHSGDNRDCAEQ PFNPSSPT
Sbjct: 182 GESICGKGFVDSMNVIISHYQYYLDLMGVGREHSGDNRDCAEQLPFNPSSPT 337
Score = 235 bits (508), Expect(6) = 4e-075
Identities = 100/130 (76%), Positives = 111/130 (85%)
Frame = -1 / +1
Query: 636 RVPGAERDAGIHGGDVAVDDADQEEPAVGARRLRGQLEAHQERHAQQTPAWVRRHHEHTL 457
RVP AE D GIHGG+VAVDD DQEEPAV AR + G LEAH+ER+AQQTPAWVRRHHEHTL
Sbjct: 1 RVPRAECDVGIHGGNVAVDDTDQEEPAVSARSVCGHLEAHKERYAQQTPAWVRRHHEHTL 180
Query: 456 RRVDLRQGIRRRHERYNLALPVLP*PHGRRP*ALWRQP*LRRAGTVQPLQPDG*PEAAAI 277
R+DL QGIR HE YNL+LPVLP*PHGR P ALWRQP*L A VQPL+P+G*PEAAAI
Sbjct: 181 WRIDLWQGIR*LHECYNLSLPVLP*PHGRWPRALWRQP*LC*AAPVQPLKPNG*PEAAAI 360
Query: 276 RKLRRTHCAI 247
RKL++THCA+
Sbjct: 361 RKLKQTHCAM 390
Score = 152 bits (327), Expect(4) = 8e-045
Identities = 71/98 (72%), Positives = 78/98 (79%)
Frame = +3 / -2
Query: 255 NESVLASXXXXXXVIRRAGGVERCLLGAITVVARVLTADAHEVKVILVVRDYNVHGVDVS 434
N SVLAS VIR A GVER LL ITVVARVL A+AHEVKVILVVRDYN+HGV+ S
Sbjct: 382 NGSVLAS*LLLLLVIRWA*GVERELLSTITVVARVLAANAHEVKVILVVRDYNIHGVNES 203
Query: 435 LAADRLAVEYVHGGAEPRQAFAERVVLGGLPVAHEGVV 548
LA DR ++EYVHGGAEPRQAFAER+VL GLP AH+ V
Sbjct: 202 LATDRFSIEYVHGGAEPRQAFAERIVLCGLPGAHKRFV 89
Score = 85.4 bits (180), Expect(4) = 3e-023
Identities = 36/44 (81%), Positives = 38/44 (86%)
Frame = +2 / -1
Query: 269 SFLIAAASGHPSGWRG*TVPARRNHGCRQSAHGRRP*GQGNTGS 400
SFLIAAASGHP G RG*T A+ NHGCRQSA G+RP*GQGNTGS
Sbjct: 368 SFLIAAASGHPLGLRG*TGAAQHNHGCRQSARGQRP*GQGNTGS 237
Score = 70.3 bits (147), Expect(5) = 2e-024
Identities = 32/41 (78%), Positives = 33/41 (80%)
Frame = -3 / +3
Query: 376 WASAVSTLATTVIAPSRHRSTPPARRMTRSSSNQEAKTDSL 254
WA A STLATTVI S RSTP A+RMTRSSSNQEAKTD L
Sbjct: 261 WALAASTLATTVIVLSSSRSTPQAQRMTRSSSNQEAKTDPL 383
Score = 40.9 bits (83), Expect(6) = 9e-091
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 87 SLFWFLWFCQIRYTY 43
SLFWFLWFCQ+ YT+
Sbjct: 582 SLFWFLWFCQVHYTH 626
Score = 40.0 bits (81), Expect(5) = 2e-024
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3 / +3
Query: 535 WATGSPPRTTRSANACLG 482
WA GSP RT RSANACLG
Sbjct: 102 WAPGSPQRTIRSANACLG 155
Score = 35.4 bits (71), Expect(6) = 9e-091
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1 / +3
Query: 153 TVCTVYVNCEICGY 112
TVCTVY NCE+CG+
Sbjct: 519 TVCTVYGNCEVCGH 560
Score = 35.0 bits (70), Expect(4) = 3e-023
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2 / -1
Query: 482 TQAGVC*ACRSWWASSC 532
TQAGVC*A RS WAS C
Sbjct: 155 TQAGVC*AYRSLWASRC 105
Score = 34.5 bits (69), Expect(5) = 2e-087
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3 / -3
Query: 111 NNHKSRNSHRQYIQSIQNNINT 176
N+HK NSHRQYIQS T
Sbjct: 561 NDHKPHNSHRQYIQSCDQPFKT 496
Score = 33.1 bits (66), Expect(6) = 4e-075
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -2 / +1
Query: 83 CFGFFGSVRYVI 48
CFGFFGSVRY+I
Sbjct: 586 CFGFFGSVRYII 621
Score = 32.2 bits (64), Expect(5) = 2e-087
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1 / -1
Query: 4 KGFWYVQFSLNMCI 45
KG WYVQ SLNMCI
Sbjct: 659 KGPWYVQSSLNMCI 618
Score = 31.8 bits (63), Expect(5) = 2e-087
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -1
Query: 49 ITYLTEPKKPKQT 87
I YLTEPKKPKQT
Sbjct: 620 IMYLTEPKKPKQT 582
Score = 30.9 bits (61), Expect(4) = 8e-045
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3 / -3
Query: 6 RFLVCSVLFKHVY 44
R LVCS+LFKHVY
Sbjct: 657 RALVCSILFKHVY 619
Score = 30.4 bits (60), Expect(6) = 9e-091
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3 / +2
Query: 46 LYTCLKRTEHTKNL 5
LYTCLKR EHT+ L
Sbjct: 617 LYTCLKRIEHTRAL 658
Score = 29.9 bits (59), Expect(6) = 4e-075
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -2 / +1
Query: 47 LIHMFKEN*TYQKP 6
+IHMFKE+*TYQ P
Sbjct: 616 IIHMFKED*TYQGP 657
Score = 29.5 bits (58), Expect(4) = 8e-045
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3 / -3
Query: 48 YNVSDRTKETKTD 86
YNV DRTKETKT+
Sbjct: 621 YNVPDRTKETKTN 583
Score = 29.0 bits (57), Expect(6) = 4e-075
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3 / +2
Query: 154 DCMYCLCELRDLW 116
DCMYCL EL LW
Sbjct: 518 DCMYCLWEL*GLW 556
Score = 27.2 bits (53), Expect(4) = 8e-045
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2 / -2
Query: 113 *PQISQFT*TVHTV 154
*PQ SQF *TVHTV
Sbjct: 559 *PQTSQFP*TVHTV 518
Score = 26.7 bits (52), Expect(5) = 2e-024
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / +3
Query: 45 YTHV*RELNIPKTF 4
YTHV*R LNIP F
Sbjct: 618 YTHV*RGLNIPGPF 659
Score = 26.3 bits (51), Expect(6) = 9e-091
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1 / +2
Query: 225 ALD*ATDSSGCVKLH 181
AL+*ATDSS VKLH
Sbjct: 440 ALN*ATDSSESVKLH 484
Score = 24.9 bits (48), Expect(6) = 4e-075
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1 / +1
Query: 111 LLPCCP*ISLFWF 73
++PCCP*I F F
Sbjct: 559 IIPCCP*IVCFGF 597
Score = 24.4 bits (47), Expect(5) = 2e-024
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / +1
Query: 164 VLNRLYVLSM*IARF 120
++ RLYVLSM I RF
Sbjct: 508 LITRLYVLSMGIVRF 552
Score = 24.4 bits (47), Expect(4) = 3e-023
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1 / -3
Query: 133 HIDSTYSLFKTTSTRC 180
+I S FKTTSTRC
Sbjct: 528 YIQSCDQPFKTTSTRC 481
Score = 23.5 bits (45), Expect(6) = 4e-075
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3 / +1
Query: 226 SARLSYRFFRMREAA 182
S +LSY FFR+ EAA
Sbjct: 439 STKLSY*FFRICEAA 483
Score = 23.5 bits (45), Expect(5) = 2e-024
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2 / +3
Query: 227 QR*IELQILQDA*SCM 180
Q *IEL ILQ+ *SC+
Sbjct: 438 QH*IELLILQNL*SCI 485
Score = 22.6 bits (43), Expect(6) = 9e-091
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / +2
Query: 182 MHRVDVVLN 156
+HRVDVVLN
Sbjct: 479 LHRVDVVLN 505
Score = 21.7 bits (41), Expect(5) = 2e-087
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / -2
Query: 181 MQLHAS*RICSSI* 222
MQLH *RI SSI*
Sbjct: 484 MQLHRF*RISSSI* 443
Score = 21.7 bits (41), Expect(4) = 3e-023
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / -2
Query: 14 GMFSSL*TCV* 46
GMF+ L*TCV*
Sbjct: 649 GMFNPL*TCV* 617
>gb|CD432801.1|CD432801 ETH1_33_E10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_33_E10_A002 3', mRNA sequence
Length = 656
Score = 274 bits (592), Expect(5) = 1e-085
Identities = 113/127 (88%), Positives = 117/127 (92%)
Frame = +1 / -1
Query: 247 NGAMSPS*LPDCCCFWSSVGLEGLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMAS 426
+ M *LPDCCCFWSSVGLEGLNG+CSAQSRLSPECSRPTPMRSR*YW* EIITFM S
Sbjct: 383 HSTMGLF*LPDCCCFWSSVGLEGLNGSCSAQSRLSPECSRPTPMRSR*YW**EIITFMES 204
Query: 427 TYPLPQIDSP*SMFMVAPNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMN 606
T PLPQIDSP*SMFMVAPNPGRRLLSVSF VGFQ+PT ASCADGWLFLIGVIHRHIAAMN
Sbjct: 203 TNPLPQIDSP*SMFMVAPNPGRRLLSVSFFVGFQVPTNASCADGWLFLIGVIHRHIAAMN 24
Query: 607 ASVAFCS 627
A+VAFCS
Sbjct: 23 ANVAFCS 3
Score = 268 bits (579), Expect(6) = 1e-090
Identities = 105/110 (95%), Positives = 108/110 (98%)
Frame = -2 / +1
Query: 629 LEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILYGE 450
LEQNATLAFMAAMWRWMTPIKKSQPSAH+AFVG WKPTKNDTLSKRLPGFGATMNILYGE
Sbjct: 1 LEQNATLAFMAAMWRWMTPIKKSQPSAHEAFVGTWKPTKNDTLSKRLPGFGATMNILYGE 180
Query: 449 SICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSSPT 300
SICGKG+VD+MNVIISHYQYYLDLMGVGREHSGDNRDCAEQ PFNPSSPT
Sbjct: 181 SICGKGFVDSMNVIISHYQYYLDLMGVGREHSGDNRDCAEQLPFNPSSPT 330
Score = 231 bits (499), Expect(5) = 1e-072
Identities = 98/126 (77%), Positives = 109/126 (86%)
Frame = -1 / +3
Query: 624 AERDAGIHGGDVAVDDADQEEPAVGARRLRGQLEAHQERHAQQTPAWVRRHHEHTLRRVD 445
AE D GIHGG+VAVDD DQEEPAV AR + G LEAH+ER+AQQTPAWVRRHHEHTL R+D
Sbjct: 6 AECDVGIHGGNVAVDDTDQEEPAVSARSVCGHLEAHKERYAQQTPAWVRRHHEHTLWRID 185
Query: 444 LRQGIRRRHERYNLALPVLP*PHGRRP*ALWRQP*LRRAGTVQPLQPDG*PEAAAIRKLR 265
L QGIR HE YNL+LPVLP*PHGR P*ALWRQP*L A VQPL+P+G*PEAAAIRKL+
Sbjct: 186 LWQGIR*LHECYNLSLPVLP*PHGRWP*ALWRQP*LC*AAPVQPLKPNG*PEAAAIRKLK 365
Query: 264 RTHCAI 247
+THCA+
Sbjct: 366 QTHCAM 383
Score = 155 bits (332), Expect(4) = 4e-047
Identities = 72/98 (73%), Positives = 79/98 (80%)
Frame = +3 / -3
Query: 255 NESVLASXXXXXXVIRRAGGVERCLLGAITVVARVLTADAHEVKVILVVRDYNVHGVDVS 434
N SVLAS VIR A GVER LL ITVVARVLTA+AHEVKVILVVRDYN+HGV+ S
Sbjct: 375 NGSVLAS*LLLLLVIRWA*GVERELLSTITVVARVLTANAHEVKVILVVRDYNIHGVNES 196
Query: 435 LAADRLAVEYVHGGAEPRQAFAERVVLGGLPVAHEGVV 548
LA DR ++EYVHGGAEPRQAFAER+VL GLP AH+ V
Sbjct: 195 LATDRFSIEYVHGGAEPRQAFAERIVLCGLPGAHKRFV 82
Score = 89.0 bits (188), Expect(4) = 3e-024
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = +2 / -2
Query: 269 SFLIAAASGHPSGWRG*TVPARRNHGCRQSAHGRRP*GQGNTGS 400
SFLIAAASGHP G RG*T A+ NHGCRQSAHG+RP*GQGNTGS
Sbjct: 361 SFLIAAASGHPLGLRG*TGAAQHNHGCRQSAHGQRP*GQGNTGS 230
Score = 72.1 bits (151), Expect(5) = 4e-025
Identities = 33/41 (80%), Positives = 34/41 (82%)
Frame = -3 / +2
Query: 376 WASAVSTLATTVIAPSRHRSTPPARRMTRSSSNQEAKTDSL 254
WA AVSTLATTVI S RSTP A+RMTRSSSNQEAKTD L
Sbjct: 254 WALAVSTLATTVIVLSSSRSTPQAQRMTRSSSNQEAKTDPL 376
Score = 40.9 bits (83), Expect(6) = 1e-090
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 87 SLFWFLWFCQIRYTY 43
SLFWFLWFCQ+ YT+
Sbjct: 575 SLFWFLWFCQVHYTH 619
Score = 40.0 bits (81), Expect(5) = 4e-025
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3 / +2
Query: 535 WATGSPPRTTRSANACLG 482
WA GSP RT RSANACLG
Sbjct: 95 WAPGSPQRTIRSANACLG 148
Score = 35.4 bits (71), Expect(6) = 1e-090
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1 / +2
Query: 153 TVCTVYVNCEICGY 112
TVCTVY NCE+CG+
Sbjct: 512 TVCTVYGNCEVCGH 553
Score = 35.0 bits (70), Expect(4) = 3e-024
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2 / -2
Query: 482 TQAGVC*ACRSWWASSC 532
TQAGVC*A RS WAS C
Sbjct: 148 TQAGVC*AYRSLWASRC 98
Score = 35.0 bits (70), Expect(5) = 1e-085
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3 / -1
Query: 111 NNHKSRNSHRQYIQSIQNNINT 176
N+HK NSHRQYIQS + T
Sbjct: 554 NDHKPHNSHRQYIQSWDQPVKT 489
Score = 33.1 bits (66), Expect(6) = 1e-090
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3 / +1
Query: 46 LYTCLKRTEHTKNLF 2
LYTCLKR EHT+ LF
Sbjct: 610 LYTCLKRIEHTRALF 654
Score = 33.1 bits (66), Expect(5) = 1e-072
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -2 / +3
Query: 83 CFGFFGSVRYVI 48
CFGFFGSVRY+I
Sbjct: 579 CFGFFGSVRYII 614
Score = 33.1 bits (66), Expect(5) = 1e-085
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / -1
Query: 3 KRFLVCSVLFKHVY 44
KR LVCS+LFKHVY
Sbjct: 653 KRALVCSILFKHVY 612
Score = 32.7 bits (65), Expect(5) = 1e-072
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -2 / +3
Query: 47 LIHMFKEN*TYQKPF 3
+IHMFKE+*TYQ PF
Sbjct: 609 IIHMFKED*TYQGPF 653
Score = 32.2 bits (64), Expect(4) = 4e-047
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1 / -2
Query: 4 KGFWYVQFSLNMCI 45
KG WYVQ SLNMCI
Sbjct: 652 KGPWYVQSSLNMCI 611
Score = 31.8 bits (63), Expect(5) = 1e-085
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -2
Query: 49 ITYLTEPKKPKQT 87
I YLTEPKKPKQT
Sbjct: 613 IMYLTEPKKPKQT 575
Score = 29.5 bits (58), Expect(4) = 4e-047
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3 / -1
Query: 48 YNVSDRTKETKTD 86
YNV DRTKETKT+
Sbjct: 614 YNVPDRTKETKTN 576
Score = 29.0 bits (57), Expect(5) = 1e-072
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3 / +1
Query: 154 DCMYCLCELRDLW 116
DCMYCL EL LW
Sbjct: 511 DCMYCLWEL*GLW 549
Score = 29.0 bits (57), Expect(4) = 4e-047
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2 / -3
Query: 113 *PQISQFT*TVHTVYSKQHQHD 178
*PQ SQF *TVHTV Q++
Sbjct: 552 *PQTSQFP*TVHTVLGSASQNN 487
Score = 26.7 bits (52), Expect(5) = 4e-025
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 45 YTHV*RELNIPKTF 4
YTHV*R LNIP F
Sbjct: 611 YTHV*RGLNIPGPF 652
Score = 26.3 bits (51), Expect(6) = 1e-090
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1 / +1
Query: 225 ALD*ATDSSGCVKLH 181
AL+*ATDSS VKLH
Sbjct: 433 ALN*ATDSSESVKLH 477
Score = 24.9 bits (48), Expect(6) = 1e-090
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1 / +3
Query: 111 LLPCCP*ISLFWF 73
++PCCP*I F F
Sbjct: 552 IIPCCP*IVCFGF 590
Score = 24.9 bits (48), Expect(5) = 4e-025
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -2 / +3
Query: 170 DVVLNRLYVLSM*IARF 120
D ++ RLYVLSM I RF
Sbjct: 495 DWLIPRLYVLSMGIVRF 545
Score = 24.0 bits (46), Expect(4) = 3e-024
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +1 / -2
Query: 121 NLAIHIDSTYSL 156
NL I IDSTYSL
Sbjct: 544 NLTIPIDSTYSL 509
Score = 23.5 bits (45), Expect(5) = 4e-025
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2 / +2
Query: 227 QR*IELQILQDA*SCM 180
Q *IEL ILQ+ *SC+
Sbjct: 431 QH*IELLILQNL*SCI 478
Score = 23.5 bits (45), Expect(5) = 1e-072
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3 / +3
Query: 226 SARLSYRFFRMREAA 182
S +LSY FFR+ EAA
Sbjct: 432 STKLSY*FFRICEAA 476
Score = 21.7 bits (41), Expect(5) = 1e-085
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / -3
Query: 181 MQLHAS*RICSSI* 222
MQLH *RI SSI*
Sbjct: 477 MQLHRF*RISSSI* 436
Score = 21.7 bits (41), Expect(4) = 3e-024
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / -3
Query: 14 GMFSSL*TCV* 46
GMF+ L*TCV*
Sbjct: 642 GMFNPL*TCV* 610
>gb|CW184174.1|CW184174 104_600_11165012_116_36684_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11165012, DNA
sequence
Length = 695
Score = 235 bits (507), Expect = 6e-061
Identities = 93/122 (76%), Positives = 102/122 (83%)
Frame = -2 / +2
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G GIK DLL PE LEQNATLAF AA+WRWMTP+K+ QPSAHD FVGNWKPTK DTLSKR
Sbjct: 320 GKGIKQDLLNHPELLEQNATLAFEAAIWRWMTPMKRKQPSAHDVFVGNWKPTKKDTLSKR 499
Query: 491 LPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNP 312
PGFGATMNILYG++ICGKG D MN IISHYQ+YL LMGVGRE S DN DC++Q F+P
Sbjct: 500 YPGFGATMNILYGDAICGKGSTDKMNFIISHYQHYLGLMGVGRERSEDNLDCSDQVAFHP 679
Query: 311 SS 306
SS
Sbjct: 680 SS 685
Score = 150 bits (322), Expect = 2e-035
Identities = 71/121 (58%), Positives = 83/121 (68%)
Frame = +1 / -3
Query: 310 EGLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPG 489
+G S QS+LS E SRPTP++ R* W* +I+ F+ S PLPQ+ SP MFMVAP PG
Sbjct: 681 DG*KATWSLQSKLSSERSRPTPIKPR*CW*WDIMKFILSVDPLPQMASPYRMFMVAPKPG 502
Query: 490 RRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPP 669
L +VSFLVGFQLPT S ADG IGVIH +AA NASVAFCS SG ++S LIP
Sbjct: 501 YLLDNVSFLVGFQLPTNTS*ADGCFLFIGVIHLQMAASNASVAFCSSSSGWFNKSCLIPF 322
Query: 670 P 672
P
Sbjct: 321 P 319
>gb|BG159414.1|BG159414 OV2_7_E10.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 473
Score = 192 bits (414), Expect(3) = 7e-053
Identities = 80/93 (86%), Positives = 83/93 (89%)
Frame = +1 / -2
Query: 247 NGAMSPS*LPDCCCFWSSVGLEGLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMAS 426
+ M *LPDCCCFWSSVGLEGLNG+CSAQSRLSPECSRPTPMRSR*YW* EIITFM S
Sbjct: 280 HSTMGLF*LPDCCCFWSSVGLEGLNGSCSAQSRLSPECSRPTPMRSR*YW**EIITFMES 101
Query: 427 TYPLPQIDSP*SMFMVAPNPGRRLLSVSFLVGF 525
T PLPQ DSP*SMFMVAPNPGRR+LSVSF VGF
Sbjct: 100 TNPLPQSDSP*SMFMVAPNPGRRMLSVSFFVGF 2
Score = 179 bits (385), Expect(5) = 9e-054
Identities = 70/75 (93%), Positives = 73/75 (97%)
Frame = -2 / +3
Query: 524 KPTKNDTLSKRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
KPTKNDTLS RLPGFGATMNILYGES+CGKG+VD+MNVIISHYQYYLDLMGVGREHSGDN
Sbjct: 3 KPTKNDTLSIRLPGFGATMNILYGESLCGKGFVDSMNVIISHYQYYLDLMGVGREHSGDN 182
Query: 344 RDCAEQAPFNPSSPT 300
RDCAEQ PFNPSSPT
Sbjct: 183 RDCAEQLPFNPSSPT 227
Score = 171 bits (367), Expect(3) = 8e-046
Identities = 72/93 (77%), Positives = 81/93 (87%)
Frame = -1 / +2
Query: 525 EAHQERHAQQTPAWVRRHHEHTLRRVDLRQGIRRRHERYNLALPVLP*PHGRRP*ALWRQ 346
EAH+ER+AQ TPAWVRRHHEHTL R+ L QGIR HE YNL+LPVLP*PHGR P*ALWRQ
Sbjct: 2 EAHKERYAQHTPAWVRRHHEHTLWRIALWQGIR*LHECYNLSLPVLP*PHGRWP*ALWRQ 181
Query: 345 P*LRRAGTVQPLQPDG*PEAAAIRKLRRTHCAI 247
P*L A VQPL+P+G*PEAAAIRKL++THCA+
Sbjct: 182 P*LC*AAPVQPLKPNG*PEAAAIRKLKQTHCAM 280
Score = 143 bits (307), Expect(2) = 4e-035
Identities = 66/90 (73%), Positives = 74/90 (82%)
Frame = +3 / -1
Query: 255 NESVLASXXXXXXVIRRAGGVERCLLGAITVVARVLTADAHEVKVILVVRDYNVHGVDVS 434
N SVLAS VIR A GVER LL ITVVARVLTA+AHEVKVILVVRDYN+HGV+ S
Sbjct: 272 NGSVLAS*LLLLLVIRWA*GVERELLSTITVVARVLTANAHEVKVILVVRDYNIHGVNES 93
Query: 435 LAADRLAVEYVHGGAEPRQAFAERVVLGGL 524
LA +R ++EYVHGGAEPRQA+AER+VL GL
Sbjct: 92 LATERFSIEYVHGGAEPRQAYAERIVLCGL 3
Score = 89.0 bits (188), Expect(3) = 1e-022
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = +2 / -3
Query: 269 SFLIAAASGHPSGWRG*TVPARRNHGCRQSAHGRRP*GQGNTGS 400
SFLIAAASGHP G RG*T A+ NHGCRQSAHG+RP*GQGNTGS
Sbjct: 258 SFLIAAASGHPLGLRG*TGAAQHNHGCRQSAHGQRP*GQGNTGS 127
Score = 35.4 bits (71), Expect(5) = 9e-054
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1 / +1
Query: 153 TVCTVYVNCEICGY 112
TVCTVY NCE+CG+
Sbjct: 409 TVCTVYGNCEVCGH 450
Score = 34.5 bits (69), Expect(3) = 7e-053
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3 / -2
Query: 111 NNHKSRNSHRQYIQSIQNNINT 176
N+HK NSHRQYIQS T
Sbjct: 451 NDHKPHNSHRQYIQSCDQPFKT 386
Score = 31.3 bits (62), Expect(3) = 1e-022
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2 / -3
Query: 482 TQAGVC*ACRSWWAS 526
TQAGVC*A RS WAS
Sbjct: 45 TQAGVC*AYRSLWAS 1
Score = 29.0 bits (57), Expect(3) = 8e-046
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3 / +3
Query: 154 DCMYCLCELRDLW 116
DCMYCL EL LW
Sbjct: 408 DCMYCLWEL*GLW 446
Score = 27.2 bits (53), Expect(2) = 4e-035
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2 / -1
Query: 113 *PQISQFT*TVHTV 154
*PQ SQF *TVHTV
Sbjct: 449 *PQTSQFP*TVHTV 408
Score = 26.3 bits (51), Expect(5) = 9e-054
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1 / +3
Query: 225 ALD*ATDSSGCVKLH 181
AL+*ATDSS VKLH
Sbjct: 330 ALN*ATDSSESVKLH 374
Score = 24.4 bits (47), Expect(3) = 1e-022
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1 / -2
Query: 133 HIDSTYSLFKTTSTRC 180
+I S FKTTSTRC
Sbjct: 418 YIQSCDQPFKTTSTRC 371
Score = 23.5 bits (45), Expect(3) = 8e-046
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3 / +2
Query: 226 SARLSYRFFRMREAA 182
S +LSY FFR+ EAA
Sbjct: 329 STKLSY*FFRICEAA 373
Score = 22.6 bits (43), Expect(5) = 9e-054
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / +3
Query: 182 MHRVDVVLN 156
+HRVDVVLN
Sbjct: 369 LHRVDVVLN 395
Score = 21.7 bits (41), Expect(5) = 9e-054
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -1 / +2
Query: 111 LLPCCP*I 88
++PCCP*I
Sbjct: 449 IIPCCP*I 472
Score = 21.7 bits (41), Expect(3) = 7e-053
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / -1
Query: 181 MQLHAS*RICSSI* 222
MQLH *RI SSI*
Sbjct: 374 MQLHRF*RISSSI* 333
>gb|BG273230.1|BG273230 OV2_28_E07.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 381
Score = 199 bits (428), Expect = 5e-050
Identities = 79/106 (74%), Positives = 86/106 (81%)
Frame = -2 / +2
Query: 623 QNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILYGESI 444
QNATLAF AA+WRWMTP+K+ QPSAHD FVGNWKPTK DTLSKR GFGA MNILYG++I
Sbjct: 2 QNATLAFEAAIWRWMTPMKRKQPSAHDVFVGNWKPTKKDTLSKRYRGFGAAMNILYGDAI 181
Query: 443 CGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSS 306
CGKG D M IISHYQ+YL LMGVGRE S DN D + Q FNPSS
Sbjct: 182 CGKGSTDKMRFIISHYQHYLGLMGVGRERSEDNLDSSVQVAFNPSS 319
Score = 127 bits (271), Expect = 2e-028
Identities = 60/110 (54%), Positives = 72/110 (65%)
Frame = +1 / -1
Query: 295 SSVGLEGLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMV 474
S + +GL + S+LS E SRPTP++ R* W* +I+ + S PLPQ+ SP MFM
Sbjct: 330 SQLSDDGLKATWTLLSKLSSERSRPTPIKPR*CW*WDIMNLILSVDPLPQMASPYRMFMA 151
Query: 475 APNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFC 624
AP P L +VSFLVGFQLPT S ADG IGVIH +AA NASVAFC
Sbjct: 150 APKPRYLLDNVSFLVGFQLPTNTS*ADGCFLFIGVIHLQMAASNASVAFC 1
>gb|CW175039.1|CW175039 104_587_11157726_116_36573_025 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11157726, DNA
sequence
Length = 670
Score = 173 bits (373), Expect = 2e-042
Identities = 68/86 (79%), Positives = 73/86 (84%)
Frame = -2 / -2
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G GIK DLL PE LEQNATLAF AA+WRWMTP+K+ QPSAHD FVGNWKPTK DTLSKR
Sbjct: 261 GKGIKQDLLNHPELLEQNATLAFEAAIWRWMTPMKRKQPSAHDVFVGNWKPTKKDTLSKR 82
Query: 491 LPGFGATMNILYGESICGKGYVDAMN 414
PGFGATMNILYG++ICGKG D MN
Sbjct: 81 YPGFGATMNILYGDAICGKGSTDKMN 4
Score = 116 bits (247), Expect = 5e-025
Identities = 54/86 (62%), Positives = 60/86 (69%)
Frame = +1 / +2
Query: 415 FMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHI 594
F+ S PLPQ+ SP MFMVAP PG L +VSFLVGFQLPT S ADG IGVIH +
Sbjct: 5 FILSVDPLPQMASPYRMFMVAPKPGYLLDNVSFLVGFQLPTNTS*ADGCFLFIGVIHLQM 184
Query: 595 AAMNASVAFCSRYSGXXSRSALIPPP 672
AA NASVAFCS SG ++S LIP P
Sbjct: 185 AASNASVAFCSSSSGWFNKSCLIPFP 262
>gb|CW213874.1|CW213874 104_645_11191795_116_37034_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11191795, DNA
sequence
Length = 266
Score = 158 bits (340), Expect(2) = 2e-037
Identities = 61/77 (79%), Positives = 66/77 (85%)
Frame = -2 / -1
Query: 638 PEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNIL 459
PE LEQNATLAF AA+WRWMTP+K+ QPSAHD FVG WKPTK DTLSKR PGFGATMNIL
Sbjct: 233 PELLEQNATLAFEAAIWRWMTPMKRKQPSAHDVFVGTWKPTKKDTLSKRYPGFGATMNIL 54
Query: 458 YGESICGKGYVDAMNVI 408
YG++ICGKG D MN I
Sbjct: 53 YGDAICGKGSTDKMNFI 3
Score = 109 bits (232), Expect = 5e-023
Identities = 50/78 (64%), Positives = 56/78 (71%)
Frame = +1 / +1
Query: 406 IITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIH 585
I+ F+ S PLPQ+ SP MFMVAP PG L +VSFLVGFQ+PT S ADG IGVIH
Sbjct: 1 IMKFILSVDPLPQMASPYRMFMVAPKPGYLLDNVSFLVGFQVPTNTS*ADGCFLFIGVIH 180
Query: 586 RHIAAMNASVAFCSRYSG 639
+AA NASVAFCSR SG
Sbjct: 181 LQMAASNASVAFCSRSSG 234
Score = 17.6 bits (32), Expect(2) = 2e-037
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2 / -3
Query: 665 GIKADLLXXP 636
GIK DLL P
Sbjct: 261 GIKQDLLIPP 232
>gb|CN132569.1|CN132569 OX1_7_A07.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_7_A07_A002 3', mRNA sequence
Length = 218
Score = 154 bits (330), Expect = 2e-036
Identities = 63/69 (91%), Positives = 66/69 (95%)
Frame = +1 / -2
Query: 268 *LPDCCCFWSSVGLEGLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQI 447
*LP+CCCFWSSVGLEGLNG+CSAQS+LSPECSRPTPMRSR*YW* EIITFM ST PLPQI
Sbjct: 208 *LPNCCCFWSSVGLEGLNGSCSAQSQLSPECSRPTPMRSR*YW**EIITFMESTKPLPQI 29
Query: 448 DSP*SMFMV 474
DSP*SMFMV
Sbjct: 28 DSP*SMFMV 2
Score = 138 bits (297), Expect = 6e-032
Identities = 54/58 (93%), Positives = 56/58 (96%)
Frame = -2 / +3
Query: 473 TMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSSPT 300
TMNILYGESICGKG+VD+MNVIISHYQYYLDLMGVGREHSGDN DCAEQ PFNPSSPT
Sbjct: 3 TMNILYGESICGKGFVDSMNVIISHYQYYLDLMGVGREHSGDNCDCAEQLPFNPSSPT 176
Score = 125 bits (267), Expect = 8e-028
Identities = 55/72 (76%), Positives = 61/72 (84%)
Frame = -1 / +2
Query: 474 HHEHTLRRVDLRQGIRRRHERYNLALPVLP*PHGRRP*ALWRQP*LRRAGTVQPLQPDG* 295
HHEHTL R+DLRQG R HE YNL+LPVLP*PHGR P*ALWRQ *L A VQPL+P+G*
Sbjct: 2 HHEHTLWRIDLRQGFR*LHECYNLSLPVLP*PHGRWP*ALWRQL*LC*AAPVQPLKPNG* 181
Query: 294 PEAAAIRKLRRT 259
PEAAAIRKL++T
Sbjct: 182 PEAAAIRKLKQT 217
Score = 110 bits (234), Expect = 3e-023
Identities = 51/71 (71%), Positives = 58/71 (81%)
Frame = +3 / -1
Query: 261 SVLASXXXXXXVIRRAGGVERCLLGAITVVARVLTADAHEVKVILVVRDYNVHGVDVSLA 440
SVLAS VIR A GVER LL ITVV+RVLTA+AHEVKVILVVRDYN+HGV+ +LA
Sbjct: 215 SVLAS*LLLLLVIRWA*GVERELLSTITVVSRVLTANAHEVKVILVVRDYNIHGVNETLA 36
Query: 441 ADRLAVEYVHG 473
ADR ++EYVHG
Sbjct: 35 ADRFSIEYVHG 3
>gb|CX619978.1|CX619978 GABR1_49_C08.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_49_C08_A002 3', mRNA sequence
Length = 344
Score = 116 bits (248), Expect(4) = 2e-029
Identities = 48/58 (82%), Positives = 50/58 (86%)
Frame = +1 / -3
Query: 247 NGAMSPS*LPDCCCFWSSVGLEGLNGACSAQSRLSPECSRPTPMRSR*YW*CEIITFM 420
+ M *LPDCCCFWSSVGLEGLNG+CS QSRLSPECSRPTPMRSR*Y * EIITFM
Sbjct: 177 HSTMGLF*LPDCCCFWSSVGLEGLNGSCSTQSRLSPECSRPTPMRSR*YG**EIITFM 4
Score = 108 bits (231), Expect(5) = 4e-031
Identities = 46/58 (79%), Positives = 52/58 (89%)
Frame = -1 / +1
Query: 420 HERYNLALPVLP*PHGRRP*ALWRQP*LRRAGTVQPLQPDG*PEAAAIRKLRRTHCAI 247
HE YNL+LPVLP*PHGR P*ALWRQP*L A VQPL+P+G*PEAAAIRKL++THCA+
Sbjct: 4 HECYNLSLPVLP*PHGRWP*ALWRQP*LC*AAPVQPLKPNG*PEAAAIRKLKQTHCAM 177
Score = 97.3 bits (206), Expect(5) = 6e-025
Identities = 37/41 (90%), Positives = 38/41 (92%)
Frame = -2 / +2
Query: 422 AMNVIISHYQYYLDLMGVGREHSGDNRDCAEQAPFNPSSPT 300
+MNVIISHY YYLDLMGVGREHSGDNRDC EQ PFNPSSPT
Sbjct: 2 SMNVIISHYPYYLDLMGVGREHSGDNRDCVEQLPFNPSSPT 124
Score = 27.6 bits (54), Expect(5) = 4e-031
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / +3
Query: 153 TVCTVYVNCEI 121
TVCTVY NCE+
Sbjct: 306 TVCTVYGNCEV 338
Score = 26.7 bits (52), Expect(5) = 6e-025
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3 / +2
Query: 154 DCMYCLCELR 125
DCMYCL ELR
Sbjct: 305 DCMYCLWELR 334
Score = 26.3 bits (51), Expect(5) = 4e-031
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1 / +2
Query: 225 ALD*ATDSSGCVKLH 181
AL+*ATDSS VKLH
Sbjct: 227 ALN*ATDSSESVKLH 271
Score = 25.8 bits (50), Expect(4) = 2e-029
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / -1
Query: 121 NLAIHIDSTYSL 156
NLAI IDSTYSL
Sbjct: 338 NLAIPIDSTYSL 303
Score = 23.5 bits (45), Expect(5) = 6e-025
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3 / +1
Query: 226 SARLSYRFFRMREAA 182
S +LSY FFR+ EAA
Sbjct: 226 STKLSY*FFRICEAA 270
Score = 22.6 bits (43), Expect(5) = 4e-031
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / +2
Query: 182 MHRVDVVLN 156
+HRVDVVLN
Sbjct: 266 LHRVDVVLN 292
Score = 21.7 bits (41), Expect(4) = 2e-029
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / -2
Query: 181 MQLHAS*RICSSI* 222
MQLH *RI SSI*
Sbjct: 271 MQLHRF*RISSSI* 230
Score = 19.4 bits (36), Expect(4) = 2e-029
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3 / -2
Query: 153 SIQNNINTM 179
+IQNNIN M
Sbjct: 295 AIQNNINPM 269
Score = 18.9 bits (35), Expect(5) = 4e-031
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / +2
Query: 248 LPLIKLP 228
LPLIKLP
Sbjct: 206 LPLIKLP 226
Score = 17.6 bits (32), Expect(5) = 6e-025
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -3 / +3
Query: 184 ACIVLMLF*I 155
+CI LMLF*+
Sbjct: 264 SCIGLMLF*M 293
Score = 17.6 bits (32), Expect(5) = 6e-025
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -3 / +3
Query: 247 CH*SSF 230
CH*SSF
Sbjct: 207 CH*SSF 224
>gb|CW336755.1|CW336755 104_836_11483769_148_36106_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11483769, DNA
sequence
Length = 694
Score = 135 bits (290), Expect = 5e-031
Identities = 54/71 (76%), Positives = 59/71 (83%)
Frame = -2 / +2
Query: 518 TKNDTLSKRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRD 339
TK DTLSKR PGFGATMNILYG++ICGKG D MN IISHYQ+YL LMGVGRE S DN D
Sbjct: 2 TKKDTLSKRYPGFGATMNILYGDAICGKGSTDKMNFIISHYQHYLGLMGVGRERSEDNLD 181
Query: 338 CAEQAPFNPSS 306
C++Q FNPSS
Sbjct: 182 CSDQVAFNPSS 214
>gb|BI074334.1|BI074334 IP1_14_F11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 478
Score = 59.3 bits (123), Expect(5) = 2e-023
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +1 / -1
Query: 247 NGAMSPS*LPDCCCFWSSVGLEGLNGACS 333
+ M *LPDCCCFW+SVGLEGLNG+CS
Sbjct: 88 HSTMGLF*LPDCCCFWTSVGLEGLNGSCS 2
Score = 51.5 bits (106), Expect(7) = 1e-030
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = -1 / +2
Query: 330 AGTVQPLQPDG*PEAAAIRKLRRTHCAI 247
A VQPL+P+G PEAAAIRKL++THCA+
Sbjct: 5 AAPVQPLKPNGCPEAAAIRKLKQTHCAM 88
Score = 40.9 bits (83), Expect(7) = 1e-030
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 87 SLFWFLWFCQIRYTY 43
SLFWFLWFCQ+ YT+
Sbjct: 280 SLFWFLWFCQVHYTH 324
Score = 35.4 bits (71), Expect(7) = 1e-030
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1 / +1
Query: 153 TVCTVYVNCEICGY 112
TVCTVY NCE+CG+
Sbjct: 217 TVCTVYGNCEVCGH 258
Score = 34.5 bits (69), Expect(5) = 2e-023
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3 / -1
Query: 111 NNHKSRNSHRQYIQSIQNNINT 176
N+HK NSHRQYIQS T
Sbjct: 259 NDHKPHNSHRQYIQSCDQPFKT 194
Score = 33.1 bits (66), Expect(7) = 1e-030
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3 / +3
Query: 46 LYTCLKRTEHTKNLF 2
LYTCLKR EHT+ LF
Sbjct: 315 LYTCLKRIEHTRALF 359
Score = 33.1 bits (66), Expect(5) = 2e-023
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / -1
Query: 3 KRFLVCSVLFKHVY 44
KR LVCS+LFKHVY
Sbjct: 358 KRALVCSILFKHVY 317
Score = 31.8 bits (63), Expect(5) = 2e-023
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -2
Query: 49 ITYLTEPKKPKQT 87
I YLTEPKKPKQT
Sbjct: 318 IMYLTEPKKPKQT 280
Score = 26.3 bits (51), Expect(7) = 1e-030
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1 / +3
Query: 225 ALD*ATDSSGCVKLH 181
AL+*ATDSS VKLH
Sbjct: 138 ALN*ATDSSESVKLH 182
Score = 24.9 bits (48), Expect(7) = 1e-030
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1 / +2
Query: 111 LLPCCP*ISLFWF 73
++PCCP*I F F
Sbjct: 257 IIPCCP*IVCFGF 295
Score = 22.6 bits (43), Expect(7) = 1e-030
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / +3
Query: 182 MHRVDVVLN 156
+HRVDVVLN
Sbjct: 177 LHRVDVVLN 203
Score = 21.7 bits (41), Expect(5) = 2e-023
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / -3
Query: 181 MQLHAS*RICSSI* 222
MQLH *RI SSI*
Sbjct: 182 MQLHRF*RISSSI* 141
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 799,181,139
Number of Sequences: 832831
Number of extensions: 11432706
Number of successful extensions: 143120
Number of sequences better than 1.0e-020: 15
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 20435953304
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)