TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950089.2.2
(1044 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN127375.1|CN127375 RHOH1_22_D12.g3_A002 Acid- and alkal... 425 e-123
gb|CD226397.1|CD226397 CCC1_45_B08.g1_A007 Callus culture/c... 423 e-118
gb|CD431545.1|CD431545 ETH1_9_C03.g1_A002 Ethylene-treated ... 352 2e-096
gb|CD226376.1|CD226376 CCC1_45_B08.b1_A007 Callus culture/c... 300 2e-093
gb|AW678479.1|AW678479 WS1_16_E03.b1_A002 Water-stressed 1 ... 319 4e-086
gb|CW165736.1|CW165736 104_574_11152669_148_36480_059 Sorgh... 192 3e-073
gb|BM324869.1|BM324869 PIC1_36_H02.b1_A002 Pathogen-infecte... 269 7e-071
gb|CD431488.1|CD431488 ETH1_9_C03.b1_A002 Ethylene-treated ... 208 2e-066
gb|CN126731.1|CN126731 RHOH1_18_G11.g1_A002 Acid- and alkal... 235 5e-065
gb|AW678587.1|AW678587 WS1_16_E03.g1_A002 Water-stressed 1 ... 200 5e-064
gb|BF587278.1|BF587278 FM1_34_D12.b1_A003 Floral-Induced Me... 209 6e-053
gb|BG817396.1|BG817396 EM1_75_D03.b1_A002 Embryo 1 (EM1) So... 208 1e-052
gb|CF073329.1|CF073329 FE1_22_C10.g1_A002 Iron-deficient se... 149 7e-049
gb|BI075210.1|BI075210 IP1_17_E01.b1_A002 Immature pannicle... 183 3e-045
gb|BM329363.1|BM329363 PIC1_36_H02.g1_A002 Pathogen-infecte... 120 1e-039
gb|CW486008.1|CW486008 fsbb001f249a14f0 Sorghum methylation... 74 2e-031
gb|CW165735.1|CW165735 104_574_11152669_116_36484_059 Sorgh... 116 4e-025
gb|CF769332.1|CF769332 DSBF1_1_B03.b1_A010 Drought-stressed... 65 1e-024
gb|CF770196.1|CF770196 DSBF1_6_F05.b1_A010 Drought-stressed... 65 1e-024
gb|CF769417.1|CF769417 DSBF1_1_B03.g1_A010 Drought-stressed... 65 1e-024
gb|CF770272.1|CF770272 DSBF1_6_F05.g1_A010 Drought-stressed... 65 1e-024
gb|CW451391.1|CW451391 fsbb001f191h03f0 Sorghum methylation... 74 2e-024
gb|CW113797.1|CW113797 104_488_11105645_116_34559_027 Sorgh... 110 4e-023
gb|CW190211.1|CW190211 104_611_11174383_148_36750_020 Sorgh... 110 4e-023
gb|CW211376.1|CW211376 104_642_11190476_116_37017_078 Sorgh... 95 4e-023
gb|CW329729.1|CW329729 104_826_11479998_148_35997_025 Sorgh... 80 4e-023
gb|CW211377.1|CW211377 104_642_11190476_148_37016_078 Sorgh... 71 4e-022
gb|CW162368.1|CW162368 104_569_11150905_148_36439_005 Sorgh... 61 4e-022
>gb|CN127375.1|CN127375 RHOH1_22_D12.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_22_D12_A002 5', mRNA sequence
Length = 760
Score = 425 bits (923), Expect(4) = e-123
Identities = 172/198 (86%), Positives = 175/198 (88%)
Frame = +2 / +1
Query: 98 SKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITL 277
SKMGSGSFLKVLA NFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITL
Sbjct: 61 SKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITL 240
Query: 278 FELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQIVNIWYIPRN 457
FELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRP FVNRQIVNIWY+PRN
Sbjct: 241 FELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPTFVNRQIVNIWYVPRN 420
Query: 458 EKLGKSDDVLSAAERYIEQNGPEAFEXXXXXXXXXXXXXXXXXXXLEDGEAENRAKAERE 637
EKLGKSDDVLSAAERYIEQNGPEAFE LE+ EAENRAKAERE
Sbjct: 421 EKLGKSDDVLSAAERYIEQNGPEAFEKLISKSTKSSKSRNTKRSILEEAEAENRAKAERE 600
Query: 638 SWGENPFYDKNYRY*TSS 691
SW ENPFYDKNYRY*T+S
Sbjct: 601 SWDENPFYDKNYRY*TTS 654
Score = 385 bits (835), Expect(3) = e-107
Identities = 172/198 (86%), Positives = 177/198 (89%)
Frame = -1 / -3
Query: 690 ELV*YL*FLS*KGFSPHDSLSALARFSASPSSKFNRXXXXXXXXXXXXLMSFSNASGPFC 511
++V*YL*FLS*KGFS HDSLSALA FSAS SSK +R LMSFSNASGPFC
Sbjct: 653 DVV*YL*FLS*KGFSSHDSLSALALFSASASSKIDRFVFLDFEDFVDLLMSFSNASGPFC 474
Query: 510 SIYLSAADRTSSDLPSFSFLGIYHMFTIWRFTNIGRTKWS*T*AAPLNQGKTNQQLKNSF 331
SIYLSAADRTSSDLPSFSFLG YHMFTIWRFTN+GRTKWS*T*AAPLNQGKTNQQLKN+F
Sbjct: 473 SIYLSAADRTSSDLPSFSFLGTYHMFTIWRFTNVGRTKWS*T*AAPLNQGKTNQQLKNNF 294
Query: 330 AYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*SSTGFFVSIALTEAYRG*ASDMSGPAR 151
AYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC SSTGF VSIALTEAYRG ASDMSGPAR
Sbjct: 293 AYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHCWSSTGFLVSIALTEAYRGYASDMSGPAR 114
Query: 150 TSKFLASTLRKDPDPILL 97
TSK LASTLRKDPDPILL
Sbjct: 113 TSKLLASTLRKDPDPILL 60
Score = 359 bits (778), Expect(2) = 2e-098
Identities = 158/196 (80%), Positives = 163/196 (83%)
Frame = -3 / -2
Query: 685 GLVSVVFVVEGIFAPRXXXXXXXXXXXXXLQVQPLCVPXXXXXXXLADELLKCFWSVLFN 506
GLVSV+FVVEGIF PR LQ +PLCVP LADELLKCF S+L N
Sbjct: 648 GLVSVIFVVEGIFIPRFSFSLSSVFSLCLLQDRPLCVP*F*RLCRLADELLKCFRSILLN 469
Query: 505 ISLCS*QNIIRFT*LLISWNIPYVHYLAVHKHWPHKMVVNIGSTIEPRQDQPAVKEQLCI 326
ISLCS*QNIIRFT*LLI WNIPYVHYLAVHK WPHKMVVNI STIEPR DQPAVKEQLCI
Sbjct: 468 ISLCS*QNIIRFT*LLIPWNIPYVHYLAVHKRWPHKMVVNISSTIEPR*DQPAVKEQLCI 289
Query: 325 *PKWKPLDNWSKS*LKQSDK*VQHPVSEPLLIIYRIFCLYCSNRSI*RISK*YEWPGKDI 146
*PKWKPLDNWSKS*LKQSDK*VQHPVSEPLL+IYRIF LYCSNRSI*RI K*YEWP DI
Sbjct: 288 *PKWKPLDNWSKS*LKQSDK*VQHPVSEPLLVIYRIFGLYCSNRSI*RICK*YEWPC*DI 109
Query: 145 EVLGQHLEERSGPHLA 98
EV+ QHLEERSGPHLA
Sbjct: 108 EVVSQHLEERSGPHLA 61
Score = 330 bits (714), Expect(3) = 4e-094
Identities = 140/169 (82%), Positives = 149/169 (88%)
Frame = +1 / +3
Query: 88 RSREQDGVRIFPQGAGQELRCPCRATHITCLSSICFC*SNRDKKSCR*SAVAHLLGVVLI 267
+ REQDGVRIFPQGAG +LRCP RATHITC+SSICFC*SNRD+KSCR* AVAHLLGVVLI
Sbjct: 51 QGREQDGVRIFPQGAG*QLRCPSRATHITCISSICFC*SNRDQKSCR*PAVAHLLGVVLI 230
Query: 268 YHFV*ANFCSNYRVASILVICKXXXXXXXXXXXXQWCCLCLRPFCAANVCEPPNSEHMVY 447
YHFV*ANFCSNYRVASILVICK QWCCLCLRPFCAANVCEPPNSEHMV
Sbjct: 231 YHFV*ANFCSNYRVASILVICKVVL*LLVGLTLVQWCCLCLRPFCAANVCEPPNSEHMVC 410
Query: 448 SKK*EAR*I**CSVSCREIY*TKRTRSI*EAHQQVYEVFEVKEHKAVEL 594
SK+*EAR*I**CSVSCREIY* K T SI*EAHQQVY+VF++KEHKAV+L
Sbjct: 411 SKE*EAR*I**CSVSCREIY*AKWTGSI*EAHQQVYKVFKIKEHKAVDL 557
Score = 294 bits (637), Expect(2) = 6e-091
Identities = 135/150 (90%), Positives = 137/150 (91%)
Frame = -2 / -1
Query: 542 *ASQMLLVRFVQYISLQLTEHHQIYLASHFLEYTICSLFGGSQTLAAQNGRKHRQHH*TK 363
*ASQML V F QYISLQLTEHHQIYLASH LE+TICSLFGGSQTLAAQNGRKH+QHH*TK
Sbjct: 505 *ASQMLPVHFAQYISLQLTEHHQIYLASHSLEHTICSLFGGSQTLAAQNGRKHKQHH*TK 326
Query: 362 ARPTSS*RTALHMTKMEATR*LEQKLAQTK**MSTTPSK*ATADHLQDFLSLLL*QKHIE 183
RPTSS*RT LHMTKMEATR*LEQKLAQTK**MSTTPSK*ATA HLQDF SLLL*QKHIE
Sbjct: 325 VRPTSS*RTTLHMTKMEATR*LEQKLAQTK**MSTTPSK*ATAGHLQDFWSLLL*QKHIE 146
Query: 182 DKQVI*VARQGHRSSWPAP*GKIRTPSCSL 93
D QVI*VA GHRS PAP*GKIRTPSCSL
Sbjct: 145 DMQVI*VALLGHRSC*PAP*GKIRTPSCSL 56
Score = 205 bits (442), Expect(2) = 7e-068
Identities = 90/121 (74%), Positives = 97/121 (80%)
Frame = +3 / +2
Query: 324 HMQSCSLTAGWSCLGSMVLPMFTTILCGQCL*TAK**TYGIFQEMRS*VNLMMFCQLQRD 503
HMQSCSLTAGWS LGSMVL MFTTILCGQ L*TAK**TYG+FQ MRS*VNLMMFCQLQRD
Sbjct: 287 HMQSCSLTAGWSYLGSMVLLMFTTILCGQRL*TAK**TYGMFQGMRS*VNLMMFCQLQRD 466
Query: 504 ILNKTDQKHXXXXXXXXXXXXXQGTQSG*TWRMERLKIELKPRENRGAKIPSTTKTTDTK 683
IL+K D+KH QGTQSG +WR +RLK EL+ +ENRG KIPSTTK TDTK
Sbjct: 467 ILSKMDRKHLRSSSASLQSLQNQGTQSGRSWRRQRLKTELRLKENRGMKIPSTTKITDTK 646
Query: 684 P 686
P
Sbjct: 647 P 649
Score = 74.4 bits (156), Expect(2) = 7e-068
Identities = 33/48 (68%), Positives = 33/48 (68%)
Frame = +3 / +2
Query: 99 ARWGPDLSSRCWPRTSMSLPGHSYHXXXXXXXXXEQ*RQKIL*MISSG 242
ARWGPDLSSRCW TSMS GHSYH EQ*R KIL*M SSG
Sbjct: 62 ARWGPDLSSRCWLTTSMS*QGHSYHLHILYMLLLEQ*RPKIL*MTSSG 205
Score = 62.0 bits (129), Expect(2) = 6e-091
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = -2 / -1
Query: 686 WFSICSFCRRRDFRPTILSRL*LDFQPLHPP 594
WFSIC+FCRRRDF PTIL + *L FQPL PP
Sbjct: 649 WFSICNFCRRRDFHPTILFQP*LCFQPLPPP 557
Score = 32.7 bits (65), Expect(3) = 4e-094
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / +3
Query: 637 IVGRKSLLRQKLQILN 684
IVG KSLLRQKLQILN
Sbjct: 600 IVG*KSLLRQKLQILN 647
Score = 29.0 bits (57), Expect(4) = e-123
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2 / +2
Query: 683 TSSKSTQQFEDDLAHEPHASFSCV 754
T + + DLA+EPHASFS V
Sbjct: 641 TKPRPLGSLKTDLAYEPHASFSRV 712
Score = 27.2 bits (53), Expect(4) = e-123
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 754 RTEDDIPIFLT 786
RTEDD PIFLT
Sbjct: 715 RTEDDFPIFLT 747
Score = 24.0 bits (46), Expect(3) = 4e-094
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +2
Query: 761 KTTFPYF*L 787
KTTFPYF*L
Sbjct: 722 KTTFPYF*L 748
Score = 23.1 bits (44), Expect(3) = e-107
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -3 / -1
Query: 790 SESEIWECRLR 758
+ESEIWE RL+
Sbjct: 751 TESEIWESRLQ 719
Score = 22.6 bits (43), Expect(3) = e-107
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1 / -2
Query: 753 TQLKLA*GS*ARS 715
T+LKLA GS*ARS
Sbjct: 711 TRLKLAWGS*ARS 673
Score = 22.6 bits (43), Expect(4) = e-123
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 69 SSVLLEEEQRAR 104
SSVLLEEE++ R
Sbjct: 24 SSVLLEEEEQGR 59
Score = 22.1 bits (42), Expect(2) = 2e-098
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / -2
Query: 792 IQSQKYGNVVF 760
+ SQKYG VVF
Sbjct: 753 VLSQKYGKVVF 721
>gb|CD226397.1|CD226397 CCC1_45_B08.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_45_B08_A007 5', mRNA sequence
Length = 660
Score = 423 bits (919), Expect(2) = e-118
Identities = 171/197 (86%), Positives = 174/197 (88%)
Frame = +2 / +3
Query: 98 SKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITL 277
SKMGSGSFLKVLA NFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITL
Sbjct: 69 SKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITL 248
Query: 278 FELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQIVNIWYIPRN 457
FELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRP FVNRQIVNIWY+PRN
Sbjct: 249 FELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPTFVNRQIVNIWYVPRN 428
Query: 458 EKLGKSDDVLSAAERYIEQNGPEAFEXXXXXXXXXXXXXXXXXXXLEDGEAENRAKAERE 637
EKLGKSDDVLSAAERYIEQNGPEAFE LE+ EAENRAKAERE
Sbjct: 429 EKLGKSDDVLSAAERYIEQNGPEAFEKLISKSTKSSKSRNTKRSILEEAEAENRAKAERE 608
Query: 638 SWGENPFYDKNYRY*TS 688
SW ENPFYDKNYRY*T+
Sbjct: 609 SWDENPFYDKNYRY*TT 659
Score = 384 bits (833), Expect = e-105
Identities = 172/197 (87%), Positives = 176/197 (89%)
Frame = -1 / -3
Query: 687 LV*YL*FLS*KGFSPHDSLSALARFSASPSSKFNRXXXXXXXXXXXXLMSFSNASGPFCS 508
+V*YL*FLS*KGFS HDSLSALA FSAS SSK +R LMSFSNASGPFCS
Sbjct: 658 VV*YL*FLS*KGFSSHDSLSALALFSASASSKIDRFVFLDFEDFVDLLMSFSNASGPFCS 479
Query: 507 IYLSAADRTSSDLPSFSFLGIYHMFTIWRFTNIGRTKWS*T*AAPLNQGKTNQQLKNSFA 328
IYLSAADRTSSDLPSFSFLG YHMFTIWRFTN+GRTKWS*T*AAPLNQGKTNQQLKN+FA
Sbjct: 478 IYLSAADRTSSDLPSFSFLGTYHMFTIWRFTNVGRTKWS*T*AAPLNQGKTNQQLKNNFA 299
Query: 327 YDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*SSTGFFVSIALTEAYRG*ASDMSGPART 148
YDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC SSTGF VSIALTEAYRG ASDMSGPART
Sbjct: 298 YDQNGSHSIIGAKVSSNKVINEYNTQ*VSHCWSSTGFLVSIALTEAYRGYASDMSGPART 119
Query: 147 SKFLASTLRKDPDPILL 97
SK LASTLRKDPDPILL
Sbjct: 118 SKLLASTLRKDPDPILL 68
Score = 359 bits (778), Expect = 4e-098
Identities = 158/196 (80%), Positives = 163/196 (83%)
Frame = -3 / -2
Query: 685 GLVSVVFVVEGIFAPRXXXXXXXXXXXXXLQVQPLCVPXXXXXXXLADELLKCFWSVLFN 506
GLVSV+FVVEGIF PR LQ +PLCVP LADELLKCF S+L N
Sbjct: 656 GLVSVIFVVEGIFIPRFSFSLSSVFSLCLLQDRPLCVP*F*RLCRLADELLKCFRSILLN 477
Query: 505 ISLCS*QNIIRFT*LLISWNIPYVHYLAVHKHWPHKMVVNIGSTIEPRQDQPAVKEQLCI 326
ISLCS*QNIIRFT*LLI WNIPYVHYLAVHK WPHKMVVNI STIEPR DQPAVKEQLCI
Sbjct: 476 ISLCS*QNIIRFT*LLIPWNIPYVHYLAVHKRWPHKMVVNISSTIEPR*DQPAVKEQLCI 297
Query: 325 *PKWKPLDNWSKS*LKQSDK*VQHPVSEPLLIIYRIFCLYCSNRSI*RISK*YEWPGKDI 146
*PKWKPLDNWSKS*LKQSDK*VQHPVSEPLL+IYRIF LYCSNRSI*RI K*YEWP DI
Sbjct: 296 *PKWKPLDNWSKS*LKQSDK*VQHPVSEPLLVIYRIFGLYCSNRSI*RICK*YEWPC*DI 117
Query: 145 EVLGQHLEERSGPHLA 98
EV+ QHLEERSGPHLA
Sbjct: 116 EVVSQHLEERSGPHLA 69
Score = 330 bits (714), Expect(2) = 1e-092
Identities = 140/169 (82%), Positives = 149/169 (88%)
Frame = +1 / +2
Query: 88 RSREQDGVRIFPQGAGQELRCPCRATHITCLSSICFC*SNRDKKSCR*SAVAHLLGVVLI 267
+ REQDGVRIFPQGAG +LRCP RATHITC+SSICFC*SNRD+KSCR* AVAHLLGVVLI
Sbjct: 59 QGREQDGVRIFPQGAG*QLRCPSRATHITCISSICFC*SNRDQKSCR*PAVAHLLGVVLI 238
Query: 268 YHFV*ANFCSNYRVASILVICKXXXXXXXXXXXXQWCCLCLRPFCAANVCEPPNSEHMVY 447
YHFV*ANFCSNYRVASILVICK QWCCLCLRPFCAANVCEPPNSEHMV
Sbjct: 239 YHFV*ANFCSNYRVASILVICKVVL*LLVGLTLVQWCCLCLRPFCAANVCEPPNSEHMVC 418
Query: 448 SKK*EAR*I**CSVSCREIY*TKRTRSI*EAHQQVYEVFEVKEHKAVEL 594
SK+*EAR*I**CSVSCREIY* K T SI*EAHQQVY+VF++KEHKAV+L
Sbjct: 419 SKE*EAR*I**CSVSCREIY*AKWTGSI*EAHQQVYKVFKIKEHKAVDL 565
Score = 294 bits (637), Expect(2) = 6e-091
Identities = 135/150 (90%), Positives = 137/150 (91%)
Frame = -2 / -1
Query: 542 *ASQMLLVRFVQYISLQLTEHHQIYLASHFLEYTICSLFGGSQTLAAQNGRKHRQHH*TK 363
*ASQML V F QYISLQLTEHHQIYLASH LE+TICSLFGGSQTLAAQNGRKH+QHH*TK
Sbjct: 513 *ASQMLPVHFAQYISLQLTEHHQIYLASHSLEHTICSLFGGSQTLAAQNGRKHKQHH*TK 334
Query: 362 ARPTSS*RTALHMTKMEATR*LEQKLAQTK**MSTTPSK*ATADHLQDFLSLLL*QKHIE 183
RPTSS*RT LHMTKMEATR*LEQKLAQTK**MSTTPSK*ATA HLQDF SLLL*QKHIE
Sbjct: 333 VRPTSS*RTTLHMTKMEATR*LEQKLAQTK**MSTTPSK*ATAGHLQDFWSLLL*QKHIE 154
Query: 182 DKQVI*VARQGHRSSWPAP*GKIRTPSCSL 93
D QVI*VA GHRS PAP*GKIRTPSCSL
Sbjct: 153 DMQVI*VALLGHRSC*PAP*GKIRTPSCSL 64
Score = 205 bits (442), Expect(2) = 7e-068
Identities = 90/121 (74%), Positives = 97/121 (80%)
Frame = +3 / +1
Query: 324 HMQSCSLTAGWSCLGSMVLPMFTTILCGQCL*TAK**TYGIFQEMRS*VNLMMFCQLQRD 503
HMQSCSLTAGWS LGSMVL MFTTILCGQ L*TAK**TYG+FQ MRS*VNLMMFCQLQRD
Sbjct: 295 HMQSCSLTAGWSYLGSMVLLMFTTILCGQRL*TAK**TYGMFQGMRS*VNLMMFCQLQRD 474
Query: 504 ILNKTDQKHXXXXXXXXXXXXXQGTQSG*TWRMERLKIELKPRENRGAKIPSTTKTTDTK 683
IL+K D+KH QGTQSG +WR +RLK EL+ +ENRG KIPSTTK TDTK
Sbjct: 475 ILSKMDRKHLRSSSASLQSLQNQGTQSGRSWRRQRLKTELRLKENRGMKIPSTTKITDTK 654
Query: 684 P 686
P
Sbjct: 655 P 657
Score = 74.4 bits (156), Expect(2) = 7e-068
Identities = 33/48 (68%), Positives = 33/48 (68%)
Frame = +3 / +1
Query: 99 ARWGPDLSSRCWPRTSMSLPGHSYHXXXXXXXXXEQ*RQKIL*MISSG 242
ARWGPDLSSRCW TSMS GHSYH EQ*R KIL*M SSG
Sbjct: 70 ARWGPDLSSRCWLTTSMS*QGHSYHLHILYMLLLEQ*RPKIL*MTSSG 213
Score = 62.0 bits (129), Expect(2) = 6e-091
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = -2 / -1
Query: 686 WFSICSFCRRRDFRPTILSRL*LDFQPLHPP 594
WFSIC+FCRRRDF PTIL + *L FQPL PP
Sbjct: 657 WFSICNFCRRRDFHPTILFQP*LCFQPLPPP 565
Score = 32.7 bits (65), Expect(2) = 1e-092
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / +2
Query: 637 IVGRKSLLRQKLQILN 684
IVG KSLLRQKLQILN
Sbjct: 608 IVG*KSLLRQKLQILN 655
Score = 22.6 bits (43), Expect(2) = e-118
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / +2
Query: 69 SSVLLEEEQRAR 104
SSVLLEEE++ R
Sbjct: 32 SSVLLEEEEQGR 67
>gb|CD431545.1|CD431545 ETH1_9_C03.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_9_C03_A002 5', mRNA sequence
Length = 580
Score = 352 bits (763), Expect(2) = 2e-096
Identities = 140/145 (96%), Positives = 142/145 (97%)
Frame = +2 / +1
Query: 98 SKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITL 277
S+MGSGSFLKVLA NFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITL
Sbjct: 145 SEMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITL 324
Query: 278 FELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQIVNIWYIPRN 457
FELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRP FVNR IVNIWY+PRN
Sbjct: 325 FELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPTFVNRXIVNIWYVPRN 504
Query: 458 EKLGKSDDVLSAAERYIEQNGPEAF 532
EKLGKSDDVLSAAERYIEQNGPEAF
Sbjct: 505 EKLGKSDDVLSAAERYIEQNGPEAF 579
Score = 315 bits (683), Expect = 6e-085
Identities = 136/145 (93%), Positives = 138/145 (95%)
Frame = -1 / -3
Query: 531 NASGPFCSIYLSAADRTSSDLPSFSFLGIYHMFTIWRFTNIGRTKWS*T*AAPLNQGKTN 352
NASGPFCSIYLSAADRTSSDLPSFSFLG YHMFTI RFTN+GRTKWS*T*AAPLNQGKTN
Sbjct: 578 NASGPFCSIYLSAADRTSSDLPSFSFLGTYHMFTIXRFTNVGRTKWS*T*AAPLNQGKTN 399
Query: 351 QQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*SSTGFFVSIALTEAYRG*AS 172
QQLKN+FAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC SSTGF VSIALTEAYRG AS
Sbjct: 398 QQLKNNFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHCWSSTGFLVSIALTEAYRGYAS 219
Query: 171 DMSGPARTSKFLASTLRKDPDPILL 97
DMSGPARTSK LASTLRKDPDPI L
Sbjct: 218 DMSGPARTSKLLASTLRKDPDPISL 144
Score = 309 bits (670), Expect = 4e-083
Identities = 130/145 (89%), Positives = 133/145 (91%)
Frame = -3 / -2
Query: 532 KCFWSVLFNISLCS*QNIIRFT*LLISWNIPYVHYLAVHKHWPHKMVVNIGSTIEPRQDQ 353
KCF S+L NISLCS*QNIIRFT*LLI WNIPYVHY AVHK WPHKMVVNI STIEPR DQ
Sbjct: 579 KCFRSILLNISLCS*QNIIRFT*LLIPWNIPYVHYXAVHKRWPHKMVVNISSTIEPR*DQ 400
Query: 352 PAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPVSEPLLIIYRIFCLYCSNRSI*RISK 173
PAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPVSEPLL+IYRIF LYCSNRSI*RI K
Sbjct: 399 PAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPVSEPLLVIYRIFGLYCSNRSI*RICK 220
Query: 172 *YEWPGKDIEVLGQHLEERSGPHLA 98
*YEWP DIEV+ QHLEERSGPHLA
Sbjct: 219 *YEWPC*DIEVVSQHLEERSGPHLA 145
Score = 286 bits (619), Expect = 4e-076
Identities = 122/148 (82%), Positives = 128/148 (86%)
Frame = +1 / +3
Query: 88 RSREQDGVRIFPQGAGQELRCPCRATHITCLSSICFC*SNRDKKSCR*SAVAHLLGVVLI 267
+ RE+DGVRIFPQGAG +LRCP RATHITC+SSICFC*SNRD+KSCR* AVAHLLGVVLI
Sbjct: 135 QGRERDGVRIFPQGAG*QLRCPSRATHITCISSICFC*SNRDQKSCR*PAVAHLLGVVLI 314
Query: 268 YHFV*ANFCSNYRVASILVICKXXXXXXXXXXXXQWCCLCLRPFCAANVCEPPNSEHMVY 447
YHFV*ANFCSNYRVASILVICK QWCCLCLRPFCAANVCEPPNSEHMV
Sbjct: 315 YHFV*ANFCSNYRVASILVICKVVL*LLVGLTLVQWCCLCLRPFCAANVCEPPNSEHMVC 494
Query: 448 SKK*EAR*I**CSVSCREIY*TKRTRSI 531
SK+*EAR*I**CSVSCREIY* K T SI
Sbjct: 495 SKE*EAR*I**CSVSCREIY*AKWTGSI 578
Score = 281 bits (609), Expect = 9e-075
Identities = 130/147 (88%), Positives = 132/147 (89%)
Frame = -2 / -1
Query: 533 QMLLVRFVQYISLQLTEHHQIYLASHFLEYTICSLFGGSQTLAAQNGRKHRQHH*TKARP 354
QML V F QYISLQLTEHHQIYLASH LE+TICSL GGSQTLAAQNGRKH+QHH*TK RP
Sbjct: 580 QMLPVHFAQYISLQLTEHHQIYLASHSLEHTICSLXGGSQTLAAQNGRKHKQHH*TKVRP 401
Query: 353 TSS*RTALHMTKMEATR*LEQKLAQTK**MSTTPSK*ATADHLQDFLSLLL*QKHIEDKQ 174
TSS*RT LHMTKMEATR*LEQKLAQTK**MSTTPSK*ATA HLQDF SLLL*QKHIED Q
Sbjct: 400 TSS*RTTLHMTKMEATR*LEQKLAQTK**MSTTPSK*ATAGHLQDFWSLLL*QKHIEDMQ 221
Query: 173 VI*VARQGHRSSWPAP*GKIRTPSCSL 93
VI*VA GHRS PAP*GKIRTPS SL
Sbjct: 220 VI*VALLGHRSC*PAP*GKIRTPSRSL 140
Score = 136 bits (292), Expect(2) = 3e-047
Identities = 60/69 (86%), Positives = 63/69 (91%)
Frame = +3 / +2
Query: 324 HMQSCSLTAGWSCLGSMVLPMFTTILCGQCL*TAK**TYGIFQEMRS*VNLMMFCQLQRD 503
HMQSCSLTAGWS LGSMVL MFTTILCGQ L*TA **TYG+FQ MRS*VNLMMFCQLQRD
Sbjct: 371 HMQSCSLTAGWSYLGSMVLLMFTTILCGQRL*TAX**TYGMFQGMRS*VNLMMFCQLQRD 550
Query: 504 ILNKTDQKH 530
IL+K D+KH
Sbjct: 551 ILSKMDRKH 577
Score = 74.4 bits (156), Expect(2) = 3e-047
Identities = 33/48 (68%), Positives = 33/48 (68%)
Frame = +3 / +2
Query: 99 ARWGPDLSSRCWPRTSMSLPGHSYHXXXXXXXXXEQ*RQKIL*MISSG 242
ARWGPDLSSRCW TSMS GHSYH EQ*R KIL*M SSG
Sbjct: 146 ARWGPDLSSRCWLTTSMS*QGHSYHLHILYMLLLEQ*RPKIL*MTSSG 289
Score = 22.6 bits (43), Expect(2) = 2e-096
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 69 SSVLLEEEQRAR 104
SSVLLEEE++ R
Sbjct: 108 SSVLLEEEEQGR 143
>gb|CD226376.1|CD226376 CCC1_45_B08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_45_B08_A007 3', mRNA sequence
Length = 671
Score = 300 bits (649), Expect(5) = 2e-093
Identities = 119/144 (82%), Positives = 122/144 (84%)
Frame = +2 / +1
Query: 260 YSFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQIVNI 439
YSFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRP FVNRQIVNI
Sbjct: 1 YSFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPTFVNRQIVNI 180
Query: 440 WYIPRNEKLGKSDDVLSAAERYIEQNGPEAFEXXXXXXXXXXXXXXXXXXXLEDGEAENR 619
WY+PRNEKLGKSDDVLSAAERYIEQNGPEAFE LE+ EAENR
Sbjct: 181 WYVPRNEKLGKSDDVLSAAERYIEQNGPEAFEKLISKSTKSSKSRNTKRSILEEAEAENR 360
Query: 620 AKAERESWGENPFYDKNYRY*TSS 691
AKAERESW ENPFYDKNYRY*T+S
Sbjct: 361 AKAERESWDENPFYDKNYRY*TTS 432
Score = 272 bits (589), Expect(4) = 2e-083
Identities = 121/143 (84%), Positives = 126/143 (88%)
Frame = -1 / -1
Query: 690 ELV*YL*FLS*KGFSPHDSLSALARFSASPSSKFNRXXXXXXXXXXXXLMSFSNASGPFC 511
++V*YL*FLS*KGFS HDSLSALA FSAS SSK +R LMSFSNASGPFC
Sbjct: 431 DVV*YL*FLS*KGFSSHDSLSALALFSASASSKIDRFVFLDFEDFVDLLMSFSNASGPFC 252
Query: 510 SIYLSAADRTSSDLPSFSFLGIYHMFTIWRFTNIGRTKWS*T*AAPLNQGKTNQQLKNSF 331
SIYLSAADRTSSDLPSFSFLG YHMFTIWRFTN+GRTKWS*T*AAPLNQGKTNQQLKN+F
Sbjct: 251 SIYLSAADRTSSDLPSFSFLGTYHMFTIWRFTNVGRTKWS*T*AAPLNQGKTNQQLKNNF 72
Query: 330 AYDQNGSHSIIGAKVSSNKVINE 262
AYDQNGSHSIIGAKVSSNKVINE
Sbjct: 71 AYDQNGSHSIIGAKVSSNKVINE 3
Score = 249 bits (538), Expect(2) = 3e-069
Identities = 111/142 (78%), Positives = 114/142 (80%)
Frame = -3 / -3
Query: 685 GLVSVVFVVEGIFAPRXXXXXXXXXXXXXLQVQPLCVPXXXXXXXLADELLKCFWSVLFN 506
GLVSV+FVVEGIF PR LQ +PLCVP LADELLKCF S+L N
Sbjct: 426 GLVSVIFVVEGIFIPRFSFSLSSVFSLCLLQDRPLCVP*F*RLCRLADELLKCFRSILLN 247
Query: 505 ISLCS*QNIIRFT*LLISWNIPYVHYLAVHKHWPHKMVVNIGSTIEPRQDQPAVKEQLCI 326
ISLCS*QNIIRFT*LLI WNIPYVHYLAVHK WPHKMVVNI STIEPR DQPAVKEQLCI
Sbjct: 246 ISLCS*QNIIRFT*LLIPWNIPYVHYLAVHKRWPHKMVVNISSTIEPR*DQPAVKEQLCI 67
Query: 325 *PKWKPLDNWSKS*LKQSDK*V 260
*PKWKPLDNWSKS*LKQSDK*V
Sbjct: 66 *PKWKPLDNWSKS*LKQSDK*V 1
Score = 209 bits (451), Expect(4) = 9e-064
Identities = 90/111 (81%), Positives = 95/111 (85%)
Frame = +1 / +3
Query: 262 LIYHFV*ANFCSNYRVASILVICKXXXXXXXXXXXXQWCCLCLRPFCAANVCEPPNSEHM 441
LIYHFV*ANFCSNYRVASILVICK QWCCLCLRPFCAANVCEPPNSEHM
Sbjct: 3 LIYHFV*ANFCSNYRVASILVICKVVL*LLVGLTLVQWCCLCLRPFCAANVCEPPNSEHM 182
Query: 442 VYSKK*EAR*I**CSVSCREIY*TKRTRSI*EAHQQVYEVFEVKEHKAVEL 594
V SK+*EAR*I**CSVSCREIY* K T SI*EAHQQVY+VF++KEHKAV+L
Sbjct: 183 VCSKE*EAR*I**CSVSCREIY*AKWTGSI*EAHQQVYKVFKIKEHKAVDL 335
Score = 205 bits (442), Expect(3) = 1e-054
Identities = 90/121 (74%), Positives = 97/121 (80%)
Frame = +3 / +2
Query: 324 HMQSCSLTAGWSCLGSMVLPMFTTILCGQCL*TAK**TYGIFQEMRS*VNLMMFCQLQRD 503
HMQSCSLTAGWS LGSMVL MFTTILCGQ L*TAK**TYG+FQ MRS*VNLMMFCQLQRD
Sbjct: 65 HMQSCSLTAGWSYLGSMVLLMFTTILCGQRL*TAK**TYGMFQGMRS*VNLMMFCQLQRD 244
Query: 504 ILNKTDQKHXXXXXXXXXXXXXQGTQSG*TWRMERLKIELKPRENRGAKIPSTTKTTDTK 683
IL+K D+KH QGTQSG +WR +RLK EL+ +ENRG KIPSTTK TDTK
Sbjct: 245 ILSKMDRKHLRSSSASLQSLQNQGTQSGRSWRRQRLKTELRLKENRGMKIPSTTKITDTK 424
Query: 684 P 686
P
Sbjct: 425 P 427
Score = 192 bits (414), Expect(3) = 1e-064
Identities = 86/94 (91%), Positives = 88/94 (93%)
Frame = -2 / -2
Query: 542 *ASQMLLVRFVQYISLQLTEHHQIYLASHFLEYTICSLFGGSQTLAAQNGRKHRQHH*TK 363
*ASQML V F QYISLQLTEHHQIYLASH LE+TICSLFGGSQTLAAQNGRKH+QHH*TK
Sbjct: 283 *ASQMLPVHFAQYISLQLTEHHQIYLASHSLEHTICSLFGGSQTLAAQNGRKHKQHH*TK 104
Query: 362 ARPTSS*RTALHMTKMEATR*LEQKLAQTK**MS 261
RPTSS*RT LHMTKMEATR*LEQKLAQTK**MS
Sbjct: 103 VRPTSS*RTTLHMTKMEATR*LEQKLAQTK**MS 2
Score = 62.0 bits (129), Expect(3) = 1e-064
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = -2 / -2
Query: 686 WFSICSFCRRRDFRPTILSRL*LDFQPLHPP 594
WFSIC+FCRRRDF PTIL + *L FQPL PP
Sbjct: 427 WFSICNFCRRRDFHPTILFQP*LCFQPLPPP 335
Score = 43.2 bits (88), Expect(4) = 2e-083
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = -1 / -3
Query: 828 HYVVAVDVTRYNIQSQKYGNVVFGPTQLKLA*GS*ARS 715
H +VAVDVTRY+ +S+ + + + T+LKLA GS*ARS
Sbjct: 564 HCLVAVDVTRYSTESEIWESRLQSVTRLKLAWGS*ARS 451
Score = 36.8 bits (74), Expect(4) = 9e-064
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1 / +1
Query: 718 PCSRASCKL*LRRTEDDIPIFLTLNIVPCYIHCY 819
PC A C+L* R + L+ VPCYIHCY
Sbjct: 454 PCL*APCEL*PRHRLKTTFPYF*LSTVPCYIHCY 555
Score = 35.0 bits (70), Expect(5) = 2e-093
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3 / +3
Query: 738 QALVAXXXXXXXXXXXXEYCTLLHPLLLHND 830
+AL A +YCTLLHPLLL+N+
Sbjct: 474 RALAASQTEDDFPIFLTQYCTLLHPLLLNNE 566
Score = 35.0 bits (70), Expect(2) = 3e-069
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = -2 / -1
Query: 830 IIM**QWM*QGTIFRVRNMGMSSSVRRN*SLHEAREQG 717
+I+**QWM*QGT+ + + S+ R *S H A +QG
Sbjct: 566 LIV**QWM*QGTVLSQKYGKVVFSL*RG*SSHGAHKQG 453
Score = 33.1 bits (66), Expect(3) = 1e-064
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / -2
Query: 811 GCNKVQYSESEIWECRLRSDATKACMRLVSKV 716
GCNKVQY + + DA KA M L+SKV
Sbjct: 547 GCNKVQY*VRNMGKSSSVCDAAKARMGLISKV 452
Score = 32.7 bits (65), Expect(5) = 2e-093
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3 / +1
Query: 855 CKWR*MLALIVYVLF 899
CKWR*+LA+I+YV F
Sbjct: 586 CKWR*LLAMIIYVSF 630
Score = 32.7 bits (65), Expect(4) = 9e-064
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / +3
Query: 637 IVGRKSLLRQKLQILN 684
IVG KSLLRQKLQILN
Sbjct: 378 IVG*KSLLRQKLQILN 425
Score = 29.0 bits (57), Expect(5) = 2e-093
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2 / +2
Query: 683 TSSKSTQQFEDDLAHEPHASFSCV 754
T + + DLA+EPHASFS V
Sbjct: 419 TKPRPLGSLKTDLAYEPHASFSRV 490
Score = 28.1 bits (55), Expect(4) = 2e-083
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2 / -3
Query: 902 SKKHIND*R*HLPPFT 855
+K HIN+ R* LPPFT
Sbjct: 633 TKAHINNHR*QLPPFT 586
Score = 25.4 bits (49), Expect(3) = 1e-054
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 754 RTEDDIPIFLT 786
+TEDD PIFLT
Sbjct: 492 QTEDDFPIFLT 524
Score = 25.4 bits (49), Expect(4) = 2e-083
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 858 YTVHNCSRTH 829
+TVHNCS TH
Sbjct: 591 FTVHNCSITH 562
Score = 24.4 bits (47), Expect(5) = 2e-093
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3 / +3
Query: 816 LLHNDEF*SNCGL 854
LL N+E *SNCGL
Sbjct: 549 LLLNNEL*SNCGL 587
Score = 24.0 bits (46), Expect(4) = 9e-064
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +1 / +2
Query: 856 VNGGRC*R*SFM 891
VNGG C*R* FM
Sbjct: 587 VNGGSC*R*LFM 622
Score = 23.5 bits (45), Expect(3) = 1e-054
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2 / +2
Query: 791 ILYLVTSTAT 820
+LYLVTSTAT
Sbjct: 527 VLYLVTSTAT 556
>gb|AW678479.1|AW678479 WS1_16_E03.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 451
Score = 319 bits (691), Expect = 4e-086
Identities = 125/127 (98%), Positives = 126/127 (99%)
Frame = +2 / +2
Query: 155 AGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYAK 334
AGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYAK
Sbjct: 8 AGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYAK 187
Query: 335 LFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQIVNIWYIPRNEKLGKSDDVLSAAERYIEQ 514
LFFNCWLVLPWFNGAAYVYDHFVRP FVNRQIVNIWY+PRNEKLGKSDDVLSAAERYIEQ
Sbjct: 188 LFFNCWLVLPWFNGAAYVYDHFVRPTFVNRQIVNIWYVPRNEKLGKSDDVLSAAERYIEQ 367
Query: 515 NGPEAFE 535
NGPEAFE
Sbjct: 368 NGPEAFE 388
Score = 295 bits (639), Expect = 7e-079
Identities = 127/146 (86%), Positives = 130/146 (89%)
Frame = -3 / -1
Query: 595 QVQPLCVPXXXXXXXLADELLKCFWSVLFNISLCS*QNIIRFT*LLISWNIPYVHYLAVH 416
Q +PLCVP LADELLKCF S+L NISLCS*QNIIRFT*LLI WNIPYVHYLAVH
Sbjct: 448 QDRPLCVP*F*RLCRLADELLKCFRSILLNISLCS*QNIIRFT*LLIPWNIPYVHYLAVH 269
Query: 415 KHWPHKMVVNIGSTIEPRQDQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPVSEPL 236
K WPHKMVVNI STIEPR DQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPVSEPL
Sbjct: 268 KRWPHKMVVNISSTIEPR*DQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPVSEPL 89
Query: 235 LIIYRIFCLYCSNRSI*RISK*YEWP 158
L+IYRIF LYCSNRSI*RI K*YEWP
Sbjct: 88 LVIYRIFGLYCSNRSI*RICK*YEWP 11
Score = 293 bits (635), Expect = 2e-078
Identities = 128/148 (86%), Positives = 131/148 (88%)
Frame = -1 / -2
Query: 597 SKFNRXXXXXXXXXXXXLMSFSNASGPFCSIYLSAADRTSSDLPSFSFLGIYHMFTIWRF 418
SK +R LMSFSNASGPFCSIYLSAADRTSSDLPSFSFLG YHMFTIWRF
Sbjct: 450 SKIDRFVFLDFEDFVDLLMSFSNASGPFCSIYLSAADRTSSDLPSFSFLGTYHMFTIWRF 271
Query: 417 TNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSH 238
TN+GRTKWS*T*AAPLNQGKTNQQLKN+FAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSH
Sbjct: 270 TNVGRTKWS*T*AAPLNQGKTNQQLKNNFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSH 91
Query: 237 C*SSTGFFVSIALTEAYRG*ASDMSGPA 154
C SSTGF VSIALTEAYRG ASDMSGPA
Sbjct: 90 CWSSTGFLVSIALTEAYRGYASDMSGPA 7
Score = 285 bits (617), Expect = 7e-076
Identities = 122/146 (83%), Positives = 129/146 (88%)
Frame = +1 / +1
Query: 157 RATHITCLSSICFC*SNRDKKSCR*SAVAHLLGVVLIYHFV*ANFCSNYRVASILVICKX 336
RATHITC+SSICFC*SNRD+KSCR* AVAHLLGVVLIYHFV*ANFCSNYRVASILVICK
Sbjct: 10 RATHITCISSICFC*SNRDQKSCR*PAVAHLLGVVLIYHFV*ANFCSNYRVASILVICKV 189
Query: 337 XXXXXXXXXXXQWCCLCLRPFCAANVCEPPNSEHMVYSKK*EAR*I**CSVSCREIY*TK 516
QWCCLCLRPFCAANVCEPPNSEHMV SK+*EAR*I**CSVSCREIY* K
Sbjct: 190 VL*LLVGLTLVQWCCLCLRPFCAANVCEPPNSEHMVCSKE*EAR*I**CSVSCREIY*AK 369
Query: 517 RTRSI*EAHQQVYEVFEVKEHKAVEL 594
T SI*EAHQQVY+VF++KEHKAV+L
Sbjct: 370 WTGSI*EAHQQVYKVFKIKEHKAVDL 447
Score = 255 bits (551), Expect = 9e-067
Identities = 117/128 (91%), Positives = 119/128 (92%)
Frame = -2 / -3
Query: 542 *ASQMLLVRFVQYISLQLTEHHQIYLASHFLEYTICSLFGGSQTLAAQNGRKHRQHH*TK 363
*ASQML V F QYISLQLTEHHQIYLASH LE+TICSLFGGSQTLAAQNGRKH+QHH*TK
Sbjct: 395 *ASQMLPVHFAQYISLQLTEHHQIYLASHSLEHTICSLFGGSQTLAAQNGRKHKQHH*TK 216
Query: 362 ARPTSS*RTALHMTKMEATR*LEQKLAQTK**MSTTPSK*ATADHLQDFLSLLL*QKHIE 183
RPTSS*RT LHMTKMEATR*LEQKLAQTK**MSTTPSK*ATA HLQDF SLLL*QKHIE
Sbjct: 215 VRPTSS*RTTLHMTKMEATR*LEQKLAQTK**MSTTPSK*ATAGHLQDFWSLLL*QKHIE 36
Query: 182 DKQVI*VA 159
D QVI*VA
Sbjct: 35 DMQVI*VA 12
Score = 154 bits (330), Expect(2) = 7e-041
Identities = 68/91 (74%), Positives = 72/91 (79%)
Frame = +3 / +3
Query: 324 HMQSCSLTAGWSCLGSMVLPMFTTILCGQCL*TAK**TYGIFQEMRS*VNLMMFCQLQRD 503
HMQSCSLTAGWS LGSMVL MFTTILCGQ L*TAK**TYG+FQ MRS*VNLMMFCQLQRD
Sbjct: 177 HMQSCSLTAGWSYLGSMVLLMFTTILCGQRL*TAK**TYGMFQGMRS*VNLMMFCQLQRD 356
Query: 504 ILNKTDQKHXXXXXXXXXXXXXQGTQSG*TW 596
IL+K D+KH QGTQSG +W
Sbjct: 357 ILSKMDRKHLRSSSASLQSLQNQGTQSGRSW 449
Score = 35.4 bits (71), Expect(2) = 7e-041
Identities = 17/28 (60%), Positives = 17/28 (60%)
Frame = +3 / +3
Query: 159 GHSYHXXXXXXXXXEQ*RQKIL*MISSG 242
GHSYH EQ*R KIL*M SSG
Sbjct: 12 GHSYHLHILYMLLLEQ*RPKIL*MTSSG 95
>gb|CW165736.1|CW165736 104_574_11152669_148_36480_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11152669, DNA
sequence
Length = 690
Score = 192 bits (413), Expect(2) = 3e-073
Identities = 73/75 (97%), Positives = 74/75 (98%)
Frame = +2 / +3
Query: 311 LPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQIVNIWYIPRNEKLGKSDDVLS 490
LPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRP FVNRQIVNIWY+PRNEKLGKSDDVLS
Sbjct: 360 LPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPTFVNRQIVNIWYVPRNEKLGKSDDVLS 539
Query: 491 AAERYIEQNGPEAFE 535
AAERYIEQNGPEAFE
Sbjct: 540 AAERYIEQNGPEAFE 584
Score = 185 bits (398), Expect(2) = 6e-067
Identities = 75/78 (96%), Positives = 77/78 (98%)
Frame = -1 / -3
Query: 543 MSFSNASGPFCSIYLSAADRTSSDLPSFSFLGIYHMFTIWRFTNIGRTKWS*T*AAPLNQ 364
MSFSNASGPFCSIYLSAADRTSSDLPSFSFLG YHMFTIWRFTN+GRTKWS*T*AAPLNQ
Sbjct: 592 MSFSNASGPFCSIYLSAADRTSSDLPSFSFLGTYHMFTIWRFTNVGRTKWS*T*AAPLNQ 413
Query: 363 GKTNQQLKNSFAYDQNGS 310
GKTNQQLKN+FAYDQNGS
Sbjct: 412 GKTNQQLKNNFAYDQNGS 359
Score = 178 bits (383), Expect(2) = 2e-063
Identities = 73/80 (91%), Positives = 74/80 (92%)
Frame = -3 / -2
Query: 547 ADELLKCFWSVLFNISLCS*QNIIRFT*LLISWNIPYVHYLAVHKHWPHKMVVNIGSTIE 368
ADELLKCF S+L NISLCS*QNIIRFT*LLI WNIPYVHYLAVHK WPHKMVVNI STIE
Sbjct: 596 ADELLKCFRSILLNISLCS*QNIIRFT*LLIPWNIPYVHYLAVHKRWPHKMVVNISSTIE 417
Query: 367 PRQDQPAVKEQLCI*PKWKP 308
PR DQPAVKEQLCI*PKWKP
Sbjct: 416 PR*DQPAVKEQLCI*PKWKP 357
Score = 163 bits (351), Expect(2) = 2e-056
Identities = 70/80 (87%), Positives = 73/80 (91%)
Frame = -2 / -1
Query: 542 *ASQMLLVRFVQYISLQLTEHHQIYLASHFLEYTICSLFGGSQTLAAQNGRKHRQHH*TK 363
*ASQML V F QYISLQLTEHHQIYLASH LE+TICSLFGGSQTLAAQNGRKH+QHH*TK
Sbjct: 591 *ASQMLPVHFAQYISLQLTEHHQIYLASHSLEHTICSLFGGSQTLAAQNGRKHKQHH*TK 412
Query: 362 ARPTSS*RTALHMTKMEATR 303
RPTSS*RT LHMTKMEA +
Sbjct: 411 VRPTSS*RTTLHMTKMEACK 352
Score = 141 bits (303), Expect(2) = 2e-054
Identities = 63/80 (78%), Positives = 64/80 (80%)
Frame = +1 / +2
Query: 310 ASILVICKXXXXXXXXXXXXQWCCLCLRPFCAANVCEPPNSEHMVYSKK*EAR*I**CSV 489
ASILVICK QWCCLCLRPFCAANVCEPPNSEHMV SK+*EAR*I**CSV
Sbjct: 359 ASILVICKVVL*LLVGLTLVQWCCLCLRPFCAANVCEPPNSEHMVCSKE*EAR*I**CSV 538
Query: 490 SCREIY*TKRTRSI*EAHQQ 549
SCREIY* K T SI*EAHQQ
Sbjct: 539 SCREIY*AKWTGSI*EAHQQ 598
Score = 139 bits (298), Expect(2) = 2e-032
Identities = 61/69 (88%), Positives = 64/69 (92%)
Frame = +3 / +1
Query: 324 HMQSCSLTAGWSCLGSMVLPMFTTILCGQCL*TAK**TYGIFQEMRS*VNLMMFCQLQRD 503
HMQSCSLTAGWS LGSMVL MFTTILCGQ L*TAK**TYG+FQ MRS*VNLMMFCQLQRD
Sbjct: 373 HMQSCSLTAGWSYLGSMVLLMFTTILCGQRL*TAK**TYGMFQGMRS*VNLMMFCQLQRD 552
Query: 504 ILNKTDQKH 530
IL+K D+KH
Sbjct: 553 ILSKMDRKH 579
Score = 108 bits (230), Expect(2) = 3e-073
Identities = 45/66 (68%), Positives = 52/66 (78%)
Frame = +2 / +3
Query: 113 GSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTF 292
G FL +L +++ ++ + YASVRAIETKNPVDDQQWLTYWVLYSFITLFELTF
Sbjct: 30 GFFL*MLCEHYCYISNHFLFWHICRYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTF 209
Query: 293 APIIEW 310
APIIEW
Sbjct: 210 APIIEW 227
Score = 95.5 bits (202), Expect(2) = 2e-054
Identities = 39/43 (90%), Positives = 41/43 (95%)
Frame = +1 / +2
Query: 187 ICFC*SNRDKKSCR*SAVAHLLGVVLIYHFV*ANFCSNYRVAS 315
ICFC*SNRD+KSCR* AVAHLLGVVLIYHFV*ANFCSNYRV +
Sbjct: 104 ICFC*SNRDQKSCR*PAVAHLLGVVLIYHFV*ANFCSNYRVVN 232
Score = 94.1 bits (199), Expect(2) = 6e-067
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = -3 / -2
Query: 310 PLDNWSKS*LKQSDK*VQHPVSEPLLIIYRIFCLYCSNRSI 188
PLDNWSKS*LKQSDK*VQHPVSEPLL+IYRIF LYCSNRSI
Sbjct: 227 PLDNWSKS*LKQSDK*VQHPVSEPLLVIYRIFGLYCSNRSI 105
Score = 89.0 bits (188), Expect(2) = 2e-063
Identities = 39/41 (95%), Positives = 39/41 (95%)
Frame = -1 / -3
Query: 309 HSIIGAKVSSNKVINEYNTQ*VSHC*SSTGFFVSIALTEAY 187
HSIIGAKVSSNKVINEYNTQ*VSHC SSTGF VSIALTEAY
Sbjct: 226 HSIIGAKVSSNKVINEYNTQ*VSHCWSSTGFLVSIALTEAY 104
Score = 80.3 bits (169), Expect(2) = 2e-056
Identities = 39/41 (95%), Positives = 39/41 (95%)
Frame = -2 / -1
Query: 308 TR*LEQKLAQTK**MSTTPSK*ATADHLQDFLSLLL*QKHI 186
TR*LEQKLAQTK**MSTTPSK*ATA HLQDF SLLL*QKHI
Sbjct: 225 TR*LEQKLAQTK**MSTTPSK*ATAGHLQDFWSLLL*QKHI 103
Score = 24.4 bits (47), Expect(2) = 2e-032
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3 / +1
Query: 201 EQ*RQKIL*MISSG 242
EQ*R KIL*M SSG
Sbjct: 118 EQ*RPKIL*MTSSG 159
>gb|BM324869.1|BM324869 PIC1_36_H02.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 456
Score = 269 bits (581), Expect = 7e-071
Identities = 107/116 (92%), Positives = 109/116 (93%)
Frame = +2 / +1
Query: 98 SKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITL 277
SKMGSGSFLKVLA NFDVLA PLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITL
Sbjct: 109 SKMGSGSFLKVLANNFDVLARPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITL 288
Query: 278 FELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQIVNIWY 445
FELTFAPIIEWLPFW+YAKLFFNCWL LPW NGAAYVY+HFVRP FVNRQI NI Y
Sbjct: 289 FELTFAPIIEWLPFWTYAKLFFNCWLALPWINGAAYVYEHFVRPTFVNRQIENISY 456
Score = 237 bits (513), Expect = 2e-061
Identities = 100/116 (86%), Positives = 104/116 (89%)
Frame = -3 / -1
Query: 445 IPYVHYLAVHKHWPHKMVVNIGSTIEPRQDQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK 266
I YV YLAVHK WPHKM+VNI STI+PR QPAVKEQLCI PKWKPLDNWSKS*LKQSDK
Sbjct: 456 IRYVLYLAVHKRWPHKMLVNISSTIDPR*GQPAVKEQLCICPKWKPLDNWSKS*LKQSDK 277
Query: 265 *VQHPVSEPLLIIYRIFCLYCSNRSI*RISK*YEWPGKDIEVLGQHLEERSGPHLA 98
*VQHPVSEPLL+IYRIF LYCSNRSI*RI K*YEWP DIEV+ QHLEERSGPHLA
Sbjct: 276 *VQHPVSEPLLVIYRIFGLYCSNRSI*RICK*YEWPC*DIEVVSQHLEERSGPHLA 109
Score = 232 bits (501), Expect = 7e-060
Identities = 103/116 (88%), Positives = 106/116 (91%)
Frame = -1 / -2
Query: 444 YHMFTIWRFTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVIN 265
Y MF+IWRFTN+GRTK S*T*AAPL QGK NQQLKN+FAY QNGSHSIIGAKVSSNKVIN
Sbjct: 455 YDMFSIWRFTNVGRTKCS*T*AAPLIQGKANQQLKNNFAYVQNGSHSIIGAKVSSNKVIN 276
Query: 264 EYNTQ*VSHC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILL 97
EYNTQ*VSHC SSTGF VSIALTEAYRG ASDMSG ARTSK LASTLRKDPDPILL
Sbjct: 275 EYNTQ*VSHCWSSTGFLVSIALTEAYRGYASDMSGRARTSKLLASTLRKDPDPILL 108
Score = 231 bits (498), Expect = 2e-059
Identities = 94/119 (78%), Positives = 99/119 (83%)
Frame = +1 / +3
Query: 88 RSREQDGVRIFPQGAGQELRCPCRATHITCLSSICFC*SNRDKKSCR*SAVAHLLGVVLI 267
+ REQDGVRIFPQGAG +LRCP ATHITC+SSICFC*SNRD+KSCR* AVAHLLGVVLI
Sbjct: 99 QGREQDGVRIFPQGAG*QLRCPSTATHITCISSICFC*SNRDQKSCR*PAVAHLLGVVLI 278
Query: 268 YHFV*ANFCSNYRVASILVICKXXXXXXXXXXXXQWCCLCLRPFCAANVCEPPNSEHMV 444
YHFV*ANFCSNYRVASIL ICK QWCCLCLR FCAANVCEPPN EH+V
Sbjct: 279 YHFV*ANFCSNYRVASILDICKVVL*LLVGLTLDQWCCLCLRAFCAANVCEPPNREHIV 455
Score = 226 bits (488), Expect = 4e-058
Identities = 104/117 (88%), Positives = 107/117 (91%)
Frame = -2 / -3
Query: 443 TICSLFGGSQTLAAQNGRKHRQHH*TKARPTSS*RTALHMTKMEATR*LEQKLAQTK**M 264
TICSLFGGSQTLAAQN RKH+QHH*+K RPTSS*RT LHM+KMEATR*LEQKLAQTK**M
Sbjct: 454 TICSLFGGSQTLAAQNARKHKQHH*SKVRPTSS*RTTLHMSKMEATR*LEQKLAQTK**M 275
Query: 263 STTPSK*ATADHLQDFLSLLL*QKHIEDKQVI*VARQGHRSSWPAP*GKIRTPSCSL 93
STTPSK*ATA HLQDF SLLL*QKHIED QVI*VA GHRS PAP*GKIRTPSCSL
Sbjct: 274 STTPSK*ATAGHLQDFWSLLL*QKHIEDMQVI*VAVLGHRSC*PAP*GKIRTPSCSL 104
Score = 74.4 bits (156), Expect(3) = 6e-029
Identities = 33/39 (84%), Positives = 34/39 (87%)
Frame = +3 / +2
Query: 324 HMQSCSLTAGWSCLGSMVLPMFTTILCGQCL*TAK**TY 440
HMQSCSLTAGW LGSMVL MFT+ILCGQ L*TAK* TY
Sbjct: 335 HMQSCSLTAGWPYLGSMVLLMFTSILCGQRL*TAK*RTY 451
Score = 73.9 bits (155), Expect(3) = 6e-029
Identities = 33/48 (68%), Positives = 33/48 (68%)
Frame = +3 / +2
Query: 99 ARWGPDLSSRCWPRTSMSLPGHSYHXXXXXXXXXEQ*RQKIL*MISSG 242
ARWGPDLSSRCW TSMS GHSYH EQ*R KIL*M SSG
Sbjct: 110 ARWGPDLSSRCWLTTSMS*HGHSYHLHILYMLLLEQ*RPKIL*MTSSG 253
Score = 21.7 bits (41), Expect(3) = 6e-029
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 70 VLFYWRRSREQ 102
VLFYWR++ +
Sbjct: 73 VLFYWRKNSRE 105
>gb|CD431488.1|CD431488 ETH1_9_C03.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_9_C03_A002 3', mRNA sequence
Length = 560
Score = 208 bits (449), Expect(5) = 2e-066
Identities = 84/109 (77%), Positives = 87/109 (79%)
Frame = +2 / +1
Query: 365 WFNGAAYVYDHFVRPMFVNRQIVNIWYIPRNEKLGKSDDVLSAAERYIEQNGPEAFEXXX 544
WFNGAAYVYDHFVRP FVNRQIVNIWY+PRNEKLGKSDDVLSAAERYIEQNGPEAFE
Sbjct: 1 WFNGAAYVYDHFVRPTFVNRQIVNIWYVPRNEKLGKSDDVLSAAERYIEQNGPEAFEKLI 180
Query: 545 XXXXXXXXXXXXXXXXLEDGEAENRAKAERESWGENPFYDKNYRY*TSS 691
LE+ EAENRAKAERESW ENPFYDKNYRY*T+S
Sbjct: 181 SKSTKSSKSRNTKRSILEEAEAENRAKAERESWDENPFYDKNYRY*TTS 327
Score = 193 bits (415), Expect(4) = 8e-060
Identities = 87/108 (80%), Positives = 91/108 (84%)
Frame = -1 / -1
Query: 690 ELV*YL*FLS*KGFSPHDSLSALARFSASPSSKFNRXXXXXXXXXXXXLMSFSNASGPFC 511
++V*YL*FLS*KGFS HDSLSALA FSAS SSK +R LMSFSNASGPFC
Sbjct: 326 DVV*YL*FLS*KGFSSHDSLSALALFSASASSKIDRFVFLDFEDFVDLLMSFSNASGPFC 147
Query: 510 SIYLSAADRTSSDLPSFSFLGIYHMFTIWRFTNIGRTKWS*T*AAPLN 367
SIYLSAADRTSSDLPSFSFLG YHMFTIWRFTN+GRTKWS*T*AAPLN
Sbjct: 146 SIYLSAADRTSSDLPSFSFLGTYHMFTIWRFTNVGRTKWS*T*AAPLN 3
Score = 172 bits (371), Expect(4) = 1e-048
Identities = 77/107 (71%), Positives = 84/107 (78%)
Frame = +3 / +2
Query: 366 GSMVLPMFTTILCGQCL*TAK**TYGIFQEMRS*VNLMMFCQLQRDILNKTDQKHXXXXX 545
GSMVL MFTTILCGQ L*TAK**TYG+FQ MRS*VNLMMFCQLQRDIL+K D+KH
Sbjct: 2 GSMVLLMFTTILCGQRL*TAK**TYGMFQGMRS*VNLMMFCQLQRDILSKMDRKHLRSSS 181
Query: 546 XXXXXXXXQGTQSG*TWRMERLKIELKPRENRGAKIPSTTKTTDTKP 686
QGTQSG +WR +RLK EL+ +ENRG KIPSTTK TDTKP
Sbjct: 182 ASLQSLQNQGTQSGRSWRRQRLKTELRLKENRGMKIPSTTKITDTKP 322
Score = 171 bits (368), Expect(2) = 6e-046
Identities = 77/107 (71%), Positives = 80/107 (74%)
Frame = -3 / -3
Query: 685 GLVSVVFVVEGIFAPRXXXXXXXXXXXXXLQVQPLCVPXXXXXXXLADELLKCFWSVLFN 506
GLVSV+FVVEGIF PR LQ +PLCVP LADELLKCF S+L N
Sbjct: 321 GLVSVIFVVEGIFIPRFSFSLSSVFSLCLLQDRPLCVP*F*RLCRLADELLKCFRSILLN 142
Query: 505 ISLCS*QNIIRFT*LLISWNIPYVHYLAVHKHWPHKMVVNIGSTIEP 365
ISLCS*QNIIRFT*LLI WNIPYVHYLAVHK WPHKMVVNI STIEP
Sbjct: 141 ISLCS*QNIIRFT*LLIPWNIPYVHYLAVHKRWPHKMVVNISSTIEP 1
Score = 159 bits (342), Expect(5) = 9e-046
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = +1 / +3
Query: 370 QWCCLCLRPFCAANVCEPPNSEHMVYSKK*EAR*I**CSVSCREIY*TKRTRSI*EAHQQ 549
QWCCLCLRPFCAANVCEPPNSEHMV SK+*EAR*I**CSVSCREIY* K T SI*EAHQQ
Sbjct: 6 QWCCLCLRPFCAANVCEPPNSEHMVCSKE*EAR*I**CSVSCREIY*AKWTGSI*EAHQQ 185
Query: 550 VYEVFEVKEHKAVEL 594
VY+VF++KEHKAV+L
Sbjct: 186 VYKVFKIKEHKAVDL 230
Score = 125 bits (268), Expect(3) = 9e-045
Identities = 53/59 (89%), Positives = 55/59 (93%)
Frame = -2 / -2
Query: 542 *ASQMLLVRFVQYISLQLTEHHQIYLASHFLEYTICSLFGGSQTLAAQNGRKHRQHH*T 366
*ASQML V F QYISLQLTEHHQIYLASH LE+TICSLFGGSQTLAAQNGRKH+QHH*T
Sbjct: 178 *ASQMLPVHFAQYISLQLTEHHQIYLASHSLEHTICSLFGGSQTLAAQNGRKHKQHH*T 2
Score = 62.0 bits (129), Expect(3) = 9e-045
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = -2 / -2
Query: 686 WFSICSFCRRRDFRPTILSRL*LDFQPLHPP 594
WFSIC+FCRRRDF PTIL + *L FQPL PP
Sbjct: 322 WFSICNFCRRRDFHPTILFQP*LCFQPLPPP 230
Score = 43.2 bits (88), Expect(4) = 8e-060
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = -1 / -3
Query: 828 HYVVAVDVTRYNIQSQKYGNVVFGPTQLKLA*GS*ARS 715
H +VAVDVTRY+ +S+ + + + T+LKLA GS*ARS
Sbjct: 459 HCLVAVDVTRYSTESEIWESRLQSVTRLKLAWGS*ARS 346
Score = 36.8 bits (74), Expect(4) = 1e-048
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1 / +1
Query: 718 PCSRASCKL*LRRTEDDIPIFLTLNIVPCYIHCY 819
PC A C+L* R + L+ VPCYIHCY
Sbjct: 349 PCL*APCEL*PRHRLKTTFPYF*LSTVPCYIHCY 450
Score = 35.0 bits (70), Expect(5) = 2e-066
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3 / +3
Query: 738 QALVAXXXXXXXXXXXXEYCTLLHPLLLHND 830
+AL A +YCTLLHPLLL+N+
Sbjct: 369 RALAASQTEDDFPIFLTQYCTLLHPLLLNNE 461
Score = 35.0 bits (70), Expect(2) = 6e-046
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = -2 / -1
Query: 830 IIM**QWM*QGTIFRVRNMGMSSSVRRN*SLHEAREQG 717
+I+**QWM*QGT+ + + S+ R *S H A +QG
Sbjct: 461 LIV**QWM*QGTVLSQKYGKVVFSL*RG*SSHGAHKQG 348
Score = 33.1 bits (66), Expect(3) = 9e-045
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / -2
Query: 811 GCNKVQYSESEIWECRLRSDATKACMRLVSKV 716
GCNKVQY + + DA KA M L+SKV
Sbjct: 442 GCNKVQY*VRNMGKSSSVCDAAKARMGLISKV 347
Score = 32.7 bits (65), Expect(5) = 2e-066
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3 / +1
Query: 855 CKWR*MLALIVYVLF 899
CKWR*+LA+I+YV F
Sbjct: 481 CKWR*LLAMIIYVSF 525
Score = 32.7 bits (65), Expect(5) = 9e-046
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / +3
Query: 637 IVGRKSLLRQKLQILN 684
IVG KSLLRQKLQILN
Sbjct: 273 IVG*KSLLRQKLQILN 320
Score = 29.0 bits (57), Expect(5) = 2e-066
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2 / +2
Query: 683 TSSKSTQQFEDDLAHEPHASFSCV 754
T + + DLA+EPHASFS V
Sbjct: 314 TKPRPLGSLKTDLAYEPHASFSRV 385
Score = 28.1 bits (55), Expect(4) = 8e-060
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2 / -3
Query: 902 SKKHIND*R*HLPPFT 855
+K HIN+ R* LPPFT
Sbjct: 528 TKAHINNHR*QLPPFT 481
Score = 25.4 bits (49), Expect(5) = 9e-046
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 754 RTEDDIPIFLT 786
+TEDD PIFLT
Sbjct: 387 QTEDDFPIFLT 419
Score = 25.4 bits (49), Expect(4) = 8e-060
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 858 YTVHNCSRTH 829
+TVHNCS TH
Sbjct: 486 FTVHNCSITH 457
Score = 24.4 bits (47), Expect(5) = 2e-066
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3 / +3
Query: 816 LLHNDEF*SNCGL 854
LL N+E *SNCGL
Sbjct: 444 LLLNNEL*SNCGL 482
Score = 24.0 bits (46), Expect(4) = 1e-048
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +1 / +2
Query: 856 VNGGRC*R*SFM 891
VNGG C*R* FM
Sbjct: 482 VNGGSC*R*LFM 517
Score = 23.5 bits (45), Expect(5) = 9e-046
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2 / +2
Query: 791 ILYLVTSTAT 820
+LYLVTSTAT
Sbjct: 422 VLYLVTSTAT 451
Score = 21.7 bits (41), Expect(5) = 9e-046
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2 / +2
Query: 830 *VLEQLWTV 856
*V+EQLWTV
Sbjct: 458 *VIEQLWTV 484
Score = 21.7 bits (41), Expect(4) = 1e-048
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / +1
Query: 820 YIMMSSRAIVDC 855
Y MS RAIVDC
Sbjct: 448 Y*TMSYRAIVDC 483
>gb|CN126731.1|CN126731 RHOH1_18_G11.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_18_G11_A002 5', mRNA sequence
Length = 778
Score = 235 bits (508), Expect(2) = 5e-065
Identities = 91/126 (72%), Positives = 105/126 (83%)
Frame = +2 / +3
Query: 104 MGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFE 283
MGSGS LKV+A NFDVLAGPL++LAYPLYASV+AIETK+PVDDQQWLTYWVLY ITLFE
Sbjct: 210 MGSGSLLKVVANNFDVLAGPLVALAYPLYASVKAIETKSPVDDQQWLTYWVLYPLITLFE 389
Query: 284 LTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQIVNIWYIPRNEK 463
TFA II+WLPFW KL F CWLVLP+FNGAAYVY ++VRP F+ Q+VNIWY+P+ +
Sbjct: 390 PTFASIIQWLPFWPSMKLIFICWLVLPYFNGAAYVYQNYVRPAFIKNQMVNIWYVPQKKG 569
Query: 464 LGKSDD 481
L D
Sbjct: 570 LFGKSD 587
Score = 164 bits (352), Expect = 3e-039
Identities = 78/124 (62%), Positives = 87/124 (70%)
Frame = -1 / -1
Query: 456 FLGIYHMFTIWRFTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSN 277
F G Y M TIW F G T + T*AAPL GKT+QQ+K +F Q GSH II A V SN
Sbjct: 562 F*GTYQMLTIWFFMKAGLT*FWYT*AAPLKYGKTSQQIKINFIEGQKGSH*IIDANVGSN 383
Query: 276 KVINEYNTQ*VSHC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILL 97
VIN Y TQ VSHC*SSTG VSIALTEAY+G*AS GPARTSK LA+TL KDP+PI +
Sbjct: 382 NVINGYRTQYVSHC*SSTGDLVSIALTEAYKG*ASATKGPARTSKLLATTLSKDPEPIAV 203
Query: 96 SAPP 85
+ P
Sbjct: 202 AGIP 191
Score = 115 bits (246), Expect = 1e-024
Identities = 59/127 (46%), Positives = 80/127 (62%)
Frame = -3 / -3
Query: 448 NIPYVHYLAVHKHWPHKMVVNIGSTIEPRQDQPAVKEQLCI*PKWKPLDNWSKS*LKQSD 269
+IP V +L +++ H ++V+IG IE RQD+PA K+Q P+ KPL+N K KQ
Sbjct: 554 DIPNVDHLVLYEGRSHIILVHIGCAIEVRQDKPANKDQFHRRPERKPLNN*CKCGFKQCY 375
Query: 268 K*VQHPVSEPLLIIYRIFCLYCSNRSI*RISK*YEWPGKDIEVLGQHLEERSGPHLALCS 89
VQ P+ EPLLII+R F LYC N I RIS+ ++ P KD+EV+G LE+RSG H +
Sbjct: 374 *WVQDPICEPLLIIHRRFGLYCLNGGIQRISQCHQRPCKDVEVVGDDLEQRSGAHRRRRN 195
Query: 88 SSSRTEL 68
S S L
Sbjct: 194 SKSAPPL 174
Score = 104 bits (222), Expect = 2e-021
Identities = 50/118 (42%), Positives = 66/118 (55%)
Frame = +1 / +2
Query: 91 SREQDGVRIFPQGAGQELRCPCRATHITCLSSICFC*SNRDKKSCR*SAVAHLLGVVLIY 270
S + DG+RIF QG Q+LR PCRA T LS +C * NRD+ SC *S +AH+LG V I
Sbjct: 197 SGDGDGLRIFAQGRRQQLRRPCRAFGGTGLSFVCLR*GNRDQISCG*STMAHILGPVPIN 376
Query: 271 HFV*ANFCSNYRVASILVICKXXXXXXXXXXXXQWCCLCLRPFCAANVCEPPNSEHMV 444
+ V* + C NY VAS L + QW LC+ C + + P+ +H+V
Sbjct: 377 NIV*THICINYSVASFLAFYEIDLYLLACLAVLQWRSLCVPKLCETCLHKEPDGQHLV 550
Score = 34.5 bits (69), Expect(2) = 5e-065
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +2 / +3
Query: 467 GKSDDVLSAAERYIEQNGPEAFE 535
GKSDD L+A ++++E+NG +A +
Sbjct: 576 GKSDDFLTALDKFVEENGTDALK 644
>gb|AW678587.1|AW678587 WS1_16_E03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 557
Score = 200 bits (432), Expect(5) = 5e-064
Identities = 82/107 (76%), Positives = 85/107 (79%)
Frame = +2 / +3
Query: 371 NGAAYVYDHFVRPMFVNRQIVNIWYIPRNEKLGKSDDVLSAAERYIEQNGPEAFEXXXXX 550
NGAAYVYDHFVRP FVNRQIVNIWY+PRNEKLGKSDDVLSAAERYIEQNGPEAFE
Sbjct: 3 NGAAYVYDHFVRPTFVNRQIVNIWYVPRNEKLGKSDDVLSAAERYIEQNGPEAFEKLISK 182
Query: 551 XXXXXXXXXXXXXXLEDGEAENRAKAERESWGENPFYDKNYRY*TSS 691
LE+ EAENRAKAERESW ENPFYDKNYRY*T+S
Sbjct: 183 STKSSKSRNTKRSILEEAEAENRAKAERESWDENPFYDKNYRY*TTS 323
Score = 190 bits (409), Expect(4) = 5e-059
Identities = 86/107 (80%), Positives = 90/107 (84%)
Frame = -1 / -2
Query: 690 ELV*YL*FLS*KGFSPHDSLSALARFSASPSSKFNRXXXXXXXXXXXXLMSFSNASGPFC 511
++V*YL*FLS*KGFS HDSLSALA FSAS SSK +R LMSFSNASGPFC
Sbjct: 322 DVV*YL*FLS*KGFSSHDSLSALALFSASASSKIDRFVFLDFEDFVDLLMSFSNASGPFC 143
Query: 510 SIYLSAADRTSSDLPSFSFLGIYHMFTIWRFTNIGRTKWS*T*AAPL 370
SIYLSAADRTSSDLPSFSFLG YHMFTIWRFTN+GRTKWS*T*AAPL
Sbjct: 142 SIYLSAADRTSSDLPSFSFLGTYHMFTIWRFTNVGRTKWS*T*AAPL 2
Score = 170 bits (365), Expect(4) = 3e-044
Identities = 76/106 (71%), Positives = 83/106 (78%)
Frame = +3 / +1
Query: 369 SMVLPMFTTILCGQCL*TAK**TYGIFQEMRS*VNLMMFCQLQRDILNKTDQKHXXXXXX 548
SMVL MFTTILCGQ L*TAK**TYG+FQ MRS*VNLMMFCQLQRDIL+K D+KH
Sbjct: 1 SMVLLMFTTILCGQRL*TAK**TYGMFQGMRS*VNLMMFCQLQRDILSKMDRKHLRSSSA 180
Query: 549 XXXXXXXQGTQSG*TWRMERLKIELKPRENRGAKIPSTTKTTDTKP 686
QGTQSG +WR +RLK EL+ +ENRG KIPSTTK TDTKP
Sbjct: 181 SLQSLQNQGTQSGRSWRRQRLKTELRLKENRGMKIPSTTKITDTKP 318
Score = 166 bits (356), Expect(2) = 3e-044
Identities = 75/105 (71%), Positives = 78/105 (74%)
Frame = -3 / -1
Query: 685 GLVSVVFVVEGIFAPRXXXXXXXXXXXXXLQVQPLCVPXXXXXXXLADELLKCFWSVLFN 506
GLVSV+FVVEGIF PR LQ +PLCVP LADELLKCF S+L N
Sbjct: 317 GLVSVIFVVEGIFIPRFSFSLSSVFSLCLLQDRPLCVP*F*RLCRLADELLKCFRSILLN 138
Query: 505 ISLCS*QNIIRFT*LLISWNIPYVHYLAVHKHWPHKMVVNIGSTI 371
ISLCS*QNIIRFT*LLI WNIPYVHYLAVHK WPHKMVVNI STI
Sbjct: 137 ISLCS*QNIIRFT*LLIPWNIPYVHYLAVHKRWPHKMVVNISSTI 3
Score = 159 bits (342), Expect(5) = 3e-049
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = +1 / +2
Query: 370 QWCCLCLRPFCAANVCEPPNSEHMVYSKK*EAR*I**CSVSCREIY*TKRTRSI*EAHQQ 549
QWCCLCLRPFCAANVCEPPNSEHMV SK+*EAR*I**CSVSCREIY* K T SI*EAHQQ
Sbjct: 2 QWCCLCLRPFCAANVCEPPNSEHMVCSKE*EAR*I**CSVSCREIY*AKWTGSI*EAHQQ 181
Query: 550 VYEVFEVKEHKAVEL 594
VY+VF++KEHKAV+L
Sbjct: 182 VYKVFKIKEHKAVDL 226
Score = 123 bits (263), Expect(3) = 4e-044
Identities = 52/58 (89%), Positives = 54/58 (93%)
Frame = -2 / -3
Query: 542 *ASQMLLVRFVQYISLQLTEHHQIYLASHFLEYTICSLFGGSQTLAAQNGRKHRQHH* 369
*ASQML V F QYISLQLTEHHQIYLASH LE+TICSLFGGSQTLAAQNGRKH+QHH*
Sbjct: 174 *ASQMLPVHFAQYISLQLTEHHQIYLASHSLEHTICSLFGGSQTLAAQNGRKHKQHH* 1
Score = 62.0 bits (129), Expect(3) = 4e-044
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = -2 / -3
Query: 686 WFSICSFCRRRDFRPTILSRL*LDFQPLHPP 594
WFSIC+FCRRRDF PTIL + *L FQPL PP
Sbjct: 318 WFSICNFCRRRDFHPTILFQP*LCFQPLPPP 226
Score = 43.2 bits (88), Expect(4) = 5e-059
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = -1 / -1
Query: 828 HYVVAVDVTRYNIQSQKYGNVVFGPTQLKLA*GS*ARS 715
H +VAVDVTRY+ +S+ + + + T+LKLA GS*ARS
Sbjct: 455 HCLVAVDVTRYSTESEIWESRLQSVTRLKLAWGS*ARS 342
Score = 36.8 bits (74), Expect(5) = 3e-049
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1 / +3
Query: 718 PCSRASCKL*LRRTEDDIPIFLTLNIVPCYIHCY 819
PC A C+L* R + L+ VPCYIHCY
Sbjct: 345 PCL*APCEL*PRHRLKTTFPYF*LSTVPCYIHCY 446
Score = 35.0 bits (70), Expect(5) = 5e-064
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3 / +2
Query: 738 QALVAXXXXXXXXXXXXEYCTLLHPLLLHND 830
+AL A +YCTLLHPLLL+N+
Sbjct: 365 RALAASQTEDDFPIFLTQYCTLLHPLLLNNE 457
Score = 35.0 bits (70), Expect(2) = 3e-044
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = -2 / -2
Query: 830 IIM**QWM*QGTIFRVRNMGMSSSVRRN*SLHEAREQG 717
+I+**QWM*QGT+ + + S+ R *S H A +QG
Sbjct: 457 LIV**QWM*QGTVLSQKYGKVVFSL*RG*SSHGAHKQG 344
Score = 33.1 bits (66), Expect(3) = 4e-044
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / -3
Query: 811 GCNKVQYSESEIWECRLRSDATKACMRLVSKV 716
GCNKVQY + + DA KA M L+SKV
Sbjct: 438 GCNKVQY*VRNMGKSSSVCDAAKARMGLISKV 343
Score = 32.7 bits (65), Expect(5) = 5e-064
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3 / +3
Query: 855 CKWR*MLALIVYVLF 899
CKWR*+LA+I+YV F
Sbjct: 477 CKWR*LLAMIIYVSF 521
Score = 32.7 bits (65), Expect(5) = 3e-049
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / +2
Query: 637 IVGRKSLLRQKLQILN 684
IVG KSLLRQKLQILN
Sbjct: 269 IVG*KSLLRQKLQILN 316
Score = 29.0 bits (57), Expect(5) = 5e-064
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2 / +1
Query: 683 TSSKSTQQFEDDLAHEPHASFSCV 754
T + + DLA+EPHASFS V
Sbjct: 310 TKPRPLGSLKTDLAYEPHASFSRV 381
Score = 28.1 bits (55), Expect(4) = 5e-059
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2 / -1
Query: 902 SKKHIND*R*HLPPFT 855
+K HIN+ R* LPPFT
Sbjct: 524 TKAHINNHR*QLPPFT 477
Score = 25.4 bits (49), Expect(4) = 3e-044
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 754 RTEDDIPIFLT 786
+TEDD PIFLT
Sbjct: 383 QTEDDFPIFLT 415
Score = 25.4 bits (49), Expect(4) = 5e-059
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1 / -1
Query: 858 YTVHNCSRTH 829
+TVHNCS TH
Sbjct: 482 FTVHNCSITH 453
Score = 24.4 bits (47), Expect(5) = 5e-064
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3 / +2
Query: 816 LLHNDEF*SNCGL 854
LL N+E *SNCGL
Sbjct: 440 LLLNNEL*SNCGL 478
Score = 24.0 bits (46), Expect(5) = 3e-049
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +1 / +1
Query: 856 VNGGRC*R*SFM 891
VNGG C*R* FM
Sbjct: 478 VNGGSC*R*LFM 513
Score = 23.5 bits (45), Expect(4) = 3e-044
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2 / +1
Query: 791 ILYLVTSTAT 820
+LYLVTSTAT
Sbjct: 418 VLYLVTSTAT 447
Score = 21.7 bits (41), Expect(4) = 3e-044
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2 / +1
Query: 830 *VLEQLWTV 856
*V+EQLWTV
Sbjct: 454 *VIEQLWTV 480
Score = 21.7 bits (41), Expect(5) = 3e-049
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / +3
Query: 820 YIMMSSRAIVDC 855
Y MS RAIVDC
Sbjct: 444 Y*TMSYRAIVDC 479
>gb|BF587278.1|BF587278 FM1_34_D12.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 499
Score = 209 bits (451), Expect = 6e-053
Identities = 82/102 (80%), Positives = 91/102 (89%)
Frame = +2 / +1
Query: 104 MGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFE 283
MGSGS LKV+A NFDVLAGPL++LAYPLYASV+AIETK+ VDDQQWLTYWVLYS ITLFE
Sbjct: 190 MGSGSLLKVVANNFDVLAGPLVALAYPLYASVKAIETKSAVDDQQWLTYWVLYSLITLFE 369
Query: 284 LTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRP 409
LTFA II+WLPFW KL F CWLVLP+FNGAAYVY ++VRP
Sbjct: 370 LTFASIIQWLPFWPSMKLIFICWLVLPYFNGAAYVYQNYVRP 495
Score = 147 bits (315), Expect = 3e-034
Identities = 68/101 (67%), Positives = 77/101 (76%)
Frame = -1 / -3
Query: 387 T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*SSTGFFVS 208
T*AAPL GKT+QQ+K +F Q GSH II A VSSN VINEY TQ VSHC*SST VS
Sbjct: 473 T*AAPLKYGKTSQQIKINFIEGQKGSH*IIDANVSSNNVINEYRTQYVSHC*SSTADLVS 294
Query: 207 IALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPP 85
IALTEAY+G*AS GPARTSK LA+TL +DP+PI ++ P
Sbjct: 293 IALTEAYKG*ASATKGPARTSKLLATTLSRDPEPIAVAGIP 171
Score = 107 bits (228), Expect = 3e-022
Identities = 55/112 (49%), Positives = 71/112 (63%)
Frame = -3 / -2
Query: 403 HKMVVNIGSTIEPRQDQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPVSEPLLIIY 224
H ++V+IG IE RQD+PA K+Q P+ KPL+N K KQ *VQ P+ EPLLII+
Sbjct: 489 HIILVHIGCAIEVRQDKPANKDQFHRRPERKPLNN*CKCEFKQCY**VQDPICEPLLIIH 310
Query: 223 RIFCLYCSNRSI*RISK*YEWPGKDIEVLGQHLEERSGPHLALCSSSSRTEL 68
F LYC N I RIS+ ++ P KD+EV+G LE+RSG H +S S L
Sbjct: 309 SRFGLYCLNGGIQRISQCHQRPCKDVEVVGDDLEQRSGAHRRRRNSKSAPPL 154
>gb|BG817396.1|BG817396 EM1_75_D03.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 504
Score = 208 bits (448), Expect = 1e-052
Identities = 81/101 (80%), Positives = 90/101 (89%)
Frame = +2 / +2
Query: 104 MGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFE 283
MGSGS LKV+A NFDVLAGPL++LAYPLYASV+AIETK+PVDDQQWLTYWVLYS ITLFE
Sbjct: 200 MGSGSLLKVVANNFDVLAGPLVALAYPLYASVKAIETKSPVDDQQWLTYWVLYSLITLFE 379
Query: 284 LTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVR 406
LTFA II+WLPFW KL F CWLVLP+FNGA YVY ++VR
Sbjct: 380 LTFASIIQWLPFWPSMKLIFICWLVLPYFNGATYVYQNYVR 502
Score = 149 bits (320), Expect = 7e-035
Identities = 69/101 (68%), Positives = 77/101 (76%)
Frame = -1 / -1
Query: 387 T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*SSTGFFVS 208
T* APL GKT+QQ+K +F Q GSH II A VSSN VINEY TQ VSHC*SSTG VS
Sbjct: 483 T*VAPLKYGKTSQQIKINFIEGQKGSH*IIDANVSSNNVINEYRTQYVSHC*SSTGDLVS 304
Query: 207 IALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPP 85
IALTEAY+G*AS GPARTSK LA+TL KDP+PI ++ P
Sbjct: 303 IALTEAYKG*ASATKGPARTSKLLATTLSKDPEPIAVAGIP 181
Score = 110 bits (234), Expect = 5e-023
Identities = 56/112 (50%), Positives = 72/112 (64%)
Frame = -3 / -3
Query: 403 HKMVVNIGSTIEPRQDQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPVSEPLLIIY 224
H ++V+IG IE RQD+PA K+Q P+ KPL+N K KQ *VQ P+ EPLLII+
Sbjct: 499 HIILVHIGRAIEVRQDKPANKDQFHRRPERKPLNN*CKCEFKQCY**VQDPICEPLLIIH 320
Query: 223 RIFCLYCSNRSI*RISK*YEWPGKDIEVLGQHLEERSGPHLALCSSSSRTEL 68
R F LYC N I RIS+ ++ P KD+EV+G LE+RSG H +S S L
Sbjct: 319 RRFGLYCLNGGIQRISQCHQRPCKDVEVVGDDLEQRSGAHRRRRNSKSAPPL 164
>gb|CF073329.1|CF073329 FE1_22_C10.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_22_C10_A002 5', mRNA sequence
Length = 605
Score = 149 bits (319), Expect(5) = 7e-049
Identities = 61/85 (71%), Positives = 64/85 (75%)
Frame = +2 / -1
Query: 437 IWYIPRNEKLGKSDDVLSAAERYIEQNGPEAFEXXXXXXXXXXXXXXXXXXXLEDGEAEN 616
IWY+PRNEKLGKSDDVLSAAERYIEQNGPEAFE LE+ EAEN
Sbjct: 605 IWYVPRNEKLGKSDDVLSAAERYIEQNGPEAFEKLISKSTKSSKSRNTKRSILEEAEAEN 426
Query: 617 RAKAERESWGENPFYDKNYRY*TSS 691
RAKAERESW ENPFYDKNYRY*T+S
Sbjct: 425 RAKAERESWDENPFYDKNYRY*TTS 351
Score = 136 bits (291), Expect(4) = 4e-043
Identities = 64/84 (76%), Positives = 67/84 (79%)
Frame = -1 / +1
Query: 690 ELV*YL*FLS*KGFSPHDSLSALARFSASPSSKFNRXXXXXXXXXXXXLMSFSNASGPFC 511
++V*YL*FLS*KGFS HDSLSALA FSAS SSK +R LMSFSNASGPFC
Sbjct: 352 DVV*YL*FLS*KGFSSHDSLSALALFSASASSKIDRFVFLDFEDFVDLLMSFSNASGPFC 531
Query: 510 SIYLSAADRTSSDLPSFSFLGIYH 439
SIYLSAADRTSSDLPSFSFLG YH
Sbjct: 532 SIYLSAADRTSSDLPSFSFLGTYH 603
Score = 130 bits (279), Expect(4) = 4e-036
Identities = 55/83 (66%), Positives = 62/83 (74%)
Frame = +3 / -2
Query: 438 YGIFQEMRS*VNLMMFCQLQRDILNKTDQKHXXXXXXXXXXXXXQGTQSG*TWRMERLKI 617
YG+FQ MRS*VNLMMFCQLQRDIL+K D+KH QGTQSG +WR +RLK
Sbjct: 604 YGMFQGMRS*VNLMMFCQLQRDILSKMDRKHLRSSSASLQSLQNQGTQSGRSWRRQRLKT 425
Query: 618 ELKPRENRGAKIPSTTKTTDTKP 686
EL+ +ENRG KIPSTTK TDTKP
Sbjct: 424 ELRLKENRGMKIPSTTKITDTKP 356
Score = 115 bits (245), Expect(2) = 4e-029
Identities = 55/83 (66%), Positives = 58/83 (69%)
Frame = -3 / +3
Query: 685 GLVSVVFVVEGIFAPRXXXXXXXXXXXXXLQVQPLCVPXXXXXXXLADELLKCFWSVLFN 506
GLVSV+FVVEGIF PR LQ +PLCVP LADELLKCF S+L N
Sbjct: 357 GLVSVIFVVEGIFIPRFSFSLSSVFSLCLLQDRPLCVP*F*RLCRLADELLKCFRSILLN 536
Query: 505 ISLCS*QNIIRFT*LLISWNIPY 437
ISLCS*QNIIRFT*LLI WNIPY
Sbjct: 537 ISLCS*QNIIRFT*LLIPWNIPY 605
Score = 92.3 bits (195), Expect(5) = 4e-026
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +1 / -3
Query: 439 MVYSKK*EAR*I**CSVSCREIY*TKRTRSI*EAHQQVYEVFEVKEHKAVEL 594
MV SK+*EAR*I**CSVSCREIY* K T SI*EAHQQVY+VF++KEHKAV+L
Sbjct: 603 MVCSKE*EAR*I**CSVSCREIY*AKWTGSI*EAHQQVYKVFKIKEHKAVDL 448
Score = 68.4 bits (143), Expect(3) = 7e-028
Identities = 30/35 (85%), Positives = 31/35 (88%)
Frame = -2 / +2
Query: 542 *ASQMLLVRFVQYISLQLTEHHQIYLASHFLEYTI 438
*ASQML V F QYISLQLTEHHQIYLASH LE+TI
Sbjct: 500 *ASQMLPVHFAQYISLQLTEHHQIYLASHSLEHTI 604
Score = 62.0 bits (129), Expect(3) = 7e-028
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = -2 / +2
Query: 686 WFSICSFCRRRDFRPTILSRL*LDFQPLHPP 594
WFSIC+FCRRRDF PTIL + *L FQPL PP
Sbjct: 356 WFSICNFCRRRDFHPTILFQP*LCFQPLPPP 448
Score = 43.2 bits (88), Expect(4) = 4e-043
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = -1 / +3
Query: 828 HYVVAVDVTRYNIQSQKYGNVVFGPTQLKLA*GS*ARS 715
H +VAVDVTRY+ +S+ + + + T+LKLA GS*ARS
Sbjct: 219 HCLVAVDVTRYSTESEIWESRLQSVTRLKLAWGS*ARS 332
Score = 36.8 bits (74), Expect(4) = 4e-036
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1 / -1
Query: 718 PCSRASCKL*LRRTEDDIPIFLTLNIVPCYIHCY 819
PC A C+L* R + L+ VPCYIHCY
Sbjct: 329 PCL*APCEL*PRHRLKTTFPYF*LSTVPCYIHCY 228
Score = 35.0 bits (70), Expect(5) = 7e-049
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3 / -3
Query: 738 QALVAXXXXXXXXXXXXEYCTLLHPLLLHND 830
+AL A +YCTLLHPLLL+N+
Sbjct: 309 RALAASQTEDDFPIFLTQYCTLLHPLLLNNE 217
Score = 35.0 bits (70), Expect(2) = 4e-029
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = -2 / +1
Query: 830 IIM**QWM*QGTIFRVRNMGMSSSVRRN*SLHEAREQG 717
+I+**QWM*QGT+ + + S+ R *S H A +QG
Sbjct: 217 LIV**QWM*QGTVLSQKYGKVVFSL*RG*SSHGAHKQG 330
Score = 33.1 bits (66), Expect(3) = 7e-028
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / +2
Query: 811 GCNKVQYSESEIWECRLRSDATKACMRLVSKV 716
GCNKVQY + + DA KA M L+SKV
Sbjct: 236 GCNKVQY*VRNMGKSSSVCDAAKARMGLISKV 331
Score = 32.7 bits (65), Expect(5) = 7e-049
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3 / -1
Query: 855 CKWR*MLALIVYVLF 899
CKWR*+LA+I+YV F
Sbjct: 197 CKWR*LLAMIIYVSF 153
Score = 32.7 bits (65), Expect(5) = 4e-026
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / -3
Query: 637 IVGRKSLLRQKLQILN 684
IVG KSLLRQKLQILN
Sbjct: 405 IVG*KSLLRQKLQILN 358
Score = 29.0 bits (57), Expect(5) = 7e-049
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2 / -2
Query: 683 TSSKSTQQFEDDLAHEPHASFSCV 754
T + + DLA+EPHASFS V
Sbjct: 364 TKPRPLGSLKTDLAYEPHASFSRV 293
Score = 28.1 bits (55), Expect(4) = 4e-043
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2 / +3
Query: 902 SKKHIND*R*HLPPFT 855
+K HIN+ R* LPPFT
Sbjct: 150 TKAHINNHR*QLPPFT 197
Score = 25.4 bits (49), Expect(5) = 4e-026
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / -3
Query: 754 RTEDDIPIFLT 786
+TEDD PIFLT
Sbjct: 291 QTEDDFPIFLT 259
Score = 25.4 bits (49), Expect(4) = 4e-043
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1 / +3
Query: 858 YTVHNCSRTH 829
+TVHNCS TH
Sbjct: 192 FTVHNCSITH 221
Score = 24.4 bits (47), Expect(5) = 7e-049
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3 / -3
Query: 816 LLHNDEF*SNCGL 854
LL N+E *SNCGL
Sbjct: 234 LLLNNEL*SNCGL 196
Score = 24.0 bits (46), Expect(4) = 4e-036
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +1 / -2
Query: 856 VNGGRC*R*SFM 891
VNGG C*R* FM
Sbjct: 196 VNGGSC*R*LFM 161
Score = 23.5 bits (45), Expect(5) = 4e-026
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2 / -2
Query: 791 ILYLVTSTAT 820
+LYLVTSTAT
Sbjct: 256 VLYLVTSTAT 227
Score = 21.7 bits (41), Expect(5) = 4e-026
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2 / -2
Query: 830 *VLEQLWTV 856
*V+EQLWTV
Sbjct: 220 *VIEQLWTV 194
Score = 21.7 bits (41), Expect(4) = 4e-036
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / -1
Query: 820 YIMMSSRAIVDC 855
Y MS RAIVDC
Sbjct: 230 Y*TMSYRAIVDC 195
>gb|BI075210.1|BI075210 IP1_17_E01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 453
Score = 183 bits (395), Expect = 3e-045
Identities = 72/88 (81%), Positives = 79/88 (89%)
Frame = +2 / +2
Query: 104 MGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFE 283
MGSGS LKV+A NFDVLAGPL++LAYPLYASV+AIETK+PVDDQQWLTYWVLYS ITLFE
Sbjct: 188 MGSGSLLKVVANNFDVLAGPLVALAYPLYASVKAIETKSPVDDQQWLTYWVLYSLITLFE 367
Query: 284 LTFAPIIEWLPFWSYAKLFFNCWLVLPW 367
LTFA II+WLPFW KL F CWLVLP+
Sbjct: 368 LTFASIIQWLPFWPSMKLIFICWLVLPY 451
Score = 140 bits (300), Expect = 4e-032
Identities = 64/93 (68%), Positives = 72/93 (77%)
Frame = -1 / -1
Query: 363 GKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*SSTGFFVSIALTEAYR 184
GKT+QQ+K +F Q GSH II A VSSN VINEY TQ VSHC*SSTG VSIALTEAY+
Sbjct: 447 GKTSQQIKINFIEGQKGSH*IIDANVSSNNVINEYRTQYVSHC*SSTGDLVSIALTEAYK 268
Query: 183 G*ASDMSGPARTSKFLASTLRKDPDPILLSAPP 85
G*AS GPARTSK LA+TL KDP+PI ++ P
Sbjct: 267 G*ASATKGPARTSKLLATTLSKDPEPIAVAGIP 169
>gb|BM329363.1|BM329363 PIC1_36_H02.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 498
Score = 120 bits (257), Expect(4) = 3e-037
Identities = 59/83 (71%), Positives = 63/83 (75%)
Frame = -1 / -2
Query: 690 ELV*YL*FLS*KGFSPHDSLSALARFSASPSSKFNRXXXXXXXXXXXXLMSFSNASGPFC 511
++V YL*FLS*KGFS HDSLS LA FSAS SS +R LM+FSNASGPFC
Sbjct: 251 DVVYYL*FLS*KGFSSHDSLSDLALFSASASS*NDRFVFLDFEHFVDLLMNFSNASGPFC 72
Query: 510 SIYLSAADRTSSDLPSFSFLGIY 442
SIYLSAADRTSSDLPSFSFLG Y
Sbjct: 71 SIYLSAADRTSSDLPSFSFLGTY 3
Score = 118 bits (252), Expect(3) = 4e-029
Identities = 52/82 (63%), Positives = 59/82 (71%)
Frame = +3 / +2
Query: 441 GIFQEMRS*VNLMMFCQLQRDILNKTDQKHXXXXXXXXXXXXXQGTQSG*TWRMERLKIE 620
G+FQ MRS*VNLMMFCQLQRDIL+K D+KH QGTQSG + R +RLK E
Sbjct: 2 GMFQGMRS*VNLMMFCQLQRDILSKMDRKHLRSSSASLQSVQNQGTQSGRSRRRQRLKTE 181
Query: 621 LKPRENRGAKIPSTTKTTDTKP 686
L +ENRG KIPSTTK TD+KP
Sbjct: 182 LSLKENRGMKIPSTTKITDSKP 247
Score = 107 bits (229), Expect(2) = 2e-026
Identities = 52/82 (63%), Positives = 56/82 (68%)
Frame = -3 / -1
Query: 685 GLVSVVFVVEGIFAPRXXXXXXXXXXXXXLQVQPLCVPXXXXXXXLADELLKCFWSVLFN 506
GL+SV+FVVEGIF PR L +PLCVP LADELLKCF S+L N
Sbjct: 246 GLLSVIFVVEGIFIPRFSFRLSSVFSLCLLLERPLCVP*F*TLCRLADELLKCFRSILLN 67
Query: 505 ISLCS*QNIIRFT*LLISWNIP 440
ISLCS*QNIIRFT*LLI WNIP
Sbjct: 66 ISLCS*QNIIRFT*LLIPWNIP 1
Score = 86.3 bits (182), Expect(5) = 1e-039
Identities = 41/51 (80%), Positives = 45/51 (88%)
Frame = +1 / +3
Query: 442 VYSKK*EAR*I**CSVSCREIY*TKRTRSI*EAHQQVYEVFEVKEHKAVEL 594
V SK+*EAR*I**CSVSCREIY* K T SI*E HQQVY+VF++KEHKAV L
Sbjct: 3 VCSKE*EAR*I**CSVSCREIY*AKWTGSI*EVHQQVYKVFKIKEHKAVVL 155
Score = 66.1 bits (138), Expect(5) = 1e-039
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +2 / +1
Query: 596 EDGEAENRAKAERESWGENPFYDKNYRY*TSS 691
E+ EAENRAK+ERESW ENPFYDKNYR *T+S
Sbjct: 157 EEAEAENRAKSERESWDENPFYDKNYR**TTS 252
Score = 64.8 bits (135), Expect(3) = 2e-026
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = -2 / -3
Query: 542 *ASQMLLVRFVQYISLQLTEHHQIYLASHFLEYT 441
* SQML V F QYISLQLTEHHQIYLASH LE+T
Sbjct: 103 *TSQMLPVHFAQYISLQLTEHHQIYLASHSLEHT 2
Score = 61.6 bits (128), Expect(3) = 2e-026
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = -2 / -3
Query: 686 WFSICSFCRRRDFRPTILSRL*LDFQPLHPP 594
WF+IC+FCRRRDF PTIL + *L FQPL PP
Sbjct: 247 WFTICNFCRRRDFHPTILFQT*LCFQPLPPP 155
Score = 41.4 bits (84), Expect(4) = 3e-037
Identities = 19/38 (50%), Positives = 29/38 (76%)
Frame = -1 / -1
Query: 828 HYVVAVDVTRYNIQSQKYGNVVFGPTQLKLA*GS*ARS 715
H +++VDVTRY+ +S+ + + + T+LKLA GS*ARS
Sbjct: 384 HCLISVDVTRYSTESEIWESRLQSVTRLKLAWGS*ARS 271
Score = 34.1 bits (68), Expect(5) = 1e-039
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3 / +3
Query: 738 QALVAXXXXXXXXXXXXEYCTLLHPLLLHND 830
+AL A +YCTLLHPL+L+N+
Sbjct: 294 RALAASQTEDDFPIFLTQYCTLLHPLILNNE 386
Score = 33.1 bits (66), Expect(2) = 2e-026
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / -3
Query: 811 GCNKVQYSESEIWECRLRSDATKACMRLVSKV 716
GCNKVQY + + DA KA M L+SKV
Sbjct: 367 GCNKVQY*VRNMGKSSSVCDAAKARMGLISKV 272
Score = 32.7 bits (65), Expect(3) = 2e-026
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -2 / -2
Query: 830 IIM**QWM*QGTIFRVRNMGMSSSVRRN*SLHEAREQG 717
+I+* QWM*QGT+ + + S+ R *S H A +QG
Sbjct: 386 LIV*YQWM*QGTVLSQKYGKVVFSL*RG*SSHGAHKQG 273
Score = 30.9 bits (61), Expect(3) = 4e-029
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1 / +1
Query: 718 PCSRASCKL*LRRTEDDIPIFLTLNIVPCYIHCY 819
PC A C+L* R + L+ VPCYIH Y
Sbjct: 274 PCL*APCEL*PRHRLKTTFPYF*LSTVPCYIH*Y 375
Score = 28.1 bits (55), Expect(5) = 1e-039
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +2 / +2
Query: 716 DLAHEPHASFSCV 754
DLA+EPHASFS V
Sbjct: 272 DLAYEPHASFSRV 310
Score = 25.8 bits (50), Expect(4) = 3e-037
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / -1
Query: 902 SKKHIND*R*HLPPFT 855
+K HI++ R* LPPFT
Sbjct: 453 TKAHISNHR*QLPPFT 406
Score = 25.4 bits (49), Expect(4) = 3e-037
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1 / -1
Query: 858 YTVHNCSRTH 829
+TVHNCS TH
Sbjct: 411 FTVHNCSITH 382
Score = 23.5 bits (45), Expect(5) = 1e-039
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +3
Query: 816 LLHNDEF*SNCGL 854
L+ N+E *SNCGL
Sbjct: 369 LILNNEL*SNCGL 407
Score = 21.7 bits (41), Expect(3) = 4e-029
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / +1
Query: 820 YIMMSSRAIVDC 855
Y MS RAIVDC
Sbjct: 373 Y*TMSYRAIVDC 408
>gb|CW486008.1|CW486008 fsbb001f249a14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f249a14, DNA
sequence
Length = 734
Score = 74.4 bits (156), Expect(6) = 2e-031
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +2 / +1
Query: 593 LEDGEAENRAKAERESWGENPFYDKNYRY*TSS 691
LE+ EAENRAKAERESW ENPFYDKNYRY*T+S
Sbjct: 85 LEEAEAENRAKAERESWDENPFYDKNYRY*TTS 183
Score = 62.0 bits (129), Expect(4) = 2e-021
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = -2 / -2
Query: 686 WFSICSFCRRRDFRPTILSRL*LDFQPLHPP 594
WFSIC+FCRRRDF PTIL + *L FQPL PP
Sbjct: 178 WFSICNFCRRRDFHPTILFQP*LCFQPLPPP 86
Score = 43.2 bits (88), Expect(4) = 2e-021
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = -1 / -2
Query: 828 HYVVAVDVTRYNIQSQKYGNVVFGPTQLKLA*GS*ARS 715
H +VAVDVTRY+ +S+ + + + T+LKLA GS*ARS
Sbjct: 400 HCLVAVDVTRYSTESEIWESRLQSVTRLKLAWGS*ARS 287
Score = 35.0 bits (70), Expect(6) = 2e-031
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3 / +1
Query: 738 QALVAXXXXXXXXXXXXEYCTLLHPLLLHND 830
+AL A +YCTLLHPLLL+N+
Sbjct: 310 RALAASQTEDDFPIFLTQYCTLLHPLLLNNE 402
Score = 32.7 bits (65), Expect(6) = 2e-031
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3 / +2
Query: 855 CKWR*MLALIVYVLF 899
CKWR*+LA+I+YV F
Sbjct: 422 CKWR*LLAMIIYVSF 466
Score = 31.8 bits (63), Expect(6) = 2e-031
Identities = 11/15 (73%), Positives = 15/15 (100%)
Frame = +1 / +3
Query: 550 VYEVFEVKEHKAVEL 594
VY+VF++KEHKAV+L
Sbjct: 42 VYKVFKIKEHKAVDL 86
Score = 28.1 bits (55), Expect(6) = 2e-031
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +2 / +3
Query: 716 DLAHEPHASFSCV 754
DLA+EPHASFS V
Sbjct: 288 DLAYEPHASFSRV 326
Score = 28.1 bits (55), Expect(4) = 2e-021
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2 / -2
Query: 902 SKKHIND*R*HLPPFT 855
+K HIN+ R* LPPFT
Sbjct: 469 TKAHINNHR*QLPPFT 422
Score = 25.4 bits (49), Expect(4) = 2e-021
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 858 YTVHNCSRTH 829
+TVHNCS TH
Sbjct: 427 FTVHNCSITH 398
Score = 24.4 bits (47), Expect(6) = 2e-031
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3 / +1
Query: 816 LLHNDEF*SNCGL 854
LL N+E *SNCGL
Sbjct: 385 LLLNNEL*SNCGL 423
>gb|CW165735.1|CW165735 104_574_11152669_116_36484_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11152669, DNA
sequence
Length = 678
Score = 116 bits (249), Expect = 4e-025
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = -1 / +2
Query: 543 MSFSNASGPFCSIYLSAADRTSSDLPSFSFLGIYHMFTIWRFTNIGRT 400
MSFSNASGPFCSIYLSAADRTSSDLPSFSFLG YHMFTIWRFTN+GRT
Sbjct: 533 MSFSNASGPFCSIYLSAADRTSSDLPSFSFLGTYHMFTIWRFTNVGRT 676
Score = 112 bits (240), Expect = 7e-024
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = -3 / +1
Query: 547 ADELLKCFWSVLFNISLCS*QNIIRFT*LLISWNIPYVHYLAVHKHWPHK 398
ADELLKCF S+L NISLCS*QNIIRFT*LLI WNIPYVHYLAVHK WPHK
Sbjct: 529 ADELLKCFRSILLNISLCS*QNIIRFT*LLIPWNIPYVHYLAVHKRWPHK 678
Score = 110 bits (235), Expect = 4e-023
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +2 / -1
Query: 398 FVRPMFVNRQIVNIWYIPRNEKLGKSDDVLSAAERYIEQNGPEAFE 535
FVRP FVNRQIVNIWY+PRNEKLGKSDDVLSAAERYIEQNGPEAFE
Sbjct: 678 FVRPTFVNRQIVNIWYVPRNEKLGKSDDVLSAAERYIEQNGPEAFE 541
>gb|CF769332.1|CF769332 DSBF1_1_B03.b1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_1_B03_A010 5', mRNA sequence
Length = 409
Score = 65.2 bits (136), Expect(5) = 1e-024
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +2 / +3
Query: 611 ENRAKAERESWGENPFYDKNYRY*TSS 691
ENRAKAERESW ENPFYDKNYRY*T+S
Sbjct: 3 ENRAKAERESWDENPFYDKNYRY*TTS 83
Score = 35.0 bits (70), Expect(5) = 1e-024
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3 / +2
Query: 738 QALVAXXXXXXXXXXXXEYCTLLHPLLLHND 830
+AL A +YCTLLHPLLL+N+
Sbjct: 125 RALAASQTEDDFPIFLTQYCTLLHPLLLNNE 217
Score = 32.7 bits (65), Expect(5) = 1e-024
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3 / +3
Query: 855 CKWR*MLALIVYVLF 899
CKWR*+LA+I+YV F
Sbjct: 237 CKWR*LLAMIIYVSF 281
Score = 29.0 bits (57), Expect(5) = 1e-024
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2 / +1
Query: 683 TSSKSTQQFEDDLAHEPHASFSCV 754
T + + DLA+EPHASFS V
Sbjct: 70 TKPRPLGSLKTDLAYEPHASFSRV 141
Score = 24.4 bits (47), Expect(5) = 1e-024
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3 / +2
Query: 816 LLHNDEF*SNCGL 854
LL N+E *SNCGL
Sbjct: 200 LLLNNEL*SNCGL 238
>gb|CF770196.1|CF770196 DSBF1_6_F05.b1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_6_F05_A010 5', mRNA sequence
Length = 411
Score = 65.2 bits (136), Expect(5) = 1e-024
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +2 / +3
Query: 611 ENRAKAERESWGENPFYDKNYRY*TSS 691
ENRAKAERESW ENPFYDKNYRY*T+S
Sbjct: 3 ENRAKAERESWDENPFYDKNYRY*TTS 83
Score = 35.0 bits (70), Expect(5) = 1e-024
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3 / +2
Query: 738 QALVAXXXXXXXXXXXXEYCTLLHPLLLHND 830
+AL A +YCTLLHPLLL+N+
Sbjct: 125 RALAASQTEDDFPIFLTQYCTLLHPLLLNNE 217
Score = 32.7 bits (65), Expect(5) = 1e-024
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3 / +3
Query: 855 CKWR*MLALIVYVLF 899
CKWR*+LA+I+YV F
Sbjct: 237 CKWR*LLAMIIYVSF 281
Score = 29.0 bits (57), Expect(5) = 1e-024
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2 / +1
Query: 683 TSSKSTQQFEDDLAHEPHASFSCV 754
T + + DLA+EPHASFS V
Sbjct: 70 TKPRPLGSLKTDLAYEPHASFSRV 141
Score = 24.4 bits (47), Expect(5) = 1e-024
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3 / +2
Query: 816 LLHNDEF*SNCGL 854
LL N+E *SNCGL
Sbjct: 200 LLLNNEL*SNCGL 238
>gb|CF769417.1|CF769417 DSBF1_1_B03.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_1_B03_A010 3', mRNA sequence
Length = 392
Score = 65.2 bits (136), Expect(5) = 1e-024
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +2 / +3
Query: 611 ENRAKAERESWGENPFYDKNYRY*TSS 691
ENRAKAERESW ENPFYDKNYRY*T+S
Sbjct: 3 ENRAKAERESWDENPFYDKNYRY*TTS 83
Score = 35.0 bits (70), Expect(5) = 1e-024
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3 / +2
Query: 738 QALVAXXXXXXXXXXXXEYCTLLHPLLLHND 830
+AL A +YCTLLHPLLL+N+
Sbjct: 125 RALAASQTEDDFPIFLTQYCTLLHPLLLNNE 217
Score = 32.7 bits (65), Expect(5) = 1e-024
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3 / +3
Query: 855 CKWR*MLALIVYVLF 899
CKWR*+LA+I+YV F
Sbjct: 237 CKWR*LLAMIIYVSF 281
Score = 29.0 bits (57), Expect(5) = 1e-024
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2 / +1
Query: 683 TSSKSTQQFEDDLAHEPHASFSCV 754
T + + DLA+EPHASFS V
Sbjct: 70 TKPRPLGSLKTDLAYEPHASFSRV 141
Score = 24.4 bits (47), Expect(5) = 1e-024
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3 / +2
Query: 816 LLHNDEF*SNCGL 854
LL N+E *SNCGL
Sbjct: 200 LLLNNEL*SNCGL 238
>gb|CF770272.1|CF770272 DSBF1_6_F05.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_6_F05_A010 3', mRNA sequence
Length = 390
Score = 65.2 bits (136), Expect(5) = 1e-024
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +2 / +3
Query: 611 ENRAKAERESWGENPFYDKNYRY*TSS 691
ENRAKAERESW ENPFYDKNYRY*T+S
Sbjct: 3 ENRAKAERESWDENPFYDKNYRY*TTS 83
Score = 35.0 bits (70), Expect(5) = 1e-024
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3 / +2
Query: 738 QALVAXXXXXXXXXXXXEYCTLLHPLLLHND 830
+AL A +YCTLLHPLLL+N+
Sbjct: 125 RALAASQTEDDFPIFLTQYCTLLHPLLLNNE 217
Score = 32.7 bits (65), Expect(5) = 1e-024
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3 / +3
Query: 855 CKWR*MLALIVYVLF 899
CKWR*+LA+I+YV F
Sbjct: 237 CKWR*LLAMIIYVSF 281
Score = 29.0 bits (57), Expect(5) = 1e-024
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2 / +1
Query: 683 TSSKSTQQFEDDLAHEPHASFSCV 754
T + + DLA+EPHASFS V
Sbjct: 70 TKPRPLGSLKTDLAYEPHASFSRV 141
Score = 24.4 bits (47), Expect(5) = 1e-024
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3 / +2
Query: 816 LLHNDEF*SNCGL 854
LL N+E *SNCGL
Sbjct: 200 LLLNNEL*SNCGL 238
>gb|CW451391.1|CW451391 fsbb001f191h03f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f191h03, DNA
sequence
Length = 591
Score = 73.9 bits (155), Expect(2) = 2e-024
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = +2 / -2
Query: 188 YASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEW 310
YAS+RAIE+ + +DDQQWLTYWVLYS ITLFEL+ +++W
Sbjct: 356 YASMRAIESPSSLDDQQWLTYWVLYSLITLFELSCWKVLQW 234
Score = 60.2 bits (125), Expect(2) = 2e-024
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +2 / -1
Query: 314 PFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMF 415
P W Y KL F CWLVLP FNGAAY+Y+ VR F
Sbjct: 120 PLWPYMKLLFCCWLVLPIFNGAAYIYEAHVRRYF 19
>gb|CW113797.1|CW113797 104_488_11105645_116_34559_027 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11105645, DNA
sequence
Length = 649
Score = 110 bits (235), Expect = 4e-023
Identities = 39/73 (53%), Positives = 54/73 (73%)
Frame = +2 / -2
Query: 188 YASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPW 367
YASV A+E+ + VDD+QWL+YW++YSFITL E+ P++ W+P W KL F WLVLP
Sbjct: 639 YASVCAMESPSKVDDEQWLSYWIIYSFITLLEMLAEPLLYWIPVWYPVKLLFVAWLVLPQ 460
Query: 368 FNGAAYVYDHFVR 406
F GA+++Y+ VR
Sbjct: 459 FKGASFIYEKLVR 421
>gb|CW190211.1|CW190211 104_611_11174383_148_36750_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11174383, DNA
sequence
Length = 665
Score = 110 bits (235), Expect = 4e-023
Identities = 39/73 (53%), Positives = 54/73 (73%)
Frame = +2 / -1
Query: 188 YASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPW 367
YASV A+E+ + VDD+QWL+YW++YSFITL E+ P++ W+P W KL F WLVLP
Sbjct: 350 YASVCAMESPSKVDDEQWLSYWIIYSFITLLEMLAEPLLYWIPVWYPVKLLFVAWLVLPQ 171
Query: 368 FNGAAYVYDHFVR 406
F GA+++Y+ VR
Sbjct: 170 FKGASFIYEKLVR 132
>gb|CW211376.1|CW211376 104_642_11190476_116_37017_078 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11190476, DNA
sequence
Length = 689
Score = 95.5 bits (202), Expect(2) = 4e-023
Identities = 34/57 (59%), Positives = 42/57 (73%)
Frame = +2 / -3
Query: 311 LPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQIVNIWYIPRNEKLGKSDD 481
LPFW KL F CWLVLP+FNGAAYVY ++VRP F+ Q+VNIWY+P+ + L D
Sbjct: 417 LPFWPSMKLIFICWLVLPYFNGAAYVYQNYVRPAFIKNQMVNIWYVPQKKGLFGKSD 247
Score = 34.5 bits (69), Expect(2) = 4e-023
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +2 / -3
Query: 467 GKSDDVLSAAERYIEQNGPEAFE 535
GKSDD L+A ++++E+NG +A +
Sbjct: 258 GKSDDFLTALDKFVEENGTDALK 190
>gb|CW329729.1|CW329729 104_826_11479998_148_35997_025 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479998, DNA
sequence
Length = 676
Score = 80.3 bits (169), Expect(2) = 4e-023
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +2 / +3
Query: 161 PLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEW 310
P + L YPLYASV+A+E+ + +DD+QWL YW+LYSFITL E+ +I W
Sbjct: 63 PTVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSFITLMEMVLESLIYW 212
Score = 49.6 bits (102), Expect(2) = 4e-023
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +2 / +3
Query: 311 LPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVR 406
+P W KL F WL LP F GAA++YD FVR
Sbjct: 303 IPIWYELKLLFIAWLALPNFRGAAFIYDKFVR 398
>gb|CW211377.1|CW211377 104_642_11190476_148_37016_078 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11190476, DNA
sequence
Length = 707
Score = 71.2 bits (149), Expect(2) = 4e-022
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2 / +2
Query: 311 LPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFV 418
LPFW KL F CWLVLP+FNGAAYVY ++VRP F+
Sbjct: 599 LPFWPSMKLIFICWLVLPYFNGAAYVYQNYVRPAFI 706
Score = 57.9 bits (120), Expect(2) = 4e-022
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +2 / +3
Query: 239 WLTYWVLYSFITLFELTFAPIIEW 310
WLTYWVLYS ITLFELTFA II+W
Sbjct: 3 WLTYWVLYSLITLFELTFASIIQW 74
>gb|CW162368.1|CW162368 104_569_11150905_148_36439_005 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11150905, DNA
sequence
Length = 723
Score = 61.1 bits (127), Expect(3) = 4e-022
Identities = 25/51 (49%), Positives = 30/51 (58%)
Frame = +2 / -2
Query: 314 PFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQIVNIWYIPRNEKL 466
P W Y KL F CWLVLP FNGAAY+Y+ VR F V+ Y R ++
Sbjct: 524 PLWPYMKLLFCCWLVLPIFNGAAYIYEAHVRRYFKIGNYVSPIYNERQRRV 372
Score = 57.9 bits (120), Expect(3) = 4e-022
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +2 / -3
Query: 227 DDQQWLTYWVLYSFITLFELTFAPIIEW 310
DDQQWLTYWVLYS ITLFEL+ +++W
Sbjct: 721 DDQQWLTYWVLYSLITLFELSCWKVLQW 638
Score = 24.9 bits (48), Expect(3) = 4e-022
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2 / -2
Query: 479 DVLSAAERYIEQNGPEAFE 535
D + ER+IE +GP+A +
Sbjct: 353 DARKSVERFIETHGPDALD 297
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,211,914,143
Number of Sequences: 832831
Number of extensions: 17414667
Number of successful extensions: 96265
Number of sequences better than 1.0e-020: 30
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 34450408492
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)