TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3023930.2.1
(544 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX622684.1|CX622684 GABR1_65_H12.b1_A002 GA- or brassino... 309 2e-083
gb|CW040084.1|CW040084 104_273_10505880_114_30266 Sorghum m... 130 1e-064
gb|CN133913.1|CN133913 OX1_19_D01.b1_A002 Oxidatively-stres... 214 1e-054
gb|CW275167.1|CW275167 104_748_11404818_148_35383_073 Sorgh... 111 2e-047
gb|CW499261.1|CW499261 fsbb001f293o20k0 Sorghum methylation... 109 6e-041
gb|CW392111.1|CW392111 fsbb001f078j07k0 Sorghum methylation... 111 1e-037
gb|BG487902.1|BG487902 RHIZ2_60_G05.g1_A003 Rhizome2 (RHIZ2... 108 3e-037
gb|CW499260.1|CW499260 fsbb001f293o20f0 Sorghum methylation... 130 1e-036
gb|BG558740.1|BG558740 RHIZ2_59_H07.g1_A003 Rhizome2 (RHIZ2... 108 2e-036
gb|CD424847.1|CD424847 SA1_9_H04.b1_A002 Salicylic acid-tre... 111 5e-036
gb|BE358411.1|BE358411 DG1_29_C02.g1_A002 Dark Grown 1 (DG1... 111 5e-036
gb|BG323188.1|BG323188 EM1_15_H09.g1_A002 Embryo 1 (EM1) So... 111 5e-036
gb|CD424232.1|CD424232 SA1_4_H05.b1_A002 Salicylic acid-tre... 111 5e-036
gb|BF656911.1|BF656911 OV2_22_E11.g1_A002 Ovary 2 (OV2) Sor... 111 5e-036
gb|BM327869.1|BM327869 PIC1_18_E04.g1_A002 Pathogen-infecte... 111 5e-036
gb|BG357415.1|BG357415 OV2_29_F03.g1_A002 Ovary 2 (OV2) Sor... 111 5e-036
gb|CF072326.1|CF072326 FE1_2_H07.b1_A002 Iron-deficient see... 111 3e-035
gb|CF072848.1|CF072848 FE1_26_E01.b1_A002 Iron-deficient se... 111 2e-033
gb|BM331190.1|BM331190 PIC1_70_G09.g1_A002 Pathogen-infecte... 111 2e-032
gb|BQ656040.1|BQ656040 pRC0338 Sorghum halepense rhizome cD... 107 6e-032
gb|BG556485.1|BG556485 EM1_37_G04.g1_A002 Embryo 1 (EM1) So... 91 2e-027
gb|CF072232.1|CF072232 FE1_6_H10.b1_A002 Iron-deficient see... 119 4e-026
gb|DN552508.1|DN552508 pSHR-RT-A-H1_H01_C100 pSHR Sorghum h... 111 3e-025
gb|BI098064.1|BI098064 IP1_31_E11.g1_A002 Immature pannicle... 108 3e-025
gb|AC169378.1| Sorghum bicolor clone SB_BBc0007L02, WORKING... 66 3e-024
gb|BF586222.1|BF586222 FM1_27_C04.b1_A003 Floral-Induced Me... 110 2e-023
gb|BG273345.1|BG273345 OV2_27_C04.g1_A002 Ovary 2 (OV2) Sor... 107 1e-022
gb|CF431297.1|CF431297 NIT1_5_G04.b1_A002 Nitrogen-deficien... 107 1e-022
gb|CW391258.1|CW391258 fsbb001f077f01f0 Sorghum methylation... 60 2e-021
gb|BI075496.1|BI075496 IP1_21_C05.g1_A002 Immature pannicle... 99 3e-021
gb|CW360333.1|CW360333 fsbb001f028g01k0 Sorghum methylation... 66 5e-021
>gb|CX622684.1|CX622684 GABR1_65_H12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_65_H12_A002 3', mRNA sequence
Length = 802
Score = 309 bits (670), Expect = 2e-083
Identities = 127/149 (85%), Positives = 136/149 (91%)
Frame = +1 / +3
Query: 1 YGCPNYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRIKVVNFGNQ 180
YGCPNYWMLHFFKESSGA LHPTAIQ+S+YDQL+ASAITWQNAKD+STYLR+KVVNFGNQ
Sbjct: 207 YGCPNYWMLHFFKESSGATLHPTAIQISNYDQLLASAITWQNAKDRSTYLRVKVVNFGNQ 386
Query: 181 AVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPVSSPMANAGQQMGASV 360
AVDLNIS+AEL TG+KKSGSKQ VLTSSSPLDENSFQQPEKV PV SPM N GQQMGASV
Sbjct: 387 AVDLNISIAELPTGIKKSGSKQMVLTSSSPLDENSFQQPEKVVPVLSPMVNVGQQMGASV 566
Query: 361 GPYSLTSFDLLLEPSKHDSV*NCQLKKHE 447
GPYSLTSFDLLLEPSKHDS+* + E
Sbjct: 567 GPYSLTSFDLLLEPSKHDSI*TVNSRAGE 653
Score = 281 bits (607), Expect = 8e-075
Identities = 120/138 (86%), Positives = 125/138 (90%)
Frame = -3 / -1
Query: 416 LSCLLGSSSRSNEVREYGPTEAPICCPAFAIGLDTGATFSGCWKEFSSSGLLDVRTVCFD 237
LSCLLGSSSRSNEVRE GPT+APICCP F IGL+TG TFSGCWKEFSSSGLLDVRT+CFD
Sbjct: 622 LSCLLGSSSRSNEVRE*GPTDAPICCPTFTIGLNTGTTFSGCWKEFSSSGLLDVRTICFD 443
Query: 236 PDFLTPVASSATDMFRSTAWLPKFTTFILR*VLLSLAFCQVMADATS*S*LET*MAVGWR 57
PDFL PV SSA DM RSTAWLPK TTF LR*VLLSLAFCQVMADA+S*S*LE MAVG R
Sbjct: 442 PDFLMPVGSSAMDMLRSTAWLPKLTTFTLR*VLLSLAFCQVMADASS*S*LEIWMAVG*R 263
Query: 56 MAPLDSLKKCSIQ*LGHP 3
+APLDSLKKCSIQ*LGHP
Sbjct: 262 VAPLDSLKKCSIQ*LGHP 209
Score = 265 bits (574), Expect = 3e-070
Identities = 112/140 (80%), Positives = 120/140 (85%)
Frame = +3 / +2
Query: 3 WVSQLLDATLFQGI*RRHPPSYSHSGLQLRSAGCVCHHLAER*RQEHLPQDKGGEFRQPS 182
W+SQLLDATL QGI* RHP SYSH LQL SA CVCHHLAE * QEHLPQ KGG+F QPS
Sbjct: 209 WMSQLLDATLLQGI*WRHPSSYSHPDLQL*SAACVCHHLAEC*GQEHLPQGKGGQFWQPS 388
Query: 183 CGSEHIRCGTGHRRQEVWIEADGSDVQQSA*RELLPAAREGGASVEPNGERGAADGRFRG 362
CGS+HI CGT H QEVWIE DGS++QQ A*RELLPAAREGGASVEPNGERGAADGR RG
Sbjct: 389 CGSQHIHCGTAHWHQEVWIETDGSNIQQPA*RELLPAAREGGASVEPNGERGAADGRVRG 568
Query: 363 AVLPHLI*PAAGAEQA*QRV 422
A+LPHL+* AAGAEQA*Q +
Sbjct: 569 ALLPHLV*SAAGAEQA*QHL 628
Score = 229 bits (495), Expect = 2e-059
Identities = 101/141 (71%), Positives = 104/141 (73%)
Frame = -1 / -2
Query: 424 FTRCHACSAPAAGQMR*GXXXXXXXXXXXXXXPLGSTLAPPSLAAGRSSRQADCWTSEPS 245
F CHACSAPAA Q R*G PLGSTLAPPSLAAGRSSRQA CW EPS
Sbjct: 630 FKCCHACSAPAADQTR*GSRAPRTRPSAAPRSPLGSTLAPPSLAAGRSSRQAGCWMLEPS 451
Query: 244 ASIQTS*RRWPVPQRICSDPQLGCRNSPPLS*GKCSCL*RSAK*WQTQPADRSWRPEWL* 65
SIQTS* +W VPQ IC DPQLGC+N PPL *GKCSC * SAK*WQTQ AD SWR WL*
Sbjct: 450 VSIQTS*CQWAVPQWIC*DPQLGCQN*PPLP*GKCSCP*HSAK*WQTQAADHSWRSGWL* 271
Query: 64 DGGWRR*IP*KSVASNSWDTH 2
D GWR *IP*+SVASNSWD H
Sbjct: 270 DEGWRH*IP*RSVASNSWDIH 208
Score = 175 bits (376), Expect(2) = 3e-054
Identities = 75/96 (78%), Positives = 82/96 (85%)
Frame = -2 / -3
Query: 288 EGVLVKRTAGRQNRLLRSRLLDAGGQFRNGYVQIHSLVAEIHHLYPEVSALVFSVLPSDG 109
EGVLVKR AG N L RSRLLDA GQFRNGYV+IHSLVA+I HLYPEVSA V S+LPSDG
Sbjct: 494 EGVLVKRAAGC*NHLFRSRLLDASGQFRNGYVEIHSLVAKIDHLYPEVSAPVLSILPSDG 315
Query: 108 RRNQLIVAGDLNGCRMEDGAARFLEKV*HPIVGTPI 1
RR QLI+ GDL+GCRM+ GA RFLE+V*HPIVGT I
Sbjct: 314 RRKQLIIVGDLDGCRMKGGATRFLEEV*HPIVGTSI 207
Score = 138 bits (297), Expect(2) = 1e-045
Identities = 65/95 (68%), Positives = 66/95 (69%)
Frame = +2 / +1
Query: 2 MGVPTIGCYTFSRNLAAPSSILQPFRSPATISWLRLPSLGRTLKTRALTSG*RW*ISATK 181
M VPTIGCYT SRNL AP ILQP RSP IS LRLPSLGR L+T ALTSG*RW I ATK
Sbjct: 208 MDVPTIGCYTSSRNLVAPPFILQPSRSPTMISCLRLPSLGRMLRTGALTSG*RWSILATK 387
Query: 182 LWI*TYPLRNWPPAXXXXXXXXXXXXPAVRLTRTP 286
LWI TYPLRN P A PA RLTRTP
Sbjct: 388 LWISTYPLRNCPLASRSLDRNRWF*HPAARLTRTP 492
Score = 65.2 bits (136), Expect(2) = 1e-045
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = +2 / +1
Query: 338 GSRWALPWGRTPSPHLTCCWSRASMTA 418
GSRWA PWG TPSP L CCWSRASMTA
Sbjct: 544 GSRWARPWGPTPSPRLICCWSRASMTA 624
Score = 57.9 bits (120), Expect(2) = 3e-054
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = -2 / -3
Query: 420 HAVMLARLQQQVK*GEGVRPHGSAHLLPRV 331
+AVMLARLQQQ+K GEGV PHG AHLLP V
Sbjct: 626 NAVMLARLQQQIKRGEGVGPHGRAHLLPHV 537
>gb|CW040084.1|CW040084 104_273_10505880_114_30266 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10505880, DNA
sequence
Length = 647
Score = 130 bits (279), Expect(3) = 1e-064
Identities = 49/56 (87%), Positives = 55/56 (98%)
Frame = +1 / +1
Query: 1 YGCPNYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRIKVVN 168
YGCPNYWMLHFFKESSGA LHPTAIQ+S+YDQL+ASAITWQNAKD+STYLRIKV++
Sbjct: 34 YGCPNYWMLHFFKESSGATLHPTAIQISNYDQLLASAITWQNAKDRSTYLRIKVID 201
Score = 111 bits (237), Expect(3) = 3e-059
Identities = 43/49 (87%), Positives = 44/49 (89%)
Frame = -3 / -2
Query: 305 TFSGCWKEFSSSGLLDVRTVCFDPDFLTPVASSATDMFRSTAWLPKFTT 159
TFSGCWKEFSSSGLLDVRT+CFDPDFL PV SSA DM RSTAWLPK TT
Sbjct: 439 TFSGCWKEFSSSGLLDVRTICFDPDFLMPVGSSAMDMLRSTAWLPKLTT 293
Score = 109 bits (232), Expect(3) = 2e-053
Identities = 47/70 (67%), Positives = 59/70 (84%)
Frame = +1 / +3
Query: 148 LRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPVSSPM 327
+ ++VVNFGNQAVDLNIS+AEL TG+KKSGSKQ VLTSSSPLDENSFQQPEKV+ + +
Sbjct: 282 IHLQVVNFGNQAVDLNISIAELPTGIKKSGSKQMVLTSSSPLDENSFQQPEKVSARTESV 461
Query: 328 ANAGQQMGAS 357
++ ++ AS
Sbjct: 462 SD*KNKVTAS 491
Score = 106 bits (226), Expect(4) = 3e-050
Identities = 44/53 (83%), Positives = 45/53 (84%)
Frame = -1 / -2
Query: 160 PLS*GKCSCL*RSAK*WQTQPADRSWRPEWL*DGGWRR*IP*KSVASNSWDTH 2
PLS*GKCSC * SAK*WQTQ AD SWR WL*D GWR *IP*+SVASNSWDTH
Sbjct: 193 PLS*GKCSCP*HSAK*WQTQAADHSWRSGWL*DEGWRH*IP*RSVASNSWDTH 35
Score = 106 bits (226), Expect(3) = 3e-059
Identities = 42/57 (73%), Positives = 51/57 (89%)
Frame = -2 / -3
Query: 171 EIHHLYPEVSALVFSVLPSDGRRNQLIVAGDLNGCRMEDGAARFLEKV*HPIVGTPI 1
++++LYPEVSA V S+LPSDGRR QLI+ GDL+GCRM+ GA RFLE+V*HPIVGTPI
Sbjct: 204 KVNYLYPEVSAPVLSILPSDGRRKQLIIVGDLDGCRMKGGATRFLEEV*HPIVGTPI 34
Score = 103 bits (219), Expect(3) = 2e-053
Identities = 44/53 (83%), Positives = 44/53 (83%)
Frame = +3 / +3
Query: 3 WVSQLLDATLFQGI*RRHPPSYSHSGLQLRSAGCVCHHLAER*RQEHLPQDKG 161
WVSQLLDATL QGI* RHP SYSH LQL SA CVCHHLAE * QEHLPQDKG
Sbjct: 36 WVSQLLDATLLQGI*WRHPSSYSHPDLQL*SAACVCHHLAEC*GQEHLPQDKG 194
Score = 101 bits (215), Expect(2) = 6e-039
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = -3 / -1
Query: 161 TFILR*VLLSLAFCQVMADATS*S*LET*MAVGWRMAPLDSLKKCSIQ*LGHP 3
TFILR*VLLSLAFCQVMADA+S*S*LE MAVG R+APLDSLKKCSIQ*LGHP
Sbjct: 194 TFILR*VLLSLAFCQVMADASS*S*LEIWMAVG*RVAPLDSLKKCSIQ*LGHP 36
Score = 98.2 bits (208), Expect(3) = 1e-064
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = +3 / +2
Query: 159 GGEFRQPSCGSEHIRCGTGHRRQEVWIEADGSDVQQSA*RELLPAAREG 305
GG+F QPSCGS+HI CGT H QEVWIE DGS++QQ A*RELLPAAREG
Sbjct: 293 GGQFWQPSCGSQHIHCGTAHWHQEVWIETDGSNIQQPA*RELLPAAREG 439
Score = 93.6 bits (198), Expect(3) = 2e-038
Identities = 42/53 (79%), Positives = 43/53 (81%)
Frame = +2 / +2
Query: 2 MGVPTIGCYTFSRNLAAPSSILQPFRSPATISWLRLPSLGRTLKTRALTSG*R 160
MGVPTIGCYT SRNL AP ILQP RSP IS LRLPSLGR L+T ALTSG*R
Sbjct: 35 MGVPTIGCYTSSRNLVAPPFILQPSRSPTMISCLRLPSLGRMLRTGALTSG*R 193
Score = 92.3 bits (195), Expect(4) = 3e-050
Identities = 38/49 (77%), Positives = 40/49 (81%)
Frame = -1 / -3
Query: 304 PSLAAGRSSRQADCWTSEPSASIQTS*RRWPVPQRICSDPQLGCRNSPP 158
PSLAAGRSSRQA CW EPS SIQTS* +W VPQ IC DPQLGC+N PP
Sbjct: 438 PSLAAGRSSRQAGCWMLEPSVSIQTS*CQWAVPQWIC*DPQLGCQN*PP 292
Score = 80.3 bits (169), Expect(2) = 6e-039
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = -2 / -1
Query: 288 EGVLVKRTAGRQNRLLRSRLLDAGGQFRNGYVQIHSLVAEIHHL 157
EGVLVKR AG N L RSRLLDA GQFRNGYV+IHSLVA+I HL
Sbjct: 422 EGVLVKRAAGC*NHLFRSRLLDASGQFRNGYVEIHSLVAKIDHL 291
Score = 59.3 bits (123), Expect(3) = 1e-064
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / +1
Query: 303 GGASVEPNGERGAADGRFRGAVLPH 377
GGASVEPNGERGAADGR RGA+LPH
Sbjct: 571 GGASVEPNGERGAADGRVRGALLPH 645
Score = 53.8 bits (111), Expect(3) = 2e-038
Identities = 25/43 (58%), Positives = 25/43 (58%)
Frame = +2 / +1
Query: 158 RW*ISATKLWI*TYPLRNWPPAXXXXXXXXXXXXPAVRLTRTP 286
RW I ATKLWI TYPLRN P A PA RLTRTP
Sbjct: 292 RWSILATKLWISTYPLRNCPLASRSLDRNRWF*HPAARLTRTP 420
Score = 52.4 bits (108), Expect(3) = 2e-038
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +1 / +2
Query: 301 KVAPVSSPMANAGQQMGASVGPYSLT 378
+V PV SPM N GQQMGASVGPYSLT
Sbjct: 569 QVVPVLSPMVNVGQQMGASVGPYSLT 646
Score = 51.9 bits (107), Expect(3) = 3e-059
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = -3 / -3
Query: 377 VREYGPTEAPICCPAFAIGLDTGAT 303
VRE GPT+APICCP F IGL+TG T
Sbjct: 645 VRE*GPTDAPICCPTFTIGLNTGTT 571
Score = 36.3 bits (73), Expect(3) = 2e-053
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 338 GSRWALPWGRTPSP 379
GSRWA PWG TPSP
Sbjct: 606 GSRWARPWGPTPSP 647
Score = 35.0 bits (70), Expect(4) = 3e-050
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2 / -2
Query: 378 GEGVRPHGSAHLLPRV 331
GEGV PHG AHLLP V
Sbjct: 646 GEGVGPHGRAHLLPHV 599
Score = 22.1 bits (42), Expect(4) = 3e-050
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 325 LGSTLAPPS 299
LGSTLAPP+
Sbjct: 593 LGSTLAPPA 567
>gb|CN133913.1|CN133913 OX1_19_D01.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_19_D01_A002 3', mRNA sequence
Length = 715
Score = 214 bits (461), Expect = 1e-054
Identities = 87/133 (65%), Positives = 106/133 (79%)
Frame = +1 / +1
Query: 1 YGCPNYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRIKVVNFGNQ 180
YGCPNYW+LHFFK+SSGA LHP+ IQ+ +YDQLV SAITW N D +TYL+IKVVNFG++
Sbjct: 109 YGCPNYWILHFFKDSSGAALHPSTIQLPNYDQLVTSAITWNNPHDGNTYLKIKVVNFGSK 288
Query: 181 AVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPVSSPMANAGQQMGASV 360
AV+LNISV L ++ GS +TVLTS DENSFQQP+KV P +SP+ NAG+QMG +
Sbjct: 289 AVNLNISVTGLEADIQTFGSLKTVLTSGWLRDENSFQQPDKVVPAASPITNAGKQMGVVL 468
Query: 361 GPYSLTSFDLLLE 399
YSLTSFDLLL+
Sbjct: 469 NSYSLTSFDLLLD 507
Score = 159 bits (341), Expect = 4e-038
Identities = 76/132 (57%), Positives = 85/132 (64%)
Frame = -3 / -3
Query: 398 SSSRSNEVREYGPTEAPICCPAFAIGLDTGATFSGCWKEFSSSGLLDVRTVCFDPDFLTP 219
S RSNEVREY PIC PA IGL G T SGCWKEFSS DVRTV DP+
Sbjct: 506 SKRRSNEVREYEFRTTPICLPALVIGLAAGTTLSGCWKEFSSRSQPDVRTVFKDPNV*IS 327
Query: 218 VASSATDMFRSTAWLPKFTTFILR*VLLSLAFCQVMADATS*S*LET*MAVGWRMAPLDS 39
++ TD+FR TA LPKFTTFI R*V S V+AD T+*S* +*+ G APL+S
Sbjct: 326 ASNPVTDIFRLTALLPKFTTFIFR*VFPSCGLFHVIADVTN*S*FGS*IVDG*SAAPLES 147
Query: 38 LKKCSIQ*LGHP 3
LKKC IQ* GHP
Sbjct: 146 LKKCRIQ*FGHP 111
>gb|CW275167.1|CW275167 104_748_11404818_148_35383_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404818, DNA
sequence
Length = 650
Score = 111 bits (236), Expect(3) = 2e-047
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = +1 / +2
Query: 1 YGCPNYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRIKVVNF 171
YGCPNYW+LHFFK+SSGA LHP+ IQ+ +YDQLV SAITW N D +TYL+IKV++F
Sbjct: 26 YGCPNYWILHFFKDSSGAALHPSTIQLPNYDQLVTSAITWNNPHDGNTYLKIKVISF 196
Score = 67.0 bits (140), Expect(3) = 5e-031
Identities = 29/49 (59%), Positives = 33/49 (67%)
Frame = -3 / -1
Query: 305 TFSGCWKEFSSSGLLDVRTVCFDPDFLTPVASSATDMFRSTAWLPKFTT 159
T SGCWKEFSS DVRTV DP+ ++ TD+FR TA LPKFTT
Sbjct: 413 TLSGCWKEFSSRSQPDVRTVFKDPNV*ISASNPVTDIFRLTALLPKFTT 267
Score = 66.6 bits (139), Expect(3) = 2e-047
Identities = 30/50 (60%), Positives = 38/50 (76%)
Frame = +1 / +1
Query: 157 KVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKV 306
+VVNFG++AV+LNISV L ++ GS +TVLTS DENSFQQP+KV
Sbjct: 265 QVVNFGSKAVNLNISVTGLEADIQTFGSLKTVLTSGWLRDENSFQQPDKV 414
Score = 59.3 bits (123), Expect(3) = 5e-031
Identities = 31/56 (55%), Positives = 36/56 (64%)
Frame = -3 / -3
Query: 170 KFTTFILR*VLLSLAFCQVMADATS*S*LET*MAVGWRMAPLDSLKKCSIQ*LGHP 3
K TFI R*V S V+AD T+*S* +*+ G APL+SLKKC IQ* GHP
Sbjct: 195 KEITFIFR*VFPSCGLFHVIADVTN*S*FGS*IVDG*SAAPLESLKKCRIQ*FGHP 28
Score = 51.0 bits (105), Expect(3) = 2e-047
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = +1 / +1
Query: 304 VAPVSSPMANAGQQMGASVGPYSLTSFDLLLE 399
V P +SP+ NAG+QMG + YSLTSFDLLL+
Sbjct: 529 VVPAASPITNAGKQMGVVLNSYSLTSFDLLLD 624
Score = 46.9 bits (96), Expect(3) = 5e-031
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = -3 / -1
Query: 398 SSSRSNEVREYGPTEAPICCPAFAIGLDTGATFS 297
S RSNEVREY PIC PA IGL G T+S
Sbjct: 623 SKRRSNEVREYEFRTTPICLPALVIGLAAGTTYS 522
>gb|CW499261.1|CW499261 fsbb001f293o20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f293o20, DNA
sequence
Length = 713
Score = 109 bits (232), Expect(2) = 6e-041
Identities = 42/49 (85%), Positives = 43/49 (87%)
Frame = -3 / +3
Query: 305 TFSGCWKEFSSSGLLDVRTVCFDPDFLTPVASSATDMFRSTAWLPKFTT 159
TFSGCWKEFSSSGLLDVR +CFDPDFL PV SSA DM RSTAWLPK TT
Sbjct: 531 TFSGCWKEFSSSGLLDVRNICFDPDFLMPVGSSAMDMLRSTAWLPKLTT 677
Score = 106 bits (227), Expect(2) = 5e-036
Identities = 46/70 (65%), Positives = 58/70 (82%)
Frame = +1 / -2
Query: 148 LRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPVSSPM 327
+ ++VVNFGNQAVDLNIS+AEL TG+KKSGSKQ LTSSSPLDENSFQQPEKV+ + +
Sbjct: 688 IHLQVVNFGNQAVDLNISIAELPTGIKKSGSKQMFLTSSSPLDENSFQQPEKVSARTESV 509
Query: 328 ANAGQQMGAS 357
++ ++ AS
Sbjct: 508 SD*KNKVTAS 479
Score = 94.1 bits (199), Expect(2) = 8e-038
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +3 / -1
Query: 159 GGEFRQPSCGSEHIRCGTGHRRQEVWIEADGSDVQQSA*RELLPAAREG 305
GG+F QPSCGS+HI CGT H QEVWIE D S++QQ A*RELLPAAREG
Sbjct: 677 GGQFWQPSCGSQHIHCGTAHWHQEVWIETDVSNIQQPA*RELLPAAREG 531
Score = 88.6 bits (187), Expect(2) = 6e-028
Identities = 37/49 (75%), Positives = 39/49 (79%)
Frame = -1 / +1
Query: 304 PSLAAGRSSRQADCWTSEPSASIQTS*RRWPVPQRICSDPQLGCRNSPP 158
PSLAAGRSSRQA CW E S SIQTS* +W VPQ IC DPQLGC+N PP
Sbjct: 532 PSLAAGRSSRQAGCWMLETSVSIQTS*CQWAVPQWIC*DPQLGCQN*PP 678
Score = 85.4 bits (180), Expect(2) = 8e-038
Identities = 36/49 (73%), Positives = 39/49 (79%)
Frame = +1 / -1
Query: 301 KVAPVSSPMANAGQQMGASVGPYSLTSFDLLLEPSKHDSV*NCQLKKHE 447
+V PV SPM N GQQMGASVGPYSLTSFDLLLEPSKHDS+* + E
Sbjct: 401 QVVPVLSPMVNVGQQMGASVGPYSLTSFDLLLEPSKHDSI*TVNSRAGE 255
Score = 80.8 bits (170), Expect(2) = 6e-041
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = -3 / +1
Query: 416 LSCLLGSSSRSNEVREYGPTEAPICCPAFAIGLDTGAT 303
LSCLLGSSSRSNEVRE GPT+APICCP F IGL+TG T
Sbjct: 286 LSCLLGSSSRSNEVRE*GPTDAPICCPTFTIGLNTGTT 399
Score = 80.3 bits (169), Expect(2) = 3e-024
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = +3 / -3
Query: 303 GGASVEPNGERGAADGRFRGAVLPHLI*PAAGAEQA*QRV 422
GGASVEPNGERGAADGR RGA+LPHL+* AAGAEQA*Q +
Sbjct: 399 GGASVEPNGERGAADGRVRGALLPHLV*SAAGAEQA*QHL 280
Score = 77.6 bits (163), Expect(2) = 5e-022
Identities = 34/44 (77%), Positives = 36/44 (81%)
Frame = -2 / +2
Query: 288 EGVLVKRTAGRQNRLLRSRLLDAGGQFRNGYVQIHSLVAEIHHL 157
EGVLVKR AG L RSRLLDA GQFRNGYV+IHSLVA+I HL
Sbjct: 548 EGVLVKRAAGC*KHLFRSRLLDASGQFRNGYVEIHSLVAKIDHL 679
Score = 65.2 bits (136), Expect(2) = 5e-036
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = +2 / -2
Query: 338 GSRWALPWGRTPSPHLTCCWSRASMTA 418
GSRWA PWG TPSP L CCWSRASMTA
Sbjct: 364 GSRWARPWGPTPSPRLICCWSRASMTA 284
Score = 57.9 bits (120), Expect(2) = 6e-028
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = -2 / +3
Query: 420 HAVMLARLQQQVK*GEGVRPHGSAHLLPRV 331
+AVMLARLQQQ+K GEGV PHG AHLLP V
Sbjct: 282 NAVMLARLQQQIKRGEGVGPHGRAHLLPHV 371
Score = 53.8 bits (111), Expect(2) = 3e-024
Identities = 25/43 (58%), Positives = 25/43 (58%)
Frame = +2 / -3
Query: 158 RW*ISATKLWI*TYPLRNWPPAXXXXXXXXXXXXPAVRLTRTP 286
RW I ATKLWI TYPLRN P A PA RLTRTP
Sbjct: 678 RWSILATKLWISTYPLRNCPLASRSLDRNRCF*HPAARLTRTP 550
Score = 48.7 bits (100), Expect(2) = 5e-022
Identities = 23/42 (54%), Positives = 24/42 (57%)
Frame = -1 / +2
Query: 424 FTRCHACSAPAAGQMR*GXXXXXXXXXXXXXXPLGSTLAPPS 299
F CHACSAPAA Q R*G PLGSTLAPP+
Sbjct: 278 FKCCHACSAPAADQTR*GSRAPRTRPSAAPRSPLGSTLAPPA 403
>gb|CW392111.1|CW392111 fsbb001f078j07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f078j07, DNA
sequence
Length = 802
Score = 111 bits (236), Expect(2) = 1e-037
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = +1 / -1
Query: 1 YGCPNYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRIKVVNF 171
YGCPNYW+LHFFK+SSGA LHP+ IQ+ +YDQLV SAITW N D +TYL+IKV++F
Sbjct: 469 YGCPNYWILHFFKDSSGAALHPSTIQLPNYDQLVTSAITWNNPHDGNTYLKIKVISF 299
Score = 67.0 bits (140), Expect(2) = 2e-022
Identities = 29/49 (59%), Positives = 33/49 (67%)
Frame = -3 / +1
Query: 305 TFSGCWKEFSSSGLLDVRTVCFDPDFLTPVASSATDMFRSTAWLPKFTT 159
T SGCWKEFSS DVRTV DP+ ++ TD+FR TA LPKFTT
Sbjct: 82 TLSGCWKEFSSRSQPDVRTVFKDPNV*ISASNPVTDIFRLTALLPKFTT 228
Score = 66.6 bits (139), Expect(2) = 1e-037
Identities = 30/50 (60%), Positives = 38/50 (76%)
Frame = +1 / -3
Query: 157 KVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKV 306
+VVNFG++AV+LNISV L ++ GS +TVLTS DENSFQQP+KV
Sbjct: 230 QVVNFGSKAVNLNISVTGLEADIQTFGSLKTVLTSGWLRDENSFQQPDKV 81
Score = 59.3 bits (123), Expect(2) = 2e-022
Identities = 31/56 (55%), Positives = 36/56 (64%)
Frame = -3 / +3
Query: 170 KFTTFILR*VLLSLAFCQVMADATS*S*LET*MAVGWRMAPLDSLKKCSIQ*LGHP 3
K TFI R*V S V+AD T+*S* +*+ G APL+SLKKC IQ* GHP
Sbjct: 300 KEITFIFR*VFPSCGLFHVIADVTN*S*FGS*IVDG*SAAPLESLKKCRIQ*FGHP 467
>gb|BG487902.1|BG487902 RHIZ2_60_G05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 562
Score = 108 bits (230), Expect(2) = 3e-037
Identities = 45/91 (49%), Positives = 63/91 (69%)
Frame = +1 / +2
Query: 136 KSTYLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPV 315
++++LR+KV+NFG+ AV L IS + L + GS TVLTS++ +DENSF P KV PV
Sbjct: 188 ENSFLRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSANVMDENSFSNPTKVVPV 367
Query: 316 SSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
S M+NA +QM ++ P+S +SFDL L SK
Sbjct: 368 KSDMSNAAEQMQVTLAPHSFSSFDLALAQSK 460
Score = 68.0 bits (142), Expect(2) = 3e-037
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +1 / +2
Query: 1 YGCPNYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRI 156
YG P+YWM F+ESSGA+LHPT I S L ASAITWQ++++ +++
Sbjct: 59 YGTPSYWMQTLFRESSGAMLHPTTISSSYSGSLAASAITWQDSENSFLRVKV 214
>gb|CW499260.1|CW499260 fsbb001f293o20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f293o20, DNA
sequence
Length = 731
Score = 130 bits (279), Expect(2) = 1e-036
Identities = 49/56 (87%), Positives = 55/56 (98%)
Frame = +1 / +3
Query: 1 YGCPNYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRIKVVN 168
YGCPNYWMLHFFKESSGA LHPTAIQ+S+YDQL+ASAITWQNAKD+STYLRIKV++
Sbjct: 411 YGCPNYWMLHFFKESSGATLHPTAIQISNYDQLLASAITWQNAKDRSTYLRIKVID 578
Score = 106 bits (226), Expect(2) = 4e-028
Identities = 44/53 (83%), Positives = 45/53 (84%)
Frame = -1 / -3
Query: 160 PLS*GKCSCL*RSAK*WQTQPADRSWRPEWL*DGGWRR*IP*KSVASNSWDTH 2
PLS*GKCSC * SAK*WQTQ AD SWR WL*D GWR *IP*+SVASNSWDTH
Sbjct: 570 PLS*GKCSCP*HSAK*WQTQAADHSWRSGWL*DEGWRH*IP*RSVASNSWDTH 412
Score = 106 bits (226), Expect(2) = 3e-028
Identities = 42/57 (73%), Positives = 51/57 (89%)
Frame = -2 / -1
Query: 171 EIHHLYPEVSALVFSVLPSDGRRNQLIVAGDLNGCRMEDGAARFLEKV*HPIVGTPI 1
++++LYPEVSA V S+LPSDGRR QLI+ GDL+GCRM+ GA RFLE+V*HPIVGTPI
Sbjct: 581 KVNYLYPEVSAPVLSILPSDGRRKQLIIVGDLDGCRMKGGATRFLEEV*HPIVGTPI 411
Score = 103 bits (219), Expect(2) = 5e-028
Identities = 44/53 (83%), Positives = 44/53 (83%)
Frame = +3 / +2
Query: 3 WVSQLLDATLFQGI*RRHPPSYSHSGLQLRSAGCVCHHLAER*RQEHLPQDKG 161
WVSQLLDATL QGI* RHP SYSH LQL SA CVCHHLAE * QEHLPQDKG
Sbjct: 413 WVSQLLDATLLQGI*WRHPSSYSHPDLQL*SAACVCHHLAEC*GQEHLPQDKG 571
Score = 101 bits (215), Expect(2) = 3e-026
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = -3 / -2
Query: 161 TFILR*VLLSLAFCQVMADATS*S*LET*MAVGWRMAPLDSLKKCSIQ*LGHP 3
TFILR*VLLSLAFCQVMADA+S*S*LE MAVG R+APLDSLKKCSIQ*LGHP
Sbjct: 571 TFILR*VLLSLAFCQVMADASS*S*LEIWMAVG*RVAPLDSLKKCSIQ*LGHP 413
Score = 93.6 bits (198), Expect(2) = 4e-023
Identities = 42/53 (79%), Positives = 43/53 (81%)
Frame = +2 / +1
Query: 2 MGVPTIGCYTFSRNLAAPSSILQPFRSPATISWLRLPSLGRTLKTRALTSG*R 160
MGVPTIGCYT SRNL AP ILQP RSP IS LRLPSLGR L+T ALTSG*R
Sbjct: 412 MGVPTIGCYTSSRNLVAPPFILQPSRSPTMISCLRLPSLGRMLRTGALTSG*R 570
Score = 43.2 bits (88), Expect(2) = 1e-036
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3 / +2
Query: 162 GEFRQPSCGSEHIRCGTGH 218
G+F QPSCGS+HI CGT H
Sbjct: 674 GQFWQPSCGSQHIHCGTAH 730
Score = 41.8 bits (85), Expect(2) = 5e-028
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +1 / +3
Query: 163 VNFGNQAVDLNISVAELAT 219
VNFGNQAVDLNIS+AEL T
Sbjct: 675 VNFGNQAVDLNISIAELPT 731
Score = 39.6 bits (80), Expect(2) = 3e-028
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = -2 / -1
Query: 216 GQFRNGYVQIHSLVAEI 166
GQFRNGYV+IHSLVA+I
Sbjct: 728 GQFRNGYVEIHSLVAKI 678
Score = 39.1 bits (79), Expect(2) = 4e-028
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / -3
Query: 217 WPVPQRICSDPQLGCRNSP 161
W VPQ IC DPQLGC+N P
Sbjct: 729 WAVPQWIC*DPQLGCQN*P 673
Score = 37.7 bits (76), Expect(2) = 3e-026
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -3 / -2
Query: 218 VASSATDMFRSTAWLPKFT 162
V SSA DM RSTAWLPK T
Sbjct: 730 VGSSAMDMLRSTAWLPKLT 674
Score = 35.0 bits (70), Expect(2) = 4e-023
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2 / +1
Query: 167 ISATKLWI*TYPLRNWP 217
I ATKLWI TYPLRN P
Sbjct: 679 ILATKLWISTYPLRNCP 729
>gb|BG558740.1|BG558740 RHIZ2_59_H07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 501
Score = 108 bits (230), Expect(2) = 2e-036
Identities = 45/91 (49%), Positives = 63/91 (69%)
Frame = +1 / +2
Query: 136 KSTYLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPV 315
++++LR+KV+NFG+ AV L IS + L + GS TVLTS++ +DENSF P KV PV
Sbjct: 128 ENSFLRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSANVMDENSFSNPTKVVPV 307
Query: 316 SSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
S M+NA +QM ++ P+S +SFDL L SK
Sbjct: 308 KSDMSNAAEQMQVTLAPHSFSSFDLALAQSK 400
Score = 64.8 bits (135), Expect(2) = 2e-036
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +1 / +2
Query: 4 GCPNYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRI 156
G P+YWM F+ESSGA+LHPT I S L ASAITWQ++++ +++
Sbjct: 2 GTPSYWMQTLFRESSGAMLHPTTISSSYSGSLAASAITWQDSENSFLRVKV 154
>gb|CD424847.1|CD424847 SA1_9_H04.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_9_H04_A002 3', mRNA sequence
Length = 664
Score = 111 bits (238), Expect(2) = 5e-036
Identities = 47/91 (51%), Positives = 63/91 (69%)
Frame = +1 / +3
Query: 136 KSTYLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPV 315
++++LR+KVVNFG+ V L IS + L V GS TVLTS + +DENSF P KVAPV
Sbjct: 276 ENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPV 455
Query: 316 SSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
S ++NAG+QM ++ P+S T+FDL L SK
Sbjct: 456 KSQLSNAGEQMQVTLAPHSFTTFDLALAQSK 548
Score = 60.2 bits (125), Expect(2) = 5e-036
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1 / +3
Query: 1 YGCPNYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRI 156
YG P+YWM F+ESSGA++HP + L ASAITWQ++++ +++
Sbjct: 147 YGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKV 302
>gb|BE358411.1|BE358411 DG1_29_C02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 646
Score = 111 bits (238), Expect(2) = 5e-036
Identities = 47/91 (51%), Positives = 63/91 (69%)
Frame = +1 / +1
Query: 136 KSTYLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPV 315
++++LR+KVVNFG+ V L IS + L V GS TVLTS + +DENSF P KVAPV
Sbjct: 274 ENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPV 453
Query: 316 SSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
S ++NAG+QM ++ P+S T+FDL L SK
Sbjct: 454 KSQLSNAGEQMQVTLAPHSFTTFDLALAQSK 546
Score = 60.2 bits (125), Expect(2) = 5e-036
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1 / +1
Query: 1 YGCPNYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRI 156
YG P+YWM F+ESSGA++HP + L ASAITWQ++++ +++
Sbjct: 145 YGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKV 300
>gb|BG323188.1|BG323188 EM1_15_H09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 646
Score = 111 bits (238), Expect(2) = 5e-036
Identities = 47/91 (51%), Positives = 63/91 (69%)
Frame = +1 / +3
Query: 136 KSTYLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPV 315
++++LR+KVVNFG+ V L IS + L V GS TVLTS + +DENSF P KVAPV
Sbjct: 273 ENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPV 452
Query: 316 SSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
S ++NAG+QM ++ P+S T+FDL L SK
Sbjct: 453 KSQLSNAGEQMQVTLAPHSFTTFDLALAQSK 545
Score = 60.2 bits (125), Expect(2) = 5e-036
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1 / +3
Query: 1 YGCPNYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRI 156
YG P+YWM F+ESSGA++HP + L ASAITWQ++++ +++
Sbjct: 144 YGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKV 299
>gb|CD424232.1|CD424232 SA1_4_H05.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_4_H05_A002 3', mRNA sequence
Length = 632
Score = 111 bits (238), Expect(2) = 5e-036
Identities = 47/91 (51%), Positives = 63/91 (69%)
Frame = +1 / +3
Query: 136 KSTYLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPV 315
++++LR+KVVNFG+ V L IS + L V GS TVLTS + +DENSF P KVAPV
Sbjct: 237 ENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPV 416
Query: 316 SSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
S ++NAG+QM ++ P+S T+FDL L SK
Sbjct: 417 KSQLSNAGEQMQVTLAPHSFTTFDLALAQSK 509
Score = 60.2 bits (125), Expect(2) = 5e-036
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1 / +3
Query: 1 YGCPNYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRI 156
YG P+YWM F+ESSGA++HP + L ASAITWQ++++ +++
Sbjct: 108 YGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKV 263
>gb|BF656911.1|BF656911 OV2_22_E11.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 619
Score = 111 bits (238), Expect(2) = 5e-036
Identities = 47/91 (51%), Positives = 63/91 (69%)
Frame = +1 / +2
Query: 136 KSTYLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPV 315
++++LR+KVVNFG+ V L IS + L V GS TVLTS + +DENSF P KVAPV
Sbjct: 272 ENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPV 451
Query: 316 SSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
S ++NAG+QM ++ P+S T+FDL L SK
Sbjct: 452 KSQLSNAGEQMQVTLAPHSFTTFDLALAQSK 544
Score = 60.2 bits (125), Expect(2) = 5e-036
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1 / +2
Query: 1 YGCPNYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRI 156
YG P+YWM F+ESSGA++HP + L ASAITWQ++++ +++
Sbjct: 143 YGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKV 298
>gb|BM327869.1|BM327869 PIC1_18_E04.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 551
Score = 111 bits (238), Expect(2) = 5e-036
Identities = 47/91 (51%), Positives = 63/91 (69%)
Frame = +1 / +3
Query: 136 KSTYLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPV 315
++++LR+KVVNFG+ V L IS + L V GS TVLTS + +DENSF P KVAPV
Sbjct: 138 ENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPV 317
Query: 316 SSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
S ++NAG+QM ++ P+S T+FDL L SK
Sbjct: 318 KSQLSNAGEQMQVTLAPHSFTTFDLALAQSK 410
Score = 60.2 bits (125), Expect(2) = 5e-036
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1 / +3
Query: 1 YGCPNYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRI 156
YG P+YWM F+ESSGA++HP + L ASAITWQ++++ +++
Sbjct: 9 YGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKV 164
>gb|BG357415.1|BG357415 OV2_29_F03.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 529
Score = 111 bits (238), Expect(2) = 5e-036
Identities = 47/91 (51%), Positives = 63/91 (69%)
Frame = +1 / +1
Query: 136 KSTYLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPV 315
++++LR+KVVNFG+ V L IS + L V GS TVLTS + +DENSF P KVAPV
Sbjct: 136 ENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPV 315
Query: 316 SSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
S ++NAG+QM ++ P+S T+FDL L SK
Sbjct: 316 KSQLSNAGEQMQVTLAPHSFTTFDLALAQSK 408
Score = 60.2 bits (125), Expect(2) = 5e-036
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1 / +1
Query: 1 YGCPNYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRI 156
YG P+YWM F+ESSGA++HP + L ASAITWQ++++ +++
Sbjct: 7 YGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKV 162
>gb|CF072326.1|CF072326 FE1_2_H07.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_2_H07_A002 3', mRNA sequence
Length = 544
Score = 111 bits (238), Expect(2) = 3e-035
Identities = 47/91 (51%), Positives = 63/91 (69%)
Frame = +1 / +3
Query: 136 KSTYLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPV 315
++++LR+KVVNFG+ V L IS + L V GS TVLTS + +DENSF P KVAPV
Sbjct: 147 ENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPV 326
Query: 316 SSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
S ++NAG+QM ++ P+S T+FDL L SK
Sbjct: 327 KSQLSNAGEQMQVTLAPHSFTTFDLALAQSK 419
Score = 57.4 bits (119), Expect(2) = 3e-035
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = +1 / +3
Query: 1 YGCPNYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRI 156
YG P+YWM F+ESSGA++HP + L A AITWQ++++ +++
Sbjct: 18 YGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAAFAITWQDSENSFLRVKV 173
>gb|CF072848.1|CF072848 FE1_26_E01.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_26_E01_A002 3', mRNA sequence
Length = 514
Score = 111 bits (238), Expect(2) = 2e-033
Identities = 47/91 (51%), Positives = 63/91 (69%)
Frame = +1 / +1
Query: 136 KSTYLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPV 315
++++LR+KVVNFG+ V L IS + L V GS TVLTS + +DENSF P KVAPV
Sbjct: 118 ENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPV 297
Query: 316 SSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
S ++NAG+QM ++ P+S T+FDL L SK
Sbjct: 298 KSQLSNAGEQMQVTLAPHSFTTFDLALAQSK 390
Score = 51.5 bits (106), Expect(2) = 2e-033
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +1 / +1
Query: 13 NYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRI 156
+YWM F+ESSGA++HP + L ASAITWQ++++ +++
Sbjct: 1 SYWMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKV 144
>gb|BM331190.1|BM331190 PIC1_70_G09.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 627
Score = 111 bits (238), Expect(2) = 2e-032
Identities = 47/91 (51%), Positives = 63/91 (69%)
Frame = +1 / +2
Query: 136 KSTYLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPV 315
++++LR+KVVNFG+ V L IS + L V GS TVLTS + +DENSF P KVAPV
Sbjct: 113 ENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPV 292
Query: 316 SSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
S ++NAG+QM ++ P+S T+FDL L SK
Sbjct: 293 KSQLSNAGEQMQVTLAPHSFTTFDLALAQSK 385
Score = 47.8 bits (98), Expect(2) = 2e-032
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +1 / +2
Query: 19 WMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRI 156
WM F+ESSGA++HP + L ASAITWQ++++ +++
Sbjct: 2 WMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKV 139
>gb|BQ656040.1|BQ656040 pRC0338 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC0338, mRNA sequence
Length = 487
Score = 107 bits (229), Expect(2) = 6e-032
Identities = 45/91 (49%), Positives = 62/91 (68%)
Frame = +1 / +2
Query: 136 KSTYLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPV 315
++++LR+KV+NFG+ AV L IS L + GS TVLTS++ +DENSF P KV PV
Sbjct: 110 ENSFLRVKVINFGSDAVTLTISTTGLQASINALGSTATVLTSANVMDENSFSNPTKVVPV 289
Query: 316 SSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
S M+NA +QM ++ P+S +SFDL L SK
Sbjct: 290 KSDMSNAAEQMQVTLAPHSFSSFDLALAQSK 382
Score = 50.6 bits (104), Expect(2) = 6e-032
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +1 / +2
Query: 22 MLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRI 156
M F+ESSGA+LHPT I S L ASAITWQ++++ +++
Sbjct: 2 MQTLFRESSGAMLHPTTISSSYSGSLAASAITWQDSENSFLRVKV 136
>gb|BG556485.1|BG556485 EM1_37_G04.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 337
Score = 91.3 bits (193), Expect(2) = 2e-027
Identities = 38/71 (53%), Positives = 50/71 (70%)
Frame = +1 / +2
Query: 136 KSTYLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPV 315
++++LR+KVVNFG+ V L IS + L V GS TVLTS + +DENSF P KVAPV
Sbjct: 119 ENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPV 298
Query: 316 SSPMANAGQQM 348
S ++NAG+QM
Sbjct: 299 KSQLSNAGEQM 331
Score = 51.5 bits (106), Expect(2) = 2e-027
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +1 / +2
Query: 13 NYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRI 156
+YWM F+ESSGA++HP + L ASAITWQ++++ +++
Sbjct: 2 SYWMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKV 145
>gb|CF072232.1|CF072232 FE1_6_H10.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_6_H10_A002 3', mRNA sequence
Length = 427
Score = 119 bits (254), Expect = 4e-026
Identities = 52/84 (61%), Positives = 65/84 (77%)
Frame = +1 / +3
Query: 148 LRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPVSSPM 327
L+IKVVNFG++AV+LNISV L ++ GS +TVLTS DENSFQQP+KV P +SP+
Sbjct: 3 LKIKVVNFGSKAVNLNISVTGLEADIQTFGSLKTVLTSGWLRDENSFQQPDKVVPAASPI 182
Query: 328 ANAGQQMGASVGPYSLTSFDLLLE 399
NAG+QMG + YSLTSFDLLL+
Sbjct: 183 TNAGKQMGVVLNSYSLTSFDLLLD 254
Score = 112 bits (239), Expect = 4e-024
Identities = 50/84 (59%), Positives = 54/84 (64%)
Frame = -3 / -1
Query: 398 SSSRSNEVREYGPTEAPICCPAFAIGLDTGATFSGCWKEFSSSGLLDVRTVCFDPDFLTP 219
S RSNEVREY PIC PA IGL G T SGCWKEFSS DVRTV DP+
Sbjct: 253 SKRRSNEVREYEFRTTPICLPALVIGLAAGTTLSGCWKEFSSRSQPDVRTVFKDPNV*IS 74
Query: 218 VASSATDMFRSTAWLPKFTTFILR 147
++ TD+FR TA LPKFTTFI R
Sbjct: 73 ASNPVTDIFRLTALLPKFTTFIFR 2
>gb|DN552508.1|DN552508 pSHR-RT-A-H1_H01_C100 pSHR Sorghum halepense cDNA, mRNA sequence
Length = 484
Score = 111 bits (238), Expect(2) = 3e-025
Identities = 47/91 (51%), Positives = 63/91 (69%)
Frame = +1 / +1
Query: 136 KSTYLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPV 315
++++LR+KVVNFG+ V L IS + L V GS TVLTS + +DENSF P KVAPV
Sbjct: 55 ENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPV 234
Query: 316 SSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
S ++NAG+QM ++ P+S T+FDL L SK
Sbjct: 235 KSQLSNAGEQMQVTLAPHSFTTFDLALAQSK 327
Score = 24.0 bits (46), Expect(2) = 3e-025
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +1 / +1
Query: 97 LVASAITWQNAKDKSTYLRI 156
L ASAITWQ++++ +++
Sbjct: 22 LAASAITWQDSENSFLRVKV 81
>gb|BI098064.1|BI098064 IP1_31_E11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 478
Score = 108 bits (231), Expect(2) = 3e-025
Identities = 46/91 (50%), Positives = 61/91 (67%)
Frame = +1 / +3
Query: 136 KSTYLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPV 315
++++LR+KVVNFG+ V L IS + L V GS TV T + +DENSF P KVAPV
Sbjct: 81 ENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVFTFGNVMDENSFSNPNKVAPV 260
Query: 316 SSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
S ++NAG+QM +V P+S T+FDL L SK
Sbjct: 261 KSQLSNAGEQMQVTVAPHSFTTFDLALAQSK 353
Score = 27.2 bits (53), Expect(2) = 3e-025
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +1 / +3
Query: 52 AILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRI 156
A++HP + L A AITWQ++++ +++
Sbjct: 3 AMIHPINMSSRYSSSLAAFAITWQDSENSFLRVKV 107
>gb|AC169378.1| Sorghum bicolor clone SB_BBc0007L02, WORKING DRAFT SEQUENCE, 2
unordered pieces
Length = 138609
Score = 66.1 bits (138), Expect(3) = 3e-024
Identities = 26/56 (46%), Positives = 34/56 (60%)
Frame = +1 / -2
Query: 1 YGCPNYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRIKVVN 168
YG P+YWM FF+ESSGA HP I D L ASAITW++ + +++K N
Sbjct: 6086 YGTPSYWMQTFFRESSGAEFHPVKITSKYSDSLAASAITWRDTDNSFLRVKVKETN 5919
Score = 55.6 bits (115), Expect(3) = 3e-024
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = +1 / -2
Query: 148 LRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKV 306
L +++VNFG AV+L I +L V GS+ TVLTSS + ENSF+ P V
Sbjct: 5819 LCLQIVNFGPDAVNLTIRAHQLRAAVDARGSRVTVLTSSDVMHENSFRNPRNV 5661
Score = 45.5 bits (93), Expect(3) = 3e-024
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +1 / -3
Query: 301 KVAPVSSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
+V PV+ + NAG++M A + PYS TSFDL LE K
Sbjct: 5395 QVVPVTRGLPNAGKEMQALLAPYSFTSFDLALEEYK 5288
>gb|BF586222.1|BF586222 FM1_27_C04.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 404
Score = 110 bits (235), Expect = 2e-023
Identities = 47/88 (53%), Positives = 60/88 (68%)
Frame = +1 / -2
Query: 145 YLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPVSSP 324
+LR+KVVNFG+ V L IS + L V GS TVLTS + +DENSF P KVAPV S
Sbjct: 403 FLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVKSQ 224
Query: 325 MANAGQQMGASVGPYSLTSFDLLLEPSK 408
++NAG+QM ++ P+S T+FDL L SK
Sbjct: 223 LSNAGEQMQVTLAPHSFTTFDLALAQSK 140
>gb|BG273345.1|BG273345 OV2_27_C04.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 464
Score = 107 bits (229), Expect = 1e-022
Identities = 45/91 (49%), Positives = 62/91 (68%)
Frame = +1 / +3
Query: 136 KSTYLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPV 315
++++LR+KV+NFG+ AV L IS L + GS TVLTS++ +DENSF P KV PV
Sbjct: 3 ENSFLRVKVINFGSDAVTLTISTTGLQASINALGSTATVLTSANVMDENSFSNPTKVVPV 182
Query: 316 SSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
S M+NA +QM ++ P+S +SFDL L SK
Sbjct: 183 KSDMSNAAEQMQVTLAPHSFSSFDLALAQSK 275
>gb|CF431297.1|CF431297 NIT1_5_G04.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_5_G04_A002 3', mRNA sequence
Length = 503
Score = 107 bits (229), Expect = 1e-022
Identities = 45/91 (49%), Positives = 62/91 (68%)
Frame = +1 / +3
Query: 136 KSTYLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAPV 315
++++LR+KV+NFG+ AV L IS L + GS TVLTS++ +DENSF P KV PV
Sbjct: 12 ENSFLRVKVINFGSDAVTLTISTTGLQASINALGSTATVLTSANVMDENSFSNPTKVVPV 191
Query: 316 SSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
S M+NA +QM ++ P+S +SFDL L SK
Sbjct: 192 KSDMSNAAEQMQVTLAPHSFSSFDLALAQSK 284
>gb|CW391258.1|CW391258 fsbb001f077f01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f077f01, DNA
sequence
Length = 660
Score = 60.2 bits (125), Expect(3) = 2e-021
Identities = 26/51 (50%), Positives = 32/51 (62%)
Frame = +1 / +3
Query: 154 IKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKV 306
++VVNFG+ V L IS + L V GS TVLTS + +DENSF P KV
Sbjct: 210 VQVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKV 362
Score = 48.3 bits (99), Expect(3) = 2e-021
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +1 / +3
Query: 301 KVAPVSSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
+VAPV S ++NAG+QM ++ P+S T+FDL L SK
Sbjct: 477 QVAPVKSQLSNAGEQMQVTLAPHSFTTFDLALAQSK 584
Score = 32.2 bits (64), Expect(3) = 2e-021
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1 / +1
Query: 49 GAILHPTAIQVSSYDQLVASAITWQNAKD 135
GA++HP + L ASAITWQ++++
Sbjct: 1 GAMIHPINMSSRYSSSLAASAITWQDSEN 87
>gb|BI075496.1|BI075496 IP1_21_C05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 459
Score = 98.7 bits (209), Expect(2) = 3e-021
Identities = 42/92 (45%), Positives = 59/92 (64%)
Frame = +1 / +2
Query: 133 DKSTYLRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKVAP 312
+ +++LR+K+VNF + A + IS L + + S TVLTS++ +DENSF P KV P
Sbjct: 38 ENNSFLRVKIVNFESDAARVTISTTGLESSIDVLRSTATVLTSTNVMDENSFSNPNKVVP 217
Query: 313 VSSPMANAGQQMGASVGPYSLTSFDLLLEPSK 408
V S + AG QM ++ P+S TSFDL L PSK
Sbjct: 218 VKSQLFEAGAQMQVTLAPHSFTSFDLALAPSK 313
Score = 23.5 bits (45), Expect(2) = 3e-021
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 97 LVASAITWQNAKDKS 141
L ASAITW+++++ S
Sbjct: 5 LAASAITWKDSENNS 49
>gb|CW360333.1|CW360333 fsbb001f028g01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f028g01, DNA
sequence
Length = 730
Score = 66.1 bits (138), Expect(2) = 5e-021
Identities = 26/56 (46%), Positives = 34/56 (60%)
Frame = +1 / +2
Query: 1 YGCPNYWMLHFFKESSGAILHPTAIQVSSYDQLVASAITWQNAKDKSTYLRIKVVN 168
YG P+YWM FF+ESSGA HP I D L ASAITW++ + +++K N
Sbjct: 257 YGTPSYWMQTFFRESSGAEFHPVKITSKYSDSLAASAITWRDTDNSFLRVKVKETN 424
Score = 55.6 bits (115), Expect(2) = 5e-021
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = +1 / +2
Query: 148 LRIKVVNFGNQAVDLNISVAELATGVKKSGSKQTVLTSSSPLDENSFQQPEKV 306
L +++VNFG AV+L I +L V GS+ TVLTSS + ENSF+ P V
Sbjct: 524 LCLQIVNFGPDAVNLTIRAHQLRAAVDARGSRVTVLTSSDVMHENSFRNPRNV 682
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 685,995,383
Number of Sequences: 832831
Number of extensions: 9923279
Number of successful extensions: 131537
Number of sequences better than 1.0e-020: 33
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 15195107151
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)