TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3064721.2.1
         (689 letters)

Database: Sorghum_nucl_with_EST.fasta 
           832,831 sequences; 491,359,669 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CN149194.1|CN149194  WOUND1_61_F10.b1_A002 Wounded leaves...   105   7e-045
gb|CF487333.1|CF487333  POL1_43_D11.b1_A002 Pollen Sorghum b...   104   5e-044
gb|CF070980.1|CF070980  FE1_14_F12.g1_A002 Iron-deficient se...   100   1e-042
gb|BF587532.1|BF587532  FM1_37_E11.g1_A003 Floral-Induced Me...    92   2e-040
gb|BM329584.1|BM329584  PIC1_40_E09.g1_A002 Pathogen-infecte...    78   2e-040
gb|CW144377.1|CW144377  104_536_11137911_148_34962_056 Sorgh...    67   4e-039
gb|CN140420.1|CN140420  OX1_36_B10.b1_A002 Oxidatively-stres...   105   1e-036
gb|BG101797.1|BG101797  RHIZ2_22_E09.g1_A003 Rhizome2 (RHIZ2...    79   3e-036
gb|CN127460.1|CN127460  RHOH1_23_D06.b1_A002 Acid- and alkal...   100   6e-036
gb|CX612893.1|CX612893  GABR1_5_C04.b1_A002 GA- or brassinol...   100   6e-036
gb|CD234655.1|CD234655  SS1_17_C07.b1_A012 Salt-stressed see...    90   8e-033
gb|BI139893.1|BI139893  IP1_47_A12.b1_A002 Immature pannicle...    61   3e-028
gb|BM331533.1|BM331533  PIC1_72_D10.g1_A002 Pathogen-infecte...    61   5e-027
gb|CW285991.1|CW285991  104_763_11410641_116_35511_039 Sorgh...    67   1e-026
>gb|CN149194.1|CN149194 WOUND1_61_F10.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
           WOUND1_61_F10_A002 3', mRNA sequence
          Length = 807

 Score =  105 bits (225), Expect(3) = 7e-045
 Identities = 37/58 (63%), Positives = 44/58 (75%)
 Frame = +2 / +2

                                                                     
Query: 2   HACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
           +ACGWAYGMN FDL  WR++  TE YH WQ  NENR LWKLGTLP GL+TF++  + L
Sbjct: 179 NACGWAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPL 352

 Score = 72.5 bits (152), Expect(2) = 1e-021
 Identities = 30/50 (60%), Positives = 33/50 (66%)
 Frame = -3 / -1

                                                             
Query: 153 KVTRPAGRVPSFHNSLFSFNFCQVW*TSVMFCFLHPDKSNMFMPYAQPQA 4
           KV +P G VPSFHN  FSF FCQ W  SV F  L   +S  F+PYAQPQA
Sbjct: 330 KVIKPGGSVPSFHNVRFSF*FCQ*WYCSVHFSLLQESRSKKFIPYAQPQA 181

 Score = 69.8 bits (146), Expect(3) = 7e-045
 Identities = 24/37 (64%), Positives = 32/37 (86%)
 Frame = +1 / +2

                                                
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
           T PL+RSWH LGLGYNP+++ ++IR A V+HFNGN+K
Sbjct: 341 TKPLERSWHVLGLGYNPSISMEEIRNAAVVHFNGNMK 451

 Score = 51.5 bits (106), Expect(2) = 1e-021
 Identities = 24/49 (48%), Positives = 27/49 (55%)
 Frame = -1 / -1

                                                            
Query: 311 CGIWAIQSQARSFKFPLKWMTVARLISFSLTFGLYPSPS*CHERSRGNV 165
           C  W I   ++ F  PLK  T A LIS  L  GLYPSP  C + SRG V
Sbjct: 486 CLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYPSPRTCQDLSRGFV 340

 Score = 44.6 bits (91), Expect(3) = 7e-045
 Identities = 12/31 (38%), Positives = 23/31 (74%)
 Frame = +2 / +2

                                          
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNINP 373
           WL+IG+ ++R  W+ +V+YD  ++++CN  P
Sbjct: 455 WLDIGMNQFRHLWTKYVDYDDSYIRQCNFAP 547
>gb|CF487333.1|CF487333 POL1_43_D11.b1_A002 Pollen Sorghum bicolor cDNA clone
           POL1_43_D11_A002 3', mRNA sequence
          Length = 661

 Score =  104 bits (222), Expect(3) = 5e-044
 Identities = 36/52 (69%), Positives = 45/52 (86%)
 Frame = +2 / +2

                                                               
Query: 2   HACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFW 157
           +ACGWAYGMN+FDL  W+K++IT +YH WQ LNE+R LWKLGTLP GL+TF+
Sbjct: 41  NACGWAYGMNIFDLREWKKKDITGIYHKWQNLNEDRALWKLGTLPPGLLTFY 196

 Score = 66.6 bits (139), Expect(3) = 5e-044
 Identities = 22/37 (59%), Positives = 30/37 (81%)
 Frame = +1 / +2

                                                
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
           T PLD+SWH LGLGYNP+++  +I  A V+H+NGN+K
Sbjct: 203 THPLDKSWHVLGLGYNPSIDRSEIDSAAVVHYNGNMK 313

 Score = 46.4 bits (95), Expect(3) = 5e-044
 Identities = 12/30 (40%), Positives = 22/30 (73%)
 Frame = +2 / +2

                                         
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNIN 370
           WLE+ + KYR YW+ ++ YD  +++ CN++
Sbjct: 317 WLELAMTKYRPYWTKYIKYDHPYIRGCNLS 406
>gb|CF070980.1|CF070980 FE1_14_F12.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
           clone FE1_14_F12_A002 5', mRNA sequence
          Length = 692

 Score =  100 bits (212), Expect(3) = 1e-042
 Identities = 36/58 (62%), Positives = 43/58 (74%)
 Frame = +2 / -1

                                                                     
Query: 2   HACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
           +ACG AYGMN FDL  WR++  TE YH WQ  NENR LWKLGTLP GL+TF++  + L
Sbjct: 671 NACGGAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPL 498

 Score = 68.4 bits (143), Expect(3) = 1e-042
 Identities = 23/37 (62%), Positives = 32/37 (86%)
 Frame = +1 / -1

                                                
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
           T PL++SWH LGLGYNP+++ ++IR A V+HFNGN+K
Sbjct: 509 TKPLEKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMK 399

 Score = 44.6 bits (91), Expect(3) = 1e-042
 Identities = 12/31 (38%), Positives = 23/31 (74%)
 Frame = +2 / -1

                                          
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNINP 373
           WL+IG+ ++R  W+ +V+YD  ++++CN  P
Sbjct: 395 WLDIGMNQFRHLWTKYVDYDDSYIRQCNFAP 303
>gb|BF587532.1|BF587532 FM1_37_E11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
           propinquum cDNA, mRNA sequence
          Length = 632

 Score = 92.3 bits (195), Expect(3) = 2e-040
 Identities = 33/53 (62%), Positives = 39/53 (73%)
 Frame = +2 / +1

                                                                
Query: 17  AYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
           AYGMN FDL  WR++  TE YH WQ  NENR LWKLGTLP GL+TF++  + L
Sbjct: 1   AYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPXGLITFYSTTKPL 159

 Score = 68.4 bits (143), Expect(3) = 2e-040
 Identities = 23/37 (62%), Positives = 32/37 (86%)
 Frame = +1 / +1

                                                
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
           T PL++SWH LGLGYNP+++ ++IR A V+HFNGN+K
Sbjct: 148 TKPLEKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMK 258

 Score = 44.6 bits (91), Expect(3) = 2e-040
 Identities = 12/31 (38%), Positives = 23/31 (74%)
 Frame = +2 / +1

                                          
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNINP 373
           WL+IG+ ++R  W+ +V+YD  ++++CN  P
Sbjct: 262 WLDIGMNQFRHLWTKYVDYDDSYIRQCNFAP 354
>gb|BM329584.1|BM329584 PIC1_40_E09.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
           bicolor cDNA, mRNA sequence
          Length = 628

 Score = 78.0 bits (164), Expect(3) = 2e-040
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = +1 / +3

                                                
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
           TFPL RSWH LGLGYNP+VN +DI RA VIH+NGN+K
Sbjct: 78  TFPLSRSWHVLGLGYNPHVNSRDIERAAVIHYNGNMK 188

 Score = 70.7 bits (148), Expect(3) = 2e-040
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = +2 / +3

                                           
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNINP* 376
           WLEIGLPKYR YWS +++YDQ FL+ECNINP*
Sbjct: 192 WLEIGLPKYRSYWSKYLDYDQSFLRECNINP* 287

 Score = 56.5 bits (117), Expect(3) = 2e-040
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +2 / +3

                                    
Query: 89  QKLNENRLLWKLGTLPAGLVTFWNR 163
           QKLNE+R LWKLGTLP GL+TFWN+
Sbjct: 3   QKLNEDRSLWKLGTLPPGLITFWNK 77
>gb|CW144377.1|CW144377 104_536_11137911_148_34962_056 Sorghum methylation filtered library
           (LibID: 104) Sorghum bicolor genomic clone 11137911, DNA
           sequence
          Length = 622

 Score = 66.6 bits (139), Expect(4) = 4e-039
 Identities = 22/37 (59%), Positives = 30/37 (81%)
 Frame = +1 / +2

                                                
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
           T PLD+SWH LGLGYNP+++  +I  A V+H+NGN+K
Sbjct: 344 THPLDKSWHVLGLGYNPSIDRSEIDSAAVVHYNGNMK 454

 Score = 65.7 bits (137), Expect(4) = 4e-039
 Identities = 21/32 (65%), Positives = 27/32 (84%)
 Frame = +2 / +2

                                           
Query: 2   HACGWAYGMNMFDLSGWRKQNITEVYHTWQKL 97
           +ACGWAYGMN+FDL  W+K++IT +YH WQ L
Sbjct: 47  NACGWAYGMNIFDLREWKKKDITGIYHKWQNL 142

 Score = 46.4 bits (95), Expect(4) = 4e-039
 Identities = 12/30 (40%), Positives = 22/30 (73%)
 Frame = +2 / +2

                                         
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNIN 370
           WLE+ + KYR YW+ ++ YD  +++ CN++
Sbjct: 458 WLELAMTKYRPYWTKYIKYDHPYIRGCNLS 547

 Score = 41.8 bits (85), Expect(4) = 4e-039
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +2 / +2

                               
Query: 98  NENRLLWKLGTLPAGLVTFW 157
           NE+R LWKLGTLP GL+TF+
Sbjct: 278 NEDRALWKLGTLPPGLLTFY 337
>gb|CN140420.1|CN140420 OX1_36_B10.b1_A002 Oxidatively-stressed leaves and roots Sorghum
           bicolor cDNA clone OX1_36_B10_A002 3', mRNA sequence
          Length = 836

 Score =  105 bits (225), Expect(2) = 1e-036
 Identities = 37/58 (63%), Positives = 44/58 (75%)
 Frame = +2 / +3

                                                                     
Query: 2   HACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
           +ACGWAYGMN FDL  WR++  TE YH WQ  NENR LWKLGTLP GL+TF++  + L
Sbjct: 282 NACGWAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPL 455

 Score = 72.5 bits (152), Expect(2) = 2e-021
 Identities = 30/50 (60%), Positives = 33/50 (66%)
 Frame = -3 / -2

                                                             
Query: 153 KVTRPAGRVPSFHNSLFSFNFCQVW*TSVMFCFLHPDKSNMFMPYAQPQA 4
           KV +P G VPSFHN  FSF FCQ W  SV F  L   +S  F+PYAQPQA
Sbjct: 433 KVIKPGGSVPSFHNVRFSF*FCQ*WYCSVHFSLLQESRSKKFIPYAQPQA 284

 Score = 68.4 bits (143), Expect(2) = 1e-036
 Identities = 23/37 (62%), Positives = 32/37 (86%)
 Frame = +1 / +3

                                                
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
           T PL++SWH LGLGYNP+++ ++IR A V+HFNGN+K
Sbjct: 444 TKPLEKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMK 554

 Score = 51.0 bits (105), Expect(2) = 2e-021
 Identities = 24/49 (48%), Positives = 27/49 (55%)
 Frame = -1 / -2

                                                            
Query: 311 CGIWAIQSQARSFKFPLKWMTVARLISFSLTFGLYPSPS*CHERSRGNV 165
           C  W I   ++ F  PLK  T A LIS  L  GLYPSP  C + SRG V
Sbjct: 589 CLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYPSPRTCQDFSRGFV 443
>gb|BG101797.1|BG101797 RHIZ2_22_E09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
           sequence
          Length = 591

 Score = 79.0 bits (166), Expect(3) = 3e-036
 Identities = 27/41 (65%), Positives = 34/41 (82%)
 Frame = +2 / +3

                                                    
Query: 35  FDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFW 157
           FDL  W+ ++IT +YH WQ +NENRLLWKLGTLP GL+TF+
Sbjct: 3   FDLEEWKNKDITGIYHKWQNMNENRLLWKLGTLPPGLLTFY 125

 Score = 66.6 bits (139), Expect(3) = 3e-036
 Identities = 23/37 (62%), Positives = 28/37 (75%)
 Frame = +1 / +3

                                                
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
           T PLD+SWH LGLGYNP +   +I  A VIH+NGN+K
Sbjct: 132 THPLDKSWHVLGLGYNPTIERSEIDNAAVIHYNGNMK 242

 Score = 46.0 bits (94), Expect(3) = 3e-036
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2 / +3

                                         
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNIN 370
           WLEI + KYR YW+ ++NY+  ++  C I+
Sbjct: 246 WLEIAMTKYRPYWTKYINYEHPYIHGCKIS 335
>gb|CN127460.1|CN127460 RHOH1_23_D06.b1_A002 Acid- and alkaline-treated roots Sorghum
           bicolor cDNA clone RHOH1_23_D06_A002 3', mRNA sequence
          Length = 814

 Score =  100 bits (212), Expect(3) = 6e-036
 Identities = 34/58 (58%), Positives = 44/58 (75%)
 Frame = +2 / +1

                                                                     
Query: 2   HACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
           H CGWA+GMN+FDL  WRK+N T +YH WQ+ N + LLW+ GTLPAGL+TF+  +  L
Sbjct: 112 HTCGWAFGMNIFDLIAWRKENATSLYHYWQEQNSDLLLWRTGTLPAGLLTFYGLMEPL 285

 Score = 57.4 bits (119), Expect(3) = 6e-036
 Identities = 19/35 (54%), Positives = 28/35 (80%)
 Frame = +1 / +1

                                              
Query: 172 PLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
           PLDR WH LGLGY+ +++++ I  A V+H+NGN+K
Sbjct: 280 PLDRRWHVLGLGYDVDIDDRLIESAAVVHYNGNMK 384

 Score = 32.7 bits (65), Expect(3) = 6e-036
 Identities = 8/30 (26%), Positives = 19/30 (63%)
 Frame = +2 / +1

                                         
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNIN 370
           WL++ + +Y+  W  +VN    +++EC ++
Sbjct: 388 WLKLAIRRYKYIWERYVNISHPYVRECMLH 477
>gb|CX612893.1|CX612893 GABR1_5_C04.b1_A002 GA- or brassinolide-treated seedlings Sorghum
           bicolor cDNA clone GABR1_5_C04_A002 3', mRNA sequence
          Length = 762

 Score =  100 bits (212), Expect(3) = 6e-036
 Identities = 34/58 (58%), Positives = 44/58 (75%)
 Frame = +2 / +1

                                                                     
Query: 2   HACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
           H CGWA+GMN+FDL  WRK+N T +YH WQ+ N + LLW+ GTLPAGL+TF+  +  L
Sbjct: 70  HTCGWAFGMNIFDLIAWRKENATSLYHYWQEQNSDLLLWRTGTLPAGLLTFYGLMEPL 243

 Score = 57.4 bits (119), Expect(3) = 6e-036
 Identities = 19/35 (54%), Positives = 28/35 (80%)
 Frame = +1 / +1

                                              
Query: 172 PLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
           PLDR WH LGLGY+ +++++ I  A V+H+NGN+K
Sbjct: 238 PLDRRWHVLGLGYDVDIDDRLIESAAVVHYNGNMK 342

 Score = 32.7 bits (65), Expect(3) = 6e-036
 Identities = 8/30 (26%), Positives = 19/30 (63%)
 Frame = +2 / +1

                                         
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNIN 370
           WL++ + +Y+  W  +VN    +++EC ++
Sbjct: 346 WLKLAIRRYKYIWERYVNISHPYVRECMLH 435
>gb|CD234655.1|CD234655 SS1_17_C07.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
           clone SS1_17_C07_A012 3', mRNA sequence
          Length = 683

 Score = 89.5 bits (189), Expect(3) = 8e-033
 Identities = 31/54 (57%), Positives = 41/54 (75%)
 Frame = +2 / +3

                                                                 
Query: 14  WAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
           WA+GMN+FDL  WRK+N T +YH WQ+ N + LLW+ GTLPAGL+TF+  +  L
Sbjct: 3   WAFGMNIFDLIAWRKENATSLYHYWQEQNSDLLLWRTGTLPAGLLTFYGLMEPL 164

 Score = 57.4 bits (119), Expect(3) = 8e-033
 Identities = 19/35 (54%), Positives = 28/35 (80%)
 Frame = +1 / +3

                                              
Query: 172 PLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
           PLDR WH LGLGY+ +++++ I  A V+H+NGN+K
Sbjct: 159 PLDRRWHVLGLGYDVDIDDRLIESAAVVHYNGNMK 263

 Score = 32.7 bits (65), Expect(3) = 8e-033
 Identities = 8/30 (26%), Positives = 19/30 (63%)
 Frame = +2 / +3

                                         
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNIN 370
           WL++ + +Y+  W  +VN    +++EC ++
Sbjct: 267 WLKLAIRRYKYIWERYVNISHPYVRECMLH 356
>gb|BI139893.1|BI139893 IP1_47_A12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
           mRNA sequence
          Length = 598

 Score = 61.1 bits (127), Expect(4) = 3e-028
 Identities = 20/31 (64%), Positives = 23/31 (74%)
 Frame = +2 / +2

                                          
Query: 8   CGWAYGMNMFDLSGWRKQNITEVYHTWQKLN 100
           C WAYGMN+FDL+ WRK NI + YH W K N
Sbjct: 197 CAWAYGMNIFDLAAWRKTNIRDTYHFWLKEN 289

 Score = 52.8 bits (109), Expect(4) = 3e-028
 Identities = 19/38 (50%), Positives = 24/38 (63%)
 Frame = +1 / +2

                                                 
Query: 163 HTFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
           H   +D SWH LGLGY    + + +RRA VIH+NG  K
Sbjct: 356 HVHGIDPSWHLLGLGYQDKTDIESVRRAAVIHYNGQCK 469

 Score = 37.7 bits (76), Expect(4) = 3e-028
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2 / +2

                                        
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNI 367
           WL+I     + +W+ HVNY   F++ C+I
Sbjct: 473 WLDIAFKNLQPFWTKHVNYSXDFVRNCHI 559

 Score = 29.9 bits (59), Expect(4) = 3e-028
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2 / +2

                                        
Query: 89  QKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
           + L     LWK GTLP  L+ F   +  +
Sbjct: 284 ENLKSGLTLWKFGTLPPALIAFRGHVHGI 370
>gb|BM331533.1|BM331533 PIC1_72_D10.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
           bicolor cDNA, mRNA sequence
          Length = 596

 Score = 61.1 bits (127), Expect(3) = 5e-027
 Identities = 21/29 (72%), Positives = 25/29 (86%)
 Frame = +2 / +2

                                        
Query: 74  VYHTWQKLNENRLLWKLGTLPAGLVTFWN 160
           +YH WQ LNE+R LWKLGTLP GL+TF+N
Sbjct: 2   IYHYWQDLNEDRKLWKLGTLPPGLITFYN 88

 Score = 60.2 bits (125), Expect(3) = 5e-027
 Identities = 21/37 (56%), Positives = 29/37 (78%)
 Frame = +1 / +2

                                                
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
           T+PL+R+WH LGLGY+P V+  +I  A V+H+NGN K
Sbjct: 92  TYPLNRTWHVLGLGYDPAVDIAEIDNAAVVHYNGNYK 202

 Score = 38.6 bits (78), Expect(3) = 5e-027
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2 / +2

                                      
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQEC 361
           WL++ + KY+ YWS +V+ D   +Q C
Sbjct: 206 WLDLAISKYKTYWSKYVDVDNSHVQHC 286
>gb|CW285991.1|CW285991 104_763_11410641_116_35511_039 Sorghum methylation filtered library
           (LibID: 104) Sorghum bicolor genomic clone 11410641, DNA
           sequence
          Length = 612

 Score = 66.6 bits (139), Expect(3) = 1e-026
 Identities = 23/37 (62%), Positives = 28/37 (75%)
 Frame = +1 / +2

                                                
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
           T PLD+SWH LGLGYNP +   +I  A VIH+NGN+K
Sbjct: 128 THPLDKSWHVLGLGYNPTIERSEIDNAAVIHYNGNMK 238

 Score = 46.4 bits (95), Expect(3) = 1e-026
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +2 / +2

                               
Query: 98  NENRLLWKLGTLPAGLVTFW 157
           NENRLLWKLGTLP GL+TF+
Sbjct: 62  NENRLLWKLGTLPPGLLTFY 121

 Score = 46.0 bits (94), Expect(3) = 1e-026
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2 / +2

                                         
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNIN 370
           WLEI + KYR YW+ ++NY+  ++  C I+
Sbjct: 242 WLEIAMTKYRPYWTKYINYEHPYIHGCKIS 331
  Database: Sorghum_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:54 PM
  Number of letters in database: 491,359,669
  Number of sequences in database:  832,831
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 825,537,517
Number of Sequences: 832831
Number of extensions: 11402467
Number of successful extensions: 72163
Number of sequences better than 1.0e-020: 18
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 20792394350
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)