TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3070703.2.1
(1214 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN123895.1|CN123895 RHOH1_1_H10.b1_A002 Acid- and alkali... 371 e-101
gb|BQ656122.1|BQ656122 pRC1119 Sorghum halepense rhizome cD... 341 5e-099
gb|CN126287.1|CN126287 RHOH1_16_F09.b1_A002 Acid- and alkal... 262 3e-091
gb|CD228332.1|CD228332 CCC1_7_D11.b1_A007 Callus culture/ce... 221 4e-079
gb|BG159292.1|BG159292 OV2_5_H06.g1_A002 Ovary 2 (OV2) Sorg... 216 1e-077
gb|BG159555.1|BG159555 OV2_5_H06.b1_A002 Ovary 2 (OV2) Sorg... 216 5e-074
gb|BE359967.1|BE359967 DG1_60_B02.g2_A002 Dark Grown 1 (DG1... 274 2e-072
gb|CN147765.1|CN147765 WOUND1_52_A01.b1_A002 Wounded leaves... 205 9e-072
gb|CD233593.1|CD233593 SS1_3_B09.b1_A012 Salt-stressed seed... 270 2e-071
gb|BG463311.1|BG463311 EM1_48_A03.g1_A002 Embryo 1 (EM1) So... 196 3e-070
gb|CW269978.1|CW269978 104_741_11402142_148_35329_025 Sorgh... 181 1e-069
gb|CN135205.1|CN135205 OX1_31_F02.b1_A002 Oxidatively-stres... 188 2e-069
gb|BG049722.1|BG049722 EM1_8_C12.g1_A002 Embryo 1 (EM1) Sor... 251 2e-065
gb|CW338169.1|CW338169 104_838_11484601_148_36127_009 Sorgh... 173 8e-065
gb|AW287265.2|AW287265 LG1_268_G06.b1_A002 Light Grown 1 (L... 245 9e-064
gb|CL190298.1|CL190298 104_408_10905986_114_32484_009 Sorgh... 114 1e-061
gb|CW338168.1|CW338168 104_838_11484601_116_36126_009 Sorgh... 131 6e-060
gb|CL160782.1|CL160782 104_351_10805235_116_31825_291 Sorgh... 111 3e-059
gb|CW352663.1|CW352663 fsbb001f015a20f0 Sorghum methylation... 114 4e-058
gb|BG739395.1|BG739395 EM1_82_D08.g1_A002 Embryo 1 (EM1) So... 208 2e-052
gb|CL172473.1|CL172473 104_375_10890187_116_31797_091 Sorgh... 120 4e-052
gb|CW400688.1|CW400688 fsbb001f091c02k0 Sorghum methylation... 109 2e-046
gb|CW352664.1|CW352664 fsbb001f015a20k0 Sorghum methylation... 99 4e-044
gb|CW109338.1|CW109338 104_481_11098049_116_34505_071 Sorgh... 99 1e-043
gb|CW445100.1|CW445100 fsbb001f170a14f0 Sorghum methylation... 121 4e-039
gb|CW087839.1|CW087839 104_432_10947865_114_32552_005 Sorgh... 111 2e-038
gb|BG356594.1|BG356594 EM1_24_E01.g1_A002 Embryo 1 (EM1) So... 156 5e-037
gb|CW249847.1|CW249847 104_711_11223065_116_35043_067 Sorgh... 99 7e-034
gb|CL160781.1|CL160781 104_351_10805235_114_31824_291 Sorgh... 142 9e-033
gb|CL172474.1|CL172474 104_375_10890187_148_31796_091 Sorgh... 105 2e-031
gb|CL190299.1|CL190299 104_408_10905986_116_32502_009 Sorgh... 70 7e-030
gb|CF489211.1|CF489211 POL1_55_A05.g1_A002 Pollen Sorghum b... 119 3e-029
gb|BG557554.1|BG557554 EM1_54_H11.b1_A002 Embryo 1 (EM1) So... 113 3e-029
gb|CW087840.1|CW087840 104_432_10947865_116_32556_005 Sorgh... 98 6e-028
gb|CN147262.1|CN147262 WOUND1_48_D07.g1_A002 Wounded leaves... 109 2e-027
gb|CD233682.1|CD233682 SS1_3_B09.g1_A012 Salt-stressed seed... 124 2e-027
gb|CW300248.1|CW300248 104_783_11463552_148_36251_088 Sorgh... 107 3e-027
gb|CD432207.1|CD432207 ETH1_26_G11.g1_A002 Ethylene-treated... 110 3e-026
gb|BG560333.1|BG560333 RHIZ2_73_B06.b1_A003 Rhizome2 (RHIZ2... 110 2e-025
gb|CN147179.1|CN147179 WOUND1_48_D07.b1_A002 Wounded leaves... 68 1e-024
gb|CX615956.1|CX615956 GABR1_25_A05.b1_A002 GA- or brassino... 66 1e-023
gb|BG560363.1|BG560363 RHIZ2_73_E06.b1_A003 Rhizome2 (RHIZ2... 110 4e-023
gb|BM325263.1|BM325263 PIC1_42_D10.b1_A002 Pathogen-infecte... 110 4e-023
gb|CN149722.1|CN149722 WOUND1_64_B06.g1_A002 Wounded leaves... 110 4e-023
gb|CD207582.1|CD207582 HS1_33_C08.g1_A012 Heat-shocked seed... 109 1e-022
gb|CD208040.1|CD208040 HS1_36_D12.g1_A012 Heat-shocked seed... 109 1e-022
gb|CF427115.1|CF427115 PH1_3_F11.g1_A002 Phosphorous-defici... 109 1e-022
gb|AW284262.1|AW284262 LG1_268_G06.g1_A002 Light Grown 1 (L... 107 3e-022
gb|CD204270.1|CD204270 HS1_4_G11.g1_A012 Heat-shocked seedl... 107 3e-022
gb|CX620652.1|CX620652 GABR1_53_D12.b1_A002 GA- or brassino... 66 5e-022
gb|CN149638.1|CN149638 WOUND1_64_B06.b1_A002 Wounded leaves... 61 7e-022
gb|CB928908.1|CB928908 ABA1_38_A08.b1_A012 Abscisic acid-tr... 66 2e-021
gb|BG649669.1|BG649669 RHIZ2_82_B11.b1_A003 Rhizome2 (RHIZ2... 84 5e-021
>gb|CN123895.1|CN123895 RHOH1_1_H10.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_1_H10_A002 3', mRNA sequence
Length = 747
Score = 371 bits (804), Expect = e-101
Identities = 146/174 (83%), Positives = 164/174 (94%)
Frame = -1 / +3
Query: 848 KQSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDY 669
K ++MAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALG+IPGLKV+GTDY
Sbjct: 9 KGADMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDY 188
Query: 668 STADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQGRSVTEFVEACKKATGAS 489
TADGTC+RDYIDVTDLVDAHVKAL KA+P KVGIYNVGTG+GRSV EFV+ACKKATG +
Sbjct: 189 PTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVN 368
Query: 488 IKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLAQAWKWQKAHPNGY 327
IK+EYL+RRPGDYAEVYSDP+KI +LNWTAQYTDL +SL+ AW+WQK+HP+GY
Sbjct: 369 IKIEYLSRRPGDYAEVYSDPTKINKELNWTAQYTDLKESLSVAWRWQKSHPHGY 530
Score = 275 bits (595), Expect = 9e-073
Identities = 128/169 (75%), Positives = 139/169 (82%)
Frame = +1 / -3
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P GC FCH HA RL RSVY AVQL S+ IF GSLYTSA*SPGL RYS L+ PVAFL
Sbjct: 526 PCGCDFCHLHATDRLSLRSVY*AVQLSSLLIFVGSLYTSA*SPGLLLRYSILMLTPVAFL 347
Query: 511 QASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTF 690
QASTNS+T+ P PVPTL*+PT G AL AFT*AST+SVTS+*SL QVPSAV *SVP TF
Sbjct: 346 QASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLTF 167
Query: 691 SPGMIPKAASKQAPDIRPCSRSSGLGASPSRPSGSDPITLKYLKIMTAI 837
+PGM P AASK APDIRPCSRSSGLGASP+ PSGS+PITLKYLKIMTA+
Sbjct: 166 NPGMTPNAASKHAPDIRPCSRSSGLGASPNLPSGSEPITLKYLKIMTAM 20
Score = 169 bits (364), Expect = 7e-041
Identities = 79/171 (46%), Positives = 116/171 (67%)
Frame = +3 / -2
Query: 327 ISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCL 506
++VR+RLLP P +AL +I +L CPVE+ D IAVY IIS + ++F+ D + C
Sbjct: 530 VAVRMRLLPPPCD*QALFEIGILSCPVELLVDLCWIAVYFCIISWPSAEVFNFDVNPSCF 351
Query: 507 LASFYKLSH*STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTN 686
LA KL + +T +CS+IV+++F+ L + F++SI ICDI+++S A SI G+I S N
Sbjct: 350 LAGINKLINRATSSCSNIVNADFSRLCLVECFHMSIN*ICDINIISYAGSISCGIICSFN 171
Query: 687 L*PWNDSQSCIKASTGYPSMLA*LWPWSFS*PSLWV*SNHVEVS*DHDSHI 839
L WNDS CI+A YP+ML+ WP S +* SL V +N++E+S*+HDSH+
Sbjct: 170 LQSWNDS*CCIEACPRYPTMLSEFWPRSLT*SSLRVRANNIEIS*NHDSHV 18
>gb|BQ656122.1|BQ656122 pRC1119 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC1119, mRNA sequence
Length = 862
Score = 341 bits (738), Expect(3) = 5e-099
Identities = 132/160 (82%), Positives = 150/160 (93%)
Frame = -1 / +1
Query: 806 VIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDYSTADGTCVRDYIDV 627
++ SDPEGRLGEAPRPELREHGRISGACFDAALG+IPGLKV+GTDY TADGTC+RDYIDV
Sbjct: 91 LLASDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRDYIDV 270
Query: 626 TDLVDAHVKALGKAQPGKVGIYNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYA 447
TDLVDAHVKAL KA+P KVGIYNVGTG+GRSV EFV+ACKKATG +IK+EYL+RRPGDYA
Sbjct: 271 TDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLSRRPGDYA 450
Query: 446 EVYSDPSKILMDLNWTAQYTDLGQSLAQAWKWQKAHPNGY 327
EVYSDP+KI +LNWTAQYTDL +SL+ AW+WQK+HP+GY
Sbjct: 451 EVYSDPTKINKELNWTAQYTDLKESLSVAWRWQKSHPHGY 570
Score = 248 bits (535), Expect(3) = 6e-072
Identities = 116/156 (74%), Positives = 126/156 (80%)
Frame = +1 / -3
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P GC FCH HA RL RSVY AVQL S+ IF GSLYTSA*SPGL RYS L+ PVAFL
Sbjct: 566 PCGCDFCHLHATDRLSLRSVY*AVQLSSLLIFVGSLYTSA*SPGLLLRYSILMLTPVAFL 387
Query: 511 QASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTF 690
QASTNS+T+ P PVPTL*+PT G AL AFT*AST+SVTS+*SL QVPSAV *SVP TF
Sbjct: 386 QASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLTF 207
Query: 691 SPGMIPKAASKQAPDIRPCSRSSGLGASPSRPSGSD 798
+PGM P AASK APDIRPCSRSSGLGASP+ PSGS+
Sbjct: 206 NPGMTPNAASKHAPDIRPCSRSSGLGASPNLPSGSE 99
Score = 146 bits (314), Expect(2) = 3e-036
Identities = 71/156 (45%), Positives = 102/156 (65%)
Frame = +3 / -2
Query: 327 ISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCL 506
++VR+RLLP P +AL +I +L CPVE+ D IAVY IIS + ++F+ D + C
Sbjct: 570 VAVRMRLLPPPCD*QALFEIGILSCPVELLVDLCWIAVYFCIISWPSAEVFNFDVNPSCF 391
Query: 507 LASFYKLSH*STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTN 686
LA KL + +T +CS+IV+++F+ L + F++SI ICDI+++S A SI G+I S N
Sbjct: 390 LAGINKLINRATSSCSNIVNADFSRLCLVECFHMSIN*ICDINIISYAGSISCGIICSFN 211
Query: 687 L*PWNDSQSCIKASTGYPSMLA*LWPWSFS*PSLWV 794
L WNDS CI+A YP+ML+ WP S +* SL V
Sbjct: 210 LQSWNDS*CCIEACPRYPTMLSEFWPRSLT*SSLRV 103
Score = 62.9 bits (131), Expect(3) = 7e-024
Identities = 36/83 (43%), Positives = 46/83 (55%)
Frame = -3 / +3
Query: 564 LQCRNRPR*ISD*VCRSLQEGNGSFYQGRISCP*TWRLCRGIQRSVENPHGPQLDSPIHG 385
LQC NR R + *VC LQE N +Q I RLCR IQRS ++ G QLDS I+
Sbjct: 333 LQCWNRKRSLG**VC*CLQESNWG*HQN*IPQQKARRLCRSIQRSNKDQQGAQLDSSIYR 512
Query: 384 SWPKPCPGVEMAEGAPERICVSL 316
S +P +E+A+ A R+ L
Sbjct: 513 SQREPVSRMEVAKVASARLRAKL 581
Score = 46.4 bits (95), Expect(3) = 7e-024
Identities = 30/58 (51%), Positives = 33/58 (56%)
Frame = -2 / +2
Query: 793 TQRDG*EKLQGQSYASMDGYPVLALMQLWESFQG*RFVEPITPLQMELALETTSMSQI 620
T R+ * +L GQ+ SM GY A MQ ESFQ *R E I P ME A E MSQI
Sbjct: 104 TLRED*VRLLGQNSESMVGYLGHASMQH*ESFQD*RLKEQIIPQLMEPA*EIILMSQI 277
Score = 40.9 bits (83), Expect(3) = 7e-024
Identities = 16/28 (57%), Positives = 24/28 (85%)
Frame = -1 / +3
Query: 860 TKSKKQSNMAVMILRYFNVIGSDPEGRL 777
++S+++ +MAVMILRYFNVIG P G++
Sbjct: 36 SQSRREPDMAVMILRYFNVIGL*P*GKI 119
Score = 36.3 bits (73), Expect(3) = 5e-099
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -1 / +2
Query: 896 AKKMAEDIILDFTKSK 849
AKKMAEDIILDF+KSK
Sbjct: 2 AKKMAEDIILDFSKSK 49
Score = 35.4 bits (71), Expect(3) = 6e-072
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1 / -1
Query: 784 PSGSDPITLKYLKIMTAI 837
P G PITLKYLKIMTA+
Sbjct: 112 PQGQRPITLKYLKIMTAM 59
Score = 29.0 bits (57), Expect(3) = 6e-072
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1 / -2
Query: 850 FDFVKSKMMSSAIFFA 897
FDF KS M+SSAIF A
Sbjct: 48 FDFEKSNMISSAIFLA 1
Score = 27.6 bits (54), Expect(2) = 3e-036
Identities = 8/14 (57%), Positives = 14/14 (100%)
Frame = +3 / -3
Query: 798 SNHVEVS*DHDSHI 839
+N++E+S*+HDSH+
Sbjct: 98 ANNIEIS*NHDSHV 57
Score = 25.8 bits (50), Expect(3) = 5e-099
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3 / +2
Query: 837 YGCHDLKILQRDW 799
+GCHD KI Q W
Sbjct: 59 HGCHDFKIFQCYW 97
>gb|CN126287.1|CN126287 RHOH1_16_F09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_16_F09_A002 3', mRNA sequence
Length = 812
Score = 262 bits (567), Expect(5) = 3e-091
Identities = 106/117 (90%), Positives = 111/117 (94%)
Frame = -1 / +2
Query: 647 VRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQGRSVTEFVEACKKATGASIKVEYLA 468
+RDYIDVTDLVDAHVKALGKA+PGKVGIYNVGTGQGRSV EFV+AC KATGASIKVEYLA
Sbjct: 2 IRDYIDVTDLVDAHVKALGKAEPGKVGIYNVGTGQGRSVNEFVKACMKATGASIKVEYLA 181
Query: 467 RRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLAQAWKWQKAHPNGYASA*FRAQKV 297
RRPGDYAEVYSDPSKI DLNWTAQYTDLGQSLAQAWKWQKAHPNGY SA*FR Q++
Sbjct: 182 RRPGDYAEVYSDPSKIYKDLNWTAQYTDLGQSLAQAWKWQKAHPNGYGSA*FRVQRL 352
Score = 237 bits (513), Expect(4) = 1e-080
Identities = 102/114 (89%), Positives = 105/114 (92%)
Frame = +1 / -3
Query: 304 *ALNQADAYPFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYST 483
* LNQAD YPFGCAFCHFHAWARLWPRSVYWAVQLRS+ IFDGSLYTSA*SPGLRARYST
Sbjct: 345 *TLNQADPYPFGCAFCHFHAWARLWPRSVYWAVQLRSL*IFDGSLYTSA*SPGLRARYST 166
Query: 484 LIEAPVAFLQASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SL 645
L+EAPVAF+QA TNS TDLP PVPTL*IPTLPG ALPRA T ASTRSVTSM*SL
Sbjct: 165 LMEAPVAFMQAFTNSFTDLPCPVPTL*IPTLPGSALPRALTWASTRSVTSM*SL 4
Score = 193 bits (415), Expect(4) = 1e-064
Identities = 88/110 (80%), Positives = 92/110 (83%)
Frame = +3 / -2
Query: 318 G*RISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSS 497
G* ISV VR LPFP LGKALAKI VLGCPVEV DFR I VYL IIS STGKIF+LD SS
Sbjct: 331 G*SISVWVRFLPFPCLGKALAKISVLGCPVEVLVDFRWITVYLSIISGSTGKIFNLDGSS 152
Query: 498 RCLLASFYKLSH*STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSN 647
CL ASF+KL H*STL+CSDIVDSNFAWLSFTKSF + IYKICDIDVV N
Sbjct: 151 CCLHASFHKLIH*STLSCSDIVDSNFAWLSFTKSFDMGIYKICDIDVVPN 2
Score = 161 bits (347), Expect(4) = 2e-055
Identities = 69/88 (78%), Positives = 75/88 (85%)
Frame = -3 / +1
Query: 564 LQCRNRPR*ISD*VCRSLQEGNGSFYQGRISCP*TWRLCRGIQRSVENPHGPQLDSPIHG 385
LQCRNR R*IS+*VC SL EGN SF+QG ISCP*T RLC GIQ S+EN GPQLDSPIH
Sbjct: 85 LQCRNRTR*ISE*VCESLHEGNRSFHQG*ISCP*TRRLC*GIQ*SIENLQGPQLDSPIH* 264
Query: 384 SWPKPCPGVEMAEGAPERICVSLIQSSK 301
SWPKPCPG+EMAE AP+RI +SLIQSSK
Sbjct: 265 SWPKPCPGMEMAESAPKRIWISLIQSSK 348
Score = 146 bits (314), Expect(3) = 4e-044
Identities = 78/115 (67%), Positives = 81/115 (70%)
Frame = -2 / +3
Query: 646 LETTSMSQIXXXXXXXXXXXLSQAKLESTMSEQAKVDQ*LSL*KLARRQRELLSRSNILP 467
L TTSMSQI LSQAKLESTMSEQ KVDQ*+SL*KLA RQ+EL SR NILP
Sbjct: 3 LGTTSMSQIL*MPMSKLLVKLSQAKLESTMSEQDKVDQ*MSL*KLA*RQQELPSRLNILP 182
Query: 466 VDLEIMPRYTAIRRKSSWTSTGQPNTRILAKALPXXXXXXXXXXTDMRQPDSELK 302
VD EIM RYT I RKS+ TSTGQPNT ILAKALP TDM QPDSE K
Sbjct: 183 VDPEIMLRYTVIHRKSTRTSTGQPNTLILAKALPRHGNGRKRTQTDMDQPDSEFK 347
Score = 111 bits (238), Expect(5) = 7e-054
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = +2 / -1
Query: 302 FEL*IRLTHIRSGAPSAISTPGQGFGQDPCIGLSS*GP*GFSTDRCIPRHNLQVYGQDIR 481
FEL*IRL HIR GA SAIS PGQGFGQD CIGLSS*GP FS D CIP+HNL+VYGQDI+
Sbjct: 347 FEL*IRLIHIRLGALSAISMPGQGFGQDQCIGLSS*GPCRFSMDHCIPQHNLRVYGQDIQ 168
Score = 82.6 bits (174), Expect(5) = 7e-054
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +2 / -1
Query: 521 QTQSLIYLGLFRHCRFQLCLAELYQELLREHLQDL*HRCS 640
QT SLIYL LFRHCRFQLCLA+LYQEL HLQDL*HRCS
Sbjct: 128 QTHSLIYLVLFRHCRFQLCLAQLYQEL*HGHLQDL*HRCS 9
Score = 68.4 bits (143), Expect(5) = 3e-091
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -3 / +1
Query: 201 QQQQKSRDSFIAELEEDKSIAGRIHYLFLD*FHLY 97
+QQ KSRDSFIA LEEDKSI R+HYLFLD*FH+Y
Sbjct: 436 KQQHKSRDSFIAVLEEDKSITERMHYLFLD*FHIY 540
Score = 67.0 bits (140), Expect(4) = 2e-055
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = -2 / +3
Query: 199 TATEES*FFYCRAGRRQEYRRENTLPVP*LVSFI 98
TAT++S*FFYC AGRRQ+Y REN LPVP*LVS+I
Sbjct: 438 TATQKS*FFYCSAGRRQKYHRENALPVP*LVSYI 539
Score = 63.8 bits (133), Expect(4) = 1e-080
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +3 / -2
Query: 96 HINETNQGTGSVFSLRYSCLLPALQ*KNHDSSVAV 200
+I ETNQGTGS FSL Y CLLPALQ*KNHD VAV
Sbjct: 541 YIYETNQGTGSAFSL*YFCLLPALQ*KNHDFCVAV 437
Score = 58.3 bits (121), Expect(4) = 1e-064
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1 / -3
Query: 103 MKLIKEQVVYSPCDTLVFFQLCNKRITT 186
MKLIKEQVV+S CDT VFFQ CNKRITT
Sbjct: 534 MKLIKEQVVHSLCDTFVFFQHCNKRITT 451
Score = 55.6 bits (115), Expect(3) = 4e-044
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = -1 / +2
Query: 179 ILLLQSWKKTRVSQGEYTTCSLISFIYM 96
ILLLQ WKKT+VSQ E TTCSLISFIY+
Sbjct: 458 ILLLQCWKKTKVSQRECTTCSLISFIYI 541
Score = 47.3 bits (97), Expect(5) = 7e-054
Identities = 21/38 (55%), Positives = 21/38 (55%)
Frame = +2 / -1
Query: 98 YK*N*SRNR*CILPXXXXXXXXXXXKESRLFCCCCYVF 211
Y *N*SRNR*CIL KESRL CCC F
Sbjct: 539 YI*N*SRNR*CILSVILLSSSSTAIKESRLLCCCLLCF 426
Score = 30.4 bits (60), Expect(5) = 3e-091
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / +2
Query: 112 LVSFICIGPLFVGVILVQF 56
L+SFI IGPLFV IL+ F
Sbjct: 521 LISFIYIGPLFVVDILIYF 577
Score = 29.9 bits (59), Expect(4) = 1e-080
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2 / -2
Query: 188 FCCCCYVFSMVKNQSSEGYI 247
FC SM+KNQ SEGYI
Sbjct: 451 FCVAVCYVSMLKNQLSEGYI 392
Score = 29.0 bits (57), Expect(5) = 3e-091
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / +3
Query: 246 I*PSDDWFFTIEKT*QQQQKS 184
I*PSD+WFF IE QKS
Sbjct: 393 I*PSDNWFFNIET*QTATQKS 455
Score = 28.6 bits (56), Expect(4) = 1e-064
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2 / -2
Query: 56 KLY*NDTNEKRTYTYK*N 109
K+Y*N N+KRTY Y+ N
Sbjct: 577 KIY*NVNNKKRTYIYETN 524
Score = 28.6 bits (56), Expect(4) = 1e-080
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1 / -1
Query: 40 CVLLNQIVLK*HQRKEDLYI* 102
C+ +Q +LK Q+KEDLYI*
Sbjct: 593 CLSTHQNILKCQQQKEDLYI* 531
Score = 26.3 bits (51), Expect(4) = 1e-064
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -1
Query: 211 FYGEEPIV*RLY 246
FY EEPI+*RLY
Sbjct: 428 FYVEEPII*RLY 393
Score = 23.5 bits (45), Expect(4) = 2e-055
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -3 / +3
Query: 99 YV*VLFSLVSF*YNLV 52
Y+*VLF L++F*Y L+
Sbjct: 534 YI*VLFLLLTF*YILM 581
Score = 23.5 bits (45), Expect(5) = 3e-091
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / +3
Query: 303 KG*ETHHSD 277
KG*ETHH+D
Sbjct: 345 KG*ETHHAD 371
Score = 23.5 bits (45), Expect(5) = 7e-054
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +3 / -3
Query: 66 KMTPTKRGPIHI 101
KM+ TKRGPI++
Sbjct: 567 KMSTTKRGPIYM 532
Score = 22.6 bits (43), Expect(4) = 2e-055
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1 / +1
Query: 311 RAQKVERLITQI 276
++ KVERLITQI
Sbjct: 337 QSSKVERLITQI 372
Score = 22.1 bits (42), Expect(5) = 7e-054
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3 / -3
Query: 192 VAVATFFLW*RTNRLKAI 245
V + FL *RTN LKAI
Sbjct: 447 VLLFAMFLC*RTNYLKAI 394
Score = 21.7 bits (41), Expect(3) = 4e-044
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +2
Query: 247 NIAFRRLVLHHR 212
+IAFR LVL HR
Sbjct: 392 DIAFR*LVLQHR 427
>gb|CD228332.1|CD228332 CCC1_7_D11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_7_D11_A007 3', mRNA sequence
Length = 641
Score = 221 bits (478), Expect(5) = 4e-079
Identities = 89/99 (89%), Positives = 93/99 (93%)
Frame = -1 / +2
Query: 593 GKAQPGKVGIYNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILM 414
GKA+PGKVGIYNVGTGQGRSV EFV+AC KATGASIKVEYLARRPGDYAEVYSDPSKI
Sbjct: 2 GKAEPGKVGIYNVGTGQGRSVNEFVKACMKATGASIKVEYLARRPGDYAEVYSDPSKIYK 181
Query: 413 DLNWTAQYTDLGQSLAQAWKWQKAHPNGYASA*FRAQKV 297
DLNWTAQYTDLGQSLAQAWKWQKAHPNGY SA*FR Q++
Sbjct: 182 DLNWTAQYTDLGQSLAQAWKWQKAHPNGYGSA*FRVQRL 298
Score = 210 bits (454), Expect(4) = 1e-072
Identities = 87/97 (89%), Positives = 90/97 (92%)
Frame = +1 / -3
Query: 304 *ALNQADAYPFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYST 483
* LNQAD YPFGCAFCHFHAWARLWPRSVYWAVQLRS+ IFDGSLYTSA*SPGLRARYST
Sbjct: 291 *TLNQADPYPFGCAFCHFHAWARLWPRSVYWAVQLRSL*IFDGSLYTSA*SPGLRARYST 112
Query: 484 LIEAPVAFLQASTNSVTDLPWPVPTL*IPTLPG*ALP 594
L+EAPVAF+QA TNS TDLP PVPTL*IPTLPG ALP
Sbjct: 111 LMEAPVAFMQAFTNSFTDLPCPVPTL*IPTLPGSALP 1
Score = 161 bits (347), Expect(4) = 2e-055
Identities = 69/88 (78%), Positives = 75/88 (85%)
Frame = -3 / +1
Query: 564 LQCRNRPR*ISD*VCRSLQEGNGSFYQGRISCP*TWRLCRGIQRSVENPHGPQLDSPIHG 385
LQCRNR R*IS+*VC SL EGN SF+QG ISCP*T RLC GIQ S+EN GPQLDSPIH
Sbjct: 31 LQCRNRTR*ISE*VCESLHEGNRSFHQG*ISCP*TRRLC*GIQ*SIENLQGPQLDSPIH* 210
Query: 384 SWPKPCPGVEMAEGAPERICVSLIQSSK 301
SWPKPCPG+EMAE AP+RI +SLIQSSK
Sbjct: 211 SWPKPCPGMEMAESAPKRIWISLIQSSK 294
Score = 160 bits (344), Expect(4) = 5e-055
Identities = 74/92 (80%), Positives = 77/92 (83%)
Frame = +3 / -2
Query: 318 G*RISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSS 497
G* ISV VR LPFP LGKALAKI VLGCPVEV DFR I VYL IIS STGKIF+LD SS
Sbjct: 277 G*SISVWVRFLPFPCLGKALAKISVLGCPVEVLVDFRWITVYLSIISGSTGKIFNLDGSS 98
Query: 498 RCLLASFYKLSH*STLACSDIVDSNFAWLSFT 593
CL ASF+KL H*STL+CSDIVDSNFAWLSFT
Sbjct: 97 CCLHASFHKLIH*STLSCSDIVDSNFAWLSFT 2
Score = 138 bits (295), Expect(3) = 9e-042
Identities = 69/94 (73%), Positives = 72/94 (76%)
Frame = -2 / +3
Query: 583 SQAKLESTMSEQAKVDQ*LSL*KLARRQRELLSRSNILPVDLEIMPRYTAIRRKSSWTST 404
SQAKLESTMSEQ KVDQ*+SL*KLA RQ+EL SR NILPVD EIM RYT I RKS+ TST
Sbjct: 12 SQAKLESTMSEQDKVDQ*MSL*KLA*RQQELPSRLNILPVDPEIMLRYTVIHRKSTRTST 191
Query: 403 GQPNTRILAKALPXXXXXXXXXXTDMRQPDSELK 302
GQPNT ILAKALP TDM QPDSE K
Sbjct: 192 GQPNTLILAKALPRHGNGRKRTQTDMDQPDSEFK 293
Score = 111 bits (238), Expect(5) = 1e-045
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = +2 / -1
Query: 302 FEL*IRLTHIRSGAPSAISTPGQGFGQDPCIGLSS*GP*GFSTDRCIPRHNLQVYGQDIR 481
FEL*IRL HIR GA SAIS PGQGFGQD CIGLSS*GP FS D CIP+HNL+VYGQDI+
Sbjct: 293 FEL*IRLIHIRLGALSAISMPGQGFGQDQCIGLSS*GPCRFSMDHCIPQHNLRVYGQDIQ 114
Score = 68.4 bits (143), Expect(5) = 4e-079
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -3 / +1
Query: 201 QQQQKSRDSFIAELEEDKSIAGRIHYLFLD*FHLY 97
+QQ KSRDSFIA LEEDKSI R+HYLFLD*FH+Y
Sbjct: 382 KQQHKSRDSFIAVLEEDKSITERMHYLFLD*FHIY 486
Score = 67.0 bits (140), Expect(4) = 2e-055
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = -2 / +3
Query: 199 TATEES*FFYCRAGRRQEYRRENTLPVP*LVSFI 98
TAT++S*FFYC AGRRQ+Y REN LPVP*LVS+I
Sbjct: 384 TATQKS*FFYCSAGRRQKYHRENALPVP*LVSYI 485
Score = 63.8 bits (133), Expect(4) = 1e-072
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +3 / -2
Query: 96 HINETNQGTGSVFSLRYSCLLPALQ*KNHDSSVAV 200
+I ETNQGTGS FSL Y CLLPALQ*KNHD VAV
Sbjct: 487 YIYETNQGTGSAFSL*YFCLLPALQ*KNHDFCVAV 383
Score = 58.3 bits (121), Expect(4) = 5e-055
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1 / -3
Query: 103 MKLIKEQVVYSPCDTLVFFQLCNKRITT 186
MKLIKEQVV+S CDT VFFQ CNKRITT
Sbjct: 480 MKLIKEQVVHSLCDTFVFFQHCNKRITT 397
Score = 55.6 bits (115), Expect(3) = 9e-042
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = -1 / +2
Query: 179 ILLLQSWKKTRVSQGEYTTCSLISFIYM 96
ILLLQ WKKT+VSQ E TTCSLISFIY+
Sbjct: 404 ILLLQCWKKTKVSQRECTTCSLISFIYI 487
Score = 54.2 bits (112), Expect(5) = 1e-045
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +2 / -1
Query: 521 QTQSLIYLGLFRHCRFQLCLAELY 592
QT SLIYL LFRHCRFQLCLA+LY
Sbjct: 74 QTHSLIYLVLFRHCRFQLCLAQLY 3
Score = 47.3 bits (97), Expect(5) = 1e-045
Identities = 21/38 (55%), Positives = 21/38 (55%)
Frame = +2 / -1
Query: 98 YK*N*SRNR*CILPXXXXXXXXXXXKESRLFCCCCYVF 211
Y *N*SRNR*CIL KESRL CCC F
Sbjct: 485 YI*N*SRNR*CILSVILLSSSSTAIKESRLLCCCLLCF 372
Score = 30.4 bits (60), Expect(5) = 4e-079
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / +2
Query: 112 LVSFICIGPLFVGVILVQF 56
L+SFI IGPLFV IL+ F
Sbjct: 467 LISFIYIGPLFVVDILIYF 523
Score = 29.9 bits (59), Expect(4) = 1e-072
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2 / -2
Query: 188 FCCCCYVFSMVKNQSSEGYI 247
FC SM+KNQ SEGYI
Sbjct: 397 FCVAVCYVSMLKNQLSEGYI 338
Score = 29.0 bits (57), Expect(5) = 4e-079
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / +3
Query: 246 I*PSDDWFFTIEKT*QQQQKS 184
I*PSD+WFF IE QKS
Sbjct: 339 I*PSDNWFFNIET*QTATQKS 401
Score = 28.6 bits (56), Expect(4) = 5e-055
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2 / -2
Query: 56 KLY*NDTNEKRTYTYK*N 109
K+Y*N N+KRTY Y+ N
Sbjct: 523 KIY*NVNNKKRTYIYETN 470
Score = 28.6 bits (56), Expect(4) = 1e-072
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1 / -1
Query: 40 CVLLNQIVLK*HQRKEDLYI* 102
C+ +Q +LK Q+KEDLYI*
Sbjct: 539 CLSTHQNILKCQQQKEDLYI* 477
Score = 26.3 bits (51), Expect(4) = 5e-055
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -1
Query: 211 FYGEEPIV*RLY 246
FY EEPI+*RLY
Sbjct: 374 FYVEEPII*RLY 339
Score = 23.5 bits (45), Expect(4) = 2e-055
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -3 / +3
Query: 99 YV*VLFSLVSF*YNLV 52
Y+*VLF L++F*Y L+
Sbjct: 480 YI*VLFLLLTF*YILM 527
Score = 23.5 bits (45), Expect(5) = 4e-079
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / +3
Query: 303 KG*ETHHSD 277
KG*ETHH+D
Sbjct: 291 KG*ETHHAD 317
Score = 23.5 bits (45), Expect(5) = 1e-045
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +3 / -3
Query: 66 KMTPTKRGPIHI 101
KM+ TKRGPI++
Sbjct: 513 KMSTTKRGPIYM 478
Score = 22.6 bits (43), Expect(4) = 2e-055
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1 / +1
Query: 311 RAQKVERLITQI 276
++ KVERLITQI
Sbjct: 283 QSSKVERLITQI 318
Score = 22.1 bits (42), Expect(5) = 1e-045
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3 / -3
Query: 192 VAVATFFLW*RTNRLKAI 245
V + FL *RTN LKAI
Sbjct: 393 VLLFAMFLC*RTNYLKAI 340
Score = 21.7 bits (41), Expect(3) = 9e-042
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +2
Query: 247 NIAFRRLVLHHR 212
+IAFR LVL HR
Sbjct: 338 DIAFR*LVLQHR 373
>gb|BG159292.1|BG159292 OV2_5_H06.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 584
Score = 216 bits (467), Expect(5) = 1e-077
Identities = 87/97 (89%), Positives = 91/97 (93%)
Frame = -1 / +1
Query: 587 AQPGKVGIYNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDL 408
A+PGKVGIYNVGTGQGRSV EFV+AC KATGASIKVEYLARRPGDYAEVYSDPSKI DL
Sbjct: 1 AEPGKVGIYNVGTGQGRSVNEFVKACMKATGASIKVEYLARRPGDYAEVYSDPSKIYKDL 180
Query: 407 NWTAQYTDLGQSLAQAWKWQKAHPNGYASA*FRAQKV 297
NWTAQYTDLGQSLAQAWKWQKAHPNGY SA*FR Q++
Sbjct: 181 NWTAQYTDLGQSLAQAWKWQKAHPNGYGSA*FRVQRL 291
Score = 205 bits (443), Expect(4) = 4e-071
Identities = 84/93 (90%), Positives = 87/93 (93%)
Frame = +1 / -1
Query: 304 *ALNQADAYPFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYST 483
* LNQAD YPFGCAFCHFHAWARLWPRSVYWAVQLRS+ IFDGSLYTSA*SPGLRARYST
Sbjct: 284 *TLNQADPYPFGCAFCHFHAWARLWPRSVYWAVQLRSL*IFDGSLYTSA*SPGLRARYST 105
Query: 484 LIEAPVAFLQASTNSVTDLPWPVPTL*IPTLPG 582
L+EAPVAF+QA TNS TDLP PVPTL*IPTLPG
Sbjct: 104 LMEAPVAFMQAFTNSFTDLPCPVPTL*IPTLPG 6
Score = 161 bits (347), Expect(4) = 2e-055
Identities = 69/88 (78%), Positives = 75/88 (85%)
Frame = -3 / +3
Query: 564 LQCRNRPR*ISD*VCRSLQEGNGSFYQGRISCP*TWRLCRGIQRSVENPHGPQLDSPIHG 385
LQCRNR R*IS+*VC SL EGN SF+QG ISCP*T RLC GIQ S+EN GPQLDSPIH
Sbjct: 24 LQCRNRTR*ISE*VCESLHEGNRSFHQG*ISCP*TRRLC*GIQ*SIENLQGPQLDSPIH* 203
Query: 384 SWPKPCPGVEMAEGAPERICVSLIQSSK 301
SWPKPCPG+EMAE AP+RI +SLIQSSK
Sbjct: 204 SWPKPCPGMEMAESAPKRIWISLIQSSK 287
Score = 155 bits (333), Expect(4) = 2e-053
Identities = 72/90 (80%), Positives = 75/90 (83%)
Frame = +3 / -3
Query: 318 G*RISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSS 497
G* ISV VR LPFP LGKALAKI VLGCPVEV DFR I VYL IIS STGKIF+LD SS
Sbjct: 270 G*SISVWVRFLPFPCLGKALAKISVLGCPVEVLVDFRWITVYLSIISGSTGKIFNLDGSS 91
Query: 498 RCLLASFYKLSH*STLACSDIVDSNFAWLS 587
CL ASF+KL H*STL+CSDIVDSNFAWLS
Sbjct: 90 CCLHASFHKLIH*STLSCSDIVDSNFAWLS 1
Score = 138 bits (295), Expect(3) = 7e-042
Identities = 69/94 (73%), Positives = 72/94 (76%)
Frame = -2 / +2
Query: 583 SQAKLESTMSEQAKVDQ*LSL*KLARRQRELLSRSNILPVDLEIMPRYTAIRRKSSWTST 404
SQAKLESTMSEQ KVDQ*+SL*KLA RQ+EL SR NILPVD EIM RYT I RKS+ TST
Sbjct: 5 SQAKLESTMSEQDKVDQ*MSL*KLA*RQQELPSRLNILPVDPEIMLRYTVIHRKSTRTST 184
Query: 403 GQPNTRILAKALPXXXXXXXXXXTDMRQPDSELK 302
GQPNT ILAKALP TDM QPDSE K
Sbjct: 185 GQPNTLILAKALPRHGNGRKRTQTDMDQPDSEFK 286
Score = 111 bits (238), Expect(5) = 4e-044
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = +2 / -2
Query: 302 FEL*IRLTHIRSGAPSAISTPGQGFGQDPCIGLSS*GP*GFSTDRCIPRHNLQVYGQDIR 481
FEL*IRL HIR GA SAIS PGQGFGQD CIGLSS*GP FS D CIP+HNL+VYGQDI+
Sbjct: 286 FEL*IRLIHIRLGALSAISMPGQGFGQDQCIGLSS*GPCRFSMDHCIPQHNLRVYGQDIQ 107
Score = 68.4 bits (143), Expect(5) = 1e-077
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -3 / +3
Query: 201 QQQQKSRDSFIAELEEDKSIAGRIHYLFLD*FHLY 97
+QQ KSRDSFIA LEEDKSI R+HYLFLD*FH+Y
Sbjct: 375 KQQHKSRDSFIAVLEEDKSITERMHYLFLD*FHIY 479
Score = 67.0 bits (140), Expect(4) = 2e-055
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = -2 / +2
Query: 199 TATEES*FFYCRAGRRQEYRRENTLPVP*LVSFI 98
TAT++S*FFYC AGRRQ+Y REN LPVP*LVS+I
Sbjct: 377 TATQKS*FFYCSAGRRQKYHRENALPVP*LVSYI 478
Score = 63.8 bits (133), Expect(4) = 4e-071
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +3 / -3
Query: 96 HINETNQGTGSVFSLRYSCLLPALQ*KNHDSSVAV 200
+I ETNQGTGS FSL Y CLLPALQ*KNHD VAV
Sbjct: 480 YIYETNQGTGSAFSL*YFCLLPALQ*KNHDFCVAV 376
Score = 58.3 bits (121), Expect(4) = 2e-053
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1 / -1
Query: 103 MKLIKEQVVYSPCDTLVFFQLCNKRITT 186
MKLIKEQVV+S CDT VFFQ CNKRITT
Sbjct: 473 MKLIKEQVVHSLCDTFVFFQHCNKRITT 390
Score = 55.6 bits (115), Expect(3) = 7e-042
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = -1 / +1
Query: 179 ILLLQSWKKTRVSQGEYTTCSLISFIYM 96
ILLLQ WKKT+VSQ E TTCSLISFIY+
Sbjct: 397 ILLLQCWKKTKVSQRECTTCSLISFIYI 480
Score = 49.2 bits (101), Expect(5) = 4e-044
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +2 / -2
Query: 521 QTQSLIYLGLFRHCRFQLCLAE 586
QT SLIYL LFRHCRFQLCLA+
Sbjct: 67 QTHSLIYLVLFRHCRFQLCLAQ 2
Score = 47.3 bits (97), Expect(5) = 4e-044
Identities = 21/38 (55%), Positives = 21/38 (55%)
Frame = +2 / -2
Query: 98 YK*N*SRNR*CILPXXXXXXXXXXXKESRLFCCCCYVF 211
Y *N*SRNR*CIL KESRL CCC F
Sbjct: 478 YI*N*SRNR*CILSVILLSSSSTAIKESRLLCCCLLCF 365
Score = 30.4 bits (60), Expect(5) = 1e-077
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / +1
Query: 112 LVSFICIGPLFVGVILVQF 56
L+SFI IGPLFV IL+ F
Sbjct: 460 LISFIYIGPLFVVDILIYF 516
Score = 29.9 bits (59), Expect(4) = 4e-071
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2 / -3
Query: 188 FCCCCYVFSMVKNQSSEGYI 247
FC SM+KNQ SEGYI
Sbjct: 390 FCVAVCYVSMLKNQLSEGYI 331
Score = 29.0 bits (57), Expect(5) = 1e-077
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / +2
Query: 246 I*PSDDWFFTIEKT*QQQQKS 184
I*PSD+WFF IE QKS
Sbjct: 332 I*PSDNWFFNIET*QTATQKS 394
Score = 28.6 bits (56), Expect(4) = 2e-053
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2 / -3
Query: 56 KLY*NDTNEKRTYTYK*N 109
K+Y*N N+KRTY Y+ N
Sbjct: 516 KIY*NVNNKKRTYIYETN 463
Score = 28.6 bits (56), Expect(4) = 4e-071
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1 / -2
Query: 40 CVLLNQIVLK*HQRKEDLYI* 102
C+ +Q +LK Q+KEDLYI*
Sbjct: 532 CLSTHQNILKCQQQKEDLYI* 470
Score = 26.3 bits (51), Expect(4) = 2e-053
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -2
Query: 211 FYGEEPIV*RLY 246
FY EEPI+*RLY
Sbjct: 367 FYVEEPII*RLY 332
Score = 23.5 bits (45), Expect(4) = 2e-055
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -3 / +2
Query: 99 YV*VLFSLVSF*YNLV 52
Y+*VLF L++F*Y L+
Sbjct: 473 YI*VLFLLLTF*YILM 520
Score = 23.5 bits (45), Expect(5) = 1e-077
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / +2
Query: 303 KG*ETHHSD 277
KG*ETHH+D
Sbjct: 284 KG*ETHHAD 310
Score = 23.5 bits (45), Expect(5) = 4e-044
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +3 / -1
Query: 66 KMTPTKRGPIHI 101
KM+ TKRGPI++
Sbjct: 506 KMSTTKRGPIYM 471
Score = 22.6 bits (43), Expect(4) = 2e-055
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1 / +3
Query: 311 RAQKVERLITQI 276
++ KVERLITQI
Sbjct: 276 QSSKVERLITQI 311
Score = 22.1 bits (42), Expect(5) = 4e-044
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3 / -1
Query: 192 VAVATFFLW*RTNRLKAI 245
V + FL *RTN LKAI
Sbjct: 386 VLLFAMFLC*RTNYLKAI 333
Score = 21.7 bits (41), Expect(3) = 7e-042
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 247 NIAFRRLVLHHR 212
+IAFR LVL HR
Sbjct: 331 DIAFR*LVLQHR 366
>gb|BG159555.1|BG159555 OV2_5_H06.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 484
Score = 216 bits (467), Expect(4) = 5e-074
Identities = 87/97 (89%), Positives = 91/97 (93%)
Frame = -1 / +1
Query: 587 AQPGKVGIYNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDL 408
A+PGKVGIYNVGTGQGRSV EFV+AC KATGASIKVEYLARRPGDYAEVYSDPSKI DL
Sbjct: 1 AEPGKVGIYNVGTGQGRSVNEFVKACMKATGASIKVEYLARRPGDYAEVYSDPSKIYKDL 180
Query: 407 NWTAQYTDLGQSLAQAWKWQKAHPNGYASA*FRAQKV 297
NWTAQYTDLGQSLAQAWKWQKAHPNGY SA*FR Q++
Sbjct: 181 NWTAQYTDLGQSLAQAWKWQKAHPNGYGSA*FRVQRL 291
Score = 205 bits (443), Expect(3) = 4e-068
Identities = 84/93 (90%), Positives = 87/93 (93%)
Frame = +1 / -3
Query: 304 *ALNQADAYPFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYST 483
* LNQAD YPFGCAFCHFHAWARLWPRSVYWAVQLRS+ IFDGSLYTSA*SPGLRARYST
Sbjct: 284 *TLNQADPYPFGCAFCHFHAWARLWPRSVYWAVQLRSL*IFDGSLYTSA*SPGLRARYST 105
Query: 484 LIEAPVAFLQASTNSVTDLPWPVPTL*IPTLPG 582
L+EAPVAF+QA TNS TDLP PVPTL*IPTLPG
Sbjct: 104 LMEAPVAFMQAFTNSFTDLPCPVPTL*IPTLPG 6
Score = 161 bits (347), Expect(3) = 8e-054
Identities = 69/88 (78%), Positives = 75/88 (85%)
Frame = -3 / +3
Query: 564 LQCRNRPR*ISD*VCRSLQEGNGSFYQGRISCP*TWRLCRGIQRSVENPHGPQLDSPIHG 385
LQCRNR R*IS+*VC SL EGN SF+QG ISCP*T RLC GIQ S+EN GPQLDSPIH
Sbjct: 24 LQCRNRTR*ISE*VCESLHEGNRSFHQG*ISCP*TRRLC*GIQ*SIENLQGPQLDSPIH* 203
Query: 384 SWPKPCPGVEMAEGAPERICVSLIQSSK 301
SWPKPCPG+EMAE AP+RI +SLIQSSK
Sbjct: 204 SWPKPCPGMEMAESAPKRIWISLIQSSK 287
Score = 155 bits (333), Expect(3) = 2e-050
Identities = 72/90 (80%), Positives = 75/90 (83%)
Frame = +3 / -2
Query: 318 G*RISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSS 497
G* ISV VR LPFP LGKALAKI VLGCPVEV DFR I VYL IIS STGKIF+LD SS
Sbjct: 270 G*SISVWVRFLPFPCLGKALAKISVLGCPVEVLVDFRWITVYLSIISGSTGKIFNLDGSS 91
Query: 498 RCLLASFYKLSH*STLACSDIVDSNFAWLS 587
CL ASF+KL H*STL+CSDIVDSNFAWLS
Sbjct: 90 CCLHASFHKLIH*STLSCSDIVDSNFAWLS 1
Score = 138 bits (295), Expect(3) = 5e-042
Identities = 69/94 (73%), Positives = 72/94 (76%)
Frame = -2 / +2
Query: 583 SQAKLESTMSEQAKVDQ*LSL*KLARRQRELLSRSNILPVDLEIMPRYTAIRRKSSWTST 404
SQAKLESTMSEQ KVDQ*+SL*KLA RQ+EL SR NILPVD EIM RYT I RKS+ TST
Sbjct: 5 SQAKLESTMSEQDKVDQ*MSL*KLA*RQQELPSRLNILPVDPEIMLRYTVIHRKSTRTST 184
Query: 403 GQPNTRILAKALPXXXXXXXXXXTDMRQPDSELK 302
GQPNT ILAKALP TDM QPDSE K
Sbjct: 185 GQPNTLILAKALPRHGNGRKRTQTDMDQPDSEFK 286
Score = 111 bits (238), Expect(4) = 2e-042
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = +2 / -1
Query: 302 FEL*IRLTHIRSGAPSAISTPGQGFGQDPCIGLSS*GP*GFSTDRCIPRHNLQVYGQDIR 481
FEL*IRL HIR GA SAIS PGQGFGQD CIGLSS*GP FS D CIP+HNL+VYGQDI+
Sbjct: 286 FEL*IRLIHIRLGALSAISMPGQGFGQDQCIGLSS*GPCRFSMDHCIPQHNLRVYGQDIQ 107
Score = 68.4 bits (143), Expect(4) = 5e-074
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -3 / +3
Query: 201 QQQQKSRDSFIAELEEDKSIAGRIHYLFLD*FHLY 97
+QQ KSRDSFIA LEEDKSI R+HYLFLD*FH+Y
Sbjct: 375 KQQHKSRDSFIAVLEEDKSITERMHYLFLD*FHIY 479
Score = 67.0 bits (140), Expect(3) = 8e-054
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = -2 / +2
Query: 199 TATEES*FFYCRAGRRQEYRRENTLPVP*LVSFI 98
TAT++S*FFYC AGRRQ+Y REN LPVP*LVS+I
Sbjct: 377 TATQKS*FFYCSAGRRQKYHRENALPVP*LVSYI 478
Score = 63.8 bits (133), Expect(3) = 4e-068
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +3 / -2
Query: 96 HINETNQGTGSVFSLRYSCLLPALQ*KNHDSSVAV 200
+I ETNQGTGS FSL Y CLLPALQ*KNHD VAV
Sbjct: 480 YIYETNQGTGSAFSL*YFCLLPALQ*KNHDFCVAV 376
Score = 58.3 bits (121), Expect(3) = 2e-050
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1 / -3
Query: 103 MKLIKEQVVYSPCDTLVFFQLCNKRITT 186
MKLIKEQVV+S CDT VFFQ CNKRITT
Sbjct: 473 MKLIKEQVVHSLCDTFVFFQHCNKRITT 390
Score = 55.6 bits (115), Expect(3) = 5e-042
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = -1 / +1
Query: 179 ILLLQSWKKTRVSQGEYTTCSLISFIYM 96
ILLLQ WKKT+VSQ E TTCSLISFIY+
Sbjct: 397 ILLLQCWKKTKVSQRECTTCSLISFIYI 480
Score = 49.2 bits (101), Expect(4) = 2e-042
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +2 / -1
Query: 521 QTQSLIYLGLFRHCRFQLCLAE 586
QT SLIYL LFRHCRFQLCLA+
Sbjct: 67 QTHSLIYLVLFRHCRFQLCLAQ 2
Score = 47.3 bits (97), Expect(4) = 2e-042
Identities = 21/38 (55%), Positives = 21/38 (55%)
Frame = +2 / -1
Query: 98 YK*N*SRNR*CILPXXXXXXXXXXXKESRLFCCCCYVF 211
Y *N*SRNR*CIL KESRL CCC F
Sbjct: 478 YI*N*SRNR*CILSVILLSSSSTAIKESRLLCCCLLCF 365
Score = 29.9 bits (59), Expect(3) = 4e-068
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2 / -2
Query: 188 FCCCCYVFSMVKNQSSEGYI 247
FC SM+KNQ SEGYI
Sbjct: 390 FCVAVCYVSMLKNQLSEGYI 331
Score = 29.0 bits (57), Expect(4) = 5e-074
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / +2
Query: 246 I*PSDDWFFTIEKT*QQQQKS 184
I*PSD+WFF IE QKS
Sbjct: 332 I*PSDNWFFNIET*QTATQKS 394
Score = 26.3 bits (51), Expect(3) = 2e-050
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -1
Query: 211 FYGEEPIV*RLY 246
FY EEPI+*RLY
Sbjct: 367 FYVEEPII*RLY 332
Score = 23.5 bits (45), Expect(4) = 5e-074
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / +2
Query: 303 KG*ETHHSD 277
KG*ETHH+D
Sbjct: 284 KG*ETHHAD 310
Score = 22.6 bits (43), Expect(3) = 8e-054
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1 / +3
Query: 311 RAQKVERLITQI 276
++ KVERLITQI
Sbjct: 276 QSSKVERLITQI 311
Score = 22.1 bits (42), Expect(4) = 2e-042
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3 / -3
Query: 192 VAVATFFLW*RTNRLKAI 245
V + FL *RTN LKAI
Sbjct: 386 VLLFAMFLC*RTNYLKAI 333
Score = 21.7 bits (41), Expect(3) = 5e-042
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 247 NIAFRRLVLHHR 212
+IAFR LVL HR
Sbjct: 331 DIAFR*LVLQHR 366
>gb|BE359967.1|BE359967 DG1_60_B02.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 635
Score = 274 bits (593), Expect = 2e-072
Identities = 111/137 (81%), Positives = 120/137 (87%)
Frame = -1 / +1
Query: 737 ISGACFDAALGIIPGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYN 558
ISGACFDAALGIIPGLKV+GTDY T DGTCVRDYIDVTDLVDAHVKAL KAQ G+VGIYN
Sbjct: 1 ISGACFDAALGIIPGLKVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAQRGRVGIYN 180
Query: 557 VGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLG 378
VGTG+GRSV EFV+ACKKATG IKV+Y RRPGDYAEVYSDP+KI +LNWTAQ TDL
Sbjct: 181 VGTGKGRSVKEFVDACKKATGVDIKVDYFPRRPGDYAEVYSDPAKINKELNWTAQRTDLH 360
Query: 377 QSLAQAWKWQKAHPNGY 327
+SL AW WQKAH +GY
Sbjct: 361 ESLRVAWTWQKAHRSGY 411
Score = 204 bits (441), Expect = 2e-051
Identities = 99/135 (73%), Positives = 103/135 (76%)
Frame = +1 / -1
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P CAFCH HA RL RSV AVQ S+ I GSLYTSA*SPGLR + STL+ PVAFL
Sbjct: 407 PLLCAFCHVHATLRLSWRSVRCAVQFSSLLILAGSLYTSA*SPGLRGK*STLMSTPVAFL 228
Query: 511 QASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTF 690
QASTNS TD P+PVPTL IPTLP AL AFT ASTRSVTSM*SLTQVPS V *SVP TF
Sbjct: 227 QASTNSFTDRPFPVPTLYIPTLPLCALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLTF 48
Query: 691 SPGMIPKAASKQAPD 735
PGMIP AASK APD
Sbjct: 47 KPGMIPSAASKHAPD 3
Score = 120 bits (257), Expect = 4e-026
Identities = 56/137 (40%), Positives = 86/137 (62%)
Frame = +3 / -3
Query: 327 ISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCL 506
I+ VRLLP PR +AL ++ L PV++ D R+AVYL +++ S ++ +LD S CL
Sbjct: 411 IATPVRLLPCPRHPEALMEVGALRRPVQLLVDLGRVAVYLRVVAWSAREVVNLDVDSSCL 232
Query: 507 LASFYKLSH*STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTN 686
LA +L H* T + ++IV +N A L + ++ I K+ DI+V+S S++ ++G+ N
Sbjct: 231 LAGINELLH*PTFSSANIVYTNSASLCLVERLHMGINKVGDINVISYTSAVRCFIVGTFN 52
Query: 687 L*PWNDSQSCIKASTGY 737
L* WNDSQ C+KA Y
Sbjct: 51 L*TWNDSQCCVKACPRY 1
>gb|CN147765.1|CN147765 WOUND1_52_A01.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_52_A01_A002 3', mRNA sequence
Length = 625
Score = 205 bits (443), Expect(5) = 9e-072
Identities = 82/95 (86%), Positives = 86/95 (90%)
Frame = -1 / +1
Query: 581 PGKVGIYNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNW 402
PGKVGIYNVGTGQGRSV EFV+AC KATGASIKVEYLARRPGDY EVYSDP KI DLNW
Sbjct: 1 PGKVGIYNVGTGQGRSVNEFVKACMKATGASIKVEYLARRPGDYVEVYSDPWKIYKDLNW 180
Query: 401 TAQYTDLGQSLAQAWKWQKAHPNGYASA*FRAQKV 297
TAQYTD GQSL+QAWKWQKAHPNGY SA*FR Q++
Sbjct: 181 TAQYTDFGQSLSQAWKWQKAHPNGYGSA*FRVQRL 285
Score = 191 bits (411), Expect(4) = 1e-063
Identities = 77/92 (83%), Positives = 82/92 (89%)
Frame = +1 / -3
Query: 304 *ALNQADAYPFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYST 483
* LNQAD YPFGCAFCHFHAW RLWP+SVYWAVQ +S+ IF GSLYTS *SPGLRARYST
Sbjct: 278 *TLNQADPYPFGCAFCHFHAWERLWPKSVYWAVQFKSL*IFHGSLYTST*SPGLRARYST 99
Query: 484 LIEAPVAFLQASTNSVTDLPWPVPTL*IPTLP 579
L+EAPVAF+QA TNS TDLP PVPTL*IPTLP
Sbjct: 98 LMEAPVAFMQAFTNSFTDLPCPVPTL*IPTLP 3
Score = 147 bits (315), Expect(5) = 5e-047
Identities = 68/88 (77%), Positives = 72/88 (81%)
Frame = +3 / -2
Query: 318 G*RISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSS 497
G* ISV VR LPFP LGKALAKI VLGCPV+V DF I VYL IIS STGKIF+LD SS
Sbjct: 264 G*SISVWVRFLPFPCLGKALAKISVLGCPVQVLVDFPWITVYLNIISGSTGKIFNLDGSS 85
Query: 498 RCLLASFYKLSH*STLACSDIVDSNFAW 581
CL ASF+KL H*STL+CSDIVDSNFAW
Sbjct: 84 CCLHASFHKLIH*STLSCSDIVDSNFAW 1
Score = 147 bits (315), Expect(4) = 4e-049
Identities = 65/88 (73%), Positives = 72/88 (81%)
Frame = -3 / +3
Query: 564 LQCRNRPR*ISD*VCRSLQEGNGSFYQGRISCP*TWRLCRGIQRSVENPHGPQLDSPIHG 385
LQCRNR R*IS+*VC SL EGN SF+QG ISCP*T RLC GIQ S+EN G +LDSPIH
Sbjct: 18 LQCRNRTR*ISE*VCESLHEGNRSFHQG*ISCP*TRRLC*GIQ*SMENLQGLELDSPIH* 197
Query: 384 SWPKPCPGVEMAEGAPERICVSLIQSSK 301
WPKP PG+EMAE AP+RI +SLIQSSK
Sbjct: 198 FWPKPFPGMEMAESAPKRIWISLIQSSK 281
Score = 127 bits (272), Expect(2) = 3e-037
Identities = 65/93 (69%), Positives = 68/93 (73%)
Frame = -2 / +2
Query: 580 QAKLESTMSEQAKVDQ*LSL*KLARRQRELLSRSNILPVDLEIMPRYTAIRRKSSWTSTG 401
QAKLESTMSEQ KVDQ*+SL*KLA RQ+EL SR NILPVD EIM RYT I KS+ T TG
Sbjct: 2 QAKLESTMSEQDKVDQ*MSL*KLA*RQQELPSRLNILPVDPEIMLRYTVIHGKSTRT*TG 181
Query: 400 QPNTRILAKALPXXXXXXXXXXTDMRQPDSELK 302
QPNT ILAKA P TDM QPDSE K
Sbjct: 182 QPNTLILAKAFPRHGNGRKRTQTDMDQPDSEFK 280
Score = 102 bits (218), Expect(3) = 1e-036
Identities = 44/60 (73%), Positives = 49/60 (81%)
Frame = +2 / -1
Query: 302 FEL*IRLTHIRSGAPSAISTPGQGFGQDPCIGLSS*GP*GFSTDRCIPRHNLQVYGQDIR 481
FEL*IRL HIR GA SAIS PG+GFGQ+ CIGLSS P FS D CIP+HNL+VYGQDI+
Sbjct: 280 FEL*IRLIHIRLGALSAISMPGKGFGQNQCIGLSSSSPCRFSMDHCIPQHNLRVYGQDIQ 101
Score = 64.8 bits (135), Expect(5) = 9e-072
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -3 / +3
Query: 201 QQQQKSRDSFIAELEEDKSIAGRIHYLFLD*FHLY 97
+QQ KS DSFIA LEEDKSI R+HYLFLD*FH+Y
Sbjct: 369 KQQHKSCDSFIAVLEEDKSITERMHYLFLD*FHIY 473
Score = 60.2 bits (125), Expect(4) = 4e-049
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = -2 / +2
Query: 199 TATEES*FFYCRAGRRQEYRRENTLPVP*LVSFI 98
TAT++ *FFYC GRRQ+Y REN LPVP LVS+I
Sbjct: 371 TATQKL*FFYCSVGRRQKYHRENALPVPGLVSYI 472
Score = 57.0 bits (118), Expect(4) = 1e-063
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = +3 / -2
Query: 96 HINETNQGTGSVFSLRYSCLLPALQ*KNHDSSVAV 200
+I ETN GTGS FSL Y CLLP LQ*KNH+ VAV
Sbjct: 474 YIYETNPGTGSAFSL*YFCLLPTLQ*KNHNFCVAV 370
Score = 56.5 bits (117), Expect(5) = 5e-047
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +1 / -3
Query: 103 MKLIKEQVVYSPCDTLVFFQLCNKRITT 186
MKLI+EQVV+S CDT VFFQ CNKRITT
Sbjct: 467 MKLIQEQVVHSLCDTFVFFQHCNKRITT 384
Score = 52.8 bits (109), Expect(2) = 3e-037
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = -1 / +1
Query: 179 ILLLQSWKKTRVSQGEYTTCSLISFIYM 96
ILLLQ WKKT+VSQ E TTCS ISFIY+
Sbjct: 391 ILLLQCWKKTKVSQRECTTCSWISFIYI 474
Score = 46.4 bits (95), Expect(3) = 1e-036
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +2 / -1
Query: 521 QTQSLIYLGLFRHCRFQLCL 580
QT SLIYL LFRHCRFQLCL
Sbjct: 61 QTHSLIYLVLFRHCRFQLCL 2
Score = 44.1 bits (90), Expect(3) = 1e-036
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +2 / -1
Query: 98 YK*N*SRNR*CILPXXXXXXXXXXXKESRLFCCCCYVF 211
Y *N*SRNR*CIL KES+L CCC F
Sbjct: 472 YI*N*SRNR*CILSVILLSSSNTAIKESQLLCCCLLWF 359
Score = 28.6 bits (56), Expect(4) = 1e-063
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2 / -2
Query: 56 KLY*NDTNEKRTYTYK*N 109
K+Y*N N+KRTY Y+ N
Sbjct: 510 KIY*NVNNKKRTYIYETN 457
Score = 27.2 bits (53), Expect(5) = 9e-072
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / +2
Query: 246 I*PSDDWFFTIE 211
I*PSD+WFF +E
Sbjct: 326 I*PSDNWFFNLE 361
Score = 26.7 bits (52), Expect(5) = 9e-072
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / +1
Query: 109 VSFICIGPLFVGVILVQF 56
+SFI IGP FV IL+ F
Sbjct: 457 ISFIYIGPFFVVDILIYF 510
Score = 26.3 bits (51), Expect(4) = 1e-063
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2 / -2
Query: 188 FCCCCYVFSMVKNQSSEGYI 247
FC S +KNQ SEGYI
Sbjct: 384 FCVAVCYGSKLKNQLSEGYI 325
Score = 23.5 bits (45), Expect(4) = 4e-049
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -3 / +2
Query: 99 YV*VLFSLVSF*YNLV 52
Y+*VLF L++F*Y L+
Sbjct: 467 YI*VLFLLLTF*YILM 514
Score = 23.5 bits (45), Expect(5) = 9e-072
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / +2
Query: 303 KG*ETHHSD 277
KG*ETHH+D
Sbjct: 278 KG*ETHHAD 304
Score = 22.6 bits (43), Expect(4) = 4e-049
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1 / +3
Query: 311 RAQKVERLITQI 276
++ KVERLITQI
Sbjct: 270 QSSKVERLITQI 305
Score = 22.1 bits (42), Expect(5) = 5e-047
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +3 / -3
Query: 66 KMTPTKRGPIHI 101
KM+ TK+GPI++
Sbjct: 500 KMSTTKKGPIYM 465
Score = 21.7 bits (41), Expect(5) = 5e-047
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / -1
Query: 220 EEPIV*RLY 246
EEPI+*RLY
Sbjct: 352 EEPII*RLY 326
Score = 21.7 bits (41), Expect(5) = 5e-047
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -3
Query: 1 HEI*STLSTTRF 36
HEI TLSTT+F
Sbjct: 581 HEIDLTLSTTQF 546
>gb|CD233593.1|CD233593 SS1_3_B09.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_3_B09_A012 3', mRNA sequence
Length = 655
Score = 270 bits (585), Expect = 2e-071
Identities = 109/135 (80%), Positives = 118/135 (87%)
Frame = -1 / +1
Query: 731 GACFDAALGIIPGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVG 552
GACFDAALGIIPGLKV+GTDY T DGTCVRDYIDVTDLVDAHVKAL KAQ G+VGIYNVG
Sbjct: 1 GACFDAALGIIPGLKVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAQRGRVGIYNVG 180
Query: 551 TGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQS 372
TG+GRSV EFV+ACKKATG IKV+Y RRPGDYAEVYSDP+KI +LNWTAQ TDL +S
Sbjct: 181 TGKGRSVKEFVDACKKATGVDIKVDYFPRRPGDYAEVYSDPAKINKELNWTAQRTDLHES 360
Query: 371 LAQAWKWQKAHPNGY 327
L AW WQKAH +GY
Sbjct: 361 LRVAWTWQKAHRSGY 405
Score = 199 bits (428), Expect = 1e-049
Identities = 97/133 (72%), Positives = 101/133 (75%)
Frame = +1 / -3
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P CAFCH HA RL RSV AVQ S+ I GSLYTSA*SPGLR + STL+ PVAFL
Sbjct: 401 PLLCAFCHVHATLRLSWRSVRCAVQFSSLLILAGSLYTSA*SPGLRGK*STLMSTPVAFL 222
Query: 511 QASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTF 690
QASTNS TD P+PVPTL IPTLP AL AFT ASTRSVTSM*SLTQVPS V *SVP TF
Sbjct: 221 QASTNSFTDRPFPVPTLYIPTLPLCALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLTF 42
Query: 691 SPGMIPKAASKQA 729
PGMIP AASK A
Sbjct: 41 KPGMIPSAASKHA 3
Score = 119 bits (254), Expect = 1e-025
Identities = 55/133 (41%), Positives = 85/133 (63%)
Frame = +3 / -2
Query: 327 ISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCL 506
I+ VRLLP PR +AL ++ L PV++ D R+AVYL +++ S ++ +LD S CL
Sbjct: 405 IATPVRLLPCPRHPEALMEVGALRRPVQLLVDLGRVAVYLRVVAWSAREVVNLDVDSSCL 226
Query: 507 LASFYKLSH*STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTN 686
LA +L H* T + ++IV +N A L + ++ I K+ DI+V+S S++ ++G+ N
Sbjct: 225 LAGINELLH*PTFSSANIVYTNSASLRLVERLHMGINKVGDINVISYTSAVRCFIVGTFN 46
Query: 687 L*PWNDSQSCIKA 725
L* WNDSQ C+KA
Sbjct: 45 L*TWNDSQCCVKA 7
>gb|BG463311.1|BG463311 EM1_48_A03.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 622
Score = 196 bits (422), Expect(5) = 3e-070
Identities = 79/88 (89%), Positives = 82/88 (93%)
Frame = -1 / +1
Query: 560 NVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDL 381
NVGTGQGRSV EFV+AC KATGASIKVEYLARRPGDYAEVYSDPSKI DLNWTAQYTDL
Sbjct: 1 NVGTGQGRSVNEFVKACMKATGASIKVEYLARRPGDYAEVYSDPSKIYKDLNWTAQYTDL 180
Query: 380 GQSLAQAWKWQKAHPNGYASA*FRAQKV 297
GQSLAQAWKWQKAHPNGY SA*FR Q++
Sbjct: 181 GQSLAQAWKWQKAHPNGYGSA*FRVQRL 264
Score = 188 bits (405), Expect(4) = 3e-065
Identities = 76/85 (89%), Positives = 79/85 (92%)
Frame = +1 / -3
Query: 304 *ALNQADAYPFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYST 483
* LNQAD YPFGCAFCHFHAWARLWPRSVYWAVQLRS+ IFDGSLYTSA*SPGLRARYST
Sbjct: 257 *TLNQADPYPFGCAFCHFHAWARLWPRSVYWAVQLRSL*IFDGSLYTSA*SPGLRARYST 78
Query: 484 LIEAPVAFLQASTNSVTDLPWPVPT 558
L+EAPVAF+QA TNS TDLP PVPT
Sbjct: 77 LMEAPVAFMQAFTNSFTDLPCPVPT 3
Score = 157 bits (338), Expect(4) = 3e-054
Identities = 67/86 (77%), Positives = 73/86 (84%)
Frame = -3 / +3
Query: 558 CRNRPR*ISD*VCRSLQEGNGSFYQGRISCP*TWRLCRGIQRSVENPHGPQLDSPIHGSW 379
CRNR R*IS+*VC SL EGN SF+QG ISCP*T RLC GIQ S+EN GPQLDSPIH SW
Sbjct: 3 CRNRTR*ISE*VCESLHEGNRSFHQG*ISCP*TRRLC*GIQ*SIENLQGPQLDSPIH*SW 182
Query: 378 PKPCPGVEMAEGAPERICVSLIQSSK 301
PKPCPG+EMAE AP+RI +SLIQSSK
Sbjct: 183 PKPCPGMEMAESAPKRIWISLIQSSK 260
Score = 133 bits (284), Expect(4) = 2e-046
Identities = 63/81 (77%), Positives = 66/81 (81%)
Frame = +3 / -2
Query: 318 G*RISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSS 497
G* ISV VR LPFP LGKALAKI VLGCPVEV DFR I VYL IIS STGKIF+LD SS
Sbjct: 243 G*SISVWVRFLPFPCLGKALAKISVLGCPVEVLVDFRWITVYLSIISGSTGKIFNLDGSS 64
Query: 498 RCLLASFYKLSH*STLACSDI 560
CL ASF+KL H*STL+CSDI
Sbjct: 63 CCLHASFHKLIH*STLSCSDI 1
Score = 121 bits (259), Expect(3) = 6e-037
Identities = 61/86 (70%), Positives = 64/86 (74%)
Frame = -2 / +2
Query: 559 MSEQAKVDQ*LSL*KLARRQRELLSRSNILPVDLEIMPRYTAIRRKSSWTSTGQPNTRIL 380
MSEQ KVDQ*+SL*KLA RQ+EL SR NILPVD EIM RYT I RKS+ TSTGQPNT IL
Sbjct: 2 MSEQDKVDQ*MSL*KLA*RQQELPSRLNILPVDPEIMLRYTVIHRKSTRTSTGQPNTLIL 181
Query: 379 AKALPXXXXXXXXXXTDMRQPDSELK 302
AKALP TDM QPDSE K
Sbjct: 182 AKALPRHGNGRKRTQTDMDQPDSEFK 259
Score = 111 bits (238), Expect(6) = 8e-038
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = +2 / -1
Query: 302 FEL*IRLTHIRSGAPSAISTPGQGFGQDPCIGLSS*GP*GFSTDRCIPRHNLQVYGQDIR 481
FEL*IRL HIR GA SAIS PGQGFGQD CIGLSS*GP FS D CIP+HNL+VYGQDI+
Sbjct: 259 FEL*IRLIHIRLGALSAISMPGQGFGQDQCIGLSS*GPCRFSMDHCIPQHNLRVYGQDIQ 80
Score = 68.4 bits (143), Expect(5) = 3e-070
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -3 / +3
Query: 201 QQQQKSRDSFIAELEEDKSIAGRIHYLFLD*FHLY 97
+QQ KSRDSFIA LEEDKSI R+HYLFLD*FH+Y
Sbjct: 348 KQQHKSRDSFIAVLEEDKSITERMHYLFLD*FHIY 452
Score = 67.0 bits (140), Expect(4) = 3e-054
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = -2 / +2
Query: 199 TATEES*FFYCRAGRRQEYRRENTLPVP*LVSFI 98
TAT++S*FFYC AGRRQ+Y REN LPVP*LVS+I
Sbjct: 350 TATQKS*FFYCSAGRRQKYHRENALPVP*LVSYI 451
Score = 63.8 bits (133), Expect(4) = 3e-065
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +3 / -2
Query: 96 HINETNQGTGSVFSLRYSCLLPALQ*KNHDSSVAV 200
+I ETNQGTGS FSL Y CLLPALQ*KNHD VAV
Sbjct: 453 YIYETNQGTGSAFSL*YFCLLPALQ*KNHDFCVAV 349
Score = 58.3 bits (121), Expect(4) = 2e-046
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1 / -3
Query: 103 MKLIKEQVVYSPCDTLVFFQLCNKRITT 186
MKLIKEQVV+S CDT VFFQ CNKRITT
Sbjct: 446 MKLIKEQVVHSLCDTFVFFQHCNKRITT 363
Score = 55.6 bits (115), Expect(3) = 6e-037
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = -1 / +1
Query: 179 ILLLQSWKKTRVSQGEYTTCSLISFIYM 96
ILLLQ WKKT+VSQ E TTCSLISFIY+
Sbjct: 370 ILLLQCWKKTKVSQRECTTCSLISFIYI 453
Score = 47.3 bits (97), Expect(6) = 8e-038
Identities = 21/38 (55%), Positives = 21/38 (55%)
Frame = +2 / -1
Query: 98 YK*N*SRNR*CILPXXXXXXXXXXXKESRLFCCCCYVF 211
Y *N*SRNR*CIL KESRL CCC F
Sbjct: 451 YI*N*SRNR*CILSVILLSSSSTAIKESRLLCCCLLCF 338
Score = 30.4 bits (60), Expect(5) = 3e-070
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / +1
Query: 112 LVSFICIGPLFVGVILVQF 56
L+SFI IGPLFV IL+ F
Sbjct: 433 LISFIYIGPLFVVDILIYF 489
Score = 28.6 bits (56), Expect(4) = 2e-046
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2 / -2
Query: 56 KLY*NDTNEKRTYTYK*N 109
K+Y*N N+KRTY Y+ N
Sbjct: 489 KIY*NVNNKKRTYIYETN 436
Score = 28.6 bits (56), Expect(4) = 3e-065
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1 / -1
Query: 40 CVLLNQIVLK*HQRKEDLYI* 102
C+ +Q +LK Q+KEDLYI*
Sbjct: 505 CLSTHQNILKCQQQKEDLYI* 443
Score = 27.2 bits (53), Expect(6) = 8e-038
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2 / -1
Query: 521 QTQSLIYLGLFRH 559
QT SLIYL LFRH
Sbjct: 40 QTHSLIYLVLFRH 2
Score = 27.2 bits (53), Expect(4) = 3e-065
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2 / -2
Query: 188 FCCCCYVFSMVKNQSSEGYI 247
FC SM+KNQ SE YI
Sbjct: 363 FCVAVCYVSMLKNQLSESYI 304
Score = 24.9 bits (48), Expect(4) = 2e-046
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1 / -1
Query: 211 FYGEEPIV*RLY 246
FY EEPI+*+LY
Sbjct: 340 FYVEEPII*KLY 305
Score = 24.4 bits (47), Expect(5) = 3e-070
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -3 / +2
Query: 246 I*PSDDWFFTIEKT*QQQQKS 184
I* SD+WFF IE QKS
Sbjct: 305 I*LSDNWFFNIET*QTATQKS 367
Score = 23.5 bits (45), Expect(4) = 3e-054
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -3 / +2
Query: 99 YV*VLFSLVSF*YNLV 52
Y+*VLF L++F*Y L+
Sbjct: 446 YI*VLFLLLTF*YILM 493
Score = 23.5 bits (45), Expect(5) = 3e-070
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / +2
Query: 303 KG*ETHHSD 277
KG*ETHH+D
Sbjct: 257 KG*ETHHAD 283
Score = 23.5 bits (45), Expect(6) = 8e-038
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +3 / -3
Query: 66 KMTPTKRGPIHI 101
KM+ TKRGPI++
Sbjct: 479 KMSTTKRGPIYM 444
Score = 22.6 bits (43), Expect(4) = 3e-054
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1 / +3
Query: 311 RAQKVERLITQI 276
++ KVERLITQI
Sbjct: 249 QSSKVERLITQI 284
Score = 22.1 bits (42), Expect(6) = 8e-038
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3 / -3
Query: 192 VAVATFFLW*RTNRLKAI 245
V + FL *RTN LKAI
Sbjct: 359 VLLFAMFLC*RTNYLKAI 306
Score = 21.7 bits (41), Expect(3) = 6e-037
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 247 NIAFRRLVLHHR 212
+IAFR LVL HR
Sbjct: 304 DIAFR*LVLQHR 339
Score = 21.7 bits (41), Expect(6) = 8e-038
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -3
Query: 1 HEI*STLSTTRF 36
HEI TLSTT+F
Sbjct: 560 HEIDLTLSTTQF 525
>gb|CW269978.1|CW269978 104_741_11402142_148_35329_025 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402142, DNA
sequence
Length = 599
Score = 181 bits (390), Expect(5) = 1e-069
Identities = 73/82 (89%), Positives = 76/82 (92%)
Frame = -1 / +2
Query: 542 GRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLAQ 363
GRSV EFV+AC KATGASIKVEYLARRPGDYAEVYSDPSKI DLNWTAQYTDLGQSLAQ
Sbjct: 221 GRSVNEFVKACMKATGASIKVEYLARRPGDYAEVYSDPSKIYKDLNWTAQYTDLGQSLAQ 400
Query: 362 AWKWQKAHPNGYASA*FRAQKV 297
AWKWQKAHPNGY SA*FR Q++
Sbjct: 401 AWKWQKAHPNGYGSA*FRVQRL 466
Score = 178 bits (384), Expect(4) = 1e-066
Identities = 72/80 (90%), Positives = 75/80 (93%)
Frame = +1 / -3
Query: 304 *ALNQADAYPFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYST 483
* LNQAD YPFGCAFCHFHAWARLWPRSVYWAVQLRS+ IFDGSLYTSA*SPGLRARYST
Sbjct: 459 *TLNQADPYPFGCAFCHFHAWARLWPRSVYWAVQLRSL*IFDGSLYTSA*SPGLRARYST 280
Query: 484 LIEAPVAFLQASTNSVTDLP 543
L+EAPVAF+QA TNS TDLP
Sbjct: 279 LMEAPVAFMQAFTNSFTDLP 220
Score = 146 bits (314), Expect(4) = 3e-044
Identities = 63/81 (77%), Positives = 69/81 (85%)
Frame = -3 / +1
Query: 543 R*ISD*VCRSLQEGNGSFYQGRISCP*TWRLCRGIQRSVENPHGPQLDSPIHGSWPKPCP 364
R*IS+*VC SL EGN SF+QG ISCP*T RLC GIQ S+EN GPQLDSPIH SWPKPCP
Sbjct: 220 R*ISE*VCESLHEGNRSFHQG*ISCP*TRRLC*GIQ*SIENLQGPQLDSPIH*SWPKPCP 399
Query: 363 GVEMAEGAPERICVSLIQSSK 301
G+EMAE AP+RI +SLIQSSK
Sbjct: 400 GMEMAESAPKRIWISLIQSSK 462
Score = 120 bits (256), Expect(4) = 5e-044
Identities = 58/75 (77%), Positives = 60/75 (80%)
Frame = +3 / -2
Query: 318 G*RISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSS 497
G* ISV VR LPFP LGKALAKI VLGCPVEV DFR I VYL IIS STGKIF+LD SS
Sbjct: 445 G*SISVWVRFLPFPCLGKALAKISVLGCPVEVLVDFRWITVYLSIISGSTGKIFNLDGSS 266
Query: 498 RCLLASFYKLSH*ST 542
CL ASF+KL H*ST
Sbjct: 265 CCLHASFHKLIH*ST 221
Score = 111 bits (238), Expect(4) = 2e-025
Identities = 56/81 (69%), Positives = 60/81 (74%)
Frame = -2 / +3
Query: 544 KVDQ*LSL*KLARRQRELLSRSNILPVDLEIMPRYTAIRRKSSWTSTGQPNTRILAKALP 365
+VDQ*+SL*KLA RQ+EL SR NILPVD EIM RYT I RKS+ TSTGQPNT ILAKALP
Sbjct: 219 QVDQ*MSL*KLA*RQQELPSRLNILPVDPEIMLRYTVIHRKSTRTSTGQPNTLILAKALP 398
Query: 364 XXXXXXXXXXTDMRQPDSELK 302
TDM QPDSE K
Sbjct: 399 RHGNGRKRTQTDMDQPDSEFK 461
Score = 111 bits (238), Expect(3) = 2e-037
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = +2 / -1
Query: 302 FEL*IRLTHIRSGAPSAISTPGQGFGQDPCIGLSS*GP*GFSTDRCIPRHNLQVYGQDIR 481
FEL*IRL HIR GA SAIS PGQGFGQD CIGLSS*GP FS D CIP+HNL+VYGQDI+
Sbjct: 461 FEL*IRLIHIRLGALSAISMPGQGFGQDQCIGLSS*GPCRFSMDHCIPQHNLRVYGQDIQ 282
Score = 77.1 bits (162), Expect(5) = 1e-069
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = -1 / +3
Query: 635 IDVTDLVDAHVKALGKAQPGKVGIYNVGTGQG 540
IDVTDLVDAHVKALGKA+PGKVGIYNVGTGQG
Sbjct: 3 IDVTDLVDAHVKALGKAEPGKVGIYNVGTGQG 98
Score = 72.5 bits (152), Expect(4) = 1e-066
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +3 / -1
Query: 537 STLACSDIVDSNFAWLSFTKSFYVSIYKICDID 635
+TL+CSDIVDSNFAWLSFTKSF + IYKICDID
Sbjct: 101 TTLSCSDIVDSNFAWLSFTKSFDMGIYKICDID 3
Score = 67.5 bits (141), Expect(4) = 5e-044
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = +2 / -3
Query: 542 LGLFRHCRFQLCLAELYQELLREHLQDL*HRC 637
L LFRHCRFQLCLA+LYQEL HLQDL*HRC
Sbjct: 96 LVLFRHCRFQLCLAQLYQEL*HGHLQDL*HRC 1
Score = 61.1 bits (127), Expect(3) = 2e-037
Identities = 28/32 (87%), Positives = 28/32 (87%)
Frame = +1 / -2
Query: 541 PWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM 636
P PVPTL*IPTLPG ALPRA T ASTRSVTSM
Sbjct: 97 PCPVPTL*IPTLPGSALPRALTWASTRSVTSM 2
Score = 36.8 bits (74), Expect(4) = 3e-044
Identities = 21/33 (63%), Positives = 21/33 (63%)
Frame = -2 / +1
Query: 637 TSMSQIXXXXXXXXXXXLSQAKLESTMSEQAKV 539
TSMSQI LSQAKLESTMSEQ KV
Sbjct: 1 TSMSQIL*MPMSKLLVKLSQAKLESTMSEQDKV 99
Score = 34.5 bits (69), Expect(5) = 1e-069
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -2 / +3
Query: 199 TATEES*FFYCRAGRR 152
TAT++S*FFYC AGRR
Sbjct: 552 TATQKS*FFYCSAGRR 599
Score = 31.8 bits (63), Expect(4) = 1e-066
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / -2
Query: 153 LLPALQ*KNHDSSVAV 200
LLPALQ*KNHD VAV
Sbjct: 598 LLPALQ*KNHDFCVAV 551
Score = 30.9 bits (61), Expect(4) = 3e-044
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3 / +1
Query: 201 QQQQKSRDSFIAELEE 154
+QQ KSRDSFIA LEE
Sbjct: 550 KQQHKSRDSFIAVLEE 597
Score = 29.9 bits (59), Expect(4) = 1e-066
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2 / -2
Query: 188 FCCCCYVFSMVKNQSSEGYI 247
FC SM+KNQ SEGYI
Sbjct: 565 FCVAVCYVSMLKNQLSEGYI 506
Score = 29.0 bits (57), Expect(5) = 1e-069
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / +3
Query: 246 I*PSDDWFFTIEKT*QQQQKS 184
I*PSD+WFF IE QKS
Sbjct: 507 I*PSDNWFFNIET*QTATQKS 569
Score = 27.2 bits (53), Expect(3) = 2e-037
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / -1
Query: 173 KESRLFCCCCYVF 211
KESRL CCC F
Sbjct: 578 KESRLLCCCLLCF 540
Score = 27.2 bits (53), Expect(4) = 5e-044
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -3
Query: 154 FFQLCNKRITT 186
FFQ CNKRITT
Sbjct: 597 FFQHCNKRITT 565
Score = 26.3 bits (51), Expect(4) = 5e-044
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -1
Query: 211 FYGEEPIV*RLY 246
FY EEPI+*RLY
Sbjct: 542 FYVEEPII*RLY 507
Score = 23.5 bits (45), Expect(5) = 1e-069
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / +3
Query: 303 KG*ETHHSD 277
KG*ETHH+D
Sbjct: 459 KG*ETHHAD 485
Score = 22.6 bits (43), Expect(4) = 3e-044
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1 / +1
Query: 311 RAQKVERLITQI 276
++ KVERLITQI
Sbjct: 451 QSSKVERLITQI 486
Score = 22.1 bits (42), Expect(4) = 2e-025
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3 / +2
Query: 564 LQCRNRPR*ISD 529
LQCRNR R + D
Sbjct: 74 LQCRNRTRLLKD 109
Score = 21.7 bits (41), Expect(4) = 2e-025
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / +2
Query: 179 ILLLQSWKK 153
ILLLQ WKK
Sbjct: 572 ILLLQCWKK 598
Score = 21.7 bits (41), Expect(4) = 2e-025
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +2
Query: 247 NIAFRRLVLHHR 212
+IAFR LVL HR
Sbjct: 506 DIAFR*LVLQHR 541
>gb|CN135205.1|CN135205 OX1_31_F02.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_31_F02_A002 3', mRNA sequence
Length = 683
Score = 188 bits (406), Expect(5) = 2e-069
Identities = 76/85 (89%), Positives = 79/85 (92%)
Frame = -1 / +3
Query: 551 TGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQS 372
TGQGRSV EFV+AC KATGASIKVEYLARRPGDYAEVYSDPSKI DLNWTAQYTDLGQS
Sbjct: 3 TGQGRSVNEFVKACMKATGASIKVEYLARRPGDYAEVYSDPSKIYKDLNWTAQYTDLGQS 182
Query: 371 LAQAWKWQKAHPNGYASA*FRAQKV 297
LAQAWKWQKAHPNGY SA*FR Q++
Sbjct: 183 LAQAWKWQKAHPNGYGSA*FRVQRL 257
Score = 182 bits (393), Expect(4) = 2e-064
Identities = 74/83 (89%), Positives = 77/83 (92%)
Frame = +1 / -2
Query: 304 *ALNQADAYPFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYST 483
* LNQAD YPFGCAFCHFHAWARLWPRSVYWAVQLRS+ IFDGSLYTSA*SPGLRARYST
Sbjct: 250 *TLNQADPYPFGCAFCHFHAWARLWPRSVYWAVQLRSL*IFDGSLYTSA*SPGLRARYST 71
Query: 484 LIEAPVAFLQASTNSVTDLPWPV 552
L+EAPVAF+QA TNS TDLP PV
Sbjct: 70 LMEAPVAFMQAFTNSFTDLPCPV 2
Score = 150 bits (323), Expect(4) = 3e-052
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = -3 / +2
Query: 552 NRPR*ISD*VCRSLQEGNGSFYQGRISCP*TWRLCRGIQRSVENPHGPQLDSPIHGSWPK 373
NR R*IS+*VC SL EGN SF+QG ISCP*T RLC GIQ S+EN GPQLDSPIH SWPK
Sbjct: 2 NRTR*ISE*VCESLHEGNRSFHQG*ISCP*TRRLC*GIQ*SIENLQGPQLDSPIH*SWPK 181
Query: 372 PCPGVEMAEGAPERICVSLIQSSK 301
PCPG+EMAE AP+RI +SLIQSSK
Sbjct: 182 PCPGMEMAESAPKRIRISLIQSSK 253
Score = 126 bits (269), Expect(4) = 6e-045
Identities = 59/78 (75%), Positives = 63/78 (80%)
Frame = +3 / -1
Query: 318 G*RISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSS 497
G* +SV VR LPFP LGKALAKI VLGCPVEV DFR I VYL IIS STGKIF+LD SS
Sbjct: 236 G*SVSVWVRFLPFPCLGKALAKISVLGCPVEVLVDFRWITVYLSIISGSTGKIFNLDGSS 57
Query: 498 RCLLASFYKLSH*STLAC 551
CL ASF+KL H*STL+C
Sbjct: 56 CCLHASFHKLIH*STLSC 3
Score = 114 bits (244), Expect(3) = 8e-035
Identities = 58/84 (69%), Positives = 61/84 (72%)
Frame = -2 / +1
Query: 553 EQAKVDQ*LSL*KLARRQRELLSRSNILPVDLEIMPRYTAIRRKSSWTSTGQPNTRILAK 374
EQ KVDQ*+SL*KLA RQ+EL SR NILPVD EIM RYT I RKS+ TSTGQPNT ILAK
Sbjct: 1 EQDKVDQ*MSL*KLA*RQQELPSRLNILPVDPEIMLRYTVIHRKSTRTSTGQPNTLILAK 180
Query: 373 ALPXXXXXXXXXXTDMRQPDSELK 302
ALP TD QPDSE K
Sbjct: 181 ALPRHGNGRKRTQTDTDQPDSEFK 252
Score = 108 bits (230), Expect(4) = 9e-034
Identities = 47/60 (78%), Positives = 50/60 (83%)
Frame = +2 / -3
Query: 302 FEL*IRLTHIRSGAPSAISTPGQGFGQDPCIGLSS*GP*GFSTDRCIPRHNLQVYGQDIR 481
FEL*IRL IR GA SAIS PGQGFGQD CIGLSS*GP FS D CIP+HNL+VYGQDI+
Sbjct: 252 FEL*IRLIRIRLGALSAISMPGQGFGQDQCIGLSS*GPCRFSMDHCIPQHNLRVYGQDIQ 73
Score = 68.4 bits (143), Expect(5) = 2e-069
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -3 / +2
Query: 201 QQQQKSRDSFIAELEEDKSIAGRIHYLFLD*FHLY 97
+QQ KSRDSFIA LEEDKSI R+HYLFLD*FH+Y
Sbjct: 341 KQQHKSRDSFIAVLEEDKSITERMHYLFLD*FHIY 445
Score = 67.0 bits (140), Expect(4) = 3e-052
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = -2 / +1
Query: 199 TATEES*FFYCRAGRRQEYRRENTLPVP*LVSFI 98
TAT++S*FFYC AGRRQ+Y REN LPVP*LVS+I
Sbjct: 343 TATQKS*FFYCSAGRRQKYHRENALPVP*LVSYI 444
Score = 63.8 bits (133), Expect(4) = 2e-064
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +3 / -1
Query: 96 HINETNQGTGSVFSLRYSCLLPALQ*KNHDSSVAV 200
+I ETNQGTGS FSL Y CLLPALQ*KNHD VAV
Sbjct: 446 YIYETNQGTGSAFSL*YFCLLPALQ*KNHDFCVAV 342
Score = 58.3 bits (121), Expect(4) = 6e-045
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1 / -2
Query: 103 MKLIKEQVVYSPCDTLVFFQLCNKRITT 186
MKLIKEQVV+S CDT VFFQ CNKRITT
Sbjct: 439 MKLIKEQVVHSLCDTFVFFQHCNKRITT 356
Score = 55.6 bits (115), Expect(3) = 8e-035
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = -1 / +3
Query: 179 ILLLQSWKKTRVSQGEYTTCSLISFIYM 96
ILLLQ WKKT+VSQ E TTCSLISFIY+
Sbjct: 363 ILLLQCWKKTKVSQRECTTCSLISFIYI 446
Score = 47.3 bits (97), Expect(4) = 9e-034
Identities = 21/38 (55%), Positives = 21/38 (55%)
Frame = +2 / -3
Query: 98 YK*N*SRNR*CILPXXXXXXXXXXXKESRLFCCCCYVF 211
Y *N*SRNR*CIL KESRL CCC F
Sbjct: 444 YI*N*SRNR*CILSVILLSSSSTAIKESRLLCCCLLCF 331
Score = 30.4 bits (60), Expect(5) = 2e-069
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / +3
Query: 112 LVSFICIGPLFVGVILVQF 56
L+SFI IGPLFV IL+ F
Sbjct: 426 LISFIYIGPLFVVDILIYF 482
Score = 29.9 bits (59), Expect(4) = 2e-064
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2 / -1
Query: 188 FCCCCYVFSMVKNQSSEGYI 247
FC SM+KNQ SEGYI
Sbjct: 356 FCVAVCYVSMLKNQLSEGYI 297
Score = 29.0 bits (57), Expect(5) = 2e-069
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / +1
Query: 246 I*PSDDWFFTIEKT*QQQQKS 184
I*PSD+WFF IE QKS
Sbjct: 298 I*PSDNWFFNIET*QTATQKS 360
Score = 28.6 bits (56), Expect(4) = 6e-045
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2 / -1
Query: 56 KLY*NDTNEKRTYTYK*N 109
K+Y*N N+KRTY Y+ N
Sbjct: 482 KIY*NVNNKKRTYIYETN 429
Score = 28.6 bits (56), Expect(4) = 2e-064
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1 / -3
Query: 40 CVLLNQIVLK*HQRKEDLYI* 102
C+ +Q +LK Q+KEDLYI*
Sbjct: 498 CLSTHQNILKCQQQKEDLYI* 436
Score = 26.3 bits (51), Expect(4) = 6e-045
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -3
Query: 211 FYGEEPIV*RLY 246
FY EEPI+*RLY
Sbjct: 333 FYVEEPII*RLY 298
Score = 23.5 bits (45), Expect(4) = 3e-052
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -3 / +1
Query: 99 YV*VLFSLVSF*YNLV 52
Y+*VLF L++F*Y L+
Sbjct: 439 YI*VLFLLLTF*YILM 486
Score = 23.5 bits (45), Expect(5) = 2e-069
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / +1
Query: 303 KG*ETHHSD 277
KG*ETHH+D
Sbjct: 250 KG*ETHHAD 276
Score = 23.5 bits (45), Expect(4) = 9e-034
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +3 / -2
Query: 66 KMTPTKRGPIHI 101
KM+ TKRGPI++
Sbjct: 472 KMSTTKRGPIYM 437
Score = 22.6 bits (43), Expect(4) = 3e-052
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1 / +2
Query: 311 RAQKVERLITQI 276
++ KVERLITQI
Sbjct: 242 QSSKVERLITQI 277
Score = 22.1 bits (42), Expect(4) = 9e-034
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3 / -2
Query: 192 VAVATFFLW*RTNRLKAI 245
V + FL *RTN LKAI
Sbjct: 352 VLLFAMFLC*RTNYLKAI 299
Score = 21.7 bits (41), Expect(3) = 8e-035
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +3
Query: 247 NIAFRRLVLHHR 212
+IAFR LVL HR
Sbjct: 297 DIAFR*LVLQHR 332
>gb|BG049722.1|BG049722 EM1_8_C12.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 620
Score = 251 bits (542), Expect = 2e-065
Identities = 101/127 (79%), Positives = 110/127 (86%)
Frame = -1 / +3
Query: 707 GIIPGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQGRSVT 528
GIIPGLKV+GTDY T DGTCVRDYIDVTDLVDAHVKAL KAQ G+VGIYNVGTG+GRSV
Sbjct: 3 GIIPGLKVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAQRGRVGIYNVGTGKGRSVK 182
Query: 527 EFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLAQAWKWQ 348
EFV+ACKKATG IKV+Y RRPGDYAEVYSDP+KI +LNWTAQ TDL +SL AW WQ
Sbjct: 183 EFVDACKKATGVDIKVDYFPRRPGDYAEVYSDPAKINKELNWTAQRTDLHESLRVAWTWQ 362
Query: 347 KAHPNGY 327
KAH +GY
Sbjct: 363 KAHRSGY 383
Score = 189 bits (407), Expect = 8e-047
Identities = 92/126 (73%), Positives = 96/126 (76%)
Frame = +1 / -2
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P CAFCH HA RL RSV AVQ S+ I GSLYTSA*SPGLR + STL+ PVAFL
Sbjct: 379 PLLCAFCHVHATLRLSWRSVRCAVQFSSLLILAGSLYTSA*SPGLRGK*STLMSTPVAFL 200
Query: 511 QASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTF 690
QASTNS TD P+PVPTL IPTLP AL AFT ASTRSVTSM*SLTQVPS V *SVP TF
Sbjct: 199 QASTNSFTDRPFPVPTLYIPTLPLCALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLTF 20
Query: 691 SPGMIP 708
PGMIP
Sbjct: 19 KPGMIP 2
Score = 107 bits (229), Expect = 3e-022
Identities = 51/127 (40%), Positives = 80/127 (62%)
Frame = +3 / -1
Query: 327 ISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCL 506
I+ VRLLP PR +AL ++ L PV++ D R+AVYL +++ S ++ +LD S CL
Sbjct: 383 IATPVRLLPCPRHPEALMEVGALRRPVQLLVDLGRVAVYLRVVAWSAREVVNLDVDSSCL 204
Query: 507 LASFYKLSH*STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTN 686
LA +L H* T + ++IV +N A L + ++ I K+ DI+V+S S++ ++G+ N
Sbjct: 203 LAGINELLH*PTFSSANIVYTNSASLCLVERLHMGINKVGDINVISYTSAVRCFIVGTFN 24
Query: 687 L*PWNDS 707
L* WNDS
Sbjct: 23 L*TWNDS 3
>gb|CW338169.1|CW338169 104_838_11484601_148_36127_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484601, DNA
sequence
Length = 604
Score = 173 bits (372), Expect(5) = 8e-065
Identities = 71/82 (86%), Positives = 74/82 (90%)
Frame = -1 / -3
Query: 542 GRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLAQ 363
GRSV EFV+AC KATGASIKVEYLARRPGDYAEVYSDPSKI L WTAQYTDLGQSLAQ
Sbjct: 539 GRSVNEFVKACMKATGASIKVEYLARRPGDYAEVYSDPSKIYKVLIWTAQYTDLGQSLAQ 360
Query: 362 AWKWQKAHPNGYASA*FRAQKV 297
AWKWQKAHPNGY SA*FR Q++
Sbjct: 359 AWKWQKAHPNGYGSA*FRVQRL 294
Score = 168 bits (361), Expect(4) = 5e-060
Identities = 68/80 (85%), Positives = 73/80 (91%)
Frame = +1 / +1
Query: 304 *ALNQADAYPFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYST 483
* LN AD YPFGCAFCHFHAWARLWPRSVY AVQ+R++ IFDGSLYTSA*SPGLRARYST
Sbjct: 301 *TLNHADPYPFGCAFCHFHAWARLWPRSVYCAVQMRTL*IFDGSLYTSA*SPGLRARYST 480
Query: 484 LIEAPVAFLQASTNSVTDLP 543
L+EAPVAF+QA TNS TDLP
Sbjct: 481 LMEAPVAFMQAFTNSFTDLP 540
Score = 139 bits (299), Expect(4) = 6e-049
Identities = 60/81 (74%), Positives = 67/81 (82%)
Frame = -3 / -2
Query: 543 R*ISD*VCRSLQEGNGSFYQGRISCP*TWRLCRGIQRSVENPHGPQLDSPIHGSWPKPCP 364
R*IS+*VC SL EGN SF+QG ISCP*T RLC GIQ S+EN GP LDS IH SWPKPCP
Sbjct: 540 R*ISE*VCESLHEGNRSFHQG*ISCP*TRRLC*GIQ*SIENLQGPHLDSAIH*SWPKPCP 361
Query: 363 GVEMAEGAPERICVSLIQSSK 301
G+EMAE AP+RI +S+IQSSK
Sbjct: 360 GMEMAESAPKRIWISMIQSSK 298
Score = 107 bits (228), Expect(4) = 2e-039
Identities = 53/72 (73%), Positives = 55/72 (76%)
Frame = +3 / +3
Query: 327 ISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCL 506
ISV VR LPFP LGKALAKI VL CP E DFR I VYL IIS STGKIF+LD SS CL
Sbjct: 324 ISVWVRFLPFPCLGKALAKISVLRCPDEDLVDFRWITVYLSIISGSTGKIFNLDGSSCCL 503
Query: 507 LASFYKLSH*ST 542
ASF+KL H*ST
Sbjct: 504 HASFHKLIH*ST 539
Score = 104 bits (221), Expect(4) = 1e-032
Identities = 45/60 (75%), Positives = 48/60 (80%)
Frame = +2 / +2
Query: 302 FEL*IRLTHIRSGAPSAISTPGQGFGQDPCIGLSS*GP*GFSTDRCIPRHNLQVYGQDIR 481
FEL*I L HIR GA SAIS PGQGFGQD CI LS *GP FS D CIP+HNL+VYGQDI+
Sbjct: 299 FEL*IMLIHIRLGALSAISMPGQGFGQDQCIALSR*GPCRFSMDHCIPQHNLRVYGQDIQ 478
Score = 100 bits (212), Expect(3) = 1e-030
Identities = 52/81 (64%), Positives = 58/81 (71%)
Frame = -2 / -1
Query: 544 KVDQ*LSL*KLARRQRELLSRSNILPVDLEIMPRYTAIRRKSSWTSTGQPNTRILAKALP 365
+VDQ*+SL*KLA RQ+EL SR NILPVD EIM RYT I RKS+ +S+GQ NT ILAKALP
Sbjct: 541 QVDQ*MSL*KLA*RQQELPSRLNILPVDPEIMLRYTVIHRKSTRSSSGQRNTLILAKALP 362
Query: 364 XXXXXXXXXXTDMRQPDSELK 302
TDM Q DSE K
Sbjct: 361 RHGNGRKRTQTDMDQHDSEFK 299
Score = 68.4 bits (143), Expect(5) = 8e-065
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -3 / -2
Query: 201 QQQQKSRDSFIAELEEDKSIAGRIHYLFLD*FHLY 97
+QQ KSRDSFIA LEEDKSI R+HYLFLD*FH+Y
Sbjct: 210 KQQHKSRDSFIAVLEEDKSITERMHYLFLD*FHIY 106
Score = 67.0 bits (140), Expect(4) = 6e-049
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = -2 / -1
Query: 199 TATEES*FFYCRAGRRQEYRRENTLPVP*LVSFI 98
TAT++S*FFYC AGRRQ+Y REN LPVP*LVS+I
Sbjct: 208 TATQKS*FFYCSAGRRQKYHRENALPVP*LVSYI 107
Score = 63.8 bits (133), Expect(4) = 5e-060
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +3 / +3
Query: 96 HINETNQGTGSVFSLRYSCLLPALQ*KNHDSSVAV 200
+I ETNQGTGS FSL Y CLLPALQ*KNHD VAV
Sbjct: 105 YIYETNQGTGSAFSL*YFCLLPALQ*KNHDFCVAV 209
Score = 58.3 bits (121), Expect(4) = 2e-039
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1 / +1
Query: 103 MKLIKEQVVYSPCDTLVFFQLCNKRITT 186
MKLIKEQVV+S CDT VFFQ CNKRITT
Sbjct: 112 MKLIKEQVVHSLCDTFVFFQHCNKRITT 195
Score = 55.6 bits (115), Expect(3) = 1e-030
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = -1 / -3
Query: 179 ILLLQSWKKTRVSQGEYTTCSLISFIYM 96
ILLLQ WKKT+VSQ E TTCSLISFIY+
Sbjct: 188 ILLLQCWKKTKVSQRECTTCSLISFIYI 105
Score = 47.3 bits (97), Expect(4) = 1e-032
Identities = 21/38 (55%), Positives = 21/38 (55%)
Frame = +2 / +2
Query: 98 YK*N*SRNR*CILPXXXXXXXXXXXKESRLFCCCCYVF 211
Y *N*SRNR*CIL KESRL CCC F
Sbjct: 107 YI*N*SRNR*CILSVILLSSSSTAIKESRLLCCCLLCF 220
Score = 30.4 bits (60), Expect(5) = 8e-065
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / -3
Query: 112 LVSFICIGPLFVGVILVQF 56
L+SFI IGPLFV IL+ F
Sbjct: 125 LISFIYIGPLFVVDILIYF 69
Score = 29.9 bits (59), Expect(4) = 5e-060
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2 / +3
Query: 188 FCCCCYVFSMVKNQSSEGYI 247
FC SM+KNQ SEGYI
Sbjct: 195 FCVAVCYVSMLKNQLSEGYI 254
Score = 29.0 bits (57), Expect(5) = 8e-065
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / -1
Query: 246 I*PSDDWFFTIEKT*QQQQKS 184
I*PSD+WFF IE QKS
Sbjct: 253 I*PSDNWFFNIET*QTATQKS 191
Score = 28.6 bits (56), Expect(4) = 2e-039
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2 / +3
Query: 56 KLY*NDTNEKRTYTYK*N 109
K+Y*N N+KRTY Y+ N
Sbjct: 69 KIY*NVNNKKRTYIYETN 122
Score = 28.6 bits (56), Expect(4) = 5e-060
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1 / +2
Query: 40 CVLLNQIVLK*HQRKEDLYI* 102
C+ +Q +LK Q+KEDLYI*
Sbjct: 53 CLSTHQNILKCQQQKEDLYI* 115
Score = 26.3 bits (51), Expect(4) = 2e-039
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 211 FYGEEPIV*RLY 246
FY EEPI+*RLY
Sbjct: 218 FYVEEPII*RLY 253
Score = 23.5 bits (45), Expect(4) = 6e-049
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -3 / -1
Query: 99 YV*VLFSLVSF*YNLV 52
Y+*VLF L++F*Y L+
Sbjct: 112 YI*VLFLLLTF*YILM 65
Score = 23.5 bits (45), Expect(5) = 8e-065
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / -1
Query: 303 KG*ETHHSD 277
KG*ETHH+D
Sbjct: 301 KG*ETHHAD 275
Score = 23.5 bits (45), Expect(4) = 1e-032
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 66 KMTPTKRGPIHI 101
KM+ TKRGPI++
Sbjct: 79 KMSTTKRGPIYM 114
Score = 22.6 bits (43), Expect(4) = 6e-049
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1 / -2
Query: 311 RAQKVERLITQI 276
++ KVERLITQI
Sbjct: 309 QSSKVERLITQI 274
Score = 22.1 bits (42), Expect(4) = 1e-032
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3 / +1
Query: 192 VAVATFFLW*RTNRLKAI 245
V + FL *RTN LKAI
Sbjct: 199 VLLFAMFLC*RTNYLKAI 252
Score = 21.7 bits (41), Expect(3) = 1e-030
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -3
Query: 247 NIAFRRLVLHHR 212
+IAFR LVL HR
Sbjct: 254 DIAFR*LVLQHR 219
>gb|AW287265.2|AW287265 LG1_268_G06.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 501
Score = 245 bits (530), Expect = 9e-064
Identities = 101/120 (84%), Positives = 110/120 (91%)
Frame = -1 / +3
Query: 1205 EPGRLQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTV 1026
EPGRLQFI ADLGD +AV +IF+ENAFDAVMHFAAVAYVGEST+EPLRYYHNIT+NTL V
Sbjct: 120 EPGRLQFIQADLGDPEAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITANTLVV 299
Query: 1025 LEAMAAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKSKK 846
LEAMA +NV TLIYSSTCATYGEP+ MPI E TPQ PINPYGKAKKMAEDIILDF+KSK+
Sbjct: 300 LEAMATHNVKTLIYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSKR 479
Score = 183 bits (394), Expect = 5e-045
Identities = 90/119 (75%), Positives = 95/119 (79%)
Frame = +1 / -3
Query: 850 FDFVKSKMMSSAIFFALPYGLIGF*GVVSTIGIVSGSP*VAHVLE*IRVFTLYAAIASRT 1029
FDF KSKM+SSAIF ALPYGLIG GV S +GI SGSP*VAHVLE*+RVFTL AIAS T
Sbjct: 475 FDFEKSKMISSAIFLALPYGLIGNWGVPSVMGIFSGSP*VAHVLE*MRVFTLCVAIASST 296
Query: 1030 VNVFDVMLW*YLSGSIVLSPT*ATAAKCITASNAFSENIFFTALASPKSA*IN*SLPGS 1206
VF VML *YL GS VLSPT*ATAAKCITASNAFS NI TA SPKSA +N + PGS
Sbjct: 295 TRVFAVML**YLRGSSVLSPT*ATAAKCITASNAFSANILLTASGSPKSACMNCNRPGS 119
Score = 128 bits (274), Expect = 2e-028
Identities = 55/116 (47%), Positives = 84/116 (72%)
Frame = +3 / -2
Query: 849 L*FCKI*DDVLRHLLCLTIWIDRILRSCFYNRHRIRFTIGCTRTRVNQSIYIICCHCLKN 1028
L* ++*DD+LRH L LTIW+DR L S F + H +R ++G TR RV++S++++C H ++
Sbjct: 476 L*L*EV*DDILRHFLGLTIWVDRKLGSSFSDGHLLRLSVGRTRARVDESLHVVCSHSFQH 297
Query: 1029 CQCVRCYVVVVPEWLHCALTNISNSSKVHNSVKCILRKYFLHSFGIA*VSINKLKP 1196
V V++V + ALTNI +SSKVHNS+KC+L KY ++SF I+*+S+ +L+P
Sbjct: 296 H*SVCGDVMIVSKRFKRALTNIGHSSKVHNSIKCVLCKYSINSFWIS*ISLYELQP 129
>gb|CL190298.1|CL190298 104_408_10905986_114_32484_009 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10905986, DNA
sequence
Length = 689
Score = 114 bits (243), Expect(3) = 1e-061
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = -1 / -3
Query: 818 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVR 681
RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVR
Sbjct: 438 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVR 301
Score = 109 bits (232), Expect(3) = 1e-061
Identities = 44/56 (78%), Positives = 49/56 (87%)
Frame = -1 / -2
Query: 692 LKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQGRSVTE 525
L+V+GTDY T DGTCVRDYIDVTDLVDAHVKAL KAQ G+VGIYNVGTG+G +E
Sbjct: 184 LQVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAQRGRVGIYNVGTGKGHVSSE 17
Score = 96.4 bits (204), Expect(3) = 2e-043
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +1 / +2
Query: 682 RTFSPGMIPKAASKQAPDIRPCSRSSGLGASPSRPSGSDPITLKYL 819
RTF PGMIP AASK APDIRPCSR+SGLGASP+ PSGS+P+TLKYL
Sbjct: 302 RTFKPGMIPSAASKHAPDIRPCSRNSGLGASPNLPSGSEPMTLKYL 439
Score = 78.0 bits (164), Expect(3) = 2e-043
Identities = 40/51 (78%), Positives = 41/51 (80%)
Frame = +1 / +3
Query: 541 PWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTFS 693
P+PVPTL IPTLP AL AFT ASTRSVTSM*SLTQVPS V *SVP T S
Sbjct: 33 PFPVPTLYIPTLPLCALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLTCS 185
Score = 54.2 bits (112), Expect(3) = 1e-061
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = -1 / -1
Query: 923 QNPINPYGKAKKMAEDIILDFTKSKKQSNMAVMI 822
Q PINPYG+ KKMAEDIILDF+KSK+ +++
Sbjct: 638 QFPINPYGRPKKMAEDIILDFSKSKRSDMAVMIL 537
Score = 46.9 bits (96), Expect(3) = 2e-043
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +1 / +1
Query: 850 FDFVKSKMMSSAIFFALPYGLIG 918
FDF KSKM+SSAIF LPYGLIG
Sbjct: 565 FDFEKSKMISSAIFLGLPYGLIG 633
>gb|CW338168.1|CW338168 104_838_11484601_116_36126_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484601, DNA
sequence
Length = 621
Score = 131 bits (280), Expect(3) = 6e-060
Identities = 54/62 (87%), Positives = 57/62 (91%)
Frame = +1 / -1
Query: 355 FHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFLQASTNSVT 534
FHAWARLWPRSVYW VQLRS+ IFDGSLYTSA*SPGLRARYSTL+EAPVAF+QA T S T
Sbjct: 621 FHAWARLWPRSVYWTVQLRSL*IFDGSLYTSA*SPGLRARYSTLMEAPVAFMQAFTKSFT 442
Query: 535 DL 540
DL
Sbjct: 441 DL 436
Score = 128 bits (274), Expect(3) = 7e-060
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = -1 / +2
Query: 539 RSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLAQA 360
RSV +FV+AC ATGASIKVEYLARRPGDYAEVYSDPSKI DLNWT QYTDLGQSLA A
Sbjct: 437 RSVKDFVKACMNATGASIKVEYLARRPGDYAEVYSDPSKIYKDLNWTVQYTDLGQSLAHA 616
Query: 359 W 357
W
Sbjct: 617 W 619
Score = 108 bits (231), Expect(3) = 7e-060
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = -1 / +3
Query: 689 KVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQG 540
+VRGTDY TA GTC+RDYIDVTDLVDAHVKALGKA+PGKVGIY+V TGQG
Sbjct: 162 QVRGTDYPTAHGTCIRDYIDVTDLVDAHVKALGKAEPGKVGIYHVRTGQG 311
Score = 103 bits (220), Expect(3) = 2e-040
Identities = 44/63 (69%), Positives = 50/63 (79%)
Frame = -3 / +1
Query: 543 R*ISD*VCRSLQEGNGSFYQGRISCP*TWRLCRGIQRSVENPHGPQLDSPIHGSWPKPCP 364
+*IS+ +C SL E N SF+QG ISCP*T RLC GIQ S+EN GPQLDSPIH SWPKPCP
Sbjct: 433 K*ISERLCESLHERNRSFHQG*ISCP*TRRLC*GIQ*SIENLQGPQLDSPIH*SWPKPCP 612
Query: 363 GVE 355
+E
Sbjct: 613 CME 621
Score = 101 bits (216), Expect(3) = 6e-060
Identities = 41/51 (80%), Positives = 46/51 (90%)
Frame = +3 / -2
Query: 537 STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTNL 689
+TL+CSD+VDSNFAWLSFTK F + IYKICDIDVV NASS+CSGVI STNL
Sbjct: 314 TTLSCSDMVDSNFAWLSFTKCFDMGIYKICDIDVVPNASSMCSGVISSTNL 162
Score = 94.5 bits (200), Expect(3) = 5e-043
Identities = 44/62 (70%), Positives = 49/62 (79%)
Frame = +3 / -3
Query: 357 PRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCLLASFYKLSH* 536
P +GKALAKI VL CPVEV DFR I VYL IIS STGKIF+LD SS C+ ASF+K+ H*
Sbjct: 619 PCMGKALAKISVLDCPVEVLVDFRWITVYLSIISGSTGKIFNLDGSSCCVHASFHKVFH* 440
Query: 537 ST 542
ST
Sbjct: 439 ST 434
Score = 86.8 bits (183), Expect(3) = 5e-043
Identities = 36/49 (73%), Positives = 39/49 (79%)
Frame = +2 / -1
Query: 542 LGLFRHCRFQLCLAELYQELLREHLQDL*HRCSL*RKFHLQWSNRFHEP 688
L LF H RFQLCLA+LYQ L HLQDL*HRCS * KFH+QW N+FHEP
Sbjct: 309 LVLFGHGRFQLCLAQLYQVL*HGHLQDL*HRCSP*CKFHVQWGNQFHEP 163
Score = 79.4 bits (167), Expect(3) = 5e-035
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +2 / -2
Query: 356 STPGQGFGQDPCIGLSS*GP*GFSTDRCIPRHNLQVYGQDIR 481
S GQGFGQD CIGLSS*GP FS D CIP+HNL+VYGQDI+
Sbjct: 620 SMHGQGFGQDQCIGLSS*GPCRFSMDHCIPQHNLRVYGQDIQ 495
Score = 76.7 bits (161), Expect(3) = 5e-035
Identities = 39/49 (79%), Positives = 39/49 (79%)
Frame = +1 / -3
Query: 541 PWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRT 687
P PV T *IPTLPG ALP A T ASTRSVTSM*SL QVP AV *SVPRT
Sbjct: 310 PCPVRTW*IPTLPGSALPSALTWASTRSVTSM*SLMQVPCAVG*SVPRT 164
Score = 65.2 bits (136), Expect(3) = 2e-040
Identities = 35/50 (70%), Positives = 35/50 (70%)
Frame = -2 / +1
Query: 688 RFVEPITPLQMELALETTSMSQIXXXXXXXXXXXLSQAKLESTMSEQAKV 539
RFVE ITPL MELAL TTSMSQI LSQAKLESTMSEQ KV
Sbjct: 163 RFVELITPLHMELALGTTSMSQIL*MPMSKHLVKLSQAKLESTMSEQDKV 312
Score = 39.1 bits (79), Expect(3) = 6e-060
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3 / -3
Query: 687 L*PWNDSQSCIKAST 731
L*PWNDSQSCIKAST
Sbjct: 46 L*PWNDSQSCIKAST 2
Score = 39.1 bits (79), Expect(3) = 7e-060
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1 / +2
Query: 731 GACFDAALGIIPGLKV 684
GACFDA LGIIPGLKV
Sbjct: 2 GACFDATLGIIPGLKV 49
Score = 38.2 bits (77), Expect(3) = 5e-043
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +1 / -1
Query: 667 E*SVPRTFSPGMIPKAASKQAP 732
E S+ TFSPGMIP+ ASKQAP
Sbjct: 66 EMSM*NTFSPGMIPRVASKQAP 1
Score = 37.7 bits (76), Expect(3) = 2e-040
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -2 / +3
Query: 730 VLALMQLWESFQG*RF 683
VLALMQLWESFQG*R+
Sbjct: 3 VLALMQLWESFQG*RY 50
Score = 36.3 bits (73), Expect(3) = 5e-035
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2 / -2
Query: 686 PLALE*FPKLHQSKH 730
PLALE*FP+LHQSKH
Sbjct: 47 PLALE*FPELHQSKH 3
>gb|CL160782.1|CL160782 104_351_10805235_116_31825_291 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805235, DNA
sequence
Length = 717
Score = 111 bits (237), Expect(3) = 3e-059
Identities = 44/45 (97%), Positives = 45/45 (100%)
Frame = -1 / +2
Query: 818 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKV 684
RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALG+IPGLKV
Sbjct: 191 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKV 325
Score = 107 bits (229), Expect(3) = 3e-059
Identities = 42/49 (85%), Positives = 46/49 (93%)
Frame = -1 / +3
Query: 686 VRGTDYSTADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQG 540
V+GTDY TADGTC+RDYIDVTDLVDAHVKAL KA+P KVGIYNVGTG+G
Sbjct: 477 VKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRG 623
Score = 95.0 bits (201), Expect(3) = 6e-039
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +1 / -1
Query: 685 TFSPGMIPKAASKQAPDIRPCSRSSGLGASPSRPSGSDPITLKYL 819
TF+PGM P AASK APDIRPCSRSSGLGASP+ PSGS+PITLKYL
Sbjct: 324 TFNPGMTPNAASKHAPDIRPCSRSSGLGASPNLPSGSEPITLKYL 190
Score = 73.5 bits (154), Expect(3) = 6e-039
Identities = 37/50 (74%), Positives = 41/50 (82%)
Frame = +1 / -3
Query: 541 PWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTF 690
P PVPTL*+PT G AL AFT*AST+SVTS+*SL QVPSAV *SVP T+
Sbjct: 622 PLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLTY 473
Score = 55.1 bits (114), Expect(3) = 3e-059
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = -1 / +1
Query: 914 INPYGKAKKMAEDIILDFTKSKKQSNMAVMILRYFNVI 801
INPYGKAKKM+EDIILDF+KSK +++ YF+ +
Sbjct: 1 INPYGKAKKMSEDIILDFSKSKGADMAVMILR*YFSAV 114
Score = 37.7 bits (76), Expect(3) = 6e-039
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +1 / -2
Query: 811 KYLKIMTAIFDCFFDFVKSKMMSSAIFFALPYGL 912
KY + FDF KS M+SS IF A PYGL
Sbjct: 104 KYYLKIMTAMSAPFDFEKSNMISSDIFLAFPYGL 3
>gb|CW352663.1|CW352663 fsbb001f015a20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f015a20, DNA
sequence
Length = 711
Score = 114 bits (243), Expect(3) = 4e-058
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = -1 / -3
Query: 818 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVR 681
RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVR
Sbjct: 142 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVR 5
Score = 98.7 bits (209), Expect(3) = 4e-058
Identities = 39/48 (81%), Positives = 42/48 (87%)
Frame = -1 / -1
Query: 1064 RYYHNITSNTLTVLEAMAAYNVNTLIYSSTCATYGEPDTMPIVETTPQ 921
RYYHNIT+NTL VLEAMA +NV TLIYSSTCATYGEP+ MPI E TPQ
Sbjct: 624 RYYHNITANTLVVLEAMATHNVKTLIYSSTCATYGEPEKMPITEGTPQ 481
Score = 96.4 bits (204), Expect(3) = 1e-041
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +1 / +3
Query: 682 RTFSPGMIPKAASKQAPDIRPCSRSSGLGASPSRPSGSDPITLKYL 819
RTF PGMIP AASK APDIRPCSR+SGLGASP+ PSGS+P+TLKYL
Sbjct: 6 RTFKPGMIPSAASKHAPDIRPCSRNSGLGASPNLPSGSEPMTLKYL 143
Score = 69.8 bits (146), Expect(3) = 1e-041
Identities = 35/47 (74%), Positives = 37/47 (78%)
Frame = +1 / +2
Query: 925 GVVSTIGIVSGSP*VAHVLE*IRVFTLYAAIASRTVNVFDVMLW*YL 1065
GV S +GI SGSP*VAHVLE*+RVFTL AIAS T VF VML *YL
Sbjct: 485 GVPSVMGIFSGSP*VAHVLE*MRVFTLCVAIASSTTRVFAVML**YL 625
Score = 57.9 bits (120), Expect(3) = 4e-058
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = -1 / -1
Query: 923 QNPINPYGKAKKMAEDIILDFTKSKKQSNMAVMI 822
Q PINPYGKAKKMAEDIILDF+KSK+ +++
Sbjct: 342 QFPINPYGKAKKMAEDIILDFSKSKRSDMAVMIL 241
Score = 48.7 bits (100), Expect(3) = 1e-041
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +1 / +2
Query: 850 FDFVKSKMMSSAIFFALPYGLIG 918
FDF KSKM+SSAIF ALPYGLIG
Sbjct: 269 FDFEKSKMISSAIFLALPYGLIG 337
>gb|BG739395.1|BG739395 EM1_82_D08.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 574
Score = 208 bits (448), Expect = 2e-052
Identities = 85/109 (77%), Positives = 93/109 (85%)
Frame = -1 / +3
Query: 653 TCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQGRSVTEFVEACKKATGASIKVEY 474
T VRDYIDVTDLVDAHVKAL KAQ G+VGIYNVGTG+GRSV EFV+ACKKATG IKV+Y
Sbjct: 3 TRVRDYIDVTDLVDAHVKALNKAQRGRVGIYNVGTGKGRSVKEFVDACKKATGVDIKVDY 182
Query: 473 LARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLAQAWKWQKAHPNGY 327
RRPGDYAEVYSDP+KI +LNWTAQ TDL +SL AW WQKAH +GY
Sbjct: 183 FPRRPGDYAEVYSDPAKINKELNWTAQRTDLHESLRVAWTWQKAHRSGY 329
Score = 155 bits (334), Expect = 9e-037
Identities = 77/108 (71%), Positives = 82/108 (75%)
Frame = +1 / -1
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P CAFCH HA RL RSV AVQ S+ I GSLYTSA*SPGLR + STL+ PVAFL
Sbjct: 325 PLLCAFCHVHATLRLSWRSVRCAVQFSSLLILAGSLYTSA*SPGLRGK*STLMSTPVAFL 146
Query: 511 QASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQV 654
QASTNS TD P+PVPTL IPTLP AL AFT ASTRSVTSM*SLT+V
Sbjct: 145 QASTNSFTDRPFPVPTLYIPTLPLCALLSAFTWASTRSVTSM*SLTRV 2
>gb|CL172473.1|CL172473 104_375_10890187_116_31797_091 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890187, DNA
sequence
Length = 677
Score = 120 bits (256), Expect(2) = 4e-052
Identities = 47/72 (65%), Positives = 56/72 (77%)
Frame = -1 / -2
Query: 542 GRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLAQ 363
G SV EFVEACKK TG +IKVE+L RPGDYAEVYSDP+KI +L W+AQ DL +S
Sbjct: 331 GSSVKEFVEACKKDTGVNIKVEFLPCRPGDYAEVYSDPTKINRELKWSAQRNDLEESFRT 152
Query: 362 AWKWQKAHPNGY 327
AW+WQK+H +GY
Sbjct: 151 AWRWQKSHRDGY 116
Score = 107 bits (228), Expect(2) = 4e-052
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = -1 / -1
Query: 692 LKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQGRSV 531
L+VRGTDY T+DGTC+ DYIDVTDLVDAHVKAL KA P KVGI+NVGTG+GR +
Sbjct: 575 LQVRGTDYKTSDGTCIGDYIDVTDLVDAHVKALEKAHPAKVGIFNVGTGKGRFI 414
Score = 86.8 bits (183), Expect(2) = 3e-033
Identities = 42/72 (58%), Positives = 48/72 (66%)
Frame = +1 / +3
Query: 328 YPFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAF 507
YP FCH HA +L RS+ A S IF GSLYTSA*SPG + R STL+ PV+F
Sbjct: 117 YPSR*DFCHLHAVRKLSSRSLRCADHFSSRLIFVGSLYTSA*SPGRQGRNSTLMFTPVSF 296
Query: 508 LQASTNSVTDLP 543
LQASTNS T+LP
Sbjct: 297 LQASTNSFTELP 332
Score = 77.6 bits (163), Expect(2) = 3e-033
Identities = 39/54 (72%), Positives = 43/54 (79%)
Frame = +1 / +1
Query: 526 SVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRT 687
S+ +LP+PVPTL IPTL G A RAFT*ASTRSVTS+*S QVPS V *SVP T
Sbjct: 409 SIMNLPFPVPTLKIPTLAGCAFSRAFT*ASTRSVTSI*SPMQVPSLVL*SVPLT 570
>gb|CW400688.1|CW400688 fsbb001f091c02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f091c02, DNA
sequence
Length = 446
Score = 109 bits (232), Expect(2) = 2e-046
Identities = 44/56 (78%), Positives = 49/56 (87%)
Frame = -1 / +3
Query: 692 LKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQGRSVTE 525
L+V+GTDY T DGTCVRDYIDVTDLVDAHVKAL KAQ G+VGIYNVGTG+G +E
Sbjct: 24 LQVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAQRGRVGIYNVGTGKGHVSSE 191
Score = 99.1 bits (210), Expect(2) = 2e-046
Identities = 39/50 (78%), Positives = 43/50 (86%)
Frame = -1 / +3
Query: 542 GRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQ 393
GRSV EFV+ACKKATG IKV+Y RRPGDYAEVYSDP+KI +LNWTAQ
Sbjct: 297 GRSVKEFVDACKKATGVDIKVDYFPRRPGDYAEVYSDPAKINKELNWTAQ 446
Score = 78.0 bits (164), Expect(2) = 4e-030
Identities = 40/51 (78%), Positives = 41/51 (80%)
Frame = +1 / -2
Query: 541 PWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTFS 693
P+PVPTL IPTLP AL AFT ASTRSVTSM*SLTQVPS V *SVP T S
Sbjct: 175 PFPVPTLYIPTLPLCALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLTCS 23
Score = 75.8 bits (159), Expect(2) = 4e-030
Identities = 35/49 (71%), Positives = 38/49 (77%)
Frame = +1 / -2
Query: 397 AVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFLQASTNSVTDLP 543
AVQ S+ I GSLYTSA*SPGLR + STL+ PVAFLQASTNS TD P
Sbjct: 442 AVQFSSLLILAGSLYTSA*SPGLRGK*STLMSTPVAFLQASTNSFTDRP 296
>gb|CW352664.1|CW352664 fsbb001f015a20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f015a20, DNA
sequence
Length = 785
Score = 98.7 bits (209), Expect(3) = 4e-044
Identities = 39/48 (81%), Positives = 42/48 (87%)
Frame = -1 / +1
Query: 1064 RYYHNITSNTLTVLEAMAAYNVNTLIYSSTCATYGEPDTMPIVETTPQ 921
RYYHNIT+NTL VLEAMA +NV TLIYSSTCATYGEP+ MPI E TPQ
Sbjct: 322 RYYHNITANTLVVLEAMATHNVKTLIYSSTCATYGEPEKMPITEGTPQ 465
Score = 69.8 bits (146), Expect(3) = 9e-031
Identities = 35/47 (74%), Positives = 37/47 (78%)
Frame = +1 / -1
Query: 925 GVVSTIGIVSGSP*VAHVLE*IRVFTLYAAIASRTVNVFDVMLW*YL 1065
GV S +GI SGSP*VAHVLE*+RVFTL AIAS T VF VML *YL
Sbjct: 461 GVPSVMGIFSGSP*VAHVLE*MRVFTLCVAIASSTTRVFAVML**YL 321
Score = 67.5 bits (141), Expect(3) = 4e-044
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -1 / +1
Query: 1154 VKKIFSENAFDAVMHFAAVAYVGESTMEPLR 1062
V +IF+ENAFDAVMHFAAVAYVGEST+EPLR
Sbjct: 145 VNRIFAENAFDAVMHFAAVAYVGESTLEPLR 237
Score = 60.2 bits (125), Expect(3) = 9e-031
Identities = 27/32 (84%), Positives = 27/32 (84%)
Frame = +1 / -1
Query: 1060 YLSGSIVLSPT*ATAAKCITASNAFSENIFFT 1155
YL GS VLSPT*ATAAKCITASNAFS NI T
Sbjct: 239 YLRGSSVLSPT*ATAAKCITASNAFSANILLT 144
Score = 57.9 bits (120), Expect(3) = 4e-044
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = -1 / +1
Query: 923 QNPINPYGKAKKMAEDIILDFTKSKKQSNMAVMI 822
Q PINPYGKAKKMAEDIILDF+KSK+ +++
Sbjct: 604 QFPINPYGKAKKMAEDIILDFSKSKRSDMAVMIL 705
Score = 48.7 bits (100), Expect(3) = 9e-031
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +1 / -1
Query: 850 FDFVKSKMMSSAIFFALPYGLIG 918
FDF KSKM+SSAIF ALPYGLIG
Sbjct: 677 FDFEKSKMISSAIFLALPYGLIG 609
>gb|CW109338.1|CW109338 104_481_11098049_116_34505_071 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11098049, DNA
sequence
Length = 622
Score = 98.7 bits (209), Expect(3) = 1e-043
Identities = 39/48 (81%), Positives = 42/48 (87%)
Frame = -1 / -1
Query: 1064 RYYHNITSNTLTVLEAMAAYNVNTLIYSSTCATYGEPDTMPIVETTPQ 921
RYYHNIT+NTL VLEAMA +NV TLIYSSTCATYGEP+ MPI E TPQ
Sbjct: 439 RYYHNITANTLVVLEAMATHNVKTLIYSSTCATYGEPEKMPITEGTPQ 296
Score = 69.8 bits (146), Expect(3) = 4e-030
Identities = 35/47 (74%), Positives = 37/47 (78%)
Frame = +1 / +3
Query: 925 GVVSTIGIVSGSP*VAHVLE*IRVFTLYAAIASRTVNVFDVMLW*YL 1065
GV S +GI SGSP*VAHVLE*+RVFTL AIAS T VF VML *YL
Sbjct: 300 GVPSVMGIFSGSP*VAHVLE*MRVFTLCVAIASSTTRVFAVML**YL 440
Score = 65.2 bits (136), Expect(3) = 1e-043
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -1 / -1
Query: 1154 VKKIFSENAFDAVMHFAAVAYVGESTMEPLR 1062
V +IF+ENAFDAVMHFAAVAYVGEST+ PLR
Sbjct: 616 VNRIFAENAFDAVMHFAAVAYVGESTLNPLR 524
Score = 57.9 bits (120), Expect(3) = 1e-043
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = -1 / -1
Query: 923 QNPINPYGKAKKMAEDIILDFTKSKKQSNMAVMI 822
Q PINPYGKAKKMAEDIILDF+KSK+ +++
Sbjct: 157 QFPINPYGKAKKMAEDIILDFSKSKRSDMAVMIL 56
Score = 57.4 bits (119), Expect(3) = 4e-030
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = +1 / +3
Query: 1060 YLSGSIVLSPT*ATAAKCITASNAFSENIFFT 1155
YL G VLSPT*ATAAKCITASNAFS NI T
Sbjct: 522 YLRGFSVLSPT*ATAAKCITASNAFSANILLT 617
Score = 48.7 bits (100), Expect(3) = 4e-030
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +1 / +3
Query: 850 FDFVKSKMMSSAIFFALPYGLIG 918
FDF KSKM+SSAIF ALPYGLIG
Sbjct: 84 FDFEKSKMISSAIFLALPYGLIG 152
>gb|CW445100.1|CW445100 fsbb001f170a14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f170a14, DNA
sequence
Length = 662
Score = 121 bits (258), Expect(3) = 4e-039
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3 / +2
Query: 921 LRSCFYNRHRIRFTIGCTRTRVNQSIYIICCHCLKNCQCVRCYVVVVP 1064
LRSCFYNRHRIRFT+GCT TRVNQSIYI+CCHCLKNCQCV CYVVVVP
Sbjct: 116 LRSCFYNRHRIRFTVGCTCTRVNQSIYIVCCHCLKNCQCV*CYVVVVP 259
Score = 116 bits (248), Expect(3) = 3e-036
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -1 / -2
Query: 1064 RYYHNITSNTLTVLEAMAAYNVNTLIYSSTCATYGEPDTMPIVETTPQ 921
RYYHNITSNTLTVLEAMAA+NVNTLIYSSTCATYGEPDTMPIVETTPQ
Sbjct: 259 RYYHNITSNTLTVLEAMAAHNVNTLIYSSTCATYGEPDTMPIVETTPQ 116
Score = 104 bits (221), Expect(3) = 2e-025
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = -3 / -1
Query: 1065 QVLPQHNIEHIDSS*GNGSI*CKYSDLLEYVCNLW*T*YDAYCRNNSS 922
QVLPQHNI+HIDSS*GNGS CKYSDLLEY+CNL *T*YDAYCRNNSS
Sbjct: 260 QVLPQHNIKHIDSS*GNGSTQCKYSDLLEYMCNLR*T*YDAYCRNNSS 117
Score = 103 bits (219), Expect(3) = 6e-031
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +2 / +1
Query: 923 EELFLQ*ASYQVHHRLHTYSSKSEYLHYMLPLPQELSMCSMLCCGST 1063
EELFLQ*ASYQVH RLH YSSKSEYLH +LPLPQELSMC MLCCGST
Sbjct: 118 EELFLQ*ASYQVHRRLHMYSSKSEYLHCVLPLPQELSMCLMLCCGST 258
Score = 100 bits (212), Expect(2) = 3e-022
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = +1 / +3
Query: 922 *GVVSTIGIVSGSP*VAHVLE*IRVFTLYAAIASRTVNVFDVMLW*YL 1065
*GVVSTIGIVSGSP*VAHVLE*IRVFTL AAIASRTVNVFDVMLW*YL
Sbjct: 117 *GVVSTIGIVSGSP*VAHVLE*IRVFTLCAAIASRTVNVFDVMLW*YL 260
Score = 54.7 bits (113), Expect(3) = 4e-039
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3 / +2
Query: 1059 VPEWLHCALTNISNSSKVHNS 1121
+PEWLHCALTNISNSSKVHNS
Sbjct: 599 LPEWLHCALTNISNSSKVHNS 661
Score = 48.7 bits (100), Expect(3) = 3e-036
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -1 / -2
Query: 1121 AVMHFAAVAYVGESTMEPLR 1062
AVMHFAAVAYVGESTMEPLR
Sbjct: 661 AVMHFAAVAYVGESTMEPLR 602
Score = 47.8 bits (98), Expect(3) = 6e-031
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / +3
Query: 1060 YLSGSIVLSPT*ATAAKCITA 1122
YLSGSIVLSPT*ATAAKCITA
Sbjct: 600 YLSGSIVLSPT*ATAAKCITA 662
Score = 31.3 bits (62), Expect(3) = 3e-036
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 923 QNPINPYGKAK 891
QNPINPYGKAK
Sbjct: 34 QNPINPYGKAK 2
Score = 30.9 bits (61), Expect(3) = 4e-039
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 891 LCLTIWIDRILR 926
LCLTIWIDRIL+
Sbjct: 2 LCLTIWIDRILQ 37
Score = 28.1 bits (55), Expect(3) = 2e-025
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 1089 W*EHNGATQV 1060
W*EHNGATQV
Sbjct: 629 W*EHNGATQV 600
Score = 27.6 bits (54), Expect(3) = 2e-025
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -3 / -1
Query: 927 SSESYQSIW*GK 892
++ESYQSIW*GK
Sbjct: 38 TAESYQSIW*GK 3
Score = 27.6 bits (54), Expect(3) = 6e-031
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / +3
Query: 892 FALPYGLIGF 921
FALPYGLIGF
Sbjct: 3 FALPYGLIGF 32
Score = 27.2 bits (53), Expect(2) = 3e-022
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2 / +1
Query: 890 SLPYHMD**DS 922
SLPYHMD**DS
Sbjct: 1 SLPYHMD**DS 33
>gb|CW087839.1|CW087839 104_432_10947865_114_32552_005 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10947865, DNA
sequence
Length = 739
Score = 111 bits (237), Expect(3) = 2e-038
Identities = 44/45 (97%), Positives = 45/45 (100%)
Frame = -1 / -1
Query: 818 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKV 684
RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALG+IPGLKV
Sbjct: 328 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKV 194
Score = 95.0 bits (201), Expect(3) = 5e-027
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +1 / +3
Query: 685 TFSPGMIPKAASKQAPDIRPCSRSSGLGASPSRPSGSDPITLKYL 819
TF+PGM P AASK APDIRPCSRSSGLGASP+ PSGS+PITLKYL
Sbjct: 195 TFNPGMTPNAASKHAPDIRPCSRSSGLGASPNLPSGSEPITLKYL 329
Score = 59.7 bits (124), Expect(3) = 2e-038
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = -1 / -3
Query: 917 PINPYGKAKKMAEDIILDFTKSKKQSNMAVMILRYFNVI 801
PINPYGKAKKMAEDIILDF+KSK +++ YF+ +
Sbjct: 521 PINPYGKAKKMAEDIILDFSKSKGADMAVMILR*YFSAV 405
Score = 46.0 bits (94), Expect(3) = 5e-027
Identities = 24/49 (48%), Positives = 27/49 (55%)
Frame = +1 / +1
Query: 811 KYLKIMTAIFDCFFDFVKSKMMSSAIFFALPYGLIGF*GVVSTIGIVSG 957
KY + FDF KS M+SSAIF A PYGLIG * V I +G
Sbjct: 415 KYYLKIMTAMSAPFDFEKSNMISSAIFLAFPYGLIGN*AKVRDKPISTG 561
Score = 33.6 bits (67), Expect(3) = 2e-038
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1 / -2
Query: 686 VRGTDYSTADGTCV 645
V+GTDY TADGTC+
Sbjct: 42 VKGTDYPTADGTCI 1
Score = 24.9 bits (48), Expect(3) = 5e-027
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1 / +2
Query: 649 QVPSAVE*SVPRTF 690
QVPSAV *SVP T+
Sbjct: 5 QVPSAVG*SVPLTY 46
>gb|BG356594.1|BG356594 EM1_24_E01.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 463
Score = 156 bits (336), Expect = 5e-037
Identities = 62/84 (73%), Positives = 70/84 (83%)
Frame = -1 / +2
Query: 578 GKVGIYNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWT 399
G+VGIYNVGTG+GRSV EFV+ACKKATG IKV+Y RR GDYAEVYSDP+KI +LNWT
Sbjct: 5 GRVGIYNVGTGKGRSVKEFVDACKKATGVDIKVDYFPRRAGDYAEVYSDPAKINKELNWT 184
Query: 398 AQYTDLGQSLAQAWKWQKAHPNGY 327
AQ TDL +SL AW WQKAH +GY
Sbjct: 185 AQRTDLHESLRVAWTWQKAHRSGY 256
Score = 122 bits (262), Expect = 8e-027
Identities = 57/83 (68%), Positives = 61/83 (73%)
Frame = +1 / -2
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P CAFCH HA RL RSV AVQ S+ I GSLYTSA*SP LR + STL+ PVAFL
Sbjct: 252 PLLCAFCHVHATLRLSWRSVRCAVQFSSLLILAGSLYTSA*SPALRGK*STLMSTPVAFL 73
Query: 511 QASTNSVTDLPWPVPTL*IPTLP 579
QASTNS TD P+PVPTL IPTLP
Sbjct: 72 QASTNSFTDRPFPVPTLYIPTLP 4
>gb|CW249847.1|CW249847 104_711_11223065_116_35043_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223065, DNA
sequence
Length = 505
Score = 98.7 bits (209), Expect(2) = 7e-034
Identities = 39/48 (81%), Positives = 42/48 (87%)
Frame = -1 / -2
Query: 1064 RYYHNITSNTLTVLEAMAAYNVNTLIYSSTCATYGEPDTMPIVETTPQ 921
RYYHNIT+NTL VLEAMA +NV TLIYSSTCATYGEP+ MPI E TPQ
Sbjct: 276 RYYHNITANTLVVLEAMATHNVKTLIYSSTCATYGEPEKMPITEGTPQ 133
Score = 69.8 bits (146), Expect(2) = 4e-023
Identities = 35/47 (74%), Positives = 37/47 (78%)
Frame = +1 / +2
Query: 925 GVVSTIGIVSGSP*VAHVLE*IRVFTLYAAIASRTVNVFDVMLW*YL 1065
GV S +GI SGSP*VAHVLE*+RVFTL AIAS T VF VML *YL
Sbjct: 137 GVPSVMGIFSGSP*VAHVLE*MRVFTLCVAIASSTTRVFAVML**YL 277
Score = 67.5 bits (141), Expect(2) = 7e-034
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -1 / -2
Query: 1154 VKKIFSENAFDAVMHFAAVAYVGESTMEPLR 1062
V +IF+ENAFDAVMHFAAVAYVGEST+EPLR
Sbjct: 453 VNRIFAENAFDAVMHFAAVAYVGESTLEPLR 361
Score = 60.2 bits (125), Expect(2) = 4e-023
Identities = 27/32 (84%), Positives = 27/32 (84%)
Frame = +1 / +2
Query: 1060 YLSGSIVLSPT*ATAAKCITASNAFSENIFFT 1155
YL GS VLSPT*ATAAKCITASNAFS NI T
Sbjct: 359 YLRGSSVLSPT*ATAAKCITASNAFSANILLT 454
>gb|CL160781.1|CL160781 104_351_10805235_114_31824_291 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805235, DNA
sequence
Length = 632
Score = 142 bits (305), Expect = 9e-033
Identities = 52/72 (72%), Positives = 65/72 (90%)
Frame = -1 / -1
Query: 542 GRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLAQ 363
GRSV EFV+ACKKA G +IK++YL+RRPGDYA+VYSDP+KI +LNWTAQYTDL +SL+
Sbjct: 629 GRSVNEFVDACKKAIGVNIKIDYLSRRPGDYADVYSDPTKINKELNWTAQYTDLKESLSV 450
Query: 362 AWKWQKAHPNGY 327
AW+WQK+HP+GY
Sbjct: 449 AWRWQKSHPHGY 414
Score = 103 bits (219), Expect = 7e-021
Identities = 48/71 (67%), Positives = 53/71 (74%)
Frame = +1 / +1
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P GC FCH HA RL RSVY AVQL S+ IF GSLYTSA*SPGL R S L+ P+AFL
Sbjct: 418 PCGCDFCHLHATDRLSLRSVY*AVQLSSLLIFVGSLYTSA*SPGLLLR*SILMLTPIAFL 597
Query: 511 QASTNSVTDLP 543
QASTNS+T+ P
Sbjct: 598 QASTNSLTERP 630
>gb|CL172474.1|CL172474 104_375_10890187_148_31796_091 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890187, DNA
sequence
Length = 706
Score = 105 bits (224), Expect(2) = 2e-031
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = -1 / +1
Query: 818 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKV 684
RYFNVIGSDPEGRLGEAPRPELRE GRISGACFDAA GIIPGLKV
Sbjct: 382 RYFNVIGSDPEGRLGEAPRPELREQGRISGACFDAARGIIPGLKV 516
Score = 98.7 bits (209), Expect(2) = 3e-024
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = +1 / -3
Query: 685 TFSPGMIPKAASKQAPDIRPCSRSSGLGASPSRPSGSDPITLKYL 819
TF PG+IP+AASKQAPDIRPCSR+SGLGASP+ PSGSDPITLKYL
Sbjct: 515 TFKPGIIPRAASKQAPDIRPCSRNSGLGASPNLPSGSDPITLKYL 381
Score = 55.6 bits (115), Expect(2) = 2e-031
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = -1 / +1
Query: 923 QNPINPYGKAKKMAEDIILDFTKSKKQSNMAVMILRY 813
Q PINPYGKAKKMAEDIILDF+K+ + M + + Y
Sbjct: 118 QVPINPYGKAKKMAEDIILDFSKNSDMAVMILRFVFY 228
Score = 38.2 bits (77), Expect(2) = 3e-024
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +1 / -3
Query: 862 KSKMMSSAIFFALPYGLIG 918
KS+++SSAIF ALPYGLIG
Sbjct: 179 KSRIISSAIFLALPYGLIG 123
>gb|CL190299.1|CL190299 104_408_10905986_116_32502_009 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10905986, DNA
sequence
Length = 633
Score = 70.3 bits (147), Expect(3) = 7e-030
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = -1 / +2
Query: 1064 RYYHNITSNTLTVLEAMAAYNVNTLIYSSTCAT 966
RYYHNIT+NTL VLEAMA +NV TLIYSSTCAT
Sbjct: 533 RYYHNITANTLVVLEAMATHNVKTLIYSSTCAT 631
Score = 67.5 bits (141), Expect(3) = 7e-030
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -1 / +2
Query: 1154 VKKIFSENAFDAVMHFAAVAYVGESTMEPLR 1062
V +IF+ENAFDAVMHFAAVAYVGEST+EPLR
Sbjct: 356 VNRIFAENAFDAVMHFAAVAYVGESTLEPLR 448
Score = 37.3 bits (75), Expect(3) = 7e-030
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / +3
Query: 1205 EPGRLQFIYADLGDAKAV 1152
EPGRLQFI ADLGD +AV
Sbjct: 150 EPGRLQFIQADLGDPEAV 203
>gb|CF489211.1|CF489211 POL1_55_A05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_55_A05_A002 5', mRNA sequence
Length = 639
Score = 119 bits (254), Expect(2) = 3e-029
Identities = 50/123 (40%), Positives = 71/123 (57%)
Frame = -1 / +2
Query: 1193 LQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAM 1014
L F D+ D ++K+F+ FDAV+HFA + VGES +PL YY + T+ +LE M
Sbjct: 224 LAFHKVDIRDKDGLEKVFASTRFDAVIHFAGLKAVGESVQKPLLYYDHNVVGTINLLEVM 403
Query: 1013 AAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKSKKQSNM 834
AA+ L++SS+ A YG P P E P P NPYG+ K MAE+I D S + N+
Sbjct: 404 AAHGCKKLVFSSSAAVYGSPKNSPCTEDFPLTPHNPYGRTKLMAEEICRDIYHSDPEWNI 583
Query: 833 AVM 825
++
Sbjct: 584 ILL 592
Score = 31.3 bits (62), Expect(2) = 3e-029
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1 / +2
Query: 830 VMILRYFNVIGSDPEGRLG 774
+++LRYFN +G+ P G LG
Sbjct: 581 IILLRYFNPVGAHPSGYLG 637
>gb|BG557554.1|BG557554 EM1_54_H11.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 466
Score = 113 bits (242), Expect(2) = 3e-029
Identities = 47/108 (43%), Positives = 63/108 (58%)
Frame = -1 / +2
Query: 1175 DLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAMAAYNVN 996
DL D ++ +F+ FDAV+HFA + VGES +PL YY N T+ +LE M+A+
Sbjct: 26 DLRDKGTLEMVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVIGTINLLEVMSAHGCK 205
Query: 995 TLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKS 852
L++SS+ A YG P P E P P NPYGK K + EDI D +S
Sbjct: 206 KLVFSSSAAVYGSPRNSPCTEEFPLTPNNPYGKTKLVVEDICRDIYRS 349
Score = 36.8 bits (74), Expect(2) = 3e-029
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1 / +2
Query: 827 MILRYFNVIGSDPEGRLGEAPR 762
++LRYFN +G+ P G LGE PR
Sbjct: 368 ILLRYFNPVGAHPSGYLGEDPR 433
>gb|CW087840.1|CW087840 104_432_10947865_116_32556_005 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10947865, DNA
sequence
Length = 675
Score = 97.7 bits (207), Expect(2) = 6e-028
Identities = 38/48 (79%), Positives = 42/48 (87%)
Frame = -1 / +3
Query: 1064 RYYHNITSNTLTVLEAMAAYNVNTLIYSSTCATYGEPDTMPIVETTPQ 921
RYYHNITSNTL +LEAMA++ V TLIYSSTCATYGEP+ MPI E TPQ
Sbjct: 243 RYYHNITSNTLLILEAMASHGVKTLIYSSTCATYGEPEKMPITEATPQ 386
Score = 51.5 bits (106), Expect(2) = 6e-028
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -1 / +2
Query: 917 PINPYGKAKKMAEDIILDFTK 855
PINPYGKAKKMAEDIILDF+K
Sbjct: 611 PINPYGKAKKMAEDIILDFSK 673
>gb|CN147262.1|CN147262 WOUND1_48_D07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_48_D07_A002 5', mRNA sequence
Length = 820
Score = 109 bits (233), Expect(2) = 2e-027
Identities = 50/114 (43%), Positives = 67/114 (58%)
Frame = -1 / +2
Query: 1193 LQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAM 1014
L F DL D A+++IFS + F+AV+HFA + VGES +PL YY N T+T+LE M
Sbjct: 362 LVFHKVDLRDRHALEEIFSSHRFEAVIHFAGLKAVGESVHKPLLYYDNNLIGTITLLEVM 541
Query: 1013 AAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKS 852
AA L++SS+ YG P +P E P NPYG+ K + EDI D +S
Sbjct: 542 AANGCKKLVFSSSATVYGWPMEVPCTEEFPLCATNPYGRTKLVIEDICRDVHRS 703
Score = 35.0 bits (70), Expect(2) = 2e-027
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -1 / +2
Query: 830 VMILRYFNVIGSDPEGRLGEAP 765
+++LRYFN +G+ P G +GE P
Sbjct: 719 IILLRYFNPVGAHPSGYIGEDP 784
>gb|CD233682.1|CD233682 SS1_3_B09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_3_B09_A012 5', mRNA sequence
Length = 671
Score = 124 bits (266), Expect = 2e-027
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = -1 / +1
Query: 1205 EPGRLQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTV 1026
EPGRLQFI ADLGD +AV +IF+ENAFDAVMHFAAVAYVGEST+EPLRYYHNIT+ TL V
Sbjct: 487 EPGRLQFIQADLGDPEAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITAXTLVV 666
Query: 1025 L 1023
L
Sbjct: 667 L 669
>gb|CW300248.1|CW300248 104_783_11463552_148_36251_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11463552, DNA
sequence
Length = 624
Score = 107 bits (229), Expect(2) = 3e-027
Identities = 42/49 (85%), Positives = 46/49 (93%)
Frame = -1 / +1
Query: 686 VRGTDYSTADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQG 540
V+GTDY TADGTC+RDYIDVTDLVDAHVKAL KA+P KVGIYNVGTG+G
Sbjct: 208 VKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRG 354
Score = 39.1 bits (79), Expect(2) = 3e-027
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / +3
Query: 737 ISGACFDAALGIIPGLKV 684
ISGACF ALG+IPGLKV
Sbjct: 3 ISGACFSPALGVIPGLKV 56
>gb|CD432207.1|CD432207 ETH1_26_G11.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_26_G11_A002 5', mRNA sequence
Length = 788
Score = 110 bits (234), Expect(2) = 3e-026
Identities = 50/114 (43%), Positives = 67/114 (58%)
Frame = -1 / +1
Query: 1193 LQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAM 1014
L F DL D A+++IFS + F+AV+HFA + VGES +PL YY N T+T+LE M
Sbjct: 373 LVFHKVDLRDRHALEEIFSSHRFEAVIHFAGLKAVGESVHKPLLYYDNNLIGTITLLEVM 552
Query: 1013 AAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKS 852
AA L++SS+ YG P +P E P NPYG+ K + EDI D +S
Sbjct: 553 AANGCKKLVFSSSATVYGCPKEVPCTEEFPLCATNPYGRTKLVIEDICRDVHRS 714
Score = 30.4 bits (60), Expect(2) = 3e-026
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -1 / +1
Query: 830 VMILRYFNVIGSDPEGRLG 774
+++LRYFN +G+ P G +G
Sbjct: 730 IILLRYFNPVGAHPSGYIG 786
>gb|BG560333.1|BG560333 RHIZ2_73_B06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 574
Score = 110 bits (235), Expect(2) = 2e-025
Identities = 50/114 (43%), Positives = 67/114 (58%)
Frame = -1 / +3
Query: 1193 LQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAM 1014
L F DL D A+++IFS + F+AV+HFA + VGES +PL YY N T+T+LE M
Sbjct: 165 LVFHKVDLRDRHALEEIFSSHRFEAVIHFAGLKAVGESVHKPLLYYDNNLIGTITLLEVM 344
Query: 1013 AAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKS 852
AA L++SS+ YG P +P E P NPYG+ K + EDI D +S
Sbjct: 345 AANGCKKLVFSSSATVYGWPKEVPCTEEFPLCATNPYGRTKLVIEDICRDVHRS 506
Score = 27.6 bits (54), Expect(2) = 2e-025
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -1 / +3
Query: 830 VMILRYFNVIGSDPEG 783
+++LRYFN +G+ P G
Sbjct: 522 IILLRYFNPVGAHPSG 569
>gb|CN147179.1|CN147179 WOUND1_48_D07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_48_D07_A002 3', mRNA sequence
Length = 743
Score = 68.0 bits (142), Expect(3) = 1e-024
Identities = 27/59 (45%), Positives = 38/59 (64%)
Frame = -1 / +1
Query: 566 IYNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQY 390
+YN+GTG+G SV E V A +K +G I + + RRPGD VY++ +K DL W A+Y
Sbjct: 196 VYNLGTGKGTSVLEMVAAFEKVSGKKIPLVFAGRRPGDAEIVYAETAKAEKDLKWKAKY 372
Score = 62.0 bits (129), Expect(3) = 1e-024
Identities = 26/42 (61%), Positives = 30/42 (71%)
Frame = -1 / +1
Query: 713 ALGIIPGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGK 588
A+G +P L V GTDY+T DGT VRDYI V DL D H+ AL K
Sbjct: 37 AVGRLPHLTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRK 162
Score = 23.1 bits (44), Expect(3) = 1e-024
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = -1 / +1
Query: 359 WKWQKAHPNGYASA 318
W W +P GYA +
Sbjct: 400 WNWASKNPYGYAGS 441
>gb|CX615956.1|CX615956 GABR1_25_A05.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_25_A05_A002 3', mRNA sequence
Length = 719
Score = 66.1 bits (138), Expect(3) = 1e-023
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = -1 / +3
Query: 566 IYNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQY 390
+YN+GTG+G SV E V A +K +G I + + RRPGD VY+ +K DL W A+Y
Sbjct: 159 VYNLGTGKGTSVLEMVAAFEKVSGKKIPLVFAGRRPGDAEIVYAATAKAEKDLKWKAKY 335
Score = 60.2 bits (125), Expect(3) = 1e-023
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = -1 / +3
Query: 710 LGIIPGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGK 588
+G +P L V GTDY+T DGT VRDYI V DL D H+ AL K
Sbjct: 3 VGRLPHLTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRK 125
Score = 23.1 bits (44), Expect(3) = 1e-023
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = -1 / +3
Query: 359 WKWQKAHPNGYASA 318
W W +P GYA +
Sbjct: 363 WNWASKNPYGYAGS 404
>gb|BG560363.1|BG560363 RHIZ2_73_E06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 566
Score = 110 bits (235), Expect = 4e-023
Identities = 50/114 (43%), Positives = 67/114 (58%)
Frame = -1 / +3
Query: 1193 LQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAM 1014
L F DL D A+++IFS + F+AV+HFA + VGES +PL YY N T+T+LE M
Sbjct: 165 LVFHKVDLRDRHALEEIFSSHRFEAVIHFAGLKAVGESVHKPLLYYDNNLIGTITLLEVM 344
Query: 1013 AAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKS 852
AA L++SS+ YG P +P E P NPYG+ K + EDI D +S
Sbjct: 345 AANGCKKLVFSSSATVYGWPKEVPCTEEFPLCATNPYGRTKLVIEDICRDVHRS 506
>gb|BM325263.1|BM325263 PIC1_42_D10.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 560
Score = 110 bits (235), Expect = 4e-023
Identities = 50/114 (43%), Positives = 67/114 (58%)
Frame = -1 / +3
Query: 1193 LQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAM 1014
L F DL D A+++IFS + F+AV+HFA + VGES +PL YY N T+T+LE M
Sbjct: 174 LVFHKVDLRDRHALEEIFSSHRFEAVIHFAGLKAVGESVHKPLLYYDNNLIGTITLLEVM 353
Query: 1013 AAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKS 852
AA L++SS+ YG P +P E P NPYG+ K + EDI D +S
Sbjct: 354 AANGCKKLVFSSSATVYGWPKEVPCTEEFPLCATNPYGRTKLVIEDICRDVHRS 515
>gb|CN149722.1|CN149722 WOUND1_64_B06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_64_B06_A002 5', mRNA sequence
Length = 755
Score = 110 bits (235), Expect = 4e-023
Identities = 50/114 (43%), Positives = 67/114 (58%)
Frame = -1 / +1
Query: 1193 LQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAM 1014
L F DL D A+++IFS + F+AV+HFA + VGES +PL YY N T+T+LE M
Sbjct: 367 LVFHKVDLRDRHALEEIFSSHRFEAVIHFAGLKAVGESVHKPLLYYDNNLIGTITLLEVM 546
Query: 1013 AAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKS 852
AA L++SS+ YG P +P E P NPYG+ K + EDI D +S
Sbjct: 547 AANGCKKLVFSSSATVYGWPKEVPCTEEFPLCATNPYGRTKLVIEDICRDVHRS 708
>gb|CD207582.1|CD207582 HS1_33_C08.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_33_C08_A012 5', mRNA sequence
Length = 721
Score = 109 bits (232), Expect = 1e-022
Identities = 49/110 (44%), Positives = 65/110 (59%)
Frame = -1 / +2
Query: 1193 LQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAM 1014
L F DL D A+++IFS + F+AV+HFA + VGES +PL YY N T+T+LE M
Sbjct: 383 LVFHKVDLRDRHALEEIFSSHRFEAVIHFAGLKAVGESVHKPLLYYDNNLIGTITLLEVM 562
Query: 1013 AAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILD 864
AA L++SS+ YG P +P E P NPYG+ K + EDI D
Sbjct: 563 AANGCKKLVFSSSATVYGWPKEVPCTEEFPLCATNPYGRTKLVIEDICRD 712
>gb|CD208040.1|CD208040 HS1_36_D12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_36_D12_A012 5', mRNA sequence
Length = 708
Score = 109 bits (232), Expect = 1e-022
Identities = 49/110 (44%), Positives = 65/110 (59%)
Frame = -1 / +2
Query: 1193 LQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAM 1014
L F DL D A+++IFS + F+AV+HFA + VGES +PL YY N T+T+LE M
Sbjct: 374 LVFHKVDLRDRHALEEIFSSHRFEAVIHFAGLKAVGESVHKPLLYYDNNLIGTITLLEVM 553
Query: 1013 AAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILD 864
AA L++SS+ YG P +P E P NPYG+ K + EDI D
Sbjct: 554 AANGCKKLVFSSSATVYGWPKEVPCTEEFPLCATNPYGRTKLVIEDICRD 703
>gb|CF427115.1|CF427115 PH1_3_F11.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_3_F11_A002 5', mRNA sequence
Length = 494
Score = 109 bits (232), Expect = 1e-022
Identities = 49/110 (44%), Positives = 65/110 (59%)
Frame = -1 / +2
Query: 1193 LQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAM 1014
L F DL D A+++IFS + F+AV+HFA + VGES +PL YY N T+T+LE M
Sbjct: 158 LVFHKVDLRDRHALEEIFSSHRFEAVIHFAGLKAVGESVHKPLLYYDNNLIGTITLLEVM 337
Query: 1013 AAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILD 864
AA L++SS+ YG P +P E P NPYG+ K + EDI D
Sbjct: 338 AANGCKKLVFSSSATVYGWPKEVPCTEEFPLCATNPYGRTKLVIEDICRD 487
>gb|AW284262.1|AW284262 LG1_268_G06.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 439
Score = 107 bits (229), Expect = 3e-022
Identities = 42/59 (71%), Positives = 47/59 (79%)
Frame = -1 / +3
Query: 503 ATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLAQAWKWQKAHPNGY 327
ATG IKV+Y RRPGDYAEVYSDP+KI +LNWTAQ TDL +SL AW WQKAH +GY
Sbjct: 3 ATGVDIKVDYFPRRPGDYAEVYSDPAKINKELNWTAQRTDLHESLRVAWTWQKAHRSGY 179
>gb|CD204270.1|CD204270 HS1_4_G11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_4_G11_A012 5', mRNA sequence
Length = 724
Score = 107 bits (229), Expect = 3e-022
Identities = 48/107 (44%), Positives = 64/107 (59%)
Frame = -1 / +1
Query: 1193 LQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAM 1014
L F DL D A+++IFS + F+AV+HFA + VGES +PL YY N T+T+LE M
Sbjct: 367 LVFHKVDLRDRHALEEIFSSHRFEAVIHFAGLKAVGESVHKPLLYYDNNLIGTITLLEVM 546
Query: 1013 AAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDI 873
AA L++SS+ YG P +P E P NPYG+ K + EDI
Sbjct: 547 AANGCKKLVFSSSATVYGWPKEVPCTEEFPLCATNPYGRTKLVIEDI 687
>gb|CX620652.1|CX620652 GABR1_53_D12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_53_D12_A002 3', mRNA sequence
Length = 719
Score = 66.1 bits (138), Expect(3) = 5e-022
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = -1 / +2
Query: 566 IYNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQY 390
+YN+GTG+G SV E V A +K +G I + + RRPGD VY+ +K DL W A+Y
Sbjct: 128 VYNLGTGKGTSVLEMVAAFEKVSGKKIPLVFAGRRPGDAEIVYAATAKAEKDLKWKAKY 304
Score = 54.7 bits (113), Expect(3) = 5e-022
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = -1 / +2
Query: 680 GTDYSTADGTCVRDYIDVTDLVDAHVKALGK 588
GTDY+T DGT VRDYI V DLVD H+ AL K
Sbjct: 2 GTDYNTKDGTGVRDYIHVVDLVDGHIAALRK 94
Score = 23.1 bits (44), Expect(3) = 5e-022
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = -1 / +2
Query: 359 WKWQKAHPNGYASA 318
W W +P GYA +
Sbjct: 332 WNWASKNPYGYAGS 373
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,395,829,737
Number of Sequences: 832831
Number of extensions: 19689804
Number of successful extensions: 112390
Number of sequences better than 1.0e-020: 54
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 41175316999
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)