TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2969865.2.1
(675 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN148481.1|CN148481 WOUND1_56_H01.g1_A002 Wounded leaves... 245 5e-078
gb|CD228087.1|CD228087 CCC1_5_F05.g1_A007 Callus culture/ce... 245 1e-077
gb|CN148416.1|CN148416 WOUND1_56_H01.b1_A002 Wounded leaves... 245 4e-074
gb|CD229764.1|CD229764 CCC1_19_H12.g1_A007 Callus culture/c... 245 1e-073
gb|CD227978.1|CD227978 CCC1_5_F05.b1_A007 Callus culture/ce... 232 1e-071
gb|BG048961.1|BG048961 OV1_21_D05.g1_A002 Ovary 1 (OV1) Sor... 245 2e-068
gb|BG048656.1|BG048656 OV1_21_D05.b1_A002 Ovary 1 (OV1) Sor... 245 3e-066
gb|BE596069.1|BE596069 PI1_51_C11.g1_A002 Pathogen induced ... 217 2e-055
gb|BE596241.1|BE596241 PI1_51_C11.b1_A002 Pathogen induced ... 217 2e-055
gb|BF421288.1|BF421288 FM1_7_H02.g1_A003 Floral-Induced Mer... 215 5e-055
gb|CW102865.1|CW102865 104_471_11011572_116_34429_044 Sorgh... 95 8e-045
gb|BF421370.1|BF421370 FM1_7_H02.b1_A003 Floral-Induced Mer... 180 2e-044
gb|CW083471.1|CW083471 104_425_10944264_114_32351_084 Sorgh... 95 1e-039
gb|CW246898.1|CW246898 104_707_11221527_148_37606_052 Sorgh... 95 1e-039
gb|CW083472.1|CW083472 104_425_10944264_114_32387_084 Sorgh... 95 1e-039
gb|CW246897.1|CW246897 104_707_11221527_148_35088_052 Sorgh... 95 8e-038
gb|CW022584.1|CW022584 104_162_10431932_5_30000 Sorghum met... 95 2e-036
gb|CW161652.1|CW161652 104_568_11150526_148_36435_021 Sorgh... 96 7e-030
gb|CW266016.1|CW266016 104_735_11232200_148_35266_022 Sorgh... 96 4e-026
>gb|CN148481.1|CN148481 WOUND1_56_H01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_56_H01_A002 5', mRNA sequence
Length = 661
Score = 245 bits (529), Expect(5) = 5e-078
Identities = 98/115 (85%), Positives = 107/115 (93%)
Frame = -2 / -2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
S RVPE+NDDRIPTEEHLAYEP+ VHR+SLLLAFTGL YL PHLPN+L+NHVA+PI+GSH
Sbjct: 399 SVRVPENNDDRIPTEEHLAYEPIFVHRKSLLLAFTGLWYLSPHLPNILENHVAMPIKGSH 220
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGRQLEPSIWV 60
ATKQLLVVPAVDKNL I+LDAHHEH ERTGAELLFLL Y+GFFRHGRQLEP IWV
Sbjct: 219 ATKQLLVVPAVDKNLSIVLDAHHEH*ERTGAELLFLLLYIGFFRHGRQLEP*IWV 55
Score = 243 bits (525), Expect(4) = 1e-071
Identities = 105/124 (84%), Positives = 106/124 (85%)
Frame = +3 / +1
Query: 36 APPPSRRCHPD*RLQLAPMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKL 215
+PP HPD RLQLAPMA FSTGPLSVLMMSVKNNTQVLINCRNNKKL
Sbjct: 31 SPPRLASAHPDLRLQLAPMAEETNVKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKL 210
Query: 216 LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRN 395
LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRN
Sbjct: 211 LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRN 390
Query: 396 PK*V 407
P *V
Sbjct: 391 PN*V 402
Score = 240 bits (519), Expect(3) = 1e-066
Identities = 103/127 (81%), Positives = 106/127 (83%)
Frame = +2 / +3
Query: 32 RRAAAVSPLPPRLTAPIGAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQE 211
R AA S PPR TAPIGAHGGRNQ K+GGRGVQHRSSL AHDERQE Y GSYQLPEQQE
Sbjct: 27 RLAAPTSICPPRFTAPIGAHGGRNQCKEGGRGVQHRSSLSAHDERQEQYSGSYQLPEQQE 206
Query: 212 VAWSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQ 391
AWSR SL SALQHGS E *GDVD GT+DR*RQEEGS GEQ VHKQDVPPWGFGHHC Q
Sbjct: 207 AAWSRESL*SALQHGSREC*GDVD*GTKDR*RQEEGSSGEQR*VHKQDVPPWGFGHHCSQ 386
Query: 392 EPEMSSL 412
EPE+S L
Sbjct: 387 EPELSYL 407
Score = 228 bits (492), Expect(4) = 2e-065
Identities = 100/123 (81%), Positives = 102/123 (82%)
Frame = -3 / -3
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAR 227
T FGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKA
Sbjct: 401 TQFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAL 222
Query: 226 TRPSNFLLFRQLIRTWVLFLTLIMSTERGPXXXXXXXXXXXXXSAMGANWSRQSGWQRRD 47
TRPS+FLLFRQLIRT VLFLTLIMSTERGP SAMGANWSR+SGW
Sbjct: 221 TRPSSFLLFRQLIRT*VLFLTLIMSTERGPVLNSSSSFFTLVSSAMGANWSRKSGWADAS 42
Query: 46 GGG 38
GG
Sbjct: 41 RGG 33
Score = 146 bits (313), Expect(3) = 1e-037
Identities = 69/95 (72%), Positives = 73/95 (76%)
Frame = -1 / -1
Query: 411 RLLISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRR 232
R L SGS* Q**PNPHGGTSCL*T CSP EPSSCLY S+EPCC+AD+R
Sbjct: 406 R*LSSGS*EQ**PNPHGGTSCL*TYLCSPEEPSSCLYRSLVPQSTSP*HSREPCCNADQR 227
Query: 231 LARDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
L+RDQA SCCSGS**EP Y S*RSS*A REDRC*T
Sbjct: 226 LSRDQAASCCSGS**EPEYCS*RSS*ALREDRC*T 122
Score = 97.7 bits (207), Expect(2) = 8e-021
Identities = 44/52 (84%), Positives = 45/52 (86%)
Frame = +1 / +2
Query: 127 SSAPVLSRCS**ASRIIPRFLSTAGTTRSCLVACEPSIGTATWFLRTLGRCG 282
SSAPVLS+CS**ASR I RFLSTAGTTRSCLVA EP IG ATWF R LGRCG
Sbjct: 122 SSAPVLSQCS**ASRTILRFLSTAGTTRSCLVA*EPLIGIATWFSRMLGRCG 277
Score = 35.9 bits (72), Expect(5) = 5e-078
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -3 / -3
Query: 628 GTRDCRAEEVQEIAEHRVQVCYKKQNPALASCLKLNP 518
GT D + V +H VQV +K+ N L SCLK NP
Sbjct: 644 GTNDSCSGVVTTSKKHPVQVIHKR*NQVLPSCLK*NP 534
Score = 35.4 bits (71), Expect(5) = 5e-078
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / -2
Query: 506 CRDLHSHALSIWHTPYT 456
C LHSH LSIWHT Y+
Sbjct: 495 CHILHSHVLSIWHTYYS 445
Score = 35.0 bits (70), Expect(4) = 1e-071
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = +3 / +1
Query: 519 GFSLRQDARAGFCFL*QT*TRCSAISCTSSARQSLVP 629
GF LRQD R F L T*T C T+ +SLVP
Sbjct: 535 GFYLRQDGRTWFYLLWMT*TGCFFEVVTTPLHESLVP 645
Score = 29.9 bits (59), Expect(4) = 2e-065
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1 / -1
Query: 507 LPRLTLPCFEHLAYTL 460
+ LTL CFEHLAY L
Sbjct: 496 MSHLTLTCFEHLAYIL 449
Score = 29.5 bits (58), Expect(3) = 1e-066
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1 / +2
Query: 520 DSA*DRMLGLGFASCSRLEHD 582
D * RM+GLGF SC LE D
Sbjct: 536 DFT*GRMVGLGFTSCG*LELD 598
Score = 26.7 bits (52), Expect(5) = 5e-078
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -1 / -1
Query: 81 IGAVNLGGSGETAAARR 31
IGAVNLGG AARR
Sbjct: 76 IGAVNLGGQMLVGAARR 26
Score = 26.7 bits (52), Expect(4) = 2e-065
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1 / -1
Query: 585 SIVFKSATRSKTQP*HPVLS 526
+I FKS+TR KT+ HP S
Sbjct: 601 NIQFKSSTRGKTKSYHPASS 542
Score = 25.8 bits (50), Expect(3) = 1e-037
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1 / -3
Query: 78 GAVNLGGSGETAAARREG 25
G + GETAAARREG
Sbjct: 59 GWADASRGGETAAARREG 6
Score = 25.4 bits (49), Expect(4) = 1e-071
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 466 VCQMLKAWECK 498
VCQMLK ECK
Sbjct: 455 VCQMLKTCECK 487
Score = 25.4 bits (49), Expect(4) = 1e-071
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / +1
Query: 20 VHPSRRAAAVSP 55
V PSRRAAAVSP
Sbjct: 1 VLPSRRAAAVSP 36
Score = 24.9 bits (48), Expect(5) = 5e-078
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / -1
Query: 470 HTPYTQ*HNVLLANRLSTCT 411
H Y ++ +LA+RLSTCT
Sbjct: 466 HLAYILLYSNVLAHRLSTCT 407
Score = 23.5 bits (45), Expect(3) = 1e-066
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / +3
Query: 464 VYAKCSKHGSV 496
+YA+CSKH SV
Sbjct: 453 MYARCSKHVSV 485
Score = 23.5 bits (45), Expect(3) = 1e-037
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3 / -3
Query: 523 NPMANSAATYTPML*AFGIHLT 458
N + + +YT M *A GIH T
Sbjct: 512 NSGSGNVTSYTHMF*ASGIHTT 447
Score = 23.5 bits (45), Expect(2) = 8e-021
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / +2
Query: 33 DAPPPSRR 56
DAPPPSRR
Sbjct: 14 DAPPPSRR 37
Score = 22.6 bits (43), Expect(4) = 2e-065
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3 / -2
Query: 55 RRDGGGASRGMN 20
RRDGGGAS N
Sbjct: 36 RRDGGGASGRKN 1
>gb|CD228087.1|CD228087 CCC1_5_F05.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_5_F05_A007 5', mRNA sequence
Length = 664
Score = 245 bits (529), Expect(5) = 1e-077
Identities = 98/115 (85%), Positives = 107/115 (93%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
S RVPE+NDDRIPTEEHLAYEP+ VHR+SLLLAFTGL YL PHLPN+L+NHVA+PI+GSH
Sbjct: 424 SVRVPENNDDRIPTEEHLAYEPIFVHRKSLLLAFTGLWYLSPHLPNILENHVAMPIKGSH 245
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGRQLEPSIWV 60
ATKQLLVVPAVDKNL I+LDAHHEH ERTGAELLFLL Y+GFFRHGRQLEP IWV
Sbjct: 244 ATKQLLVVPAVDKNLSIVLDAHHEH*ERTGAELLFLLLYIGFFRHGRQLEP*IWV 80
Score = 239 bits (517), Expect(4) = 6e-070
Identities = 104/124 (83%), Positives = 105/124 (84%)
Frame = +3 / +2
Query: 36 APPPSRRCHPD*RLQLAPMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKL 215
+P HPD RLQLAPMA FSTGPLSVLMMSVKNNTQVLINCRNNKKL
Sbjct: 56 SPSRLASAHPDLRLQLAPMAEETNVKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKL 235
Query: 216 LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRN 395
LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRN
Sbjct: 236 LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRN 415
Query: 396 PK*V 407
P *V
Sbjct: 416 PN*V 427
Score = 236 bits (510), Expect(3) = 2e-065
Identities = 101/127 (79%), Positives = 104/127 (81%)
Frame = +2 / +1
Query: 32 RRAAAVSPLPPRLTAPIGAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQE 211
R A PPR TAPIGAHGGRNQ K+GGRGVQHRSSL AHDERQE Y GSYQLPEQQE
Sbjct: 52 RLAVPTRICPPRFTAPIGAHGGRNQCKEGGRGVQHRSSLSAHDERQEQYSGSYQLPEQQE 231
Query: 212 VAWSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQ 391
AWSR SL SALQHGS E *GDVD GT+DR*RQEEGS GEQ VHKQDVPPWGFGHHC Q
Sbjct: 232 AAWSRESL*SALQHGSREC*GDVD*GTKDR*RQEEGSSGEQR*VHKQDVPPWGFGHHCSQ 411
Query: 392 EPEMSSL 412
EPE+S L
Sbjct: 412 EPELSYL 432
Score = 225 bits (486), Expect(4) = 1e-065
Identities = 98/116 (84%), Positives = 100/116 (86%)
Frame = -3 / -2
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAR 227
T FGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKA
Sbjct: 426 TQFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAL 247
Query: 226 TRPSNFLLFRQLIRTWVLFLTLIMSTERGPXXXXXXXXXXXXXSAMGANWSRQSGW 59
TRPS+FLLFRQLIRT VLFLTLIMSTERGP SAMGANWSR+SGW
Sbjct: 246 TRPSSFLLFRQLIRT*VLFLTLIMSTERGPVLNSSSSFFTLVSSAMGANWSRKSGW 79
Score = 146 bits (313), Expect(3) = 5e-037
Identities = 69/95 (72%), Positives = 73/95 (76%)
Frame = -1 / -3
Query: 411 RLLISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRR 232
R L SGS* Q**PNPHGGTSCL*T CSP EPSSCLY S+EPCC+AD+R
Sbjct: 431 R*LSSGS*EQ**PNPHGGTSCL*TYLCSPEEPSSCLYRSLVPQSTSP*HSREPCCNADQR 252
Query: 231 LARDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
L+RDQA SCCSGS**EP Y S*RSS*A REDRC*T
Sbjct: 251 LSRDQAASCCSGS**EPEYCS*RSS*ALREDRC*T 147
Score = 97.7 bits (207), Expect(2) = 3e-021
Identities = 44/52 (84%), Positives = 45/52 (86%)
Frame = +1 / +3
Query: 127 SSAPVLSRCS**ASRIIPRFLSTAGTTRSCLVACEPSIGTATWFLRTLGRCG 282
SSAPVLS+CS**ASR I RFLSTAGTTRSCLVA EP IG ATWF R LGRCG
Sbjct: 147 SSAPVLSQCS**ASRTILRFLSTAGTTRSCLVA*EPLIGIATWFSRMLGRCG 302
Score = 35.4 bits (71), Expect(5) = 1e-077
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / -1
Query: 506 CRDLHSHALSIWHTPYT 456
C LHSH LSIWHT Y+
Sbjct: 520 CHILHSHVLSIWHTYYS 470
Score = 31.8 bits (63), Expect(5) = 1e-077
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3 / -2
Query: 586 EHRVQVCYKKQNPALASCLKLNP 518
+H VQV +K+ N L SCLK NP
Sbjct: 627 KHPVQVIHKR*NQVLPSCLK*NP 559
Score = 29.9 bits (59), Expect(5) = 1e-077
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1 / -2
Query: 78 GAVNLGGSGETAAARREG*TVGF 10
G + GETAAARREG T+G+
Sbjct: 84 GWADASRDGETAAARREGRTLGW 16
Score = 29.9 bits (59), Expect(4) = 6e-070
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3 / +2
Query: 519 GFSLRQDARAGFCFL*QT*TRCSAISCTSSARQSL 623
GF LRQD R F L T*T C T+ +SL
Sbjct: 560 GFYLRQDGRTWFYLLWMT*TGCFFEVVTTPLHESL 664
Score = 29.9 bits (59), Expect(4) = 1e-065
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1 / -3
Query: 507 LPRLTLPCFEHLAYTL 460
+ LTL CFEHLAY L
Sbjct: 521 MSHLTLTCFEHLAYIL 474
Score = 29.5 bits (58), Expect(3) = 2e-065
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1 / +3
Query: 520 DSA*DRMLGLGFASCSRLEHD 582
D * RM+GLGF SC LE D
Sbjct: 561 DFT*GRMVGLGFTSCG*LELD 623
Score = 28.1 bits (55), Expect(4) = 6e-070
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2 / +2
Query: 14 PTVHPSRRAAAVSP 55
P V PSRRAAAVSP
Sbjct: 20 PRVLPSRRAAAVSP 61
Score = 26.7 bits (52), Expect(4) = 1e-065
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1 / -3
Query: 585 SIVFKSATRSKTQP*HPVLS 526
+I FKS+TR KT+ HP S
Sbjct: 626 NIQFKSSTRGKTKSYHPASS 567
Score = 26.3 bits (51), Expect(4) = 1e-065
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1 / -3
Query: 81 IGAVNLGGSGETAAARR 31
IGAVNLGG ARR
Sbjct: 101 IGAVNLGGQMRVGTARR 51
Score = 25.4 bits (49), Expect(4) = 6e-070
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 466 VCQMLKAWECK 498
VCQMLK ECK
Sbjct: 480 VCQMLKTCECK 512
Score = 24.9 bits (48), Expect(5) = 1e-077
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / -3
Query: 470 HTPYTQ*HNVLLANRLSTCT 411
H Y ++ +LA+RLSTCT
Sbjct: 491 HLAYILLYSNVLAHRLSTCT 432
Score = 24.9 bits (48), Expect(2) = 3e-021
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3 / +3
Query: 12 TLQFIPLDAPPPSRR 56
+L F DAPPPSRR
Sbjct: 18 SLGFFLPDAPPPSRR 62
Score = 24.0 bits (46), Expect(3) = 5e-037
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -3 / -1
Query: 55 RRDGGGASRGMNCRV 11
RRDGGGAS N R+
Sbjct: 61 RRDGGGASGRKNPRL 17
Score = 23.5 bits (45), Expect(3) = 2e-065
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 464 VYAKCSKHGSV 496
+YA+CSKH SV
Sbjct: 478 MYARCSKHVSV 510
Score = 23.5 bits (45), Expect(3) = 5e-037
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3 / -2
Query: 523 NPMANSAATYTPML*AFGIHLT 458
N + + +YT M *A GIH T
Sbjct: 537 NSGSGNVTSYTHMF*ASGIHTT 472
>gb|CN148416.1|CN148416 WOUND1_56_H01.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_56_H01_A002 3', mRNA sequence
Length = 600
Score = 245 bits (529), Expect(4) = 4e-074
Identities = 98/115 (85%), Positives = 107/115 (93%)
Frame = -2 / -3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
S RVPE+NDDRIPTEEHLAYEP+ VHR+SLLLAFTGL YL PHLPN+L+NHVA+PI+GSH
Sbjct: 355 SVRVPENNDDRIPTEEHLAYEPIFVHRKSLLLAFTGLWYLSPHLPNILENHVAMPIKGSH 176
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGRQLEPSIWV 60
ATKQLLVVPAVDKNL I+LDAHHEH ERTGAELLFLL Y+GFFRHGRQLEP IWV
Sbjct: 175 ATKQLLVVPAVDKNLSIVLDAHHEH*ERTGAELLFLLLYIGFFRHGRQLEP*IWV 11
Score = 239 bits (516), Expect(3) = 9e-067
Identities = 103/116 (88%), Positives = 103/116 (88%)
Frame = +3 / +2
Query: 60 HPD*RLQLAPMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFD 239
HPD RLQLAPMA FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFD
Sbjct: 11 HPDLRLQLAPMAEETNVKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFD 190
Query: 240 RHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
RHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNP *V
Sbjct: 191 RHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPN*V 358
Score = 235 bits (507), Expect(3) = 1e-064
Identities = 98/116 (84%), Positives = 101/116 (87%)
Frame = +2 / +1
Query: 59 PPRLTAPIGAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLR 238
PPR TAPIGAHGGRNQ K+GGRGVQHRSSL AHDERQE Y GSYQLPEQQE AWSR SL
Sbjct: 10 PPRFTAPIGAHGGRNQCKEGGRGVQHRSSLSAHDERQEQYSGSYQLPEQQEAAWSRESL* 189
Query: 239 SALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
SALQHGS E *GDVD GT+DR*RQEEGS GEQ VHKQDVPPWGFGHHC QEPE+S
Sbjct: 190 SALQHGSREC*GDVD*GTKDR*RQEEGSSGEQR*VHKQDVPPWGFGHHCSQEPELS 357
Score = 225 bits (486), Expect(3) = 3e-063
Identities = 98/116 (84%), Positives = 100/116 (86%)
Frame = -3 / -1
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAR 227
T FGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKA
Sbjct: 357 TQFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAL 178
Query: 226 TRPSNFLLFRQLIRTWVLFLTLIMSTERGPXXXXXXXXXXXXXSAMGANWSRQSGW 59
TRPS+FLLFRQLIRT VLFLTLIMSTERGP SAMGANWSR+SGW
Sbjct: 177 TRPSSFLLFRQLIRT*VLFLTLIMSTERGPVLNSSSSFFTLVSSAMGANWSRKSGW 10
Score = 145 bits (312), Expect(2) = 4e-035
Identities = 68/93 (73%), Positives = 72/93 (77%)
Frame = -1 / -2
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
L SGS* Q**PNPHGGTSCL*T CSP EPSSCLY S+EPCC+AD+RL+
Sbjct: 356 LSSGS*EQ**PNPHGGTSCL*TYLCSPEEPSSCLYRSLVPQSTSP*HSREPCCNADQRLS 177
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQA SCCSGS**EP Y S*RSS*A REDRC*T
Sbjct: 176 RDQAASCCSGS**EPEYCS*RSS*ALREDRC*T 78
Score = 35.4 bits (71), Expect(4) = 4e-074
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / -3
Query: 506 CRDLHSHALSIWHTPYT 456
C LHSH LSIWHT Y+
Sbjct: 451 CHILHSHVLSIWHTYYS 401
Score = 31.8 bits (63), Expect(4) = 4e-074
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3 / -1
Query: 586 EHRVQVCYKKQNPALASCLKLNP 518
+H VQV +K+ N L SCLK NP
Sbjct: 558 KHPVQVIHKR*NQVLPSCLK*NP 490
Score = 29.9 bits (59), Expect(3) = 3e-063
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1 / -2
Query: 507 LPRLTLPCFEHLAYTL 460
+ LTL CFEHLAY L
Sbjct: 452 MSHLTLTCFEHLAYIL 405
Score = 29.5 bits (58), Expect(3) = 9e-067
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1 / +3
Query: 520 DSA*DRMLGLGFASCSRLEHD 582
D * RM+GLGF SC LE D
Sbjct: 492 DFT*GRMVGLGFTSCG*LELD 554
Score = 28.1 bits (55), Expect(3) = 1e-064
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3 / +2
Query: 519 GFSLRQDARAGFCFL*QT*TRC 584
GF LRQD R F L T*T C
Sbjct: 491 GFYLRQDGRTWFYLLWMT*TGC 556
Score = 26.7 bits (52), Expect(3) = 3e-063
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1 / -2
Query: 585 SIVFKSATRSKTQP*HPVLS 526
+I FKS+TR KT+ HP S
Sbjct: 557 NIQFKSSTRGKTKSYHPASS 498
Score = 25.4 bits (49), Expect(3) = 9e-067
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 466 VCQMLKAWECK 498
VCQMLK ECK
Sbjct: 411 VCQMLKTCECK 443
Score = 24.9 bits (48), Expect(4) = 4e-074
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / -2
Query: 470 HTPYTQ*HNVLLANRLSTCT 411
H Y ++ +LA+RLSTCT
Sbjct: 422 HLAYILLYSNVLAHRLSTCT 363
Score = 23.5 bits (45), Expect(3) = 1e-064
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 464 VYAKCSKHGSV 496
+YA+CSKH SV
Sbjct: 409 MYARCSKHVSV 441
Score = 23.5 bits (45), Expect(2) = 4e-035
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3 / -1
Query: 523 NPMANSAATYTPML*AFGIHLT 458
N + + +YT M *A GIH T
Sbjct: 468 NSGSGNVTSYTHMF*ASGIHTT 403
>gb|CD229764.1|CD229764 CCC1_19_H12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_19_H12_A007 5', mRNA sequence
Length = 569
Score = 245 bits (529), Expect(4) = 1e-073
Identities = 98/115 (85%), Positives = 107/115 (93%)
Frame = -2 / -2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
S RVPE+NDDRIPTEEHLAYEP+ VHR+SLLLAFTGL YL PHLPN+L+NHVA+PI+GSH
Sbjct: 415 SVRVPENNDDRIPTEEHLAYEPIFVHRKSLLLAFTGLWYLSPHLPNILENHVAMPIKGSH 236
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGRQLEPSIWV 60
ATKQLLVVPAVDKNL I+LDAHHEH ERTGAELLFLL Y+GFFRHGRQLEP IWV
Sbjct: 235 ATKQLLVVPAVDKNLSIVLDAHHEH*ERTGAELLFLLLYIGFFRHGRQLEP*IWV 71
Score = 239 bits (517), Expect(3) = 2e-066
Identities = 104/124 (83%), Positives = 105/124 (84%)
Frame = +3 / +2
Query: 36 APPPSRRCHPD*RLQLAPMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKL 215
+P HPD RLQLAPMA FSTGPLSVLMMSVKNNTQVLINCRNNKKL
Sbjct: 47 SPSRLASAHPDLRLQLAPMAEETNVKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKL 226
Query: 216 LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRN 395
LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRN
Sbjct: 227 LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRN 406
Query: 396 PK*V 407
P *V
Sbjct: 407 PN*V 418
Score = 236 bits (510), Expect(2) = 3e-062
Identities = 101/127 (79%), Positives = 104/127 (81%)
Frame = +2 / +1
Query: 32 RRAAAVSPLPPRLTAPIGAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQE 211
R A PPR TAPIGAHGGRNQ K+GGRGVQHRSSL AHDERQE Y GSYQLPEQQE
Sbjct: 43 RLAVPTRICPPRFTAPIGAHGGRNQCKEGGRGVQHRSSLSAHDERQEQYSGSYQLPEQQE 222
Query: 212 VAWSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQ 391
AWSR SL SALQHGS E *GDVD GT+DR*RQEEGS GEQ VHKQDVPPWGFGHHC Q
Sbjct: 223 AAWSRESL*SALQHGSREC*GDVD*GTKDR*RQEEGSSGEQR*VHKQDVPPWGFGHHCSQ 402
Query: 392 EPEMSSL 412
EPE+S L
Sbjct: 403 EPELSYL 423
Score = 225 bits (486), Expect(3) = 4e-063
Identities = 98/116 (84%), Positives = 100/116 (86%)
Frame = -3 / -3
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAR 227
T FGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKA
Sbjct: 417 TQFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAL 238
Query: 226 TRPSNFLLFRQLIRTWVLFLTLIMSTERGPXXXXXXXXXXXXXSAMGANWSRQSGW 59
TRPS+FLLFRQLIRT VLFLTLIMSTERGP SAMGANWSR+SGW
Sbjct: 237 TRPSSFLLFRQLIRT*VLFLTLIMSTERGPVLNSSSSFFTLVSSAMGANWSRKSGW 70
Score = 146 bits (313), Expect(3) = 5e-037
Identities = 69/95 (72%), Positives = 73/95 (76%)
Frame = -1 / -1
Query: 411 RLLISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRR 232
R L SGS* Q**PNPHGGTSCL*T CSP EPSSCLY S+EPCC+AD+R
Sbjct: 422 R*LSSGS*EQ**PNPHGGTSCL*TYLCSPEEPSSCLYRSLVPQSTSP*HSREPCCNADQR 243
Query: 231 LARDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
L+RDQA SCCSGS**EP Y S*RSS*A REDRC*T
Sbjct: 242 LSRDQAASCCSGS**EPEYCS*RSS*ALREDRC*T 138
Score = 97.7 bits (207), Expect(2) = 3e-021
Identities = 44/52 (84%), Positives = 45/52 (86%)
Frame = +1 / +3
Query: 127 SSAPVLSRCS**ASRIIPRFLSTAGTTRSCLVACEPSIGTATWFLRTLGRCG 282
SSAPVLS+CS**ASR I RFLSTAGTTRSCLVA EP IG ATWF R LGRCG
Sbjct: 138 SSAPVLSQCS**ASRTILRFLSTAGTTRSCLVA*EPLIGIATWFSRMLGRCG 293
Score = 35.4 bits (71), Expect(4) = 1e-073
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / -2
Query: 506 CRDLHSHALSIWHTPYT 456
C LHSH LSIWHT Y+
Sbjct: 511 CHILHSHVLSIWHTYYS 461
Score = 29.9 bits (59), Expect(4) = 1e-073
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1 / -3
Query: 78 GAVNLGGSGETAAARREG*TVGF 10
G + GETAAARREG T+G+
Sbjct: 75 GWADASRDGETAAARREGRTLGW 7
Score = 29.9 bits (59), Expect(3) = 4e-063
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1 / -1
Query: 507 LPRLTLPCFEHLAYTL 460
+ LTL CFEHLAY L
Sbjct: 512 MSHLTLTCFEHLAYIL 465
Score = 28.1 bits (55), Expect(3) = 2e-066
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2 / +2
Query: 14 PTVHPSRRAAAVSP 55
P V PSRRAAAVSP
Sbjct: 11 PRVLPSRRAAAVSP 52
Score = 26.3 bits (51), Expect(3) = 4e-063
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1 / -1
Query: 81 IGAVNLGGSGETAAARR 31
IGAVNLGG ARR
Sbjct: 92 IGAVNLGGQMRVGTARR 42
Score = 25.4 bits (49), Expect(3) = 2e-066
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 466 VCQMLKAWECK 498
VCQMLK ECK
Sbjct: 471 VCQMLKTCECK 503
Score = 24.9 bits (48), Expect(4) = 1e-073
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / -1
Query: 470 HTPYTQ*HNVLLANRLSTCT 411
H Y ++ +LA+RLSTCT
Sbjct: 482 HLAYILLYSNVLAHRLSTCT 423
Score = 24.9 bits (48), Expect(2) = 3e-021
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3 / +3
Query: 12 TLQFIPLDAPPPSRR 56
+L F DAPPPSRR
Sbjct: 9 SLGFFLPDAPPPSRR 53
Score = 24.0 bits (46), Expect(3) = 5e-037
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -3 / -2
Query: 55 RRDGGGASRGMNCRV 11
RRDGGGAS N R+
Sbjct: 52 RRDGGGASGRKNPRL 8
Score = 23.5 bits (45), Expect(2) = 3e-062
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 464 VYAKCSKHGSV 496
+YA+CSKH SV
Sbjct: 469 MYARCSKHVSV 501
Score = 23.5 bits (45), Expect(3) = 5e-037
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3 / -3
Query: 523 NPMANSAATYTPML*AFGIHLT 458
N + + +YT M *A GIH T
Sbjct: 528 NSGSGNVTSYTHMF*ASGIHTT 463
>gb|CD227978.1|CD227978 CCC1_5_F05.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_5_F05_A007 3', mRNA sequence
Length = 657
Score = 232 bits (502), Expect(4) = 1e-071
Identities = 93/109 (85%), Positives = 102/109 (93%)
Frame = -2 / -2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
S RVPE+NDDRIPTEEHLAYEP+ VHR+SLLLAFTGL YL PHLPN+L+NHVA+PI+GSH
Sbjct: 329 SVRVPENNDDRIPTEEHLAYEPIFVHRKSLLLAFTGLWYLSPHLPNILENHVAMPIKGSH 150
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGRQL 78
ATKQLLVVPAVDKNL I+LDAHHEH ERTGAELLFLL Y+GFFRHGRQL
Sbjct: 149 ATKQLLVVPAVDKNLSIVLDAHHEH*ERTGAELLFLLLYIGFFRHGRQL 3
Score = 227 bits (490), Expect(3) = 7e-065
Identities = 98/110 (89%), Positives = 98/110 (89%)
Frame = +3 / +3
Query: 78 QLAPMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 257
QLAPMA FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV
Sbjct: 3 QLAPMAEETNVKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 182
Query: 258 LENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
LENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNP *V
Sbjct: 183 LENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPN*V 332
Score = 223 bits (481), Expect(3) = 2e-061
Identities = 94/112 (83%), Positives = 97/112 (86%)
Frame = +2 / +2
Query: 77 PIGAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHG 256
PIGAHGGRNQ K+GGRGVQHRSSL AHDERQE Y GSYQLPEQQE AWSR SL SALQHG
Sbjct: 2 PIGAHGGRNQCKEGGRGVQHRSSLSAHDERQEQYSGSYQLPEQQEAAWSRESL*SALQHG 181
Query: 257 S*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMSSL 412
S E *GDVD GT+DR*RQEEGS GEQ VHKQDVPPWGFGHHC QEPE+S L
Sbjct: 182 SREC*GDVD*GTKDR*RQEEGSSGEQR*VHKQDVPPWGFGHHCSQEPELSYL 337
Score = 211 bits (455), Expect(3) = 5e-059
Identities = 93/110 (84%), Positives = 94/110 (85%)
Frame = -3 / -3
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAR 227
T FGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKA
Sbjct: 331 TQFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAL 152
Query: 226 TRPSNFLLFRQLIRTWVLFLTLIMSTERGPXXXXXXXXXXXXXSAMGANW 77
TRPS+FLLFRQLIRT VLFLTLIMSTERGP SAMGANW
Sbjct: 151 TRPSSFLLFRQLIRT*VLFLTLIMSTERGPVLNSSSSFFTLVSSAMGANW 2
Score = 146 bits (313), Expect(2) = 3e-035
Identities = 69/95 (72%), Positives = 73/95 (76%)
Frame = -1 / -1
Query: 411 RLLISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRR 232
R L SGS* Q**PNPHGGTSCL*T CSP EPSSCLY S+EPCC+AD+R
Sbjct: 336 R*LSSGS*EQ**PNPHGGTSCL*TYLCSPEEPSSCLYRSLVPQSTSP*HSREPCCNADQR 157
Query: 231 LARDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
L+RDQA SCCSGS**EP Y S*RSS*A REDRC*T
Sbjct: 156 LSRDQAASCCSGS**EPEYCS*RSS*ALREDRC*T 52
Score = 35.9 bits (72), Expect(4) = 1e-071
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -3 / -3
Query: 628 GTRDCRAEEVQEIAEHRVQVCYKKQNPALASCLKLNP 518
GT D + V +H VQV +K+ N L SCLK NP
Sbjct: 574 GTNDSCSGVVTTSKKHPVQVIHKR*NQVLPSCLK*NP 464
Score = 35.4 bits (71), Expect(4) = 1e-071
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / -2
Query: 506 CRDLHSHALSIWHTPYT 456
C LHSH LSIWHT Y+
Sbjct: 425 CHILHSHVLSIWHTYYS 375
Score = 35.0 bits (70), Expect(3) = 7e-065
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = +3 / +3
Query: 519 GFSLRQDARAGFCFL*QT*TRCSAISCTSSARQSLVP 629
GF LRQD R F L T*T C T+ +SLVP
Sbjct: 465 GFYLRQDGRTWFYLLWMT*TGCFFEVVTTPLHESLVP 575
Score = 29.9 bits (59), Expect(3) = 5e-059
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1 / -1
Query: 507 LPRLTLPCFEHLAYTL 460
+ LTL CFEHLAY L
Sbjct: 426 MSHLTLTCFEHLAYIL 379
Score = 29.5 bits (58), Expect(3) = 2e-061
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1 / +1
Query: 520 DSA*DRMLGLGFASCSRLEHD 582
D * RM+GLGF SC LE D
Sbjct: 466 DFT*GRMVGLGFTSCG*LELD 528
Score = 26.7 bits (52), Expect(3) = 5e-059
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1 / -1
Query: 585 SIVFKSATRSKTQP*HPVLS 526
+I FKS+TR KT+ HP S
Sbjct: 531 NIQFKSSTRGKTKSYHPASS 472
Score = 25.4 bits (49), Expect(3) = 7e-065
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 466 VCQMLKAWECK 498
VCQMLK ECK
Sbjct: 385 VCQMLKTCECK 417
Score = 24.9 bits (48), Expect(4) = 1e-071
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / -1
Query: 470 HTPYTQ*HNVLLANRLSTCT 411
H Y ++ +LA+RLSTCT
Sbjct: 396 HLAYILLYSNVLAHRLSTCT 337
Score = 23.5 bits (45), Expect(3) = 2e-061
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / +2
Query: 464 VYAKCSKHGSV 496
+YA+CSKH SV
Sbjct: 383 MYARCSKHVSV 415
Score = 23.5 bits (45), Expect(2) = 3e-035
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3 / -3
Query: 523 NPMANSAATYTPML*AFGIHLT 458
N + + +YT M *A GIH T
Sbjct: 442 NSGSGNVTSYTHMF*ASGIHTT 377
>gb|BG048961.1|BG048961 OV1_21_D05.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 461
Score = 245 bits (529), Expect(3) = 2e-068
Identities = 98/115 (85%), Positives = 107/115 (93%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
S RVPE+NDDRIPTEEHLAYEP+ VHR+SLLLAFTGL YL PHLPN+L+NHVA+PI+GSH
Sbjct: 368 SVRVPENNDDRIPTEEHLAYEPIFVHRKSLLLAFTGLWYLSPHLPNILENHVAMPIKGSH 189
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGRQLEPSIWV 60
ATKQLLVVPAVDKNL I+LDAHHEH ERTGAELLFLL Y+GFFRHGRQLEP IWV
Sbjct: 188 ATKQLLVVPAVDKNLSIVLDAHHEH*ERTGAELLFLLLYIGFFRHGRQLEP*IWV 24
Score = 243 bits (524), Expect(2) = 1e-064
Identities = 105/123 (85%), Positives = 105/123 (85%)
Frame = +3 / +3
Query: 39 PPPSRRCHPD*RLQLAPMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLL 218
PP HPD RLQLAPMA FSTGPLSVLMMSVKNNTQVLINCRNNKKLL
Sbjct: 3 PPRLASAHPDLRLQLAPMAEETNVKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLL 182
Query: 219 GRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNP 398
GRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNP
Sbjct: 183 GRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNP 362
Query: 399 K*V 407
*V
Sbjct: 363 N*V 371
Score = 237 bits (511), Expect(2) = 2e-062
Identities = 101/125 (80%), Positives = 104/125 (83%)
Frame = +2 / +2
Query: 38 AAAVSPLPPRLTAPIGAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVA 217
AA PPR TAPIGAHGGRNQ K+GGRGVQHRSSL AHDERQE Y GSYQLPEQQE A
Sbjct: 2 AAPTRICPPRFTAPIGAHGGRNQCKEGGRGVQHRSSLSAHDERQEQYSGSYQLPEQQEAA 181
Query: 218 WSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEP 397
WSR SL SALQHGS E *GDVD GT+DR*RQEEGS GEQ VHKQDVPPWGFGHHC QEP
Sbjct: 182 WSRESL*SALQHGSREC*GDVD*GTKDR*RQEEGSSGEQR*VHKQDVPPWGFGHHCSQEP 361
Query: 398 EMSSL 412
E+S L
Sbjct: 362 ELSYL 376
Score = 228 bits (492), Expect(2) = 2e-062
Identities = 100/123 (81%), Positives = 102/123 (82%)
Frame = -3 / -2
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAR 227
T FGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKA
Sbjct: 370 TQFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAL 191
Query: 226 TRPSNFLLFRQLIRTWVLFLTLIMSTERGPXXXXXXXXXXXXXSAMGANWSRQSGWQRRD 47
TRPS+FLLFRQLIRT VLFLTLIMSTERGP SAMGANWSR+SGW
Sbjct: 190 TRPSSFLLFRQLIRT*VLFLTLIMSTERGPVLNSSSSFFTLVSSAMGANWSRKSGWADAS 11
Query: 46 GGG 38
GG
Sbjct: 10 RGG 2
Score = 146 bits (313), Expect(3) = 6e-036
Identities = 69/95 (72%), Positives = 73/95 (76%)
Frame = -1 / -3
Query: 411 RLLISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRR 232
R L SGS* Q**PNPHGGTSCL*T CSP EPSSCLY S+EPCC+AD+R
Sbjct: 375 R*LSSGS*EQ**PNPHGGTSCL*TYLCSPEEPSSCLYRSLVPQSTSP*HSREPCCNADQR 196
Query: 231 LARDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
L+RDQA SCCSGS**EP Y S*RSS*A REDRC*T
Sbjct: 195 LSRDQAASCCSGS**EPEYCS*RSS*ALREDRC*T 91
Score = 32.7 bits (65), Expect(2) = 2e-062
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -1
Query: 497 LHSHALSIWHTPYT 456
LHSH LSIWHT Y+
Sbjct: 455 LHSHVLSIWHTYYS 414
Score = 29.5 bits (58), Expect(3) = 2e-068
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 498 LTLPCFEHLAYTL 460
LTL CFEHLAY L
Sbjct: 456 LTLTCFEHLAYIL 418
Score = 25.4 bits (49), Expect(2) = 1e-064
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 466 VCQMLKAWECK 498
VCQMLK ECK
Sbjct: 424 VCQMLKTCECK 456
Score = 24.9 bits (48), Expect(3) = 2e-068
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / -3
Query: 470 HTPYTQ*HNVLLANRLSTCT 411
H Y ++ +LA+RLSTCT
Sbjct: 435 HLAYILLYSNVLAHRLSTCT 376
Score = 23.5 bits (45), Expect(2) = 2e-062
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / +2
Query: 464 VYAKCSKHGSV 496
+YA+CSKH SV
Sbjct: 422 MYARCSKHVSV 454
Score = 23.5 bits (45), Expect(3) = 6e-036
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 81 IGAVNLGGSGETAAA 37
IGAVNLGG AA
Sbjct: 45 IGAVNLGGQMRVGAA 1
Score = 21.7 bits (41), Expect(3) = 6e-036
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3 / -2
Query: 499 TYTPML*AFGIHLT 458
+YT M *A GIH T
Sbjct: 457 SYTHMF*ASGIHTT 416
>gb|BG048656.1|BG048656 OV1_21_D05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 404
Score = 245 bits (529), Expect(2) = 3e-066
Identities = 98/115 (85%), Positives = 107/115 (93%)
Frame = -2 / -2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
S RVPE+NDDRIPTEEHLAYEP+ VHR+SLLLAFTGL YL PHLPN+L+NHVA+PI+GSH
Sbjct: 388 SVRVPENNDDRIPTEEHLAYEPIFVHRKSLLLAFTGLWYLSPHLPNILENHVAMPIKGSH 209
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGRQLEPSIWV 60
ATKQLLVVPAVDKNL I+LDAHHEH ERTGAELLFLL Y+GFFRHGRQLEP IWV
Sbjct: 208 ATKQLLVVPAVDKNLSIVLDAHHEH*ERTGAELLFLLLYIGFFRHGRQLEP*IWV 44
Score = 243 bits (525), Expect = 2e-063
Identities = 105/124 (84%), Positives = 106/124 (85%)
Frame = +3 / +2
Query: 36 APPPSRRCHPD*RLQLAPMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKL 215
+PP HPD RLQLAPMA FSTGPLSVLMMSVKNNTQVLINCRNNKKL
Sbjct: 20 SPPRLASAHPDLRLQLAPMAEETNVKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKL 199
Query: 216 LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRN 395
LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRN
Sbjct: 200 LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRN 379
Query: 396 PK*V 407
P *V
Sbjct: 380 PN*V 391
Score = 238 bits (514), Expect = 7e-062
Identities = 102/127 (80%), Positives = 105/127 (82%)
Frame = +2 / +1
Query: 32 RRAAAVSPLPPRLTAPIGAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQE 211
R AA PPR TAPIGAHGGRNQ K+GGRGVQHRSSL AHDERQE Y GSYQLPEQQE
Sbjct: 16 RLAAPTRICPPRFTAPIGAHGGRNQCKEGGRGVQHRSSLSAHDERQEQYSGSYQLPEQQE 195
Query: 212 VAWSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQ 391
AWSR SL SALQHGS E *GDVD GT+DR*RQEEGS GEQ VHKQDVPPWGFGHHC Q
Sbjct: 196 AAWSRESL*SALQHGSREC*GDVD*GTKDR*RQEEGSSGEQR*VHKQDVPPWGFGHHCSQ 375
Query: 392 EPEMSSL 412
EPE+S L
Sbjct: 376 EPELSYL 396
Score = 232 bits (500), Expect = 6e-060
Identities = 101/130 (77%), Positives = 105/130 (80%)
Frame = -3 / -3
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAR 227
T FGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKA
Sbjct: 390 TQFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAL 211
Query: 226 TRPSNFLLFRQLIRTWVLFLTLIMSTERGPXXXXXXXXXXXXXSAMGANWSRQSGWQRRD 47
TRPS+FLLFRQLIRT VLFLTLIMSTERGP SAMGANWSR+SGW
Sbjct: 210 TRPSSFLLFRQLIRT*VLFLTLIMSTERGPVLNSSSSFFTLVSSAMGANWSRKSGWADAS 31
Query: 46 GGGASRGMNC 17
GG + +C
Sbjct: 30 RGGETAAASC 1
Score = 146 bits (313), Expect = 4e-034
Identities = 69/95 (72%), Positives = 73/95 (76%)
Frame = -1 / -1
Query: 411 RLLISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRR 232
R L SGS* Q**PNPHGGTSCL*T CSP EPSSCLY S+EPCC+AD+R
Sbjct: 395 R*LSSGS*EQ**PNPHGGTSCL*TYLCSPEEPSSCLYRSLVPQSTSP*HSREPCCNADQR 216
Query: 231 LARDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
L+RDQA SCCSGS**EP Y S*RSS*A REDRC*T
Sbjct: 215 LSRDQAASCCSGS**EPEYCS*RSS*ALREDRC*T 111
Score = 28.1 bits (55), Expect(2) = 3e-066
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -1 / -1
Query: 81 IGAVNLGGSGETAAARR 31
IGAVNLGG AARR
Sbjct: 65 IGAVNLGGQMRVGAARR 15
>gb|BE596069.1|BE596069 PI1_51_C11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 618
Score = 217 bits (468), Expect = 2e-055
Identities = 91/93 (97%), Positives = 92/93 (98%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 172 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 351
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
KKKALPVNKDRFISKMFLRGDSVIIVLRNP *+
Sbjct: 352 KKKALPVNKDRFISKMFLRGDSVIIVLRNPN*L 450
Score = 177 bits (380), Expect = 2e-043
Identities = 76/88 (86%), Positives = 80/88 (90%)
Frame = -3 / -2
Query: 400 FGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTR 221
FGFLRTMMTESP RNILLMNLSLFTGRAFFLPLPV GTSVHIS TFS TMLQ RSKARTR
Sbjct: 443 FGFLRTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTR 264
Query: 220 PSNFLLFRQLIRTWVLFLTLIMSTERGP 137
PS+FLL RQL+ TWVLFLTLI+ T+RGP
Sbjct: 263 PSSFLLLRQLMSTWVLFLTLIIRTDRGP 180
Score = 111 bits (237), Expect = 1e-023
Identities = 48/98 (48%), Positives = 68/98 (69%)
Frame = -2 / -1
Query: 410 GYSFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEG 231
G S VP+++DDR+ EEHLA E +LVHR+SLL A L L PHLP+VL++HV V I+
Sbjct: 453 GQSVWVPQNDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKS 274
Query: 230 SHATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFL 117
++ K LVV A+D++LG++L+ HH +R A+ L L
Sbjct: 273 ANPAK*FLVVAAIDEHLGVVLNTHH*D*QRACAKFLLL 160
Score = 111 bits (237), Expect = 1e-023
Identities = 50/108 (46%), Positives = 69/108 (63%)
Frame = +2 / +3
Query: 80 IGAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS 259
+G G + K+ G G+ HR S+ +DE E +PG++QLP+QQE W + S L HG+
Sbjct: 123 LGDGG*ESGWKERGGGI*HRPSVSPNDEC*EQHPGAHQLPQQQETTWPGSRF*SPL*HGA 302
Query: 260 *ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEM 403
ER GDVDRG +D Q+EGS EQG +H+QDVP GHH +EP++
Sbjct: 303 RERAGDVDRGPQDWQGQKEGSACEQG*IHQQDVPQGRLGHHRSEEPKL 446
>gb|BE596241.1|BE596241 PI1_51_C11.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 533
Score = 217 bits (468), Expect = 2e-055
Identities = 91/93 (97%), Positives = 92/93 (98%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 172 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 351
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
KKKALPVNKDRFISKMFLRGDSVIIVLRNP *+
Sbjct: 352 KKKALPVNKDRFISKMFLRGDSVIIVLRNPN*L 450
Score = 177 bits (380), Expect = 2e-043
Identities = 76/88 (86%), Positives = 80/88 (90%)
Frame = -3 / -1
Query: 400 FGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTR 221
FGFLRTMMTESP RNILLMNLSLFTGRAFFLPLPV GTSVHIS TFS TMLQ RSKARTR
Sbjct: 443 FGFLRTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTR 264
Query: 220 PSNFLLFRQLIRTWVLFLTLIMSTERGP 137
PS+FLL RQL+ TWVLFLTLI+ T+RGP
Sbjct: 263 PSSFLLLRQLMSTWVLFLTLIIRTDRGP 180
Score = 111 bits (237), Expect = 1e-023
Identities = 50/108 (46%), Positives = 69/108 (63%)
Frame = +2 / +3
Query: 80 IGAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS 259
+G G + K+ G G+ HR S+ +DE E +PG++QLP+QQE W + S L HG+
Sbjct: 123 LGDGG*ESGWKERGGGI*HRPSVSPNDEC*EQHPGAHQLPQQQETTWPGSRF*SPL*HGA 302
Query: 260 *ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEM 403
ER GDVDRG +D Q+EGS EQG +H+QDVP GHH +EP++
Sbjct: 303 RERAGDVDRGPQDWQGQKEGSACEQG*IHQQDVPQGRLGHHRSEEPKL 446
Score = 111 bits (237), Expect = 1e-023
Identities = 48/98 (48%), Positives = 68/98 (69%)
Frame = -2 / -3
Query: 410 GYSFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEG 231
G S VP+++DDR+ EEHLA E +LVHR+SLL A L L PHLP+VL++HV V I+
Sbjct: 453 GQSVWVPQNDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKS 274
Query: 230 SHATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFL 117
++ K LVV A+D++LG++L+ HH +R A+ L L
Sbjct: 273 ANPAK*FLVVAAIDEHLGVVLNTHH*D*QRACAKFLLL 160
>gb|BF421288.1|BF421288 FM1_7_H02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 457
Score = 215 bits (464), Expect = 5e-055
Identities = 90/92 (97%), Positives = 91/92 (98%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 34 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 213
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
KKKALPVNKDRFISKMFLRGDSVIIVL+NP *
Sbjct: 214 KKKALPVNKDRFISKMFLRGDSVIIVLKNPN* 309
Score = 172 bits (370), Expect = 5e-042
Identities = 74/88 (84%), Positives = 78/88 (88%)
Frame = -3 / -3
Query: 400 FGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTR 221
FGF TMMTESP RNILLMNLSLFTGRAFFLPLPV GTSVHIS TFS TMLQ RSKARTR
Sbjct: 305 FGFFSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTR 126
Query: 220 PSNFLLFRQLIRTWVLFLTLIMSTERGP 137
PS+FLL RQL+ TWVLFLTLI+ T+RGP
Sbjct: 125 PSSFLLLRQLMSTWVLFLTLIIRTDRGP 42
Score = 106 bits (227), Expect = 3e-022
Identities = 47/98 (47%), Positives = 64/98 (65%)
Frame = +2 / +3
Query: 110 KKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVDRG 289
K+ G G+ HR + +DE E +PG++QLP+QQE W + S L HG+ ER GDVDRG
Sbjct: 15 KERGGGI*HRPPVSPNDEC*EQHPGAHQLPQQQEATWPGSCF*SPL*HGARERAGDVDRG 194
Query: 290 TEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEM 403
+D Q+EGS EQG +H+QDVP GHH +EP++
Sbjct: 195 PQDWQGQKEGSACEQG*IHQQDVPQG*LGHHRAEEPKL 308
Score = 104 bits (221), Expect = 2e-021
Identities = 47/98 (47%), Positives = 66/98 (67%)
Frame = -2 / -2
Query: 410 GYSFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEG 231
G S V + +DDR+ EEHLA E +LVHR+SLL A L L PHLP+VL++HV V I+
Sbjct: 315 GRSVWVLQHDDDRVTPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKS 136
Query: 230 SHATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFL 117
++ K LLVV A+D++LG++L+ HH + A+ L L
Sbjct: 135 TNPAK*LLVVAAIDEHLGVVLNTHH*D*QGACAKFLLL 22
>gb|CW102865.1|CW102865 104_471_11011572_116_34429_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11011572, DNA
sequence
Length = 705
Score = 94.5 bits (200), Expect(4) = 8e-045
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = -3 / -2
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 287
T FGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT
Sbjct: 602 TQFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 483
Score = 91.8 bits (194), Expect(3) = 2e-041
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +3 / +1
Query: 285 EVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
+VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNP *V
Sbjct: 481 QVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPN*V 603
Score = 91.8 bits (194), Expect(3) = 2e-041
Identities = 36/36 (100%), Positives = 36/36 (100%)
Frame = +3 / +3
Query: 183 VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 290
VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 288 VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 395
Score = 90.9 bits (192), Expect(3) = 3e-034
Identities = 35/42 (83%), Positives = 37/42 (88%)
Frame = +2 / +3
Query: 287 GTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMSSL 412
GT+DR*RQEEGS GEQ VHKQDVPPWGFGHHC QEPE+S L
Sbjct: 483 GTKDR*RQEEGSSGEQR*VHKQDVPPWGFGHHCSQEPELSYL 608
Score = 84.9 bits (179), Expect(3) = 4e-037
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYL 285
S RVPE+NDDRIPTEEHLAYEP+ VHR+SLLLAFTGL YL
Sbjct: 600 SVRVPENNDDRIPTEEHLAYEPIFVHRKSLLLAFTGLWYL 481
Score = 83.1 bits (175), Expect(4) = 8e-045
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = -2 / -2
Query: 290 YLGPHLPNVLKNHVAVPIEGSHATKQLLVVPAVDKNL 180
YL PHLPN+L+NHVA+PI+GSHATKQLLVVPAVDKNL
Sbjct: 395 YLSPHLPNILENHVAMPIKGSHATKQLLVVPAVDKNL 285
Score = 79.4 bits (167), Expect(3) = 4e-037
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -3 / -3
Query: 289 TSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRT 182
TSVHISLTFSRTMLQCRSKA TRPS+FLLFRQLIRT
Sbjct: 394 TSVHISLTFSRTMLQCRSKALTRPSSFLLFRQLIRT 287
Score = 70.3 bits (147), Expect(3) = 3e-034
Identities = 29/34 (85%), Positives = 29/34 (85%)
Frame = +1 / +1
Query: 181 RFLSTAGTTRSCLVACEPSIGTATWFLRTLGRCG 282
RFLSTAGTTRSCLVA EP IG ATWF R LGRCG
Sbjct: 286 RFLSTAGTTRSCLVA*EPLIGIATWFSRMLGRCG 387
Score = 68.9 bits (144), Expect(3) = 1e-023
Identities = 31/37 (83%), Positives = 31/37 (83%)
Frame = -1 / -3
Query: 411 RLLISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLY 301
R L SGS* Q**PNPHGGTSCL*T CSP EPSSCLY
Sbjct: 607 R*LSSGS*EQ**PNPHGGTSCL*TYLCSPEEPSSCLY 497
Score = 59.3 bits (123), Expect(3) = 1e-023
Identities = 22/27 (81%), Positives = 26/27 (96%)
Frame = -1 / -1
Query: 261 QEPCCSADRRLARDQATSCCSGS**EP 181
+EPCC+AD+RL+RDQA SCCSGS**EP
Sbjct: 366 REPCCNADQRLSRDQAASCCSGS**EP 286
Score = 35.4 bits (71), Expect(4) = 8e-045
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / -1
Query: 506 CRDLHSHALSIWHTPYT 456
C LHSH LSIWHT Y+
Sbjct: 696 CHILHSHVLSIWHTYYS 646
Score = 29.9 bits (59), Expect(3) = 4e-037
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1 / -3
Query: 507 LPRLTLPCFEHLAYTL 460
+ LTL CFEHLAY L
Sbjct: 697 MSHLTLTCFEHLAYIL 650
Score = 25.4 bits (49), Expect(3) = 2e-041
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 466 VCQMLKAWECK 498
VCQMLK ECK
Sbjct: 656 VCQMLKTCECK 688
Score = 24.9 bits (48), Expect(4) = 8e-045
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / -3
Query: 470 HTPYTQ*HNVLLANRLSTCT 411
H Y ++ +LA+RLSTCT
Sbjct: 667 HLAYILLYSNVLAHRLSTCT 608
Score = 23.5 bits (45), Expect(3) = 3e-034
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / +3
Query: 464 VYAKCSKHGSV 496
+YA+CSKH SV
Sbjct: 654 MYARCSKHVSV 686
Score = 22.6 bits (43), Expect(3) = 1e-023
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3 / -2
Query: 514 ANSAATYTPML*AFGIHLT 458
+ + +YT M *A GIH T
Sbjct: 704 SGNVTSYTHMF*ASGIHTT 648
>gb|BF421370.1|BF421370 FM1_7_H02.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 390
Score = 180 bits (387), Expect = 2e-044
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 169 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 348
Query: 309 KKKALPVNKDRFIS 350
KKKALPVNKDRFIS
Sbjct: 349 KKKALPVNKDRFIS 390
Score = 140 bits (300), Expect = 2e-032
Identities = 60/71 (84%), Positives = 64/71 (90%)
Frame = -3 / -2
Query: 349 LMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRTWVLF 170
LMNLSLFTGRAFFLPLPV GTSVHIS TFS TMLQ RSKARTRPS+FLL RQL+ TWVLF
Sbjct: 389 LMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMSTWVLF 210
Query: 169 LTLIMSTERGP 137
LTLI+ T+RGP
Sbjct: 209 LTLIIRTDRGP 177
>gb|CW083471.1|CW083471 104_425_10944264_114_32351_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944264, DNA
sequence
Length = 679
Score = 95.0 bits (201), Expect(2) = 1e-039
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +3 / -1
Query: 153 LMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 290
L ++V QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 412 LKLTVS*CIQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 275
Score = 89.5 bits (189), Expect(2) = 1e-039
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +3 / -1
Query: 288 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNP *+
Sbjct: 181 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPN*L 62
Score = 86.3 bits (182), Expect(2) = 3e-030
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = -3 / +3
Query: 400 FGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 287
FGFLRTMMTESP RNILLMNLSLFTGRAFFLPLPV GT
Sbjct: 69 FGFLRTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGT 182
Score = 66.6 bits (139), Expect(2) = 3e-030
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -3 / +3
Query: 304 LPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRT 182
L F TSVHIS TFS TMLQ RSKARTRPS+FLL RQL+ T
Sbjct: 261 LAEFITSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMST 383
>gb|CW246898.1|CW246898 104_707_11221527_148_37606_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221527, DNA
sequence
Length = 680
Score = 95.0 bits (201), Expect(2) = 1e-039
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +3 / +1
Query: 153 LMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 290
L ++V QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 292 LKLTVS*CIQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 429
Score = 89.5 bits (189), Expect(2) = 1e-039
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = +3 / +1
Query: 288 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VA 410
VPKTGKGKKKALPVNKDRFISKMFL GDSVIIVLRNP *+A
Sbjct: 523 VPKTGKGKKKALPVNKDRFISKMFLXGDSVIIVLRNPN*IA 645
Score = 88.1 bits (186), Expect(2) = 9e-031
Identities = 37/41 (90%), Positives = 37/41 (90%)
Frame = -3 / -1
Query: 409 ATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 287
A FGFLRTMMTESP RNILLMNLSLFTGRAFFLPLPV GT
Sbjct: 644 AIQFGFLRTMMTESPXRNILLMNLSLFTGRAFFLPLPVLGT 522
Score = 66.6 bits (139), Expect(2) = 9e-031
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -3 / -1
Query: 304 LPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRT 182
L F TSVHIS TFS TMLQ RSKARTRPS+FLL RQL+ T
Sbjct: 443 LAEFITSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMST 321
>gb|CW083472.1|CW083472 104_425_10944264_114_32387_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944264, DNA
sequence
Length = 629
Score = 95.0 bits (201), Expect(2) = 1e-039
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +3 / -1
Query: 153 LMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 290
L ++V QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 413 LKLTVS*CIQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 276
Score = 89.5 bits (189), Expect(2) = 1e-039
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +3 / -1
Query: 288 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNP *+
Sbjct: 182 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPN*L 63
Score = 86.3 bits (182), Expect(2) = 3e-030
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = -3 / +1
Query: 400 FGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 287
FGFLRTMMTESP RNILLMNLSLFTGRAFFLPLPV GT
Sbjct: 70 FGFLRTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGT 183
Score = 66.6 bits (139), Expect(2) = 3e-030
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -3 / +1
Query: 304 LPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRT 182
L F TSVHIS TFS TMLQ RSKARTRPS+FLL RQL+ T
Sbjct: 262 LAEFITSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMST 384
>gb|CW246897.1|CW246897 104_707_11221527_148_35088_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221527, DNA
sequence
Length = 738
Score = 95.0 bits (201), Expect(2) = 8e-038
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +3 / +2
Query: 153 LMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 290
L ++V QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 290 LKLTVS*CIQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 427
Score = 84.5 bits (178), Expect(2) = 1e-029
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = -3 / -1
Query: 400 FGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 287
+GFLRTMMTESP RNILLMNLSLFTGRAFFLPLPV GT
Sbjct: 633 WGFLRTMMTESPXRNILLMNLSLFTGRAFFLPLPVLGT 520
Score = 83.5 bits (176), Expect(2) = 8e-038
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +3 / +2
Query: 288 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 401
VPKTGKGKKKALPVNKDRFISKMFL GDSVIIVLR P+
Sbjct: 521 VPKTGKGKKKALPVNKDRFISKMFLXGDSVIIVLRKPQ 634
Score = 66.6 bits (139), Expect(2) = 1e-029
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -3 / -1
Query: 304 LPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRT 182
L F TSVHIS TFS TMLQ RSKARTRPS+FLL RQL+ T
Sbjct: 441 LAEFITSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMST 319
>gb|CW022584.1|CW022584 104_162_10431932_5_30000 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10431932, DNA
sequence
Length = 758
Score = 95.0 bits (201), Expect(2) = 2e-036
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +3 / +3
Query: 153 LMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 290
L ++V QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 171 LKLTVS*CIQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 308
Score = 80.3 bits (169), Expect(2) = 2e-028
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = -3 / -2
Query: 400 FGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 287
FGFLRTMMTESP RNILLMNLSLFTGRAFFLP + GT
Sbjct: 514 FGFLRTMMTESPXRNILLMNLSLFTGRAFFLPCQILGT 401
Score = 78.5 bits (165), Expect(2) = 2e-036
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = +3 / +3
Query: 288 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
VPK +GKKKALPVNKDRFISKMFL GDSVIIVLRNP *+
Sbjct: 402 VPKIWQGKKKALPVNKDRFISKMFLXGDSVIIVLRNPN*L 521
Score = 66.6 bits (139), Expect(2) = 2e-028
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -3 / -2
Query: 304 LPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRT 182
L F TSVHIS TFS TMLQ RSKARTRPS+FLL RQL+ T
Sbjct: 322 LAEFITSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMST 200
>gb|CW161652.1|CW161652 104_568_11150526_148_36435_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11150526, DNA
sequence
Length = 670
Score = 96.4 bits (204), Expect(3) = 7e-030
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +3 / +2
Query: 285 EVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRRESIC*QY 443
+VPKTGKGKK ALPVNKDRFISK+FLRG+ VIIVLR+PK*V+CTR ES+ Y
Sbjct: 320 QVPKTGKGKKAALPVNKDRFISKIFLRGNRVIIVLRDPK*VSCTRGESMSSMY 478
Score = 93.6 bits (198), Expect(3) = 1e-029
Identities = 41/48 (85%), Positives = 41/48 (85%)
Frame = -3 / -2
Query: 430 IDSLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 287
IDS RVQ THFG LRTMMT PRR ILLMNLSLFTGRA FLPLPVFGT
Sbjct: 465 IDSPRVQDTHFGSLRTMMTRFPRRKILLMNLSLFTGRAAFLPLPVFGT 322
Score = 91.3 bits (193), Expect(3) = 2e-027
Identities = 38/49 (77%), Positives = 43/49 (87%)
Frame = -2 / -1
Query: 431 NRLSTCTGYSFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYL 285
+RLSTCT YSFRVPE+NDD IPTEE+LAYEPV VH +S LLAFTGL +L
Sbjct: 466 HRLSTCTRYSFRVPENNDDSIPTEENLAYEPVFVHWKSRLLAFTGLWHL 320
Score = 83.5 bits (176), Expect(3) = 2e-021
Identities = 34/48 (70%), Positives = 35/48 (72%)
Frame = +2 / +1
Query: 287 GTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMSSLYT*RVY 430
G +DR*RQE GS EQ QVHKQD PPW HHC Q PEMS LYT RVY
Sbjct: 322 GAKDR*RQEGGSSSEQRQVHKQDFPPWESSHHCSQGPEMSILYTWRVY 465
Score = 49.6 bits (102), Expect(3) = 1e-029
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 286 SVHISLTFSRTMLQCRSKARTRPS 215
S HISLTFSR MLQCRSKA TRPS
Sbjct: 239 SPHISLTFSRNMLQCRSKALTRPS 168
Score = 48.7 bits (100), Expect(3) = 7e-030
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 216 LGRVRAFDRHCNMVLENVREM 278
LGRV AFDRHCNM LENVREM
Sbjct: 169 LGRVSAFDRHCNMFLENVREM 231
Score = 45.1 bits (92), Expect(3) = 2e-027
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = -2 / -2
Query: 278 HLPNVLKNHVAVPIEGSHATK 216
HLPNVL+ HVA+PI+G+HATK
Sbjct: 231 HLPNVLEKHVAMPIKGTHATK 169
Score = 35.0 bits (70), Expect(3) = 2e-021
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +2 / +3
Query: 212 VAWSRASLRSALQHGS*ER*GDV 280
+ WSR L SALQH S ER*GDV
Sbjct: 165 ITWSRECL*SALQHVSRER*GDV 233
Score = 25.8 bits (50), Expect(3) = 1e-029
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / -1
Query: 489 PCFEHLAYTLH 457
PCFEHLA +H
Sbjct: 505 PCFEHLAIGIH 473
Score = 24.9 bits (48), Expect(3) = 2e-027
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 498 LTLPCFEHLA 469
L +PCFEHLA
Sbjct: 570 LCMPCFEHLA 541
Score = 24.4 bits (47), Expect(3) = 7e-030
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2 / +3
Query: 458 CKVYAKCSKHGSV 496
C AKCSKHG +
Sbjct: 474 CMPIAKCSKHGQL 512
Score = 22.1 bits (42), Expect(3) = 2e-021
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +2
Query: 470 AKCSKHGSVSRGR 508
AKCSKHG S R
Sbjct: 542 AKCSKHGIHSTHR 580
>gb|CW266016.1|CW266016 104_735_11232200_148_35266_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232200, DNA
sequence
Length = 674
Score = 96.4 bits (204), Expect(3) = 4e-026
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +3 / +2
Query: 285 EVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRRESIC*QY 443
+VPKTGKGKK ALPVNKDRFISK+FLRG+ VIIVLR+PK*V+CTR ES+ Y
Sbjct: 131 QVPKTGKGKKAALPVNKDRFISKIFLRGNRVIIVLRDPK*VSCTRGESMSSMY 289
Score = 93.6 bits (198), Expect(3) = 2e-025
Identities = 41/48 (85%), Positives = 41/48 (85%)
Frame = -3 / -3
Query: 430 IDSLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 287
IDS RVQ THFG LRTMMT PRR ILLMNLSLFTGRA FLPLPVFGT
Sbjct: 276 IDSPRVQDTHFGSLRTMMTRFPRRKILLMNLSLFTGRAAFLPLPVFGT 133
Score = 91.3 bits (193), Expect(3) = 2e-023
Identities = 38/49 (77%), Positives = 43/49 (87%)
Frame = -2 / -2
Query: 431 NRLSTCTGYSFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYL 285
+RLSTCT YSFRVPE+NDD IPTEE+LAYEPV VH +S LLAFTGL +L
Sbjct: 277 HRLSTCTRYSFRVPENNDDSIPTEENLAYEPVFVHWKSRLLAFTGLWHL 131
Score = 35.9 bits (72), Expect(3) = 4e-026
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3 / +1
Query: 237 DRHCNMVLENVREM 278
DRHCNM LENVREM
Sbjct: 1 DRHCNMFLENVREM 42
Score = 35.0 bits (70), Expect(3) = 2e-025
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -3 / -1
Query: 286 SVHISLTFSRTMLQCR 239
S HISLTFSR MLQCR
Sbjct: 50 SPHISLTFSRNMLQCR 3
Score = 31.3 bits (62), Expect(3) = 2e-023
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -2 / -3
Query: 278 HLPNVLKNHVAVPI 237
HLPNVL+ HVA+PI
Sbjct: 42 HLPNVLEKHVAMPI 1
Score = 25.8 bits (50), Expect(3) = 2e-025
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / -2
Query: 489 PCFEHLAYTLH 457
PCFEHLA +H
Sbjct: 316 PCFEHLAIGIH 284
Score = 24.9 bits (48), Expect(3) = 2e-023
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 498 LTLPCFEHLA 469
L +PCFEHLA
Sbjct: 381 LCMPCFEHLA 352
Score = 24.4 bits (47), Expect(3) = 4e-026
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2 / +3
Query: 458 CKVYAKCSKHGSV 496
C AKCSKHG +
Sbjct: 285 CMPIAKCSKHGQL 323
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 799,090,324
Number of Sequences: 832831
Number of extensions: 11594859
Number of successful extensions: 113519
Number of sequences better than 1.0e-020: 25
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 20198325940
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)