TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3106156.2.1
(1016 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ656122.1|BQ656122 pRC1119 Sorghum halepense rhizome cD... 398 e-139
gb|CN123895.1|CN123895 RHOH1_1_H10.b1_A002 Acid- and alkali... 414 e-137
gb|BE359967.1|BE359967 DG1_60_B02.g2_A002 Dark Grown 1 (DG1... 286 4e-076
gb|CD233593.1|CD233593 SS1_3_B09.b1_A012 Salt-stressed seed... 282 5e-075
gb|CL160782.1|CL160782 104_351_10805235_116_31825_291 Sorgh... 123 2e-070
gb|BG049722.1|BG049722 EM1_8_C12.g1_A002 Embryo 1 (EM1) Sor... 263 4e-069
gb|CL190298.1|CL190298 104_408_10905986_114_32484_009 Sorgh... 114 2e-066
gb|CL160781.1|CL160781 104_351_10805235_114_31824_291 Sorgh... 185 7e-063
gb|CW352663.1|CW352663 fsbb001f015a20f0 Sorghum methylation... 114 3e-058
gb|CN126287.1|CN126287 RHOH1_16_F09.b1_A002 Acid- and alkal... 223 4e-057
gb|CL172473.1|CL172473 104_375_10890187_116_31797_091 Sorgh... 136 6e-057
gb|BG739395.1|BG739395 EM1_82_D08.g1_A002 Embryo 1 (EM1) So... 219 5e-056
gb|CW338168.1|CW338168 104_838_11484601_116_36126_009 Sorgh... 110 2e-053
gb|CW087839.1|CW087839 104_432_10947865_114_32552_005 Sorgh... 111 2e-049
gb|CW269978.1|CW269978 104_741_11402142_148_35329_025 Sorgh... 148 6e-049
gb|CW400688.1|CW400688 fsbb001f091c02k0 Sorghum methylation... 108 8e-049
gb|CW300247.1|CW300247 104_783_11463552_116_36252_088 Sorgh... 129 1e-046
gb|CD228332.1|CD228332 CCC1_7_D11.b1_A007 Callus culture/ce... 182 1e-044
gb|BG159292.1|BG159292 OV2_5_H06.g1_A002 Ovary 2 (OV2) Sorg... 179 5e-044
gb|BG159555.1|BG159555 OV2_5_H06.b1_A002 Ovary 2 (OV2) Sorg... 179 5e-044
gb|CN147765.1|CN147765 WOUND1_52_A01.b1_A002 Wounded leaves... 171 1e-041
gb|BG356594.1|BG356594 EM1_24_E01.g1_A002 Embryo 1 (EM1) So... 168 1e-040
gb|BG463311.1|BG463311 EM1_48_A03.g1_A002 Embryo 1 (EM1) So... 161 2e-038
gb|CN135205.1|CN135205 OX1_31_F02.b1_A002 Oxidatively-stres... 154 3e-036
gb|AW287265.2|AW287265 LG1_268_G06.b1_A002 Light Grown 1 (L... 143 4e-033
gb|CW338169.1|CW338169 104_838_11484601_148_36127_009 Sorgh... 142 8e-033
gb|CW300248.1|CW300248 104_783_11463552_148_36251_088 Sorgh... 123 2e-032
gb|CW250502.1|CW250502 104_712_11223425_148_35054_067 Sorgh... 75 1e-030
gb|CL172474.1|CL172474 104_375_10890187_148_31796_091 Sorgh... 105 3e-030
gb|CW109338.1|CW109338 104_481_11098049_116_34505_071 Sorgh... 81 4e-030
gb|CW352664.1|CW352664 fsbb001f015a20k0 Sorghum methylation... 81 1e-028
gb|CW087840.1|CW087840 104_432_10947865_116_32556_005 Sorgh... 90 6e-027
gb|AW284262.1|AW284262 LG1_268_G06.g1_A002 Light Grown 1 (L... 119 8e-026
gb|CN147179.1|CN147179 WOUND1_48_D07.b1_A002 Wounded leaves... 68 7e-023
gb|CX615956.1|CX615956 GABR1_25_A05.b1_A002 GA- or brassino... 66 8e-022
>gb|BQ656122.1|BQ656122 pRC1119 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC1119, mRNA sequence
Length = 862
Score = 398 bits (864), Expect(7) = e-139
Identities = 161/167 (96%), Positives = 164/167 (98%)
Frame = -1 / +1
Query: 761 VIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRDYIDV 582
++ SDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRDYIDV
Sbjct: 91 LLASDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRDYIDV 270
Query: 581 TDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYA 402
TDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYL+RRPGDYA
Sbjct: 271 TDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLSRRPGDYA 450
Query: 401 EVYSDPTKINKELNWTAHYTDLKESLSVAWRWQKSHPRGYGPN*I*P 261
EVYSDPTKINKELNWTA YTDLKESLSVAWRWQKSHP GYGPN*I*P
Sbjct: 451 EVYSDPTKINKELNWTAQYTDLKESLSVAWRWQKSHPHGYGPN*I*P 591
Score = 353 bits (765), Expect(7) = e-117
Identities = 159/164 (96%), Positives = 160/164 (97%)
Frame = +1 / -3
Query: 262 GYI*FGP*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSIL 441
GYI*FGP*P GCDFCHLHATDRLSLRSV *AVQLSSL IFVGSLYTSA*SPGLLLRYSIL
Sbjct: 590 GYI*FGP*PCGCDFCHLHATDRLSLRSVY*AVQLSSLLIFVGSLYTSA*SPGLLLRYSIL 411
Query: 442 MLTPVAFLQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAV 621
MLTPVAFLQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAV
Sbjct: 410 MLTPVAFLQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAV 231
Query: 622 G*SVPLTFNPGMTPNAASKQAPDIRPCSRSSGLGASPNLPSGSD 753
G*SVPLTFNPGMTPNAASK APDIRPCSRSSGLGASPNLPSGS+
Sbjct: 230 G*SVPLTFNPGMTPNAASKHAPDIRPCSRSSGLGASPNLPSGSE 99
Score = 351 bits (761), Expect(5) = e-111
Identities = 151/169 (89%), Positives = 158/169 (93%)
Frame = -3 / +3
Query: 768 FQCYWI*P*GKIR*GS*ARTSRAWSDIWGLL*CSIRSHSRIKG*RNRLSHS*WNLHKRLY 589
F +*P*GKIR*GS*ART RAWSDIWG+L CSIRSHSRI+G*RNRLSHS*WNLHKRLY
Sbjct: 84 FNVIGL*P*GKIR*GS*ARTPRAWSDIWGMLRCSIRSHSRIEG*RNRLSHS*WNLHKRLY 263
Query: 588 *CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSLS**VC*CLQEGNWGQHQN*VPQQKARR 409
*CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSL **VC*CLQE NWG HQN*+PQQKARR
Sbjct: 264 *CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSLG**VC*CLQESNWG*HQN*IPQQKARR 443
Query: 408 LCRSIQRPNKDKQGAQLDSSLYRSQREPISRMEVAKVASAWLRAKLNIA 262
LCRSIQR NKD+QGAQLDSS+YRSQREP+SRMEVAKVASA LRAKLNIA
Sbjct: 444 LCRSIQRSNKDQQGAQLDSSIYRSQREPVSRMEVAKVASARLRAKLNIA 590
Score = 318 bits (688), Expect(5) = e-102
Identities = 129/153 (84%), Positives = 134/153 (87%)
Frame = +3 / -2
Query: 261 RLYLVWPVATRMRLLPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNF 440
RLYLVWPVA RMRLLPPPCD* ALFEIGI+SCPVELLV LCW+AVYFCIISWPS EV NF
Sbjct: 591 RLYLVWPVAVRMRLLPPPCD*QALFEIGILSCPVELLVDLCWIAVYFCIISWPSAEVFNF 412
Query: 441 DVDPSCLLAGINKLIN*ATSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISC 620
DV+PSC LAGINKLIN ATSSCSNIVNADFSRLCLVECFHMS SYAGSISC
Sbjct: 411 DVNPSCFLAGINKLINRATSSCSNIVNADFSRLCLVECFHMSIN*ICDINIISYAGSISC 232
Query: 621 GIICSFNL*SWNDS*CCIKASPRYPTMLSKFWP 719
GIICSFNL SWNDS*CCI+A PRYPTMLS+FWP
Sbjct: 231 GIICSFNLQSWNDS*CCIEACPRYPTMLSEFWP 133
Score = 229 bits (495), Expect(4) = 8e-080
Identities = 102/123 (82%), Positives = 103/123 (83%)
Frame = +2 / -1
Query: 260 QAIFSLARSHADATFATSMRLIGSL*DRYNELSS*APCLSLLGRCILLHNLLAFC*GTQF 439
+AIFSLARS ADATFATSMRL GSL*DRY ELSS*APC SLL RCILLHNLLAFC*G QF
Sbjct: 592 EAIFSLARSRADATFATSMRLTGSL*DRYIELSS*APC*SLLDRCILLHNLLAFC*GIQF 413
Query: 440 *C*PQLPSCRHQQTH*LSDLFLFQHCKCRLF*ALPC*VLSHEXXXXXXXXXXXXCRFHQL 619
*C*PQL SCRHQQTH* SDLFLFQHCKCRLF*ALPC*VLSHE CRFHQL
Sbjct: 412 *C*PQLLSCRHQQTH*PSDLFLFQHCKCRLF*ALPC*VLSHEHQLNL*HQYNLLCRFHQL 233
Query: 620 WDN 628
WDN
Sbjct: 232 WDN 224
Score = 181 bits (389), Expect(7) = 2e-085
Identities = 82/99 (82%), Positives = 85/99 (85%)
Frame = -2 / +2
Query: 556 KHSTRQSLEKSAFTMLEQEEVAQLMSLLMPARRQLGSTSKLSTSTEGQEIMQKYTAXXXX 377
KHSTRQSLEKSAFTMLEQEEVA+LMSLLMPAR+QLG TSKL+TS EGQEIMQKYTA
Sbjct: 296 KHSTRQSLEKSAFTMLEQEEVARLMSLLMPARKQLGLTSKLNTSAEGQEIMQKYTAIQQR 475
Query: 376 XXXXXTGQLIIPISKRAYQSHGGGKSRIRVATGQTKYSL 260
TGQL IPISKRA QSHGGGKSRIR ATGQTKYSL
Sbjct: 476 STRSSTGQLNIPISKRACQSHGGGKSRIRTATGQTKYSL 592
Score = 105 bits (223), Expect(7) = 2e-085
Identities = 49/52 (94%), Positives = 49/52 (94%)
Frame = -2 / +2
Query: 751 LTLRED*VRLLGQNFESMVGYLGLALMQH*ESFQD*RLKEQIIPQLMEPA*E 596
LTLRED*VRLLGQN ESMVGYLG A MQH*ESFQD*RLKEQIIPQLMEPA*E
Sbjct: 101 LTLRED*VRLLGQNSESMVGYLGHASMQH*ESFQD*RLKEQIIPQLMEPA*E 256
Score = 58.8 bits (122), Expect(4) = 8e-080
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +2 / -1
Query: 671 HQSKPQISDHALEVLA*EPHLIFPQGQ 751
H+S PQISDHAL VLA*EPHLIFPQGQ
Sbjct: 181 HRSMPQISDHALGVLA*EPHLIFPQGQ 101
Score = 56.1 bits (116), Expect(7) = e-139
Identities = 27/42 (64%), Positives = 29/42 (69%)
Frame = -3 / +1
Query: 246 HLIVNTY*FFS*RYKILLRYSSKSVLRILLSLVLFISKVCIF 121
H IVNTY*FFS*RYKIL+R + SL LFISKVC F
Sbjct: 592 H*IVNTY*FFS*RYKILVRLLLSKKTLLYSSLFLFISKVCCF 717
Score = 40.0 bits (81), Expect(7) = e-139
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3 / +1
Query: 876 S*ENGRGYHNRFLKLEGS 823
S*ENGRGYH RFLK+EGS
Sbjct: 1 S*ENGRGYHIRFLKVEGS 54
Score = 38.6 bits (78), Expect(4) = 8e-080
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +2 / -1
Query: 56 NNEIVITGPFFHPNHHSCFC*PK 124
N +V FF+PNH SCFC*PK
Sbjct: 784 NEIVVTGPLFFYPNHRSCFC*PK 716
Score = 37.3 bits (75), Expect(5) = e-111
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -1 / +2
Query: 875 AKKMAEDIIIDFSNSKG 825
AKKMAEDII+DFS SKG
Sbjct: 2 AKKMAEDIILDFSKSKG 52
Score = 36.8 bits (74), Expect(7) = e-117
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1 / -2
Query: 196 QDLVSLTKELICIDD 240
QDL+SLTKELICIDD
Sbjct: 642 QDLISLTKELICIDD 598
Score = 35.9 bits (72), Expect(7) = e-117
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3 / -1
Query: 825 SLRV*EIYYDILCHFLS 875
SLR+*EI YDILCHFLS
Sbjct: 52 SLRL*EI*YDILCHFLS 2
Score = 35.4 bits (71), Expect(5) = e-102
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1 / -2
Query: 826 PFEFEKSIMISSAIFLA 876
PF+FEKS MISSAIFLA
Sbjct: 51 PFDFEKSNMISSAIFLA 1
Score = 34.5 bits (69), Expect(7) = 2e-085
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -2 / +3
Query: 874 LRKWQRIS**ISQTRRE 824
LRKWQRIS *ISQ+RRE
Sbjct: 3 LRKWQRISY*ISQSRRE 53
Score = 33.6 bits (67), Expect(5) = e-102
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2 / -3
Query: 191 RSKILYL*LKN*YVLTIK* 247
R+KILY *LKN*YVLTI+*
Sbjct: 647 RTKILYR*LKN*YVLTIQ* 591
Score = 33.6 bits (67), Expect(7) = e-139
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -3 / +2
Query: 843 FLKLEGS*HGCHDFKV 796
F K +G+*HGCHDFK+
Sbjct: 35 FSKSKGA*HGCHDFKI 82
Score = 33.1 bits (66), Expect(5) = e-111
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -3 / +3
Query: 165 ILLSLVLFISKVCIFG*QKHEW*FG*KK 82
+ SL + + FG*QKHE *FG*KK
Sbjct: 675 LFFSLSFYFKGLLFFG*QKHER*FG*KK 758
Score = 32.7 bits (65), Expect(5) = e-102
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1 / -3
Query: 70 HHRSFFSSKSPFMFLLAKNANF*NKKDERKK 162
H F SKSPFMFLLAK K +R++
Sbjct: 770 HRSPFLLSKSPFMFLLAKKQQTFEIKRKREE 678
Score = 32.2 bits (64), Expect(7) = 2e-085
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2 / +2
Query: 124 FWLAET*MVIWMKKRTCDDN 65
FWLAET* VIW+K++ D+
Sbjct: 716 FWLAET*TVIWIKEKGTCDD 775
Score = 32.2 bits (64), Expect(5) = e-111
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -2 / +3
Query: 247 SLNRQYILVL*LEIQDLAA 191
SLNRQYIL+L*L I DL A
Sbjct: 591 SLNRQYILIL*LAI*DLGA 647
Score = 32.2 bits (64), Expect(7) = e-117
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2 / -1
Query: 50 VRNNEIVITGPFFHPNHH 103
VRNNEIV+TGP F +H
Sbjct: 793 VRNNEIVVTGPLFFYPNH 740
Score = 30.9 bits (61), Expect(7) = e-117
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3 / -2
Query: 87 FIQITIHVSASQK 125
FIQIT+HVSASQK
Sbjct: 753 FIQITVHVSASQK 715
Score = 30.4 bits (60), Expect(7) = e-139
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / +2
Query: 88 KKRTCDDNFIVSD 50
+K TCDDNFIVSD
Sbjct: 755 EKGTCDDNFIVSD 793
Score = 30.4 bits (60), Expect(7) = e-139
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -1 / +1
Query: 119 ASRNMNGDLDEKK 81
ASRNMNGDLD++K
Sbjct: 721 ASRNMNGDLDKRK 759
Score = 29.9 bits (59), Expect(4) = 8e-080
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3 / -1
Query: 192 AARSCISN*RTNMY*RLSE 248
A RS I+N*R NMY*R SE
Sbjct: 646 APRSYIAN*RINMY*RFSE 590
Score = 29.9 bits (59), Expect(5) = e-102
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1 / -3
Query: 49 CQKQ*NCHHRSFF 87
CQKQ*NC HRS F
Sbjct: 794 CQKQ*NCRHRSPF 756
Score = 29.5 bits (58), Expect(7) = 2e-085
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / +2
Query: 245 T*SSIHISSLVRDTRSCC 192
T SSIHI+SLV D RS C
Sbjct: 593 TESSIHINSLVSDIRSWC 646
Score = 28.1 bits (55), Expect(5) = e-111
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3 / +3
Query: 87 KKGPVMTISLFLT 49
K+GPV TISLFLT
Sbjct: 756 KRGPVTTISLFLT 794
Score = 24.4 bits (47), Expect(7) = e-117
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / -1
Query: 739 PSGSDPITLKYL 774
P G PITLKYL
Sbjct: 112 PQGQRPITLKYL 77
Score = 24.0 bits (46), Expect(7) = e-117
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / -2
Query: 800 LKS*QPCQLP 829
LKS*QPCQ P
Sbjct: 78 LKS*QPCQAP 49
Score = 23.5 bits (45), Expect(7) = 2e-085
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / +1
Query: 86 KKDL**QFHCF* 51
K DL* QFHCF*
Sbjct: 757 KGDL*RQFHCF* 792
Score = 23.5 bits (45), Expect(7) = 2e-085
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1 / +3
Query: 773 RYFNVIGSDPEGRL 732
RYFNVIG P G++
Sbjct: 78 RYFNVIGL*P*GKI 119
Score = 22.1 bits (42), Expect(7) = e-139
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -3 / +2
Query: 771 IFQCYW 754
IFQCYW
Sbjct: 80 IFQCYW 97
>gb|CN123895.1|CN123895 RHOH1_1_H10.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_1_H10_A002 3', mRNA sequence
Length = 747
Score = 414 bits (899), Expect(6) = e-137
Identities = 168/171 (98%), Positives = 169/171 (98%)
Frame = -1 / +3
Query: 773 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRD 594
RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRD
Sbjct: 39 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRD 218
Query: 593 YIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRP 414
YIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYL+RRP
Sbjct: 219 YIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLSRRP 398
Query: 413 GDYAEVYSDPTKINKELNWTAHYTDLKESLSVAWRWQKSHPRGYGPN*I*P 261
GDYAEVYSDPTKINKELNWTA YTDLKESLSVAWRWQKSHP GYGPN*I*P
Sbjct: 399 GDYAEVYSDPTKINKELNWTAQYTDLKESLSVAWRWQKSHPHGYGPN*I*P 551
Score = 369 bits (801), Expect(5) = e-118
Identities = 166/171 (97%), Positives = 167/171 (97%)
Frame = +1 / -3
Query: 262 GYI*FGP*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSIL 441
GYI*FGP*P GCDFCHLHATDRLSLRSV *AVQLSSL IFVGSLYTSA*SPGLLLRYSIL
Sbjct: 550 GYI*FGP*PCGCDFCHLHATDRLSLRSVY*AVQLSSLLIFVGSLYTSA*SPGLLLRYSIL 371
Query: 442 MLTPVAFLQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAV 621
MLTPVAFLQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAV
Sbjct: 370 MLTPVAFLQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAV 191
Query: 622 G*SVPLTFNPGMTPNAASKQAPDIRPCSRSSGLGASPNLPSGSDPITLKYL 774
G*SVPLTFNPGMTPNAASK APDIRPCSRSSGLGASPNLPSGS+PITLKYL
Sbjct: 190 G*SVPLTFNPGMTPNAASKHAPDIRPCSRSSGLGASPNLPSGSEPITLKYL 38
Score = 369 bits (801), Expect(5) = e-115
Identities = 156/170 (91%), Positives = 163/170 (95%)
Frame = -3 / +2
Query: 771 IFQCYWI*P*GKIR*GS*ARTSRAWSDIWGLL*CSIRSHSRIKG*RNRLSHS*WNLHKRL 592
IFQCYW+*P*GKIR*GS*ART RAWSDIWG+L CSIRSHSRI+G*RNRLSHS*WNLHKRL
Sbjct: 41 IFQCYWL*P*GKIR*GS*ARTPRAWSDIWGMLRCSIRSHSRIEG*RNRLSHS*WNLHKRL 220
Query: 591 Y*CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSLS**VC*CLQEGNWGQHQN*VPQQKAR 412
Y*CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSL **VC*CLQE NWG HQN*+PQQKAR
Sbjct: 221 Y*CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSLG**VC*CLQESNWG*HQN*IPQQKAR 400
Query: 411 RLCRSIQRPNKDKQGAQLDSSLYRSQREPISRMEVAKVASAWLRAKLNIA 262
RLCRSIQR NKD+QGAQLDSS+YRSQREP+SRMEVAKVASA LRAKLNIA
Sbjct: 401 RLCRSIQRSNKDQQGAQLDSSIYRSQREPVSRMEVAKVASARLRAKLNIA 550
Score = 326 bits (707), Expect(4) = e-101
Identities = 135/171 (78%), Positives = 140/171 (81%)
Frame = +3 / -2
Query: 261 RLYLVWPVATRMRLLPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNF 440
RLYLVWPVA RMRLLPPPCD* ALFEIGI+SCPVELLV LCW+AVYFCIISWPS EV NF
Sbjct: 551 RLYLVWPVAVRMRLLPPPCD*QALFEIGILSCPVELLVDLCWIAVYFCIISWPSAEVFNF 372
Query: 441 DVDPSCLLAGINKLIN*ATSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISC 620
DV+PSC LAGINKLIN ATSSCSNIVNADFSRLCLVECFHMS SYAGSISC
Sbjct: 371 DVNPSCFLAGINKLINRATSSCSNIVNADFSRLCLVECFHMSIN*ICDINIISYAGSISC 192
Query: 621 GIICSFNL*SWNDS*CCIKASPRYPTMLSKFWPXXXXXXXXXXXXNNIEIS 773
GIICSFNL SWNDS*CCI+A PRYPTMLS+FWP NNIEIS
Sbjct: 191 GIICSFNLQSWNDS*CCIEACPRYPTMLSEFWPRSLT*SSLRVRANNIEIS 39
Score = 229 bits (495), Expect(6) = 2e-086
Identities = 102/123 (82%), Positives = 103/123 (83%)
Frame = +2 / -1
Query: 260 QAIFSLARSHADATFATSMRLIGSL*DRYNELSS*APCLSLLGRCILLHNLLAFC*GTQF 439
+AIFSLARS ADATFATSMRL GSL*DRY ELSS*APC SLL RCILLHNLLAFC*G QF
Sbjct: 552 EAIFSLARSRADATFATSMRLTGSL*DRYIELSS*APC*SLLDRCILLHNLLAFC*GIQF 373
Query: 440 *C*PQLPSCRHQQTH*LSDLFLFQHCKCRLF*ALPC*VLSHEXXXXXXXXXXXXCRFHQL 619
*C*PQL SCRHQQTH* SDLFLFQHCKCRLF*ALPC*VLSHE CRFHQL
Sbjct: 372 *C*PQLLSCRHQQTH*PSDLFLFQHCKCRLF*ALPC*VLSHEHQLNL*HQYNLLCRFHQL 193
Query: 620 WDN 628
WDN
Sbjct: 192 WDN 184
Score = 181 bits (389), Expect(5) = 2e-083
Identities = 82/99 (82%), Positives = 85/99 (85%)
Frame = -2 / +1
Query: 556 KHSTRQSLEKSAFTMLEQEEVAQLMSLLMPARRQLGSTSKLSTSTEGQEIMQKYTAXXXX 377
KHSTRQSLEKSAFTMLEQEEVA+LMSLLMPAR+QLG TSKL+TS EGQEIMQKYTA
Sbjct: 256 KHSTRQSLEKSAFTMLEQEEVARLMSLLMPARKQLGLTSKLNTSAEGQEIMQKYTAIQQR 435
Query: 376 XXXXXTGQLIIPISKRAYQSHGGGKSRIRVATGQTKYSL 260
TGQL IPISKRA QSHGGGKSRIR ATGQTKYSL
Sbjct: 436 STRSSTGQLNIPISKRACQSHGGGKSRIRTATGQTKYSL 552
Score = 116 bits (248), Expect(5) = 2e-083
Identities = 55/59 (93%), Positives = 55/59 (93%)
Frame = -2 / +1
Query: 772 DISMLLDLTLRED*VRLLGQNFESMVGYLGLALMQH*ESFQD*RLKEQIIPQLMEPA*E 596
DISMLL LTLRED*VRLLGQN ESMVGYLG A MQH*ESFQD*RLKEQIIPQLMEPA*E
Sbjct: 40 DISMLLALTLRED*VRLLGQNSESMVGYLGHASMQH*ESFQD*RLKEQIIPQLMEPA*E 216
Score = 69.3 bits (145), Expect(6) = 2e-086
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +2 / -1
Query: 671 HQSKPQISDHALEVLA*EPHLIFPQGQIQ*H*NI 772
H+S PQISDHAL VLA*EPHLIFPQGQ Q*H*NI
Sbjct: 141 HRSMPQISDHALGVLA*EPHLIFPQGQSQ*H*NI 40
Score = 54.2 bits (112), Expect(6) = e-137
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = -3 / +3
Query: 246 HLIVNTY*FFS*RYKILLRYSSKSVLRILLSLVLF 142
H IVNTY*FFS*RYKIL+RYS K ILLS LF
Sbjct: 552 H*IVNTY*FFS*RYKILVRYSQKKHSFILLSFFLF 656
Score = 44.6 bits (91), Expect(5) = e-118
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / -2
Query: 151 ERKKNTKD*F*GVSQQDLVSLTKELICIDD 240
ER+KN F V+ QDL+SLTKELICIDD
Sbjct: 647 EREKNKGVFFLRVAHQDLISLTKELICIDD 558
Score = 38.6 bits (78), Expect(4) = e-101
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +2 / -2
Query: 56 NNEIVITGPFFHPNHHSCFC*PK 124
N +V FF+PNH SCFC*PK
Sbjct: 740 NEIVVTGPLFFYPNHRSCFC*PK 672
Score = 36.3 bits (73), Expect(5) = e-115
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -2 / +2
Query: 247 SLNRQYILVL*LEIQDLAAILLK 179
SLNRQYIL+L*L I DL A+L K
Sbjct: 551 SLNRQYILIL*LAI*DLGALLSK 619
Score = 36.3 bits (73), Expect(6) = e-137
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +2
Query: 837 KLEGS*HGCHDFKV 796
K+EGS*HGCHDFK+
Sbjct: 2 KVEGS*HGCHDFKI 43
Score = 35.0 bits (70), Expect(4) = e-101
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +2 / -3
Query: 179 FEEYRSKILYL*LKN*YVLTIK* 247
F E R+KILY *LKN*YVLTI+*
Sbjct: 619 F*E*RTKILYR*LKN*YVLTIQ* 551
Score = 33.1 bits (66), Expect(5) = e-115
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -3 / +1
Query: 165 ILLSLVLFISKVCIFG*QKHEW*FG*KK 82
+ SL + + FG*QKHE *FG*KK
Sbjct: 631 LFFSLSFYFKGLLFFG*QKHER*FG*KK 714
Score = 32.7 bits (65), Expect(6) = 2e-086
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1 / -1
Query: 70 HHRSFFSSKSPFMFLLAKNANF*NKKDERKK 162
H F SKSPFMFLLAK K +R++
Sbjct: 726 HRSPFLLSKSPFMFLLAKKQQTFEIKRKREE 634
Score = 32.2 bits (64), Expect(5) = 2e-083
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2 / +3
Query: 124 FWLAET*MVIWMKKRTCDDN 65
FWLAET* VIW+K++ D+
Sbjct: 672 FWLAET*TVIWIKEKGTCDD 731
Score = 30.9 bits (61), Expect(5) = 2e-083
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1 / +1
Query: 245 T*SSIHISSLVRDTRSCCDT 186
T SSIHI+SLV D RS C T
Sbjct: 553 TESSIHINSLVSDIRSWCAT 612
Score = 30.9 bits (61), Expect(6) = 2e-086
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3 / -1
Query: 186 SIAARSCISN*RTNMY*RLSE 248
S A RS I+N*R NMY*R SE
Sbjct: 612 SSAPRSYIAN*RINMY*RFSE 550
Score = 30.9 bits (61), Expect(5) = e-118
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3 / -3
Query: 87 FIQITIHVSASQK 125
FIQIT+HVSASQK
Sbjct: 709 FIQITVHVSASQK 671
Score = 30.4 bits (60), Expect(5) = e-118
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2 / -1
Query: 800 LKS*QPCQLPSSL 838
LKS*QPCQLPS+L
Sbjct: 39 LKS*QPCQLPSTL 1
Score = 30.4 bits (60), Expect(6) = e-137
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -1 / +2
Query: 119 ASRNMNGDLDEKK 81
ASRNMNGDLD++K
Sbjct: 677 ASRNMNGDLDKRK 715
Score = 30.4 bits (60), Expect(5) = e-118
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2 / -2
Query: 53 RNNEIVITGPFFHPNHH 103
RNNEIV+TGP F +H
Sbjct: 746 RNNEIVVTGPLFFYPNH 696
Score = 29.0 bits (57), Expect(4) = e-101
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1 / -3
Query: 799 LKIMTAMSTPFEF 837
LKIMTAMS PF+F
Sbjct: 40 LKIMTAMSAPFDF 2
Score = 29.0 bits (57), Expect(5) = e-115
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2 / +1
Query: 838 QTRRELTWLS*F* 800
Q+RRELTWLS*F*
Sbjct: 1 QSRRELTWLS*F* 39
Score = 27.6 bits (54), Expect(6) = e-137
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / +3
Query: 88 KKRTCDDNFIVS 53
+K TCDDNFIVS
Sbjct: 711 EKGTCDDNFIVS 746
Score = 26.7 bits (52), Expect(6) = 2e-086
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +3 / -2
Query: 801 *NHDSHVNSLRV 836
*NHDSHV+SLR+
Sbjct: 38 *NHDSHVSSLRL 3
Score = 26.7 bits (52), Expect(5) = 2e-083
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / +3
Query: 833 SKGVDMAVMILR 798
SKG DMAVMILR
Sbjct: 6 SKGADMAVMILR 41
Score = 25.8 bits (50), Expect(5) = e-115
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3 / +1
Query: 87 KKGPVMTISLFL 52
K+GPV TISLFL
Sbjct: 712 KRGPVTTISLFL 747
Score = 25.8 bits (50), Expect(6) = 2e-086
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +1 / -1
Query: 52 QKQ*NCHHRSFF 87
QKQ*NC HRS F
Sbjct: 747 QKQ*NCRHRSPF 712
Score = 24.9 bits (48), Expect(6) = e-137
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +2
Query: 156 SLVLFISKVCIF 121
SL LFISKVC F
Sbjct: 638 SLFLFISKVCCF 673
>gb|BE359967.1|BE359967 DG1_60_B02.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 635
Score = 286 bits (619), Expect = 4e-076
Identities = 114/139 (82%), Positives = 123/139 (88%)
Frame = -1 / +1
Query: 692 ISGACFDAALGVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYN 513
ISGACFDAALG+IPGLKVKGTDY T DGTC+RDYIDVTDLVDAHVKALNKA+ +VGIYN
Sbjct: 1 ISGACFDAALGIIPGLKVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAQRGRVGIYN 180
Query: 512 VGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHYTDLK 333
VGTG+GRSV EFVDACKKATGV+IK++Y RRPGDYAEVYSDP KINKELNWTA TDL
Sbjct: 181 VGTGKGRSVKEFVDACKKATGVDIKVDYFPRRPGDYAEVYSDPAKINKELNWTAQRTDLH 360
Query: 332 ESLSVAWRWQKSHPRGYGP 276
ESL VAW WQK+H GY P
Sbjct: 361 ESLRVAWTWQKAHRSGYEP 417
Score = 204 bits (441), Expect = 1e-051
Identities = 100/138 (72%), Positives = 107/138 (77%)
Frame = +1 / -1
Query: 277 GP*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPV 456
G *P C FCH+HAT RLS RSV AVQ SSL I GSLYTSA*SPGL + S LM TPV
Sbjct: 416 GS*PLLCAFCHVHATLRLSWRSVRCAVQFSSLLILAGSLYTSA*SPGLRGK*STLMSTPV 237
Query: 457 AFLQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVP 636
AFLQASTNS T+RP PVPTL +PT ALLSAFT AST+SVTS+*SL QVPS V *SVP
Sbjct: 236 AFLQASTNSFTDRPFPVPTLYIPTLPLCALLSAFTWASTRSVTSM*SLTQVPSGVS*SVP 57
Query: 637 LTFNPGMTPNAASKQAPD 690
LTF PGM P+AASK APD
Sbjct: 56 LTFKPGMIPSAASKHAPD 3
Score = 154 bits (331), Expect = 2e-036
Identities = 69/137 (50%), Positives = 91/137 (66%)
Frame = +3 / -3
Query: 282 VATRMRLLPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNFDVDPSCL 461
+AT +RLLP P AL E+G + PV+LLV L VAVY +++W + EV+N DVD SCL
Sbjct: 411 IATPVRLLPCPRHPEALMEVGALRRPVQLLVDLGRVAVYLRVVAWSAREVVNLDVDSSCL 232
Query: 462 LAGINKLIN*ATSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISCGIICSFN 641
LAGIN+L++* T S +NIV + + LCLVE HM SY ++ C I+ +FN
Sbjct: 231 LAGINELLH*PTFSSANIVYTNSASLCLVERLHMGINKVGDINVISYTSAVRCFIVGTFN 52
Query: 642 L*SWNDS*CCIKASPRY 692
L*+WNDS CC+KA PRY
Sbjct: 51 L*TWNDSQCCVKACPRY 1
Score = 147 bits (315), Expect = 3e-034
Identities = 70/136 (51%), Positives = 93/136 (68%)
Frame = -3 / +3
Query: 690 IWGLL*CSIRSHSRIKG*RNRLSHS*WNLHKRLY*CHRFS*CSCESTQQGRA*KSRHLQC 511
I G+L* S +HSR KG*R RL ++* +L KRL+*CHR *C CE QQG +S ++QC
Sbjct: 3 IGGML*RSTGNHSRFKG*RYRL*NT*RHLCKRLH*CHRPC*CPCEGAQQGTKRQSWYIQC 182
Query: 510 WNRKRSLS**VC*CLQEGNWGQHQN*VPQQKARRLCRSIQRPNKDKQGAQLDSSLYRSQR 331
W+ KRS+S V *CLQEGNW +HQ *+ + RRL IQRP +D+QGA+LD + +R
Sbjct: 183 WHWKRSVSEGVR*CLQEGNWSRHQG*LLPSQTRRLRGGIQRPCQDQQGAELDGAAHRPP* 362
Query: 330 EPISRMEVAKVASAWL 283
EP +++A+ A WL
Sbjct: 363 EPQGGVDMAEGAQEWL 410
>gb|CD233593.1|CD233593 SS1_3_B09.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_3_B09_A012 3', mRNA sequence
Length = 655
Score = 282 bits (611), Expect = 5e-075
Identities = 112/137 (81%), Positives = 121/137 (88%)
Frame = -1 / +1
Query: 686 GACFDAALGVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVG 507
GACFDAALG+IPGLKVKGTDY T DGTC+RDYIDVTDLVDAHVKALNKA+ +VGIYNVG
Sbjct: 1 GACFDAALGIIPGLKVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAQRGRVGIYNVG 180
Query: 506 TGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHYTDLKES 327
TG+GRSV EFVDACKKATGV+IK++Y RRPGDYAEVYSDP KINKELNWTA TDL ES
Sbjct: 181 TGKGRSVKEFVDACKKATGVDIKVDYFPRRPGDYAEVYSDPAKINKELNWTAQRTDLHES 360
Query: 326 LSVAWRWQKSHPRGYGP 276
L VAW WQK+H GY P
Sbjct: 361 LRVAWTWQKAHRSGYEP 411
Score = 199 bits (428), Expect = 8e-050
Identities = 98/136 (72%), Positives = 105/136 (77%)
Frame = +1 / -3
Query: 277 GP*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPV 456
G *P C FCH+HAT RLS RSV AVQ SSL I GSLYTSA*SPGL + S LM TPV
Sbjct: 410 GS*PLLCAFCHVHATLRLSWRSVRCAVQFSSLLILAGSLYTSA*SPGLRGK*STLMSTPV 231
Query: 457 AFLQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVP 636
AFLQASTNS T+RP PVPTL +PT ALLSAFT AST+SVTS+*SL QVPS V *SVP
Sbjct: 230 AFLQASTNSFTDRPFPVPTLYIPTLPLCALLSAFTWASTRSVTSM*SLTQVPSGVS*SVP 51
Query: 637 LTFNPGMTPNAASKQA 684
LTF PGM P+AASK A
Sbjct: 50 LTFKPGMIPSAASKHA 3
Score = 146 bits (313), Expect = 6e-034
Identities = 69/134 (51%), Positives = 92/134 (68%)
Frame = -3 / +3
Query: 684 GLL*CSIRSHSRIKG*RNRLSHS*WNLHKRLY*CHRFS*CSCESTQQGRA*KSRHLQCWN 505
G+L* S +HSR KG*R RL ++* +L KRL+*CHR *C CE QQG +S ++QCW+
Sbjct: 3 GML*RSTGNHSRFKG*RYRL*NT*RHLCKRLH*CHRPC*CPCEGAQQGAKRQSWYIQCWH 182
Query: 504 RKRSLS**VC*CLQEGNWGQHQN*VPQQKARRLCRSIQRPNKDKQGAQLDSSLYRSQREP 325
KRS+S V *CLQEGNW +HQ *+ + RRL IQRP +D+QGA+LD + +R EP
Sbjct: 183 WKRSVSEGVR*CLQEGNWSRHQG*LLPSQTRRLRGGIQRPCQDQQGAELDGAAHRPP*EP 362
Query: 324 ISRMEVAKVASAWL 283
+++A+ A WL
Sbjct: 363 QGGVDMAEGAQEWL 404
Score = 143 bits (307), Expect = 4e-033
Identities = 66/135 (48%), Positives = 88/135 (65%)
Frame = +3 / -2
Query: 282 VATRMRLLPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNFDVDPSCL 461
+AT +RLLP P AL E+G + PV+LLV L VAVY +++W + EV+N DVD SCL
Sbjct: 405 IATPVRLLPCPRHPEALMEVGALRRPVQLLVDLGRVAVYLRVVAWSAREVVNLDVDSSCL 226
Query: 462 LAGINKLIN*ATSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISCGIICSFN 641
LAGIN+L++* T S +NIV + + L LVE HM SY ++ C I+ +FN
Sbjct: 225 LAGINELLH*PTFSSANIVYTNSASLRLVERLHMGINKVGDINVISYTSAVRCFIVGTFN 46
Query: 642 L*SWNDS*CCIKASP 686
L*+WNDS CC+KA P
Sbjct: 45 L*TWNDSQCCVKACP 1
>gb|CL160782.1|CL160782 104_351_10805235_116_31825_291 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805235, DNA
sequence
Length = 717
Score = 123 bits (264), Expect(3) = 2e-070
Identities = 50/54 (92%), Positives = 50/54 (92%)
Frame = -3 / +2
Query: 657 HSRIKG*RNRLSHS*WNLHKRLY*CHRFS*CSCESTQQGRA*KSRHLQCWNRKR 496
H G*RNRLSHS*WNLHKRLY*CHRFS*CSCESTQQGRA*KSRHLQCWNRKR
Sbjct: 461 HDLSVG*RNRLSHS*WNLHKRLY*CHRFS*CSCESTQQGRA*KSRHLQCWNRKR 622
Score = 122 bits (262), Expect(3) = 1e-063
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = -1 / +3
Query: 641 VKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNE 480
VKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRG + +
Sbjct: 477 VKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGLTTRD 638
Score = 111 bits (238), Expect(3) = 2e-070
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = -1 / +2
Query: 773 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKV 639
RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKV
Sbjct: 191 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKV 325
Score = 107 bits (229), Expect(3) = 3e-061
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +1 / -1
Query: 640 TFNPGMTPNAASKQAPDIRPCSRSSGLGASPNLPSGSDPITLKYL 774
TFNPGMTPNAASK APDIRPCSRSSGLGASPNLPSGS+PITLKYL
Sbjct: 324 TFNPGMTPNAASKHAPDIRPCSRSSGLGASPNLPSGSEPITLKYL 190
Score = 105 bits (225), Expect(3) = 3e-061
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +1 / -3
Query: 493 RPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLTF 645
+PLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLT+
Sbjct: 625 KPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLTY 473
Score = 96.8 bits (205), Expect(3) = 1e-063
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = -3 / +1
Query: 771 IFQCYWI*P*GKIR*GS*ARTSRAWSDIWGLL*CSIRSHSRIKG 640
IFQCYW+*P*GKIR*GS*ART RAWSDIWG+L CSIRSHSRI+G
Sbjct: 193 IFQCYWL*P*GKIR*GS*ARTPRAWSDIWGMLRCSIRSHSRIEG 324
Score = 94.5 bits (200), Expect(3) = 4e-046
Identities = 40/50 (80%), Positives = 40/50 (80%)
Frame = +3 / -2
Query: 495 TSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISCGIICSFNL 644
TSSCSNIVNADFSRLCLVECFHMS SYAGSISCGIICSFNL
Sbjct: 623 TSSCSNIVNADFSRLCLVECFHMSIN*ICDINIISYAGSISCGIICSFNL 474
Score = 85.4 bits (180), Expect(4) = 3e-042
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = -2 / +3
Query: 793 NLFFSCIDISMLLDLTLRED*VRLLGQNFESMVGYLGLALMQH*ESFQD*R 641
++ S DISMLL LTLRED*VRLLGQN ESMVGYLG A MQH*ESFQD*R
Sbjct: 171 DILASAPDISMLLALTLRED*VRLLGQNSESMVGYLGHASMQH*ESFQD*R 323
Score = 83.5 bits (176), Expect(3) = 1e-035
Identities = 34/47 (72%), Positives = 35/47 (74%)
Frame = +2 / -1
Query: 488 LSDLFLFQHCKCRLF*ALPC*VLSHEXXXXXXXXXXXXCRFHQLWDN 628
LS+LFLFQHCKCRLF*ALPC*VLSHE CRFHQLWDN
Sbjct: 630 LSNLFLFQHCKCRLF*ALPC*VLSHEHQLNL*HQYNLLCRFHQLWDN 490
Score = 75.3 bits (158), Expect(3) = 2e-070
Identities = 31/37 (83%), Positives = 32/37 (86%)
Frame = -3 / +3
Query: 891 QSIWKS*ENGRGYHNRFLKLEGS*HGCHDFKVRTFSS 781
QSIWKS*EN RGYH RFLK+EGS*HGCHDFKV F S
Sbjct: 3 QSIWKS*ENVRGYHIRFLKVEGS*HGCHDFKVIFFCS 113
Score = 72.1 bits (151), Expect(3) = 4e-046
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +2 / -2
Query: 671 HQSKPQISDHALEVLA*EPHLIFPQGQIQ*H*NIYATEEKV 793
H+S PQISDHAL VLA*EPHLIFPQGQ Q*H*NI+ + V
Sbjct: 293 HRSMPQISDHALGVLA*EPHLIFPQGQSQ*H*NIWCRSQDV 171
Score = 69.8 bits (146), Expect(3) = 1e-035
Identities = 27/42 (64%), Positives = 29/42 (69%)
Frame = +3 / -3
Query: 648 SWNDS*CCIKASPRYPTMLSKFWPXXXXXXXXXXXXNNIEIS 773
SWNDS*CCI+A PRYPTMLS+FWP NNIEIS
Sbjct: 316 SWNDS*CCIEACPRYPTMLSEFWPRSLT*SSLRVRANNIEIS 191
Score = 68.9 bits (144), Expect(3) = 1e-063
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = -1 / +1
Query: 893 INPYGKAKKMAEDIIIDFSNSKGVDMAVMILR 798
INPYGKAKKM+EDII+DFS SKG DMAVMILR
Sbjct: 1 INPYGKAKKMSEDIILDFSKSKGADMAVMILR 96
Score = 66.6 bits (139), Expect(3) = 3e-061
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +3 / -1
Query: 798 P*NHDSHVNSLRV*EIYYDILCHFLSFSIWID 893
P*NHDSHV+SLR+*EI YDIL HFLSFSIWID
Sbjct: 96 P*NHDSHVSSLRL*EI*YDIL*HFLSFSIWID 1
Score = 62.9 bits (131), Expect(3) = 4e-046
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +1 / -2
Query: 799 LKIMTAMSTPFEFEKSIMISSAIFLAFPYGL 891
LKIMTAMS PF+FEKS MISS IFLAFPYGL
Sbjct: 95 LKIMTAMSAPFDFEKSNMISSDIFLAFPYGL 3
Score = 62.0 bits (129), Expect(4) = 3e-042
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = -2 / +2
Query: 892 SIHMEKLRKWQRIS**ISQTRRELTWLS*F*G 797
SIHMEKLRK QRIS *ISQ+RRELTWLS*F*G
Sbjct: 2 SIHMEKLRKCQRISY*ISQSRRELTWLS*F*G 97
Score = 50.1 bits (103), Expect(4) = 3e-042
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = -2 / +1
Query: 556 KHSTRQSLEKSAFTMLEQEEVAQ 488
KHSTRQSLEKSAFTMLEQEEV Q
Sbjct: 562 KHSTRQSLEKSAFTMLEQEEV*Q 630
Score = 40.5 bits (82), Expect(3) = 1e-035
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +2 / -3
Query: 785 EKVLTLKS*QPCQLPSSLRN 844
+K +TLKS*QPCQLPS+LRN
Sbjct: 109 QKNITLKS*QPCQLPSTLRN 50
Score = 37.3 bits (75), Expect(4) = 3e-042
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -2 / +1
Query: 643 RLKEQIIPQLMEPA*E 596
RLKEQIIPQLMEPA*E
Sbjct: 475 RLKEQIIPQLMEPA*E 522
>gb|BG049722.1|BG049722 EM1_8_C12.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 620
Score = 263 bits (568), Expect = 4e-069
Identities = 104/129 (80%), Positives = 113/129 (87%)
Frame = -1 / +3
Query: 662 GVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVN 483
G+IPGLKVKGTDY T DGTC+RDYIDVTDLVDAHVKALNKA+ +VGIYNVGTG+GRSV
Sbjct: 3 GIIPGLKVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAQRGRVGIYNVGTGKGRSVK 182
Query: 482 EFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHYTDLKESLSVAWRWQ 303
EFVDACKKATGV+IK++Y RRPGDYAEVYSDP KINKELNWTA TDL ESL VAW WQ
Sbjct: 183 EFVDACKKATGVDIKVDYFPRRPGDYAEVYSDPAKINKELNWTAQRTDLHESLRVAWTWQ 362
Query: 302 KSHPRGYGP 276
K+H GY P
Sbjct: 363 KAHRSGYEP 389
Score = 188 bits (406), Expect = 9e-047
Identities = 93/129 (72%), Positives = 99/129 (76%)
Frame = +1 / -2
Query: 277 GP*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPV 456
G *P C FCH+HAT RLS RSV AVQ SSL I GSLYTSA*SPGL + S LM TPV
Sbjct: 388 GS*PLLCAFCHVHATLRLSWRSVRCAVQFSSLLILAGSLYTSA*SPGLRGK*STLMSTPV 209
Query: 457 AFLQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVP 636
AFLQASTNS T+RP PVPTL +PT ALLSAFT AST+SVTS+*SL QVPS V *SVP
Sbjct: 208 AFLQASTNSFTDRPFPVPTLYIPTLPLCALLSAFTWASTRSVTSM*SLTQVPSGVS*SVP 29
Query: 637 LTFNPGMTP 663
LTF PGM P
Sbjct: 28 LTFKPGMIP 2
Score = 141 bits (302), Expect = 2e-032
Identities = 65/126 (51%), Positives = 87/126 (69%)
Frame = -3 / +2
Query: 660 SHSRIKG*RNRLSHS*WNLHKRLY*CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSLS** 481
+HSR KG*R RL ++* +L KRL+*CHR *C CE QQG +S ++QCW+ KRS+S
Sbjct: 5 NHSRFKG*RYRL*NT*RHLCKRLH*CHRPC*CPCEGAQQGTKRQSWYIQCWHWKRSVSEG 184
Query: 480 VC*CLQEGNWGQHQN*VPQQKARRLCRSIQRPNKDKQGAQLDSSLYRSQREPISRMEVAK 301
V *CLQEGNW +HQ *+ + RRL IQRP +D+QGA+LD + +R EP +++A+
Sbjct: 185 VR*CLQEGNWSRHQG*LLPSQTRRLRGGIQRPCQDQQGAELDGAAHRPP*EPQGGVDMAE 364
Query: 300 VASAWL 283
A WL
Sbjct: 365 GAQEWL 382
Score = 134 bits (287), Expect = 2e-030
Identities = 62/127 (48%), Positives = 83/127 (65%)
Frame = +3 / -1
Query: 282 VATRMRLLPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNFDVDPSCL 461
+AT +RLLP P AL E+G + PV+LLV L VAVY +++W + EV+N DVD SCL
Sbjct: 383 IATPVRLLPCPRHPEALMEVGALRRPVQLLVDLGRVAVYLRVVAWSAREVVNLDVDSSCL 204
Query: 462 LAGINKLIN*ATSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISCGIICSFN 641
LAGIN+L++* T S +NIV + + LCLVE HM SY ++ C I+ +FN
Sbjct: 203 LAGINELLH*PTFSSANIVYTNSASLCLVERLHMGINKVGDINVISYTSAVRCFIVGTFN 24
Query: 642 L*SWNDS 662
L*+WNDS
Sbjct: 23 L*TWNDS 3
>gb|CL190298.1|CL190298 104_408_10905986_114_32484_009 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10905986, DNA
sequence
Length = 689
Score = 114 bits (244), Expect(3) = 2e-066
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = -1 / -3
Query: 785 LQLHRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVK 636
L +RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALG+IPGLKV+
Sbjct: 450 LHCYRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVR 301
Score = 107 bits (229), Expect(3) = 2e-066
Identities = 43/56 (76%), Positives = 49/56 (87%)
Frame = -1 / -2
Query: 647 LKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNE 480
L+VKGTDY T DGTC+RDYIDVTDLVDAHVKALNKA+ +VGIYNVGTG+G +E
Sbjct: 184 LQVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAQRGRVGIYNVGTGKGHVSSE 17
Score = 97.3 bits (206), Expect(3) = 3e-048
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = +1 / +2
Query: 640 TFNPGMTPNAASKQAPDIRPCSRSSGLGASPNLPSGSDPITLKYL 774
TF PGM P+AASK APDIRPCSR+SGLGASPNLPSGS+P+TLKYL
Sbjct: 305 TFKPGMIPSAASKHAPDIRPCSRNSGLGASPNLPSGSEPMTLKYL 439
Score = 72.5 bits (152), Expect(3) = 3e-048
Identities = 36/49 (73%), Positives = 39/49 (79%)
Frame = +1 / +3
Query: 496 PLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLT 642
P PVPTL +PT ALLSAFT AST+SVTS+*SL QVPS V *SVPLT
Sbjct: 33 PFPVPTLYIPTLPLCALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLT 179
Score = 71.2 bits (149), Expect(3) = 2e-066
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = -1 / -1
Query: 899 FPINPYGKAKKMAEDIIIDFSNSKGVDMAVMILRLEPFLQLHRY 768
FPINPYG+ KKMAEDII+DFS SK DMAVMILRL+ + +Y
Sbjct: 635 FPINPYGRPKKMAEDIILDFSKSKRSDMAVMILRLDYSPRYQKY 504
Score = 66.6 bits (139), Expect(3) = 3e-048
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +1 / +1
Query: 793 SNLKIMTAMSTPFEFEKSIMISSAIFLAFPYGLIGN 900
SNL+IMTAMS F+FEKS MISSAIFL PYGLIGN
Sbjct: 529 SNLRIMTAMSDLFDFEKSKMISSAIFLGLPYGLIGN 636
Score = 61.1 bits (127), Expect(3) = 2e-024
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = -3 / -1
Query: 642 G*RNRLSHS*WNLHKRLY*CHRFS*CSCESTQQGRA*KSRHLQCWNRKRS 493
G*R RL ++* +L KRL+*CHR *C CE QQG +S ++QCW+ KRS
Sbjct: 179 G*RYRL*NT*RHLCKRLH*CHRPC*CPCEGAQQGTKRQSWYIQCWHWKRS 30
Score = 51.9 bits (107), Expect(3) = 2e-021
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +3 / +3
Query: 798 P*NHDSHVNSLRV*EIYYDILCHFLSFSIWIDREL 902
P*NHDSHV SL +*E+ DIL HFL +IW+DR+L
Sbjct: 534 P*NHDSHV*SL*L*EV*DDILRHFLGPTIWVDRKL 638
Score = 51.5 bits (106), Expect(3) = 2e-021
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3 / +1
Query: 642 L*SWNDS*CCIKASPRYPTMLSKFWPXXXXXXXXXXXXNNIEISMQLK 785
L*+WNDS CC+KA PRY ML++F N+IE+S+ ++
Sbjct: 307 L*TWNDSQCCVKACPRYTAMLTQFRSRSFTQSAFWVRTNDIEVSIAVQ 450
Score = 51.0 bits (105), Expect(3) = 2e-024
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = -3 / -3
Query: 891 QSIWKS*ENGRGYHNRFLKLEGS*HGCHDFKVRTFSSVA 775
Q IW + ENG GYH R LK++ HGCHD KV F+ ++
Sbjct: 627 QPIW*AQENGGGYHLRLLKVKEIRHGCHDSKVGLFTKIS 511
Score = 43.7 bits (89), Expect(3) = 2e-024
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = -3 / -2
Query: 783 SVA*IFQCYWI*P*GKIR*GS*ARTSRAWSDIWGLL*CSIRSHSRIKG 640
++ *I QC+W *P +I * S* + AW I G+L* S +HSR KG
Sbjct: 448 ALL*ILQCHWF*PRRQIG*SS*T*IA*AWPYIGGML*RSTGNHSRFKG 305
Score = 41.8 bits (85), Expect(3) = 2e-021
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3 / +2
Query: 495 TSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISCGIICSFNL 644
T S +NIV + + LCLVE HM SY ++ C I+ +FNL
Sbjct: 32 TFSSANIVYTNSASLCLVERLHMGINKVGDINVISYTSAVRCFIVGTFNL 181
>gb|CL160781.1|CL160781 104_351_10805235_114_31824_291 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805235, DNA
sequence
Length = 632
Score = 185 bits (398), Expect(5) = 7e-063
Identities = 73/79 (92%), Positives = 76/79 (96%)
Frame = -1 / -1
Query: 497 GRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHYTDLKESLSV 318
GRSVNEFVDACKKA GVNIKI+YL+RRPGDYA+VYSDPTKINKELNWTA YTDLKESLSV
Sbjct: 629 GRSVNEFVDACKKAIGVNIKIDYLSRRPGDYADVYSDPTKINKELNWTAQYTDLKESLSV 450
Query: 317 AWRWQKSHPRGYGPN*I*P 261
AWRWQKSHP GYGPN*I*P
Sbjct: 449 AWRWQKSHPHGYGPN*I*P 393
Score = 167 bits (359), Expect(4) = 7e-054
Identities = 66/79 (83%), Positives = 71/79 (89%)
Frame = +3 / +3
Query: 261 RLYLVWPVATRMRLLPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNF 440
RLYLVWPVA RMRLLPPPCD* ALFEIGI+SCPVELLV LCW+AVY CIISWPS EV+NF
Sbjct: 393 RLYLVWPVAVRMRLLPPPCD*QALFEIGILSCPVELLVDLCWIAVYICIISWPSAEVINF 572
Query: 441 DVDPSCLLAGINKLIN*AT 497
DV+P+C LAGINKLIN T
Sbjct: 573 DVNPNCFLAGINKLINRTT 629
Score = 164 bits (352), Expect(4) = 1e-051
Identities = 74/79 (93%), Positives = 75/79 (94%)
Frame = +1 / +1
Query: 262 GYI*FGP*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSIL 441
GYI*FGP*P GCDFCHLHATDRLSLRSV *AVQLSSL IFVGSLYTSA*SPGLLLR SIL
Sbjct: 394 GYI*FGP*PCGCDFCHLHATDRLSLRSVY*AVQLSSLLIFVGSLYTSA*SPGLLLR*SIL 573
Query: 442 MLTPVAFLQASTNSLTERP 498
MLTP+AFLQASTNSLTERP
Sbjct: 574 MLTPIAFLQASTNSLTERP 630
Score = 155 bits (334), Expect(4) = 4e-049
Identities = 68/79 (86%), Positives = 72/79 (91%)
Frame = -3 / -3
Query: 498 RSLS**VC*CLQEGNWGQHQN*VPQQKARRLCRSIQRPNKDKQGAQLDSSLYRSQREPIS 319
RS **VC*CLQE NWG HQN*+PQQKARRLCR IQR NKD+QGAQLDSS+YRSQREP+S
Sbjct: 630 RSFG**VC*CLQESNWG*HQN*LPQQKARRLCRCIQRSNKDQQGAQLDSSIYRSQREPVS 451
Query: 318 RMEVAKVASAWLRAKLNIA 262
RMEVAKVASA LRAKLNIA
Sbjct: 450 RMEVAKVASARLRAKLNIA 394
Score = 150 bits (323), Expect(3) = 1e-044
Identities = 69/80 (86%), Positives = 71/80 (88%)
Frame = +2 / +2
Query: 260 QAIFSLARSHADATFATSMRLIGSL*DRYNELSS*APCLSLLGRCILLHNLLAFC*GTQF 439
+AIFSLARS ADATFATSMRL GSL*DRY ELSS*APC SLL RCI LHNLLAFC*G QF
Sbjct: 392 EAIFSLARSRADATFATSMRLTGSL*DRYIELSS*APC*SLLDRCIHLHNLLAFC*GNQF 571
Query: 440 *C*PQLPSCRHQQTH*LSDL 499
*C*PQL SCRHQQTH* +DL
Sbjct: 572 *C*PQLLSCRHQQTH*PNDL 631
Score = 131 bits (280), Expect(4) = 1e-038
Identities = 60/80 (75%), Positives = 63/80 (78%)
Frame = -2 / -2
Query: 499 EVAQLMSLLMPARRQLGSTSKLSTSTEGQEIMQKYTAXXXXXXXXXTGQLIIPISKRAYQ 320
+V +LMSLLMPAR+QLG TSKL TS EGQEIMQ YTA TGQL IPISKRA Q
Sbjct: 631 QVVRLMSLLMPARKQLGLTSKLITSAEGQEIMQMYTAIQQRSTRSSTGQLNIPISKRACQ 452
Query: 319 SHGGGKSRIRVATGQTKYSL 260
SHGGGKSRIR ATGQTKYSL
Sbjct: 451 SHGGGKSRIRTATGQTKYSL 392
Score = 46.9 bits (96), Expect(5) = 7e-063
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = -3 / -1
Query: 246 HLIVNTY*FFS*RYKILLRYSSKS 175
H IVNTY*FFS*RYKIL+RYS K+
Sbjct: 392 H*IVNTY*FFS*RYKILVRYSQKN 321
Score = 39.1 bits (79), Expect(4) = 7e-054
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +1 / +3
Query: 187 VSQQDLVSLTKELICIDD 240
V+ QDL+SLTKELICIDD
Sbjct: 333 VAHQDLISLTKELICIDD 386
Score = 38.6 bits (78), Expect(3) = 1e-044
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +2 / +1
Query: 56 NNEIVITGPFFHPNHHSCFC*PK 124
N +V FF+PNH SCFC*PK
Sbjct: 205 NEIVVTGPLFFYPNHRSCFC*PK 273
Score = 36.3 bits (73), Expect(4) = 4e-049
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -2 / -3
Query: 247 SLNRQYILVL*LEIQDLAAILLK 179
SLNRQYIL+L*L I DL A+L K
Sbjct: 393 SLNRQYILIL*LAI*DLGALLSK 325
Score = 35.0 bits (70), Expect(4) = 1e-051
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +2 / +1
Query: 179 FEEYRSKILYL*LKN*YVLTIK* 247
F E R+KILY *LKN*YVLTI+*
Sbjct: 325 F*E*RTKILYR*LKN*YVLTIQ* 393
Score = 33.1 bits (66), Expect(4) = 4e-049
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -3 / -1
Query: 165 ILLSLVLFISKVCIFG*QKHEW*FG*KK 82
+ SL + + FG*QKHE *FG*KK
Sbjct: 314 LFFSLSFYFKGLLFFG*QKHER*FG*KK 231
Score = 32.7 bits (65), Expect(4) = 1e-051
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1 / +3
Query: 70 HHRSFFSSKSPFMFLLAKNANF*NKKDERKK 162
H F SKSPFMFLLAK K +R++
Sbjct: 219 HRSPFLLSKSPFMFLLAKKQQTFEIKRKREE 311
Score = 32.2 bits (64), Expect(4) = 1e-038
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2 / -3
Query: 124 FWLAET*MVIWMKKRTCDDN 65
FWLAET* VIW+K++ D+
Sbjct: 273 FWLAET*TVIWIKEKGTCDD 214
Score = 32.2 bits (64), Expect(4) = 7e-054
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2 / +1
Query: 50 VRNNEIVITGPFFHPNHH 103
VRNNEIV+TGP F +H
Sbjct: 196 VRNNEIVVTGPLFFYPNH 249
Score = 30.9 bits (61), Expect(3) = 1e-044
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3 / +2
Query: 186 SIAARSCISN*RTNMY*RLSE 248
S A RS I+N*R NMY*R SE
Sbjct: 332 SSAPRSYIAN*RINMY*RFSE 394
Score = 30.9 bits (61), Expect(4) = 1e-038
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1 / -2
Query: 245 T*SSIHISSLVRDTRSCCDT 186
T SSIHI+SLV D RS C T
Sbjct: 391 TESSIHINSLVSDIRSWCAT 332
Score = 30.9 bits (61), Expect(4) = 7e-054
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3 / +2
Query: 87 FIQITIHVSASQK 125
FIQIT+HVSASQK
Sbjct: 236 FIQITVHVSASQK 274
Score = 30.4 bits (60), Expect(5) = 7e-063
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / -3
Query: 88 KKRTCDDNFIVSD 50
+K TCDDNFIVSD
Sbjct: 234 EKGTCDDNFIVSD 196
Score = 30.4 bits (60), Expect(5) = 7e-063
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -1 / -2
Query: 119 ASRNMNGDLDEKK 81
ASRNMNGDLD++K
Sbjct: 268 ASRNMNGDLDKRK 230
Score = 29.9 bits (59), Expect(4) = 1e-051
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 49 CQKQ*NCHHRSFF 87
CQKQ*NC HRS F
Sbjct: 195 CQKQ*NCRHRSPF 233
Score = 28.1 bits (55), Expect(4) = 4e-049
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3 / -1
Query: 87 KKGPVMTISLFLT 49
K+GPV TISLFLT
Sbjct: 233 KRGPVTTISLFLT 195
Score = 24.9 bits (48), Expect(5) = 7e-063
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 156 SLVLFISKVCIF 121
SL LFISKVC F
Sbjct: 307 SLFLFISKVCCF 272
Score = 23.5 bits (45), Expect(4) = 1e-038
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -2
Query: 86 KKDL**QFHCF* 51
K DL* QFHCF*
Sbjct: 232 KGDL*RQFHCF* 197
>gb|CW352663.1|CW352663 fsbb001f015a20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f015a20, DNA
sequence
Length = 711
Score = 114 bits (244), Expect(3) = 3e-058
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = -1 / -3
Query: 785 LQLHRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVK 636
L +RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALG+IPGLKV+
Sbjct: 154 LHCYRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVR 5
Score = 97.3 bits (206), Expect(3) = 6e-042
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = +1 / +3
Query: 640 TFNPGMTPNAASKQAPDIRPCSRSSGLGASPNLPSGSDPITLKYL 774
TF PGM P+AASK APDIRPCSR+SGLGASPNLPSGS+P+TLKYL
Sbjct: 9 TFKPGMIPSAASKHAPDIRPCSRNSGLGASPNLPSGSEPMTLKYL 143
Score = 80.8 bits (170), Expect(3) = 3e-058
Identities = 31/38 (81%), Positives = 36/38 (94%)
Frame = -1 / -1
Query: 1016 TLLILEAMASHGVQTLIYSSTCATYGEPDKMPITEATP 903
TL++LEAMA+H V+TLIYSSTCATYGEP+KMPITE TP
Sbjct: 597 TLVVLEAMATHNVKTLIYSSTCATYGEPEKMPITEGTP 484
Score = 74.8 bits (157), Expect(3) = 3e-058
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = -1 / -1
Query: 899 FPINPYGKAKKMAEDIIIDFSNSKGVDMAVMILRLEPFLQLHRY 768
FPINPYGKAKKMAEDII+DFS SK DMAVMILRL+ + +Y
Sbjct: 339 FPINPYGKAKKMAEDIILDFSKSKRSDMAVMILRLDYSPRYQKY 208
Score = 68.4 bits (143), Expect(3) = 6e-042
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = +1 / +2
Query: 793 SNLKIMTAMSTPFEFEKSIMISSAIFLAFPYGLIGN 900
SNL+IMTAMS F+FEKS MISSAIFLA PYGLIGN
Sbjct: 233 SNLRIMTAMSDLFDFEKSKMISSAIFLALPYGLIGN 340
Score = 49.6 bits (102), Expect(3) = 6e-042
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +1 / +2
Query: 904 GVASVIGILSGSP*VAHVLE*IRVWTP*DAIAS 1002
GV SV+GI SGSP*VAHVLE*+RV+T AIAS
Sbjct: 485 GVPSVMGIFSGSP*VAHVLE*MRVFTLCVAIAS 583
>gb|CN126287.1|CN126287 RHOH1_16_F09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_16_F09_A002 3', mRNA sequence
Length = 812
Score = 223 bits (481), Expect = 4e-057
Identities = 88/108 (81%), Positives = 97/108 (89%)
Frame = -1 / +2
Query: 602 IRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLN 423
IRDYIDVTDLVDAHVKAL KAEP KVGIYNVGTG+GRSVNEFV AC KATG +IK+EYL
Sbjct: 2 IRDYIDVTDLVDAHVKALGKAEPGKVGIYNVGTGQGRSVNEFVKACMKATGASIKVEYLA 181
Query: 422 RRPGDYAEVYSDPTKINKELNWTAHYTDLKESLSVAWRWQKSHPRGYG 279
RRPGDYAEVYSDP+KI K+LNWTA YTDL +SL+ AW+WQK+HP GYG
Sbjct: 182 RRPGDYAEVYSDPSKIYKDLNWTAQYTDLGQSLAQAWKWQKAHPNGYG 325
Score = 149 bits (320), Expect = 6e-035
Identities = 75/108 (69%), Positives = 80/108 (74%)
Frame = +1 / -3
Query: 280 P*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVA 459
P P GC FCH HA RL RSV AVQL SL IF GSLYTSA*SPGL RYS LM PVA
Sbjct: 324 PYPFGCAFCHFHAWARLWPRSVYWAVQLRSL*IFDGSLYTSA*SPGLRARYSTLMEAPVA 145
Query: 460 FLQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLM 603
F+QA TNS T+ P PVPTL*+PT GSAL A T AST+SVTS+*SLM
Sbjct: 144 FMQAFTNSFTDLPCPVPTL*IPTLPGSALPRALTWASTRSVTSM*SLM 1
>gb|CL172473.1|CL172473 104_375_10890187_116_31797_091 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890187, DNA
sequence
Length = 677
Score = 136 bits (291), Expect(2) = 6e-057
Identities = 53/73 (72%), Positives = 59/73 (80%)
Frame = -1 / -2
Query: 497 GRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHYTDLKESLSV 318
G SV EFV+ACKK TGVNIK+E+L RPGDYAEVYSDPTKIN+EL W+A DL+ES
Sbjct: 331 GSSVKEFVEACKKDTGVNIKVEFLPCRPGDYAEVYSDPTKINRELKWSAQRNDLEESFRT 152
Query: 317 AWRWQKSHPRGYG 279
AWRWQKSH GYG
Sbjct: 151 AWRWQKSHRDGYG 113
Score = 106 bits (227), Expect(2) = 6e-057
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = -1 / -1
Query: 647 LKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSV 486
L+V+GTDY T+DGTCI DYIDVTDLVDAHVKAL KA P KVGI+NVGTG+GR +
Sbjct: 575 LQVRGTDYKTSDGTCIGDYIDVTDLVDAHVKALEKAHPAKVGIFNVGTGKGRFI 414
Score = 97.3 bits (206), Expect(2) = 3e-035
Identities = 48/73 (65%), Positives = 51/73 (69%)
Frame = +1 / +3
Query: 280 P*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVA 459
P P DFCHLHA +LS RS+ A SS IFVGSLYTSA*SPG R S LM TPV+
Sbjct: 114 PYPSR*DFCHLHAVRKLSSRSLRCADHFSSRLIFVGSLYTSA*SPGRQGRNSTLMFTPVS 293
Query: 460 FLQASTNSLTERP 498
FLQASTNS TE P
Sbjct: 294 FLQASTNSFTELP 332
Score = 73.5 bits (154), Expect(2) = 3e-035
Identities = 37/54 (68%), Positives = 40/54 (74%)
Frame = +1 / +1
Query: 481 SLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLT 642
S+ P PVPTL +PT G A AFT*AST+SVTSI*S MQVPS V *SVPLT
Sbjct: 409 SIMNLPFPVPTLKIPTLAGCAFSRAFT*ASTRSVTSI*SPMQVPSLVL*SVPLT 570
>gb|BG739395.1|BG739395 EM1_82_D08.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 574
Score = 219 bits (473), Expect = 5e-056
Identities = 88/111 (79%), Positives = 96/111 (86%)
Frame = -1 / +3
Query: 608 TCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEY 429
T +RDYIDVTDLVDAHVKALNKA+ +VGIYNVGTG+GRSV EFVDACKKATGV+IK++Y
Sbjct: 3 TRVRDYIDVTDLVDAHVKALNKAQRGRVGIYNVGTGKGRSVKEFVDACKKATGVDIKVDY 182
Query: 428 LNRRPGDYAEVYSDPTKINKELNWTAHYTDLKESLSVAWRWQKSHPRGYGP 276
RRPGDYAEVYSDP KINKELNWTA TDL ESL VAW WQK+H GY P
Sbjct: 183 FPRRPGDYAEVYSDPAKINKELNWTAQRTDLHESLRVAWTWQKAHRSGYEP 335
Score = 155 bits (332), Expect = 1e-036
Identities = 78/111 (70%), Positives = 85/111 (76%)
Frame = +1 / -1
Query: 277 GP*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPV 456
G *P C FCH+HAT RLS RSV AVQ SSL I GSLYTSA*SPGL + S LM TPV
Sbjct: 334 GS*PLLCAFCHVHATLRLSWRSVRCAVQFSSLLILAGSLYTSA*SPGLRGK*STLMSTPV 155
Query: 457 AFLQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQV 609
AFLQASTNS T+RP PVPTL +PT ALLSAFT AST+SVTS+*SL +V
Sbjct: 154 AFLQASTNSFTDRPFPVPTLYIPTLPLCALLSAFTWASTRSVTSM*SLTRV 2
Score = 122 bits (262), Expect = 6e-027
Identities = 54/106 (50%), Positives = 72/106 (67%)
Frame = -3 / +2
Query: 600 KRLY*CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSLS**VC*CLQEGNWGQHQN*VPQQ 421
KRL+*CHR *C CE QQG +S ++QCW+ KRS+S V *CLQEGNW +HQ *+
Sbjct: 11 KRLH*CHRPC*CPCEGAQQGTKRQSWYIQCWHWKRSVSEGVR*CLQEGNWSRHQG*LLPS 190
Query: 420 KARRLCRSIQRPNKDKQGAQLDSSLYRSQREPISRMEVAKVASAWL 283
+ RRL IQRP +D+QGA+LD + +R EP +++A+ A WL
Sbjct: 191 QTRRLRGGIQRPCQDQQGAELDGAAHRPP*EPQGGVDMAEGAQEWL 328
Score = 107 bits (228), Expect = 3e-022
Identities = 52/107 (48%), Positives = 68/107 (63%)
Frame = +3 / -3
Query: 282 VATRMRLLPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNFDVDPSCL 461
+AT +RLLP P AL E+G + PV+LLV L VAVY +++W + EV+N DVD SCL
Sbjct: 329 IATPVRLLPCPRHPEALMEVGALRRPVQLLVDLGRVAVYLRVVAWSAREVVNLDVDSSCL 150
Query: 462 LAGINKLIN*ATSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSY 602
LAGIN+L++* T S +NIV + + LCLVE HM SY
Sbjct: 149 LAGINELLH*PTFSSANIVYTNSASLCLVERLHMGINKVGDINVISY 9
>gb|CW338168.1|CW338168 104_838_11484601_116_36126_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484601, DNA
sequence
Length = 621
Score = 110 bits (235), Expect(3) = 2e-053
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = -1 / +2
Query: 494 RSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHYTDLKESLSVA 315
RSV +FV AC ATG +IK+EYL RRPGDYAEVYSDP+KI K+LNWT YTDL +SL+ A
Sbjct: 437 RSVKDFVKACMNATGASIKVEYLARRPGDYAEVYSDPSKIYKDLNWTVQYTDLGQSLAHA 616
Query: 314 W 312
W
Sbjct: 617 W 619
Score = 104 bits (222), Expect(3) = 2e-053
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = -1 / +3
Query: 644 KVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRG 495
+V+GTDYPTA GTCIRDYIDVTDLVDAHVKAL KAEP KVGIY+V TG+G
Sbjct: 162 QVRGTDYPTAHGTCIRDYIDVTDLVDAHVKALGKAEPGKVGIYHVRTGQG 311
Score = 75.8 bits (159), Expect(3) = 7e-033
Identities = 40/60 (66%), Positives = 42/60 (70%)
Frame = +1 / -1
Query: 313 HATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVAFLQASTNSLTE 492
HA RL RSV VQL SL IF GSLYTSA*SPGL RYS LM PVAF+QA T S T+
Sbjct: 618 HAWARLWPRSVYWTVQLRSL*IFDGSLYTSA*SPGLRARYSTLMEAPVAFMQAFTKSFTD 439
Score = 72.1 bits (151), Expect(3) = 7e-033
Identities = 36/51 (70%), Positives = 41/51 (80%)
Frame = +1 / -3
Query: 490 ERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLT 642
++P PV T *+PT GSAL SA T AST+SVTS+*SLMQVP AVG*SVP T
Sbjct: 316 QQPCPVRTW*IPTLPGSALPSALTWASTRSVTSM*SLMQVPCAVG*SVPRT 164
Score = 38.6 bits (78), Expect(3) = 2e-053
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1 / +2
Query: 686 GACFDAALGVIPGLKV 639
GACFDA LG+IPGLKV
Sbjct: 2 GACFDATLGIIPGLKV 49
Score = 32.7 bits (65), Expect(3) = 7e-033
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1 / -1
Query: 640 TFNPGMTPNAASKQAP 687
TF+PGM P ASKQAP
Sbjct: 48 TFSPGMIPRVASKQAP 1
>gb|CW087839.1|CW087839 104_432_10947865_114_32552_005 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10947865, DNA
sequence
Length = 739
Score = 111 bits (238), Expect(3) = 2e-049
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = -1 / -1
Query: 773 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKV 639
RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKV
Sbjct: 328 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKV 194
Score = 107 bits (229), Expect(3) = 1e-045
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +1 / +3
Query: 640 TFNPGMTPNAASKQAPDIRPCSRSSGLGASPNLPSGSDPITLKYL 774
TFNPGMTPNAASK APDIRPCSRSSGLGASPNLPSGS+PITLKYL
Sbjct: 195 TFNPGMTPNAASKHAPDIRPCSRSSGLGASPNLPSGSEPITLKYL 329
Score = 96.8 bits (205), Expect(3) = 8e-041
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = -3 / -3
Query: 771 IFQCYWI*P*GKIR*GS*ARTSRAWSDIWGLL*CSIRSHSRIKG 640
IFQCYW+*P*GKIR*GS*ART RAWSDIWG+L CSIRSHSRI+G
Sbjct: 326 IFQCYWL*P*GKIR*GS*ARTPRAWSDIWGMLRCSIRSHSRIEG 195
Score = 89.5 bits (189), Expect(3) = 2e-049
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = -3 / -2
Query: 903 LVPYQSIWKS*ENGRGYHNRFLKLEGS*HGCHDFKVRTFSS 781
LVPYQSIWKS*ENGRGYH RFLK+EGS*HGCHDFKV F S
Sbjct: 528 LVPYQSIWKS*ENGRGYHIRFLKVEGS*HGCHDFKVIFFCS 406
Score = 85.4 bits (180), Expect(3) = 2e-036
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = -2 / -2
Query: 793 NLFFSCIDISMLLDLTLRED*VRLLGQNFESMVGYLGLALMQH*ESFQD*R 641
++ S DISMLL LTLRED*VRLLGQN ESMVGYLG A MQH*ESFQD*R
Sbjct: 348 DILASAPDISMLLALTLRED*VRLLGQNSESMVGYLGHASMQH*ESFQD*R 196
Score = 79.9 bits (168), Expect(3) = 1e-045
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +3 / +3
Query: 798 P*NHDSHVNSLRV*EIYYDILCHFLSFSIWIDRELRCG 911
P*NHDSHV+SLR+*EI YDILCHFLSFSIWIDREL G
Sbjct: 423 P*NHDSHVSSLRL*EI*YDILCHFLSFSIWIDRELSQG 536
Score = 77.6 bits (163), Expect(3) = 8e-041
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = -2 / -1
Query: 910 PHLSSLSIHMEKLRKWQRIS**ISQTRRELTWLS*F*G 797
P LSSLSIHMEKLRKWQRIS *ISQ+RRELTWLS*F*G
Sbjct: 535 PWLSSLSIHMEKLRKWQRISY*ISQSRRELTWLS*F*G 422
Score = 76.7 bits (161), Expect(3) = 2e-036
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = -1 / -3
Query: 902 *FPINPYGKAKKMAEDIIIDFSNSKGVDMAVMILR 798
*FPINPYGKAKKMAEDII+DFS SKG DMAVMILR
Sbjct: 527 *FPINPYGKAKKMAEDIILDFSKSKGADMAVMILR 423
Score = 73.5 bits (154), Expect(3) = 3e-031
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +1 / +1
Query: 799 LKIMTAMSTPFEFEKSIMISSAIFLAFPYGLIGN* 903
LKIMTAMS PF+FEKS MISSAIFLAFPYGLIGN*
Sbjct: 424 LKIMTAMSAPFDFEKSNMISSAIFLAFPYGLIGN* 528
Score = 72.1 bits (151), Expect(3) = 3e-031
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +2 / +1
Query: 671 HQSKPQISDHALEVLA*EPHLIFPQGQIQ*H*NIYATEEKV 793
H+S PQISDHAL VLA*EPHLIFPQGQ Q*H*NI+ + V
Sbjct: 226 HRSMPQISDHALGVLA*EPHLIFPQGQSQ*H*NIWCRSQDV 348
Score = 40.0 bits (81), Expect(3) = 1e-045
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3 / +1
Query: 600 YAGSISCGIICSFNL 644
YAGSISCGIICSFNL
Sbjct: 1 YAGSISCGIICSFNL 45
Score = 39.1 bits (79), Expect(3) = 2e-049
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1 / -2
Query: 641 VKGTDYPTADGTCI 600
VKGTDYPTADGTCI
Sbjct: 42 VKGTDYPTADGTCI 1
Score = 37.3 bits (75), Expect(3) = 8e-041
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -3 / -1
Query: 657 HSRIKG*RNRLSHS*WNLH 601
H G*RNRLSHS*WNLH
Sbjct: 58 HDLSVG*RNRLSHS*WNLH 2
Score = 34.5 bits (69), Expect(3) = 2e-036
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2 / -3
Query: 643 RLKEQIIPQLMEPA 602
RLKEQIIPQLMEPA
Sbjct: 44 RLKEQIIPQLMEPA 3
Score = 33.6 bits (67), Expect(3) = 3e-031
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1 / +2
Query: 601 MQVPSAVG*SVPLTF 645
MQVPSAVG*SVPLT+
Sbjct: 2 MQVPSAVG*SVPLTY 46
>gb|CW269978.1|CW269978 104_741_11402142_148_35329_025 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402142, DNA
sequence
Length = 599
Score = 148 bits (318), Expect(2) = 6e-049
Identities = 56/73 (76%), Positives = 64/73 (87%)
Frame = -1 / +2
Query: 497 GRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHYTDLKESLSV 318
GRSVNEFV AC KATG +IK+EYL RRPGDYAEVYSDP+KI K+LNWTA YTDL +SL+
Sbjct: 221 GRSVNEFVKACMKATGASIKVEYLARRPGDYAEVYSDPSKIYKDLNWTAQYTDLGQSLAQ 400
Query: 317 AWRWQKSHPRGYG 279
AW+WQK+HP GYG
Sbjct: 401 AWKWQKAHPNGYG 439
Score = 102 bits (217), Expect(2) = 3e-029
Identities = 50/73 (68%), Positives = 52/73 (71%)
Frame = +1 / -3
Query: 280 P*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVA 459
P P GC FCH HA RL RSV AVQL SL IF GSLYTSA*SPGL RYS LM PVA
Sbjct: 438 PYPFGCAFCHFHAWARLWPRSVYWAVQLRSL*IFDGSLYTSA*SPGLRARYSTLMEAPVA 259
Query: 460 FLQASTNSLTERP 498
F+QA TNS T+ P
Sbjct: 258 FMQAFTNSFTDLP 220
Score = 70.3 bits (147), Expect(2) = 6e-049
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = -1 / +3
Query: 590 IDVTDLVDAHVKALNKAEPRKVGIYNVGTGRG 495
IDVTDLVDAHVKAL KAEP KVGIYNVGTG+G
Sbjct: 3 IDVTDLVDAHVKALGKAEPGKVGIYNVGTGQG 98
Score = 48.3 bits (99), Expect(2) = 3e-029
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1 / -2
Query: 490 ERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI 591
++P PVPTL*+PT GSAL A T AST+SVTS+
Sbjct: 103 QQPCPVPTL*IPTLPGSALPRALTWASTRSVTSM 2
>gb|CW400688.1|CW400688 fsbb001f091c02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f091c02, DNA
sequence
Length = 446
Score = 108 bits (230), Expect(2) = 8e-049
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = -1 / +3
Query: 497 GRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTA 351
GRSV EFVDACKKATGV+IK++Y RRPGDYAEVYSDP KINKELNWTA
Sbjct: 297 GRSVKEFVDACKKATGVDIKVDYFPRRPGDYAEVYSDPAKINKELNWTA 443
Score = 107 bits (229), Expect(2) = 8e-049
Identities = 43/56 (76%), Positives = 49/56 (87%)
Frame = -1 / +3
Query: 647 LKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNE 480
L+VKGTDY T DGTC+RDYIDVTDLVDAHVKALNKA+ +VGIYNVGTG+G +E
Sbjct: 24 LQVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAQRGRVGIYNVGTGKGHVSSE 191
Score = 78.0 bits (164), Expect(2) = 3e-029
Identities = 37/49 (75%), Positives = 39/49 (79%)
Frame = +1 / -2
Query: 352 AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVAFLQASTNSLTERP 498
AVQ SSL I GSLYTSA*SPGL + S LM TPVAFLQASTNS T+RP
Sbjct: 442 AVQFSSLLILAGSLYTSA*SPGLRGK*STLMSTPVAFLQASTNSFTDRP 296
Score = 72.5 bits (152), Expect(2) = 3e-029
Identities = 36/49 (73%), Positives = 39/49 (79%)
Frame = +1 / -2
Query: 496 PLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLT 642
P PVPTL +PT ALLSAFT AST+SVTS+*SL QVPS V *SVPLT
Sbjct: 175 PFPVPTLYIPTLPLCALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLT 29
Score = 62.5 bits (130), Expect(2) = 3e-021
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = -3 / +2
Query: 498 RSLS**VC*CLQEGNWGQHQN*VPQQKARRLCRSIQRPNKDKQGAQLDSS 349
RS+S V *CLQEGNW +HQ *+ + RRL IQRP +D+QGA+LD +
Sbjct: 296 RSVSEGVR*CLQEGNWSRHQG*LLPSQTRRLRGGIQRPCQDQQGAELDGA 445
Score = 61.1 bits (127), Expect(2) = 3e-021
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = -3 / +2
Query: 642 G*RNRLSHS*WNLHKRLY*CHRFS*CSCESTQQGRA*KSRHLQCWNRKRS 493
G*R RL ++* +L KRL+*CHR *C CE QQG +S ++QCW+ KRS
Sbjct: 29 G*RYRL*NT*RHLCKRLH*CHRPC*CPCEGAQQGTKRQSWYIQCWHWKRS 178
>gb|CW300247.1|CW300247 104_783_11463552_116_36252_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11463552, DNA
sequence
Length = 501
Score = 129 bits (277), Expect(5) = 1e-046
Identities = 50/55 (90%), Positives = 52/55 (94%)
Frame = -1 / -2
Query: 425 NRRPGDYAEVYSDPTKINKELNWTAHYTDLKESLSVAWRWQKSHPRGYGPN*I*P 261
+RRPGDYAEVYSDPT INKELNWTA Y+DLKESLSVAWRWQKSHP GYGPN*I*P
Sbjct: 500 SRRPGDYAEVYSDPTTINKELNWTAQYSDLKESLSVAWRWQKSHPHGYGPN*I*P 336
Score = 123 bits (264), Expect(4) = 4e-041
Identities = 48/54 (88%), Positives = 50/54 (92%)
Frame = +3 / +3
Query: 261 RLYLVWPVATRMRLLPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPS 422
RLYLVWPVA RMRLLPPPCD* ALFEIGI+SCPVELLV CW+AVYFCIISWPS
Sbjct: 336 RLYLVWPVAVRMRLLPPPCD*QALFEIGILSCPVELLVDRCWIAVYFCIISWPS 497
Score = 110 bits (235), Expect(4) = 7e-036
Identities = 48/55 (87%), Positives = 52/55 (94%)
Frame = -3 / -1
Query: 426 QQKARRLCRSIQRPNKDKQGAQLDSSLYRSQREPISRMEVAKVASAWLRAKLNIA 262
QQKARRLCRSIQR N D+QGAQLDSS++RSQREP+SRMEVAKVASA LRAKLNIA
Sbjct: 501 QQKARRLCRSIQRSNNDQQGAQLDSSIFRSQREPVSRMEVAKVASARLRAKLNIA 337
Score = 110 bits (234), Expect(4) = 1e-035
Identities = 50/55 (90%), Positives = 50/55 (90%)
Frame = +1 / +1
Query: 262 GYI*FGP*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLL 426
GYI*FGP*P GCDFCHLHATDRLSLRS *AVQLSSL I VGSLYTSA*SPGLLL
Sbjct: 337 GYI*FGP*PCGCDFCHLHATDRLSLRSEY*AVQLSSLLIVVGSLYTSA*SPGLLL 501
Score = 104 bits (221), Expect(3) = 8e-031
Identities = 48/55 (87%), Positives = 49/55 (89%)
Frame = +2 / +2
Query: 260 QAIFSLARSHADATFATSMRLIGSL*DRYNELSS*APCLSLLGRCILLHNLLAFC 424
+AIFSLARS ADATFATSMRL GSL*DR ELSS*APC SLL RCILLHNLLAFC
Sbjct: 335 EAIFSLARSRADATFATSMRLTGSL*DRNIELSS*APC*SLLDRCILLHNLLAFC 499
Score = 93.2 bits (197), Expect(4) = 1e-027
Identities = 42/54 (77%), Positives = 42/54 (77%)
Frame = -2 / -3
Query: 421 EGQEIMQKYTAXXXXXXXXXTGQLIIPISKRAYQSHGGGKSRIRVATGQTKYSL 260
EGQEIMQKYTA TGQL IPISKRA QSHGGGKSRIR ATGQTKYSL
Sbjct: 496 EGQEIMQKYTAIQQRSTRSSTGQLNIPISKRACQSHGGGKSRIRTATGQTKYSL 335
Score = 46.9 bits (96), Expect(5) = 1e-046
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = -3 / -2
Query: 246 HLIVNTY*FFS*RYKILLRYSSKS 175
H IVNTY*FFS*RYKIL+RYS K+
Sbjct: 335 H*IVNTY*FFS*RYKILVRYSQKN 264
Score = 39.1 bits (79), Expect(4) = 4e-041
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +1 / +3
Query: 187 VSQQDLVSLTKELICIDD 240
V+ QDL+SLTKELICIDD
Sbjct: 276 VAHQDLISLTKELICIDD 329
Score = 38.6 bits (78), Expect(3) = 8e-031
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +2 / +1
Query: 56 NNEIVITGPFFHPNHHSCFC*PK 124
N +V FF+PNH SCFC*PK
Sbjct: 148 NEIVVTGPLFFYPNHRSCFC*PK 216
Score = 36.3 bits (73), Expect(4) = 7e-036
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -2 / -1
Query: 247 SLNRQYILVL*LEIQDLAAILLK 179
SLNRQYIL+L*L I DL A+L K
Sbjct: 336 SLNRQYILIL*LAI*DLGALLSK 268
Score = 35.0 bits (70), Expect(4) = 1e-035
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +2 / +1
Query: 179 FEEYRSKILYL*LKN*YVLTIK* 247
F E R+KILY *LKN*YVLTI+*
Sbjct: 268 F*E*RTKILYR*LKN*YVLTIQ* 336
Score = 33.1 bits (66), Expect(4) = 7e-036
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -3 / -2
Query: 165 ILLSLVLFISKVCIFG*QKHEW*FG*KK 82
+ SL + + FG*QKHE *FG*KK
Sbjct: 257 LFFSLSFYFKGLLFFG*QKHER*FG*KK 174
Score = 32.7 bits (65), Expect(4) = 1e-035
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1 / +3
Query: 70 HHRSFFSSKSPFMFLLAKNANF*NKKDERKK 162
H F SKSPFMFLLAK K +R++
Sbjct: 162 HRSPFLLSKSPFMFLLAKKQQTFEIKRKREE 254
Score = 32.2 bits (64), Expect(4) = 1e-027
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2 / -1
Query: 124 FWLAET*MVIWMKKRTCDDN 65
FWLAET* VIW+K++ D+
Sbjct: 216 FWLAET*TVIWIKEKGTCDD 157
Score = 32.2 bits (64), Expect(4) = 4e-041
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2 / +1
Query: 50 VRNNEIVITGPFFHPNHH 103
VRNNEIV+TGP F +H
Sbjct: 139 VRNNEIVVTGPLFFYPNH 192
Score = 30.9 bits (61), Expect(3) = 8e-031
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3 / +2
Query: 186 SIAARSCISN*RTNMY*RLSE 248
S A RS I+N*R NMY*R SE
Sbjct: 275 SSAPRSYIAN*RINMY*RFSE 337
Score = 30.9 bits (61), Expect(4) = 4e-041
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3 / +2
Query: 87 FIQITIHVSASQK 125
FIQIT+HVSASQK
Sbjct: 179 FIQITVHVSASQK 217
Score = 30.9 bits (61), Expect(4) = 1e-027
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1 / -3
Query: 245 T*SSIHISSLVRDTRSCCDT 186
T SSIHI+SLV D RS C T
Sbjct: 334 TESSIHINSLVSDIRSWCAT 275
Score = 30.4 bits (60), Expect(5) = 1e-046
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / -1
Query: 88 KKRTCDDNFIVSD 50
+K TCDDNFIVSD
Sbjct: 177 EKGTCDDNFIVSD 139
Score = 30.4 bits (60), Expect(5) = 1e-046
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -1 / -3
Query: 119 ASRNMNGDLDEKK 81
ASRNMNGDLD++K
Sbjct: 211 ASRNMNGDLDKRK 173
Score = 29.9 bits (59), Expect(4) = 1e-035
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 49 CQKQ*NCHHRSFF 87
CQKQ*NC HRS F
Sbjct: 138 CQKQ*NCRHRSPF 176
Score = 28.1 bits (55), Expect(4) = 7e-036
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3 / -2
Query: 87 KKGPVMTISLFLT 49
K+GPV TISLFLT
Sbjct: 176 KRGPVTTISLFLT 138
Score = 24.9 bits (48), Expect(5) = 1e-046
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 156 SLVLFISKVCIF 121
SL LFISKVC F
Sbjct: 250 SLFLFISKVCCF 215
Score = 23.5 bits (45), Expect(4) = 1e-027
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -3
Query: 86 KKDL**QFHCF* 51
K DL* QFHCF*
Sbjct: 175 KGDL*RQFHCF* 140
>gb|CD228332.1|CD228332 CCC1_7_D11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_7_D11_A007 3', mRNA sequence
Length = 641
Score = 182 bits (391), Expect = 1e-044
Identities = 70/89 (78%), Positives = 79/89 (88%)
Frame = -1 / +2
Query: 545 KAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKE 366
KAEP KVGIYNVGTG+GRSVNEFV AC KATG +IK+EYL RRPGDYAEVYSDP+KI K+
Sbjct: 5 KAEPGKVGIYNVGTGQGRSVNEFVKACMKATGASIKVEYLARRPGDYAEVYSDPSKIYKD 184
Query: 365 LNWTAHYTDLKESLSVAWRWQKSHPRGYG 279
LNWTA YTDL +SL+ AW+WQK+HP GYG
Sbjct: 185 LNWTAQYTDLGQSLAQAWKWQKAHPNGYG 271
Score = 127 bits (272), Expect = 3e-028
Identities = 62/89 (69%), Positives = 65/89 (73%)
Frame = +1 / -3
Query: 280 P*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVA 459
P P GC FCH HA RL RSV AVQL SL IF GSLYTSA*SPGL RYS LM PVA
Sbjct: 270 PYPFGCAFCHFHAWARLWPRSVYWAVQLRSL*IFDGSLYTSA*SPGLRARYSTLMEAPVA 91
Query: 460 FLQASTNSLTERPLPVPTL*MPTFLGSAL 546
F+QA TNS T+ P PVPTL*+PT GSAL
Sbjct: 90 FMQAFTNSFTDLPCPVPTL*IPTLPGSAL 4
>gb|BG159292.1|BG159292 OV2_5_H06.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 584
Score = 179 bits (386), Expect = 5e-044
Identities = 69/88 (78%), Positives = 78/88 (88%)
Frame = -1 / +1
Query: 542 AEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKEL 363
AEP KVGIYNVGTG+GRSVNEFV AC KATG +IK+EYL RRPGDYAEVYSDP+KI K+L
Sbjct: 1 AEPGKVGIYNVGTGQGRSVNEFVKACMKATGASIKVEYLARRPGDYAEVYSDPSKIYKDL 180
Query: 362 NWTAHYTDLKESLSVAWRWQKSHPRGYG 279
NWTA YTDL +SL+ AW+WQK+HP GYG
Sbjct: 181 NWTAQYTDLGQSLAQAWKWQKAHPNGYG 264
Score = 123 bits (264), Expect = 3e-027
Identities = 60/87 (68%), Positives = 63/87 (72%)
Frame = +1 / -1
Query: 280 P*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVA 459
P P GC FCH HA RL RSV AVQL SL IF GSLYTSA*SPGL RYS LM PVA
Sbjct: 263 PYPFGCAFCHFHAWARLWPRSVYWAVQLRSL*IFDGSLYTSA*SPGLRARYSTLMEAPVA 84
Query: 460 FLQASTNSLTERPLPVPTL*MPTFLGS 540
F+QA TNS T+ P PVPTL*+PT GS
Sbjct: 83 FMQAFTNSFTDLPCPVPTL*IPTLPGS 3
>gb|BG159555.1|BG159555 OV2_5_H06.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 484
Score = 179 bits (386), Expect = 5e-044
Identities = 69/88 (78%), Positives = 78/88 (88%)
Frame = -1 / +1
Query: 542 AEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKEL 363
AEP KVGIYNVGTG+GRSVNEFV AC KATG +IK+EYL RRPGDYAEVYSDP+KI K+L
Sbjct: 1 AEPGKVGIYNVGTGQGRSVNEFVKACMKATGASIKVEYLARRPGDYAEVYSDPSKIYKDL 180
Query: 362 NWTAHYTDLKESLSVAWRWQKSHPRGYG 279
NWTA YTDL +SL+ AW+WQK+HP GYG
Sbjct: 181 NWTAQYTDLGQSLAQAWKWQKAHPNGYG 264
Score = 123 bits (264), Expect = 3e-027
Identities = 60/87 (68%), Positives = 63/87 (72%)
Frame = +1 / -3
Query: 280 P*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVA 459
P P GC FCH HA RL RSV AVQL SL IF GSLYTSA*SPGL RYS LM PVA
Sbjct: 263 PYPFGCAFCHFHAWARLWPRSVYWAVQLRSL*IFDGSLYTSA*SPGLRARYSTLMEAPVA 84
Query: 460 FLQASTNSLTERPLPVPTL*MPTFLGS 540
F+QA TNS T+ P PVPTL*+PT GS
Sbjct: 83 FMQAFTNSFTDLPCPVPTL*IPTLPGS 3
>gb|CN147765.1|CN147765 WOUND1_52_A01.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_52_A01_A002 3', mRNA sequence
Length = 625
Score = 171 bits (369), Expect = 1e-041
Identities = 66/86 (76%), Positives = 73/86 (84%)
Frame = -1 / +1
Query: 536 PRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNW 357
P KVGIYNVGTG+GRSVNEFV AC KATG +IK+EYL RRPGDY EVYSDP KI K+LNW
Sbjct: 1 PGKVGIYNVGTGQGRSVNEFVKACMKATGASIKVEYLARRPGDYVEVYSDPWKIYKDLNW 180
Query: 356 TAHYTDLKESLSVAWRWQKSHPRGYG 279
TA YTD +SLS AW+WQK+HP GYG
Sbjct: 181 TAQYTDFGQSLSQAWKWQKAHPNGYG 258
Score = 117 bits (251), Expect = 2e-025
Identities = 55/83 (66%), Positives = 60/83 (72%)
Frame = +1 / -3
Query: 280 P*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVA 459
P P GC FCH HA +RL +SV AVQ SL IF GSLYTS *SPGL RYS LM PVA
Sbjct: 257 PYPFGCAFCHFHAWERLWPKSVYWAVQFKSL*IFHGSLYTST*SPGLRARYSTLMEAPVA 78
Query: 460 FLQASTNSLTERPLPVPTL*MPT 528
F+QA TNS T+ P PVPTL*+PT
Sbjct: 77 FMQAFTNSFTDLPCPVPTL*IPT 9
>gb|BG356594.1|BG356594 EM1_24_E01.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 463
Score = 168 bits (361), Expect = 1e-040
Identities = 66/85 (77%), Positives = 72/85 (84%)
Frame = -1 / +2
Query: 530 KVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTA 351
+VGIYNVGTG+GRSV EFVDACKKATGV+IK++Y RR GDYAEVYSDP KINKELNWTA
Sbjct: 8 RVGIYNVGTGKGRSVKEFVDACKKATGVDIKVDYFPRRAGDYAEVYSDPAKINKELNWTA 187
Query: 350 HYTDLKESLSVAWRWQKSHPRGYGP 276
TDL ESL VAW WQK+H GY P
Sbjct: 188 QRTDLHESLRVAWTWQKAHRSGYEP 262
Score = 122 bits (261), Expect = 9e-027
Identities = 59/84 (70%), Positives = 63/84 (75%)
Frame = +1 / -2
Query: 277 GP*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPV 456
G *P C FCH+HAT RLS RSV AVQ SSL I GSLYTSA*SP L + S LM TPV
Sbjct: 261 GS*PLLCAFCHVHATLRLSWRSVRCAVQFSSLLILAGSLYTSA*SPALRGK*STLMSTPV 82
Query: 457 AFLQASTNSLTERPLPVPTL*MPT 528
AFLQASTNS T+RP PVPTL +PT
Sbjct: 81 AFLQASTNSFTDRPFPVPTLYIPT 10
>gb|BG463311.1|BG463311 EM1_48_A03.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 622
Score = 161 bits (346), Expect = 2e-038
Identities = 61/79 (77%), Positives = 70/79 (88%)
Frame = -1 / +1
Query: 515 NVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHYTDL 336
NVGTG+GRSVNEFV AC KATG +IK+EYL RRPGDYAEVYSDP+KI K+LNWTA YTDL
Sbjct: 1 NVGTGQGRSVNEFVKACMKATGASIKVEYLARRPGDYAEVYSDPSKIYKDLNWTAQYTDL 180
Query: 335 KESLSVAWRWQKSHPRGYG 279
+SL+ AW+WQK+HP GYG
Sbjct: 181 GQSLAQAWKWQKAHPNGYG 237
Score = 112 bits (239), Expect = 1e-023
Identities = 54/78 (69%), Positives = 56/78 (71%)
Frame = +1 / -3
Query: 280 P*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVA 459
P P GC FCH HA RL RSV AVQL SL IF GSLYTSA*SPGL RYS LM PVA
Sbjct: 236 PYPFGCAFCHFHAWARLWPRSVYWAVQLRSL*IFDGSLYTSA*SPGLRARYSTLMEAPVA 57
Query: 460 FLQASTNSLTERPLPVPT 513
F+QA TNS T+ P PVPT
Sbjct: 56 FMQAFTNSFTDLPCPVPT 3
>gb|CN135205.1|CN135205 OX1_31_F02.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_31_F02_A002 3', mRNA sequence
Length = 683
Score = 154 bits (330), Expect = 3e-036
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = -1 / +3
Query: 506 TGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHYTDLKES 327
TG+GRSVNEFV AC KATG +IK+EYL RRPGDYAEVYSDP+KI K+LNWTA YTDL +S
Sbjct: 3 TGQGRSVNEFVKACMKATGASIKVEYLARRPGDYAEVYSDPSKIYKDLNWTAQYTDLGQS 182
Query: 326 LSVAWRWQKSHPRGYG 279
L+ AW+WQK+HP GYG
Sbjct: 183 LAQAWKWQKAHPNGYG 230
Score = 106 bits (227), Expect = 4e-022
Identities = 52/76 (68%), Positives = 54/76 (71%)
Frame = +1 / -2
Query: 280 P*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVA 459
P P GC FCH HA RL RSV AVQL SL IF GSLYTSA*SPGL RYS LM PVA
Sbjct: 229 PYPFGCAFCHFHAWARLWPRSVYWAVQLRSL*IFDGSLYTSA*SPGLRARYSTLMEAPVA 50
Query: 460 FLQASTNSLTERPLPV 507
F+QA TNS T+ P PV
Sbjct: 49 FMQAFTNSFTDLPCPV 2
>gb|AW287265.2|AW287265 LG1_268_G06.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 501
Score = 143 bits (307), Expect = 4e-033
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = -1 / +3
Query: 1016 TLLILEAMASHGVQTLIYSSTCATYGEPDKMPITEATP*FPINPYGKAKKMAEDIIIDFS 837
TL++LEAMA+H V+TLIYSSTCATYGEP+KMPITE TP FPINPYGKAKKMAEDII+DFS
Sbjct: 288 TLVVLEAMATHNVKTLIYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFS 467
Query: 836 NSKGVDMAVMI 804
SK DMAVMI
Sbjct: 468 KSKRSDMAVMI 500
Score = 105 bits (225), Expect = 8e-022
Identities = 52/66 (78%), Positives = 56/66 (84%)
Frame = +1 / -3
Query: 805 IMTAMSTPFEFEKSIMISSAIFLAFPYGLIGN*GVASVIGILSGSP*VAHVLE*IRVWTP 984
IMTAMS F+FEKS MISSAIFLA PYGLIGN GV SV+GI SGSP*VAHVLE*+RV+T
Sbjct: 499 IMTAMSDLFDFEKSKMISSAIFLALPYGLIGNWGVPSVMGIFSGSP*VAHVLE*MRVFTL 320
Query: 985 *DAIAS 1002
AIAS
Sbjct: 319 CVAIAS 302
>gb|CW338169.1|CW338169 104_838_11484601_148_36127_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484601, DNA
sequence
Length = 604
Score = 142 bits (305), Expect = 8e-033
Identities = 55/73 (75%), Positives = 62/73 (84%)
Frame = -1 / -3
Query: 497 GRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHYTDLKESLSV 318
GRSVNEFV AC KATG +IK+EYL RRPGDYAEVYSDP+KI K L WTA YTDL +SL+
Sbjct: 539 GRSVNEFVKACMKATGASIKVEYLARRPGDYAEVYSDPSKIYKVLIWTAQYTDLGQSLAQ 360
Query: 317 AWRWQKSHPRGYG 279
AW+WQK+HP GYG
Sbjct: 359 AWKWQKAHPNGYG 321
>gb|CW300248.1|CW300248 104_783_11463552_148_36251_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11463552, DNA
sequence
Length = 624
Score = 123 bits (264), Expect(2) = 2e-032
Identities = 50/54 (92%), Positives = 50/54 (92%)
Frame = -3 / +3
Query: 657 HSRIKG*RNRLSHS*WNLHKRLY*CHRFS*CSCESTQQGRA*KSRHLQCWNRKR 496
H G*RNRLSHS*WNLHKRLY*CHRFS*CSCESTQQGRA*KSRHLQCWNRKR
Sbjct: 192 HDLSVG*RNRLSHS*WNLHKRLY*CHRFS*CSCESTQQGRA*KSRHLQCWNRKR 353
Score = 122 bits (262), Expect(2) = 4e-031
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = -1 / +1
Query: 641 VKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNE 480
VKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRG + +
Sbjct: 208 VKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGLTTRD 369
Score = 105 bits (225), Expect(2) = 2e-027
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +1 / -2
Query: 493 RPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLTF 645
+PLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLT+
Sbjct: 356 KPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLTY 204
Score = 94.5 bits (200), Expect(2) = 8e-021
Identities = 40/50 (80%), Positives = 40/50 (80%)
Frame = +3 / -1
Query: 495 TSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISCGIICSFNL 644
TSSCSNIVNADFSRLCLVECFHMS SYAGSISCGIICSFNL
Sbjct: 354 TSSCSNIVNADFSRLCLVECFHMSIN*ICDINIISYAGSISCGIICSFNL 205
Score = 40.9 bits (83), Expect(2) = 2e-027
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +1 / -3
Query: 640 TFNPGMTPNAASKQAPDI 693
TFNPGMTPNA K APDI
Sbjct: 55 TFNPGMTPNAGEKHAPDI 2
Score = 39.6 bits (80), Expect(2) = 2e-032
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1 / +3
Query: 692 ISGACFDAALGVIPGLKV 639
ISGACF ALGVIPGLKV
Sbjct: 3 ISGACFSPALGVIPGLKV 56
Score = 36.3 bits (73), Expect(2) = 4e-031
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3 / +2
Query: 693 DIWGLL*CSIRSHSRIKG 640
DIWG+L SIRSHSRI+G
Sbjct: 2 DIWGMLLSSIRSHSRIEG 55
Score = 29.9 bits (59), Expect(2) = 8e-021
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3 / -2
Query: 648 SWNDS*CCIKASPRY 692
SWNDS*C +A PRY
Sbjct: 47 SWNDS*CWREACPRY 3
>gb|CW250502.1|CW250502 104_712_11223425_148_35054_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223425, DNA
sequence
Length = 644
Score = 74.8 bits (157), Expect(5) = 1e-030
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = -1 / +1
Query: 353 AHYTDLKESLSVAWRWQKSHPRGYGPN*I*P 261
A YTDLKESLSVAWRWQKSHP GYGPN*I*P
Sbjct: 1 AQYTDLKESLSVAWRWQKSHPHGYGPN*I*P 93
Score = 69.3 bits (145), Expect(4) = 3e-025
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = +3 / -3
Query: 261 RLYLVWPVATRMRLLPPPCD**ALFEIGIMS 353
RLYLVWPVA RMRLLPPPCD* ALFEIGI+S
Sbjct: 93 RLYLVWPVAVRMRLLPPPCD*QALFEIGILS 1
Score = 68.4 bits (143), Expect(4) = 1e-023
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +1 / -1
Query: 262 GYI*FGP*PRGCDFCHLHATDRLSLRSV 345
GYI*FGP*P GCDFCHLHATDRLSLRSV
Sbjct: 92 GYI*FGP*PCGCDFCHLHATDRLSLRSV 9
Score = 64.8 bits (135), Expect(4) = 2e-022
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -2 / +2
Query: 352 LIIPISKRAYQSHGGGKSRIRVATGQTKYSL 260
L IPISKRA QSHGGGKSRIR ATGQTKYSL
Sbjct: 2 LNIPISKRACQSHGGGKSRIRTATGQTKYSL 94
Score = 46.9 bits (96), Expect(5) = 1e-030
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = -3 / +1
Query: 246 HLIVNTY*FFS*RYKILLRYSSKS 175
H IVNTY*FFS*RYKIL+RYS K+
Sbjct: 94 H*IVNTY*FFS*RYKILVRYSQKN 165
Score = 39.1 bits (79), Expect(4) = 3e-025
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +1 / -3
Query: 187 VSQQDLVSLTKELICIDD 240
V+ QDL+SLTKELICIDD
Sbjct: 153 VAHQDLISLTKELICIDD 100
Score = 36.3 bits (73), Expect(4) = 2e-022
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -2 / +3
Query: 247 SLNRQYILVL*LEIQDLAAILLK 179
SLNRQYIL+L*L I DL A+L K
Sbjct: 93 SLNRQYILIL*LAI*DLGALLSK 161
Score = 35.0 bits (70), Expect(4) = 1e-023
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +2 / -1
Query: 179 FEEYRSKILYL*LKN*YVLTIK* 247
F E R+KILY *LKN*YVLTI+*
Sbjct: 161 F*E*RTKILYR*LKN*YVLTIQ* 93
Score = 33.1 bits (66), Expect(4) = 2e-022
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -3 / +1
Query: 165 ILLSLVLFISKVCIFG*QKHEW*FG*KK 82
+ SL + + FG*QKHE *FG*KK
Sbjct: 172 LFFSLSFYFKGLLFFG*QKHER*FG*KK 255
Score = 32.7 bits (65), Expect(4) = 1e-023
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1 / -3
Query: 70 HHRSFFSSKSPFMFLLAKNANF*NKKDERKK 162
H F SKSPFMFLLAK K +R++
Sbjct: 267 HRSPFLLSKSPFMFLLAKKQQTFEIKRKREE 175
Score = 32.2 bits (64), Expect(4) = 3e-025
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2 / -1
Query: 50 VRNNEIVITGPFFHPNHH 103
VRNNEIV+TGP F +H
Sbjct: 290 VRNNEIVVTGPLFFYPNH 237
Score = 30.9 bits (61), Expect(4) = 3e-025
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3 / -2
Query: 87 FIQITIHVSASQK 125
FIQIT+HVSASQK
Sbjct: 250 FIQITVHVSASQK 212
Score = 30.4 bits (60), Expect(5) = 1e-030
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / +3
Query: 88 KKRTCDDNFIVSD 50
+K TCDDNFIVSD
Sbjct: 252 EKGTCDDNFIVSD 290
Score = 30.4 bits (60), Expect(5) = 1e-030
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -1 / +2
Query: 119 ASRNMNGDLDEKK 81
ASRNMNGDLD++K
Sbjct: 218 ASRNMNGDLDKRK 256
Score = 29.9 bits (59), Expect(4) = 1e-023
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1 / -3
Query: 49 CQKQ*NCHHRSFF 87
CQKQ*NC HRS F
Sbjct: 291 CQKQ*NCRHRSPF 253
Score = 28.1 bits (55), Expect(4) = 2e-022
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3 / +1
Query: 87 KKGPVMTISLFLT 49
K+GPV TISLFLT
Sbjct: 253 KRGPVTTISLFLT 291
Score = 24.9 bits (48), Expect(5) = 1e-030
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +2
Query: 156 SLVLFISKVCIF 121
SL LFISKVC F
Sbjct: 179 SLFLFISKVCCF 214
>gb|CL172474.1|CL172474 104_375_10890187_148_31796_091 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890187, DNA
sequence
Length = 706
Score = 105 bits (223), Expect(2) = 3e-030
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = -1 / +1
Query: 773 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKV 639
RYFNVIGSDPEGRLGEAPRPELRE GRISGACFDAA G+IPGLKV
Sbjct: 382 RYFNVIGSDPEGRLGEAPRPELREQGRISGACFDAARGIIPGLKV 516
Score = 100 bits (213), Expect(2) = 2e-025
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = +1 / -3
Query: 640 TFNPGMTPNAASKQAPDIRPCSRSSGLGASPNLPSGSDPITLKYL 774
TF PG+ P AASKQAPDIRPCSR+SGLGASPNLPSGSDPITLKYL
Sbjct: 515 TFKPGIIPRAASKQAPDIRPCSRNSGLGASPNLPSGSDPITLKYL 381
Score = 51.5 bits (106), Expect(2) = 3e-030
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -1 / +1
Query: 896 PINPYGKAKKMAEDIIIDFSNSKGVDMAVM 807
PINPYGKAKKMAEDII+DFS + + + ++
Sbjct: 124 PINPYGKAKKMAEDIILDFSKNSDMAVMIL 213
Score = 40.0 bits (81), Expect(2) = 2e-025
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +1 / -3
Query: 838 EKSIMISSAIFLAFPYGLIGN* 903
EKS +ISSAIFLA PYGLIG *
Sbjct: 182 EKSRIISSAIFLALPYGLIGT* 117
>gb|CW109338.1|CW109338 104_481_11098049_116_34505_071 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11098049, DNA
sequence
Length = 622
Score = 80.8 bits (170), Expect(2) = 4e-030
Identities = 31/38 (81%), Positives = 36/38 (94%)
Frame = -1 / -1
Query: 1016 TLLILEAMASHGVQTLIYSSTCATYGEPDKMPITEATP 903
TL++LEAMA+H V+TLIYSSTCATYGEP+KMPITE TP
Sbjct: 412 TLVVLEAMATHNVKTLIYSSTCATYGEPEKMPITEGTP 299
Score = 74.8 bits (157), Expect(2) = 4e-030
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = -1 / -1
Query: 899 FPINPYGKAKKMAEDIIIDFSNSKGVDMAVMILRLEPFLQLHRY 768
FPINPYGKAKKMAEDII+DFS SK DMAVMILRL+ + +Y
Sbjct: 154 FPINPYGKAKKMAEDIILDFSKSKRSDMAVMILRLDYSPRYQKY 23
>gb|CW352664.1|CW352664 fsbb001f015a20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f015a20, DNA
sequence
Length = 785
Score = 80.8 bits (170), Expect(2) = 1e-028
Identities = 31/38 (81%), Positives = 36/38 (94%)
Frame = -1 / +1
Query: 1016 TLLILEAMASHGVQTLIYSSTCATYGEPDKMPITEATP 903
TL++LEAMA+H V+TLIYSSTCATYGEP+KMPITE TP
Sbjct: 349 TLVVLEAMATHNVKTLIYSSTCATYGEPEKMPITEGTP 462
Score = 70.3 bits (147), Expect(2) = 1e-028
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -1 / +1
Query: 899 FPINPYGKAKKMAEDIIIDFSNSKGVDMAVMILR 798
FPINPYGKAKKMAEDII+DFS SK DMAVMIL+
Sbjct: 607 FPINPYGKAKKMAEDIILDFSKSKRSDMAVMILK 708
>gb|CW087840.1|CW087840 104_432_10947865_116_32556_005 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10947865, DNA
sequence
Length = 675
Score = 89.5 bits (189), Expect(2) = 3e-026
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = +3 / -2
Query: 900 LRCGFCNRHLIWFSVGSTCTGVNKGLDSMRCHSLQNQ* 1013
LRCGFCNRHL+WFS+GSTCT V++G DSMRCHSLQNQ*
Sbjct: 386 LRCGFCNRHLLWFSIGSTCTRVDEGFDSMRCHSLQNQ* 273
Score = 88.6 bits (187), Expect(2) = 6e-027
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = -1 / +3
Query: 1016 TLLILEAMASHGVQTLIYSSTCATYGEPDKMPITEATP 903
TLLILEAMASHGV+TLIYSSTCATYGEP+KMPITEATP
Sbjct: 270 TLLILEAMASHGVKTLIYSSTCATYGEPEKMPITEATP 383
Score = 81.3 bits (171), Expect(2) = 1e-023
Identities = 32/37 (86%), Positives = 32/37 (86%)
Frame = -2 / +1
Query: 1012 Y*FWRLWHLMESKPLFTPVHVLPTENQIRCLLQKPHL 902
Y*FWRLWHLMESKP T VHVLP ENQ RCLLQKPHL
Sbjct: 274 Y*FWRLWHLMESKPSSTLVHVLPMENQRRCLLQKPHL 384
Score = 78.0 bits (164), Expect(2) = 3e-022
Identities = 30/35 (85%), Positives = 31/35 (88%)
Frame = -3 / +2
Query: 1008 DFGGYGISWSPNPYLLQYMCYLRRTR*DAYYRSHT 904
DFGGYGISWS NP+LL YMCYL RTR DAYYRSHT
Sbjct: 278 DFGGYGISWSQNPHLL*YMCYLWRTREDAYYRSHT 382
Score = 56.5 bits (117), Expect(2) = 6e-027
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = -3 / +1
Query: 903 LVPYQSIWKS*ENGRGYHNRFLKL 832
LVPYQSIWKS*ENGRGYH RFLK+
Sbjct: 604 LVPYQSIWKS*ENGRGYHIRFLKV 675
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +3 / -3
Query: 834 V*EIYYDILCHFLSFSIWIDRELRCG 911
+*EI YDILCHFLSFSIWIDREL G
Sbjct: 673 L*EI*YDILCHFLSFSIWIDRELSQG 596
Score = 52.8 bits (109), Expect(2) = 1e-023
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -1 / +2
Query: 902 *FPINPYGKAKKMAEDIIIDFS 837
*FPINPYGKAKKMAEDII+DFS
Sbjct: 605 *FPINPYGKAKKMAEDIILDFS 670
Score = 51.5 bits (106), Expect(2) = 3e-022
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = -2 / +3
Query: 910 PHLSSLSIHMEKLRKWQRIS**ISQT 833
P LSSLSIHMEKLRKWQRIS *ISQ+
Sbjct: 597 PWLSSLSIHMEKLRKWQRISY*ISQS 674
>gb|AW284262.1|AW284262 LG1_268_G06.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 439
Score = 119 bits (254), Expect = 8e-026
Identities = 46/61 (75%), Positives = 50/61 (81%)
Frame = -1 / +3
Query: 458 ATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHYTDLKESLSVAWRWQKSHPRGYG 279
ATGV+IK++Y RRPGDYAEVYSDP KINKELNWTA TDL ESL VAW WQK+H GY
Sbjct: 3 ATGVDIKVDYFPRRPGDYAEVYSDPAKINKELNWTAQRTDLHESLRVAWTWQKAHRSGYE 182
Query: 278 P 276
P
Sbjct: 183 P 185
>gb|CN147179.1|CN147179 WOUND1_48_D07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_48_D07_A002 3', mRNA sequence
Length = 743
Score = 68.0 bits (142), Expect(2) = 7e-023
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = -1 / +1
Query: 521 IYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHY 345
+YN+GTG+G SV E V A +K +G I + + RRPGD VY++ K K+L W A Y
Sbjct: 196 VYNLGTGKGTSVLEMVAAFEKVSGKKIPLVFAGRRPGDAEIVYAETAKAEKDLKWKAKY 372
Score = 61.1 bits (127), Expect(2) = 7e-023
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = -1 / +1
Query: 668 ALGVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNK 543
A+G +P L V GTDY T DGT +RDYI V DL D H+ AL K
Sbjct: 37 AVGRLPHLTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRK 162
>gb|CX615956.1|CX615956 GABR1_25_A05.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_25_A05_A002 3', mRNA sequence
Length = 719
Score = 66.1 bits (138), Expect(3) = 8e-022
Identities = 27/59 (45%), Positives = 36/59 (61%)
Frame = -1 / +3
Query: 521 IYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHY 345
+YN+GTG+G SV E V A +K +G I + + RRPGD VY+ K K+L W A Y
Sbjct: 159 VYNLGTGKGTSVLEMVAAFEKVSGKKIPLVFAGRRPGDAEIVYAATAKAEKDLKWKAKY 335
Score = 59.3 bits (123), Expect(3) = 8e-022
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = -1 / +3
Query: 665 LGVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNK 543
+G +P L V GTDY T DGT +RDYI V DL D H+ AL K
Sbjct: 3 VGRLPHLTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRK 125
Score = 21.7 bits (41), Expect(3) = 8e-022
Identities = 6/19 (31%), Positives = 9/19 (47%)
Frame = -1 / +3
Query: 338 LKESLSVAWRWQKSHPRGY 282
++E W W +P GY
Sbjct: 339 IEEMCRDLWNWASKNPYGY 395
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,108,916,044
Number of Sequences: 832831
Number of extensions: 14890004
Number of successful extensions: 65414
Number of sequences better than 1.0e-020: 35
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 33388580833
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)