TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115184.2.3
(1548 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW330184.1|CW330184 104_827_11480239_148_36008_032 Sorgh... 490 e-137
gb|CW182308.1|CW182308 104_597_11164002_116_36658_067 Sorgh... 437 e-121
gb|CW330183.1|CW330183 104_827_11480239_116_36007_032 Sorgh... 420 e-117
gb|CW271205.1|CW271205 104_743_11402872_116_35341_060 Sorgh... 394 e-108
gb|CF480740.1|CF480740 POL1_67_D01.g1_A002 Pollen Sorghum b... 383 e-105
gb|CW309832.1|CW309832 104_798_11469399_116_35733_052 Sorgh... 364 2e-099
gb|CW241738.1|CW241738 104_701_11218937_148_37556_079 Sorgh... 361 1e-098
gb|CW309833.1|CW309833 104_798_11469399_148_35741_052 Sorgh... 357 3e-097
gb|CL196999.1|CL196999 104_423_10943444_114_32326_070 Sorgh... 348 1e-094
gb|CW270778.1|CW270778 104_742_11402626_148_35337_037 Sorgh... 345 1e-093
gb|CL155266.1|CL155266 104_341_10782005_116_31472_101 Sorgh... 342 6e-093
gb|CW323759.1|CW323759 104_818_11476800_148_35909_096 Sorgh... 341 1e-092
gb|CF489422.1|CF489422 POL1_57_B05.g1_A002 Pollen Sorghum b... 340 4e-092
gb|BZ423602.1|BZ423602 id51c01.g1 WGS-SbicolorF (DH5a methy... 329 9e-089
gb|CW312481.1|CW312481 104_802_11470780_116_35783_010 Sorgh... 328 2e-088
gb|CF489932.1|CF489932 POL1_61_B02.g1_A002 Pollen Sorghum b... 327 2e-088
gb|CF487417.1|CF487417 POL1_43_D12.g1_A002 Pollen Sorghum b... 322 1e-086
gb|CF482996.1|CF482996 POL1_10_C07.g1_A002 Pollen Sorghum b... 184 4e-086
gb|CW323366.1|CW323366 104_817_11476592_148_35963_024 Sorgh... 249 4e-086
gb|CL187602.1|CL187602 104_403_10901000_116_32464_026 Sorgh... 241 1e-084
gb|BG322873.1|BG322873 EM1_15_B11.b1_A002 Embryo 1 (EM1) So... 314 2e-084
gb|CW160105.1|CW160105 104_566_11149707_116_36428_008 Sorgh... 313 4e-084
gb|CF488397.1|CF488397 POL1_49_E07.g1_A002 Pollen Sorghum b... 312 1e-083
gb|CF480256.1|CF480256 POL1_64_D11.g1_A002 Pollen Sorghum b... 173 6e-083
gb|CF489809.1|CF489809 POL1_59_F04.g1_A002 Pollen Sorghum b... 301 2e-080
gb|CF486455.1|CF486455 POL1_37_F12.g1_A002 Pollen Sorghum b... 299 8e-080
gb|CF489443.1|CF489443 POL1_57_D04.g1_A002 Pollen Sorghum b... 299 8e-080
gb|CF480747.1|CF480747 POL1_67_D09.g1_A002 Pollen Sorghum b... 223 2e-078
gb|CF483347.1|CF483347 POL1_21_D07.g1_A002 Pollen Sorghum b... 292 1e-077
gb|CW258561.1|CW258561 104_724_11227944_148_35167_088 Sorgh... 247 5e-077
gb|CW333143.1|CW333143 104_831_11481784_148_36046_064 Sorgh... 236 5e-077
gb|CF481397.1|CF481397 POL1_71_F02.g1_A002 Pollen Sorghum b... 287 3e-076
gb|CF480173.1|CF480173 POL1_64_D11.b1_A002 Pollen Sorghum b... 286 6e-076
gb|BG355410.1|BG355410 EM1_16_B04.b1_A002 Embryo 1 (EM1) So... 286 8e-076
gb|CL149387.1|CL149387 104_330_10777794_114_31353_114 Sorgh... 201 3e-075
gb|CF488060.1|CF488060 POL1_47_C02.g1_A002 Pollen Sorghum b... 282 8e-075
gb|CW160106.1|CW160106 104_566_11149707_148_36427_008 Sorgh... 266 3e-074
gb|CF487334.1|CF487334 POL1_43_D12.b1_A002 Pollen Sorghum b... 274 3e-072
gb|BH246023.1|BH246023 pSB1633.1 S. bicolor BTx623 PstI-dig... 270 4e-071
gb|CF489185.1|CF489185 POL1_55_F02.b1_A002 Pollen Sorghum b... 270 4e-071
gb|CF488665.1|CF488665 POL1_51_A10.g1_A002 Pollen Sorghum b... 224 8e-071
gb|CF486033.1|CF486033 POL1_35_F09.b1_A002 Pollen Sorghum b... 265 1e-069
gb|CF485801.1|CF485801 POL1_33_F06.g1_A002 Pollen Sorghum b... 255 1e-069
gb|CL155265.1|CL155265 104_341_10782005_114_31471_101 Sorgh... 263 6e-069
gb|CL187601.1|CL187601 104_403_10901000_114_32460_026 Sorgh... 247 8e-068
gb|BG412065.1|BG412065 OV2_37_E12.b1_A002 Ovary 2 (OV2) Sor... 259 8e-068
gb|CW463315.1|CW463315 fsbb001f211n16k0 Sorghum methylation... 259 1e-067
gb|BG411749.1|BG411749 OV2_37_E12.g1_A002 Ovary 2 (OV2) Sor... 258 2e-067
gb|CF485728.1|CF485728 POL1_33_F06.b1_A002 Pollen Sorghum b... 255 1e-066
gb|CF489342.1|CF489342 POL1_57_B05.b1_A002 Pollen Sorghum b... 253 4e-066
gb|CW494638.1|CW494638 fsbb001f286a15k0 Sorghum methylation... 187 2e-064
gb|CF483650.1|CF483650 POL1_23_F06.g1_A002 Pollen Sorghum b... 236 6e-061
gb|CF486111.1|CF486111 POL1_35_F09.g1_A002 Pollen Sorghum b... 221 2e-060
gb|CL165002.1|CL165002 104_359_10808294_114_31816_278 Sorgh... 232 8e-060
gb|CW446664.1|CW446664 fsbb001f179g22f0 Sorghum methylation... 232 8e-060
gb|CW217188.1|CW217188 104_650_11195523_116_37129_010 Sorgh... 190 2e-059
gb|CF481344.1|CF481344 POL1_71_A04.g1_A002 Pollen Sorghum b... 228 2e-058
gb|CF490015.1|CF490015 POL1_62_A05.b1_A002 Pollen Sorghum b... 150 5e-058
gb|CW406843.1|CW406843 fsbb001f100a22k0 Sorghum methylation... 143 1e-057
gb|CF484527.1|CF484527 POL1_25_H01.g1_A002 Pollen Sorghum b... 216 6e-055
gb|CW043621.1|CW043621 104_279_10508479_114_30273 Sorghum m... 215 1e-054
gb|CW097817.1|CW097817 104_464_11002670_148_34365_061 Sorgh... 213 5e-054
gb|CW245686.1|CW245686 104_706_11221077_148_35074_085 Sorgh... 213 5e-054
gb|CW245687.1|CW245687 104_706_11221077_148_37594_085 Sorgh... 212 1e-053
gb|BZ422085.1|BZ422085 id49d07.b1 WGS-SbicolorF (DH5a methy... 211 2e-053
gb|CF480188.1|CF480188 POL1_64_G01.b1_A002 Pollen Sorghum b... 211 3e-053
gb|CW390139.1|CW390139 fsbb001f075k21k0 Sorghum methylation... 197 1e-052
gb|CW237483.1|CW237483 104_693_11216193_148_37517_033 Sorgh... 204 4e-051
gb|CF484792.1|CF484792 POL1_27_B10.g1_A002 Pollen Sorghum b... 204 4e-051
gb|CF481389.1|CF481389 POL1_71_E06.g1_A002 Pollen Sorghum b... 136 5e-051
gb|CL196651.1|CL196651 104_423_10943198_116_32330_063 Sorgh... 198 2e-049
gb|CF480656.1|CF480656 POL1_67_D01.b1_A002 Pollen Sorghum b... 127 1e-048
gb|CW039367.1|CW039367 104_272_10505460_115_30390 Sorghum m... 195 2e-048
gb|CF484989.1|CF484989 POL1_28_F08.g1_A002 Pollen Sorghum b... 194 2e-048
gb|CL197000.1|CL197000 104_423_10943444_116_32330_070 Sorgh... 193 4e-048
gb|CF486155.1|CF486155 POL1_36_C04.b1_A002 Pollen Sorghum b... 193 6e-048
gb|BG239833.1|BG239833 OV1_29_F03.g1_A002 Ovary 1 (OV1) Sor... 190 6e-047
gb|BG240402.1|BG240402 OV1_29_F03.b1_A002 Ovary 1 (OV1) Sor... 190 6e-047
gb|CW401940.1|CW401940 fsbb001f093a03f0 Sorghum methylation... 96 8e-046
gb|CF490094.1|CF490094 POL1_62_A05.g1_A002 Pollen Sorghum b... 108 3e-044
gb|CF486235.1|CF486235 POL1_36_C04.g1_A002 Pollen Sorghum b... 180 4e-044
gb|CL196650.1|CL196650 104_423_10943198_114_32326_063 Sorgh... 150 1e-042
gb|CW346335.1|CW346335 104_849_11488970_116_36220_003 Sorgh... 174 3e-042
gb|CF483278.1|CF483278 POL1_21_D07.b1_A002 Pollen Sorghum b... 114 3e-042
gb|CW260257.1|CW260257 104_726_11228865_148_35188_033 Sorgh... 161 1e-041
gb|CF489718.1|CF489718 POL1_59_F04.b1_A002 Pollen Sorghum b... 122 2e-041
gb|BG739374.1|BG739374 EM1_82_B09.g1_A002 Embryo 1 (EM1) So... 103 2e-040
gb|CW146925.1|CW146925 104_540_11139246_148_34995_031 Sorgh... 168 2e-040
gb|CF480280.1|CF480280 POL1_64_G01.g1_A002 Pollen Sorghum b... 99 4e-040
gb|CW194908.1|CW194908 104_618_11180352_148_36800_092 Sorgh... 118 6e-040
gb|CW145709.1|CW145709 104_538_11138608_148_34981_058 Sorgh... 118 1e-039
gb|CF489851.1|CF489851 POL1_61_B02.b1_A002 Pollen Sorghum b... 165 2e-039
gb|CF481307.1|CF481307 POL1_71_E06.b1_A002 Pollen Sorghum b... 162 1e-038
gb|BI098442.1|BI098442 IP1_32_D12.b1_A002 Immature pannicle... 141 2e-038
gb|CF485402.1|CF485402 POL1_31_G04.b1_A002 Pollen Sorghum b... 160 4e-038
gb|CF489359.1|CF489359 POL1_57_D04.b1_A002 Pollen Sorghum b... 160 4e-038
gb|CF481701.1|CF481701 POL1_73_B09.g1_A002 Pollen Sorghum b... 143 4e-038
gb|CL191437.1|CL191437 104_410_10906802_116_32537_007 Sorgh... 138 5e-038
gb|CW036659.1|CW036659 104_268_10503899_114_30381 Sorghum m... 159 1e-037
gb|CF480663.1|CF480663 POL1_67_D09.b1_A002 Pollen Sorghum b... 159 1e-037
gb|CF487982.1|CF487982 POL1_47_C02.b1_A002 Pollen Sorghum b... 159 1e-037
gb|CF488593.1|CF488593 POL1_51_A10.b1_A002 Pollen Sorghum b... 159 1e-037
gb|CW102281.1|CW102281 104_470_11011256_148_34413_024 Sorgh... 146 2e-037
gb|CW231979.1|CW231979 104_681_11211414_148_37350_023 Sorgh... 118 2e-037
gb|CF481619.1|CF481619 POL1_73_B09.b1_A002 Pollen Sorghum b... 158 3e-037
gb|CW070897.1|CW070897 104_323_10591301_114_30471 Sorghum m... 100 4e-037
gb|CD213604.1|CD213604 HS1_52_B12.b1_A012 Heat-shocked seed... 95 4e-037
gb|CD462003.1|CD462003 SA1_36_H06.b1_A002 Salicylic acid-tr... 95 4e-037
gb|BE597262.1|BE597262 PI1_70_B02.g1_A002 Pathogen induced ... 95 4e-037
gb|BG739541.1|BG739541 EM1_82_B09.b1_A002 Embryo 1 (EM1) So... 148 4e-037
gb|CW072343.1|CW072343 104_325_10592215_116_30539 Sorghum m... 155 1e-036
gb|CF485486.1|CF485486 POL1_31_G04.g1_A002 Pollen Sorghum b... 155 1e-036
gb|CF481930.1|CF481930 POL1_75_E11.b1_A002 Pollen Sorghum b... 153 6e-036
gb|CF481916.1|CF481916 POL1_75_D02.b1_A002 Pollen Sorghum b... 152 1e-035
gb|CW197885.1|CW197885 104_622_11181920_148_36831_026 Sorgh... 151 3e-035
gb|CW333142.1|CW333142 104_831_11481784_116_36045_064 Sorgh... 103 2e-034
gb|CW264408.1|CW264408 104_733_11231276_116_35256_078 Sorgh... 120 2e-034
gb|CF486365.1|CF486365 POL1_37_F12.b1_A002 Pollen Sorghum b... 147 4e-034
gb|BI098131.1|BI098131 IP1_32_D12.g1_A002 Immature pannicle... 95 1e-033
gb|CW231978.1|CW231978 104_681_11211414_116_37346_023 Sorgh... 96 2e-033
gb|CW181409.1|CW181409 104_596_11163492_116_36654_042 Sorgh... 127 2e-033
gb|CF482926.1|CF482926 POL1_10_C07.b1_A002 Pollen Sorghum b... 141 2e-033
gb|BZ422208.1|BZ422208 id51a01.b1 WGS-SbicolorF (DH5a methy... 144 3e-033
gb|BG323126.1|BG323126 EM1_15_B11.g1_A002 Embryo 1 (EM1) So... 144 3e-033
gb|CL175907.1|CL175907 104_381_10892772_116_31765_372 Sorgh... 75 1e-032
gb|CW320260.1|CW320260 104_813_11474922_116_35901_077 Sorgh... 98 1e-032
gb|CF481266.1|CF481266 POL1_71_A04.b1_A002 Pollen Sorghum b... 115 2e-032
gb|CL175908.1|CL175908 104_381_10892772_148_31764_372 Sorgh... 80 3e-032
gb|CW191731.1|CW191731 104_613_11178652_148_36941_002 Sorgh... 80 3e-032
gb|CW369343.1|CW369343 fsbb001f043l11k0 Sorghum methylation... 139 8e-032
gb|CW072348.1|CW072348 104_325_10592218_114_30536 Sorghum m... 75 2e-031
gb|CD212571.1|CD212571 HS1_6_F12.b1_A012 Heat-shocked seedl... 95 1e-030
gb|CL149388.1|CL149388 104_330_10777794_116_31354_114 Sorgh... 121 6e-030
gb|CW463314.1|CW463314 fsbb001f211n16f0 Sorghum methylation... 98 1e-029
gb|CF480287.1|CF480287 POL1_64_G08.g1_A002 Pollen Sorghum b... 84 1e-029
gb|CW346939.1|CW346939 fsbb001f006k08f0 Sorghum methylation... 119 2e-029
gb|CW299046.1|CW299046 104_781_11462903_116_35658_082 Sorgh... 119 2e-029
gb|CW323365.1|CW323365 104_817_11476592_116_35962_024 Sorgh... 130 5e-029
gb|CW406842.1|CW406842 fsbb001f100a22f0 Sorghum methylation... 117 8e-029
gb|CW299047.1|CW299047 104_781_11462903_148_35654_082 Sorgh... 116 1e-028
gb|CW030834.1|CW030834 104_259_10500452_116_30398 Sorghum m... 84 3e-028
gb|CW086368.1|CW086368 104_430_10946932_116_33018_012 Sorgh... 79 4e-027
gb|CF481975.1|CF481975 POL1_75_D02.g1_A002 Pollen Sorghum b... 124 4e-027
gb|CW194907.1|CW194907 104_618_11180352_116_36796_092 Sorgh... 74 5e-027
gb|CF430289.1|CF430289 PH1_27_G01.b1_A002 Phosphorous-defic... 68 7e-027
gb|CW217189.1|CW217189 104_650_11195523_148_37130_010 Sorgh... 114 9e-027
gb|CW181410.1|CW181410 104_596_11163492_148_36653_042 Sorgh... 70 1e-026
gb|CW241737.1|CW241737 104_701_11218937_116_37555_079 Sorgh... 121 3e-026
gb|CW032166.1|CW032166 104_261_10501225_114_30363 Sorghum m... 120 5e-026
gb|CW232350.1|CW232350 104_685_11212772_116_37364_080 Sorgh... 95 6e-026
gb|CW461512.1|CW461512 fsbb001f209d11f0 Sorghum methylation... 119 1e-025
gb|CW394746.1|CW394746 fsbb001f082h21k0 Sorghum methylation... 119 1e-025
gb|CF481922.1|CF481922 POL1_75_D09.b1_A002 Pollen Sorghum b... 118 2e-025
gb|CW208653.1|CW208653 104_638_11188789_148_36982_059 Sorgh... 117 5e-025
gb|CW233309.1|CW233309 104_686_11213332_148_37371_008 Sorgh... 117 5e-025
gb|CW320261.1|CW320261 104_813_11474922_148_35897_077 Sorgh... 71 1e-024
gb|CW133225.1|CW133225 104_516_11116645_116_34806_049 Sorgh... 106 1e-024
gb|CW412966.1|CW412966 fsbb001f108o03f0 Sorghum methylation... 55 2e-024
gb|CW473599.1|CW473599 fsbb001f229a17k0 Sorghum methylation... 75 5e-024
gb|CW390138.1|CW390138 fsbb001f075k21f0 Sorghum methylation... 84 2e-022
gb|BG240550.1|BG240550 OV1_31_D01.b1_A002 Ovary 1 (OV1) Sor... 105 3e-021
gb|CW215045.1|CW215045 104_647_11194336_148_37163_060 Sorgh... 65 6e-021
>gb|CW330184.1|CW330184 104_827_11480239_148_36008_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480239, DNA
sequence
Length = 729
Score = 490 bits (1065), Expect = e-137
Identities = 201/230 (87%), Positives = 214/230 (93%)
Frame = -3 / +2
Query: 946 FFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSK 767
FFHLNIF KNVLIDKVTVKAPG+SPNTDGIH+GDS NVTIS TTIGVGDDCISIGPGSK
Sbjct: 2 FFHLNIFASKNVLIDKVTVKAPGNSPNTDGIHMGDSENVTISGTTIGVGDDCISIGPGSK 181
Query: 766 MIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKA 587
IRI GVKCGPGHGISVGSLGRYKDEKDVEDV+V GCT+ GTTNGLRIKSYEDSKSS K
Sbjct: 182 TIRIDGVKCGPGHGISVGSLGRYKDEKDVEDVKVKGCTLVGTTNGLRIKSYEDSKSSPKV 361
Query: 586 SKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLN 407
+KF+YE +TMDNVSYPIIIDQKYCPNNICV+SGASKVAV DVVFKNIHGTSNTPEAITLN
Sbjct: 362 TKFVYEDVTMDNVSYPIIIDQKYCPNNICVRSGASKVAVTDVVFKNIHGTSNTPEAITLN 541
Query: 406 CANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELACI*TN 257
CA+NLPCQGVQL NVDIKYN S NKTMAVCKNA+GKS GL+KELACI*++
Sbjct: 542 CADNLPCQGVQLHNVDIKYNKSNNKTMAVCKNAVGKSFGLSKELACI*SS 691
Score = 379 bits (821), Expect = e-104
Identities = 165/233 (70%), Positives = 175/233 (75%)
Frame = +3 / -1
Query: 249 VSQLVQMQASSFAKPMDLPMAFLQTAMVLLPDPLYLMSTLTSCTPWHGRLLAQLSVMASG 428
V +QM ASSF KP DLP AFLQTAMVLL D LYLMSTL SCTPWHGRL AQLSVMASG
Sbjct: 699 VGSELQMHASSFDKPKDLPTAFLQTAMVLLLDLLYLMSTLWSCTPWHGRLSAQLSVMASG 520
Query: 429 VLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDLE 608
VLEVPWMFLKTTS+TATL+APDLTQML GQYFWSMM+G ETLSMV SY NL+ L DDLE
Sbjct: 519 VLEVPWMFLKTTSVTATLDAPDLTQMLFGQYFWSMMIGYETLSMVTSSYTNLVTLGDDLE 340
Query: 609 SSYDLMRRPFVVPAIVHPVTCXXXXXXXXXXXXXXXXXMPWPGPHLTPWMRIILLPGPME 788
SSYDLMRRP VVP V P T MPWPGPHLTP +RI+LLPGPME
Sbjct: 339 SSYDLMRRPLVVPTSVQPFTFTSSTSFSSLYLPRLPTLMPWPGPHLTPSIRIVLLPGPME 160
Query: 789 MQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTLSISTFLHSKMLRWKN 947
MQSS ESPMW+PSVLGL PGA TVTLSI+TFL +KMLRWKN
Sbjct: 159 MQSSPTPMVVPLMVTFSESPMWIPSVLGLFPGAFTVTLSINTFLLAKMLRWKN 1
Score = 131 bits (281), Expect(3) = 3e-047
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = -2 / +1
Query: 452 EHPRHLQHAGGHHAQLRQQPAMPGRAARQRRHQVQWIRQQDHGRLQERHRQVHRLGKGAR 273
EHPRHLQHA GHHAQLR+QPAMPGRAA QRRHQVQ ++QQDHGRLQER RQV RL KGAR
Sbjct: 496 EHPRHLQHARGHHAQLRRQPAMPGRAAPQRRHQVQQVQQQDHGRLQERRRQVLRLVKGAR 675
Query: 272 LHL 264
+HL
Sbjct: 676 VHL 684
Score = 128 bits (275), Expect(2) = 5e-042
Identities = 57/65 (87%), Positives = 59/65 (90%)
Frame = +2 / -3
Query: 263 SDAGELLCQADGLADGVLADGHGLVAGSIVLDVDVDELHALAWQVVGAVERDGLRRVGGA 442
SDA ELL QA+GLADGVLADGHGLV G +VLDVDV ELHALAWQVVGAVERDGL RVGGA
Sbjct: 685 SDARELL*QAEGLADGVLADGHGLVVGLVVLDVDVVELHALAWQVVGAVERDGLGRVGGA 506
Query: 443 VDVLE 457
VDVLE
Sbjct: 505 VDVLE 491
Score = 65.2 bits (136), Expect(2) = 5e-042
Identities = 25/35 (71%), Positives = 26/35 (74%)
Frame = +1 / -2
Query: 553 CPW*CPRTGTCWP*ATTWSPRTT*CAGRSWCRRSC 657
CPW PRT T P ATTWSPRTT*CAGR WC +C
Sbjct: 395 CPWSRPRTRTW*PWATTWSPRTT*CAGRWWCPPAC 291
Score = 64.8 bits (135), Expect(3) = 3e-047
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = -2 / +1
Query: 659 VHDRRHHERPAHQVVRGLQVVAQGQQVPVRXXXXXXXXXXXXHRPEVLP 513
+H HH+RPAHQVVRGLQVVAQG QV VR HRPEVLP
Sbjct: 289 LHAGGHHQRPAHQVVRGLQVVAQGHQVRVRGRDHGQRLVPDHHRPEVLP 435
Score = 39.1 bits (79), Expect(3) = 3e-047
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / +1
Query: 947 VLPPQHLRVQERADRQSD 894
VLPPQHLR QER DRQ D
Sbjct: 1 VLPPQHLREQERVDRQGD 54
>gb|CW182308.1|CW182308 104_597_11164002_116_36658_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164002, DNA
sequence
Length = 608
Score = 437 bits (949), Expect = e-121
Identities = 179/202 (88%), Positives = 188/202 (93%)
Frame = -3 / +2
Query: 946 FFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSK 767
FFHLNIF KNVLIDKVTVKAPG+SPNTDGIH+GDS NVTIS TTIGVGDDCISIGPGSK
Sbjct: 2 FFHLNIFASKNVLIDKVTVKAPGNSPNTDGIHMGDSENVTISGTTIGVGDDCISIGPGSK 181
Query: 766 MIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKA 587
IRI GVKCGPGHGISVGSLGRYKDEKDVEDV+V GCT+ GTTNGLRIKSYEDSKSS K
Sbjct: 182 TIRIDGVKCGPGHGISVGSLGRYKDEKDVEDVKVKGCTLVGTTNGLRIKSYEDSKSSPKV 361
Query: 586 SKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLN 407
+KF+YE +TMDNVSYPIIIDQKYCPNNICV+SGASKVAV DVVFKNIHGTSNTPEAITLN
Sbjct: 362 TKFVYEDVTMDNVSYPIIIDQKYCPNNICVRSGASKVAVTDVVFKNIHGTSNTPEAITLN 541
Query: 406 CANNLPCQGVQLVNVDIKYNGS 341
CA+NLPCQGVQL NVDIKYN S
Sbjct: 542 CADNLPCQGVQLHNVDIKYNKS 607
Score = 334 bits (724), Expect = 2e-090
Identities = 143/202 (70%), Positives = 152/202 (75%)
Frame = +3 / -3
Query: 342 DPLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQY 521
D LYLMSTL SCTPWHGRL AQLSVMASGVLEVPWMFLKTTS+TATL+APDLTQML GQY
Sbjct: 606 DLLYLMSTLWSCTPWHGRLSAQLSVMASGVLEVPWMFLKTTSVTATLDAPDLTQMLFGQY 427
Query: 522 FWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRRPFVVPAIVHPVTCXXXXXXXXXX 701
FWSMM+G ETLSMV SY NL+ L DDLESSYDLMRRP VVP V P T
Sbjct: 426 FWSMMIGYETLSMVTSSYTNLVTLGDDLESSYDLMRRPLVVPTSVQPFTFTSSTSFSSLY 247
Query: 702 XXXXXXXMPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSP 881
MPWPGPHLTP +RI+LLPGPMEMQSS ESPMW+PSVLGL P
Sbjct: 246 LPRLPTLMPWPGPHLTPSIRIVLLPGPMEMQSSPTPMVVPLMVTFSESPMWIPSVLGLFP 67
Query: 882 GALTVTLSISTFLHSKMLRWKN 947
GA TVTLSI+TFL +KMLRWKN
Sbjct: 66 GAFTVTLSINTFLLAKMLRWKN 1
Score = 83.5 bits (176), Expect(3) = 3e-033
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = -2 / +1
Query: 452 EHPRHLQHAGGHHAQLRQQPAMPGRAARQRRHQVQWI 342
EHPRHLQHA GHHAQLR+QPAMPGRAA QRRHQVQ +
Sbjct: 496 EHPRHLQHARGHHAQLRRQPAMPGRAAPQRRHQVQQV 606
Score = 81.3 bits (171), Expect(2) = 7e-028
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +2 / -2
Query: 341 GSIVLDVDVDELHALAWQVVGAVERDGLRRVGGAVDVLE 457
G +VLDVDV ELHALAWQVVGAVERDGL RVGGAVDVLE
Sbjct: 607 GLVVLDVDVVELHALAWQVVGAVERDGLGRVGGAVDVLE 491
Score = 65.2 bits (136), Expect(2) = 7e-028
Identities = 25/35 (71%), Positives = 26/35 (74%)
Frame = +1 / -1
Query: 553 CPW*CPRTGTCWP*ATTWSPRTT*CAGRSWCRRSC 657
CPW PRT T P ATTWSPRTT*CAGR WC +C
Sbjct: 395 CPWSRPRTRTW*PWATTWSPRTT*CAGRWWCPPAC 291
Score = 64.8 bits (135), Expect(3) = 3e-033
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = -2 / +1
Query: 659 VHDRRHHERPAHQVVRGLQVVAQGQQVPVRXXXXXXXXXXXXHRPEVLP 513
+H HH+RPAHQVVRGLQVVAQG QV VR HRPEVLP
Sbjct: 289 LHAGGHHQRPAHQVVRGLQVVAQGHQVRVRGRDHGQRLVPDHHRPEVLP 435
Score = 39.1 bits (79), Expect(3) = 3e-033
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / +1
Query: 947 VLPPQHLRVQERADRQSD 894
VLPPQHLR QER DRQ D
Sbjct: 1 VLPPQHLREQERVDRQGD 54
>gb|CW330183.1|CW330183 104_827_11480239_116_36007_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480239, DNA
sequence
Length = 728
Score = 420 bits (911), Expect(2) = e-117
Identities = 174/209 (83%), Positives = 186/209 (88%)
Frame = -3 / -2
Query: 883 PGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLG 704
P + P GDS NVTIS TTIGVGDDCISIGPGSK IRI GVKCGPGHGISVGSLG
Sbjct: 712 PREQPQHGRNPHGDSENVTISGTTIGVGDDCISIGPGSKTIRIDGVKCGPGHGISVGSLG 533
Query: 703 RYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQ 524
RYKDEKDVEDV+V GCT+ GTTNGLRIKSYEDSKSS K +KF+YE +TMDNVSYPIIIDQ
Sbjct: 532 RYKDEKDVEDVKVKGCTLVGTTNGLRIKSYEDSKSSPKVTKFVYEDVTMDNVSYPIIIDQ 353
Query: 523 KYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
KYCPNNICV+SGASKVAV DVVFKNIHGTSNTPEAITLNCA+NLPCQGVQL NVDIKYN
Sbjct: 352 KYCPNNICVRSGASKVAVTDVVFKNIHGTSNTPEAITLNCADNLPCQGVQLHNVDIKYNK 173
Query: 343 SGNKTMAVCKNAIGKSIGLAKELACI*TN 257
S NKTMAVCKNA+GKS GL+KELACI*++
Sbjct: 172 SNNKTMAVCKNAVGKSFGLSKELACI*SS 86
Score = 315 bits (682), Expect = 1e-084
Identities = 140/208 (67%), Positives = 147/208 (70%)
Frame = +3 / +3
Query: 261 VQMQASSFAKPMDLPMAFLQTAMVLLPDPLYLMSTLTSCTPWHGRLLAQLSVMASGVLEV 440
+QM ASSF KP DLP AFLQTAMVLL D LYLMSTL SCTPWHGRL AQLSVMASGVLEV
Sbjct: 90 LQMHASSFDKPKDLPTAFLQTAMVLLLDLLYLMSTLWSCTPWHGRLSAQLSVMASGVLEV 269
Query: 441 PWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYD 620
PWMFLKTTS+TATL+APDLTQML GQYFWSMM+G ETLSMV SY NL+ L DDLESSYD
Sbjct: 270 PWMFLKTTSVTATLDAPDLTQMLFGQYFWSMMIGYETLSMVTSSYTNLVTLGDDLESSYD 449
Query: 621 LMRRPFVVPAIVHPVTCXXXXXXXXXXXXXXXXXMPWPGPHLTPWMRIILLPGPMEMQSS 800
LMRRP VVP V P T MPWPGPHLTP +RI+LLPGPMEMQSS
Sbjct: 450 LMRRPLVVPTSVQPFTFTSSTSFSSLYLPRLPTLMPWPGPHLTPSIRIVLLPGPMEMQSS 629
Query: 801 XXXXXXXXXXXXXESPMWMPSVLGLSPG 884
ESP G S G
Sbjct: 630 PTPMVVPLMVTFSESPCGFRPCWGCSRG 713
Score = 131 bits (281), Expect(3) = 8e-046
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = -2 / -1
Query: 452 EHPRHLQHAGGHHAQLRQQPAMPGRAARQRRHQVQWIRQQDHGRLQERHRQVHRLGKGAR 273
EHPRHLQHA GHHAQLR+QPAMPGRAA QRRHQVQ ++QQDHGRLQER RQV RL KGAR
Sbjct: 281 EHPRHLQHARGHHAQLRRQPAMPGRAAPQRRHQVQQVQQQDHGRLQERRRQVLRLVKGAR 102
Query: 272 LHL 264
+HL
Sbjct: 101 VHL 93
Score = 128 bits (275), Expect(3) = 1e-044
Identities = 57/65 (87%), Positives = 59/65 (90%)
Frame = +2 / +2
Query: 263 SDAGELLCQADGLADGVLADGHGLVAGSIVLDVDVDELHALAWQVVGAVERDGLRRVGGA 442
SDA ELL QA+GLADGVLADGHGLV G +VLDVDV ELHALAWQVVGAVERDGL RVGGA
Sbjct: 92 SDARELL*QAEGLADGVLADGHGLVVGLVVLDVDVVELHALAWQVVGAVERDGLGRVGGA 271
Query: 443 VDVLE 457
VDVLE
Sbjct: 272 VDVLE 286
Score = 65.2 bits (136), Expect(3) = 1e-044
Identities = 25/35 (71%), Positives = 26/35 (74%)
Frame = +1 / +1
Query: 553 CPW*CPRTGTCWP*ATTWSPRTT*CAGRSWCRRSC 657
CPW PRT T P ATTWSPRTT*CAGR WC +C
Sbjct: 382 CPWSRPRTRTW*PWATTWSPRTT*CAGRWWCPPAC 486
Score = 64.8 bits (135), Expect(3) = 8e-046
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = -2 / -1
Query: 659 VHDRRHHERPAHQVVRGLQVVAQGQQVPVRXXXXXXXXXXXXHRPEVLP 513
+H HH+RPAHQVVRGLQVVAQG QV VR HRPEVLP
Sbjct: 488 LHAGGHHQRPAHQVVRGLQVVAQGHQVRVRGRDHGQRLVPDHHRPEVLP 342
Score = 34.1 bits (68), Expect(3) = 8e-046
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -3 / -3
Query: 889 KAPGDSPNTDGIHIG 845
+ PG+SPNTDGIH+G
Sbjct: 717 EGPGNSPNTDGIHMG 673
Score = 32.2 bits (64), Expect(3) = 1e-044
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3 / +2
Query: 846 PMWMPSVLGLSPG 884
PMW+PSVLGL PG
Sbjct: 674 PMWIPSVLGLFPG 712
Score = 24.4 bits (47), Expect(2) = e-117
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / -1
Query: 901 KVTVKAPGDSP 869
KVTVKAPG +P
Sbjct: 728 KVTVKAPGTAP 696
>gb|CW271205.1|CW271205 104_743_11402872_116_35341_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402872, DNA
sequence
Length = 709
Score = 394 bits (854), Expect = e-108
Identities = 158/235 (67%), Positives = 185/235 (78%)
Frame = -3 / +3
Query: 1108 LSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGITLLNSKFFHLNI 929
L I G G +DGQG VWSKN C Y+CKILPNSLVLD+V N ++ GITLLN+KFFH+N+
Sbjct: 3 LVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNV 182
Query: 928 FECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHG 749
F+CK++LI VTV APGDSPNTDGIH+GDSS VTI +T IGVGDDCISIGPG+ + I G
Sbjct: 183 FQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVNITG 362
Query: 748 VKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYE 569
V CGPGHGIS+GSLGRYKDEKDV D+ V CT+ T+NGLRIK+YED+ S L ASK YE
Sbjct: 363 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYE 542
Query: 568 GITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNC 404
I M++ S PIIID KYCPN IC SGASKV DV FKN+ GTS +PEA++L C
Sbjct: 543 NIKMEDSSNPIIIDMKYCPNKICTASGASKVTRQDVSFKNVTGTSASPEAVSLLC 707
Score = 159 bits (342), Expect(2) = 9e-056
Identities = 71/129 (55%), Positives = 80/129 (62%)
Frame = +3 / -1
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTL 902
MPWPGPH+TP M +++PGPMEMQSS ESPMWMPSVLGLSPGA+TVT
Sbjct: 388 MPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTS 209
Query: 903 SISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGRILQL*ECWHWFLLHTRAPCPS 1082
I+ LH WKNL SSV+P T SST GRILQ H FLLHT PCPS
Sbjct: 208 LINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPS 29
Query: 1083 MVPWPLMDR 1109
P P++ R
Sbjct: 28 SFPLPVITR 2
Score = 80.3 bits (169), Expect(2) = 9e-056
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3 / -1
Query: 405 QLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSMVMPSYRNL 584
Q + ASG+ EVP FLK TS TLEAP Q+LLGQYF SM+MG + S++M S L
Sbjct: 706 QSRLTASGLAEVPVTFLKETS*RVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WIL 527
Query: 585 LALSDDLESSYDLMRRPFVV 644
A+S + SSY L+RRP +V
Sbjct: 526 EAVSTEAASSYALIRRPLLV 467
>gb|CF480740.1|CF480740 POL1_67_D01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_D01_A002 5', mRNA sequence
Length = 692
Score = 383 bits (831), Expect = e-105
Identities = 152/230 (66%), Positives = 180/230 (78%)
Frame = -3 / +2
Query: 1261 VIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTI 1082
+IP G+YL G L GPCK + I++DGNLL T DLS Y+ NWIEI V+NL I G G +
Sbjct: 2 LIPKGDYLVGPLNFTGPCKGDVTIQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKL 181
Query: 1081 DGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLID 902
DGQG VWSKN C Y+CKILPNSLVLD+V N ++ GITLLN+KFFH+N+F+CK++LI
Sbjct: 182 DGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIK 361
Query: 901 KVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGI 722
VTV APGDSPNTDGIH+GDSS VTI +T IGVGDDCISIGPG+ + I GV CGPGHGI
Sbjct: 362 DVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGI 541
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLY 572
S+GSLGRYKDEKDV D+ V CT+ T+NGLRIK+YED+ S L ASK Y
Sbjct: 542 SIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHY 691
Score = 170 bits (366), Expect(2) = 1e-042
Identities = 78/142 (54%), Positives = 87/142 (61%)
Frame = +3 / -3
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTL 902
MPWPGPH+TP M +++PGPMEMQSS ESPMWMPSVLGLSPGA+TVT
Sbjct: 540 MPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTS 361
Query: 903 SISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGRILQL*ECWHWFLLHTRAPCPS 1082
I+ LH WKNL SSV+P T SST GRILQ H FLLHT PCPS
Sbjct: 360 LINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPS 181
Query: 1083 MVPWPLMDRFSTFSISIQFLWY 1148
P P++ R ST ISIQ Y
Sbjct: 180 SFPLPVITRLSTRRISIQLPLY 115
Score = 25.4 bits (49), Expect(2) = 1e-042
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3 / -3
Query: 582 LLALSDDLESSYDLMRRPFVV 644
L A+S + SSY L+RRP +V
Sbjct: 681 LEAVSTEAASSYALIRRPLLV 619
>gb|CW309832.1|CW309832 104_798_11469399_116_35733_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469399, DNA
sequence
Length = 701
Score = 364 bits (789), Expect = 2e-099
Identities = 143/220 (65%), Positives = 171/220 (77%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIR 1187
DI++LGA GDGK DST + +AW +AC TG Q I+IP G+YL G L GPCK + I+
Sbjct: 40 DISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQ 219
Query: 1186 LDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNS 1007
+DGNLL T DLS Y+ NWIEI V+NL I G G +DGQG VWSKN C Y+CKILPNS
Sbjct: 220 VDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNS 399
Query: 1006 LVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVT 827
LVLD+V N ++ GITLLN+KFFH+N+F+CK++LI VTV APGDSPNTDGIH+GDSS VT
Sbjct: 400 LVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVT 579
Query: 826 ISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSL 707
I +T IGVGDDCISIGPG+ + I GV CGPGHGIS+GSL
Sbjct: 580 IENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISIGSL 699
Score = 164 bits (353), Expect(2) = 2e-049
Identities = 77/142 (54%), Positives = 86/142 (60%)
Frame = +3 / -1
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTL 902
MP PGPH+TP M +++PGPMEMQSS ESPMWMPSVLGLSPGA+TVT
Sbjct: 683 MPCPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTS 504
Query: 903 SISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGRILQL*ECWHWFLLHTRAPCPS 1082
I+ LH WKNL SSV+P T SST GRILQ H FLLHT PCPS
Sbjct: 503 LINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPS 324
Query: 1083 MVPWPLMDRFSTFSISIQFLWY 1148
P P++ R ST ISIQ Y
Sbjct: 323 SFPLPVITRLSTRRISIQLPLY 258
Score = 54.2 bits (112), Expect(2) = 2e-049
Identities = 28/53 (52%), Positives = 29/53 (54%)
Frame = +3 / -1
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLSDLPSPLAPSCAM 1364
L GP S P R* P GM I C PV HA HA VLS LPSP AP+ M
Sbjct: 200 LHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLM 42
>gb|CW241738.1|CW241738 104_701_11218937_148_37556_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218937, DNA
sequence
Length = 656
Score = 361 bits (783), Expect = 1e-098
Identities = 143/218 (65%), Positives = 173/218 (79%)
Frame = -3 / +1
Query: 949 KFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGS 770
KFFH+N+F+CK++LI VTV APGDSPNTDGIH+GDSS VTI +T IGVGDDCISIGPG+
Sbjct: 1 KFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPGT 180
Query: 769 KMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLK 590
+ I GV CGPGHGIS+GSLGRYKDEKDV D+ V CT+ T+NGLRIK+YED+ S L
Sbjct: 181 TKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLT 360
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITL 410
ASK YE I M++ S PIIID KYCPN IC SGASKV V DV FKN+ GTS +PEA++L
Sbjct: 361 ASKIHYENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSASPEAVSL 540
Query: 409 NCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKS 296
C++ +PC GV + NV ++Y+G NKTMAVC+NA G +
Sbjct: 541 LCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQNAKGSA 654
Score = 120 bits (256), Expect(2) = 2e-052
Identities = 63/115 (54%), Positives = 76/115 (66%)
Frame = +3 / -1
Query: 300 LPMAFLQTAMVLLPDPLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVPWMFLKTTSLTAT 479
LP+AF TAMVLL PLY TL+ TP G L Q + ASG+ EVP FLK TSLT T
Sbjct: 650 LPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPVTFLKETSLTVT 471
Query: 480 LEAPDLTQMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRRPFVV 644
LEAP Q+LLGQYF SM+MG + S++M S L A+S + SSY L+RRP +V
Sbjct: 470 LEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLV 306
Score = 108 bits (231), Expect(2) = 2e-052
Identities = 44/75 (58%), Positives = 50/75 (66%)
Frame = +3 / -1
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTL 902
MPWPGPH+TP M +++PGPMEMQSS ESPMWMPSVLGLSPGA+TVT
Sbjct: 227 MPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTS 48
Query: 903 SISTFLHSKMLRWKN 947
I+ LH WKN
Sbjct: 47 LINMSLHWNTFMWKN 3
>gb|CW309833.1|CW309833 104_798_11469399_148_35741_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469399, DNA
sequence
Length = 614
Score = 357 bits (773), Expect = 3e-097
Identities = 139/203 (68%), Positives = 164/203 (80%)
Frame = -3 / -3
Query: 1216 GPCKSSIIIRLDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQH 1037
GPCK + I++DGNLL T DLS Y+ NWIEI V+NL I G G +DGQG VWSKN C
Sbjct: 609 GPCKGDVTIQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAK 430
Query: 1036 SYNCKILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDG 857
Y+CKILPNSLVLD+V N ++ GITLLN+KFFH+N+F+CK++LI VTV APGDSPNTDG
Sbjct: 429 KYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDG 250
Query: 856 IHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVE 677
IH+GDSS VTI +T IGVGDDCISIGPG+ + I GV CGPGHGIS+GSLGRYKDEKDV
Sbjct: 249 IHMGDSSGVTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVT 70
Query: 676 DVQVTGCTIAGTTNGLRIKSYED 608
D+ V CT+ T+NGLRIK+YED
Sbjct: 69 DINVKDCTLKKTSNGLRIKAYED 1
Score = 170 bits (366), Expect = 5e-041
Identities = 78/142 (54%), Positives = 87/142 (61%)
Frame = +3 / +2
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTL 902
MPWPGPH+TP M +++PGPMEMQSS ESPMWMPSVLGLSPGA+TVT
Sbjct: 116 MPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTS 295
Query: 903 SISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGRILQL*ECWHWFLLHTRAPCPS 1082
I+ LH WKNL SSV+P T SST GRILQ H FLLHT PCPS
Sbjct: 296 LINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPS 475
Query: 1083 MVPWPLMDRFSTFSISIQFLWY 1148
P P++ R ST ISIQ Y
Sbjct: 476 SFPLPVITRLSTRRISIQLPLY 541
>gb|CL196999.1|CL196999 104_423_10943444_114_32326_070 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943444, DNA
sequence
Length = 699
Score = 348 bits (754), Expect = 1e-094
Identities = 142/207 (68%), Positives = 161/207 (77%)
Frame = -3 / +1
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
+LVLDF N + GITLLNSKFFH+N+F+CK V I VTV APGDSPNTDGIHIGDSS V
Sbjct: 61 TLVLDFCNNATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKV 240
Query: 829 TISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTI 650
TI+ TTIGVGDDCISIGPGS I + GV CGPGHGISVGSLGRYKDEKDV D+ V CT+
Sbjct: 241 TITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTL 420
Query: 649 AGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAV 470
T+NG+RIKSYED+ + ASK YE I MD+V+ PIIID KYCPN IC G SKV V
Sbjct: 421 KKTSNGVRIKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKICTAKGDSKVTV 600
Query: 469 NDVVFKNIHGTSNTPEAITLNCANNLP 389
DV FKNI GTS+TPEA++L C+ P
Sbjct: 601 KDVTFKNITGTSSTPEAVSLLCSEKSP 681
Score = 194 bits (418), Expect = 3e-048
Identities = 101/207 (48%), Positives = 115/207 (55%)
Frame = +3 / -2
Query: 390 GRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSMVMP 569
G Q + ASGV EVP MFL TSLT TLE+P Q+LLGQYF SMMMG T SM M
Sbjct: 680 GDFSEQSRLTASGVDEVPVMFLNVTSLTVTLESPLAVQILLGQYFMSMMMGLATSSMAMF 501
Query: 570 SYRNLLALSDDLESSYDLMRRPFVVPAIVHPVTCXXXXXXXXXXXXXXXXXMPWPGPHLT 749
S +L A+ SS DL+R P +V V +T MPWPGP +T
Sbjct: 500 S*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQVT 321
Query: 750 PWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTLSISTFLHSK 929
P I +LPGPMEMQSS ESPMWMPSVLGLSPGA+TVT I T LH
Sbjct: 320 PVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMPSVLGLSPGAVTVTSLIVTPLHWN 141
Query: 930 MLRWKNLLLSSVMPRIWTFVTKSSTKL 1010
WKNL S V+P + KSST +
Sbjct: 140 TFMWKNLEFSRVIPETVALLQKSSTNV 60
>gb|CW270778.1|CW270778 104_742_11402626_148_35337_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402626, DNA
sequence
Length = 671
Score = 345 bits (748), Expect = 1e-093
Identities = 141/202 (69%), Positives = 159/202 (78%)
Frame = -3 / +1
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
+LVLDF N + GITLLNSKFFH+N+F+CK V I VTV APGDSPNTDGIHIGDSS V
Sbjct: 64 TLVLDFCNNATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKV 243
Query: 829 TISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTI 650
TI+ TTIGVGDDCISIGPGS I + GV CGPGHGISVGSLGRYKDEKDV D+ V CT+
Sbjct: 244 TITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTL 423
Query: 649 AGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAV 470
T+NG+RIKSYED+ + ASK YE I MD+V+ PIIID KYCPN IC G SKV V
Sbjct: 424 KKTSNGVRIKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKICTAKGDSKVTV 603
Query: 469 NDVVFKNIHGTSNTPEAITLNC 404
DV FKNI GTS+TPEA++L C
Sbjct: 604 KDVTFKNITGTSSTPEAVSLLC 669
Score = 193 bits (417), Expect = 4e-048
Identities = 100/202 (49%), Positives = 114/202 (56%)
Frame = +3 / -1
Query: 405 QLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSMVMPSYRNL 584
Q + ASGV EVP MFL TSLT TLE+P Q+LLGQYF SMMMG T SM M S +L
Sbjct: 668 QSRLTASGVDEVPVMFLNVTSLTVTLESPLAVQILLGQYFMSMMMGLATSSMAMFS*WSL 489
Query: 585 LALSDDLESSYDLMRRPFVVPAIVHPVTCXXXXXXXXXXXXXXXXXMPWPGPHLTPWMRI 764
A+ SS DL+R P +V V +T MPWPGP +TP I
Sbjct: 488 EAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQVTPVTLI 309
Query: 765 ILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTLSISTFLHSKMLRWK 944
+LPGPMEMQSS ESPMWMPSVLGLSPGA+TVT I T LH WK
Sbjct: 308 PVLPGPMEMQSSPTPMVVPVMVTLEESPMWMPSVLGLSPGAVTVTSLIVTPLHWNTFMWK 129
Query: 945 NLLLSSVMPRIWTFVTKSSTKL 1010
NL S V+P + KSST +
Sbjct: 128 NLEFSRVIPETVALLQKSSTNV 63
>gb|CL155266.1|CL155266 104_341_10782005_116_31472_101 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782005, DNA
sequence
Length = 641
Score = 342 bits (742), Expect = 6e-093
Identities = 137/213 (64%), Positives = 162/213 (76%)
Frame = -3 / -3
Query: 1333 KSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDL 1154
K DST + +A +AC TG Q I+IP G YL G L GP K + I++DGNLL T DL
Sbjct: 639 KKDSTKAVQEA*TSACGGTGKQTILIPKGEYLVGPLNFTGPSKGDVTIQVDGNLLATTDL 460
Query: 1153 SAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQI 974
S Y+ NWIEI V+NL I G G +DGQG VWSKN C Y+CKILPNSLVLD+V N ++
Sbjct: 459 SQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEV 280
Query: 973 RGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDD 794
GITLLN+KFFH+N+F+CK++LI VTV APGDSPNTDGIH+GDSS VTI +T IGVGDD
Sbjct: 279 SGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDD 100
Query: 793 CISIGPGSKMIRIHGVKCGPGHGISVGSLGRYK 695
CISIGPG+ + I GV CGPGHGIS+GSLGRYK
Sbjct: 99 CISIGPGTTKVNITGVTCGPGHGISIGSLGRYK 1
Score = 170 bits (366), Expect(2) = 4e-046
Identities = 78/142 (54%), Positives = 87/142 (61%)
Frame = +3 / +2
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTL 902
MPWPGPH+TP M +++PGPMEMQSS ESPMWMPSVLGLSPGA+TVT
Sbjct: 29 MPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTS 208
Query: 903 SISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGRILQL*ECWHWFLLHTRAPCPS 1082
I+ LH WKNL SSV+P T SST GRILQ H FLLHT PCPS
Sbjct: 209 LINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPS 388
Query: 1083 MVPWPLMDRFSTFSISIQFLWY 1148
P P++ R ST ISIQ Y
Sbjct: 389 SFPLPVITRLSTRRISIQLPLY 454
Score = 37.3 bits (75), Expect(2) = 4e-046
Identities = 21/43 (48%), Positives = 21/43 (48%)
Frame = +3 / +2
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLSDL 1334
L GP S P R P GM I C PV HA HA VLS L
Sbjct: 512 LLGPVKLSGPTRYSPLGMRIVCFPVPPHADVHASCTAFVLSFL 640
>gb|CW323759.1|CW323759 104_818_11476800_148_35909_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476800, DNA
sequence
Length = 622
Score = 341 bits (740), Expect = 1e-092
Identities = 134/207 (64%), Positives = 159/207 (76%)
Frame = -3 / -2
Query: 1339 DGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTG 1160
DGK DST + +AW +AC TG Q I+IP G+YL G L GPCK + I++DGNLL T
Sbjct: 621 DGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQVDGNLLATT 442
Query: 1159 DLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNV 980
DLS Y+ NWIEI V+NL I G G +DGQG VWSKN C Y+CKILPNSLVLD+V N
Sbjct: 441 DLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNG 262
Query: 979 QIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVG 800
++ GITLLN+KFFH+N+F+CK++LI VTV APGDSPNTDGIH+GDSS VTI +T IGVG
Sbjct: 261 EVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVG 82
Query: 799 DDCISIGPGSKMIRIHGVKCGPGHGIS 719
DDCISIGPG+ + I GV CGPGHGIS
Sbjct: 81 DDCISIGPGTTKVNITGVTCGPGHGIS 1
Score = 170 bits (366), Expect(2) = 1e-048
Identities = 78/142 (54%), Positives = 87/142 (61%)
Frame = +3 / +2
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTL 902
MPWPGPH+TP M +++PGPMEMQSS ESPMWMPSVLGLSPGA+TVT
Sbjct: 5 MPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTS 184
Query: 903 SISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGRILQL*ECWHWFLLHTRAPCPS 1082
I+ LH WKNL SSV+P T SST GRILQ H FLLHT PCPS
Sbjct: 185 LINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPS 364
Query: 1083 MVPWPLMDRFSTFSISIQFLWY 1148
P P++ R ST ISIQ Y
Sbjct: 365 SFPLPVITRLSTRRISIQLPLY 430
Score = 45.5 bits (93), Expect(2) = 1e-048
Identities = 24/45 (53%), Positives = 24/45 (53%)
Frame = +3 / +2
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLSDLPS 1340
L GP S P R* P GM I C PV HA HA VLS LPS
Sbjct: 488 LHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPS 622
>gb|CF489422.1|CF489422 POL1_57_B05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_B05_A002 5', mRNA sequence
Length = 715
Score = 340 bits (736), Expect = 4e-092
Identities = 133/206 (64%), Positives = 159/206 (77%)
Frame = -3 / +2
Query: 1327 DSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLSA 1148
DST + +AW +AC TG Q I+IP G+YL G L GPCK + I++DGNLL T DLS
Sbjct: 98 DSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQVDGNLLATTDLSQ 277
Query: 1147 YQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRG 968
Y+ NWIEI V+NL I G G +DGQG VWSKN C Y+CKILPNSLVLD+V N ++ G
Sbjct: 278 YKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSG 457
Query: 967 ITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCI 788
ITLLN+KFFH+N+F+CK++LI VTV APGDSPNTDGIH+GDSS VTI +T IGVGDDCI
Sbjct: 458 ITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCI 637
Query: 787 SIGPGSKMIRIHGVKCGPGHGISVGS 710
SIGPG+ + I GV CGPGHGIS+GS
Sbjct: 638 SIGPGTTKVNITGVTCGPGHGISIGS 715
Score = 170 bits (366), Expect(2) = 5e-047
Identities = 78/142 (54%), Positives = 87/142 (61%)
Frame = +3 / -2
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTL 902
MPWPGPH+TP M +++PGPMEMQSS ESPMWMPSVLGLSPGA+TVT
Sbjct: 702 MPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTS 523
Query: 903 SISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGRILQL*ECWHWFLLHTRAPCPS 1082
I+ LH WKNL SSV+P T SST GRILQ H FLLHT PCPS
Sbjct: 522 LINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPS 343
Query: 1083 MVPWPLMDRFSTFSISIQFLWY 1148
P P++ R ST ISIQ Y
Sbjct: 342 SFPLPVITRLSTRRISIQLPLY 277
Score = 40.0 bits (81), Expect(2) = 5e-047
Identities = 21/41 (51%), Positives = 21/41 (51%)
Frame = +3 / -2
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLS 1328
L GP S P R* P GM I C PV HA HA VLS
Sbjct: 219 LHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLS 97
>gb|BZ423602.1|BZ423602 id51c01.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id51c01 5', DNA sequence
Length = 574
Score = 329 bits (712), Expect = 9e-089
Identities = 134/191 (70%), Positives = 149/191 (78%)
Frame = -3 / +1
Query: 997 DFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISS 818
DF N + GITLLNSKFFH+N+F+CK V I VTV APGDSPNTDGIHIGDSS VTI+
Sbjct: 1 DFCNNATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKVTITG 180
Query: 817 TTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTT 638
TTIGVGDDCISIGPGS I + GV CGPGHGISVGSLGRYKDEKDV D+ V CT+ T+
Sbjct: 181 TTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTLKKTS 360
Query: 637 NGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVV 458
NG+RIKSYED+ + ASK YE I MD+V+ PIIID KYCPN IC G SKV V DV
Sbjct: 361 NGVRIKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKICTAKGDSKVTVKDVT 540
Query: 457 FKNIHGTSNTP 425
FKNI GTS+TP
Sbjct: 541 FKNITGTSSTP 573
Score = 182 bits (393), Expect = 9e-045
Identities = 94/190 (49%), Positives = 106/190 (55%)
Frame = +3 / -3
Query: 426 GVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDL 605
GV EVP MFL TSLT TLE+P Q+LLGQYF SMMMG T SM M S +L A+
Sbjct: 572 GVDEVPVMFLNVTSLTVTLESPLAVQILLGQYFMSMMMGLATSSMAMFS*WSLEAVITHA 393
Query: 606 ESSYDLMRRPFVVPAIVHPVTCXXXXXXXXXXXXXXXXXMPWPGPHLTPWMRIILLPGPM 785
SS DL+R P +V V +T MPWPGP +TP I +LPGPM
Sbjct: 392 ASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQVTPVTLIPVLPGPM 213
Query: 786 EMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTLSISTFLHSKMLRWKNLLLSSV 965
EMQSS ESPMWMPSVLGLSPGA+TVT I T LH WKNL S V
Sbjct: 212 EMQSSPTPMVVPVMVTLEESPMWMPSVLGLSPGAVTVTSLIVTPLHWNTFMWKNLEFSRV 33
Query: 966 MPRIWTFVTK 995
+P + K
Sbjct: 32 IPETVALLQK 3
>gb|CW312481.1|CW312481 104_802_11470780_116_35783_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470780, DNA
sequence
Length = 675
Score = 328 bits (710), Expect = 2e-088
Identities = 129/199 (64%), Positives = 155/199 (77%)
Frame = -3 / -3
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIR 1187
DI++LGA GDGK DST + +AW +AC TG Q I+IP G+YL G L GPCK + I+
Sbjct: 598 DISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQ 419
Query: 1186 LDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNS 1007
+DGNLL T DLS Y+ NWIEI V+NL I G G +DGQG VWSKN C Y+CKILPNS
Sbjct: 418 VDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNS 239
Query: 1006 LVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVT 827
LVLD+V N ++ GITLLN+KFFH+N+F+CK++LI VTV APGDSPNTDGIH+GDSS VT
Sbjct: 238 LVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVT 59
Query: 826 ISSTTIGVGDDCISIGPGS 770
I +T IGVGDDCISIGPG+
Sbjct: 58 IENTVIGVGDDCISIGPGT 2
Score = 140 bits (301), Expect(2) = 2e-042
Identities = 68/126 (53%), Positives = 74/126 (58%)
Frame = +3 / +3
Query: 771 LPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTLSISTFLHSKMLRWKNL 950
+PGPMEMQSS ESPMWMPSVLGLSPGA+TVT I+ LH WKNL
Sbjct: 3 VPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNL 182
Query: 951 LLSSVMPRIWTFVTKSSTKLFGRILQL*ECWHWFLLHTRAPCPSMVPWPLMDRFSTFSIS 1130
SSV+P T SST GRILQ H FLLHT PCPS P P++ R ST IS
Sbjct: 183 AFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRIS 362
Query: 1131 IQFLWY 1148
IQ Y
Sbjct: 363 IQLPLY 380
Score = 54.2 bits (112), Expect(2) = 2e-042
Identities = 28/53 (52%), Positives = 29/53 (54%)
Frame = +3 / +3
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLSDLPSPLAPSCAM 1364
L GP S P R* P GM I C PV HA HA VLS LPSP AP+ M
Sbjct: 438 LHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLM 596
>gb|CF489932.1|CF489932 POL1_61_B02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_61_B02_A002 5', mRNA sequence
Length = 733
Score = 327 bits (709), Expect = 2e-088
Identities = 129/198 (65%), Positives = 154/198 (77%)
Frame = -3 / +2
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIR 1187
DI++LGA GDGK DST + +AW +AC TG Q I+IP G+YL G L GPCK + I+
Sbjct: 140 DISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQ 319
Query: 1186 LDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNS 1007
+DGNLL T DLS Y+ NWIEI V+NL I G G +DGQG VWSKN C Y+CKILPNS
Sbjct: 320 VDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNS 499
Query: 1006 LVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVT 827
LVLD+V N ++ GITLLN+KFFH+N+F+CK++LI VTV APGDSPNTDGIH+GDSS VT
Sbjct: 500 LVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVT 679
Query: 826 ISSTTIGVGDDCISIGPG 773
I +T IGVGDDCISIGPG
Sbjct: 680 IENTVIGVGDDCISIGPG 733
Score = 140 bits (300), Expect(2) = 3e-042
Identities = 68/125 (54%), Positives = 73/125 (58%)
Frame = +3 / -2
Query: 774 PGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTLSISTFLHSKMLRWKNLL 953
PGPMEMQSS ESPMWMPSVLGLSPGA+TVT I+ LH WKNL
Sbjct: 732 PGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLA 553
Query: 954 LSSVMPRIWTFVTKSSTKLFGRILQL*ECWHWFLLHTRAPCPSMVPWPLMDRFSTFSISI 1133
SSV+P T SST GRILQ H FLLHT PCPS P P++ R ST ISI
Sbjct: 552 FSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISI 373
Query: 1134 QFLWY 1148
Q Y
Sbjct: 372 QLPLY 358
Score = 54.2 bits (112), Expect(2) = 3e-042
Identities = 28/53 (52%), Positives = 29/53 (54%)
Frame = +3 / -2
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLSDLPSPLAPSCAM 1364
L GP S P R* P GM I C PV HA HA VLS LPSP AP+ M
Sbjct: 300 LHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLM 142
>gb|CF487417.1|CF487417 POL1_43_D12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_D12_A002 5', mRNA sequence
Length = 742
Score = 322 bits (697), Expect = 1e-086
Identities = 128/198 (64%), Positives = 153/198 (77%)
Frame = -3 / +2
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIR 1187
DI++LGA GDGK DST + +AW +A TG Q I+IP G+YL G L GPCK + I+
Sbjct: 149 DISKLGASGDGKKDSTKAVQEAWTSARGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQ 328
Query: 1186 LDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNS 1007
+DGNLL T DLS Y+ NWIEI V+NL I G G +DGQG VWSKN C Y+CKILPNS
Sbjct: 329 VDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNS 508
Query: 1006 LVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVT 827
LVLD+V N ++ GITLLN+KFFH+N+F+CK++LI VTV APGDSPNTDGIH+GDSS VT
Sbjct: 509 LVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVT 688
Query: 826 ISSTTIGVGDDCISIGPG 773
I +T IGVGDDCISIGPG
Sbjct: 689 IENTVIGVGDDCISIGPG 742
Score = 140 bits (300), Expect(2) = 4e-041
Identities = 68/125 (54%), Positives = 73/125 (58%)
Frame = +3 / -2
Query: 774 PGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTLSISTFLHSKMLRWKNLL 953
PGPMEMQSS ESPMWMPSVLGLSPGA+TVT I+ LH WKNL
Sbjct: 741 PGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLA 562
Query: 954 LSSVMPRIWTFVTKSSTKLFGRILQL*ECWHWFLLHTRAPCPSMVPWPLMDRFSTFSISI 1133
SSV+P T SST GRILQ H FLLHT PCPS P P++ R ST ISI
Sbjct: 561 FSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISI 382
Query: 1134 QFLWY 1148
Q Y
Sbjct: 381 QLPLY 367
Score = 50.6 bits (104), Expect(2) = 4e-041
Identities = 27/53 (50%), Positives = 28/53 (52%)
Frame = +3 / -2
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLSDLPSPLAPSCAM 1364
L GP S P R* P GM I C PV A HA VLS LPSP AP+ M
Sbjct: 309 LHGPVKLSGPTR*SPLGMRIVCFPVPPRADVHASCTAFVLSFLPSPEAPNLLM 151
>gb|CF482996.1|CF482996 POL1_10_C07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_10_C07_A002 5', mRNA sequence
Length = 768
Score = 184 bits (397), Expect(2) = 4e-086
Identities = 71/99 (71%), Positives = 85/99 (85%)
Frame = -3 / +3
Query: 1012 NSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSN 833
NSLVLD+V N ++ GITLLN+KFFH+N+F+CK++LI VTV APGDSPNTDGIH+GDSS
Sbjct: 471 NSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSG 650
Query: 832 VTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISV 716
VTI +T IGVGDDCISIGPG+ + I GV CGPGHGIS+
Sbjct: 651 VTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISI 767
Score = 156 bits (335), Expect(2) = 4e-086
Identities = 63/112 (56%), Positives = 76/112 (67%)
Frame = -3 / +3
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIR 1187
DI++LGA GDGK DST + +AW +AC TG Q I+IP G+YL G L GPCK + I+
Sbjct: 156 DISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQ 335
Query: 1186 LDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSY 1031
+DGNLL T DLS Y+ NWIEI V+NL I G G +DGQG VWSKN Y
Sbjct: 336 VDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSLVLDY 491
Score = 123 bits (263), Expect(3) = 3e-045
Identities = 54/97 (55%), Positives = 61/97 (62%)
Frame = +3 / -3
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTL 902
MPWPGPH+TP M +++PGPMEMQSS ESPMWMPSVLGLSPGA+TVT
Sbjct: 760 MPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTS 581
Query: 903 SISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLF 1013
I+ LH WKNL SSV+P T SST F
Sbjct: 580 LINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSEF 470
Score = 54.2 bits (112), Expect(3) = 3e-045
Identities = 28/53 (52%), Positives = 29/53 (54%)
Frame = +3 / -3
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLSDLPSPLAPSCAM 1364
L GP S P R* P GM I C PV HA HA VLS LPSP AP+ M
Sbjct: 316 LHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLM 158
Score = 45.5 bits (93), Expect(3) = 3e-045
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = +3 / -3
Query: 1050 FLLHTRAPCPSMVPWPLMDRFSTFSISIQFLWY 1148
FLLHT PCPS P P++ R ST ISIQ Y
Sbjct: 472 FLLHTAGPCPSSFPLPVITRLSTRRISIQLPLY 374
>gb|CW323366.1|CW323366 104_817_11476592_148_35963_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476592, DNA
sequence
Length = 680
Score = 249 bits (538), Expect(2) = 4e-086
Identities = 100/135 (74%), Positives = 112/135 (82%)
Frame = -3 / -3
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
+LVLDF N + GITLLNSKFFH+N+F+CK V I VTV APGDSPNTDGIHIGDSS V
Sbjct: 405 TLVLDFCNNATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKV 226
Query: 829 TISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTI 650
TI+ TTIGVGDDCISIGPGS I + GV CGPGHGISVGSLGRYKDEKDV D+ V CT+
Sbjct: 225 TITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTL 46
Query: 649 AGTTNGLRIKSYEDS 605
T+NG+RIKSYED+
Sbjct: 45 KKTSNGVRIKSYEDA 1
Score = 126 bits (270), Expect(2) = 2e-035
Identities = 62/134 (46%), Positives = 71/134 (52%)
Frame = +3 / +2
Query: 609 SSYDLMRRPFVVPAIVHPVTCXXXXXXXXXXXXXXXXXMPWPGPHLTPWMRIILLPGPME 788
SS DL+R P +V V +T MPWPGP +TP I +LPGPME
Sbjct: 5 SS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQVTPVTLIPVLPGPME 184
Query: 789 MQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTLSISTFLHSKMLRWKNLLLSSVM 968
MQSS ESPMWMPSVLGLSPGA+TVT I T LH WKNL S V+
Sbjct: 185 MQSSPTPMVVPVMVTLEESPMWMPSVLGLSPGAVTVTSLIVTPLHWNTFMWKNLEFSRVI 364
Query: 969 PRIWTFVTKSSTKL 1010
P + KSST +
Sbjct: 365 PETVALLQKSSTNV 406
Score = 91.8 bits (194), Expect(2) = 4e-086
Identities = 34/52 (65%), Positives = 41/52 (78%)
Frame = -3 / -3
Query: 1165 TGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPN 1010
T DLSAY+ NWIEIE+V+NL I+G GT+DGQG VW N+C Y+CKILPN
Sbjct: 678 TTDLSAYKTNWIEIEHVDNLVISGKGTLDGQGKQVWDNNKCAQKYDCKILPN 523
Score = 48.3 bits (99), Expect(2) = 2e-035
Identities = 22/36 (61%), Positives = 23/36 (63%)
Frame = +3 / +2
Query: 1044 HWFLLHTRAPCPSMVPWPLMDRFSTFSISIQFLWYA 1151
H L HT P PS VP PLM R ST SISIQ + YA
Sbjct: 557 HLLLSHTCLPWPSRVPLPLMTRLSTCSISIQLVLYA 664
>gb|CL187602.1|CL187602 104_403_10901000_116_32464_026 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10901000, DNA
sequence
Length = 712
Score = 241 bits (520), Expect(2) = 1e-084
Identities = 94/164 (57%), Positives = 121/164 (73%)
Frame = -3 / -3
Query: 991 VTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTT 812
VTN + GI LLNSKFFH+NI KN+ + V + APGD NTDG+H+G S+ V+I+++T
Sbjct: 710 VTNGTVSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKVSITNST 531
Query: 811 IGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNG 632
IG GDDCIS+GPGS + ++ + CGPG GIS+G LGRYKDEKDV DV V C + TTNG
Sbjct: 530 IGTGDDCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVLKKTTNG 351
Query: 631 LRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
+RIKSYED++S L AS +E I M+ V+ PIIIDQ +CP +C
Sbjct: 350 VRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVC 219
Score = 95.5 bits (202), Expect(2) = 1e-084
Identities = 38/69 (55%), Positives = 51/69 (73%)
Frame = -3 / -3
Query: 496 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVC 317
KS +S V V DV F+NI GTS+TP+AI+L C+ + PC GV L++V+++Y G NKTMAVC
Sbjct: 209 KSDSSHVIVKDVTFRNITGTSSTPQAISLLCSQSQPCSGVSLIDVNVEYAGKNNKTMAVC 30
Query: 316 KNAIGKSIG 290
NA G + G
Sbjct: 29 SNAKGTAKG 3
Score = 75.8 bits (159), Expect(3) = 2e-034
Identities = 36/90 (40%), Positives = 44/90 (48%)
Frame = +3 / +1
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTL 902
MP PGP + + LPGP EMQSS + P W PSV SPGA+ T
Sbjct: 442 MPCPGPQMMLFTMTPSLPGPTEMQSSPVPMVELVMLTLVDIPTWTPSVFSTSPGAVMFTS 621
Query: 903 SISTFLHSKMLRWKNLLLSSVMPRIWTFVT 992
F + +L WKNL LSS++P VT
Sbjct: 622 FTVMFFEASILMWKNLELSSLIPETVPLVT 711
Score = 58.8 bits (122), Expect(3) = 2e-034
Identities = 32/65 (49%), Positives = 37/65 (56%)
Frame = +3 / +1
Query: 291 PMDLPMAFLQTAMVLLPDPLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVPWMFLKTTSL 470
P+ +P+A L TAMVLL P Y T S TP HG Q +MA GV +VP M TSL
Sbjct: 4 PLAVPLALLHTAMVLLFLPAYSTFTSMSDTPLHGCDCEQSRLMACGVDDVPVMLRNVTSL 183
Query: 471 TATLE 485
T T E
Sbjct: 184 TMT*E 198
Score = 51.9 bits (107), Expect(3) = 2e-034
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +3 / +1
Query: 513 GQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRRPFVV 644
GQ +WSMMMG T S++M S A+S D SSYDLMR P VV
Sbjct: 232 GQKYWSMMMGFATSSILMFSKVRCDAVSTDSASSYDLMRTPLVV 363
>gb|BG322873.1|BG322873 EM1_15_B11.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 580
Score = 314 bits (681), Expect = 2e-084
Identities = 126/188 (67%), Positives = 147/188 (78%)
Frame = -3 / +1
Query: 898 VTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGIS 719
VTV APGDSPNTDGIHIGDSS VTI+ TTIGVGDDCISIGPGS I + GV CGPGHGIS
Sbjct: 16 VTVTAPGDSPNTDGIHIGDSSKVTITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGIS 195
Query: 718 VGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYP 539
VGSLGRYKDEKDV D+ V CT+ T+NG+RIKSYED+ + ASK YE I MD+V+ P
Sbjct: 196 VGSLGRYKDEKDVTDINVKDCTLKKTSNGVRIKSYEDAACVITASKLHYENIAMDDVANP 375
Query: 538 IIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVD 359
IIID KYCPN IC G SKV V DV FKNI GTS+TPEA++L C++ +PC GV + N+
Sbjct: 376 IIIDMKYCPNKICTAKGDSKVTVKDVTFKNITGTSSTPEAVSLLCSDKIPCSGVTMDNIK 555
Query: 358 IKYNGSGN 335
++Y G+ N
Sbjct: 556 VEYKGTNN 579
Score = 180 bits (387), Expect = 6e-044
Identities = 93/185 (50%), Positives = 105/185 (56%)
Frame = +3 / -3
Query: 345 PLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYF 524
PLY L+ TP G L Q + ASGV EVP MFL TSLT TLE+P Q+LLGQYF
Sbjct: 569 PLYSTLMLSMVTPLQGILSEQSRLTASGVDEVPVMFLNVTSLTVTLESPLAVQILLGQYF 390
Query: 525 WSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRRPFVVPAIVHPVTCXXXXXXXXXXX 704
SMMMG T SM M S +L A+ SS DL+R P +V V +T
Sbjct: 389 MSMMMGLATSSMAMFS*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYL 210
Query: 705 XXXXXXMPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPG 884
MPWPGP +TP I +LPGPMEMQSS ESPMWMPSVLGLSPG
Sbjct: 209 PRLPTLMPWPGPQVTPVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMPSVLGLSPG 30
Query: 885 ALTVT 899
A+TVT
Sbjct: 29 AVTVT 15
>gb|CW160105.1|CW160105 104_566_11149707_116_36428_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149707, DNA
sequence
Length = 725
Score = 313 bits (678), Expect = 4e-084
Identities = 123/192 (64%), Positives = 148/192 (77%)
Frame = -3 / +2
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIR 1187
DI++LGA GDGK DST + +AW +AC TG Q I+IP G+YL G L GPCK + I+
Sbjct: 149 DISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQ 328
Query: 1186 LDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNS 1007
+DGNLL T DLS Y+ NWIEI V+NL I G G +DGQG VWSKN C Y+CKILPNS
Sbjct: 329 VDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNS 508
Query: 1006 LVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVT 827
LVLD+V N ++ GITLLN+KFFH+N+F+CK++LI VTV APGDSPNTDGIH+GDSS VT
Sbjct: 509 LVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVT 688
Query: 826 ISSTTIGVGDDC 791
I +T IGVGDDC
Sbjct: 689 IENTVIGVGDDC 724
Score = 124 bits (265), Expect(2) = 2e-037
Identities = 62/119 (52%), Positives = 67/119 (56%)
Frame = +3 / -3
Query: 792 QSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTLSISTFLHSKMLRWKNLLLSSVMP 971
QSS ESPMWMPSVLGLSPGA+TVT I+ LH WKNL SSV+P
Sbjct: 723 QSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIP 544
Query: 972 RIWTFVTKSSTKLFGRILQL*ECWHWFLLHTRAPCPSMVPWPLMDRFSTFSISIQFLWY 1148
T SST GRILQ H FLLHT PCPS P P++ R ST ISIQ Y
Sbjct: 543 DTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLPLY 367
Score = 54.2 bits (112), Expect(2) = 2e-037
Identities = 28/53 (52%), Positives = 29/53 (54%)
Frame = +3 / -3
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLSDLPSPLAPSCAM 1364
L GP S P R* P GM I C PV HA HA VLS LPSP AP+ M
Sbjct: 309 LHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLM 151
>gb|CF488397.1|CF488397 POL1_49_E07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_49_E07_A002 5', mRNA sequence
Length = 699
Score = 312 bits (675), Expect = 1e-083
Identities = 124/195 (63%), Positives = 149/195 (76%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIR 1187
DI++LGA GDGK DST + +AW +AC TG Q I+ P G+YL L GPCK + I+
Sbjct: 115 DISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILTPKGDYLV*PLNFTGPCKGDVTIQ 294
Query: 1186 LDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNS 1007
+DGNLL T DLS Y+ NWIEI V+NL I G G +DGQG VWSKN C Y+CKILPNS
Sbjct: 295 VDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNS 474
Query: 1006 LVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVT 827
LVLD+V N ++ GITLLN+KFFH+N+F+CK++LI VTV APGDSPNTDGIH+GDSS VT
Sbjct: 475 LVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVT 654
Query: 826 ISSTTIGVGDDCISI 782
I +T IGVGDDCISI
Sbjct: 655 IENTVIGVGDDCISI 699
Score = 131 bits (280), Expect(2) = 8e-038
Identities = 65/122 (53%), Positives = 70/122 (57%)
Frame = +3 / -2
Query: 783 MEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTLSISTFLHSKMLRWKNLLLSS 962
MEMQSS ESPMWMPSVLGLSPGA+TVT I+ LH WKNL SS
Sbjct: 698 MEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSS 519
Query: 963 VMPRIWTFVTKSSTKLFGRILQL*ECWHWFLLHTRAPCPSMVPWPLMDRFSTFSISIQFL 1142
V+P T SST GRILQ H FLLHT PCPS P P++ R ST ISIQ
Sbjct: 518 VIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 339
Query: 1143 WY 1148
Y
Sbjct: 338 LY 333
Score = 48.7 bits (100), Expect(2) = 8e-038
Identities = 26/53 (49%), Positives = 28/53 (52%)
Frame = +3 / -2
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLSDLPSPLAPSCAM 1364
L GP S R* P G+ I C PV HA HA VLS LPSP AP+ M
Sbjct: 275 LHGPVKLSGQTR*SPLGVRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLM 117
>gb|CF480256.1|CF480256 POL1_64_D11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_D11_A002 5', mRNA sequence
Length = 691
Score = 173 bits (372), Expect(2) = 6e-083
Identities = 66/92 (71%), Positives = 79/92 (85%)
Frame = -3 / +2
Query: 985 NVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIG 806
N ++ GITLLN+KFFH+N+F+CK++LI VTV APGDSPNTDGIH+GDSS VTI +T IG
Sbjct: 413 NGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIG 592
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGISVGS 710
VGDDCISIGPG+ + I GV CGPGHGIS+GS
Sbjct: 593 VGDDCISIGPGTTKVNITGVTCGPGHGISIGS 688
Score = 157 bits (337), Expect(2) = 6e-083
Identities = 62/103 (60%), Positives = 74/103 (71%)
Frame = -3 / +3
Query: 1297 KNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLSAYQRNWIEIEN 1118
++AC TG Q I+IP G+YL G L GPCK + I++DGNLL T DLS Y+ NWIEI
Sbjct: 102 RSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQVDGNLLATTDLSQYKGNWIEILR 281
Query: 1117 VENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFV 989
V+NL I G G +DGQG VWSKN C Y+CKILPNSLVLD+V
Sbjct: 282 VDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYV 410
Score = 119 bits (254), Expect(3) = 4e-042
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = +3 / -2
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTL 902
MPWPGPH+TP M +++PGPMEMQSS ESPMWMPSVLGLSPGA+TVT
Sbjct: 675 MPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTS 496
Query: 903 SISTFLHSKMLRWKNLLLSSVMP 971
I+ LH WKNL SSV+P
Sbjct: 495 LINMSLHWNTFMWKNLAFSSVIP 427
Score = 57.9 bits (120), Expect(3) = 4e-042
Identities = 29/53 (54%), Positives = 31/53 (58%)
Frame = +3 / -1
Query: 990 TKSSTKLFGRILQL*ECWHWFLLHTRAPCPSMVPWPLMDRFSTFSISIQFLWY 1148
T SST GRILQ H FLLHT PCPS P P++ R ST ISIQ Y
Sbjct: 409 T*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLPLY 251
Score = 35.4 bits (71), Expect(3) = 4e-042
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = +3 / -1
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHA 1292
L GP S P R* P GM I C PV HA
Sbjct: 193 LHGPVKLSGPTR*SPLGMRIVCFPVPPHA 107
>gb|CF489809.1|CF489809 POL1_59_F04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_59_F04_A002 5', mRNA sequence
Length = 716
Score = 301 bits (651), Expect = 2e-080
Identities = 119/188 (63%), Positives = 144/188 (76%)
Frame = -3 / +3
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIR 1187
DI++LGA GDGK DST + +AW +AC TG Q I+IP G+YL G L GPCK + I+
Sbjct: 153 DISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQ 332
Query: 1186 LDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNS 1007
+DGNLL T DLS Y+ NWIEI V+NL I G G +DGQG VWSKN C Y+CKILPNS
Sbjct: 333 VDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNS 512
Query: 1006 LVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVT 827
LVLD+V N ++ GITLLN+KFFH+N+F+CK++LI VTV APGDSPNTDGIH+GDSS VT
Sbjct: 513 LVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVT 692
Query: 826 ISSTTIGV 803
I +T IGV
Sbjct: 693 IENTVIGV 716
Score = 123 bits (264), Expect(2) = 3e-037
Identities = 59/103 (57%), Positives = 64/103 (62%)
Frame = +3 / -2
Query: 840 ESPMWMPSVLGLSPGALTVTLSISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGR 1019
ESPMWMPSVLGLSPGA+TVT I+ LH WKNL SSV+P T SST GR
Sbjct: 679 ESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGR 500
Query: 1020 ILQL*ECWHWFLLHTRAPCPSMVPWPLMDRFSTFSISIQFLWY 1148
ILQ H FLLHT PCPS P P++ R ST ISIQ Y
Sbjct: 499 ILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLPLY 371
Score = 54.2 bits (112), Expect(2) = 3e-037
Identities = 28/53 (52%), Positives = 29/53 (54%)
Frame = +3 / -2
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLSDLPSPLAPSCAM 1364
L GP S P R* P GM I C PV HA HA VLS LPSP AP+ M
Sbjct: 313 LHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLM 155
>gb|CF486455.1|CF486455 POL1_37_F12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_37_F12_A002 5', mRNA sequence
Length = 719
Score = 299 bits (647), Expect = 8e-080
Identities = 118/187 (63%), Positives = 143/187 (76%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIR 1187
DI++LGA GDGK DST + +AW +AC TG Q I+IP G+YL G L GPCK + I+
Sbjct: 157 DISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQ 336
Query: 1186 LDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNS 1007
+DGNLL T DLS Y+ NWIEI V+NL I G G +DGQG VWSKN C Y+CKILPNS
Sbjct: 337 VDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNS 516
Query: 1006 LVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVT 827
LVLD+V N ++ GITLLN+KFFH+N+F+CK++LI VTV APGDSPNTDGIH+GDSS VT
Sbjct: 517 LVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVT 696
Query: 826 ISSTTIG 806
I +T IG
Sbjct: 697 IENTVIG 717
Score = 123 bits (264), Expect(2) = 3e-037
Identities = 59/103 (57%), Positives = 64/103 (62%)
Frame = +3 / -1
Query: 840 ESPMWMPSVLGLSPGALTVTLSISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGR 1019
ESPMWMPSVLGLSPGA+TVT I+ LH WKNL SSV+P T SST GR
Sbjct: 683 ESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGR 504
Query: 1020 ILQL*ECWHWFLLHTRAPCPSMVPWPLMDRFSTFSISIQFLWY 1148
ILQ H FLLHT PCPS P P++ R ST ISIQ Y
Sbjct: 503 ILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLPLY 375
Score = 54.2 bits (112), Expect(2) = 3e-037
Identities = 28/53 (52%), Positives = 29/53 (54%)
Frame = +3 / -1
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLSDLPSPLAPSCAM 1364
L GP S P R* P GM I C PV HA HA VLS LPSP AP+ M
Sbjct: 317 LHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLM 159
>gb|CF489443.1|CF489443 POL1_57_D04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_D04_A002 5', mRNA sequence
Length = 711
Score = 299 bits (647), Expect = 8e-080
Identities = 118/187 (63%), Positives = 143/187 (76%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIR 1187
DI++LGA GDGK DST + +AW +AC TG Q I+IP G+YL G L GPCK + I+
Sbjct: 151 DISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQ 330
Query: 1186 LDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNS 1007
+DGNLL T DLS Y+ NWIEI V+NL I G G +DGQG VWSKN C Y+CKILPNS
Sbjct: 331 VDGNLLATTDLSQYKGNWIEILRVDNLVITGKGRLDGQGPAVWSKNSCAKKYDCKILPNS 510
Query: 1006 LVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVT 827
LVLD+V N ++ GITLLN+KFFH+N+F+CK++LI VTV APGDSPNTDGIH+GDSS VT
Sbjct: 511 LVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVT 690
Query: 826 ISSTTIG 806
I +T IG
Sbjct: 691 IENTVIG 711
Score = 124 bits (266), Expect(2) = 1e-037
Identities = 59/103 (57%), Positives = 65/103 (63%)
Frame = +3 / -2
Query: 840 ESPMWMPSVLGLSPGALTVTLSISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGR 1019
ESPMWMPSVLGLSPGA+TVT I+ LH WKNL SSV+P T SST GR
Sbjct: 677 ESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGR 498
Query: 1020 ILQL*ECWHWFLLHTRAPCPSMVPWPLMDRFSTFSISIQFLWY 1148
ILQ H FLLHT PCPS +P P++ R ST ISIQ Y
Sbjct: 497 ILQSYFLAHEFLLHTAGPCPSSLPLPVITRLSTRRISIQLPLY 369
Score = 54.2 bits (112), Expect(2) = 1e-037
Identities = 28/53 (52%), Positives = 29/53 (54%)
Frame = +3 / -2
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLSDLPSPLAPSCAM 1364
L GP S P R* P GM I C PV HA HA VLS LPSP AP+ M
Sbjct: 311 LHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLM 153
>gb|CF480747.1|CF480747 POL1_67_D09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_D09_A002 5', mRNA sequence
Length = 748
Score = 223 bits (481), Expect(2) = 2e-078
Identities = 86/143 (60%), Positives = 107/143 (74%)
Frame = -3 / +3
Query: 1336 GKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGD 1157
GK DST + +AW +AC TG Q I+IP G+YL G L GPCK + I++DGNLL T D
Sbjct: 183 GKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQVDGNLLATTD 362
Query: 1156 LSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQ 977
LS Y+ NWIEI V+NL I G G +DGQG VWSKN C Y+CKILPNSLVLD+VTN +
Sbjct: 363 LSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVTNGE 542
Query: 976 IRGITLLNSKFFHLNIFECKNVL 908
+ GITLLN+KFFH+N+F+CK++L
Sbjct: 543 VSGITLLNAKFFHMNVFQCKDML 611
Score = 92.7 bits (196), Expect(2) = 2e-078
Identities = 37/48 (77%), Positives = 41/48 (85%)
Frame = -3 / +2
Query: 916 NVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPG 773
+V + VTV APGDSPNTDGIH+GDSS VTI +T IGVGDDCISIGPG
Sbjct: 605 HVXLRDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPG 748
Score = 80.3 bits (169), Expect(3) = 2e-035
Identities = 40/77 (51%), Positives = 43/77 (55%)
Frame = +3 / -1
Query: 918 LHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGRILQL*ECWHWFLLHTRAPCPSMVPWP 1097
LH WKNL SSV+P VT SST GRILQ H FLLHT PCPS P P
Sbjct: 601 LHWNTFMWKNLAFSSVIPDTSPLVT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLP 422
Query: 1098 LMDRFSTFSISIQFLWY 1148
++ R ST ISIQ Y
Sbjct: 421 VITRLSTRRISIQLPLY 371
Score = 66.1 bits (138), Expect(3) = 2e-035
Identities = 28/42 (66%), Positives = 29/42 (69%)
Frame = +3 / -2
Query: 774 PGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVT 899
PGPMEMQSS ESPMWMPSVLGLSPGA+TVT
Sbjct: 747 PGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVT 622
Score = 43.7 bits (89), Expect(3) = 2e-035
Identities = 23/44 (52%), Positives = 23/44 (52%)
Frame = +3 / -1
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLSDLP 1337
L GP S P R* P GM I C PV HA HA VLS LP
Sbjct: 313 LHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLP 182
>gb|CF483347.1|CF483347 POL1_21_D07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_21_D07_A002 5', mRNA sequence
Length = 709
Score = 292 bits (631), Expect = 1e-077
Identities = 115/181 (63%), Positives = 139/181 (76%)
Frame = -3 / +3
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIR 1187
DI++LGA GDGK DST + +AW +AC TG Q I+IP G+YL G L GPCK + I+
Sbjct: 165 DISKLGASGDGKKDSTKAVQEAWTSACGGTGEQTILIPKGDYLVGPLNFTGPCKGDVTIQ 344
Query: 1186 LDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNS 1007
+DGNLL T DLS Y+ NWIEI V+NL I G G +DGQG VWSKN C Y+CKILPNS
Sbjct: 345 VDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNS 524
Query: 1006 LVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVT 827
LVLD+V N ++ GITLLN+KFFH+N+F+CK++LI VTV APGDSPNTDGIH+GDSS VT
Sbjct: 525 LVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVT 704
Query: 826 I 824
I
Sbjct: 705 I 707
Score = 123 bits (264), Expect(2) = 1e-037
Identities = 59/103 (57%), Positives = 64/103 (62%)
Frame = +3 / -1
Query: 840 ESPMWMPSVLGLSPGALTVTLSISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGR 1019
ESPMWMPSVLGLSPGA+TVT I+ LH WKNL SSV+P T SST GR
Sbjct: 691 ESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGR 512
Query: 1020 ILQL*ECWHWFLLHTRAPCPSMVPWPLMDRFSTFSISIQFLWY 1148
ILQ H FLLHT PCPS P P++ R ST ISIQ Y
Sbjct: 511 ILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLPLY 383
Score = 55.6 bits (115), Expect(2) = 1e-037
Identities = 28/53 (52%), Positives = 30/53 (56%)
Frame = +3 / -1
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLSDLPSPLAPSCAM 1364
L GP S P R* P GM I C+PV HA HA VLS LPSP AP+ M
Sbjct: 325 LHGPVKLSGPTR*SPLGMRIVCSPVPPHADVHASCTAFVLSFLPSPEAPNLLM 167
>gb|CW258561.1|CW258561 104_724_11227944_148_35167_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227944, DNA
sequence
Length = 663
Score = 247 bits (533), Expect(2) = 5e-077
Identities = 97/170 (57%), Positives = 126/170 (74%)
Frame = -3 / +3
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
+LVL +VTN + GI LLNSKFFH+NI KN+ + V + APGD NTDG+H+G S+ V
Sbjct: 6 TLVLFYVTNGTVSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKV 185
Query: 829 TISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTI 650
+I+++TIG GDDCIS+GPGS + ++ + CGPG GIS+G LGRYKDEKDV DV V C +
Sbjct: 186 SITNSTIGTGDDCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVL 365
Query: 649 AGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
TTNG+RIKSYED++S L AS +E I M+ V+ PIIIDQ +CP +C
Sbjct: 366 KKTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVC 515
Score = 80.3 bits (169), Expect(3) = 7e-029
Identities = 38/97 (39%), Positives = 49/97 (50%)
Frame = +3 / -3
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTL 902
MP PGP + + LPGP EMQSS + P W PSV SPGA+ T
Sbjct: 292 MPCPGPQMMLFTMTPSLPGPTEMQSSPVPMVELVMLTLVDIPTWTPSVFSTSPGAVMFTS 113
Query: 903 SISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLF 1013
F + +L WKNL LSS++P VT +ST ++
Sbjct: 112 FTVMFFEASILMWKNLELSSLIPETVPLVT*NSTNVY 2
Score = 63.8 bits (133), Expect(2) = 5e-077
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -3 / +3
Query: 496 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVD 359
KS +S V V DV F+NI GTS+TP+AI+L C+ + PC GV L++V+
Sbjct: 525 KSDSSHVIVKDVTFRNITGTSSTPQAISLLCSQSQPCSGVSLIDVN 662
Score = 51.9 bits (107), Expect(3) = 7e-029
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +3 / -3
Query: 513 GQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRRPFVV 644
GQ +WSMMMG T S++M S A+S D SSYDLMR P VV
Sbjct: 502 GQKYWSMMMGFATSSILMFSKVRCDAVSTDSASSYDLMRTPLVV 371
Score = 35.4 bits (71), Expect(3) = 7e-029
Identities = 20/41 (48%), Positives = 22/41 (53%)
Frame = +3 / -3
Query: 363 TLTSCTPWHGRLLAQLSVMASGVLEVPWMFLKTTSLTATLE 485
T S TP HG Q +MA GV +VP M TSLT T E
Sbjct: 658 TSMSDTPLHGCDCEQSRLMACGVDDVPVMLRNVTSLTMT*E 536
>gb|CW333143.1|CW333143 104_831_11481784_148_36046_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481784, DNA
sequence
Length = 660
Score = 236 bits (509), Expect(2) = 5e-077
Identities = 91/159 (57%), Positives = 118/159 (74%)
Frame = -3 / +1
Query: 976 IRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGD 797
+ GI LLNSKFFH+NI KN+ + V + APGD NTDG+H+G S+ V+I+++TIG GD
Sbjct: 4 VSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKVSITNSTIGTGD 183
Query: 796 DCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKS 617
DCIS+GPGS + ++ + CGPG GIS+G LGRYKDEKDV DV V C + TTNG+RIKS
Sbjct: 184 DCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVLKKTTNGVRIKS 363
Query: 616 YEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
YED++S L AS +E I M+ V+ PIIIDQ +CP +C
Sbjct: 364 YEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVC 480
Score = 74.8 bits (157), Expect(2) = 5e-077
Identities = 29/57 (50%), Positives = 42/57 (73%)
Frame = -3 / +1
Query: 496 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTM 326
KS +S V V DV F+NI GTS+TP+AI+L C+ + PC GV L++V+++Y G +TM
Sbjct: 490 KSDSSHVIVKDVTFRNITGTSSTPQAISLLCSQSQPCSGVSLIDVNVEYAGKKQQTM 660
Score = 73.9 bits (155), Expect(3) = 4e-028
Identities = 34/83 (40%), Positives = 42/83 (50%)
Frame = +3 / -2
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTL 902
MP PGP + + LPGP EMQSS + P W PSV SPGA+ T
Sbjct: 257 MPCPGPQMMLFTMTPSLPGPTEMQSSPVPMVELVMLTLVDIPTWTPSVFSTSPGAVMFTS 78
Query: 903 SISTFLHSKMLRWKNLLLSSVMP 971
F + +L WKNL LSS++P
Sbjct: 77 FTVMFFEASILMWKNLELSSLIP 9
Score = 51.9 bits (107), Expect(3) = 4e-028
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +3 / -2
Query: 513 GQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRRPFVV 644
GQ +WSMMMG T S++M S A+S D SSYDLMR P VV
Sbjct: 467 GQKYWSMMMGFATSSILMFSKVRCDAVSTDSASSYDLMRTPLVV 336
Score = 39.1 bits (79), Expect(3) = 4e-028
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = +3 / -2
Query: 345 PLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVPWMFLKTTSLTATLE 485
P Y T S TP HG Q +MA GV +VP M TSLT T E
Sbjct: 641 PAYSTFTSMSDTPLHGCDCEQSRLMACGVDDVPVMLRNVTSLTMT*E 501
>gb|CF481397.1|CF481397 POL1_71_F02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_71_F02_A002 5', mRNA sequence
Length = 693
Score = 287 bits (621), Expect = 3e-076
Identities = 113/181 (62%), Positives = 139/181 (76%)
Frame = -3 / +3
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIR 1187
DI++LGA GDGK DST + +AW +AC TG Q I+IP G+YL G L GPCK + I+
Sbjct: 150 DISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQ 329
Query: 1186 LDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNS 1007
+DGNLL T DLS Y+ NWIEI V+NL I G G +DGQG VWSKN C Y+CKILPNS
Sbjct: 330 VDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNS 509
Query: 1006 LVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVT 827
LVLD+V + ++ GITLLN+KFFH+N+F+CK++LI VTV APGDSP+TDGIH+GDSS VT
Sbjct: 510 LVLDYVNDGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPHTDGIHMGDSSGVT 689
Query: 826 I 824
I
Sbjct: 690 I 692
Score = 120 bits (256), Expect(2) = 3e-036
Identities = 58/103 (56%), Positives = 63/103 (61%)
Frame = +3 / -3
Query: 840 ESPMWMPSVLGLSPGALTVTLSISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGR 1019
ESPMWMPSV GLSPGA+TVT I+ LH WKNL SSV+P T SST GR
Sbjct: 676 ESPMWMPSVWGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPSFT*SSTSELGR 497
Query: 1020 ILQL*ECWHWFLLHTRAPCPSMVPWPLMDRFSTFSISIQFLWY 1148
ILQ H FLLHT PCPS P P++ R ST ISIQ Y
Sbjct: 496 ILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLPLY 368
Score = 54.2 bits (112), Expect(2) = 3e-036
Identities = 28/53 (52%), Positives = 29/53 (54%)
Frame = +3 / -3
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLSDLPSPLAPSCAM 1364
L GP S P R* P GM I C PV HA HA VLS LPSP AP+ M
Sbjct: 310 LHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLM 152
>gb|CF480173.1|CF480173 POL1_64_D11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_D11_A002 3', mRNA sequence
Length = 637
Score = 286 bits (619), Expect = 6e-076
Identities = 115/182 (63%), Positives = 139/182 (76%)
Frame = -3 / +2
Query: 802 GDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRI 623
GDDCISIGPG+ + I GV CGPGHGIS+GSLGRYKDEKDV D+ V CT+ T+NGLRI
Sbjct: 2 GDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRI 181
Query: 622 KSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIH 443
K+YED+ S L ASK YE I M++ S PIIID KYCPN IC SGASKV V DV FKN+
Sbjct: 182 KAYEDAASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVT 361
Query: 442 GTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELACI* 263
GTS +PEA++L C++ +PC GV + NV ++Y+G NKTMAVC+NA G + G KELAC *
Sbjct: 362 GTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF* 541
Query: 262 TN 257
T+
Sbjct: 542 TS 547
Score = 128 bits (274), Expect(2) = 6e-039
Identities = 67/124 (54%), Positives = 82/124 (66%)
Frame = +3 / -2
Query: 273 ASSFAKPMDLPMAFLQTAMVLLPDPLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVPWMF 452
ASS +P+ LP+AF TAMVLL PLY TL+ TP G L Q + ASG+ EVP F
Sbjct: 531 ASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPVTF 352
Query: 453 LKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRR 632
LK TSLT TLEAP Q+LLGQYF SM+MG + S++M S L A+S + SSY L+RR
Sbjct: 351 LKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRR 172
Query: 633 PFVV 644
P +V
Sbjct: 171 PLLV 160
Score = 55.1 bits (114), Expect(2) = 6e-039
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +3 / -2
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSS 800
MPWPGPH+TP M +++PGPMEMQSS
Sbjct: 81 MPWPGPHVTPVMFTLVVPGPMEMQSS 4
>gb|BG355410.1|BG355410 EM1_16_B04.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 522
Score = 286 bits (618), Expect = 8e-076
Identities = 117/169 (69%), Positives = 133/169 (78%)
Frame = -3 / +1
Query: 898 VTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGIS 719
VTV APGDSPNTDGIHIGDSS VTI+ TTIGVGDDCISIGPGS I + GV CGPGHGIS
Sbjct: 16 VTVTAPGDSPNTDGIHIGDSSKVTITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGIS 195
Query: 718 VGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYP 539
VGSLGRYKDEKDV D+ V CT+ T+NG+RIKSYED+ + ASK YE I MD+V+ P
Sbjct: 196 VGSLGRYKDEKDVTDINVKDCTLKKTSNGVRIKSYEDAACVITASKLHYENIAMDDVANP 375
Query: 538 IIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNL 392
IIID KYCPN IC G SKV V DV FKNI GTS+TP A++L C++ +
Sbjct: 376 IIIDMKYCPNKICTAKGDSKVTVKDVTFKNITGTSSTPGAVSLLCSDKI 522
Score = 165 bits (354), Expect = 2e-039
Identities = 85/168 (50%), Positives = 96/168 (57%)
Frame = +3 / -2
Query: 396 LLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSMVMPSY 575
L Q + A GV EVP MFL TSLT TLE+P Q+LLGQYF SMMMG T SM M S
Sbjct: 518 LSEQSRLTAPGVDEVPVMFLNVTSLTVTLESPLAVQILLGQYFMSMMMGLATSSMAMFS* 339
Query: 576 RNLLALSDDLESSYDLMRRPFVVPAIVHPVTCXXXXXXXXXXXXXXXXXMPWPGPHLTPW 755
+L A+ SS DL+R P +V V +T MPWPGP +TP
Sbjct: 338 WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQVTPV 159
Query: 756 MRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVT 899
I +LPGPMEMQSS ESPMWMPSVLGLSPGA+TVT
Sbjct: 158 TLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMPSVLGLSPGAVTVT 15
>gb|CL149387.1|CL149387 104_330_10777794_114_31353_114 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10777794, DNA
sequence
Length = 711
Score = 201 bits (434), Expect(2) = 3e-075
Identities = 77/133 (57%), Positives = 100/133 (75%)
Frame = -3 / -2
Query: 898 VTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGIS 719
V + APGD NTDG+H+G S+ V+I+++TIG GDDCIS+GPGS + ++ + CGPG GIS
Sbjct: 707 VNITAPGDVENTDGVHVGMSTKVSITNSTIGTGDDCISVGPGSDGVMVNNIICGPGQGIS 528
Query: 718 VGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYP 539
+G LGRYKDEKDV DV V C + TTNG+RIKSYED++S L AS +E I M+ V+ P
Sbjct: 527 IGCLGRYKDEKDVTDVTVRDCVLKKTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANP 348
Query: 538 IIIDQKYCPNNIC 500
IIIDQ +CP +C
Sbjct: 347 IIIDQYFCPEKVC 309
Score = 103 bits (219), Expect(2) = 3e-075
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = -3 / -2
Query: 496 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVC 317
KS +S V V DV F+NI GTS+TP+AI+L C+ + PC GV L++V+++Y G NKTMAVC
Sbjct: 299 KSDSSHVIVKDVTFRNITGTSSTPQAISLLCSQSQPCSGVSLIDVNVEYAGKNNKTMAVC 120
Query: 316 KNAIGKSIGLAKELACI 266
NA G + G + LAC+
Sbjct: 119 SNAKGTAKGSVEALACL 69
Score = 58.8 bits (122), Expect(3) = 2e-027
Identities = 32/65 (49%), Positives = 37/65 (56%)
Frame = +3 / +1
Query: 291 PMDLPMAFLQTAMVLLPDPLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVPWMFLKTTSL 470
P+ +P+A L TAMVLL P Y T S TP HG Q +MA GV +VP M TSL
Sbjct: 94 PLAVPLALLHTAMVLLFLPAYSTFTSMSDTPLHGCDCEQSRLMACGVDDVPVMLRNVTSL 273
Query: 471 TATLE 485
T T E
Sbjct: 274 TMT*E 288
Score = 52.4 bits (108), Expect(3) = 2e-027
Identities = 24/59 (40%), Positives = 28/59 (47%)
Frame = +3 / +1
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVT 899
MP PGP + + LPGP EMQSS + P W PSV SPGA+ T
Sbjct: 532 MPCPGPQMMLFTMTPSLPGPTEMQSSPVPMVELVMLTLVDIPTWTPSVFSTSPGAVMFT 708
Score = 51.9 bits (107), Expect(3) = 2e-027
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +3 / +1
Query: 513 GQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRRPFVV 644
GQ +WSMMMG T S++M S A+S D SSYDLMR P VV
Sbjct: 322 GQKYWSMMMGFATSSILMFSKVRCDAVSTDSASSYDLMRTPLVV 453
>gb|CF488060.1|CF488060 POL1_47_C02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_47_C02_A002 5', mRNA sequence
Length = 682
Score = 282 bits (611), Expect = 8e-075
Identities = 110/176 (62%), Positives = 135/176 (76%)
Frame = -3 / +3
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIR 1187
DI++LGA GDGK DST + +AW +AC TG Q I+IP G+YL G L GPCK + I+
Sbjct: 153 DISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQ 332
Query: 1186 LDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNS 1007
+DGNLL T DLS Y+ NWIEI V+NL I G G +DGQG VWSKN C Y+CKILPNS
Sbjct: 333 VDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNS 512
Query: 1006 LVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDS 839
LVLD+V N ++ GITL+N+KFFH+N+F+CK++LI VTV APGDSPNTDGIH+GDS
Sbjct: 513 LVLDYVNNGEVSGITLVNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDS 680
Score = 122 bits (261), Expect(2) = 7e-037
Identities = 58/103 (56%), Positives = 64/103 (62%)
Frame = +3 / -1
Query: 840 ESPMWMPSVLGLSPGALTVTLSISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGR 1019
ESPMWMPSVLGLSPGA+TVT I+ LH WKNL +SV+P T SST GR
Sbjct: 679 ESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFTSVIPDTSPLFT*SSTSELGR 500
Query: 1020 ILQL*ECWHWFLLHTRAPCPSMVPWPLMDRFSTFSISIQFLWY 1148
ILQ H FLLHT PCPS P P++ R ST ISIQ Y
Sbjct: 499 ILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLPLY 371
Score = 54.2 bits (112), Expect(2) = 7e-037
Identities = 28/53 (52%), Positives = 29/53 (54%)
Frame = +3 / -1
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLSDLPSPLAPSCAM 1364
L GP S P R* P GM I C PV HA HA VLS LPSP AP+ M
Sbjct: 313 LHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLM 155
>gb|CW160106.1|CW160106 104_566_11149707_148_36427_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149707, DNA
sequence
Length = 526
Score = 266 bits (576), Expect(2) = 3e-074
Identities = 106/148 (71%), Positives = 125/148 (84%)
Frame = -3 / -3
Query: 1024 KILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIG 845
KILPNSLVLD+V N ++ GITLLN+KFFH+N+F+CK++LI VTV APGDSPNTDGIH+G
Sbjct: 524 KILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMG 345
Query: 844 DSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQV 665
DSS VTI +T IGVGDDCISIGPG+ + I GV CGPGHGIS+GSLGRYKDEKDV D+ V
Sbjct: 344 DSSGVTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINV 165
Query: 664 TGCTIAGTTNGLRIKSYEDSKSSLKASK 581
CT+ T+NGLRIK+YED+ S L ASK
Sbjct: 164 KDCTLKKTSNGLRIKAYEDAASVLTASK 81
Score = 129 bits (276), Expect(3) = 7e-034
Identities = 57/101 (56%), Positives = 64/101 (63%)
Frame = +3 / +1
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTL 902
MPWPGPH+TP M +++PGPMEMQSS ESPMWMPSVLGLSPGA+TVT
Sbjct: 223 MPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTS 402
Query: 903 SISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGRIL 1025
I+ LH WKNL SSV+P T SST GRIL
Sbjct: 403 LINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRIL 525
Score = 35.0 bits (70), Expect(2) = 3e-074
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3 / -2
Query: 571 EGITMDNVSYPIIIDQKYCPNNI 503
E I ++ S PII+D+KYCPN I
Sbjct: 72 ENIKREDWSNPIIMDRKYCPNKI 4
Score = 29.9 bits (59), Expect(3) = 7e-034
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3 / +2
Query: 504 MLLGQYFWSMMMG*ETLSMVM 566
+LLGQYF SM+MG + S++M
Sbjct: 5 ILLGQYFLSMIMGFDQSSLLM 67
Score = 25.4 bits (49), Expect(3) = 7e-034
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3 / +1
Query: 582 LLALSDDLESSYDLMRRPFVV 644
L A+S + SSY L+RRP +V
Sbjct: 82 LEAVSTEAASSYALIRRPLLV 144
>gb|CF487334.1|CF487334 POL1_43_D12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_D12_A002 3', mRNA sequence
Length = 637
Score = 274 bits (592), Expect = 3e-072
Identities = 111/178 (62%), Positives = 135/178 (75%)
Frame = -3 / +1
Query: 790 ISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYE 611
ISIGPG+ + I GV CGPGHGIS+GSLGRYKDEKDV D+ V CT+ T+NGLRIK+YE
Sbjct: 1 ISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYE 180
Query: 610 DSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSN 431
D+ S L ASK YE I M++ S PIIID KYCPN IC SGASKV V DV FKN+ GTS
Sbjct: 181 DAASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSA 360
Query: 430 TPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELACI*TN 257
+PEA++L C++ +PC GV + NV ++Y+G NKTMAVC+NA G + G KELAC *T+
Sbjct: 361 SPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF*TS 534
Score = 128 bits (274), Expect(2) = 2e-036
Identities = 67/124 (54%), Positives = 82/124 (66%)
Frame = +3 / -3
Query: 273 ASSFAKPMDLPMAFLQTAMVLLPDPLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVPWMF 452
ASS +P+ LP+AF TAMVLL PLY TL+ TP G L Q + ASG+ EVP F
Sbjct: 518 ASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPVTF 339
Query: 453 LKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRR 632
LK TSLT TLEAP Q+LLGQYF SM+MG + S++M S L A+S + SSY L+RR
Sbjct: 338 LKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRR 159
Query: 633 PFVV 644
P +V
Sbjct: 158 PLLV 147
Score = 46.9 bits (96), Expect(2) = 2e-036
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +3 / -3
Query: 723 MPWPGPHLTPWMRIILLPGPME 788
MPWPGPH+TP M +++PGPME
Sbjct: 68 MPWPGPHVTPVMFTLVVPGPME 3
>gb|BH246023.1|BH246023 pSB1633.1 S. bicolor BTx623 PstI-digested total genomic DNA library
Sorghum bicolor genomic clone pSB1633 similar to PG gene
for polygalacturonase (X66422), DNA sequence
Length = 479
Score = 270 bits (584), Expect = 4e-071
Identities = 109/159 (68%), Positives = 125/159 (78%)
Frame = -3 / -1
Query: 862 DGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKD 683
DGIHIGDSS VTI+ TTIGVGDDCISIGPGS I + GV CGPGHGISVGSLGRYKDEKD
Sbjct: 479 DGIHIGDSSKVTITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKD 300
Query: 682 VEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNI 503
V D+ V CT+ T+NG+RIKSYED+ + ASK YE I MD+V+ PIIID KYCPN I
Sbjct: 299 VTDINVKDCTLKKTSNGVRIKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKI 120
Query: 502 CVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPC 386
C G SKV V DV FKNI GTS+TPEA++L C++ +PC
Sbjct: 119 CTAKGDSKVTVKDVTFKNITGTSSTPEAVSLLCSDKIPC 3
Score = 142 bits (304), Expect = 2e-032
Identities = 75/157 (47%), Positives = 85/157 (54%)
Frame = +3 / +1
Query: 390 GRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSMVMP 569
G L Q + ASGV EVP MFL TSLT TLE+P Q+LLGQYF SMMMG T SM M
Sbjct: 7 GILSEQSRLTASGVDEVPVMFLNVTSLTVTLESPLAVQILLGQYFMSMMMGLATSSMAMF 186
Query: 570 SYRNLLALSDDLESSYDLMRRPFVVPAIVHPVTCXXXXXXXXXXXXXXXXXMPWPGPHLT 749
S +L A+ SS DL+R P +V V +T MPWPGP +T
Sbjct: 187 S*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQVT 366
Query: 750 PWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMP 860
P I +LPGPMEMQSS ESPMWMP
Sbjct: 367 PVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMP 477
>gb|CF489185.1|CF489185 POL1_55_F02.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_55_F02_A002 3', mRNA sequence
Length = 619
Score = 270 bits (584), Expect = 4e-071
Identities = 109/176 (61%), Positives = 133/176 (75%)
Frame = -3 / +3
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
IGPG+ + I GV CGPGHGIS+GSLGRYKDEKDV D+ V CT+ T+NGLRIK+YED+
Sbjct: 3 IGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDA 182
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTP 425
S L ASK YE I M++ S PIIID KYCPN IC SGASKV V DV FKN+ GTS +P
Sbjct: 183 ASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSASP 362
Query: 424 EAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELACI*TN 257
EA++L C++ +PC GV + NV ++Y+G NKTMAVC+NA G + G KELAC *T+
Sbjct: 363 EAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF*TS 530
Score = 128 bits (274), Expect(2) = 9e-036
Identities = 67/124 (54%), Positives = 82/124 (66%)
Frame = +3 / -1
Query: 273 ASSFAKPMDLPMAFLQTAMVLLPDPLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVPWMF 452
ASS +P+ LP+AF TAMVLL PLY TL+ TP G L Q + ASG+ EVP F
Sbjct: 514 ASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPVTF 335
Query: 453 LKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRR 632
LK TSLT TLEAP Q+LLGQYF SM+MG + S++M S L A+S + SSY L+RR
Sbjct: 334 LKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRR 155
Query: 633 PFVV 644
P +V
Sbjct: 154 PLLV 143
Score = 44.6 bits (91), Expect(2) = 9e-036
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3 / -1
Query: 723 MPWPGPHLTPWMRIILLPGPM 785
MPWPGPH+TP M +++PGPM
Sbjct: 64 MPWPGPHVTPVMFTLVVPGPM 2
>gb|CF488665.1|CF488665 POL1_51_A10.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_51_A10_A002 5', mRNA sequence
Length = 651
Score = 224 bits (484), Expect(2) = 8e-071
Identities = 88/134 (65%), Positives = 104/134 (77%)
Frame = -3 / +2
Query: 1228 LELKGPCKSSIIIRLDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKN 1049
L GPCK + I++DGNLL T DLS Y+ NWIEI V+NL I G G +DGQG VWSKN
Sbjct: 248 LNFTGPCKGDVTIQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKN 427
Query: 1048 QCQHSYNCKILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSP 869
C Y+CKILPNSLVLD+V N ++ GITLLN+KFFH+N+F CK++LI VTV APGDSP
Sbjct: 428 SCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFXCKDMLIKDVTVTAPGDSP 607
Query: 868 NTDGIHIGDSSNVT 827
NTDGIH+GDSS VT
Sbjct: 608 NTDGIHMGDSSGVT 649
Score = 119 bits (255), Expect(2) = 6e-033
Identities = 58/103 (56%), Positives = 63/103 (61%)
Frame = +3 / -1
Query: 840 ESPMWMPSVLGLSPGALTVTLSISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGR 1019
ESPMWMPSVLGLSPGA+TVT I+ L WKNL SSV+P T SST GR
Sbjct: 636 ESPMWMPSVLGLSPGAVTVTSLINMSLXWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGR 457
Query: 1020 ILQL*ECWHWFLLHTRAPCPSMVPWPLMDRFSTFSISIQFLWY 1148
ILQ H FLLHT PCPS P P++ R ST ISIQ Y
Sbjct: 456 ILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLPLY 328
Score = 65.7 bits (137), Expect(2) = 8e-071
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGP 1211
DI++LGA GDGK DST + +AW +AC TG Q I+IP G+YL +L P
Sbjct: 109 DISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVCISQLHRP 264
Score = 43.7 bits (89), Expect(2) = 6e-033
Identities = 23/42 (54%), Positives = 24/42 (57%)
Frame = +3 / -2
Query: 1239 R*LPGGMTIFCTPVASHAFFHALRIIGVLSDLPSPLAPSCAM 1364
R* P GM I C PV HA HA VLS LPSP AP+ M
Sbjct: 236 R*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLM 111
>gb|CF486033.1|CF486033 POL1_35_F09.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_F09_A002 3', mRNA sequence
Length = 618
Score = 265 bits (574), Expect = 1e-069
Identities = 107/174 (61%), Positives = 131/174 (75%)
Frame = -3 / +1
Query: 778 PGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKS 599
PG+ + I GV CGPGHGIS+GSLGRYKDEKDV D+ V CT+ T+NGLRIK+YED+ S
Sbjct: 1 PGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAAS 180
Query: 598 SLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEA 419
L ASK YE I M++ S PIIID KYCPN IC SGASKV V DV FKN+ GTS +PEA
Sbjct: 181 VLTASKIHYENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSASPEA 360
Query: 418 ITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELACI*TN 257
++L C++ +PC GV + NV ++Y+G NKTMAVC+NA G + G KELAC *T+
Sbjct: 361 VSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF*TS 522
Score = 128 bits (274), Expect(2) = 2e-033
Identities = 67/124 (54%), Positives = 82/124 (66%)
Frame = +3 / -2
Query: 273 ASSFAKPMDLPMAFLQTAMVLLPDPLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVPWMF 452
ASS +P+ LP+AF TAMVLL PLY TL+ TP G L Q + ASG+ EVP F
Sbjct: 506 ASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPVTF 327
Query: 453 LKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRR 632
LK TSLT TLEAP Q+LLGQYF SM+MG + S++M S L A+S + SSY L+RR
Sbjct: 326 LKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRR 147
Query: 633 PFVV 644
P +V
Sbjct: 146 PLLV 135
Score = 36.3 bits (73), Expect(2) = 2e-033
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3 / -2
Query: 723 MPWPGPHLTPWMRIILLP 776
MPWPGPH+TP M +++P
Sbjct: 56 MPWPGPHVTPVMFTLVVP 3
>gb|CF485801.1|CF485801 POL1_33_F06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F06_A002 5', mRNA sequence
Length = 663
Score = 255 bits (551), Expect(2) = 1e-069
Identities = 101/146 (69%), Positives = 118/146 (80%)
Frame = -3 / +3
Query: 937 LNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIR 758
+N+F+CK++LI VTV APGDSPNTDGIH+GDSS VTI +T IGVGDDCISIGPG+ +
Sbjct: 222 MNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVN 401
Query: 757 IHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKF 578
I GV CGPGHGIS+GSLGRYKDEKDV D+ V CT+ T+NGLRIK+YED+ S L ASK
Sbjct: 402 ITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKI 581
Query: 577 LYEGITMDNVSYPIIIDQKYCPNNIC 500
YE I M++ S PIIID KYCPN IC
Sbjct: 582 HYENIKMEDSSNPIIIDMKYCPNKIC 659
Score = 100 bits (214), Expect(3) = 2e-029
Identities = 41/67 (61%), Positives = 47/67 (70%)
Frame = +3 / -3
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTL 902
MPWPGPH+TP M +++PGPMEMQSS ESPMWMPSVLGLSPGA+TVT
Sbjct: 436 MPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTS 257
Query: 903 SISTFLH 923
I+ LH
Sbjct: 256 LINMSLH 236
Score = 50.1 bits (103), Expect(3) = 2e-029
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +3 / -3
Query: 501 QMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRRPFVV 644
Q+LLGQYF SM+MG + S++M S L A+S + SSY L+RRP +V
Sbjct: 658 QILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLV 515
Score = 34.1 bits (68), Expect(2) = 1e-069
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKA 1301
DI++LGA GDGK DST + +A
Sbjct: 157 DISKLGASGDGKKDSTKAVQEA 222
Score = 23.5 bits (45), Expect(3) = 2e-029
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3 / -2
Query: 1299 HALRIIGVLSDLPSPLAPSCAM 1364
HA VLS LPSP AP+ M
Sbjct: 224 HASCTAFVLSFLPSPEAPNLLM 159
>gb|CL155265.1|CL155265 104_341_10782005_114_31471_101 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782005, DNA
sequence
Length = 706
Score = 263 bits (568), Expect = 6e-069
Identities = 103/167 (61%), Positives = 126/167 (75%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIR 1187
DI++LGA GDGK DST + +AW +AC TG Q I+IP G+YL G L GPCK + I+
Sbjct: 205 DISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQ 384
Query: 1186 LDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNS 1007
+DGNLL T DLS Y+ NWIEI V+NL I G G +DGQG VWSKN C Y+CKILPNS
Sbjct: 385 VDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNS 564
Query: 1006 LVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPN 866
LVLD+V N ++ GITLLN+KFFH+N+F+CK++LI VTV APGDSPN
Sbjct: 565 LVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPN 705
Score = 100 bits (212), Expect(2) = 3e-030
Identities = 50/94 (53%), Positives = 55/94 (58%)
Frame = +3 / -3
Query: 867 LGLSPGALTVTLSISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGRILQL*ECWH 1046
LGLSPGA+TVT I+ LH WKNL SSV+P T SST GRILQ H
Sbjct: 704 LGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAH 525
Query: 1047 WFLLHTRAPCPSMVPWPLMDRFSTFSISIQFLWY 1148
FLLHT PCPS P P++ R ST ISIQ Y
Sbjct: 524 EFLLHTAGPCPSSFPLPVITRLSTRRISIQLPLY 423
Score = 54.2 bits (112), Expect(2) = 3e-030
Identities = 28/53 (52%), Positives = 29/53 (54%)
Frame = +3 / -3
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLSDLPSPLAPSCAM 1364
L GP S P R* P GM I C PV HA HA VLS LPSP AP+ M
Sbjct: 365 LHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLM 207
>gb|CL187601.1|CL187601 104_403_10901000_114_32460_026 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10901000, DNA
sequence
Length = 752
Score = 247 bits (533), Expect(2) = 8e-068
Identities = 97/170 (57%), Positives = 126/170 (74%)
Frame = -3 / +2
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
+LVL +VTN + GI LLNSKFFH+NI KN+ + V + APGD NTDG+H+G S+ V
Sbjct: 107 TLVLFYVTNGTVSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKV 286
Query: 829 TISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTI 650
+I+++TIG GDDCIS+GPGS + ++ + CGPG GIS+G LGRYKDEKDV DV V C +
Sbjct: 287 SITNSTIGTGDDCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVL 466
Query: 649 AGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
TTNG+RIKSYED++S L AS +E I M+ V+ PIIIDQ +CP +C
Sbjct: 467 KKTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVC 616
Score = 80.3 bits (169), Expect(2) = 1e-023
Identities = 38/97 (39%), Positives = 49/97 (50%)
Frame = +3 / -3
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTL 902
MP PGP + + LPGP EMQSS + P W PSV SPGA+ T
Sbjct: 393 MPCPGPQMMLFTMTPSLPGPTEMQSSPVPMVELVMLTLVDIPTWTPSVFSTSPGAVMFTS 214
Query: 903 SISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLF 1013
F + +L WKNL LSS++P VT +ST ++
Sbjct: 213 FTVMFFEASILMWKNLELSSLIPETVPLVT*NSTNVY 103
Score = 51.9 bits (107), Expect(2) = 1e-023
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +3 / -3
Query: 513 GQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRRPFVV 644
GQ +WSMMMG T S++M S A+S D SSYDLMR P VV
Sbjct: 603 GQKYWSMMMGFATSSILMFSKVRCDAVSTDSASSYDLMRTPLVV 472
Score = 33.1 bits (66), Expect(2) = 8e-068
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -3 / +2
Query: 496 KSGASKVAVNDVVFKNIHGTSNT 428
KS +S V V DV F+NI GTS+T
Sbjct: 626 KSDSSHVIVKDVTFRNITGTSST 694
>gb|BG412065.1|BG412065 OV2_37_E12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 459
Score = 259 bits (560), Expect = 8e-068
Identities = 106/151 (70%), Positives = 119/151 (78%)
Frame = -3 / +1
Query: 886 APGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSL 707
A GDSPNTDGIH+GDSS VTI +T IGVGDDCISIGPG+ + I GV CGPGHGIS+GSL
Sbjct: 1 ARGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISIGSL 180
Query: 706 GRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIID 527
GRYKDEKDV D+ V CT+ T+NGLRIK+YED+ S L ASK YE I M++ S PIIID
Sbjct: 181 GRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYENIKMEDSSNPIIID 360
Query: 526 QKYCPNNICVKSGASKVAVNDVVFKNIHGTS 434
KYCPN IC SGASKV V DV FKN+ GTS
Sbjct: 361 MKYCPNKICTASGASKVTVKDVSFKNVTGTS 453
Score = 84.9 bits (179), Expect(2) = 3e-033
Identities = 33/53 (62%), Positives = 37/53 (69%)
Frame = +3 / -2
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSP 881
MPWPGPH+TP M +++PGPMEMQSS ESPMWMPSVLGLSP
Sbjct: 164 MPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSP 6
Score = 79.4 bits (167), Expect(2) = 3e-033
Identities = 40/70 (57%), Positives = 49/70 (70%)
Frame = +3 / -2
Query: 435 EVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESS 614
EVP FLK TSLT TLEAP Q+LLGQYF SM+MG + S++M S L A+S + SS
Sbjct: 452 EVPVTFLKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASS 273
Query: 615 YDLMRRPFVV 644
Y L+RRP +V
Sbjct: 272 YALIRRPLLV 243
>gb|CW463315.1|CW463315 fsbb001f211n16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f211n16, DNA
sequence
Length = 695
Score = 259 bits (559), Expect = 1e-067
Identities = 101/166 (60%), Positives = 125/166 (75%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIR 1187
DI++LGA GDGK DST + +AW +AC TG Q I+IP G+YL G L GPCK + I+
Sbjct: 196 DISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQ 375
Query: 1186 LDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNS 1007
+DGNLL T DLS Y+ NWIEI V+NL I G G +DGQG VWSKN C Y+CKILPNS
Sbjct: 376 VDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNS 555
Query: 1006 LVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSP 869
LVLD+V N ++ GITL+N+KFFH+N+F+CK++LI VTV APGDSP
Sbjct: 556 LVLDYVNNGEVSGITLVNAKFFHMNVFQCKDMLIKDVTVTAPGDSP 693
Score = 98.7 bits (209), Expect(2) = 9e-030
Identities = 49/94 (52%), Positives = 55/94 (58%)
Frame = +3 / -1
Query: 867 LGLSPGALTVTLSISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGRILQL*ECWH 1046
LGLSPGA+TVT I+ LH WKNL +SV+P T SST GRILQ H
Sbjct: 695 LGLSPGAVTVTSLINMSLHWNTFMWKNLAFTSVIPDTSPLFT*SSTSELGRILQSYFLAH 516
Query: 1047 WFLLHTRAPCPSMVPWPLMDRFSTFSISIQFLWY 1148
FLLHT PCPS P P++ R ST ISIQ Y
Sbjct: 515 EFLLHTAGPCPSSFPLPVITRLSTRRISIQLPLY 414
Score = 54.2 bits (112), Expect(2) = 9e-030
Identities = 28/53 (52%), Positives = 29/53 (54%)
Frame = +3 / -1
Query: 1206 LQGPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLSDLPSPLAPSCAM 1364
L GP S P R* P GM I C PV HA HA VLS LPSP AP+ M
Sbjct: 356 LHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLM 198
>gb|BG411749.1|BG411749 OV2_37_E12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 670
Score = 258 bits (557), Expect = 2e-067
Identities = 104/165 (63%), Positives = 126/165 (76%)
Frame = -3 / +2
Query: 751 GVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLY 572
GV CGPGHGIS+GSLGRYKDEKDV D+ V CT+ T+NGLRIK+YED+ S L ASK Y
Sbjct: 5 GVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHY 184
Query: 571 EGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNL 392
E I M++ S PIIID KYCPN IC SGASKV V DV FKN+ GTS +PEA++L C++ +
Sbjct: 185 ENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKI 364
Query: 391 PCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELACI*TN 257
PC GV + NV ++Y+G NKTMAVC+NA G + G KELAC *T+
Sbjct: 365 PCTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF*TS 499
Score = 128 bits (274), Expect(2) = 4e-032
Identities = 67/124 (54%), Positives = 82/124 (66%)
Frame = +3 / -2
Query: 273 ASSFAKPMDLPMAFLQTAMVLLPDPLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVPWMF 452
ASS +P+ LP+AF TAMVLL PLY TL+ TP G L Q + ASG+ EVP F
Sbjct: 483 ASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPVTF 304
Query: 453 LKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRR 632
LK TSLT TLEAP Q+LLGQYF SM+MG + S++M S L A+S + SSY L+RR
Sbjct: 303 LKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRR 124
Query: 633 PFVV 644
P +V
Sbjct: 123 PLLV 112
Score = 32.2 bits (64), Expect(2) = 4e-032
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / -2
Query: 723 MPWPGPHLTP 752
MPWPGPH+TP
Sbjct: 33 MPWPGPHVTP 4
>gb|CF485728.1|CF485728 POL1_33_F06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F06_A002 3', mRNA sequence
Length = 609
Score = 255 bits (551), Expect = 1e-066
Identities = 103/164 (62%), Positives = 125/164 (76%)
Frame = -3 / +3
Query: 748 VKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYE 569
V CGPGHGIS+GSLGRYKDEKDV D+ V CT+ T+NGLRIK+YED+ S L ASK YE
Sbjct: 3 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYE 182
Query: 568 GITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLP 389
I M++ S PIIID KYCPN IC SGASKV V DV FKN+ GTS +PEA++L C++ +P
Sbjct: 183 NIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIP 362
Query: 388 CQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELACI*TN 257
C GV + NV ++Y+G NKTMAVC+NA G + G KELAC *T+
Sbjct: 363 CTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF*TS 494
Score = 128 bits (274), Expect(2) = 4e-031
Identities = 67/124 (54%), Positives = 82/124 (66%)
Frame = +3 / -3
Query: 273 ASSFAKPMDLPMAFLQTAMVLLPDPLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVPWMF 452
ASS +P+ LP+AF TAMVLL PLY TL+ TP G L Q + ASG+ EVP F
Sbjct: 478 ASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPVTF 299
Query: 453 LKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRR 632
LK TSLT TLEAP Q+LLGQYF SM+MG + S++M S L A+S + SSY L+RR
Sbjct: 298 LKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRR 119
Query: 633 PFVV 644
P +V
Sbjct: 118 PLLV 107
Score = 29.0 bits (57), Expect(2) = 4e-031
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3 / -3
Query: 723 MPWPGPHLT 749
MPWPGPH+T
Sbjct: 28 MPWPGPHVT 2
>gb|CF489342.1|CF489342 POL1_57_B05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_B05_A002 3', mRNA sequence
Length = 670
Score = 253 bits (548), Expect = 4e-066
Identities = 102/162 (62%), Positives = 124/162 (76%)
Frame = -3 / +3
Query: 742 CGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGI 563
CGPGHGIS+GSLGRYKDEKDV D+ V CT+ T+NGLRIK+YED+ S L ASK YE I
Sbjct: 6 CGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYENI 185
Query: 562 TMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQ 383
M++ S PIIID KYCPN IC SGASKV V DV FKN+ GTS +PEA++L C++ +PC
Sbjct: 186 KMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCT 365
Query: 382 GVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELACI*TN 257
GV + NV ++Y+G NKTMAVC+NA G + G KELAC *T+
Sbjct: 366 GVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF*TS 491
Score = 128 bits (274), Expect(2) = 2e-030
Identities = 67/124 (54%), Positives = 82/124 (66%)
Frame = +3 / -1
Query: 273 ASSFAKPMDLPMAFLQTAMVLLPDPLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVPWMF 452
ASS +P+ LP+AF TAMVLL PLY TL+ TP G L Q + ASG+ EVP F
Sbjct: 475 ASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPVTF 296
Query: 453 LKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRR 632
LK TSLT TLEAP Q+LLGQYF SM+MG + S++M S L A+S + SSY L+RR
Sbjct: 295 LKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRR 116
Query: 633 PFVV 644
P +V
Sbjct: 115 PLLV 104
Score = 26.7 bits (52), Expect(2) = 2e-030
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +3 / -1
Query: 723 MPWPGPHL 746
MPWPGPH+
Sbjct: 25 MPWPGPHV 2
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,293,817,404
Number of Sequences: 832831
Number of extensions: 16529916
Number of successful extensions: 140628
Number of sequences better than 1.0e-020: 177
length of database: 163,786,556
effective HSP length: 56
effective length of database: 117,148,020
effective search space used: 53770941180
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)