TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3106097.2.2
(1005 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF177098.1|BF177098 EM1_3_F08.g1_A002 Embryo 1 (EM1) Sor... 270 1e-085
gb|BG103716.1|BG103716 RHIZ2_39_H10.g1_A003 Rhizome2 (RHIZ2... 308 8e-084
gb|BG410864.1|BG410864 EM1_26_H05.g1_A002 Embryo 1 (EM1) So... 302 7e-082
gb|BE597862.1|BE597862 PI1_66_C12.g1_A002 Pathogen induced ... 269 5e-072
gb|CN130960.1|CN130960 RHOH1_45_B03.b1_A002 Acid- and alkal... 215 9e-072
gb|BG241433.1|BG241433 RHIZ2_49_B06.g1_A003 Rhizome2 (RHIZ2... 156 2e-069
gb|BE364125.1|BE364125 PI1_11_D07.g1_A002 Pathogen induced ... 221 2e-068
gb|BF422038.1|BF422038 FM1_12_B10.g1_A003 Floral-Induced Me... 254 1e-067
gb|BM318323.1|BM318323 PI1_77_C05.g9_A002 Pathogen induced ... 233 2e-061
gb|BG488129.1|BG488129 RHIZ2_63_G11.g1_A003 Rhizome2 (RHIZ2... 125 5e-060
gb|CD212733.1|CD212733 HS1_16_B05.b1_A012 Heat-shocked seed... 207 2e-053
gb|BG050643.1|BG050643 FM1_70_H01.g1_A003 Floral-Induced Me... 209 5e-053
gb|CX614951.1|CX614951 GABR1_17_F12.b1_A002 GA- or brassino... 194 5e-051
gb|BG241327.1|BG241327 RHIZ2_49_A07.g1_A003 Rhizome2 (RHIZ2... 191 8e-049
gb|BG463033.1|BG463033 EM1_46_F12.g1_A002 Embryo 1 (EM1) So... 176 5e-043
gb|BI099230.1|BI099230 IP1_40_A12.g1_A002 Immature pannicle... 170 4e-041
gb|BG462976.1|BG462976 EM1_46_A04.g1_A002 Embryo 1 (EM1) So... 160 4e-038
gb|BI099139.1|BI099139 IP1_38_B12.g1_A002 Immature pannicle... 150 3e-035
gb|BG487867.1|BG487867 RHIZ2_60_D03.g1_A003 Rhizome2 (RHIZ2... 145 4e-035
gb|BM326900.1|BM326900 PIC1_4_E07.g1_A002 Pathogen-infected... 136 5e-031
gb|BZ627055.1|BZ627055 ih50a05.g1 WGS-SbicolorF (DH5a methy... 127 2e-028
gb|CW276652.1|CW276652 104_750_11405606_116_35397_057 Sorgh... 127 2e-028
gb|CL704122.2|CL704122 SP__Bb0010P10.f SP__Bb Sorghum propi... 126 7e-028
gb|BE596045.1|BE596045 PI1_51_F11.g1_A002 Pathogen induced ... 125 1e-027
gb|CW435810.1|CW435810 fsbb001f152c06k0 Sorghum methylation... 73 1e-025
gb|BG465821.1|BG465821 RHIZ2_45_A04.g1_A003 Rhizome2 (RHIZ2... 113 2e-025
gb|AW678428.1|AW678428 WS1_15_B04.g1_A002 Water-stressed 1 ... 112 3e-025
gb|AW678429.1|AW678429 WS1_15_B03.g1_A002 Water-stressed 1 ... 110 1e-024
gb|BZ627054.1|BZ627054 ih50a05.b1 WGS-SbicolorF (DH5a methy... 100 5e-024
gb|BG054057.1|BG054057 OV2_1_H05.g1_A002 Ovary 2 (OV2) Sorg... 112 1e-023
gb|BG488446.1|BG488446 RHIZ2_63_G11.b1_A003 Rhizome2 (RHIZ2... 107 2e-022
gb|BM326867.1|BM326867 PIC1_4_B01.g1_A002 Pathogen-infected... 105 8e-022
gb|AW672444.1|AW672444 LG1_359_C11.g1_A002 Light Grown 1 (L... 105 2e-021
>gb|BF177098.1|BF177098 EM1_3_F08.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 603
Score = 270 bits (585), Expect(2) = 3e-075
Identities = 120/157 (76%), Positives = 126/157 (80%)
Frame = +3 / +2
Query: 408 QALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYS 587
QALRYLYIRWGVELSNITV+VGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYS
Sbjct: 2 QALRYLYIRWGVELSNITVVVGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYS 181
Query: 588 SQDVVSFDKQGIASIEGYGPDNLKSALRQFGILKD*IFDLCWSAEESKQVS*DSFATNFF 767
QDVVS +KQGIASIEGYGPDNLKSALRQFGI KD*IFDL + +FF
Sbjct: 182 FQDVVSLEKQGIASIEGYGPDNLKSALRQFGISKD*IFDLAGQQRNQTRYLETVLLQSFF 361
Query: 768 LMLRDISHPRSAFEVQS*NYMCAFET*RANTQTDTYL 878
LM IS R FEVQS NYMCA ET*+ +TQ DT L
Sbjct: 362 LMWSVISCQRPTFEVQSRNYMCASET*KEDTQNDTCL 472
Score = 210 bits (452), Expect(4) = 1e-085
Identities = 90/100 (90%), Positives = 93/100 (93%)
Frame = -1 / -2
Query: 708 KDQRFSLSIYQIAVELTLDCLDHIPQLKQFLVCQRIQHLGMNSFC*HELGLEQY*TSL*V 529
+DQRFSLSIYQIA+EL LDCLDHIPQLKQFLV Q IQHLGMNSFC*H LGLEQY*TSL*V
Sbjct: 302 QDQRFSLSIYQIALELILDCLDHIPQLKQFLVSQGIQHLGMNSFC*HGLGLEQY*TSL*V 123
Query: 528 **FCARLQVVLHNLCHHTHRQSR*CLTALPPIGYTNTLKP 409
**FCARLQVVLHNLCHH HRQ +*CLTALPPI YTNTLKP
Sbjct: 122 **FCARLQVVLHNLCHHIHRQPQ*CLTALPPI*YTNTLKP 3
Score = 207 bits (447), Expect(4) = 2e-074
Identities = 93/101 (92%), Positives = 97/101 (96%)
Frame = -2 / -3
Query: 710 AKIKDLVFQYTKLP*S*L*IVWTISLN*SNSLFVKGYNILG*IASVSMNLVWSSIERAFE 531
+KIKDLVF+YTKLP*S* *IVWTISLN*SNSLF+KGYNIL *IASVSM+LVWSSIERAFE
Sbjct: 304 SKIKDLVFRYTKLP*S*F*IVWTISLN*SNSLFLKGYNILE*IASVSMDLVWSSIERAFE 125
Query: 530 YDSFVHASK*SFIICVTTLTDNHGDV*QLYPPSDIQIP*SL 408
YDSFVHASK*SFIICVTT TDNH DV*QLYPPSDIQIP*SL
Sbjct: 124 YDSFVHASK*SFIICVTTFTDNHSDV*QLYPPSDIQIP*SL 2
Score = 193 bits (417), Expect(4) = 2e-076
Identities = 90/99 (90%), Positives = 92/99 (92%)
Frame = +1 / +3
Query: 409 RL*GICISDGG*SCQTSP*LSVSVVTQIMKDYLEACTKLSYSKARSILLQTKFMLTEAIH 588
RL*GICISDGG*SCQTS LSV+VVTQIMKDYLEACTKLSYSKARSILLQTK MLTEAIH
Sbjct: 3 RL*GICISDGG*SCQTSLWLSVNVVTQIMKDYLEACTKLSYSKARSILLQTKSMLTEAIH 182
Query: 589 PKMLYPLTNKELLQLRDMVQTI*SQLYGNLVY*KTKSLI 705
KMLYPL NKELLQLRDMVQTI*+QL GNLVY KTKSLI
Sbjct: 183 SKMLYPLRNKELLQLRDMVQTI*NQL*GNLVYRKTKSLI 299
Score = 145 bits (312), Expect(5) = 3e-068
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +2 / +1
Query: 515 AQNYHTQRLVQYCSKPSSC*QKLFIPRCCIL*QTRNCFN*GIWSRQSKVSSTAIWYIERL 694
AQNYHTQRLVQYCSKPS C*QKLFIPRCCI *+TRNCFN*GIWSRQSK+SS AIWYIERL
Sbjct: 109 AQNYHTQRLVQYCSKPSPC*QKLFIPRCCIP*ETRNCFN*GIWSRQSKISSKAIWYIERL 288
Query: 695 NL*S 706
NL*S
Sbjct: 289 NL*S 300
Score = 142 bits (305), Expect(4) = 2e-059
Identities = 59/65 (90%), Positives = 62/65 (95%)
Frame = -3 / -1
Query: 706 RSKI*SFNIPNCRRADFRLSGPYPSIEAIPCLSKDTTSWDE*LLLA*TWFGAVLNEPLSM 527
RSKI*SF+IPNC RADFRLSGPYPSIEAIPC S+DTTSW+E*LLLA TWFGAVLNEPLSM
Sbjct: 300 RSKI*SFDIPNCLRADFRLSGPYPSIEAIPCFSRDTTSWNE*LLLAWTWFGAVLNEPLSM 121
Query: 526 IVLCT 512
IVLCT
Sbjct: 120 IVLCT 106
Score = 80.8 bits (170), Expect(4) = 1e-085
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = -1 / -2
Query: 879 VDKCRFVYLPFKFQKHTCNFNFALRMPILGVKYLSTLEKNL 757
VDKCRFVYLPFKFQKHTCNF+FALRM + G+K STLEK +
Sbjct: 473 VDKCRFVYLPFKFQKHTCNFDFALRMWVSGMK*HSTLEKKI 351
Score = 77.6 bits (163), Expect(4) = 2e-076
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +2 / +1
Query: 761 FFSNVERYFTPKIGIRSAKLKLHVCF*NLKGKYTNRHLST 880
FFSNVE YF P+ IRSAK KLHVCF*NLKG+YT RHLST
Sbjct: 355 FFSNVECYFMPETHIRSAKSKLHVCF*NLKGRYTKRHLST 474
Score = 74.8 bits (157), Expect(5) = 3e-068
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +1 / +3
Query: 760 IFF*C*EIFHTQDRHSKCKVEITCVLLKLKGQIHKPTLIY 879
+FF*C +FH +D HSKCKVEITCVLLKLK +IHK TL+Y
Sbjct: 354 LFF*CGVLFHARDPHSKCKVEITCVLLKLKRKIHKTTLVY 473
Score = 60.6 bits (126), Expect(4) = 2e-074
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = -3 / -1
Query: 880 CR*VSVCVFAL*VSKAHM*FQLCTSNADLGCEISLNIRKKFVAK 749
CR VS CV + *VS+AHM*F+LCTSN L EI+L+IRKK +K
Sbjct: 474 CRQVSFCVSSF*VSEAHM*FRLCTSNVGLWHEITLHIRKKDCSK 343
Score = 59.7 bits (124), Expect(4) = 2e-059
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = -2 / -3
Query: 881 M*ISVGLCICPLSFKSTHVISTLHFECRSWV*NISQH*KK 762
+* SV LCI LSF+STHVISTLHFEC S *N + H*KK
Sbjct: 475 L*TSVVLCIFLLSFRSTHVISTLHFECGSLA*NNTPH*KK 356
Score = 51.0 bits (105), Expect(5) = 3e-068
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +2 / +1
Query: 407 TGFKVFVYPMGGRAVKHHRDCR*V 478
TGFKVFVY MGGRAVKHH CR*+
Sbjct: 1 TGFKVFVYQMGGRAVKHHCGCR*M 72
Score = 49.2 bits (101), Expect(4) = 2e-059
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -3 / -1
Query: 469 TITVMFDSSTPHRIYKYLKAC 407
T TVMFDSSTPH IYKYLKAC
Sbjct: 63 TTTVMFDSSTPHLIYKYLKAC 1
Score = 45.1 bits (92), Expect(4) = 1e-085
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -2 / -1
Query: 767 KKICSKTVSRYLL*FLC*PAKIK 699
KK CSKTVSRYL+*FLC*PA+ K
Sbjct: 360 KKDCSKTVSRYLV*FLC*PARSK 292
Score = 41.4 bits (84), Expect(4) = 2e-076
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1 / +2
Query: 709 AGQQRNQSRYRETVLLQIFF 768
AGQQRNQ+RY ETVLLQ FF
Sbjct: 302 AGQQRNQTRYLETVLLQSFF 361
Score = 40.9 bits (83), Expect(4) = 1e-085
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3 / -2
Query: 922 LSR*ARCTVMGXKPCR*VSVCVF 854
L+R*ARCT+MG KPCR V C F
Sbjct: 524 LAR*ARCTIMGGKPCRVVDKCRF 456
Score = 38.2 bits (77), Expect(5) = 3e-068
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +3 / +1
Query: 708 CWSAEESKQVS*DSFATNFF 767
CWSAEES VS*DSF T FF
Sbjct: 301 CWSAEESN*VS*DSFTTIFF 360
Score = 37.7 bits (76), Expect(4) = 2e-074
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -3 / -2
Query: 772 IRKKFVAKLSHDTCFDSSADQQ 707
+ KK V KLS DT FDSSADQQ
Sbjct: 365 LEKKIVVKLSQDT*FDSSADQQ 300
Score = 36.8 bits (74), Expect(4) = 2e-076
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2 / +3
Query: 854 KYTNRHLSTWFXTHHSASCLST*T 925
K T + STWF +H+SASCLS+*T
Sbjct: 456 KTTLVYNSTWFSSHYSASCLSS*T 527
Score = 36.8 bits (74), Expect(4) = 2e-059
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -1 / -3
Query: 768 EKNL*QNCLTIPALIPLLTSK 706
+K L* NCL IP+LIPLLTSK
Sbjct: 361 KKRL**NCLKIPSLIPLLTSK 299
Score = 33.6 bits (67), Expect(2) = 3e-075
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +3 / +1
Query: 870 TYLHGXXPITVHLAYLLKRTR 932
T LHG PI VHLAYL K+ R
Sbjct: 472 TTLHGFPPIIVHLAYLAKQHR 534
Score = 32.7 bits (65), Expect(4) = 2e-074
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1 / -3
Query: 924 V*VDKQDAL*WVXNHVD 874
V*+DKQDAL*W NHV+
Sbjct: 526 V*LDKQDAL*WEENHVE 476
Score = 26.3 bits (51), Expect(5) = 3e-068
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1 / +2
Query: 874 IYMVXXPSQCILLIYLNAL 930
+YMV P CILLI LN++
Sbjct: 476 LYMVFLPL*CILLI*LNSI 532
>gb|BG103716.1|BG103716 RHIZ2_39_H10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 550
Score = 308 bits (667), Expect(2) = 8e-084
Identities = 130/135 (96%), Positives = 132/135 (97%)
Frame = +3 / +1
Query: 303 KEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNITVIVGECG 482
KEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNITV+VGECG
Sbjct: 1 KEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNITVVVGECG 180
Query: 483 DTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYSSQDVVSFDKQGIASIEGYGPDNLKS 662
DTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYS QDVVS +KQGIASIEGYGPDNLKS
Sbjct: 181 DTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYSFQDVVSLEKQGIASIEGYGPDNLKS 360
Query: 663 ALRQFGILKD*IFDL 707
ALRQFGI KD*IFDL
Sbjct: 361 ALRQFGISKD*IFDL 405
Score = 284 bits (614), Expect(2) = 3e-076
Identities = 126/136 (92%), Positives = 130/136 (95%)
Frame = -2 / -2
Query: 710 AKIKDLVFQYTKLP*S*L*IVWTISLN*SNSLFVKGYNILG*IASVSMNLVWSSIERAFE 531
+KIKDLVF+YTKLP*S* *IVWTISLN*SNSLF+KGYNIL *IASVSM+LVWSSIERAFE
Sbjct: 408 SKIKDLVFRYTKLP*S*F*IVWTISLN*SNSLFLKGYNILE*IASVSMDLVWSSIERAFE 229
Query: 530 YDSFVHASK*SFIICVTTLTDNHGDV*QLYPPSDIQIP*SL*ARSQNRNYIQLATIMAVQ 351
YDSFVHASK*SFIICVTT TDNH DV*QLYPPSDIQIP*SL*ARSQNRNYIQLATIMAVQ
Sbjct: 228 YDSFVHASK*SFIICVTTFTDNHSDV*QLYPPSDIQIP*SL*ARSQNRNYIQLATIMAVQ 49
Query: 350 NMATQCLYSHCPPNLL 303
NMA QCL SHCPPNLL
Sbjct: 48 NMAAQCLNSHCPPNLL 1
Score = 270 bits (584), Expect(2) = 4e-072
Identities = 112/124 (90%), Positives = 116/124 (93%)
Frame = -1 / -1
Query: 708 KDQRFSLSIYQIAVELTLDCLDHIPQLKQFLVCQRIQHLGMNSFC*HELGLEQY*TSL*V 529
+DQRFSLSIYQIA+EL LDCLDHIPQLKQFLV Q IQHLGMNSFC*H LGLEQY*TSL*V
Sbjct: 406 QDQRFSLSIYQIALELILDCLDHIPQLKQFLVSQGIQHLGMNSFC*HGLGLEQY*TSL*V 227
Query: 528 **FCARLQVVLHNLCHHTHRQSR*CLTALPPIGYTNTLKPVSEKPKQELHSTCYHHGCTK 349
**FCARLQVVLHNLCHH HRQ +*CLTALPPI YTNTLKPVSEKPKQELHS CYHHGCTK
Sbjct: 226 **FCARLQVVLHNLCHHIHRQPQ*CLTALPPI*YTNTLKPVSEKPKQELHSACYHHGCTK 47
Query: 348 HGNA 337
HG+A
Sbjct: 46 HGSA 35
Score = 257 bits (556), Expect(2) = 7e-068
Identities = 116/127 (91%), Positives = 119/127 (93%)
Frame = +1 / +2
Query: 325 EYKHCVAMFCTAMMVAS*M*FLFWLLAHRL*GICISDGG*SCQTSP*LSVSVVTQIMKDY 504
E+KHC AMFCTAMMVAS*M*FLFWLLAHRL*GICISDGG*SCQTS LSV+VVTQIMKDY
Sbjct: 23 EFKHCAAMFCTAMMVAS*M*FLFWLLAHRL*GICISDGG*SCQTSLWLSVNVVTQIMKDY 202
Query: 505 LEACTKLSYSKARSILLQTKFMLTEAIHPKMLYPLTNKELLQLRDMVQTI*SQLYGNLVY 684
LEACTKLSYSKARSILLQTK MLTEAIH KMLYPL NKELLQLRDMVQTI*+QL GNLVY
Sbjct: 203 LEACTKLSYSKARSILLQTKSMLTEAIHSKMLYPLRNKELLQLRDMVQTI*NQL*GNLVY 382
Query: 685 *KTKSLI 705
KTKSLI
Sbjct: 383 RKTKSLI 403
Score = 145 bits (312), Expect(2) = 6e-067
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +2 / +3
Query: 515 AQNYHTQRLVQYCSKPSSC*QKLFIPRCCIL*QTRNCFN*GIWSRQSKVSSTAIWYIERL 694
AQNYHTQRLVQYCSKPS C*QKLFIPRCCI *+TRNCFN*GIWSRQSK+SS AIWYIERL
Sbjct: 213 AQNYHTQRLVQYCSKPSPC*QKLFIPRCCIP*ETRNCFN*GIWSRQSKISSKAIWYIERL 392
Query: 695 NL*S 706
NL*S
Sbjct: 393 NL*S 404
Score = 142 bits (305), Expect(2) = 2e-063
Identities = 59/65 (90%), Positives = 62/65 (95%)
Frame = -3 / -3
Query: 706 RSKI*SFNIPNCRRADFRLSGPYPSIEAIPCLSKDTTSWDE*LLLA*TWFGAVLNEPLSM 527
RSKI*SF+IPNC RADFRLSGPYPSIEAIPC S+DTTSW+E*LLLA TWFGAVLNEPLSM
Sbjct: 404 RSKI*SFDIPNCLRADFRLSGPYPSIEAIPCFSRDTTSWNE*LLLAWTWFGAVLNEPLSM 225
Query: 526 IVLCT 512
IVLCT
Sbjct: 224 IVLCT 210
Score = 130 bits (279), Expect(2) = 6e-067
Identities = 52/58 (89%), Positives = 54/58 (93%)
Frame = +2 / +3
Query: 305 GD*EDNENTSTALPCFVQP*W*QVECNSCFGFSLTGFKVFVYPMGGRAVKHHRDCR*V 478
GD*EDNEN+STALPCFVQP*W*Q ECNSCFGFSLTGFKVFVY MGGRAVKHH CR*+
Sbjct: 3 GD*EDNENSSTALPCFVQP*W*QAECNSCFGFSLTGFKVFVYQMGGRAVKHHCGCR*M 176
Score = 122 bits (260), Expect(2) = 2e-063
Identities = 51/55 (92%), Positives = 52/55 (94%)
Frame = -3 / -3
Query: 469 TITVMFDSSTPHRIYKYLKACEREAKTGITFNLLPSWLYKTWQRSACILIVLLIS 305
T TVMFDSSTPH IYKYLKACEREAKTGITF+LLPSWLYKTWQRSA ILIVLLIS
Sbjct: 167 TTTVMFDSSTPHLIYKYLKACEREAKTGITFSLLPSWLYKTWQRSA*ILIVLLIS 3
Score = 24.4 bits (47), Expect(2) = 8e-084
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 709 AGQQRNQSRYRET 747
AGQQRNQ+R E+
Sbjct: 406 AGQQRNQTRIEES 444
Score = 23.5 bits (45), Expect(2) = 4e-072
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / -2
Query: 735 PALIPLLTSK 706
P+LIPLLTSK
Sbjct: 432 PSLIPLLTSK 403
Score = 23.5 bits (45), Expect(2) = 3e-076
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / -3
Query: 746 VSRYLL*FLC*PAKIK 699
+S L+*FLC*PA+ K
Sbjct: 443 LSSILV*FLC*PARSK 396
Score = 22.1 bits (42), Expect(2) = 7e-068
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / +3
Query: 708 CWSAEES 728
CWSAEES
Sbjct: 405 CWSAEES 425
>gb|BG410864.1|BG410864 EM1_26_H05.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 659
Score = 302 bits (653), Expect(2) = 7e-082
Identities = 127/132 (96%), Positives = 129/132 (97%)
Frame = +3 / +1
Query: 312 RRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTD 491
RRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNITV+VGECGDTD
Sbjct: 1 RRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNITVVVGECGDTD 180
Query: 492 YEGLLGGVHKTIILKGSFNTAPNQVHANRSYSSQDVVSFDKQGIASIEGYGPDNLKSALR 671
YEGLLGGVHKTIILKGSFNTAPNQVHANRSYS QDVVS +KQGIASIEGYGPDNLKSALR
Sbjct: 181 YEGLLGGVHKTIILKGSFNTAPNQVHANRSYSFQDVVSLEKQGIASIEGYGPDNLKSALR 360
Query: 672 QFGILKD*IFDL 707
QFGI KD*IFDL
Sbjct: 361 QFGISKD*IFDL 396
Score = 277 bits (599), Expect(2) = 3e-074
Identities = 122/133 (91%), Positives = 127/133 (95%)
Frame = -2 / -3
Query: 710 AKIKDLVFQYTKLP*S*L*IVWTISLN*SNSLFVKGYNILG*IASVSMNLVWSSIERAFE 531
+KIKDLVF+YTKLP*S* *IVWTISLN*SNSLF+KGYNIL *IASVSM+LVWSSIERAFE
Sbjct: 399 SKIKDLVFRYTKLP*S*F*IVWTISLN*SNSLFLKGYNILE*IASVSMDLVWSSIERAFE 220
Query: 530 YDSFVHASK*SFIICVTTLTDNHGDV*QLYPPSDIQIP*SL*ARSQNRNYIQLATIMAVQ 351
YDSFVHASK*SFIICVTT TDNH DV*QLYPPSDIQIP*SL*ARSQNRNY+QLATIMAVQ
Sbjct: 219 YDSFVHASK*SFIICVTTFTDNHSDV*QLYPPSDIQIP*SL*ARSQNRNYVQLATIMAVQ 40
Query: 350 NMATQCLYSHCPP 312
NMA QCL SHCPP
Sbjct: 39 NMAAQCLNSHCPP 1
Score = 266 bits (576), Expect(2) = 5e-071
Identities = 111/124 (89%), Positives = 115/124 (92%)
Frame = -1 / -2
Query: 708 KDQRFSLSIYQIAVELTLDCLDHIPQLKQFLVCQRIQHLGMNSFC*HELGLEQY*TSL*V 529
+DQRFSLSIYQIA+EL LDCLDHIPQLKQFLV Q IQHLGMNSFC*H LGLEQY*TSL*V
Sbjct: 397 QDQRFSLSIYQIALELILDCLDHIPQLKQFLVSQGIQHLGMNSFC*HGLGLEQY*TSL*V 218
Query: 528 **FCARLQVVLHNLCHHTHRQSR*CLTALPPIGYTNTLKPVSEKPKQELHSTCYHHGCTK 349
**FCARLQVVLHNLCHH HRQ +*CLTALPPI YTNTLKPVSEKPKQEL S CYHHGCTK
Sbjct: 217 **FCARLQVVLHNLCHHIHRQPQ*CLTALPPI*YTNTLKPVSEKPKQELRSACYHHGCTK 38
Query: 348 HGNA 337
HG+A
Sbjct: 37 HGSA 26
Score = 254 bits (550), Expect(2) = 4e-067
Identities = 115/127 (90%), Positives = 118/127 (92%)
Frame = +1 / +2
Query: 325 EYKHCVAMFCTAMMVAS*M*FLFWLLAHRL*GICISDGG*SCQTSP*LSVSVVTQIMKDY 504
E+KHC AMFCTAMMVAS* *FLFWLLAHRL*GICISDGG*SCQTS LSV+VVTQIMKDY
Sbjct: 14 EFKHCAAMFCTAMMVAS*T*FLFWLLAHRL*GICISDGG*SCQTSLWLSVNVVTQIMKDY 193
Query: 505 LEACTKLSYSKARSILLQTKFMLTEAIHPKMLYPLTNKELLQLRDMVQTI*SQLYGNLVY 684
LEACTKLSYSKARSILLQTK MLTEAIH KMLYPL NKELLQLRDMVQTI*+QL GNLVY
Sbjct: 194 LEACTKLSYSKARSILLQTKSMLTEAIHSKMLYPLRNKELLQLRDMVQTI*NQL*GNLVY 373
Query: 685 *KTKSLI 705
KTKSLI
Sbjct: 374 RKTKSLI 394
Score = 145 bits (312), Expect(2) = 2e-063
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +2 / +3
Query: 515 AQNYHTQRLVQYCSKPSSC*QKLFIPRCCIL*QTRNCFN*GIWSRQSKVSSTAIWYIERL 694
AQNYHTQRLVQYCSKPS C*QKLFIPRCCI *+TRNCFN*GIWSRQSK+SS AIWYIERL
Sbjct: 204 AQNYHTQRLVQYCSKPSPC*QKLFIPRCCIP*ETRNCFN*GIWSRQSKISSKAIWYIERL 383
Query: 695 NL*S 706
NL*S
Sbjct: 384 NL*S 395
Score = 142 bits (305), Expect(2) = 1e-061
Identities = 59/65 (90%), Positives = 62/65 (95%)
Frame = -3 / -1
Query: 706 RSKI*SFNIPNCRRADFRLSGPYPSIEAIPCLSKDTTSWDE*LLLA*TWFGAVLNEPLSM 527
RSKI*SF+IPNC RADFRLSGPYPSIEAIPC S+DTTSW+E*LLLA TWFGAVLNEPLSM
Sbjct: 395 RSKI*SFDIPNCLRADFRLSGPYPSIEAIPCFSRDTTSWNE*LLLAWTWFGAVLNEPLSM 216
Query: 526 IVLCT 512
IVLCT
Sbjct: 215 IVLCT 201
Score = 119 bits (254), Expect(2) = 2e-063
Identities = 48/55 (87%), Positives = 50/55 (90%)
Frame = +2 / +3
Query: 314 EDNENTSTALPCFVQP*W*QVECNSCFGFSLTGFKVFVYPMGGRAVKHHRDCR*V 478
EDNEN+STALPCFVQP*W*Q E NSCFGFSLTGFKVFVY MGGRAVKHH CR*+
Sbjct: 3 EDNENSSTALPCFVQP*W*QAERNSCFGFSLTGFKVFVYQMGGRAVKHHCGCR*M 167
Score = 116 bits (248), Expect(2) = 1e-061
Identities = 48/52 (92%), Positives = 49/52 (94%)
Frame = -3 / -1
Query: 469 TITVMFDSSTPHRIYKYLKACEREAKTGITFNLLPSWLYKTWQRSACILIVL 314
T TVMFDSSTPH IYKYLKACEREAKTGITF+LLPSWLYKTWQRSA ILIVL
Sbjct: 158 TTTVMFDSSTPHLIYKYLKACEREAKTGITFSLLPSWLYKTWQRSA*ILIVL 3
Score = 24.4 bits (47), Expect(2) = 7e-082
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 709 AGQQRNQSRYRET 747
AGQQRNQ+R E+
Sbjct: 397 AGQQRNQTRIEES 435
Score = 23.5 bits (45), Expect(2) = 5e-071
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / -3
Query: 735 PALIPLLTSK 706
P+LIPLLTSK
Sbjct: 423 PSLIPLLTSK 394
Score = 23.5 bits (45), Expect(2) = 3e-074
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / -1
Query: 746 VSRYLL*FLC*PAKIK 699
+S L+*FLC*PA+ K
Sbjct: 434 LSSILV*FLC*PARSK 387
Score = 22.1 bits (42), Expect(2) = 4e-067
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / +3
Query: 708 CWSAEES 728
CWSAEES
Sbjct: 396 CWSAEES 416
>gb|BE597862.1|BE597862 PI1_66_C12.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 666
Score = 269 bits (581), Expect(2) = 5e-072
Identities = 113/118 (95%), Positives = 115/118 (97%)
Frame = +3 / +2
Query: 354 YSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIIL 533
YSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNITV+VGECGDTDYEGLLGGVHKTIIL
Sbjct: 2 YSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNITVVVGECGDTDYEGLLGGVHKTIIL 181
Query: 534 KGSFNTAPNQVHANRSYSSQDVVSFDKQGIASIEGYGPDNLKSALRQFGILKD*IFDL 707
KGSFNTAPNQVHANRSYS QDVVS +KQGIASIEGYGPDNLKSALRQFGI KD*IFDL
Sbjct: 182 KGSFNTAPNQVHANRSYSFQDVVSLEKQGIASIEGYGPDNLKSALRQFGISKD*IFDL 355
Score = 253 bits (547), Expect(2) = 4e-067
Identities = 106/118 (89%), Positives = 109/118 (92%)
Frame = -1 / -2
Query: 708 KDQRFSLSIYQIAVELTLDCLDHIPQLKQFLVCQRIQHLGMNSFC*HELGLEQY*TSL*V 529
+DQRFSLSIYQIA+EL LDCLDHIPQLKQFLV Q IQHLGMNSFC*H LGLEQY*TSL*V
Sbjct: 356 QDQRFSLSIYQIALELILDCLDHIPQLKQFLVSQGIQHLGMNSFC*HGLGLEQY*TSL*V 177
Query: 528 **FCARLQVVLHNLCHHTHRQSR*CLTALPPIGYTNTLKPVSEKPKQELHSTCYHHGC 355
**FCARLQVVLHNLCHH HRQ +*CLTALPPI YTNTLKPVSEKPKQEL S CYHHGC
Sbjct: 176 **FCARLQVVLHNLCHHIHRQPQ*CLTALPPI*YTNTLKPVSEKPKQELRSACYHHGC 3
Score = 244 bits (528), Expect(2) = 2e-064
Identities = 110/119 (92%), Positives = 115/119 (96%)
Frame = -2 / -3
Query: 710 AKIKDLVFQYTKLP*S*L*IVWTISLN*SNSLFVKGYNILG*IASVSMNLVWSSIERAFE 531
+KIKDLVF+YTKLP*S* *IVWTISLN*SNSLF+KGYNIL *IASVSM+LVWSSIERAFE
Sbjct: 358 SKIKDLVFRYTKLP*S*F*IVWTISLN*SNSLFLKGYNILE*IASVSMDLVWSSIERAFE 179
Query: 530 YDSFVHASK*SFIICVTTLTDNHGDV*QLYPPSDIQIP*SL*ARSQNRNYIQLATIMAV 354
YDSFVHASK*SFIICVTT TDNH DV*QLYPPSDIQIP*SL*ARSQNRNY+QLATIMAV
Sbjct: 178 YDSFVHASK*SFIICVTTFTDNHSDV*QLYPPSDIQIP*SL*ARSQNRNYVQLATIMAV 2
Score = 230 bits (496), Expect(2) = 1e-059
Identities = 107/117 (91%), Positives = 109/117 (93%)
Frame = +1 / +3
Query: 355 TAMMVAS*M*FLFWLLAHRL*GICISDGG*SCQTSP*LSVSVVTQIMKDYLEACTKLSYS 534
TAMMVAS* *FLFWLLAHRL*GICISDGG*SCQTS LSV+VVTQIMKDYLEACTKLSYS
Sbjct: 3 TAMMVAS*T*FLFWLLAHRL*GICISDGG*SCQTSLWLSVNVVTQIMKDYLEACTKLSYS 182
Query: 535 KARSILLQTKFMLTEAIHPKMLYPLTNKELLQLRDMVQTI*SQLYGNLVY*KTKSLI 705
KARSILLQTK MLTEAIH KMLYPL NKELLQLRDMVQTI*+QL GNLVY KTKSLI
Sbjct: 183 KARSILLQTKSMLTEAIHSKMLYPLRNKELLQLRDMVQTI*NQL*GNLVYRKTKSLI 353
Score = 145 bits (312), Expect(2) = 3e-054
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +2 / +1
Query: 515 AQNYHTQRLVQYCSKPSSC*QKLFIPRCCIL*QTRNCFN*GIWSRQSKVSSTAIWYIERL 694
AQNYHTQRLVQYCSKPS C*QKLFIPRCCI *+TRNCFN*GIWSRQSK+SS AIWYIERL
Sbjct: 163 AQNYHTQRLVQYCSKPSPC*QKLFIPRCCIP*ETRNCFN*GIWSRQSKISSKAIWYIERL 342
Query: 695 NL*S 706
NL*S
Sbjct: 343 NL*S 354
Score = 142 bits (305), Expect(2) = 3e-054
Identities = 59/65 (90%), Positives = 62/65 (95%)
Frame = -3 / -1
Query: 706 RSKI*SFNIPNCRRADFRLSGPYPSIEAIPCLSKDTTSWDE*LLLA*TWFGAVLNEPLSM 527
RSKI*SF+IPNC RADFRLSGPYPSIEAIPC S+DTTSW+E*LLLA TWFGAVLNEPLSM
Sbjct: 354 RSKI*SFDIPNCLRADFRLSGPYPSIEAIPCFSRDTTSWNE*LLLAWTWFGAVLNEPLSM 175
Query: 526 IVLCT 512
IVLCT
Sbjct: 174 IVLCT 160
Score = 91.3 bits (193), Expect(2) = 3e-054
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = -3 / -1
Query: 469 TITVMFDSSTPHRIYKYLKACEREAKTGITFNLLPSWLY 353
T TVMFDSSTPH IYKYLKACEREAKTGITF+LLPSWLY
Sbjct: 117 TTTVMFDSSTPHLIYKYLKACEREAKTGITFSLLPSWLY 1
Score = 88.1 bits (186), Expect(2) = 3e-054
Identities = 36/42 (85%), Positives = 37/42 (88%)
Frame = +2 / +1
Query: 353 VQP*W*QVECNSCFGFSLTGFKVFVYPMGGRAVKHHRDCR*V 478
VQP*W*Q E NSCFGFSLTGFKVFVY MGGRAVKHH CR*+
Sbjct: 1 VQP*W*QAERNSCFGFSLTGFKVFVYQMGGRAVKHHCGCR*M 126
Score = 24.4 bits (47), Expect(2) = 5e-072
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 709 AGQQRNQSRYRET 747
AGQQRNQ+R E+
Sbjct: 356 AGQQRNQTRIEES 394
Score = 23.5 bits (45), Expect(2) = 2e-064
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / -3
Query: 735 PALIPLLTSK 706
P+LIPLLTSK
Sbjct: 382 PSLIPLLTSK 353
Score = 23.5 bits (45), Expect(2) = 4e-067
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / -1
Query: 746 VSRYLL*FLC*PAKIK 699
+S L+*FLC*PA+ K
Sbjct: 393 LSSILV*FLC*PARSK 346
Score = 22.1 bits (42), Expect(2) = 1e-059
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / +1
Query: 708 CWSAEES 728
CWSAEES
Sbjct: 355 CWSAEES 375
>gb|CN130960.1|CN130960 RHOH1_45_B03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_45_B03_A002 3', mRNA sequence
Length = 836
Score = 215 bits (464), Expect(3) = 9e-072
Identities = 87/163 (53%), Positives = 117/163 (71%)
Frame = +3 / +3
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSK 374
E+ ++I ED E SSTY ++F+ N PP+KE+++ MRIQ+LRCH LY+H ++
Sbjct: 210 ERRGRTEKQIIFEDSEHSSTYRLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGAAR 389
Query: 375 LNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKGSFNTA 554
L+VIP+ ASRSQALRYL IRWG+EL + VIVGE GD+DYE L GG+HKT+ILKG FNT
Sbjct: 390 LSVIPIHASRSQALRYLSIRWGIELPDAVVIVGETGDSDYEELFGGLHKTVILKGGFNTP 569
Query: 555 PNQVHANRSYSSQDVVSFDKQGIASIEGYGPDNLKSALRQFGI 683
N++H R Y QDVV+ D I IEG+ +++SA++Q GI
Sbjct: 570 ANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQQLGI 698
Score = 64.3 bits (134), Expect(3) = 9e-072
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = +3 / +3
Query: 69 SSSEDMLNPAELPFMIDLDYHSQIEYRWGGEGLRKTLIRWAAEKNKERGQ 218
S S D+ + + + F +D +Y S IEYRWGGEGLRK L++WA+ + RG+
Sbjct: 75 SQSSDVPSNSRVTFALDHNYRSHIEYRWGGEGLRKYLVKWASSVVERRGR 224
Score = 31.8 bits (63), Expect(3) = 9e-072
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3 / +3
Query: 3 GIEASXFXAFICNXXXDLXXPSSSSE 80
G+ + F AFICN D+ PS SS+
Sbjct: 12 GMLPTDFDAFICNSGSDIYYPSQSSD 89
>gb|BG241433.1|BG241433 RHIZ2_49_B06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 524
Score = 156 bits (336), Expect(4) = 2e-069
Identities = 67/71 (94%), Positives = 68/71 (95%)
Frame = +3 / +3
Query: 495 EGLLGGVHKTIILKGSFNTAPNQVHANRSYSSQDVVSFDKQGIASIEGYGPDNLKSALRQ 674
EGLLGGVHKTIILKGSFNTAPNQVHANRSYS QDVVS +KQGIASIEGYGPDNLKSALRQ
Sbjct: 3 EGLLGGVHKTIILKGSFNTAPNQVHANRSYSFQDVVSLEKQGIASIEGYGPDNLKSALRQ 182
Query: 675 FGILKD*IFDL 707
FGI KD*IFDL
Sbjct: 183 FGISKD*IFDL 215
Score = 149 bits (320), Expect(4) = 1e-067
Identities = 66/72 (91%), Positives = 68/72 (94%)
Frame = -1 / -3
Query: 708 KDQRFSLSIYQIAVELTLDCLDHIPQLKQFLVCQRIQHLGMNSFC*HELGLEQY*TSL*V 529
+DQRFSLSIYQIA+EL LDCLDHIPQLKQFLV Q IQHLGMNSFC*H LGLEQY*TSL*V
Sbjct: 216 QDQRFSLSIYQIALELILDCLDHIPQLKQFLVSQGIQHLGMNSFC*HGLGLEQY*TSL*V 37
Query: 528 **FCARLQVVLH 493
**FCARLQVVLH
Sbjct: 36 **FCARLQVVLH 1
Score = 145 bits (312), Expect(4) = 1e-059
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +2 / +2
Query: 515 AQNYHTQRLVQYCSKPSSC*QKLFIPRCCIL*QTRNCFN*GIWSRQSKVSSTAIWYIERL 694
AQNYHTQRLVQYCSKPS C*QKLFIPRCCI *+TRNCFN*GIWSRQSK+SS AIWYIERL
Sbjct: 23 AQNYHTQRLVQYCSKPSPC*QKLFIPRCCIP*ETRNCFN*GIWSRQSKISSKAIWYIERL 202
Query: 695 NL*S 706
NL*S
Sbjct: 203 NL*S 214
Score = 145 bits (311), Expect(4) = 1e-057
Identities = 66/72 (91%), Positives = 70/72 (97%)
Frame = -2 / -1
Query: 710 AKIKDLVFQYTKLP*S*L*IVWTISLN*SNSLFVKGYNILG*IASVSMNLVWSSIERAFE 531
+KIKDLVF+YTKLP*S* *IVWTISLN*SNSLF+KGYNIL *IASVSM+LVWSSIERAFE
Sbjct: 218 SKIKDLVFRYTKLP*S*F*IVWTISLN*SNSLFLKGYNILE*IASVSMDLVWSSIERAFE 39
Query: 530 YDSFVHASK*SF 495
YDSFVHASK*SF
Sbjct: 38 YDSFVHASK*SF 3
Score = 143 bits (306), Expect(4) = 1e-053
Identities = 65/71 (91%), Positives = 66/71 (92%)
Frame = +1 / +1
Query: 493 MKDYLEACTKLSYSKARSILLQTKFMLTEAIHPKMLYPLTNKELLQLRDMVQTI*SQLYG 672
MKDYLEACTKLSYSKARSILLQTK MLTEAIH KMLYPL NKELLQLRDMVQTI*+QL G
Sbjct: 1 MKDYLEACTKLSYSKARSILLQTKSMLTEAIHSKMLYPLRNKELLQLRDMVQTI*NQL*G 180
Query: 673 NLVY*KTKSLI 705
NLVY KTKSLI
Sbjct: 181 NLVYRKTKSLI 213
Score = 142 bits (305), Expect(2) = 7e-045
Identities = 59/65 (90%), Positives = 62/65 (95%)
Frame = -3 / -2
Query: 706 RSKI*SFNIPNCRRADFRLSGPYPSIEAIPCLSKDTTSWDE*LLLA*TWFGAVLNEPLSM 527
RSKI*SF+IPNC RADFRLSGPYPSIEAIPC S+DTTSW+E*LLLA TWFGAVLNEPLSM
Sbjct: 214 RSKI*SFDIPNCLRADFRLSGPYPSIEAIPCFSRDTTSWNE*LLLAWTWFGAVLNEPLSM 35
Query: 526 IVLCT 512
IVLCT
Sbjct: 34 IVLCT 20
Score = 82.2 bits (173), Expect(4) = 2e-069
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = +2 / +2
Query: 761 FFSNVERYFTPKIGIRSAKLKLHVCF*NLKGKYTNRHLST 880
FFSNVERYF P+ IRSAK+K+HVCF*NLKG+YT RHLST
Sbjct: 269 FFSNVERYFMPETHIRSAKMKIHVCF*NLKGRYTKRHLST 388
Score = 80.3 bits (169), Expect(4) = 1e-067
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -1 / -3
Query: 879 VDKCRFVYLPFKFQKHTCNFNFALRMPILGVKYLSTLEKNL 757
VDKCRFVYLPFKFQKHTC F FALRM + G+KY STLEK +
Sbjct: 387 VDKCRFVYLPFKFQKHTCIFIFALRMWVSGMKYRSTLEKKI 265
Score = 68.9 bits (144), Expect(4) = 1e-059
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +1 / +1
Query: 763 FF*C*EIFHTQDRHSKCKVEITCVLLKLKGQIHKPTLIY 879
FF*C IFH +D HSKCK E TCVLLKLK +IHK TL+Y
Sbjct: 271 FF*CGAIFHARDPHSKCKDENTCVLLKLKRKIHKTTLVY 387
Score = 64.8 bits (135), Expect(4) = 1e-057
Identities = 30/44 (68%), Positives = 33/44 (75%)
Frame = -3 / -2
Query: 880 CR*VSVCVFAL*VSKAHM*FQLCTSNADLGCEISLNIRKKFVAK 749
CR VS CV + *VSKAHM F LCTSN LG EISL+IRKK +K
Sbjct: 388 CRQVSFCVSSF*VSKAHMYFHLCTSNVGLGHEISLHIRKKNCSK 257
Score = 61.1 bits (127), Expect(4) = 1e-053
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3 / +3
Query: 762 FFLMLRDISHPRSAFEVQS*NYMCAFET*RANTQTDTYL 878
FFLM DIS PR FEVQ * YMCAFET*+ +TQ DT L
Sbjct: 270 FFLMWSDISCPRPTFEVQR*KYMCAFET*KEDTQNDTCL 386
Score = 60.2 bits (125), Expect(2) = 7e-045
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = -2 / -1
Query: 881 M*ISVGLCICPLSFKSTHVISTLHFECRSWV*NISQH*KK 762
+* SV LCI LSFKSTHV S+LHFEC S *NI+ H*KK
Sbjct: 389 L*TSVVLCIFLLSFKSTHVFSSLHFECGSRA*NIAPH*KK 270
Score = 45.5 bits (93), Expect(4) = 2e-069
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1 / +3
Query: 709 AGQQRNQSRYRETVLLQIFF 768
AGQQRNQ+RYRETVLLQ FF
Sbjct: 216 AGQQRNQTRYRETVLLQFFF 275
Score = 45.1 bits (92), Expect(4) = 1e-067
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -2 / -2
Query: 767 KKICSKTVSRYLL*FLC*PAKIK 699
KK CSKTVSRYL+*FLC*PA+ K
Sbjct: 274 KKNCSKTVSRYLV*FLC*PARSK 206
Score = 40.9 bits (83), Expect(4) = 1e-067
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3 / -3
Query: 922 LSR*ARCTVMGXKPCR*VSVCVF 854
L+R*ARCT+MG KPCR V C F
Sbjct: 438 LAR*ARCTIMGGKPCRAVDKCRF 370
Score = 40.5 bits (82), Expect(4) = 1e-059
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +2 / +1
Query: 707 LLVSRGIKAGIVRQFCYKFF 766
LLVSRGIK GIVRQF Y FF
Sbjct: 214 LLVSRGIKLGIVRQFYYNFF 273
Score = 39.6 bits (80), Expect(4) = 1e-057
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -1 / -1
Query: 768 EKNL*QNCLTIPALIPLLTSK 706
+K L* NCLTIP+LIPLLTSK
Sbjct: 275 KKKL**NCLTIPSLIPLLTSK 213
Score = 38.2 bits (77), Expect(4) = 1e-053
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +3 / +2
Query: 708 CWSAEESKQVS*DSFATNFF 767
CWSAEES VS*DSF T FF
Sbjct: 215 CWSAEESN*VS*DSFTTIFF 274
Score = 37.3 bits (75), Expect(4) = 2e-069
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2 / +1
Query: 854 KYTNRHLSTWFXTHHSASCLST*T 925
K T + STWF +H+SASCLS+*T
Sbjct: 370 KTTLVYSSTWFSSHYSASCLSS*T 441
Score = 33.6 bits (67), Expect(4) = 1e-059
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +3 / +2
Query: 870 TYLHGXXPITVHLAYLLKRTR 932
T LHG PI VHLAYL K+ R
Sbjct: 386 TALHGFPPIIVHLAYLAKQHR 448
Score = 32.7 bits (65), Expect(4) = 1e-057
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1 / -1
Query: 924 V*VDKQDAL*WVXNHVD 874
V*+DKQDAL*W NHV+
Sbjct: 440 V*LDKQDAL*WEENHVE 390
Score = 26.3 bits (51), Expect(4) = 1e-053
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1 / +3
Query: 874 IYMVXXPSQCILLIYLNAL 930
+YMV P CILLI LN++
Sbjct: 390 LYMVFLPL*CILLI*LNSI 446
>gb|BE364125.1|BE364125 PI1_11_D07.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 653
Score = 221 bits (476), Expect(2) = 2e-068
Identities = 88/163 (53%), Positives = 118/163 (72%)
Frame = +3 / +1
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSK 374
E+ ++I ED E SSTYC++F+ N PP+KE+++ MRIQ+LRCH LY+H ++
Sbjct: 127 ERRGRTEKQIIFEDSEHSSTYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATR 306
Query: 375 LNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKGSFNTA 554
L+VIP+ ASRSQALRYL IRWG+EL + VIVGE GD+DYE L GG+HKT+ILKG FNT
Sbjct: 307 LSVIPIHASRSQALRYLSIRWGIELPDAVVIVGETGDSDYEELFGGLHKTVILKGGFNTP 486
Query: 555 PNQVHANRSYSSQDVVSFDKQGIASIEGYGPDNLKSALRQFGI 683
N++H R Y QDVV+ D I IEG+ +++SA++Q GI
Sbjct: 487 ANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQQLGI 615
Score = 68.9 bits (144), Expect(3) = 5e-021
Identities = 38/80 (47%), Positives = 47/80 (58%)
Frame = -3 / -1
Query: 469 TITVMFDSSTPHRIYKYLKACEREAKTGITFNLLPSWLYKTWQRSACILIVLLISFTGGA 290
T+T +S P RI KYL+A +R+A GIT +L+ WLY+ QRS ILI SF GG
Sbjct: 401 TMTTASGNSMPQRIDKYLRA*DRDA*IGITDSLVAPWLYRA*QRSDWILINFCSSFKGGK 222
Query: 289 AAVLDPLNEMQ*VDEHSSSS 230
L LN Q V+E S SS
Sbjct: 221 *FGLTTLNARQYVEECSESS 162
Score = 60.6 bits (126), Expect(2) = 2e-068
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +3 / +1
Query: 81 DMLNPAELPFMIDLDYHSQIEYRWGGEGLRKTLIRWAAEKNKERGQ 218
D+ + + + F +D +Y S IEYRWGGEGLRK L++WA+ + RG+
Sbjct: 4 DVPSNSRVTFALDHNYRSHIEYRWGGEGLRKYLVKWASSVVERRGR 141
Score = 37.7 bits (76), Expect(3) = 5e-021
Identities = 25/55 (45%), Positives = 27/55 (49%)
Frame = -3 / -1
Query: 682 IPNCRRADFRLSGPYPSIEAIPCLSKDTTSWDE*LLLA*TWFGAVLNEPLSMIVL 518
IP+C AD PSI I LS+ TTS LL F VLN PL M VL
Sbjct: 614 IPSCCIADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLRMTVL 450
Score = 33.6 bits (67), Expect(3) = 5e-021
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -3 / -1
Query: 214 PLSLFFSAAQRINVFLKPSPPQRYSI 137
PL A FLKPSPPQRYSI
Sbjct: 137 PLLSTTEEAHLTKYFLKPSPPQRYSI 60
>gb|BF422038.1|BF422038 FM1_12_B10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 673
Score = 254 bits (549), Expect(2) = 1e-067
Identities = 108/114 (94%), Positives = 110/114 (96%)
Frame = +3 / +3
Query: 366 GSKLNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKGSF 545
GSKLNVIPVLASRSQALRYLYIRW VELSNITV+VGECGDTDYEGLLGGVHKTIILKGSF
Sbjct: 3 GSKLNVIPVLASRSQALRYLYIRWXVELSNITVVVGECGDTDYEGLLGGVHKTIILKGSF 182
Query: 546 NTAPNQVHANRSYSSQDVVSFDKQGIASIEGYGPDNLKSALRQFGILKD*IFDL 707
NTAPNQVHANRSYS QDVVS +KQGIASIEGYGPDNLKSALRQFGI KD*IFDL
Sbjct: 183 NTAPNQVHANRSYSFQDVVSLEKQGIASIEGYGPDNLKSALRQFGISKD*IFDL 344
Score = 246 bits (532), Expect(2) = 5e-065
Identities = 104/115 (90%), Positives = 107/115 (93%)
Frame = -1 / -2
Query: 708 KDQRFSLSIYQIAVELTLDCLDHIPQLKQFLVCQRIQHLGMNSFC*HELGLEQY*TSL*V 529
+DQRFSLSIYQIA+EL LDCLDHIPQLKQFLV Q IQHLGMNSFC*H LGLEQY*TSL*V
Sbjct: 345 QDQRFSLSIYQIALELILDCLDHIPQLKQFLVSQGIQHLGMNSFC*HGLGLEQY*TSL*V 166
Query: 528 **FCARLQVVLHNLCHHTHRQSR*CLTALPPIGYTNTLKPVSEKPKQELHSTCYH 364
**FCARLQVVLHNLCHH HRQ +*CLTALPPI YTNTLKPVSEKPKQELHS CYH
Sbjct: 165 **FCARLQVVLHNLCHHIHRQPQ*CLTALPPI*YTNTLKPVSEKPKQELHSACYH 1
Score = 233 bits (503), Expect(2) = 5e-061
Identities = 106/115 (92%), Positives = 110/115 (95%)
Frame = -2 / -3
Query: 710 AKIKDLVFQYTKLP*S*L*IVWTISLN*SNSLFVKGYNILG*IASVSMNLVWSSIERAFE 531
+KIKDLVF+YTKLP*S* *IVWTISLN*SNSLF+KGYNIL *IASVSM+LVWSSIERAFE
Sbjct: 347 SKIKDLVFRYTKLP*S*F*IVWTISLN*SNSLFLKGYNILE*IASVSMDLVWSSIERAFE 168
Query: 530 YDSFVHASK*SFIICVTTLTDNHGDV*QLYPPSDIQIP*SL*ARSQNRNYIQLAT 366
YDSFVHASK*SFIICVTT TDNH DV*QLY PSDIQIP*SL*ARSQNRNYIQLAT
Sbjct: 167 YDSFVHASK*SFIICVTTFTDNHSDV*QLYXPSDIQIP*SL*ARSQNRNYIQLAT 3
Score = 223 bits (481), Expect(2) = 1e-057
Identities = 104/114 (91%), Positives = 106/114 (92%)
Frame = +1 / +1
Query: 364 MVAS*M*FLFWLLAHRL*GICISDGG*SCQTSP*LSVSVVTQIMKDYLEACTKLSYSKAR 543
MVAS*M*FLFWLLAHRL*GICISDG *SCQTS LSV+VVTQIMKDYLEACTKLSYSKAR
Sbjct: 1 MVAS*M*FLFWLLAHRL*GICISDGX*SCQTSLWLSVNVVTQIMKDYLEACTKLSYSKAR 180
Query: 544 SILLQTKFMLTEAIHPKMLYPLTNKELLQLRDMVQTI*SQLYGNLVY*KTKSLI 705
SILLQTK MLTEAIH KMLYPL NKELLQLRDMVQTI*+QL GNLVY KTKSLI
Sbjct: 181 SILLQTKSMLTEAIHSKMLYPLRNKELLQLRDMVQTI*NQL*GNLVYRKTKSLI 342
Score = 145 bits (312), Expect(2) = 2e-053
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +2 / +2
Query: 515 AQNYHTQRLVQYCSKPSSC*QKLFIPRCCIL*QTRNCFN*GIWSRQSKVSSTAIWYIERL 694
AQNYHTQRLVQYCSKPS C*QKLFIPRCCI *+TRNCFN*GIWSRQSK+SS AIWYIERL
Sbjct: 152 AQNYHTQRLVQYCSKPSPC*QKLFIPRCCIP*ETRNCFN*GIWSRQSKISSKAIWYIERL 331
Query: 695 NL*S 706
NL*S
Sbjct: 332 NL*S 343
Score = 142 bits (305), Expect(2) = 2e-049
Identities = 59/65 (90%), Positives = 62/65 (95%)
Frame = -3 / -1
Query: 706 RSKI*SFNIPNCRRADFRLSGPYPSIEAIPCLSKDTTSWDE*LLLA*TWFGAVLNEPLSM 527
RSKI*SF+IPNC RADFRLSGPYPSIEAIPC S+DTTSW+E*LLLA TWFGAVLNEPLSM
Sbjct: 343 RSKI*SFDIPNCLRADFRLSGPYPSIEAIPCFSRDTTSWNE*LLLAWTWFGAVLNEPLSM 164
Query: 526 IVLCT 512
IVLCT
Sbjct: 163 IVLCT 149
Score = 85.8 bits (181), Expect(2) = 2e-053
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +2 / +2
Query: 365 W*QVECNSCFGFSLTGFKVFVYPMGGRAVKHHRDCR*V 478
W*Q ECNSCFGFSLTGFKVFVY MGGRAVKHH CR*+
Sbjct: 2 W*QAECNSCFGFSLTGFKVFVYQMGGRAVKHHCGCR*M 115
Score = 75.3 bits (158), Expect(2) = 2e-049
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = -3 / -1
Query: 469 TITVMFDSSTPHRIYKYLKACEREAKTGITFNLLP 365
T TVMFDSST H IYKYLKACEREAKTGITF+LLP
Sbjct: 106 TTTVMFDSSTXHLIYKYLKACEREAKTGITFSLLP 2
Score = 24.4 bits (47), Expect(2) = 1e-067
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 709 AGQQRNQSRYRET 747
AGQQRNQ+R E+
Sbjct: 345 AGQQRNQTRIEES 383
Score = 23.5 bits (45), Expect(2) = 5e-061
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / -3
Query: 735 PALIPLLTSK 706
P+LIPLLTSK
Sbjct: 371 PSLIPLLTSK 342
Score = 23.5 bits (45), Expect(2) = 5e-065
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / -1
Query: 746 VSRYLL*FLC*PAKIK 699
+S L+*FLC*PA+ K
Sbjct: 382 LSSILV*FLC*PARSK 335
Score = 22.1 bits (42), Expect(2) = 1e-057
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / +2
Query: 708 CWSAEES 728
CWSAEES
Sbjct: 344 CWSAEES 364
>gb|BM318323.1|BM318323 PI1_77_C05.g9_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 575
Score = 233 bits (504), Expect(2) = 2e-061
Identities = 98/103 (95%), Positives = 100/103 (97%)
Frame = +3 / +2
Query: 399 SRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANR 578
SRSQALRYLYIRWGVELSNITV+VGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANR
Sbjct: 2 SRSQALRYLYIRWGVELSNITVVVGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANR 181
Query: 579 SYSSQDVVSFDKQGIASIEGYGPDNLKSALRQFGILKD*IFDL 707
SYS QDVVS +KQGIASIEGYGPDNLKSALRQFGI KD*IFDL
Sbjct: 182 SYSFQDVVSLEKQGIASIEGYGPDNLKSALRQFGISKD*IFDL 310
Score = 215 bits (465), Expect(2) = 8e-056
Identities = 93/103 (90%), Positives = 96/103 (93%)
Frame = -1 / -1
Query: 708 KDQRFSLSIYQIAVELTLDCLDHIPQLKQFLVCQRIQHLGMNSFC*HELGLEQY*TSL*V 529
+DQRFSLSIYQIA+EL LDCLDHIPQLKQFLV Q IQHLGMNSFC*H LGLEQY*TSL*V
Sbjct: 311 QDQRFSLSIYQIALELILDCLDHIPQLKQFLVSQGIQHLGMNSFC*HGLGLEQY*TSL*V 132
Query: 528 **FCARLQVVLHNLCHHTHRQSR*CLTALPPIGYTNTLKPVSE 400
**FCARLQVVLHNLCHH HRQ +*CLTALPPI YTNTLKPVSE
Sbjct: 131 **FCARLQVVLHNLCHHIHRQPQ*CLTALPPI*YTNTLKPVSE 3
Score = 212 bits (457), Expect(2) = 1e-054
Identities = 96/104 (92%), Positives = 100/104 (96%)
Frame = -2 / -2
Query: 710 AKIKDLVFQYTKLP*S*L*IVWTISLN*SNSLFVKGYNILG*IASVSMNLVWSSIERAFE 531
+KIKDLVF+YTKLP*S* *IVWTISLN*SNSLF+KGYNIL *IASVSM+LVWSSIERAFE
Sbjct: 313 SKIKDLVFRYTKLP*S*F*IVWTISLN*SNSLFLKGYNILE*IASVSMDLVWSSIERAFE 134
Query: 530 YDSFVHASK*SFIICVTTLTDNHGDV*QLYPPSDIQIP*SL*AR 399
YDSFVHASK*SFIICVTT TDNH DV*QLYPPSDIQIP*SL*AR
Sbjct: 133 YDSFVHASK*SFIICVTTFTDNHSDV*QLYPPSDIQIP*SL*AR 2
Score = 201 bits (433), Expect(2) = 5e-051
Identities = 93/102 (91%), Positives = 95/102 (93%)
Frame = +1 / +3
Query: 400 LAHRL*GICISDGG*SCQTSP*LSVSVVTQIMKDYLEACTKLSYSKARSILLQTKFMLTE 579
LAHRL*GICISDGG*SCQTS LSV+VVTQIMKDYLEACTKLSYSKARSILLQTK MLTE
Sbjct: 3 LAHRL*GICISDGG*SCQTSLWLSVNVVTQIMKDYLEACTKLSYSKARSILLQTKSMLTE 182
Query: 580 AIHPKMLYPLTNKELLQLRDMVQTI*SQLYGNLVY*KTKSLI 705
AIH KMLYPL NKELLQLRDMVQTI*+QL GNLVY KTKSLI
Sbjct: 183 AIHSKMLYPLRNKELLQLRDMVQTI*NQL*GNLVYRKTKSLI 308
Score = 145 bits (312), Expect(3) = 5e-045
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +2 / +1
Query: 515 AQNYHTQRLVQYCSKPSSC*QKLFIPRCCIL*QTRNCFN*GIWSRQSKVSSTAIWYIERL 694
AQNYHTQRLVQYCSKPS C*QKLFIPRCCI *+TRNCFN*GIWSRQSK+SS AIWYIERL
Sbjct: 118 AQNYHTQRLVQYCSKPSPC*QKLFIPRCCIP*ETRNCFN*GIWSRQSKISSKAIWYIERL 297
Query: 695 NL*S 706
NL*S
Sbjct: 298 NL*S 309
Score = 142 bits (305), Expect(2) = 1e-043
Identities = 59/65 (90%), Positives = 62/65 (95%)
Frame = -3 / -3
Query: 706 RSKI*SFNIPNCRRADFRLSGPYPSIEAIPCLSKDTTSWDE*LLLA*TWFGAVLNEPLSM 527
RSKI*SF+IPNC RADFRLSGPYPSIEAIPC S+DTTSW+E*LLLA TWFGAVLNEPLSM
Sbjct: 309 RSKI*SFDIPNCLRADFRLSGPYPSIEAIPCFSRDTTSWNE*LLLAWTWFGAVLNEPLSM 130
Query: 526 IVLCT 512
IVLCT
Sbjct: 129 IVLCT 115
Score = 57.4 bits (119), Expect(3) = 5e-045
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +2 / +1
Query: 398 FSLTGFKVFVYPMGGRAVKHHRDCR*V 478
FSLTGFKVFVY MGGRAVKHH CR*+
Sbjct: 1 FSLTGFKVFVYQMGGRAVKHHCGCR*M 81
Score = 56.1 bits (116), Expect(2) = 1e-043
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = -3 / -3
Query: 469 TITVMFDSSTPHRIYKYLKACERE 398
T TVMFDSSTPH IYKYLKACERE
Sbjct: 72 TTTVMFDSSTPHLIYKYLKACERE 1
Score = 24.4 bits (47), Expect(2) = 2e-061
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 709 AGQQRNQSRYRET 747
AGQQRNQ+R E+
Sbjct: 311 AGQQRNQTRIEES 349
Score = 23.5 bits (45), Expect(2) = 1e-054
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / -2
Query: 735 PALIPLLTSK 706
P+LIPLLTSK
Sbjct: 337 PSLIPLLTSK 308
Score = 23.5 bits (45), Expect(2) = 8e-056
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / -3
Query: 746 VSRYLL*FLC*PAKIK 699
+S L+*FLC*PA+ K
Sbjct: 348 LSSILV*FLC*PARSK 301
Score = 22.1 bits (42), Expect(2) = 5e-051
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / +1
Query: 708 CWSAEES 728
CWSAEES
Sbjct: 310 CWSAEES 330
Score = 21.7 bits (41), Expect(3) = 5e-045
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 707 LLVSRGIKAG 736
LLVSRGIK G
Sbjct: 309 LLVSRGIKLG 338
>gb|BG488129.1|BG488129 RHIZ2_63_G11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 525
Score = 125 bits (267), Expect(4) = 5e-060
Identities = 51/56 (91%), Positives = 53/56 (94%)
Frame = +2 / +1
Query: 539 LVQYCSKPSSC*QKLFIPRCCIL*QTRNCFN*GIWSRQSKVSSTAIWYIERLNL*S 706
LVQYCSKPS C*QKLFIPRCCI *+TRNCFN*GIWSRQSK+SS AIWYIERLNL*S
Sbjct: 1 LVQYCSKPSPC*QKLFIPRCCIP*ETRNCFN*GIWSRQSKISSKAIWYIERLNL*S 168
Score = 122 bits (260), Expect(4) = 1e-052
Identities = 52/56 (92%), Positives = 53/56 (94%)
Frame = +3 / +2
Query: 540 SFNTAPNQVHANRSYSSQDVVSFDKQGIASIEGYGPDNLKSALRQFGILKD*IFDL 707
SFNTAPNQVHANRSYS QDVVS +KQGIASIEGYGPDNLKSALRQFGI KD*IFDL
Sbjct: 2 SFNTAPNQVHANRSYSFQDVVSLEKQGIASIEGYGPDNLKSALRQFGISKD*IFDL 169
Score = 121 bits (259), Expect(4) = 3e-059
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = -3 / -1
Query: 706 RSKI*SFNIPNCRRADFRLSGPYPSIEAIPCLSKDTTSWDE*LLLA*TWFGAVLNE 539
RSKI*SF+IPNC RADFRLSGPYPSIEAIPC S+DTTSW+E*LLLA TWFGAVLNE
Sbjct: 168 RSKI*SFDIPNCLRADFRLSGPYPSIEAIPCFSRDTTSWNE*LLLAWTWFGAVLNE 1
Score = 118 bits (252), Expect(4) = 1e-049
Identities = 50/56 (89%), Positives = 52/56 (92%)
Frame = -1 / -2
Query: 708 KDQRFSLSIYQIAVELTLDCLDHIPQLKQFLVCQRIQHLGMNSFC*HELGLEQY*T 541
+DQRFSLSIYQIA+EL LDCLDHIPQLKQFLV Q IQHLGMNSFC*H LGLEQY*T
Sbjct: 170 QDQRFSLSIYQIALELILDCLDHIPQLKQFLVSQGIQHLGMNSFC*HGLGLEQY*T 3
Score = 111 bits (237), Expect(2) = 1e-035
Identities = 51/57 (89%), Positives = 55/57 (96%)
Frame = -2 / -3
Query: 710 AKIKDLVFQYTKLP*S*L*IVWTISLN*SNSLFVKGYNILG*IASVSMNLVWSSIER 540
+KIKDLVF+YTKLP*S* *IVWTISLN*SNSLF+KGYNIL *IASVSM+LVWSSIER
Sbjct: 172 SKIKDLVFRYTKLP*S*F*IVWTISLN*SNSLFLKGYNILE*IASVSMDLVWSSIER 2
Score = 105 bits (223), Expect(4) = 2e-042
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = +1 / +3
Query: 541 RSILLQTKFMLTEAIHPKMLYPLTNKELLQLRDMVQTI*SQLYGNLVY*KTKSLI 705
RSILLQTK MLTEAIH KMLYPL NKELLQLRDMVQTI*+QL GNLVY KTKSLI
Sbjct: 3 RSILLQTKSMLTEAIHSKMLYPLRNKELLQLRDMVQTI*NQL*GNLVYRKTKSLI 167
Score = 82.2 bits (173), Expect(4) = 5e-060
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = +2 / +1
Query: 761 FFSNVERYFTPKIGIRSAKLKLHVCF*NLKGKYTNRHLST 880
FFSNVERYF P+ IRSAK+K+HVCF*NLKG+YT RHLST
Sbjct: 223 FFSNVERYFMPETHIRSAKMKIHVCF*NLKGRYTKRHLST 342
Score = 80.3 bits (169), Expect(4) = 3e-059
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -1 / -2
Query: 879 VDKCRFVYLPFKFQKHTCNFNFALRMPILGVKYLSTLEKNL 757
VDKCRFVYLPFKFQKHTC F FALRM + G+KY STLEK +
Sbjct: 341 VDKCRFVYLPFKFQKHTCIFIFALRMWVSGMKYRSTLEKKI 219
Score = 68.9 bits (144), Expect(4) = 1e-052
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +1 / +3
Query: 763 FF*C*EIFHTQDRHSKCKVEITCVLLKLKGQIHKPTLIY 879
FF*C IFH +D HSKCK E TCVLLKLK +IHK TL+Y
Sbjct: 225 FF*CGAIFHARDPHSKCKDENTCVLLKLKRKIHKTTLVY 341
Score = 64.8 bits (135), Expect(4) = 1e-049
Identities = 30/44 (68%), Positives = 33/44 (75%)
Frame = -3 / -1
Query: 880 CR*VSVCVFAL*VSKAHM*FQLCTSNADLGCEISLNIRKKFVAK 749
CR VS CV + *VSKAHM F LCTSN LG EISL+IRKK +K
Sbjct: 342 CRQVSFCVSSF*VSKAHMYFHLCTSNVGLGHEISLHIRKKNCSK 211
Score = 61.1 bits (127), Expect(4) = 2e-042
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3 / +2
Query: 762 FFLMLRDISHPRSAFEVQS*NYMCAFET*RANTQTDTYL 878
FFLM DIS PR FEVQ * YMCAFET*+ +TQ DT L
Sbjct: 224 FFLMWSDISCPRPTFEVQR*KYMCAFET*KEDTQNDTCL 340
Score = 60.2 bits (125), Expect(2) = 1e-035
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = -2 / -3
Query: 881 M*ISVGLCICPLSFKSTHVISTLHFECRSWV*NISQH*KK 762
+* SV LCI LSFKSTHV S+LHFEC S *NI+ H*KK
Sbjct: 343 L*TSVVLCIFLLSFKSTHVFSSLHFECGSRA*NIAPH*KK 224
Score = 45.5 bits (93), Expect(4) = 5e-060
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1 / +2
Query: 709 AGQQRNQSRYRETVLLQIFF 768
AGQQRNQ+RYRETVLLQ FF
Sbjct: 170 AGQQRNQTRYRETVLLQFFF 229
Score = 45.1 bits (92), Expect(4) = 3e-059
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -2 / -1
Query: 767 KKICSKTVSRYLL*FLC*PAKIK 699
KK CSKTVSRYL+*FLC*PA+ K
Sbjct: 228 KKNCSKTVSRYLV*FLC*PARSK 160
Score = 40.9 bits (83), Expect(4) = 3e-059
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3 / -2
Query: 922 LSR*ARCTVMGXKPCR*VSVCVF 854
L+R*ARCT+MG KPCR V C F
Sbjct: 392 LAR*ARCTIMGGKPCRAVDKCRF 324
Score = 40.5 bits (82), Expect(4) = 1e-052
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +2 / +3
Query: 707 LLVSRGIKAGIVRQFCYKFF 766
LLVSRGIK GIVRQF Y FF
Sbjct: 168 LLVSRGIKLGIVRQFYYNFF 227
Score = 39.6 bits (80), Expect(4) = 1e-049
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -1 / -3
Query: 768 EKNL*QNCLTIPALIPLLTSK 706
+K L* NCLTIP+LIPLLTSK
Sbjct: 229 KKKL**NCLTIPSLIPLLTSK 167
Score = 38.2 bits (77), Expect(4) = 2e-042
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +3 / +1
Query: 708 CWSAEESKQVS*DSFATNFF 767
CWSAEES VS*DSF T FF
Sbjct: 169 CWSAEESN*VS*DSFTTIFF 228
Score = 37.3 bits (75), Expect(4) = 5e-060
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2 / +3
Query: 854 KYTNRHLSTWFXTHHSASCLST*T 925
K T + STWF +H+SASCLS+*T
Sbjct: 324 KTTLVYSSTWFSSHYSASCLSS*T 395
Score = 33.6 bits (67), Expect(4) = 1e-052
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +3 / +1
Query: 870 TYLHGXXPITVHLAYLLKRTR 932
T LHG PI VHLAYL K+ R
Sbjct: 340 TALHGFPPIIVHLAYLAKQHR 402
Score = 32.7 bits (65), Expect(4) = 1e-049
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1 / -3
Query: 924 V*VDKQDAL*WVXNHVD 874
V*+DKQDAL*W NHV+
Sbjct: 394 V*LDKQDAL*WEENHVE 344
Score = 26.3 bits (51), Expect(4) = 2e-042
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1 / +2
Query: 874 IYMVXXPSQCILLIYLNAL 930
+YMV P CILLI LN++
Sbjct: 344 LYMVFLPL*CILLI*LNSI 400
>gb|CD212733.1|CD212733 HS1_16_B05.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_16_B05_A012 3', mRNA sequence
Length = 606
Score = 207 bits (446), Expect(2) = 2e-053
Identities = 86/91 (94%), Positives = 88/91 (96%)
Frame = +3 / +2
Query: 435 WGVELSNITVIVGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYSSQDVVSFDK 614
WGVELSNITV+VGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYS QDVVS +K
Sbjct: 2 WGVELSNITVVVGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYSFQDVVSLEK 181
Query: 615 QGIASIEGYGPDNLKSALRQFGILKD*IFDL 707
QGIASIEGYGPDNLKSALRQFGI KD*IFDL
Sbjct: 182 QGIASIEGYGPDNLKSALRQFGISKD*IFDL 274
Score = 189 bits (407), Expect(2) = 7e-048
Identities = 81/91 (89%), Positives = 84/91 (92%)
Frame = -1 / -2
Query: 708 KDQRFSLSIYQIAVELTLDCLDHIPQLKQFLVCQRIQHLGMNSFC*HELGLEQY*TSL*V 529
+DQRFSLSIYQIA+EL LDCLDHIPQLKQFLV Q IQHLGMNSFC*H LGLEQY*TSL*V
Sbjct: 275 QDQRFSLSIYQIALELILDCLDHIPQLKQFLVSQGIQHLGMNSFC*HGLGLEQY*TSL*V 96
Query: 528 **FCARLQVVLHNLCHHTHRQSR*CLTALPP 436
**FCARL VVLHNLCHH HRQ +*CLTALPP
Sbjct: 95 **FCARLXVVLHNLCHHIHRQPQ*CLTALPP 3
Score = 187 bits (402), Expect(2) = 5e-047
Identities = 83/92 (90%), Positives = 87/92 (94%)
Frame = -2 / -3
Query: 710 AKIKDLVFQYTKLP*S*L*IVWTISLN*SNSLFVKGYNILG*IASVSMNLVWSSIERAFE 531
+KIKDLVF+YTKLP*S* *IVWTISLN*SNSLF+KGYNIL *IASVSM+LVWSSIERAFE
Sbjct: 277 SKIKDLVFRYTKLP*S*F*IVWTISLN*SNSLFLKGYNILE*IASVSMDLVWSSIERAFE 98
Query: 530 YDSFVHASK*SFIICVTTLTDNHGDV*QLYPP 435
YDSFVHAS *SFIICVTT TDNH DV*QLYPP
Sbjct: 97 YDSFVHASX*SFIICVTTFTDNHSDV*QLYPP 2
Score = 171 bits (369), Expect(2) = 2e-042
Identities = 80/90 (88%), Positives = 82/90 (91%)
Frame = +1 / +3
Query: 436 GG*SCQTSP*LSVSVVTQIMKDYLEACTKLSYSKARSILLQTKFMLTEAIHPKMLYPLTN 615
GG*SCQTS LSV+VVTQIMKDY EACTKLSYSKARSILLQTK MLTEAIH KMLYPL N
Sbjct: 3 GG*SCQTSLWLSVNVVTQIMKDYXEACTKLSYSKARSILLQTKSMLTEAIHSKMLYPLRN 182
Query: 616 KELLQLRDMVQTI*SQLYGNLVY*KTKSLI 705
KELLQLRDMVQTI*+QL GNLVY KTKSLI
Sbjct: 183 KELLQLRDMVQTI*NQL*GNLVYRKTKSLI 272
Score = 145 bits (312), Expect(3) = 2e-037
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +2 / +1
Query: 515 AQNYHTQRLVQYCSKPSSC*QKLFIPRCCIL*QTRNCFN*GIWSRQSKVSSTAIWYIERL 694
AQNYHTQRLVQYCSKPS C*QKLFIPRCCI *+TRNCFN*GIWSRQSK+SS AIWYIERL
Sbjct: 82 AQNYHTQRLVQYCSKPSPC*QKLFIPRCCIP*ETRNCFN*GIWSRQSKISSKAIWYIERL 261
Query: 695 NL*S 706
NL*S
Sbjct: 262 NL*S 273
Score = 142 bits (305), Expect(2) = 1e-035
Identities = 59/65 (90%), Positives = 62/65 (95%)
Frame = -3 / -1
Query: 706 RSKI*SFNIPNCRRADFRLSGPYPSIEAIPCLSKDTTSWDE*LLLA*TWFGAVLNEPLSM 527
RSKI*SF+IPNC RADFRLSGPYPSIEAIPC S+DTTSW+E*LLLA TWFGAVLNEPLSM
Sbjct: 273 RSKI*SFDIPNCLRADFRLSGPYPSIEAIPCFSRDTTSWNE*LLLAWTWFGAVLNEPLSM 94
Query: 526 IVLCT 512
IVLCT
Sbjct: 93 IVLCT 79
Score = 31.8 bits (63), Expect(3) = 2e-037
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2 / +1
Query: 434 MGGRAVKHHRDCR*V 478
MGGRAVKHH CR*+
Sbjct: 1 MGGRAVKHHCGCR*M 45
Score = 29.5 bits (58), Expect(2) = 1e-035
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3 / -1
Query: 469 TITVMFDSSTPH 434
T TVMFDSSTPH
Sbjct: 36 TTTVMFDSSTPH 1
Score = 24.4 bits (47), Expect(2) = 2e-053
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 709 AGQQRNQSRYRET 747
AGQQRNQ+R E+
Sbjct: 275 AGQQRNQTRIEES 313
Score = 23.5 bits (45), Expect(2) = 7e-048
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / -1
Query: 746 VSRYLL*FLC*PAKIK 699
+S L+*FLC*PA+ K
Sbjct: 312 LSSILV*FLC*PARSK 265
Score = 23.1 bits (44), Expect(2) = 5e-047
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 735 PALIPLLTSK 706
P LIPLLTSK
Sbjct: 301 PCLIPLLTSK 272
Score = 22.6 bits (43), Expect(2) = 2e-042
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3 / +1
Query: 708 CWSAEESKQ 734
CWSAEES +
Sbjct: 274 CWSAEESNK 300
Score = 21.7 bits (41), Expect(3) = 2e-037
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 707 LLVSRGIKAG 736
LLVSRGIK G
Sbjct: 273 LLVSRGIKQG 302
>gb|BG050643.1|BG050643 FM1_70_H01.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 461
Score = 209 bits (451), Expect = 5e-053
Identities = 82/145 (56%), Positives = 109/145 (75%)
Frame = +3 / +2
Query: 249 STYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLY 428
STYC++F+ N PP+KE+++ MRIQ+LRCH LY+H ++L+VIP+ ASRSQALRYL
Sbjct: 2 STYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIPIHASRSQALRYLS 181
Query: 429 IRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYSSQDVVSF 608
IRWG+EL + VIVGE GD+DYE L GG+HKT+ILKG FNT N++H R Y QDVV+
Sbjct: 182 IRWGIELPDAVVIVGETGDSDYEELFGGLHKTVILKGGFNTPANRIHTVRRYPLQDVVAL 361
Query: 609 DKQGIASIEGYGPDNLKSALRQFGI 683
D I IEG+ +++SA++Q GI
Sbjct: 362 DSSNIIGIEGFSTGDIRSAMQQLGI 436
>gb|CX614951.1|CX614951 GABR1_17_F12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_17_F12_A002 3', mRNA sequence
Length = 740
Score = 194 bits (419), Expect(2) = 5e-051
Identities = 77/130 (59%), Positives = 100/130 (76%)
Frame = +3 / +2
Query: 297 PVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNITVIVGE 476
P E+R+ MRIQ+LRC+ LY+H ++L+V+P+ ASRSQALRYL IRWG+E+ N+ V+VGE
Sbjct: 80 PNHELRKLMRIQSLRCNALYNHSATRLSVVPIHASRSQALRYLCIRWGIEVPNVAVLVGE 259
Query: 477 CGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYSSQDVVSFDKQGIASIEGYGPDNL 656
GD+DYE LLGG+H+TIILKG FN N++H R Y QDVV+ D I +EGY D+L
Sbjct: 260 SGDSDYEELLGGLHRTIILKGEFNIPANRIHTVRRYPLQDVVALDSSNIIGVEGYTTDDL 439
Query: 657 KSALRQFGIL 686
KSAL+Q GIL
Sbjct: 440 KSALQQMGIL 469
Score = 28.6 bits (56), Expect(2) = 5e-051
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3 / +2
Query: 216 QKIFIEDEECSSTYCISFKGSN 281
++I +ED E SS YC++F+ N
Sbjct: 14 RQIILEDPEHSSAYCLAFRVVN 79
>gb|BG241327.1|BG241327 RHIZ2_49_A07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 577
Score = 191 bits (412), Expect(2) = 8e-049
Identities = 80/85 (94%), Positives = 82/85 (96%)
Frame = +3 / +1
Query: 453 NITVIVGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYSSQDVVSFDKQGIASI 632
NITV+VGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYS QDVVS +KQGIASI
Sbjct: 1 NITVVVGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYSFQDVVSLEKQGIASI 180
Query: 633 EGYGPDNLKSALRQFGILKD*IFDL 707
EGYGPDNLKSALRQFGI KD*IFDL
Sbjct: 181 EGYGPDNLKSALRQFGISKD*IFDL 255
Score = 177 bits (382), Expect(2) = 2e-044
Identities = 76/85 (89%), Positives = 79/85 (92%)
Frame = -1 / -1
Query: 708 KDQRFSLSIYQIAVELTLDCLDHIPQLKQFLVCQRIQHLGMNSFC*HELGLEQY*TSL*V 529
+DQRFSLSIYQIA+EL LDCLDHIPQLKQFLV Q IQHLGMNSFC*H LGLEQY*TSL*V
Sbjct: 256 QDQRFSLSIYQIALELILDCLDHIPQLKQFLVSQGIQHLGMNSFC*HGLGLEQY*TSL*V 77
Query: 528 **FCARLQVVLHNLCHHTHRQSR*C 454
**FCARLQVVLHNLCHH HRQ +*C
Sbjct: 76 **FCARLQVVLHNLCHHIHRQPQ*C 2
Score = 175 bits (377), Expect(2) = 9e-044
Identities = 78/86 (90%), Positives = 82/86 (95%)
Frame = -2 / -2
Query: 710 AKIKDLVFQYTKLP*S*L*IVWTISLN*SNSLFVKGYNILG*IASVSMNLVWSSIERAFE 531
+KIKDLVF+YTKLP*S* *IVWTISLN*SNSLF+KGYNIL *IASVSM+LVWSSIERAFE
Sbjct: 258 SKIKDLVFRYTKLP*S*F*IVWTISLN*SNSLFLKGYNILE*IASVSMDLVWSSIERAFE 79
Query: 530 YDSFVHASK*SFIICVTTLTDNHGDV 453
YDSFVHASK*SFIICVTT TDNH DV
Sbjct: 78 YDSFVHASK*SFIICVTTFTDNHSDV 1
Score = 160 bits (343), Expect(2) = 1e-038
Identities = 75/84 (89%), Positives = 77/84 (91%)
Frame = +1 / +2
Query: 454 TSP*LSVSVVTQIMKDYLEACTKLSYSKARSILLQTKFMLTEAIHPKMLYPLTNKELLQL 633
TS LSV+VVTQIMKDYLEACTKLSYSKARSILLQTK MLTEAIH KMLYPL NKELLQL
Sbjct: 2 TSLWLSVNVVTQIMKDYLEACTKLSYSKARSILLQTKSMLTEAIHSKMLYPLRNKELLQL 181
Query: 634 RDMVQTI*SQLYGNLVY*KTKSLI 705
RDMVQTI*+QL GNLVY KTKSLI
Sbjct: 182 RDMVQTI*NQL*GNLVYRKTKSLI 253
Score = 145 bits (312), Expect = 8e-034
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +2 / +3
Query: 515 AQNYHTQRLVQYCSKPSSC*QKLFIPRCCIL*QTRNCFN*GIWSRQSKVSSTAIWYIERL 694
AQNYHTQRLVQYCSKPS C*QKLFIPRCCI *+TRNCFN*GIWSRQSK+SS AIWYIERL
Sbjct: 63 AQNYHTQRLVQYCSKPSPC*QKLFIPRCCIP*ETRNCFN*GIWSRQSKISSKAIWYIERL 242
Query: 695 NL*S 706
NL*S
Sbjct: 243 NL*S 254
Score = 142 bits (305), Expect = 8e-033
Identities = 59/65 (90%), Positives = 62/65 (95%)
Frame = -3 / -3
Query: 706 RSKI*SFNIPNCRRADFRLSGPYPSIEAIPCLSKDTTSWDE*LLLA*TWFGAVLNEPLSM 527
RSKI*SF+IPNC RADFRLSGPYPSIEAIPC S+DTTSW+E*LLLA TWFGAVLNEPLSM
Sbjct: 254 RSKI*SFDIPNCLRADFRLSGPYPSIEAIPCFSRDTTSWNE*LLLAWTWFGAVLNEPLSM 75
Query: 526 IVLCT 512
IVLCT
Sbjct: 74 IVLCT 60
Score = 24.4 bits (47), Expect(2) = 8e-049
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 709 AGQQRNQSRYRET 747
AGQQRNQ+R E+
Sbjct: 256 AGQQRNQTRIEES 294
Score = 23.5 bits (45), Expect(2) = 9e-044
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / -2
Query: 735 PALIPLLTSK 706
P+LIPLLTSK
Sbjct: 282 PSLIPLLTSK 253
Score = 23.5 bits (45), Expect(2) = 2e-044
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / -3
Query: 746 VSRYLL*FLC*PAKIK 699
+S L+*FLC*PA+ K
Sbjct: 293 LSSILV*FLC*PARSK 246
Score = 22.1 bits (42), Expect(2) = 1e-038
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / +3
Query: 708 CWSAEES 728
CWSAEES
Sbjct: 255 CWSAEES 275
>gb|BG463033.1|BG463033 EM1_46_F12.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 648
Score = 176 bits (379), Expect = 5e-043
Identities = 69/116 (59%), Positives = 89/116 (76%)
Frame = +3 / +3
Query: 339 RCHVLYSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVH 518
RC+ LY+H ++L+V+P+ ASRSQALRYL IRWG+E+ N+ V+VGE GD+DYE LLGG+H
Sbjct: 3 RCNALYNHSATRLSVVPIHASRSQALRYLCIRWGIEVPNVAVLVGESGDSDYEELLGGLH 182
Query: 519 KTIILKGSFNTAPNQVHANRSYSSQDVVSFDKQGIASIEGYGPDNLKSALRQFGIL 686
+TIILKG FN N++H R Y QDVV+ D I +EGY D+LKSAL+Q GIL
Sbjct: 183 RTIILKGEFNIPANRIHTVRRYPLQDVVALDSSNIIGVEGYTTDDLKSALQQMGIL 350
>gb|BI099230.1|BI099230 IP1_40_A12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 630
Score = 170 bits (365), Expect = 4e-041
Identities = 67/114 (58%), Positives = 87/114 (76%)
Frame = +3 / +2
Query: 345 HVLYSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKT 524
+ LY+H ++L+V+P+ ASRSQALRYL IRWG+E+ N+ V+VGE GD+DYE LLGG+H+T
Sbjct: 2 NALYNHSATRLSVVPIHASRSQALRYLCIRWGIEVPNVAVLVGESGDSDYEELLGGLHRT 181
Query: 525 IILKGSFNTAPNQVHANRSYSSQDVVSFDKQGIASIEGYGPDNLKSALRQFGIL 686
IILKG FN N++H R Y QDVV+ D I +EGY D+LKSAL+Q GIL
Sbjct: 182 IILKGEFNIPANRIHTVRRYPLQDVVALDSSNIIGVEGYTTDDLKSALQQMGIL 343
>gb|BG462976.1|BG462976 EM1_46_A04.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 613
Score = 160 bits (343), Expect = 4e-038
Identities = 64/105 (60%), Positives = 81/105 (77%)
Frame = +3 / +3
Query: 372 KLNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKGSFNT 551
+L+V+P+ ASRSQALRYL IRWG+E+ N+ V+VGE GD+DYE LLGG+H+TIILKG FN
Sbjct: 3 RLSVVPIHASRSQALRYLCIRWGIEVPNVAVLVGESGDSDYEELLGGLHRTIILKGEFNI 182
Query: 552 APNQVHANRSYSSQDVVSFDKQGIASIEGYGPDNLKSALRQFGIL 686
N++H R Y QDVV+ D I +EGY D+LKSAL+Q GIL
Sbjct: 183 PANRIHTVRRYPLQDVVALDSSNIIGVEGYTTDDLKSALQQMGIL 317
>gb|BI099139.1|BI099139 IP1_38_B12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 583
Score = 150 bits (322), Expect = 3e-035
Identities = 61/97 (62%), Positives = 74/97 (76%)
Frame = +3 / +3
Query: 396 ASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHAN 575
ASRSQALRYL IRWG+E+ N+ V+VGE GD+DYE LLGG+H+TIILKG FN N++H
Sbjct: 6 ASRSQALRYLCIRWGIEVPNVAVLVGESGDSDYEELLGGLHRTIILKGEFNIPANRIHTV 185
Query: 576 RSYSSQDVVSFDKQGIASIEGYGPDNLKSALRQFGIL 686
R Y QDVV+ D I +EGY D+LKSAL+Q GIL
Sbjct: 186 RRYPLQDVVALDSSNIIGVEGYTTDDLKSALQQMGIL 296
>gb|BG487867.1|BG487867 RHIZ2_60_D03.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 523
Score = 145 bits (312), Expect(2) = 4e-035
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +2 / +1
Query: 515 AQNYHTQRLVQYCSKPSSC*QKLFIPRCCIL*QTRNCFN*GIWSRQSKVSSTAIWYIERL 694
AQNYHTQRLVQYCSKPS C*QKLFIPRCCI *+TRNCFN*GIWSRQSK+SS AIWYIERL
Sbjct: 10 AQNYHTQRLVQYCSKPSPC*QKLFIPRCCIP*ETRNCFN*GIWSRQSKISSKAIWYIERL 189
Query: 695 NL*S 706
NL*S
Sbjct: 190 NL*S 201
Score = 145 bits (311), Expect(2) = 2e-034
Identities = 62/66 (93%), Positives = 63/66 (95%)
Frame = +3 / +2
Query: 510 GVHKTIILKGSFNTAPNQVHANRSYSSQDVVSFDKQGIASIEGYGPDNLKSALRQFGILK 689
GVHKTIILKGSFNTAPNQVHANRSYS QDVVS +KQGIASIEGYGPDNLKSALRQFGI K
Sbjct: 5 GVHKTIILKGSFNTAPNQVHANRSYSFQDVVSLEKQGIASIEGYGPDNLKSALRQFGISK 184
Query: 690 D*IFDL 707
D*IFDL
Sbjct: 185 D*IFDL 202
Score = 142 bits (305), Expect(2) = 6e-034
Identities = 59/65 (90%), Positives = 62/65 (95%)
Frame = -3 / -2
Query: 706 RSKI*SFNIPNCRRADFRLSGPYPSIEAIPCLSKDTTSWDE*LLLA*TWFGAVLNEPLSM 527
RSKI*SF+IPNC RADFRLSGPYPSIEAIPC S+DTTSW+E*LLLA TWFGAVLNEPLSM
Sbjct: 201 RSKI*SFDIPNCLRADFRLSGPYPSIEAIPCFSRDTTSWNE*LLLAWTWFGAVLNEPLSM 22
Query: 526 IVLCT 512
IVLCT
Sbjct: 21 IVLCT 7
Score = 138 bits (295), Expect(2) = 1e-032
Identities = 61/67 (91%), Positives = 63/67 (94%)
Frame = -1 / -3
Query: 708 KDQRFSLSIYQIAVELTLDCLDHIPQLKQFLVCQRIQHLGMNSFC*HELGLEQY*TSL*V 529
+DQRFSLSIYQIA+EL LDCLDHIPQLKQFLV Q IQHLGMNSFC*H LGLEQY*TSL*V
Sbjct: 203 QDQRFSLSIYQIALELILDCLDHIPQLKQFLVSQGIQHLGMNSFC*HGLGLEQY*TSL*V 24
Query: 528 **FCARL 508
**FCARL
Sbjct: 23 **FCARL 3
Score = 136 bits (291), Expect = 6e-031
Identities = 61/67 (91%), Positives = 65/67 (97%)
Frame = -2 / -1
Query: 710 AKIKDLVFQYTKLP*S*L*IVWTISLN*SNSLFVKGYNILG*IASVSMNLVWSSIERAFE 531
+KIKDLVF+YTKLP*S* *IVWTISLN*SNSLF+KGYNIL *IASVSM+LVWSSIERAFE
Sbjct: 205 SKIKDLVFRYTKLP*S*F*IVWTISLN*SNSLFLKGYNILE*IASVSMDLVWSSIERAFE 26
Query: 530 YDSFVHA 510
YDSFVHA
Sbjct: 25 YDSFVHA 5
Score = 128 bits (274), Expect = 1e-028
Identities = 59/65 (90%), Positives = 60/65 (92%)
Frame = +1 / +3
Query: 511 ACTKLSYSKARSILLQTKFMLTEAIHPKMLYPLTNKELLQLRDMVQTI*SQLYGNLVY*K 690
ACTKLSYSKARSILLQTK MLTEAIH KMLYPL NKELLQLRDMVQTI*+QL GNLVY K
Sbjct: 6 ACTKLSYSKARSILLQTKSMLTEAIHSKMLYPLRNKELLQLRDMVQTI*NQL*GNLVYRK 185
Query: 691 TKSLI 705
TKSLI
Sbjct: 186 TKSLI 200
Score = 24.4 bits (47), Expect(2) = 4e-035
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 709 AGQQRNQSRYRET 747
AGQQRNQ+R E+
Sbjct: 203 AGQQRNQTRIEES 241
Score = 23.5 bits (45), Expect(2) = 1e-032
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / -1
Query: 735 PALIPLLTSK 706
P+LIPLLTSK
Sbjct: 229 PSLIPLLTSK 200
Score = 23.5 bits (45), Expect(2) = 6e-034
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / -2
Query: 746 VSRYLL*FLC*PAKIK 699
+S L+*FLC*PA+ K
Sbjct: 240 LSSILV*FLC*PARSK 193
Score = 22.1 bits (42), Expect(2) = 2e-034
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / +1
Query: 708 CWSAEES 728
CWSAEES
Sbjct: 202 CWSAEES 222
>gb|BM326900.1|BM326900 PIC1_4_E07.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 565
Score = 136 bits (292), Expect = 5e-031
Identities = 54/90 (60%), Positives = 67/90 (74%)
Frame = +3 / +1
Query: 417 RYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYSSQD 596
RYL IRWG+E+ N+ V+VGE GD+DYE LLGG+H+TIILKG FN N++H R Y QD
Sbjct: 1 RYLCIRWGIEVPNVAVLVGESGDSDYEELLGGLHRTIILKGEFNIPANRIHTVRRYPLQD 180
Query: 597 VVSFDKQGIASIEGYGPDNLKSALRQFGIL 686
VV+ D I +EGY D+LKSAL+Q GIL
Sbjct: 181 VVALDSSNIIGVEGYTTDDLKSALQQMGIL 270
>gb|BZ627055.1|BZ627055 ih50a05.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih50a05 5', DNA sequence
Length = 384
Score = 127 bits (273), Expect = 2e-028
Identities = 50/89 (56%), Positives = 64/89 (71%)
Frame = +3 / +1
Query: 417 RYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYSSQD 596
RYL IRWG+EL + VIVGE GD+DYE L GG+HKT+ILKG FNT N++H R Y QD
Sbjct: 43 RYLSIRWGIELPDAVVIVGETGDSDYEELFGGLHKTVILKGGFNTPANRIHTVRRYPLQD 222
Query: 597 VVSFDKQGIASIEGYGPDNLKSALRQFGI 683
VV+ D I IEG+ +++SA++Q GI
Sbjct: 223 VVALDSSNIIGIEGFSTGDIRSAMQQLGI 309
>gb|CW276652.1|CW276652 104_750_11405606_116_35397_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405606, DNA
sequence
Length = 704
Score = 127 bits (273), Expect = 2e-028
Identities = 50/89 (56%), Positives = 64/89 (71%)
Frame = +3 / +2
Query: 417 RYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYSSQD 596
RYL IRWG+EL + VIVGE GD+DYE L GG+HKT+ILKG FNT N++H R Y QD
Sbjct: 194 RYLSIRWGIELPDAVVIVGETGDSDYEELFGGLHKTVILKGGFNTPANRIHTVRRYPLQD 373
Query: 597 VVSFDKQGIASIEGYGPDNLKSALRQFGI 683
VV+ D I IEG+ +++SA++Q GI
Sbjct: 374 VVALDSSNIIGIEGFSTGDIRSAMQQLGI 460
>gb|CL704122.2|CL704122 SP__Bb0010P10.f SP__Bb Sorghum propinquum genomic clone
SP__Bb0010P10 5', DNA sequence
Length = 747
Score = 126 bits (269), Expect = 7e-028
Identities = 49/89 (55%), Positives = 63/89 (70%)
Frame = +3 / -2
Query: 417 RYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYSSQD 596
RYL IRWG+EL + VIVGE GD+DYE L GG+HKT+ILKG FNT N++H R Y QD
Sbjct: 572 RYLSIRWGIELPDAVVIVGETGDSDYEELFGGLHKTVILKGGFNTPANRIHTVRRYPLQD 393
Query: 597 VVSFDKQGIASIEGYGPDNLKSALRQFGI 683
V + D I IEG+ +++SA++Q GI
Sbjct: 392 VAALDSSNIIGIEGFSTGDIRSAMQQLGI 306
>gb|BE596045.1|BE596045 PI1_51_F11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 700
Score = 125 bits (267), Expect = 1e-027
Identities = 46/102 (45%), Positives = 72/102 (70%)
Frame = +3 / +1
Query: 234 DEECSSTYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQA 413
D S+ +C +F + V E+R +R++ LRCH++Y + ++L V+P+LASRSQA
Sbjct: 28 DVASSNAHCFAFLIKDPKKVKTVDEMRERLRMRGLRCHIMYCRNATRLQVVPLLASRSQA 207
Query: 414 LRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
LRYL++RWG+ + N+ +I GE GDTD E +L G+HKT+I++G
Sbjct: 208 LRYLFVRWGLSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRG 333
>gb|CW435810.1|CW435810 fsbb001f152c06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f152c06, DNA
sequence
Length = 735
Score = 73.0 bits (153), Expect(3) = 1e-025
Identities = 26/46 (56%), Positives = 39/46 (84%)
Frame = +3 / -2
Query: 294 PPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLYI 431
PP+KE+R+ MRIQ+LRC+ LY+H ++L+V+P+ ASRSQALR+ +
Sbjct: 278 PPLKELRKLMRIQSLRCNALYNHSATRLSVVPIHASRSQALRFAIV 141
Score = 59.3 bits (123), Expect(3) = 1e-025
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = +3 / -2
Query: 69 SSSEDMLNPAELPFMIDLDYHSQIEYRWGGEGLRKTLIRWAAEKNKERGQ 218
S S + N +++ F +D ++ S IEYRWGGEGLRK L++WA + +G+
Sbjct: 638 SYSGETPNNSKITFALDQNHQSHIEYRWGGEGLRKYLVKWATSVVERKGR 489
Score = 28.1 bits (55), Expect(3) = 1e-025
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3 / -2
Query: 3 GIEASXFXAFICNXXXDLXXPSSSSE 80
G+ + F AFICN ++ PS S E
Sbjct: 701 GMLPTDFDAFICNSGSNIYYPSYSGE 624
>gb|BG465821.1|BG465821 RHIZ2_45_A04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 499
Score = 113 bits (241), Expect(2) = 2e-025
Identities = 46/52 (88%), Positives = 48/52 (92%)
Frame = +2 / +1
Query: 551 CSKPSSC*QKLFIPRCCIL*QTRNCFN*GIWSRQSKVSSTAIWYIERLNL*S 706
CSKPS C*QKLFIPRCCI *+TRNCFN*GIWSRQSK+S AIWYIERLNL*S
Sbjct: 1 CSKPSPC*QKLFIPRCCIP*ETRNCFN*GIWSRQSKISFKAIWYIERLNL*S 156
Score = 110 bits (235), Expect(2) = 5e-024
Identities = 47/52 (90%), Positives = 48/52 (92%)
Frame = +3 / +2
Query: 552 APNQVHANRSYSSQDVVSFDKQGIASIEGYGPDNLKSALRQFGILKD*IFDL 707
APNQVH NRSYS QDVVS +KQGIASIEGYGPDNLKSALRQFGI KD*IFDL
Sbjct: 2 APNQVHVNRSYSFQDVVSLEKQGIASIEGYGPDNLKSALRQFGISKD*IFDL 157
Score = 109 bits (233), Expect(2) = 4e-024
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = -3 / -2
Query: 706 RSKI*SFNIPNCRRADFRLSGPYPSIEAIPCLSKDTTSWDE*LLLA*TWFGA 551
RSKI*SF+IPNC +ADFRLSGPYPSIEAIPC S+DTTSW+E*LLL TWFGA
Sbjct: 156 RSKI*SFDIPNCLKADFRLSGPYPSIEAIPCFSRDTTSWNE*LLLTWTWFGA 1
Score = 108 bits (230), Expect(2) = 1e-023
Identities = 45/52 (86%), Positives = 48/52 (92%)
Frame = -1 / -3
Query: 708 KDQRFSLSIYQIAVELTLDCLDHIPQLKQFLVCQRIQHLGMNSFC*HELGLE 553
+DQRFSLSIYQIA++L LDCLDHIPQLKQFLV Q IQHLGMNSFC*H LGLE
Sbjct: 158 QDQRFSLSIYQIALKLILDCLDHIPQLKQFLVSQGIQHLGMNSFC*HGLGLE 3
Score = 24.4 bits (47), Expect(2) = 2e-025
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 709 AGQQRNQSRYRET 747
AGQQRNQ+R E+
Sbjct: 158 AGQQRNQTRIEES 196
Score = 23.5 bits (45), Expect(2) = 1e-023
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / -1
Query: 735 PALIPLLTSK 706
P+LIPLLTSK
Sbjct: 184 PSLIPLLTSK 155
Score = 23.5 bits (45), Expect(2) = 4e-024
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / -2
Query: 746 VSRYLL*FLC*PAKIK 699
+S L+*FLC*PA+ K
Sbjct: 195 LSSILV*FLC*PARSK 148
Score = 22.1 bits (42), Expect(2) = 5e-024
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / +1
Query: 708 CWSAEES 728
CWSAEES
Sbjct: 157 CWSAEES 177
>gb|AW678428.1|AW678428 WS1_15_B04.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 458
Score = 112 bits (239), Expect(2) = 3e-025
Identities = 48/52 (92%), Positives = 49/52 (94%)
Frame = +3 / +3
Query: 552 APNQVHANRSYSSQDVVSFDKQGIASIEGYGPDNLKSALRQFGILKD*IFDL 707
APNQVHANRSYS QDVVS +KQGIASIEGYGPDNLKSALRQFGI KD*IFDL
Sbjct: 3 APNQVHANRSYSFQDVVSLEKQGIASIEGYGPDNLKSALRQFGISKD*IFDL 158
Score = 110 bits (235), Expect(2) = 5e-024
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = +2 / +2
Query: 551 CSKPSSC*QKLFIPRCCIL*QTRNCFN*GIWSRQSKVSSTAIWYIERLNL*S 706
CSKPS C*QKLFIPRCCI *+TRNCFN*GIWSRQ K+S AIWYIERLNL*S
Sbjct: 2 CSKPSPC*QKLFIPRCCIP*ETRNCFN*GIWSRQFKISFKAIWYIERLNL*S 157
Score = 110 bits (234), Expect(2) = 3e-024
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = -3 / -2
Query: 706 RSKI*SFNIPNCRRADFRLSGPYPSIEAIPCLSKDTTSWDE*LLLA*TWFGA 551
RSKI*SF+IPNC +ADF+LSGPYPSIEAIPC S+DTTSW+E*LLLA TWFGA
Sbjct: 157 RSKI*SFDIPNCLKADFKLSGPYPSIEAIPCFSRDTTSWNE*LLLAWTWFGA 2
Score = 108 bits (230), Expect(2) = 1e-023
Identities = 45/53 (84%), Positives = 49/53 (92%)
Frame = -1 / -3
Query: 708 KDQRFSLSIYQIAVELTLDCLDHIPQLKQFLVCQRIQHLGMNSFC*HELGLEQ 550
+DQRFSLSIYQIA++L L+CLDHIPQLKQFLV Q IQHLGMNSFC*H LGLEQ
Sbjct: 159 QDQRFSLSIYQIALKLILNCLDHIPQLKQFLVSQGIQHLGMNSFC*HGLGLEQ 1
Score = 103 bits (219), Expect = 5e-021
Identities = 47/53 (88%), Positives = 51/53 (96%)
Frame = -2 / -1
Query: 710 AKIKDLVFQYTKLP*S*L*IVWTISLN*SNSLFVKGYNILG*IASVSMNLVWS 552
+KIKDLVF+YTKLP*S* *IVWTISLN*SNSLF+KGYNIL *IASVSM+LVWS
Sbjct: 161 SKIKDLVFRYTKLP*S*F*IVWTISLN*SNSLFLKGYNILE*IASVSMDLVWS 3
Score = 24.4 bits (47), Expect(2) = 3e-025
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 709 AGQQRNQSRYRET 747
AGQQRNQ+R E+
Sbjct: 159 AGQQRNQTRIEES 197
Score = 23.5 bits (45), Expect(2) = 1e-023
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / -1
Query: 735 PALIPLLTSK 706
P+LIPLLTSK
Sbjct: 185 PSLIPLLTSK 156
Score = 23.5 bits (45), Expect(2) = 3e-024
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / -2
Query: 746 VSRYLL*FLC*PAKIK 699
+S L+*FLC*PA+ K
Sbjct: 196 LSSILV*FLC*PARSK 149
Score = 22.1 bits (42), Expect(2) = 5e-024
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / +2
Query: 708 CWSAEES 728
CWSAEES
Sbjct: 158 CWSAEES 178
>gb|AW678429.1|AW678429 WS1_15_B03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 451
Score = 110 bits (235), Expect(2) = 1e-024
Identities = 47/51 (92%), Positives = 48/51 (94%)
Frame = +3 / +3
Query: 555 PNQVHANRSYSSQDVVSFDKQGIASIEGYGPDNLKSALRQFGILKD*IFDL 707
PNQVHANRSYS QDVVS +KQGIASIEGYGPDNLKSALRQFGI KD*IFDL
Sbjct: 3 PNQVHANRSYSFQDVVSLEKQGIASIEGYGPDNLKSALRQFGISKD*IFDL 155
Score = 108 bits (230), Expect(2) = 1e-023
Identities = 43/51 (84%), Positives = 48/51 (94%)
Frame = -3 / -1
Query: 706 RSKI*SFNIPNCRRADFRLSGPYPSIEAIPCLSKDTTSWDE*LLLA*TWFG 554
RSKI*SF+IPNC +ADF+LSGPYPSIEAIPC S+DTTSW+E*LLLA TWFG
Sbjct: 154 RSKI*SFDIPNCLKADFKLSGPYPSIEAIPCFSRDTTSWNE*LLLAWTWFG 2
Score = 106 bits (226), Expect(2) = 9e-023
Identities = 44/51 (86%), Positives = 46/51 (90%)
Frame = +2 / +2
Query: 554 SKPSSC*QKLFIPRCCIL*QTRNCFN*GIWSRQSKVSSTAIWYIERLNL*S 706
SKPS C*QKLFIPRCCI *+TRNCFN*GIWSRQ K+S AIWYIERLNL*S
Sbjct: 2 SKPSPC*QKLFIPRCCIP*ETRNCFN*GIWSRQFKISFKAIWYIERLNL*S 154
Score = 105 bits (225), Expect(2) = 5e-023
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = -1 / -2
Query: 708 KDQRFSLSIYQIAVELTLDCLDHIPQLKQFLVCQRIQHLGMNSFC*HELGLE 553
+DQRFSLSIYQIA++L L+CLDHIPQLKQFLV Q IQHLGMNSFC*H LGLE
Sbjct: 156 QDQRFSLSIYQIALKLILNCLDHIPQLKQFLVSQGIQHLGMNSFC*HGLGLE 1
Score = 24.4 bits (47), Expect(2) = 1e-024
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 709 AGQQRNQSRYRET 747
AGQQRNQ+R E+
Sbjct: 156 AGQQRNQTRIEES 194
Score = 23.5 bits (45), Expect(2) = 5e-023
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / -3
Query: 735 PALIPLLTSK 706
P+LIPLLTSK
Sbjct: 182 PSLIPLLTSK 153
Score = 23.5 bits (45), Expect(2) = 1e-023
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / -1
Query: 746 VSRYLL*FLC*PAKIK 699
+S L+*FLC*PA+ K
Sbjct: 193 LSSILV*FLC*PARSK 146
Score = 22.1 bits (42), Expect(2) = 9e-023
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / +2
Query: 708 CWSAEES 728
CWSAEES
Sbjct: 155 CWSAEES 175
>gb|BZ627054.1|BZ627054 ih50a05.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih50a05 5', DNA sequence
Length = 663
Score = 100 bits (213), Expect(2) = 5e-024
Identities = 38/73 (52%), Positives = 52/73 (71%)
Frame = +3 / -1
Query: 465 IVGECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYSSQDVVSFDKQGIASIEGYG 644
++GE GD+DYE L GG+HKT+ILKG FNT N++H R Y QDVV+ D I IEG+
Sbjct: 615 LLGETGDSDYEELFGGLHKTVILKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFS 436
Query: 645 PDNLKSALRQFGI 683
+++SA++Q GI
Sbjct: 435 TGDIRSAMQQLGI 397
Score = 32.2 bits (64), Expect(2) = 5e-024
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 420 YLYIRWGVELSNITVIVG 473
YL IRWG+EL + VIVG
Sbjct: 661 YLSIRWGIELPDAVVIVG 608
>gb|BG054057.1|BG054057 OV2_1_H05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 585
Score = 112 bits (239), Expect = 1e-023
Identities = 39/73 (53%), Positives = 60/73 (82%)
Frame = +3 / +2
Query: 321 MRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEG 500
+R++ LRCH++Y + ++L V+P+LASRSQALRYL++RWG+ + N+ +I GE GDTD E
Sbjct: 5 LRMRGLRCHIMYCRNATRLQVVPLLASRSQALRYLFVRWGLSVGNMYLITGEHGDTDLEE 184
Query: 501 LLGGVHKTIILKG 539
+L G+HKT+I++G
Sbjct: 185 MLSGLHKTVIVRG 223
>gb|BG488446.1|BG488446 RHIZ2_63_G11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 538
Score = 107 bits (229), Expect = 2e-022
Identities = 43/52 (82%), Positives = 45/52 (86%)
Frame = +3 / +1
Query: 3 GIEASXFXAFICNXXXDLXXPSSSSEDMLNPAELPFMIDLDYHSQIEYRWGG 158
GIEAS F AFICN DL PSS+SEDML+PAELPFMIDLDYHSQIEYRWGG
Sbjct: 382 GIEASDFDAFICNSGSDLCYPSSNSEDMLSPAELPFMIDLDYHSQIEYRWGG 537
Score = 105 bits (223), Expect = 2e-021
Identities = 43/52 (82%), Positives = 43/52 (82%)
Frame = -2 / -2
Query: 158 SSPAIFNLGVIIKINHEWELSRVKHVLRA*RWXXKIXXXVAYEGXKXTSFYP 3
SSPAIFNLGVIIKINHEWELSR KHVLR *RW KI VAYEG K TSFYP
Sbjct: 537 SSPAIFNLGVIIKINHEWELSRAKHVLRV*RWITKITATVAYEGVKVTSFYP 382
Score = 105 bits (223), Expect = 2e-021
Identities = 46/52 (88%), Positives = 46/52 (88%)
Frame = -1 / -1
Query: 159 LLPSDIQFGSDNQDQS*MGAQQG*ACPQSLKMDXKDXXXCCI*RXQXH*LLS 4
LLPSDIQFGSDNQDQS*MGAQQG*ACPQSLKMD KD CCI*R Q H*LLS
Sbjct: 538 LLPSDIQFGSDNQDQS*MGAQQG*ACPQSLKMDNKDHCHCCI*RRQSH*LLS 383
>gb|BM326867.1|BM326867 PIC1_4_B01.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 453
Score = 105 bits (225), Expect = 8e-022
Identities = 43/72 (59%), Positives = 52/72 (72%)
Frame = +3 / +3
Query: 471 GECGDTDYEGLLGGVHKTIILKGSFNTAPNQVHANRSYSSQDVVSFDKQGIASIEGYGPD 650
GE GD+DYE LLGG+H+TIILKG FN N++H R Y QDVV+ D I +EGY D
Sbjct: 3 GESGDSDYEELLGGLHRTIILKGEFNIPANRIHTVRRYPLQDVVALDSSNIIGVEGYTTD 182
Query: 651 NLKSALRQFGIL 686
+LKSAL+Q GIL
Sbjct: 183 DLKSALQQMGIL 218
>gb|AW672444.1|AW672444 LG1_359_C11.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 591
Score = 105 bits (223), Expect = 2e-021
Identities = 39/95 (41%), Positives = 68/95 (71%)
Frame = +3 / +3
Query: 249 STYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLY 428
S +C ++ + + V IR+++R++ RC+++Y+ ++LNVIP+ ASR +ALRYL
Sbjct: 9 SVHCHAYAVAGASKVKKVDSIRQSLRMRGFRCNLVYTRACTRLNVIPLSASRPRALRYLS 188
Query: 429 IRWGVELSNITVIVGECGDTDYEGLLGGVHKTIIL 533
I+WG++L + V+VG+ GDTD E +L G+H+T++L
Sbjct: 189 IQWGIDLDKVAVLVGDKGDTDRERVLPGLHRTLVL 293
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,133,168,465
Number of Sequences: 832831
Number of extensions: 16106225
Number of successful extensions: 66872
Number of sequences better than 1.0e-020: 40
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 32916657429
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)