TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2949673.2.1
(636 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN138045.1|CN138045 OX1_61_H04.b1_A002 Oxidatively-stres... 244 8e-064
gb|CD428180.1|CD428180 ETH1_28_C02.b1_A002 Ethylene-treated... 237 1e-061
gb|CD462540.1|CD462540 ETH1_38_C08.b1_A002 Ethylene-treated... 237 1e-061
gb|CX608350.1|CX608350 ANR1_38_C09.b1_A002 Anaerobic roots ... 237 1e-061
gb|CX622493.1|CX622493 GABR1_64_G03.b2_A002 GA- or brassino... 227 1e-058
gb|CW027561.1|CW027561 104_254_10498588_116_30396 Sorghum m... 191 1e-058
gb|CF431001.1|CF431001 NIT1_4_D08.b1_A002 Nitrogen-deficien... 226 2e-058
gb|CN134387.1|CN134387 OX1_26_C04.b1_A002 Oxidatively-stres... 191 1e-057
gb|BF587706.1|BF587706 FM1_39_F09.g1_A003 Floral-Induced Me... 224 1e-057
gb|CX622436.1|CX622436 GABR1_64_A04.b2_A002 GA- or brassino... 222 4e-057
gb|BG159378.1|BG159378 OV2_7_A11.g1_A002 Ovary 2 (OV2) Sorg... 216 3e-055
gb|CN143114.1|CN143114 WOUND1_14_E12.b1_A002 Wounded leaves... 212 3e-054
gb|CF432804.1|CF432804 NIT1_19_E10.b1_A002 Nitrogen-deficie... 207 2e-052
gb|CW465934.1|CW465934 fsbb001f216o21k0 Sorghum methylation... 191 4e-052
gb|CF430956.1|CF430956 NIT1_4_F06.b1_A002 Nitrogen-deficien... 204 1e-051
gb|CN148699.1|CN148699 WOUND1_58_F02.b1_A002 Wounded leaves... 202 5e-051
gb|CN131793.1|CN131793 OX1_2_G05.b1_A002 Oxidatively-stress... 196 3e-049
gb|CW122627.1|CW122627 104_501_11110773_116_34677_085 Sorgh... 191 3e-049
gb|BG355941.2|BG355941 EM1_18_E06.g1_A002 Embryo 1 (EM1) So... 193 2e-048
gb|CX614740.1|CX614740 GABR1_16_B02.b1_A002 GA- or brassino... 193 3e-048
gb|BG052001.1|BG052001 RHIZ2_7_F11.g1_A003 Rhizome2 (RHIZ2)... 192 5e-048
gb|BG559907.1|BG559907 RHIZ2_75_B06.g1_A003 Rhizome2 (RHIZ2... 192 5e-048
gb|CW032099.1|CW032099 104_261_10501183_114_30363 Sorghum m... 191 8e-048
gb|CW391632.1|CW391632 fsbb001f077n22k0 Sorghum methylation... 191 8e-048
gb|CN147510.1|CN147510 WOUND1_50_E09.b1_A002 Wounded leaves... 191 8e-048
gb|CW038410.1|CW038410 104_270_10504910_115_30386 Sorghum m... 191 1e-047
gb|CD229956.1|CD229956 SS1_40_H11.b1_A012 Salt-stressed see... 191 1e-047
gb|CN149533.1|CN149533 WOUND1_63_H02.b1_A002 Wounded leaves... 189 3e-047
gb|CF429876.1|CF429876 PH1_25_A07.b1_A002 Phosphorous-defic... 133 5e-047
gb|CN145887.1|CN145887 WOUND1_36_A11.b1_A002 Wounded leaves... 188 5e-047
gb|CF480170.1|CF480170 POL1_64_D07.b1_A002 Pollen Sorghum b... 183 2e-045
gb|CW409779.1|CW409779 fsbb001f104d18f0 Sorghum methylation... 150 2e-045
gb|CF431564.1|CF431564 NIT1_8_B02.b1_A002 Nitrogen-deficien... 171 1e-041
gb|CD225116.1|CD225116 CCC1_38_B06.b1_A007 Callus culture/c... 165 5e-040
gb|CD227113.1|CD227113 CCC1_4_B10.b1_A007 Callus culture/ce... 165 5e-040
gb|CD203869.1|CD203869 HS1_2_H07.b1_A012 Heat-shocked seedl... 163 2e-039
gb|CF484412.1|CF484412 POL1_25_D12.b1_A002 Pollen Sorghum b... 163 3e-039
gb|CF757955.1|CF757955 DSAF1_25_E02.g1_A011 Drought-stresse... 156 2e-037
gb|BI075108.1|BI075108 IP1_19_G01.g1_A002 Immature pannicle... 155 4e-037
gb|CN148236.1|CN148236 WOUND1_55_B09.b1_A002 Wounded leaves... 155 4e-037
gb|CF487816.1|CF487816 POL1_46_C06.b1_A002 Pollen Sorghum b... 154 1e-036
gb|BG466123.1|BG466123 RHIZ2_48_H07.g1_A003 Rhizome2 (RHIZ2... 148 1e-034
gb|CN140813.1|CN140813 OX1_47_F12.b1_A002 Oxidatively-stres... 146 3e-034
gb|BM328692.1|BM328692 PIC1_25_D10.g1_A002 Pathogen-infecte... 144 2e-033
gb|BG241324.1|BG241324 RHIZ2_49_A04.g1_A003 Rhizome2 (RHIZ2... 142 6e-033
gb|CN137709.1|CN137709 OX1_59_B11.b1_A002 Oxidatively-stres... 80 3e-031
gb|CN149190.1|CN149190 WOUND1_61_F05.b1_A002 Wounded leaves... 80 3e-031
gb|CX610663.1|CX610663 ANR1_20_C10.b1_A002 Anaerobic roots ... 80 3e-031
gb|CX612412.1|CX612412 GABR1_2_G03.b1_A002 GA- or brassinol... 80 3e-031
gb|CX611730.1|CX611730 ANR1_26_H06.b1_A002 Anaerobic roots ... 80 3e-031
gb|CX612747.1|CX612747 GABR1_4_F03.b1_A002 GA- or brassinol... 80 3e-031
gb|CN142753.1|CN142753 WOUND1_12_B02.b1_A002 Wounded leaves... 80 3e-031
gb|CN140557.1|CN140557 OX1_45_C11.b1_A002 Oxidatively-stres... 80 2e-030
gb|CX609322.1|CX609322 ANR1_12_A12.b1_A002 Anaerobic roots ... 76 2e-029
gb|CX612403.1|CX612403 GABR1_2_F05.b1_A002 GA- or brassinol... 76 2e-029
gb|CD234642.1|CD234642 SS1_17_F09.b1_A012 Salt-stressed see... 76 2e-029
gb|CD430130.1|CD430130 ETH1_17_H05.b1_A002 Ethylene-treated... 76 2e-029
gb|CF427705.1|CF427705 PH1_10_G01.b1_A002 Phosphorous-defic... 121 1e-026
gb|CW460719.1|CW460719 fsbb001f208a16k0 Sorghum methylation... 76 2e-026
gb|CD206169.1|CD206169 HS1_21_G09.b1_A012 Heat-shocked seed... 82 3e-026
gb|CW021131.1|CW021131 104_109_10409366_114_30490 Sorghum m... 119 3e-026
gb|BG357604.1|BG357604 OV2_32_A04.g1_A002 Ovary 2 (OV2) Sor... 78 4e-026
gb|BG048260.1|BG048260 OV1_16_A02.g1_A002 Ovary 1 (OV1) Sor... 117 2e-025
gb|CW027560.1|CW027560 104_254_10498588_114_30395 Sorghum m... 77 1e-024
gb|BE593454.1|BE593454 WS1_98_A11.b1_A002 Water-stressed 1 ... 113 2e-024
gb|CW222417.1|CW222417 104_657_11202363_116_37176_002 Sorgh... 111 8e-024
gb|BG465898.1|BG465898 RHIZ2_46_A02.g1_A003 Rhizome2 (RHIZ2... 106 2e-022
gb|CX608992.1|CX608992 ANR1_10_A12.b1_A002 Anaerobic roots ... 76 9e-022
>gb|CN138045.1|CN138045 OX1_61_H04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_61_H04_A002 3', mRNA sequence
Length = 698
Score = 244 bits (528), Expect = 8e-064
Identities = 103/147 (70%), Positives = 120/147 (81%)
Frame = -2 / +2
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPM 456
VIS+S GKRDEALGRLGADAFLVS D QM+AAA TLDG+IDTVSA H +VPLL LLKPM
Sbjct: 59 VISSSPGKRDEALGRLGADAFLVSHDAAQMKAAAATLDGIIDTVSAGHQIVPLLALLKPM 238
Query: 455 GQMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMD 276
GQMVVVG P+ PL++PA+++ +CQAMLDFAGEHG+TAD+EVV MD
Sbjct: 239 GQMVVVGAPSTPLELPAYAIITGGKRVAGNGVGSVADCQAMLDFAGEHGVTADIEVVQMD 418
Query: 275 YVNTAIQRLERNDVRYRFVVDVAGSKI 195
YVNTAI+RLE+NDVRYRFV+DVAGSK+
Sbjct: 419 YVNTAIERLEKNDVRYRFVIDVAGSKM 499
Score = 102 bits (217), Expect(2) = 5e-031
Identities = 45/91 (49%), Positives = 61/91 (67%)
Frame = +3 / -2
Query: 195 NLAARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPG 374
+LAARDV++EA+P IV L LD +DVVH L++ GD +L+ +V+H LA+ D PG
Sbjct: 499 HLAARDVNDEAIPHIVLLEPLDRCVDVVHLHHLNVSGDAMLSCEVQHRLAVGDTPHAVPG 320
Query: 375 HALPAGDEAEGRHLERLGGQADDDHLAHRLE 467
H LPAGD+ R L+R +ADD HL H L+
Sbjct: 319 HPLPAGDDGVRRQLQRRAWRADDHHLPHGLQ 227
Score = 89.5 bits (189), Expect(2) = 1e-035
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +1 / -3
Query: 196 ILLPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
ILLPATS TKRYLTSF S R +AVLT*SI TTS SAV PCSPAKSS+AW S
Sbjct: 498 ILLPATSMTKRYLTSFFSSRSIAVLT*SICTTSMSAVTPCSPAKSSIAWQS 346
Score = 81.7 bits (172), Expect(2) = 1e-035
Identities = 39/77 (50%), Positives = 46/77 (59%)
Frame = +1 / -3
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRLTRNXXX 585
AG+ SG++G PTTTI P+G S +SSGT ADTVSM PS V AAA IC+ S LT+N
Sbjct: 288 AGSSSGVLGAPTTTICPMGFSSASSGTIWCPADTVSMMPSNVAAAAFICAASWLTKNASA 109
Query: 586 XXXXXXXXXXXXDVLMT 636
D LMT
Sbjct: 108 PRRPSASSRLPGDELMT 58
Score = 53.3 bits (110), Expect(2) = 5e-031
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = +3 / -2
Query: 519 AVQGARRRPHLLGVAADQERVGTEAAEGLVPLAQRRADD 635
AVQ R HL GV ADQERVG +A+E LV LA RRADD
Sbjct: 175 AVQRGRCCLHLRGVVADQERVGAKASERLVALAGRRADD 59
>gb|CD428180.1|CD428180 ETH1_28_C02.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_28_C02_A002 3', mRNA sequence
Length = 639
Score = 237 bits (512), Expect = 1e-061
Identities = 99/145 (68%), Positives = 118/145 (81%)
Frame = -2 / +2
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPM 456
VIS+S KR EA+ RLGAD FLVSRD EQM+AAAGT+DG+IDTVSA HP+VPLL LLKPM
Sbjct: 41 VISSSPAKRGEAIERLGADEFLVSRDTEQMKAAAGTMDGIIDTVSAGHPIVPLLALLKPM 220
Query: 455 GQMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMD 276
GQMV+VG P+ PL++PA+++ +CQAMLDFAG+HGITAD+E+V MD
Sbjct: 221 GQMVIVGAPSTPLELPAYAIITGGKRVAGNGVGSIADCQAMLDFAGQHGITADIELVRMD 400
Query: 275 YVNTAIQRLERNDVRYRFVVDVAGS 201
YVNTA++RLERNDVRYRFVVDVAGS
Sbjct: 401 YVNTAMERLERNDVRYRFVVDVAGS 475
Score = 107 bits (228), Expect(2) = 1e-031
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +3 / -3
Query: 204 ARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHAL 383
A D+++E VPD+VPL L G +DVVHP++L +RGD VL +V+H LA+ D PGH L
Sbjct: 472 ASDINDEPVPDVVPLQPLHGRVDVVHPNELDVRGDAVLPREVQHRLAVGDTPHSVPGHPL 293
Query: 384 PAGDEAEGRHLERLGGQADDDHLAHRLE 467
PA D+ R L+R +ADD HL H L+
Sbjct: 292 PARDDGVRRQLQRRAWRADDHHLPHGLQ 209
Score = 87.2 bits (184), Expect(2) = 2e-036
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = +1 / -1
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRLTRNXXX 585
AG+ SG++G PT TI P+G S +SSGT G ADTVSM PS VPAAA ICS SRLT+N
Sbjct: 270 AGSSSGVLGAPTITICPMGFSSASSGTIGCPADTVSMMPSIVPAAAFICSVSRLTKNSSA 91
Query: 586 XXXXXXXXXXXXDVLMT 636
D L+T
Sbjct: 90 PRRSMASPRLAGDELIT 40
Score = 86.8 bits (183), Expect(2) = 2e-036
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +1 / -1
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATSTT RYLTSFLS R MAVLT*SI T+S SAV+PC PAKSS+AW S
Sbjct: 474 LPATSTTNRYLTSFLSSRSMAVLT*SILTSSMSAVMPCCPAKSSIAWQS 328
Score = 50.1 bits (103), Expect(2) = 1e-031
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / -3
Query: 519 AVQGARRRPHLLGVAADQERVGTEAAEGLVPLAQRRAD 632
AV A RR HLLGVAADQE VG +A +GL L + RAD
Sbjct: 157 AVHRACRRLHLLGVAADQELVGAKALDGLSTLGRGRAD 44
>gb|CD462540.1|CD462540 ETH1_38_C08.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_38_C08_A002 3', mRNA sequence
Length = 715
Score = 237 bits (512), Expect = 1e-061
Identities = 99/145 (68%), Positives = 118/145 (81%)
Frame = -2 / +3
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPM 456
VIS+S KR EA+ RLGAD FLVSRD EQM+AAAGT+DG+IDTVSA HP+VPLL LLKPM
Sbjct: 129 VISSSPAKRGEAIERLGADEFLVSRDTEQMKAAAGTMDGIIDTVSAGHPIVPLLALLKPM 308
Query: 455 GQMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMD 276
GQMV+VG P+ PL++PA+++ +CQAMLDFAG+HGITAD+E+V MD
Sbjct: 309 GQMVIVGAPSTPLELPAYAIITGGKRVAGNGVGSIADCQAMLDFAGQHGITADIELVRMD 488
Query: 275 YVNTAIQRLERNDVRYRFVVDVAGS 201
YVNTA++RLERNDVRYRFVVDVAGS
Sbjct: 489 YVNTAMERLERNDVRYRFVVDVAGS 563
Score = 107 bits (228), Expect(2) = 1e-031
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +3 / -3
Query: 204 ARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHAL 383
A D+++E VPD+VPL L G +DVVHP++L +RGD VL +V+H LA+ D PGH L
Sbjct: 560 ASDINDEPVPDVVPLQPLHGRVDVVHPNELDVRGDAVLPREVQHRLAVGDTPHSVPGHPL 381
Query: 384 PAGDEAEGRHLERLGGQADDDHLAHRLE 467
PA D+ R L+R +ADD HL H L+
Sbjct: 380 PARDDGVRRQLQRRAWRADDHHLPHGLQ 297
Score = 87.2 bits (184), Expect(2) = 2e-036
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = +1 / -1
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRLTRNXXX 585
AG+ SG++G PT TI P+G S +SSGT G ADTVSM PS VPAAA ICS SRLT+N
Sbjct: 358 AGSSSGVLGAPTITICPMGFSSASSGTIGCPADTVSMMPSIVPAAAFICSVSRLTKNSSA 179
Query: 586 XXXXXXXXXXXXDVLMT 636
D L+T
Sbjct: 178 PRRSMASPRLAGDELIT 128
Score = 86.8 bits (183), Expect(2) = 2e-036
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +1 / -1
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATSTT RYLTSFLS R MAVLT*SI T+S SAV+PC PAKSS+AW S
Sbjct: 562 LPATSTTNRYLTSFLSSRSMAVLT*SILTSSMSAVMPCCPAKSSIAWQS 416
Score = 50.1 bits (103), Expect(2) = 1e-031
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / -3
Query: 519 AVQGARRRPHLLGVAADQERVGTEAAEGLVPLAQRRAD 632
AV A RR HLLGVAADQE VG +A +GL L + RAD
Sbjct: 245 AVHRACRRLHLLGVAADQELVGAKALDGLSTLGRGRAD 132
>gb|CX608350.1|CX608350 ANR1_38_C09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_38_C09_A002 3', mRNA sequence
Length = 598
Score = 237 bits (512), Expect = 1e-061
Identities = 99/145 (68%), Positives = 118/145 (81%)
Frame = -2 / +3
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPM 456
VIS+S KR EA+ RLGAD FLVSRD EQM+AAAGT+DG+IDTVSA HP+VPLL LLKPM
Sbjct: 15 VISSSPAKRGEAIERLGADEFLVSRDTEQMKAAAGTMDGIIDTVSAGHPIVPLLALLKPM 194
Query: 455 GQMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMD 276
GQMV+VG P+ PL++PA+++ +CQAMLDFAG+HGITAD+E+V MD
Sbjct: 195 GQMVIVGAPSTPLELPAYAIITGGKRVAGNGVGSIADCQAMLDFAGQHGITADIELVRMD 374
Query: 275 YVNTAIQRLERNDVRYRFVVDVAGS 201
YVNTA++RLERNDVRYRFVVDVAGS
Sbjct: 375 YVNTAMERLERNDVRYRFVVDVAGS 449
Score = 107 bits (228), Expect(2) = 1e-031
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +3 / -3
Query: 204 ARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHAL 383
A D+++E VPD+VPL L G +DVVHP++L +RGD VL +V+H LA+ D PGH L
Sbjct: 446 ASDINDEPVPDVVPLQPLHGRVDVVHPNELDVRGDAVLPREVQHRLAVGDTPHSVPGHPL 267
Query: 384 PAGDEAEGRHLERLGGQADDDHLAHRLE 467
PA D+ R L+R +ADD HL H L+
Sbjct: 266 PARDDGVRRQLQRRAWRADDHHLPHGLQ 183
Score = 87.2 bits (184), Expect(2) = 2e-036
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = +1 / -1
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRLTRNXXX 585
AG+ SG++G PT TI P+G S +SSGT G ADTVSM PS VPAAA ICS SRLT+N
Sbjct: 244 AGSSSGVLGAPTITICPMGFSSASSGTIGCPADTVSMMPSIVPAAAFICSVSRLTKNSSA 65
Query: 586 XXXXXXXXXXXXDVLMT 636
D L+T
Sbjct: 64 PRRSMASPRLAGDELIT 14
Score = 86.8 bits (183), Expect(2) = 2e-036
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +1 / -1
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATSTT RYLTSFLS R MAVLT*SI T+S SAV+PC PAKSS+AW S
Sbjct: 448 LPATSTTNRYLTSFLSSRSMAVLT*SILTSSMSAVMPCCPAKSSIAWQS 302
Score = 50.1 bits (103), Expect(2) = 1e-031
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / -3
Query: 519 AVQGARRRPHLLGVAADQERVGTEAAEGLVPLAQRRAD 632
AV A RR HLLGVAADQE VG +A +GL L + RAD
Sbjct: 131 AVHRACRRLHLLGVAADQELVGAKALDGLSTLGRGRAD 18
>gb|CX622493.1|CX622493 GABR1_64_G03.b2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_64_G03_A002 3', mRNA sequence
Length = 746
Score = 227 bits (491), Expect = 1e-058
Identities = 95/145 (65%), Positives = 117/145 (80%)
Frame = -2 / +1
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPM 456
VISTS KR EA+ LGAD FL+SRDPE+M+AA GT+DG+IDTVSA HP+ PLL LLKP+
Sbjct: 76 VISTSASKRQEAIESLGADEFLISRDPEEMKAATGTMDGIIDTVSAWHPITPLLALLKPL 255
Query: 455 GQMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMD 276
GQMVVVG P+KPL++PA+++ G+CQAML+FAG+HGI A+VEV+ MD
Sbjct: 256 GQMVVVGGPSKPLELPAYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIGAEVEVIKMD 435
Query: 275 YVNTAIQRLERNDVRYRFVVDVAGS 201
YVNTAI+RLE+NDVRYRFV+DVAGS
Sbjct: 436 YVNTAIERLEKNDVRYRFVIDVAGS 510
Score = 98.7 bits (209), Expect(2) = 1e-029
Identities = 45/89 (50%), Positives = 57/89 (64%)
Frame = +3 / -3
Query: 201 AARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHA 380
AA DVD+EAV ++V L LD +DVVH DD H+ D VL +++HGLA+PDAA P HA
Sbjct: 510 AAGDVDDEAVANVVLLEPLDRRVDVVHLDDFHLGADAVLPRELKHGLAVPDAADAVPSHA 331
Query: 381 LPAGDEAEGRHLERLGGQADDDHLAHRLE 467
LPA + R L RL + D HL RL+
Sbjct: 330 LPARHDGVRRQL*RLARPSHDHHLPQRLQ 244
Score = 86.3 bits (182), Expect(2) = 4e-032
Identities = 42/77 (54%), Positives = 46/77 (59%)
Frame = +1 / -1
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRLTRNXXX 585
AG+ SGL+G PTTTI P G S +SSG G ADTVSM PS VP AA I SGSRL +N
Sbjct: 305 AGSSSGLLGPPTTTICPNGFSSASSGVIGCHADTVSMMPSMVPVAAFISSGSRLIKNSSA 126
Query: 586 XXXXXXXXXXXXDVLMT 636
DVLMT
Sbjct: 125 PRLSIAS*RLLADVLMT 75
Score = 73.0 bits (153), Expect(2) = 4e-032
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = +1 / -1
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATS TKR TSF S R +AVLT*SI TSTSA +PC PA SSMAW S
Sbjct: 509 LPATSMTKR*RTSFFSSRSIAVLT*SILMTSTSAPMPCFPANSSMAWQS 363
Score = 51.9 bits (107), Expect(2) = 1e-029
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = +3 / -3
Query: 519 AVQGARRRPHLLGVAADQERVGTEAAEGLVPLAQRRADD 635
AV GARRR HLL V ADQE V EA + L+ LA+ RADD
Sbjct: 192 AVHGARRRLHLLRVPADQELVRAEALDRLLTLARGRADD 76
>gb|CW027561.1|CW027561 104_254_10498588_116_30396 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10498588, DNA
sequence
Length = 820
Score = 191 bits (411), Expect(2) = 1e-058
Identities = 78/117 (66%), Positives = 94/117 (80%)
Frame = -2 / -3
Query: 545 RAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXXXXXXXXXX 366
+AAA TLDG+IDTVSA H +VPLL LLKPMGQMVVVG P+ PL++PA+++
Sbjct: 557 QAAAATLDGIIDTVSAGHQIVPLLALLKPMGQMVVVGAPSTPLELPAYAIITGGKRVAGN 378
Query: 365 XXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAGSKI 195
+CQAMLDFAGEHG+TAD+EVV MDYVNTAI+RLE+NDVRYRFV+DVAGSK+
Sbjct: 377 GVGSVADCQAMLDFAGEHGVTADIEVVQMDYVNTAIERLEKNDVRYRFVIDVAGSKM 207
Score = 102 bits (217), Expect = 6e-021
Identities = 45/91 (49%), Positives = 61/91 (67%)
Frame = +3 / +3
Query: 195 NLAARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPG 374
+LAARDV++EA+P IV L LD +DVVH L++ GD +L+ +V+H LA+ D PG
Sbjct: 207 HLAARDVNDEAIPHIVLLEPLDRCVDVVHLHHLNVSGDAMLSCEVQHRLAVGDTPHAVPG 386
Query: 375 HALPAGDEAEGRHLERLGGQADDDHLAHRLE 467
H LPAGD+ R L+R +ADD HL H L+
Sbjct: 387 HPLPAGDDGVRRQLQRRAWRADDHHLPHGLQ 479
Score = 89.5 bits (189), Expect(3) = 4e-039
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +1 / +1
Query: 196 ILLPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
ILLPATS TKRYLTSF S R +AVLT*SI TTS SAV PCSPAKSS+AW S
Sbjct: 208 ILLPATSMTKRYLTSFFSSRSIAVLT*SICTTSMSAVTPCSPAKSSIAWQS 360
Score = 63.8 bits (133), Expect(3) = 4e-039
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = +1 / +1
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAA 543
AG+ SG++G PTTTI P+G S +SSGT ADTVSM PS V AAA
Sbjct: 418 AGSSSGVLGAPTTTICPMGFSSASSGTIWCPADTVSMMPSNVAAAA 555
Score = 58.8 bits (122), Expect(2) = 1e-058
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = -2 / -3
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTL 525
VIS+S GKRDEALGRLGADAFLVS D QM+ +L
Sbjct: 806 VISSSPGKRDEALGRLGADAFLVSHDAAQMKVTKASL 696
Score = 50.6 bits (104), Expect(3) = 4e-039
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = +3 / +3
Query: 546 HLLGVAADQERVGTEAAEGLVPLAQRRADD 635
HL GV ADQERVG +A+E LV LA RRADD
Sbjct: 717 HLRGVVADQERVGAQASERLVALAGRRADD 806
>gb|CF431001.1|CF431001 NIT1_4_D08.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_4_D08_A002 3', mRNA sequence
Length = 580
Score = 226 bits (489), Expect = 2e-058
Identities = 93/135 (68%), Positives = 111/135 (82%)
Frame = -2 / +3
Query: 605 EALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPT 426
EA+ RLGAD FLVSRD EQM+AAAGT+DG+IDTVSA HP+VPLL LLKPMGQMV+VG P+
Sbjct: 3 EAIERLGADEFLVSRDTEQMKAAAGTMDGIIDTVSAGHPIVPLLALLKPMGQMVIVGAPS 182
Query: 425 KPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLE 246
PL++PA+++ +CQAMLDFAG+HGITAD+E+V MDYVNTA++RLE
Sbjct: 183 TPLELPAYAIITGGKRVAGNGVGSIADCQAMLDFAGQHGITADIELVRMDYVNTAMERLE 362
Query: 245 RNDVRYRFVVDVAGS 201
RNDVRYRFVVDVAGS
Sbjct: 363 RNDVRYRFVVDVAGS 407
Score = 107 bits (228), Expect(2) = 2e-029
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +3 / -3
Query: 204 ARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHAL 383
A D+++E VPD+VPL L G +DVVHP++L +RGD VL +V+H LA+ D PGH L
Sbjct: 404 ASDINDEPVPDVVPLQPLHGRVDVVHPNELDVRGDAVLPREVQHRLAVGDTPHSVPGHPL 225
Query: 384 PAGDEAEGRHLERLGGQADDDHLAHRLE 467
PA D+ R L+R +ADD HL H L+
Sbjct: 224 PARDDGVRRQLQRRAWRADDHHLPHGLQ 141
Score = 86.8 bits (183), Expect(2) = 6e-036
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +1 / -1
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATSTT RYLTSFLS R MAVLT*SI T+S SAV+PC PAKSS+AW S
Sbjct: 406 LPATSTTNRYLTSFLSSRSMAVLT*SILTSSMSAVMPCCPAKSSIAWQS 260
Score = 85.4 bits (180), Expect(2) = 6e-036
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = +1 / -1
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRLTRN 576
AG+ SG++G PT TI P+G S +SSGT G ADTVSM PS VPAAA ICS SRLT+N
Sbjct: 202 AGSSSGVLGAPTITICPMGFSSASSGTIGCPADTVSMMPSIVPAAAFICSVSRLTKN 32
Score = 43.2 bits (88), Expect(2) = 2e-029
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +3 / -3
Query: 519 AVQGARRRPHLLGVAADQERVGTEAAEGL 605
AV A RR HLLGVAADQE VG +A +GL
Sbjct: 89 AVHRACRRLHLLGVAADQELVGAKALDGL 3
>gb|CN134387.1|CN134387 OX1_26_C04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_C04_A002 3', mRNA sequence
Length = 745
Score = 191 bits (412), Expect(2) = 1e-057
Identities = 77/115 (66%), Positives = 94/115 (81%)
Frame = -2 / +2
Query: 545 RAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXXXXXXXXXX 366
+AAAGT+DG+IDTVSA HP+VPLL LLKPMGQMV+VG P+ PL++PA+++
Sbjct: 239 QAAAGTMDGIIDTVSAGHPIVPLLALLKPMGQMVIVGAPSTPLELPAYAIITGGKRVAGN 418
Query: 365 XXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAGS 201
+CQAMLDFAG+HGITAD+E+V MDYVNTA++RLERNDVRYRFVVDVAGS
Sbjct: 419 GVGSIADCQAMLDFAGQHGITADIELVRMDYVNTAMERLERNDVRYRFVVDVAGS 583
Score = 106 bits (227), Expect(2) = 6e-024
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +3 / -1
Query: 204 ARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHAL 383
A D+++E VPD+VPL L G +DVVHP++L +RGD VL +V+H LA+ D PGH L
Sbjct: 580 AGDINDEPVPDVVPLQPLHGRVDVVHPNELDVRGDAVLPREVQHRLAVGDTPHSVPGHPL 401
Query: 384 PAGDEAEGRHLERLGGQADDDHLAHRLE 467
PA D+ R L+R +ADD HL H L+
Sbjct: 400 PARDDGVRRQLQRRAWRADDHHLPHGLQ 317
Score = 86.8 bits (183), Expect(3) = 2e-038
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +1 / -2
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATSTT RYLTSFLS R MAVLT*SI T+S SAV+PC PAKSS+AW S
Sbjct: 582 LPATSTTNRYLTSFLSSRSMAVLT*SILTSSMSAVMPCCPAKSSIAWQS 436
Score = 68.0 bits (142), Expect(3) = 2e-038
Identities = 30/48 (62%), Positives = 36/48 (75%)
Frame = +1 / -2
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALI 549
AG+ SG++G PT TI P+G S +SSGT G ADTVSM PS VPAAA +
Sbjct: 378 AGSSSGVLGAPTITICPMGFSSASSGTIGCPADTVSMMPSIVPAAACV 235
Score = 53.3 bits (110), Expect(2) = 1e-057
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = -2 / +3
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGT 528
VIS+S KR EA+ RLGAD FLVSRD EQM+A A +
Sbjct: 39 VISSSPAKRGEAIERLGADEFLVSRDTEQMKATAAS 146
Score = 43.7 bits (89), Expect(3) = 2e-038
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3 / -3
Query: 546 HLLGVAADQERVGTEAAEGLVPLAQRRAD 632
HLLGVAADQE VG +A +GL L + RAD
Sbjct: 128 HLLGVAADQELVGAKALDGLSTLGRGRAD 42
Score = 26.7 bits (52), Expect(2) = 6e-024
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1 / -1
Query: 535 AAALICSGSRLTRNXXXXXXXXXXXXXXXDVLMT 636
A A ICS SRLT+N D L+T
Sbjct: 139 AVAFICSVSRLTKNSSAPRRSMASPRLAGDELIT 38
>gb|BF587706.1|BF587706 FM1_39_F09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 614
Score = 224 bits (483), Expect = 1e-057
Identities = 92/144 (63%), Positives = 116/144 (80%)
Frame = -2 / +2
Query: 632 ISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMG 453
ISTS KR EA+ LGAD FL+SRDPE+M+AA GT+DG+IDTVSA HP+ PLL LLKP+G
Sbjct: 2 ISTSASKRQEAIESLGADEFLISRDPEEMKAATGTMDGIIDTVSAWHPITPLLALLKPLG 181
Query: 452 QMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMDY 273
QMV+VG P+KPL++PA+++ G+CQAML+FAG+HGI A+VEV+ MDY
Sbjct: 182 QMVIVGGPSKPLELPAYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIGAEVEVIKMDY 361
Query: 272 VNTAIQRLERNDVRYRFVVDVAGS 201
VNTA++RLE+NDVRYRFV+DVAGS
Sbjct: 362 VNTAMERLEKNDVRYRFVIDVAGS 433
Score = 99.1 bits (210), Expect(2) = 7e-029
Identities = 45/89 (50%), Positives = 57/89 (64%)
Frame = +3 / -2
Query: 201 AARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHA 380
AA DVD+EAV D++ L L +DVVH DDLH+ D VL +++HGLA+PDAA P HA
Sbjct: 433 AAGDVDDEAVADVILLEPLHRRVDVVHLDDLHLGADAVLPRELKHGLAVPDAADAVPSHA 254
Query: 381 LPAGDEAEGRHLERLGGQADDDHLAHRLE 467
LPA + R L RL + D HL RL+
Sbjct: 253 LPARHDGVRRQL*RLARPSHDHHLPQRLQ 167
Score = 81.3 bits (171), Expect(2) = 1e-030
Identities = 40/76 (52%), Positives = 44/76 (57%)
Frame = +1 / -3
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRLTRNXXX 585
AG+ SGL+G PT TI P G S +SSG G ADTVSM PS VP AA I SGSRL +N
Sbjct: 228 AGSSSGLLGPPTITICPNGFSSASSGVIGCHADTVSMMPSMVPVAAFISSGSRLIKNSSA 49
Query: 586 XXXXXXXXXXXXDVLM 633
DVLM
Sbjct: 48 PRLSIAS*RLLADVLM 1
Score = 73.0 bits (153), Expect(2) = 1e-030
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = +1 / -3
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATS TKR TSF S R +AVLT*SI TSTSA +PC PA SSMAW S
Sbjct: 432 LPATSMTKR*RTSFFSSRSIAVLT*SILMTSTSAPMPCFPANSSMAWQS 286
Score = 49.2 bits (101), Expect(2) = 7e-029
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / -2
Query: 519 AVQGARRRPHLLGVAADQERVGTEAAEGLVPLAQRRAD 632
AV GARRR HLL V ADQE V EA + L+ LA+ RAD
Sbjct: 115 AVHGARRRLHLLRVPADQELVRAEALDRLLTLARGRAD 2
>gb|CX622436.1|CX622436 GABR1_64_A04.b2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_64_A04_A002 3', mRNA sequence
Length = 651
Score = 222 bits (479), Expect = 4e-057
Identities = 92/143 (64%), Positives = 115/143 (80%)
Frame = -2 / +2
Query: 629 STSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQ 450
STS KR EA+ LGAD FL+SRDPE+M+AA GT+DG+IDTVSA HP+ PLL LLKP+GQ
Sbjct: 2 STSASKRQEAIESLGADEFLISRDPEEMKAATGTMDGIIDTVSAWHPITPLLALLKPLGQ 181
Query: 449 MVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMDYV 270
MVVVG P+KPL++PA+++ G+CQAML+FAG+HGI A+VEV+ MDY+
Sbjct: 182 MVVVGGPSKPLELPAYAIVPGGKGVAGNSVGNVGDCQAMLEFAGKHGIGAEVEVIKMDYL 361
Query: 269 NTAIQRLERNDVRYRFVVDVAGS 201
NTAI+RLE+NDVRYRFV+DVAGS
Sbjct: 362 NTAIERLEKNDVRYRFVIDVAGS 430
Score = 98.2 bits (208), Expect(2) = 9e-028
Identities = 44/89 (49%), Positives = 57/89 (64%)
Frame = +3 / -3
Query: 201 AARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHA 380
AA DVD+EAV ++V L LD ++VVH DD H+ D VL +++HGLA+PD A P HA
Sbjct: 430 AAGDVDDEAVANVVLLEPLDRRVEVVHLDDFHLGADAVLPRELKHGLAVPDVADAVPSHA 251
Query: 381 LPAGDEAEGRHLERLGGQADDDHLAHRLE 467
LPA D+ R L RL + D HL RL+
Sbjct: 250 LPARDDGVRRQL*RLARPSHDHHLPQRLQ 164
Score = 81.7 bits (172), Expect(2) = 6e-030
Identities = 40/75 (53%), Positives = 44/75 (58%)
Frame = +1 / -1
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRLTRNXXX 585
AG+ SGL+G PTTTI P G S +SSG G ADTVSM PS VP AA I SGSRL +N
Sbjct: 225 AGSSSGLLGPPTTTICPNGFSSASSGVIGCHADTVSMMPSMVPVAAFISSGSRLIKNSSA 46
Query: 586 XXXXXXXXXXXXDVL 630
DVL
Sbjct: 45 PRLSIAS*RLLADVL 1
Score = 70.3 bits (147), Expect(2) = 6e-030
Identities = 34/49 (69%), Positives = 36/49 (73%)
Frame = +1 / -1
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATS TKR TSF S R +AVL *SI TSTSA +PC PA SSMAW S
Sbjct: 429 LPATSMTKR*RTSFFSSRSIAVLR*SILMTSTSAPMPCFPANSSMAWQS 283
Score = 46.4 bits (95), Expect(2) = 9e-028
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = +3 / -3
Query: 519 AVQGARRRPHLLGVAADQERVGTEAAEGLVPLAQRRA 629
AV GARRR HLL V ADQE V EA + L+ LA+ RA
Sbjct: 112 AVHGARRRLHLLRVPADQELVRAEALDRLLTLARGRA 2
>gb|BG159378.1|BG159378 OV2_7_A11.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 591
Score = 216 bits (466), Expect = 3e-055
Identities = 89/137 (64%), Positives = 111/137 (81%)
Frame = -2 / +1
Query: 611 RDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGL 432
R EA+ LGAD FL+SRDPE+M+AA GT+DG+IDTVSA HP+ PLL LLKP+GQMVVVG
Sbjct: 1 RQEAIESLGADEFLISRDPEEMKAATGTMDGIIDTVSAWHPITPLLALLKPLGQMVVVGG 180
Query: 431 PTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQR 252
P+KPL++PA+++ G+CQAML+FAG+HGI A+VEV+ MDYVNTAI+R
Sbjct: 181 PSKPLELPAYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIGAEVEVIKMDYVNTAIER 360
Query: 251 LERNDVRYRFVVDVAGS 201
LE+NDVRYRFV+DVAGS
Sbjct: 361 LEKNDVRYRFVIDVAGS 411
Score = 98.7 bits (209), Expect(2) = 7e-026
Identities = 45/89 (50%), Positives = 57/89 (64%)
Frame = +3 / -1
Query: 201 AARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHA 380
AA DVD+EAV ++V L LD +DVVH DD H+ D VL +++HGLA+PDAA P HA
Sbjct: 411 AAGDVDDEAVANVVLLEPLDRRVDVVHLDDFHLGADAVLPRELKHGLAVPDAADAVPSHA 232
Query: 381 LPAGDEAEGRHLERLGGQADDDHLAHRLE 467
LPA + R L RL + D HL RL+
Sbjct: 231 LPARHDGVRRQL*RLARPSHDHHLPQRLQ 145
Score = 80.8 bits (170), Expect(2) = 2e-030
Identities = 37/57 (64%), Positives = 41/57 (71%)
Frame = +1 / -2
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRLTRN 576
AG+ SGL+G PTTTI P G S +SSG G ADTVSM PS VP AA I SGSRL +N
Sbjct: 206 AGSSSGLLGPPTTTICPNGFSSASSGVIGCHADTVSMMPSMVPVAAFISSGSRLIKN 36
Score = 73.0 bits (153), Expect(2) = 2e-030
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = +1 / -2
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATS TKR TSF S R +AVLT*SI TSTSA +PC PA SSMAW S
Sbjct: 410 LPATSMTKR*RTSFFSSRSIAVLT*SILMTSTSAPMPCFPANSSMAWQS 264
Score = 39.6 bits (80), Expect(2) = 7e-026
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +3 / -1
Query: 519 AVQGARRRPHLLGVAADQERVGTEAAEGLV 608
AV GARRR HLL V ADQE V EA + L+
Sbjct: 93 AVHGARRRLHLLRVPADQELVRAEALDRLL 4
>gb|CN143114.1|CN143114 WOUND1_14_E12.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_14_E12_A002 3', mRNA sequence
Length = 638
Score = 212 bits (458), Expect = 3e-054
Identities = 87/135 (64%), Positives = 110/135 (81%)
Frame = -2 / +1
Query: 605 EALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPT 426
EA+ LGAD FL+SRDPE+M+AA GT+DG+IDTVSA HP+ PLL LLKP+GQMVVVG P+
Sbjct: 4 EAIESLGADEFLISRDPEEMKAATGTMDGIIDTVSAWHPITPLLALLKPLGQMVVVGGPS 183
Query: 425 KPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLE 246
KPL++P++++ G+CQAML+FAG+HGI A+VEV+ MDYVNTAI+RLE
Sbjct: 184 KPLELPSYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIGAEVEVIKMDYVNTAIERLE 363
Query: 245 RNDVRYRFVVDVAGS 201
+NDVRYRFV+DVAGS
Sbjct: 364 KNDVRYRFVIDVAGS 408
Score = 98.7 bits (209), Expect(2) = 7e-026
Identities = 45/89 (50%), Positives = 57/89 (64%)
Frame = +3 / -3
Query: 201 AARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHA 380
AA DVD+EAV ++V L LD +DVVH DD H+ D VL +++HGLA+PDAA P HA
Sbjct: 408 AAGDVDDEAVANVVLLEPLDRRVDVVHLDDFHLGADAVLPRELKHGLAVPDAADAVPSHA 229
Query: 381 LPAGDEAEGRHLERLGGQADDDHLAHRLE 467
LPA + R L RL + D HL RL+
Sbjct: 228 LPARHDGVRRQL*RLARPSHDHHLPQRLQ 142
Score = 79.0 bits (166), Expect(2) = 6e-030
Identities = 36/56 (64%), Positives = 40/56 (71%)
Frame = +1 / -1
Query: 409 GTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRLTRN 576
G+ SGL+G PTTTI P G S +SSG G ADTVSM PS VP AA I SGSRL +N
Sbjct: 200 GSSSGLLGPPTTTICPNGFSSASSGVIGCHADTVSMMPSMVPVAAFISSGSRLIKN 33
Score = 73.0 bits (153), Expect(2) = 6e-030
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = +1 / -1
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATS TKR TSF S R +AVLT*SI TSTSA +PC PA SSMAW S
Sbjct: 407 LPATSMTKR*RTSFFSSRSIAVLT*SILMTSTSAPMPCFPANSSMAWQS 261
Score = 39.6 bits (80), Expect(2) = 7e-026
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +3 / -3
Query: 519 AVQGARRRPHLLGVAADQERVGTEAAEGLV 608
AV GARRR HLL V ADQE V EA + L+
Sbjct: 90 AVHGARRRLHLLRVPADQELVRAEALDRLL 1
>gb|CF432804.1|CF432804 NIT1_19_E10.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_19_E10_A002 3', mRNA sequence
Length = 538
Score = 207 bits (446), Expect = 2e-052
Identities = 84/123 (68%), Positives = 101/123 (82%)
Frame = -2 / +3
Query: 569 VSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXX 390
VSRD EQM+AAAGT+DG+IDTVSA HP+VPLL LLKPMGQMV+VG P+ PL++PA+++
Sbjct: 3 VSRDTEQMKAAAGTMDGIIDTVSAGHPIVPLLALLKPMGQMVIVGAPSTPLELPAYAIIT 182
Query: 389 XXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDV 210
+CQAMLDFAG+HGITAD+E+V MDYVNTA++RLERNDVRYRFVVDV
Sbjct: 183 GGKRVAGNGVGSIADCQAMLDFAGQHGITADIELVRMDYVNTAMERLERNDVRYRFVVDV 362
Query: 209 AGS 201
AGS
Sbjct: 363 AGS 371
Score = 107 bits (228), Expect(2) = 6e-025
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +3 / -3
Query: 204 ARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHAL 383
A D+++E VPD+VPL L G +DVVHP++L +RGD VL +V+H LA+ D PGH L
Sbjct: 368 ASDINDEPVPDVVPLQPLHGRVDVVHPNELDVRGDAVLPREVQHRLAVGDTPHSVPGHPL 189
Query: 384 PAGDEAEGRHLERLGGQADDDHLAHRLE 467
PA D+ R L+R +ADD HL H L+
Sbjct: 188 PARDDGVRRQLQRRAWRADDHHLPHGLQ 105
Score = 86.8 bits (183), Expect(2) = 7e-035
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +1 / -1
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATSTT RYLTSFLS R MAVLT*SI T+S SAV+PC PAKSS+AW S
Sbjct: 370 LPATSTTNRYLTSFLSSRSMAVLT*SILTSSMSAVMPCCPAKSSIAWQS 224
Score = 81.7 bits (172), Expect(2) = 7e-035
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = +1 / -1
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRLT 570
AG+ SG++G PT TI P+G S +SSGT G ADTVSM PS VPAAA ICS SRLT
Sbjct: 166 AGSSSGVLGAPTITICPMGFSSASSGTIGCPADTVSMMPSIVPAAAFICSVSRLT 2
Score = 27.6 bits (54), Expect(2) = 6e-025
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3 / -3
Query: 519 AVQGARRRPHLLGVAAD 569
AV A RR HLLGVAAD
Sbjct: 53 AVHRACRRLHLLGVAAD 3
>gb|CW465934.1|CW465934 fsbb001f216o21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f216o21, DNA
sequence
Length = 581
Score = 191 bits (412), Expect(2) = 4e-052
Identities = 77/115 (66%), Positives = 94/115 (81%)
Frame = -2 / -2
Query: 545 RAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXXXXXXXXXX 366
+AAAGT+DG+IDTVSA HP+VPLL LLKPMGQMV+VG P+ PL++PA+++
Sbjct: 427 QAAAGTMDGIIDTVSAGHPIVPLLALLKPMGQMVIVGAPSTPLELPAYAIITGGKRVAGN 248
Query: 365 XXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAGS 201
+CQAMLDFAG+HGITAD+E+V MDYVNTA++RLERNDVRYRFVVDVAGS
Sbjct: 247 GVGSIADCQAMLDFAGQHGITADIELVRMDYVNTAMERLERNDVRYRFVVDVAGS 83
Score = 107 bits (228), Expect(2) = 1e-023
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +3 / +2
Query: 204 ARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHAL 383
A D+++E VPD+VPL L G +DVVHP++L +RGD VL +V+H LA+ D PGH L
Sbjct: 86 ASDINDEPVPDVVPLQPLHGRVDVVHPNELDVRGDAVLPREVQHRLAVGDTPHSVPGHPL 265
Query: 384 PAGDEAEGRHLERLGGQADDDHLAHRLE 467
PA D+ R L+R +ADD HL H L+
Sbjct: 266 PARDDGVRRQLQRRAWRADDHHLPHGLQ 349
Score = 86.8 bits (183), Expect(3) = 2e-033
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +1 / +3
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATSTT RYLTSFLS R MAVLT*SI T+S SAV+PC PAKSS+AW S
Sbjct: 84 LPATSTTNRYLTSFLSSRSMAVLT*SILTSSMSAVMPCCPAKSSIAWQS 230
Score = 68.0 bits (142), Expect(3) = 2e-033
Identities = 30/48 (62%), Positives = 36/48 (75%)
Frame = +1 / +3
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALI 549
AG+ SG++G PT TI P+G S +SSGT G ADTVSM PS VPAAA +
Sbjct: 288 AGSSSGVLGAPTITICPMGFSSASSGTIGCPADTVSMMPSIVPAAACV 431
Score = 34.5 bits (69), Expect(2) = 4e-052
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2 / -3
Query: 587 GADAFLVSRDPEQMRAAAGT 528
GAD FLVSRD EQM+A A +
Sbjct: 579 GADEFLVSRDTEQMKATAAS 520
Score = 26.7 bits (52), Expect(3) = 2e-033
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 546 HLLGVAADQERV 581
HLLGVAADQE V
Sbjct: 538 HLLGVAADQELV 573
Score = 24.9 bits (48), Expect(2) = 1e-023
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1 / +2
Query: 535 AAALICSGSRLTRN 576
A A ICS SRLT+N
Sbjct: 527 AVAFICSVSRLTKN 568
>gb|CF430956.1|CF430956 NIT1_4_F06.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_4_F06_A002 3', mRNA sequence
Length = 540
Score = 204 bits (439), Expect = 1e-051
Identities = 83/123 (67%), Positives = 100/123 (81%)
Frame = -2 / +1
Query: 569 VSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXX 390
VSRD QM+AAAGT+DG+IDTVSA HP+VPLL LLKPMGQMV+VG P+ PL++PA+++
Sbjct: 1 VSRDTGQMKAAAGTMDGIIDTVSAGHPIVPLLALLKPMGQMVIVGAPSTPLELPAYAIIT 180
Query: 389 XXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDV 210
+CQAMLDFAG+HGITAD+E+V MDYVNTA++RLERNDVRYRFVVDV
Sbjct: 181 GGKRVAGNGVGSIADCQAMLDFAGQHGITADIELVRMDYVNTAMERLERNDVRYRFVVDV 360
Query: 209 AGS 201
AGS
Sbjct: 361 AGS 369
Score = 107 bits (228), Expect = 2e-022
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +3 / -1
Query: 204 ARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHAL 383
A D+++E VPD+VPL L G +DVVHP++L +RGD VL +V+H LA+ D PGH L
Sbjct: 366 ASDINDEPVPDVVPLQPLHGRVDVVHPNELDVRGDAVLPREVQHRLAVGDTPHSVPGHPL 187
Query: 384 PAGDEAEGRHLERLGGQADDDHLAHRLE 467
PA D+ R L+R +ADD HL H L+
Sbjct: 186 PARDDGVRRQLQRRAWRADDHHLPHGLQ 103
Score = 86.8 bits (183), Expect(2) = 2e-033
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +1 / -2
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATSTT RYLTSFLS R MAVLT*SI T+S SAV+PC PAKSS+AW S
Sbjct: 368 LPATSTTNRYLTSFLSSRSMAVLT*SILTSSMSAVMPCCPAKSSIAWQS 222
Score = 77.1 bits (162), Expect(2) = 2e-033
Identities = 35/54 (64%), Positives = 40/54 (74%)
Frame = +1 / -2
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRL 567
AG+ SG++G PT TI P+G S +SSGT G ADTVSM PS VPAAA IC SRL
Sbjct: 164 AGSSSGVLGAPTITICPMGFSSASSGTIGCPADTVSMMPSIVPAAAFICPVSRL 3
>gb|CN148699.1|CN148699 WOUND1_58_F02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_58_F02_A002 3', mRNA sequence
Length = 687
Score = 202 bits (435), Expect = 5e-051
Identities = 83/131 (63%), Positives = 105/131 (80%)
Frame = -2 / +3
Query: 593 RLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQ 414
R G + FL+SRDPE+M+AA GT+DG+IDTV A HP+ PLL LLKP+GQMVVVG P+KPL+
Sbjct: 24 RHGLNEFLISRDPEEMKAATGTMDGIIDTVLAWHPITPLLALLKPLGQMVVVGGPSKPLE 203
Query: 413 VPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDV 234
+PA+++ G+CQAML+FAG+HGI A+VEV+ MDYVNTAI+RLE+NDV
Sbjct: 204 LPAYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIGAEVEVIKMDYVNTAIERLEKNDV 383
Query: 233 RYRFVVDVAGS 201
RYRFV+DVAGS
Sbjct: 384 RYRFVIDVAGS 416
Score = 96.4 bits (204), Expect(2) = 1e-024
Identities = 44/89 (49%), Positives = 57/89 (64%)
Frame = +3 / -2
Query: 201 AARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHA 380
AA DV++EAV ++V L LD +DVVH DD H+ D VL +++HGLA+PDAA P HA
Sbjct: 416 AAGDVNDEAVANVVLLEPLDRRVDVVHLDDFHLGADAVLPRELKHGLAVPDAADAVPSHA 237
Query: 381 LPAGDEAEGRHLERLGGQADDDHLAHRLE 467
LPA + R L RL + D HL RL+
Sbjct: 236 LPARHDGVRRQL*RLARPSHDHHLPQRLQ 150
Score = 78.5 bits (165), Expect(2) = 8e-030
Identities = 36/57 (63%), Positives = 41/57 (71%)
Frame = +1 / -3
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRLTRN 576
AG+ SGL+G PTTTI P G S +SSG G A+TVSM PS VP AA I SGSRL +N
Sbjct: 211 AGSSSGLLGPPTTTICPNGFSSASSGVIGCHANTVSMMPSMVPVAAFISSGSRLIKN 41
Score = 73.0 bits (153), Expect(2) = 8e-030
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = +1 / -3
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATS TKR TSF S R +AVLT*SI TSTSA +PC PA SSMAW S
Sbjct: 415 LPATSMTKR*RTSFFSSRSIAVLT*SILMTSTSAPMPCFPANSSMAWQS 269
Score = 37.7 bits (76), Expect(2) = 1e-024
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = +3 / -2
Query: 519 AVQGARRRPHLLGVAADQERVGTEAAEGLV 608
AV GARRR HLL V ADQE V A G V
Sbjct: 98 AVHGARRRLHLLRVPADQELVEAVAHHGAV 9
>gb|CN131793.1|CN131793 OX1_2_G05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_2_G05_A002 3', mRNA sequence
Length = 576
Score = 196 bits (422), Expect = 3e-049
Identities = 80/119 (67%), Positives = 96/119 (80%)
Frame = -2 / +2
Query: 551 QMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXXXXXXXX 372
QM+AAA TLDG+IDTVSA H +VPLL LLKPMGQMVVVG P+ PL++PA+++
Sbjct: 5 QMKAAAATLDGIIDTVSAGHQIVPLLALLKPMGQMVVVGAPSTPLELPAYAIITGGKRVA 184
Query: 371 XXXXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAGSKI 195
+CQAMLDFAGEHG+TAD+EVV MDYVNTAI+RLE+NDVRYRFV+DVAGSK+
Sbjct: 185 GNGVGSVADCQAMLDFAGEHGVTADIEVVQMDYVNTAIERLEKNDVRYRFVIDVAGSKM 361
Score = 102 bits (217), Expect = 6e-021
Identities = 45/91 (49%), Positives = 61/91 (67%)
Frame = +3 / -3
Query: 195 NLAARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPG 374
+LAARDV++EA+P IV L LD +DVVH L++ GD +L+ +V+H LA+ D PG
Sbjct: 361 HLAARDVNDEAIPHIVLLEPLDRCVDVVHLHHLNVSGDAMLSCEVQHRLAVGDTPHAVPG 182
Query: 375 HALPAGDEAEGRHLERLGGQADDDHLAHRLE 467
H LPAGD+ R L+R +ADD HL H L+
Sbjct: 181 HPLPAGDDGVRRQLQRRAWRADDHHLPHGLQ 89
Score = 89.5 bits (189), Expect(2) = 3e-032
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +1 / -1
Query: 196 ILLPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
ILLPATS TKRYLTSF S R +AVLT*SI TTS SAV PCSPAKSS+AW S
Sbjct: 360 ILLPATSMTKRYLTSFFSSRSIAVLT*SICTTSMSAVTPCSPAKSSIAWQS 208
Score = 70.3 bits (147), Expect(2) = 3e-032
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = +1 / -1
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICS 555
AG+ SG++G PTTTI P+G S +SSGT ADTVSM PS V AAA IC+
Sbjct: 150 AGSSSGVLGAPTTTICPMGFSSASSGTIWCPADTVSMMPSNVAAAAFICA 1
>gb|CW122627.1|CW122627 104_501_11110773_116_34677_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11110773, DNA
sequence
Length = 621
Score = 191 bits (412), Expect(2) = 3e-049
Identities = 77/115 (66%), Positives = 94/115 (81%)
Frame = -2 / -3
Query: 545 RAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXXXXXXXXXX 366
+AAAGT+DG+IDTVSA HP+VPLL LLKPMGQMV+VG P+ PL++PA+++
Sbjct: 448 QAAAGTMDGIIDTVSAGHPIVPLLALLKPMGQMVIVGAPSTPLELPAYAIITGGKRVAGN 269
Query: 365 XXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAGS 201
+CQAMLDFAG+HGITAD+E+V MDYVNTA++RLERNDVRYRFVVDVAGS
Sbjct: 268 GVGSIADCQAMLDFAGQHGITADIELVRMDYVNTAMERLERNDVRYRFVVDVAGS 104
Score = 107 bits (228), Expect(2) = 1e-022
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +3 / +2
Query: 204 ARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHAL 383
A D+++E VPD+VPL L G +DVVHP++L +RGD VL +V+H LA+ D PGH L
Sbjct: 107 ASDINDEPVPDVVPLQPLHGRVDVVHPNELDVRGDAVLPREVQHRLAVGDTPHSVPGHPL 286
Query: 384 PAGDEAEGRHLERLGGQADDDHLAHRLE 467
PA D+ R L+R +ADD HL H L+
Sbjct: 287 PARDDGVRRQLQRRAWRADDHHLPHGLQ 370
Score = 86.8 bits (183), Expect(3) = 2e-032
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +1 / +3
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATSTT RYLTSFLS R MAVLT*SI T+S SAV+PC PAKSS+AW S
Sbjct: 105 LPATSTTNRYLTSFLSSRSMAVLT*SILTSSMSAVMPCCPAKSSIAWQS 251
Score = 68.0 bits (142), Expect(3) = 2e-032
Identities = 30/48 (62%), Positives = 36/48 (75%)
Frame = +1 / +3
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALI 549
AG+ SG++G PT TI P+G S +SSGT G ADTVSM PS VPAAA +
Sbjct: 309 AGSSSGVLGAPTITICPMGFSSASSGTIGCPADTVSMMPSIVPAAACV 452
Score = 24.9 bits (48), Expect(2) = 3e-049
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 572 LVSRDPEQMRAAAGT 528
LVSRD EQM+A A +
Sbjct: 585 LVSRDTEQMKATAAS 541
Score = 23.5 bits (45), Expect(3) = 2e-032
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / +2
Query: 535 AAALICSGSRLTR 573
A A ICS SRLTR
Sbjct: 548 AVAFICSVSRLTR 586
Score = 21.7 bits (41), Expect(2) = 1e-022
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3 / +1
Query: 546 HLLGVAADQ 572
HLLGVAAD+
Sbjct: 559 HLLGVAADK 585
>gb|BG355941.2|BG355941 EM1_18_E06.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 635
Score = 193 bits (417), Expect = 2e-048
Identities = 79/121 (65%), Positives = 99/121 (81%)
Frame = -2 / +1
Query: 563 RDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXXXX 384
RDPE+M+AA GT+DG+IDTVSA HP+ PLL LLKP+GQMVVVG P+KPL++PA+++
Sbjct: 1 RDPEEMKAATGTMDGIIDTVSAWHPITPLLALLKPLGQMVVVGGPSKPLELPAYAIVPGG 180
Query: 383 XXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAG 204
G+CQAML+FAG+HGI A+VEV+ MDYVNTAI+RLE+NDVRYRFV+DVAG
Sbjct: 181 KGVAGNSVGSVGDCQAMLEFAGKHGIGAEVEVIKMDYVNTAIERLEKNDVRYRFVIDVAG 360
Query: 203 S 201
S
Sbjct: 361 S 363
Score = 98.7 bits (209), Expect(2) = 2e-021
Identities = 45/89 (50%), Positives = 57/89 (64%)
Frame = +3 / -3
Query: 201 AARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHA 380
AA DVD+EAV ++V L LD +DVVH DD H+ D VL +++HGLA+PDAA P HA
Sbjct: 363 AAGDVDDEAVANVVLLEPLDRRVDVVHLDDFHLGADAVLPRELKHGLAVPDAADAVPSHA 184
Query: 381 LPAGDEAEGRHLERLGGQADDDHLAHRLE 467
LPA + R L RL + D HL RL+
Sbjct: 183 LPARHDGVRRQL*RLARPSHDHHLPQRLQ 97
Score = 73.5 bits (154), Expect(2) = 3e-028
Identities = 34/52 (65%), Positives = 37/52 (71%)
Frame = +1 / -1
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGS 561
AG+ SGL+G PTTTI P G S +SSG G ADTVSM PS VP AA I SGS
Sbjct: 158 AGSSSGLLGPPTTTICPNGFSSASSGVIGCHADTVSMMPSMVPVAAFISSGS 3
Score = 73.0 bits (153), Expect(2) = 3e-028
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = +1 / -1
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATS TKR TSF S R +AVLT*SI TSTSA +PC PA SSMAW S
Sbjct: 362 LPATSMTKR*RTSFFSSRSIAVLT*SILMTSTSAPMPCFPANSSMAWQS 216
Score = 24.9 bits (48), Expect(2) = 2e-021
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3 / -3
Query: 519 AVQGARRRPHLLGV 560
AV GARRR HLL V
Sbjct: 45 AVHGARRRLHLLRV 4
>gb|CX614740.1|CX614740 GABR1_16_B02.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_16_B02_A002 3', mRNA sequence
Length = 599
Score = 193 bits (415), Expect = 3e-048
Identities = 79/122 (64%), Positives = 99/122 (81%)
Frame = -2 / +3
Query: 566 SRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXXX 387
SRDPE+M+AA GT+DG+IDTV A HP+ PLL LLKP+GQMVVVG P+KPL++PA+++
Sbjct: 3 SRDPEEMKAATGTMDGIIDTVLAWHPITPLLALLKPLGQMVVVGGPSKPLELPAYAIVPG 182
Query: 386 XXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVA 207
G+CQAML+FAG+HGI A+VEV+ MDYVNTAI+RLE+NDVRYRFV+DVA
Sbjct: 183 GKGVAGNSVGSVGDCQAMLEFAGKHGIGAEVEVIKMDYVNTAIERLEKNDVRYRFVIDVA 362
Query: 206 GS 201
GS
Sbjct: 363 GS 368
Score = 98.7 bits (209), Expect(2) = 6e-022
Identities = 45/89 (50%), Positives = 57/89 (64%)
Frame = +3 / -1
Query: 201 AARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHA 380
AA DVD+EAV ++V L LD +DVVH DD H+ D VL +++HGLA+PDAA P HA
Sbjct: 368 AAGDVDDEAVANVVLLEPLDRRVDVVHLDDFHLGADAVLPRELKHGLAVPDAADAVPSHA 189
Query: 381 LPAGDEAEGRHLERLGGQADDDHLAHRLE 467
LPA + R L RL + D HL RL+
Sbjct: 188 LPARHDGVRRQL*RLARPSHDHHLPQRLQ 102
Score = 75.3 bits (158), Expect(2) = 7e-029
Identities = 35/54 (64%), Positives = 39/54 (72%)
Frame = +1 / -2
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRL 567
AG+ SGL+G PTTTI P G S +SSG G A+TVSM PS VP AA I SGSRL
Sbjct: 163 AGSSSGLLGPPTTTICPNGFSSASSGVIGCHANTVSMMPSMVPVAAFISSGSRL 2
Score = 73.0 bits (153), Expect(2) = 7e-029
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = +1 / -2
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATS TKR TSF S R +AVLT*SI TSTSA +PC PA SSMAW S
Sbjct: 367 LPATSMTKR*RTSFFSSRSIAVLT*SILMTSTSAPMPCFPANSSMAWQS 221
Score = 26.3 bits (51), Expect(2) = 6e-022
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3 / -1
Query: 519 AVQGARRRPHLLGVAA 566
AV GARRR HLL V A
Sbjct: 50 AVHGARRRLHLLRVPA 3
>gb|BG052001.1|BG052001 RHIZ2_7_F11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 665
Score = 192 bits (413), Expect = 5e-048
Identities = 79/145 (54%), Positives = 106/145 (73%)
Frame = -2 / +3
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPM 456
VISTS GK+ EA+ RLGADAF+VS+D E+M+AAA T+DG+I+TVSA+ P+ P + LLKP
Sbjct: 171 VISTSPGKKQEAMDRLGADAFVVSKDAEEMKAAASTMDGIINTVSANIPLAPFMSLLKPN 350
Query: 455 GQMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMD 276
G+MV+VGLPTK L++P F L + Q MLD A +HG+TAD+E+V D
Sbjct: 351 GKMVMVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRDTQEMLDVAAKHGVTADIELVDAD 530
Query: 275 YVNTAIQRLERNDVRYRFVVDVAGS 201
YVNTA++RL + DVRYRFV+D+ +
Sbjct: 531 YVNTAMERLAKADVRYRFVIDIGNT 605
Score = 81.7 bits (172), Expect(2) = 1e-025
Identities = 42/86 (48%), Positives = 50/86 (58%)
Frame = +3 / -1
Query: 210 DVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHALPA 389
DVD+EAVPD+ AL G + VV + ++R VL VEH L +P AA P L
Sbjct: 596 DVDDEAVPDVSLGEALHGRVHVVGVHEFYVRRHAVLGRHVEHLLRVPHAADAAPRQGLVP 417
Query: 390 GDEAEGRHLERLGGQADDDHLAHRLE 467
DE + R LE LGGQAD DHLA LE
Sbjct: 416 HDEIKRRDLESLGGQADHDHLAVGLE 339
Score = 71.2 bits (149), Expect(2) = 2e-022
Identities = 38/80 (47%), Positives = 40/80 (50%)
Frame = +1 / -2
Query: 397 RLKAGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRLTRN 576
R G LVGRPT TI P+GLSR +G G ADTV M PS V AAA I S S LT
Sbjct: 409 RSNGGISRALVGRPTMTILPLGLSRLMNGAKGMLADTVLMMPSMVLAAAFISSASLLTTK 230
Query: 577 XXXXXXXXXXXXXXXDVLMT 636
DVLMT
Sbjct: 229 ASAPSRSMASCFFPGDVLMT 170
Score = 55.6 bits (115), Expect(2) = 1e-025
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = +3 / -1
Query: 519 AVQGARRRPHLLGVAADQERVGTEAAEGLVPLAQRRADD 635
A+ GARRR HLLGV D E VG E GL+ L +RRADD
Sbjct: 287 AIHGARRRLHLLGVLTDDEGVGAEPVHGLLLLPRRRADD 171
Score = 55.6 bits (115), Expect(2) = 2e-022
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = +1 / -2
Query: 214 STTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMA 339
S TKRYLTS L+RR MAV T*S T+S SAV PC A SS++
Sbjct: 592 SMTKRYLTSALARRSMAVFT*SASTSSMSAVTPCLAATSSIS 467
>gb|BG559907.1|BG559907 RHIZ2_75_B06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 595
Score = 192 bits (413), Expect = 5e-048
Identities = 77/121 (63%), Positives = 99/121 (81%)
Frame = -2 / +2
Query: 563 RDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXXXX 384
RDPE+M+AA GT+DG+IDTVSA HP+ PLL LLKP+GQMV+VG P+KPL++PA+++
Sbjct: 2 RDPEEMKAATGTMDGIIDTVSAWHPITPLLALLKPLGQMVIVGGPSKPLELPAYAIVPGG 181
Query: 383 XXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAG 204
G+CQAML+FAG+HGI A+VEV+ MDYVNTA++RLE+NDVRYRFV+DVAG
Sbjct: 182 KGVAGNSVGSVGDCQAMLEFAGKHGIGAEVEVIKMDYVNTAMERLEKNDVRYRFVIDVAG 361
Query: 203 S 201
S
Sbjct: 362 S 364
Score = 73.0 bits (153), Expect(2) = 3e-028
Identities = 34/53 (64%), Positives = 37/53 (69%)
Frame = +1 / -2
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSR 564
AG+ SGL+G PT TI P G S +SSG G ADTVSM PS VP AA I SGSR
Sbjct: 159 AGSSSGLLGPPTITICPNGFSSASSGVIGCHADTVSMMPSMVPVAAFISSGSR 1
Score = 73.0 bits (153), Expect(2) = 3e-028
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = +1 / -2
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATS TKR TSF S R +AVLT*SI TSTSA +PC PA SSMAW S
Sbjct: 363 LPATSMTKR*RTSFFSSRSIAVLT*SILMTSTSAPMPCFPANSSMAWQS 217
>gb|CW032099.1|CW032099 104_261_10501183_114_30363 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10501183, DNA
sequence
Length = 577
Score = 191 bits (412), Expect = 8e-048
Identities = 78/145 (53%), Positives = 106/145 (73%)
Frame = -2 / -3
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPM 456
VISTS GK+ EA+ RLGADAF+VS+D E+M+AAA T+DG+I+TVSA+ P+ P + LLKP
Sbjct: 443 VISTSPGKKQEAMDRLGADAFVVSKDAEEMKAAASTMDGIINTVSANIPLAPFMSLLKPN 264
Query: 455 GQMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMD 276
G+M++VGLPTK L++P F L + Q MLD A +HG+TAD+E+V D
Sbjct: 263 GKMIMVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRDTQEMLDVAAKHGVTADIELVDAD 84
Query: 275 YVNTAIQRLERNDVRYRFVVDVAGS 201
YVNTA++RL + DVRYRFV+D+ +
Sbjct: 83 YVNTAMERLAKADVRYRFVIDIGNT 9
Score = 82.6 bits (174), Expect(2) = 7e-026
Identities = 43/86 (50%), Positives = 50/86 (58%)
Frame = +3 / +3
Query: 210 DVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHALPA 389
DVD+EAVPD+ AL G + VV L++R VL VEH L +P AA P L
Sbjct: 18 DVDDEAVPDVSLGEALHGRVHVVGVHQLYVRRHAVLGRHVEHLLRVPHAADAAPRQGLVP 197
Query: 390 GDEAEGRHLERLGGQADDDHLAHRLE 467
DE + R LE LGGQAD DHLA LE
Sbjct: 198 HDEIKRRDLESLGGQADHDHLAVGLE 275
Score = 68.4 bits (143), Expect(2) = 1e-021
Identities = 37/80 (46%), Positives = 39/80 (48%)
Frame = +1 / +1
Query: 397 RLKAGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRLTRN 576
R G LVGRPT I P+GLSR +G G ADTV M PS V AAA I S S LT
Sbjct: 205 RSNGGISRALVGRPTMIILPLGLSRLMNGARGMLADTVLMMPSMVLAAAFISSASLLTTK 384
Query: 577 XXXXXXXXXXXXXXXDVLMT 636
DVLMT
Sbjct: 385 ASAPSRSMASCFFPGDVLMT 444
Score = 55.6 bits (115), Expect(2) = 7e-026
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = +3 / +3
Query: 519 AVQGARRRPHLLGVAADQERVGTEAAEGLVPLAQRRADD 635
A+ GARRR HLLGV D E VG E GL+ L +RRADD
Sbjct: 327 AIHGARRRLHLLGVLTDDEGVGAEPVHGLLLLPRRRADD 443
Score = 55.6 bits (115), Expect(2) = 1e-021
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = +1 / +1
Query: 214 STTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMA 339
S TKRYLTS L+RR MAV T*S T+S SAV PC A SS++
Sbjct: 22 SMTKRYLTSALARRSMAVFT*SASTSSMSAVTPCLAATSSIS 147
>gb|CW391632.1|CW391632 fsbb001f077n22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f077n22, DNA
sequence
Length = 708
Score = 191 bits (412), Expect = 8e-048
Identities = 78/145 (53%), Positives = 106/145 (73%)
Frame = -2 / -1
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPM 456
VISTS GK+ EA+ RLGADAF+VS+D E+M+AAA T+DG+I+TVSA+ P+ P + LLKP
Sbjct: 660 VISTSPGKKQEAMDRLGADAFVVSKDAEEMKAAASTMDGIINTVSANIPLAPFMSLLKPN 481
Query: 455 GQMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMD 276
G+M++VGLPTK L++P F L + Q MLD A +HG+TAD+E+V D
Sbjct: 480 GKMIMVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRDTQEMLDVAAKHGVTADIELVDAD 301
Query: 275 YVNTAIQRLERNDVRYRFVVDVAGS 201
YVNTA++RL + DVRYRFV+D+ +
Sbjct: 300 YVNTAMERLAKADVRYRFVIDIGNT 226
Score = 82.6 bits (174), Expect(2) = 7e-026
Identities = 43/86 (50%), Positives = 50/86 (58%)
Frame = +3 / +1
Query: 210 DVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHALPA 389
DVD+EAVPD+ AL G + VV L++R VL VEH L +P AA P L
Sbjct: 235 DVDDEAVPDVSLGEALHGRVHVVGVHQLYVRRHAVLGRHVEHLLRVPHAADAAPRQGLVP 414
Query: 390 GDEAEGRHLERLGGQADDDHLAHRLE 467
DE + R LE LGGQAD DHLA LE
Sbjct: 415 HDEIKRRDLESLGGQADHDHLAVGLE 492
Score = 68.4 bits (143), Expect(2) = 1e-021
Identities = 37/80 (46%), Positives = 39/80 (48%)
Frame = +1 / +2
Query: 397 RLKAGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRLTRN 576
R G LVGRPT I P+GLSR +G G ADTV M PS V AAA I S S LT
Sbjct: 422 RSNGGISRALVGRPTMIILPLGLSRLMNGARGMLADTVLMMPSMVLAAAFISSASLLTTK 601
Query: 577 XXXXXXXXXXXXXXXDVLMT 636
DVLMT
Sbjct: 602 ASAPSRSMASCFFPGDVLMT 661
Score = 55.6 bits (115), Expect(2) = 7e-026
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = +3 / +1
Query: 519 AVQGARRRPHLLGVAADQERVGTEAAEGLVPLAQRRADD 635
A+ GARRR HLLGV D E VG E GL+ L +RRADD
Sbjct: 544 AIHGARRRLHLLGVLTDDEGVGAEPVHGLLLLPRRRADD 660
Score = 55.6 bits (115), Expect(2) = 1e-021
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = +1 / +2
Query: 214 STTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMA 339
S TKRYLTS L+RR MAV T*S T+S SAV PC A SS++
Sbjct: 239 SMTKRYLTSALARRSMAVFT*SASTSSMSAVTPCLAATSSIS 364
>gb|CN147510.1|CN147510 WOUND1_50_E09.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_50_E09_A002 3', mRNA sequence
Length = 725
Score = 191 bits (412), Expect = 8e-048
Identities = 78/145 (53%), Positives = 106/145 (73%)
Frame = -2 / +3
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPM 456
VISTS GK+ EA+ RLGADAF+VS+D E+M+AAA T+DG+I+TVSA+ P+ P + LLKP
Sbjct: 147 VISTSPGKKQEAMDRLGADAFVVSKDAEEMKAAASTMDGIINTVSANIPLAPFMSLLKPN 326
Query: 455 GQMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMD 276
G+M++VGLPTK L++P F L + Q MLD A +HG+TAD+E+V D
Sbjct: 327 GKMIMVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRDTQEMLDVAAKHGVTADIELVDAD 506
Query: 275 YVNTAIQRLERNDVRYRFVVDVAGS 201
YVNTA++RL + DVRYRFV+D+ +
Sbjct: 507 YVNTAMERLAKADVRYRFVIDIGNT 581
Score = 82.6 bits (174), Expect(2) = 1e-024
Identities = 43/86 (50%), Positives = 50/86 (58%)
Frame = +3 / -1
Query: 210 DVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHALPA 389
DVD+EAVPD+ AL G + VV L++R VL VEH L +P AA P L
Sbjct: 572 DVDDEAVPDVSLGEALHGRVHVVGVHQLYVRRHAVLGRHVEHLLRVPHAADAAPRQGLVP 393
Query: 390 GDEAEGRHLERLGGQADDDHLAHRLE 467
DE + R LE LGGQAD DHLA LE
Sbjct: 392 HDEIKRRDLESLGGQADHDHLAVGLE 315
Score = 68.4 bits (143), Expect(2) = 1e-021
Identities = 37/80 (46%), Positives = 39/80 (48%)
Frame = +1 / -2
Query: 397 RLKAGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRLTRN 576
R G LVGRPT I P+GLSR +G G ADTV M PS V AAA I S S LT
Sbjct: 385 RSNGGISRALVGRPTMIILPLGLSRLMNGARGMLADTVLMMPSMVLAAAFISSASLLTTK 206
Query: 577 XXXXXXXXXXXXXXXDVLMT 636
DVLMT
Sbjct: 205 ASAPSRSMASCFFPGDVLMT 146
Score = 55.6 bits (115), Expect(2) = 1e-021
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = +1 / -2
Query: 214 STTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMA 339
S TKRYLTS L+RR MAV T*S T+S SAV PC A SS++
Sbjct: 568 SMTKRYLTSALARRSMAVFT*SASTSSMSAVTPCLAATSSIS 443
Score = 51.5 bits (106), Expect(2) = 1e-024
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = +3 / -1
Query: 519 AVQGARRRPHLLGVAADQERVGTEAAEGLVPLAQRRADD 635
A+ GARRR HLLGV D E VG GL+ L +RRADD
Sbjct: 263 AIHGARRRLHLLGVLTDNEGVGA*PVHGLLLLPRRRADD 147
>gb|CW038410.1|CW038410 104_270_10504910_115_30386 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504910, DNA
sequence
Length = 636
Score = 191 bits (411), Expect = 1e-047
Identities = 78/117 (66%), Positives = 94/117 (80%)
Frame = -2 / -1
Query: 545 RAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXXXXXXXXXX 366
+AAA TLDG+IDTVSA H +VPLL LLKPMGQMVVVG P+ PL++PA+++
Sbjct: 558 QAAAATLDGIIDTVSAGHQIVPLLALLKPMGQMVVVGAPSTPLELPAYAIITGGKRVAGN 379
Query: 365 XXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAGSKI 195
+CQAMLDFAGEHG+TAD+EVV MDYVNTAI+RLE+NDVRYRFV+DVAGSK+
Sbjct: 378 GVGSVADCQAMLDFAGEHGVTADIEVVQMDYVNTAIERLEKNDVRYRFVIDVAGSKM 208
Score = 102 bits (217), Expect = 6e-021
Identities = 45/91 (49%), Positives = 61/91 (67%)
Frame = +3 / +1
Query: 195 NLAARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPG 374
+LAARDV++EA+P IV L LD +DVVH L++ GD +L+ +V+H LA+ D PG
Sbjct: 208 HLAARDVNDEAIPHIVLLEPLDRCVDVVHLHHLNVSGDAMLSCEVQHRLAVGDTPHAVPG 387
Query: 375 HALPAGDEAEGRHLERLGGQADDDHLAHRLE 467
H LPAGD+ R L+R +ADD HL H L+
Sbjct: 388 HPLPAGDDGVRRQLQRRAWRADDHHLPHGLQ 480
Score = 89.5 bits (189), Expect(2) = 2e-030
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +1 / +2
Query: 196 ILLPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
ILLPATS TKRYLTSF S R +AVLT*SI TTS SAV PCSPAKSS+AW S
Sbjct: 209 ILLPATSMTKRYLTSFFSSRSIAVLT*SICTTSMSAVTPCSPAKSSIAWQS 361
Score = 63.8 bits (133), Expect(2) = 2e-030
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = +1 / +2
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAA 543
AG+ SG++G PTTTI P+G S +SSGT ADTVSM PS V AAA
Sbjct: 419 AGSSSGVLGAPTTTICPMGFSSASSGTIWCPADTVSMMPSNVAAAA 556
>gb|CD229956.1|CD229956 SS1_40_H11.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_40_H11_A012 3', mRNA sequence
Length = 635
Score = 191 bits (411), Expect = 1e-047
Identities = 77/121 (63%), Positives = 98/121 (80%)
Frame = -2 / +1
Query: 563 RDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXXXX 384
RDPE+M+ A GT+DG+IDTVSA HP+ PLL LLKP+GQMV+VG P+KPL++PA+++
Sbjct: 1 RDPEEMKVAMGTMDGIIDTVSAWHPITPLLALLKPLGQMVIVGGPSKPLELPAYAIVPGG 180
Query: 383 XXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAG 204
G+CQAML+FAG+HGI A+VEV+ MDYVNTAI+RLE+NDVRYRFV+DVAG
Sbjct: 181 KGVAGNSVGSVGDCQAMLEFAGKHGIGAEVEVIKMDYVNTAIERLEKNDVRYRFVIDVAG 360
Query: 203 S 201
S
Sbjct: 361 S 363
Score = 102 bits (217), Expect = 6e-021
Identities = 46/89 (51%), Positives = 58/89 (65%)
Frame = +3 / -3
Query: 201 AARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHA 380
AA DVD+EAV D++ L LD +DVVH DDLH+ D VL +++HGLA+PDAA P HA
Sbjct: 363 AAGDVDDEAVADVILLEPLDRRVDVVHLDDLHLGADAVLPRELKHGLAVPDAADAVPSHA 184
Query: 381 LPAGDEAEGRHLERLGGQADDDHLAHRLE 467
LPA + R L RL + D HL RL+
Sbjct: 183 LPARHDGVRRQL*RLARPSHDHHLPQRLQ 97
Score = 73.0 bits (153), Expect(2) = 8e-027
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = +1 / -1
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATS TKR TSF S R +AVLT*SI TSTSA +PC PA SSMAW S
Sbjct: 362 LPATSMTKR*RTSFFSSRSIAVLT*SILMTSTSAPMPCFPANSSMAWQS 216
Score = 68.4 bits (143), Expect(2) = 8e-027
Identities = 32/52 (61%), Positives = 35/52 (67%)
Frame = +1 / -1
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGS 561
AG+ SGL+G PT TI P G S +SSG G ADTVSM PS VP A I SGS
Sbjct: 158 AGSSSGLLGPPTITICPNGFSSASSGVIGCHADTVSMMPSMVPIATFISSGS 3
>gb|CN149533.1|CN149533 WOUND1_63_H02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_63_H02_A002 3', mRNA sequence
Length = 727
Score = 189 bits (408), Expect = 3e-047
Identities = 78/145 (53%), Positives = 105/145 (72%)
Frame = -2 / +3
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPM 456
VISTS GK+ EA+ RLGADAF+VS+D E+M+AAA T+DG+I+TVSA+ P P + LLKP
Sbjct: 75 VISTSPGKKQEAMDRLGADAFVVSKDAEEMKAAASTMDGIINTVSANIPRAPFMSLLKPN 254
Query: 455 GQMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMD 276
G+M++VGLPTK L++P F L + Q MLD A +HG+TAD+E+V D
Sbjct: 255 GKMIMVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRDTQEMLDVAAKHGVTADIELVDAD 434
Query: 275 YVNTAIQRLERNDVRYRFVVDVAGS 201
YVNTA++RL + DVRYRFV+D+ +
Sbjct: 435 YVNTAMERLAKADVRYRFVIDIGNT 509
Score = 82.6 bits (174), Expect(2) = 2e-025
Identities = 43/86 (50%), Positives = 50/86 (58%)
Frame = +3 / -3
Query: 210 DVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHALPA 389
DVD+EAVPD+ AL G + VV L++R VL VEH L +P AA P L
Sbjct: 500 DVDDEAVPDVSLGEALHGRVHVVGVHQLYVRRHAVLGRHVEHLLRVPHAADAAPRQGLVP 321
Query: 390 GDEAEGRHLERLGGQADDDHLAHRLE 467
DE + R LE LGGQAD DHLA LE
Sbjct: 320 HDEIKRRDLESLGGQADHDHLAVGLE 243
Score = 68.4 bits (143), Expect(2) = 1e-021
Identities = 37/80 (46%), Positives = 39/80 (48%)
Frame = +1 / -1
Query: 397 RLKAGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRLTRN 576
R G LVGRPT I P+GLSR +G G ADTV M PS V AAA I S S LT
Sbjct: 313 RSNGGISRALVGRPTMIILPLGLSRLMNGARGMLADTVLMMPSMVLAAAFISSASLLTTK 134
Query: 577 XXXXXXXXXXXXXXXDVLMT 636
DVLMT
Sbjct: 133 ASAPSRSMASCFFPGDVLMT 74
Score = 55.6 bits (115), Expect(2) = 1e-021
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = +1 / -1
Query: 214 STTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMA 339
S TKRYLTS L+RR MAV T*S T+S SAV PC A SS++
Sbjct: 496 SMTKRYLTSALARRSMAVFT*SASTSSMSAVTPCLAATSSIS 371
Score = 54.2 bits (112), Expect(2) = 2e-025
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +3 / -3
Query: 519 AVQGARRRPHLLGVAADQERVGTEAAEGLVPLAQRRADD 635
A+ GARRR HLLGV D E VG + GL+ L +RRADD
Sbjct: 191 AIHGARRRLHLLGVLTDDESVGAKPVHGLLLLPRRRADD 75
>gb|CF429876.1|CF429876 PH1_25_A07.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_A07_A002 3', mRNA sequence
Length = 542
Score = 133 bits (286), Expect(2) = 5e-047
Identities = 53/87 (60%), Positives = 66/87 (75%)
Frame = -2 / +2
Query: 566 SRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXXX 387
SRD EQM+AAAGT+DG+IDTVSA HP+VPLL LLKPMGQMV+VG P+ PL++PA+++
Sbjct: 2 SRDTEQMKAAAGTMDGIIDTVSAGHPIVPLLALLKPMGQMVIVGAPSTPLELPAYAIITG 181
Query: 386 XXXXXXXXXXXXGECQAMLDFAGEHGI 306
+CQAMLDFAG+HGI
Sbjct: 182 GKRVAGNGVGSIADCQAMLDFAGQHGI 262
Score = 79.4 bits (167), Expect(3) = 1e-029
Identities = 36/54 (66%), Positives = 41/54 (75%)
Frame = +1 / -3
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRL 567
AG+ SG++G PT TI P+G S +SSGT G ADTVSM PS VPAAA ICS SRL
Sbjct: 162 AGSSSGVLGAPTITICPMGFSSASSGTIGCPADTVSMMPSIVPAAAFICSVSRL 1
Score = 75.3 bits (158), Expect(2) = 5e-047
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = -2 / +3
Query: 320 GEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAGS 201
G TAD+E+V MDYVNTA++RLERNDVRYRFVVDVAGS
Sbjct: 249 GSTASTADIELVRMDYVNTAMERLERNDVRYRFVVDVAGS 368
Score = 59.3 bits (123), Expect(3) = 1e-029
Identities = 29/35 (82%), Positives = 30/35 (85%)
Frame = +1 / -2
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAV 306
LPATSTT RYLTSFLS R MAVLT*SI T+S SAV
Sbjct: 367 LPATSTTNRYLTSFLSSRSMAVLT*SILTSSMSAV 263
Score = 30.4 bits (60), Expect(3) = 1e-029
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1 / -3
Query: 307 IPCSPAKSSMAWHS 348
+PC PAKSS+AW S
Sbjct: 261 MPCCPAKSSIAWQS 220
>gb|CN145887.1|CN145887 WOUND1_36_A11.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_36_A11_A002 3', mRNA sequence
Length = 819
Score = 188 bits (406), Expect = 5e-047
Identities = 77/145 (53%), Positives = 105/145 (72%)
Frame = -2 / +1
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPM 456
VISTS GK+ EA+ RLGADAF+VS+D E+M+AAA T+DG+I+TVSA+ P+ P + LLKP
Sbjct: 211 VISTSPGKKQEAMDRLGADAFVVSKDAEEMKAAASTMDGIINTVSANIPLAPFMSLLKPN 390
Query: 455 GQMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMD 276
G+M++VGLPTK L++P F L + Q MLD A +HG+TAD+E+V D
Sbjct: 391 GKMIMVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRDTQEMLDVAAKHGVTADIELVDAD 570
Query: 275 YVNTAIQRLERNDVRYRFVVDVAGS 201
YVNTA++RL + DVRYR V+D+ +
Sbjct: 571 YVNTAMERLAKADVRYRLVIDIGNT 645
Score = 82.6 bits (174), Expect(2) = 7e-026
Identities = 43/86 (50%), Positives = 50/86 (58%)
Frame = +3 / -1
Query: 210 DVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHALPA 389
DVD+EAVPD+ AL G + VV L++R VL VEH L +P AA P L
Sbjct: 636 DVDDEAVPDVSLGEALHGRVHVVGVHQLYVRRHAVLGRHVEHLLRVPHAADAAPRQGLVP 457
Query: 390 GDEAEGRHLERLGGQADDDHLAHRLE 467
DE + R LE LGGQAD DHLA LE
Sbjct: 456 HDEIKRRDLESLGGQADHDHLAVGLE 379
Score = 68.4 bits (143), Expect(2) = 3e-021
Identities = 37/80 (46%), Positives = 39/80 (48%)
Frame = +1 / -2
Query: 397 RLKAGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALICSGSRLTRN 576
R G LVGRPT I P+GLSR +G G ADTV M PS V AAA I S S LT
Sbjct: 449 RSNGGISRALVGRPTMIILPLGLSRLMNGARGMLADTVLMMPSMVLAAAFISSASLLTTK 270
Query: 577 XXXXXXXXXXXXXXXDVLMT 636
DVLMT
Sbjct: 269 ASAPSRSMASCFFPGDVLMT 210
Score = 55.6 bits (115), Expect(2) = 7e-026
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = +3 / -1
Query: 519 AVQGARRRPHLLGVAADQERVGTEAAEGLVPLAQRRADD 635
A+ GARRR HLLGV D E VG E GL+ L +RRADD
Sbjct: 327 AIHGARRRLHLLGVLTDDEGVGAEPVHGLLLLPRRRADD 211
Score = 54.2 bits (112), Expect(2) = 3e-021
Identities = 26/42 (61%), Positives = 31/42 (73%)
Frame = +1 / -2
Query: 214 STTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMA 339
S T+RYLTS L+RR MAV T*S T+S SAV PC A SS++
Sbjct: 632 SMTRRYLTSALARRSMAVFT*SASTSSMSAVTPCLAATSSIS 507
>gb|CF480170.1|CF480170 POL1_64_D07.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_D07_A002 3', mRNA sequence
Length = 570
Score = 183 bits (395), Expect = 2e-045
Identities = 74/141 (52%), Positives = 102/141 (72%)
Frame = -2 / +1
Query: 623 SLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMV 444
S GK+ EA+ RLGADAF+VS+D E+M+AAA T+DG+I+TVSA+ P+ P + LLKP G+M+
Sbjct: 1 SPGKKQEAMDRLGADAFVVSKDAEEMKAAASTMDGIINTVSANIPLAPFMSLLKPNGKMI 180
Query: 443 VVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMDYVNT 264
+VGLPTK L++P F L + Q MLD A +HG+TAD+E+V DYVNT
Sbjct: 181 MVGLPTKALEIPPFDLIMGNKTLAGSCIGGMRDTQEMLDVAAKHGVTADIELVDADYVNT 360
Query: 263 AIQRLERNDVRYRFVVDVAGS 201
A++RL + DVRYRFV+D+ +
Sbjct: 361 AMERLAKADVRYRFVIDIGNT 423
Score = 82.6 bits (174), Expect(2) = 5e-023
Identities = 43/86 (50%), Positives = 50/86 (58%)
Frame = +3 / -1
Query: 210 DVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHALPA 389
DVD+EAVPD+ AL G + VV L++R VL VEH L +P AA P L
Sbjct: 414 DVDDEAVPDVSLGEALHGRVHVVGVHQLYVRRHAVLGRHVEHLLRVPHAADAAPRQGLVP 235
Query: 390 GDEAEGRHLERLGGQADDDHLAHRLE 467
DE + R LE LGGQAD DHLA LE
Sbjct: 234 HDEIKRRDLESLGGQADHDHLAVGLE 157
Score = 46.0 bits (94), Expect(2) = 5e-023
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +3 / -1
Query: 519 AVQGARRRPHLLGVAADQERVGTEAAEGLVPLAQR 623
A+ GARRR HLLGV D E VG E GL+ L +R
Sbjct: 105 AIHGARRRLHLLGVLTDDEGVGAEPVHGLLLLPRR 1
>gb|CW409779.1|CW409779 fsbb001f104d18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f104d18, DNA
sequence
Length = 703
Score = 150 bits (322), Expect(2) = 2e-045
Identities = 59/97 (60%), Positives = 76/97 (78%)
Frame = -2 / -1
Query: 545 RAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXXXXXXXXXX 366
+AAAGT+DG+IDTVSA HP+VPLL LLKPMGQMV+VG P+ PL++PA+++
Sbjct: 292 QAAAGTMDGIIDTVSAGHPIVPLLALLKPMGQMVIVGAPSTPLELPAYAIITGGKRVAGN 113
Query: 365 XXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQ 255
+CQAMLDFAG+HGITAD+E+V MDYVNTA++
Sbjct: 112 GVGSIADCQAMLDFAGQHGITADIELVRMDYVNTAME 2
Score = 68.0 bits (142), Expect(3) = 2e-028
Identities = 30/48 (62%), Positives = 36/48 (75%)
Frame = +1 / +3
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVSMTPSKVPAAALI 549
AG+ SG++G PT TI P+G S +SSGT G ADTVSM PS VPAAA +
Sbjct: 153 AGSSSGVLGAPTITICPMGFSSASSGTIGCPADTVSMMPSIVPAAACV 296
Score = 53.3 bits (110), Expect(2) = 2e-045
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = -2 / -2
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGT 528
VIS+S KR EA+ RLGAD FLVSRD EQM+A A +
Sbjct: 492 VISSSPAKRGEAIERLGADEFLVSRDTEQMKATAAS 385
Score = 52.8 bits (109), Expect(3) = 2e-028
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +1 / +3
Query: 259 MAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
MAVLT*SI T+S SAV+PC PAKSS+AW S
Sbjct: 6 MAVLT*SILTSSMSAVMPCCPAKSSIAWQS 95
Score = 43.7 bits (89), Expect(3) = 2e-028
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3 / +1
Query: 546 HLLGVAADQERVGTEAAEGLVPLAQRRAD 632
HLLGVAADQE VG +A +GL L + RAD
Sbjct: 403 HLLGVAADQELVGAKALDGLSTLGRGRAD 489
>gb|CF431564.1|CF431564 NIT1_8_B02.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_8_B02_A002 3', mRNA sequence
Length = 485
Score = 171 bits (367), Expect = 1e-041
Identities = 69/104 (66%), Positives = 83/104 (79%)
Frame = -2 / +2
Query: 512 DTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAM 333
DTVSA HP+VPLL LLKPMGQMV+VG P+ PL++PA+++ +CQAM
Sbjct: 2 DTVSAGHPIVPLLALLKPMGQMVIVGAPSTPLELPAYAIITGGKRVAGNGVGSIADCQAM 181
Query: 332 LDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAGS 201
LDFAG+HGITAD+E+V MDYVNTA++RLERNDVRYRFVVDVAGS
Sbjct: 182 LDFAGQHGITADIELVRMDYVNTAMERLERNDVRYRFVVDVAGS 313
Score = 107 bits (228), Expect = 2e-022
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +3 / -2
Query: 204 ARDVDNEAVPDIVPL*ALDGGIDVVHPDDLHIRGDPVLAGKVEHGLALPDAAAGTPGHAL 383
A D+++E VPD+VPL L G +DVVHP++L +RGD VL +V+H LA+ D PGH L
Sbjct: 310 ASDINDEPVPDVVPLQPLHGRVDVVHPNELDVRGDAVLPREVQHRLAVGDTPHSVPGHPL 131
Query: 384 PAGDEAEGRHLERLGGQADDDHLAHRLE 467
PA D+ R L+R +ADD HL H L+
Sbjct: 130 PARDDGVRRQLQRRAWRADDHHLPHGLQ 47
Score = 86.8 bits (183), Expect(2) = 1e-025
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +1 / -3
Query: 202 LPATSTTKRYLTSFLSRRWMAVLT*SIPTTSTSAVIPCSPAKSSMAWHS 348
LPATSTT RYLTSFLS R MAVLT*SI T+S SAV+PC PAKSS+AW S
Sbjct: 312 LPATSTTNRYLTSFLSSRSMAVLT*SILTSSMSAVMPCCPAKSSIAWQS 166
Score = 51.0 bits (105), Expect(2) = 1e-025
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1 / -3
Query: 406 AGTWSGLVGRPTTTIWPIGLSRSSSGTTGWSADTVS 513
AG+ SG++G PT TI P+G S +SSGT G ADTVS
Sbjct: 108 AGSSSGVLGAPTITICPMGFSSASSGTIGCPADTVS 1
>gb|CD225116.1|CD225116 CCC1_38_B06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_38_B06_A007 3', mRNA sequence
Length = 630
Score = 165 bits (355), Expect = 5e-040
Identities = 69/145 (47%), Positives = 97/145 (66%)
Frame = -2 / +1
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPM 456
VISTS KR+EA+ LGADAF+VS D QM+A GT+ G+++T SA + L LLKP
Sbjct: 52 VISTSPEKREEAMETLGADAFVVSSDANQMKAVKGTMHGILNTASASMSMYAYLALLKPQ 231
Query: 455 GQMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMD 276
G+M+++GLP KPLQ+ AFSL + Q M+DFA +HG+ AD+E++G +
Sbjct: 232 GKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLVADIELIGTE 411
Query: 275 YVNTAIQRLERNDVRYRFVVDVAGS 201
VN A++RL + +VRYRFV+DV +
Sbjct: 412 EVNEAMERLAKGEVRYRFVIDVGNT 486
>gb|CD227113.1|CD227113 CCC1_4_B10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_4_B10_A007 3', mRNA sequence
Length = 647
Score = 165 bits (355), Expect = 5e-040
Identities = 69/145 (47%), Positives = 97/145 (66%)
Frame = -2 / +2
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPM 456
VISTS KR+EA+ LGADAF+VS D QM+A GT+ G+++T SA + L LLKP
Sbjct: 62 VISTSPEKREEAMETLGADAFVVSSDANQMKAVKGTMHGILNTASASMSMYAYLALLKPQ 241
Query: 455 GQMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMD 276
G+M+++GLP KPLQ+ AFSL + Q M+DFA +HG+ AD+E++G +
Sbjct: 242 GKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLVADIELIGTE 421
Query: 275 YVNTAIQRLERNDVRYRFVVDVAGS 201
VN A++RL + +VRYRFV+DV +
Sbjct: 422 EVNEAMERLAKGEVRYRFVIDVGNT 496
>gb|CD203869.1|CD203869 HS1_2_H07.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_2_H07_A012 3', mRNA sequence
Length = 627
Score = 163 bits (351), Expect = 2e-039
Identities = 68/145 (46%), Positives = 96/145 (66%)
Frame = -2 / +2
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPM 456
VISTS KR+EA+ GADAF+VS D QM+A GT+ G+++T SA + L LLKP
Sbjct: 41 VISTSPEKREEAMETFGADAFVVSSDANQMKAVKGTMHGILNTASASMSMYAYLALLKPQ 220
Query: 455 GQMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMD 276
G+M+++GLP KPLQ+ AFSL + Q M+DFA +HG+ AD+E++G +
Sbjct: 221 GKMILLGLPEKPLQISAFSLVTGGKTLAGSCMGSIRDTQEMMDFAAKHGLVADIELIGTE 400
Query: 275 YVNTAIQRLERNDVRYRFVVDVAGS 201
VN A++RL + +VRYRFV+DV +
Sbjct: 401 EVNEAMERLAKGEVRYRFVIDVGNT 475
>gb|CF484412.1|CF484412 POL1_25_D12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_25_D12_A002 3', mRNA sequence
Length = 568
Score = 163 bits (350), Expect = 3e-039
Identities = 65/128 (50%), Positives = 91/128 (71%)
Frame = -2 / +3
Query: 584 ADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPA 405
ADA +VS+D E+M+AAA T+DG+I+TVSA+ P+ P + LLKP G+M++VGLPTK L++P
Sbjct: 3 ADALVVSKDAEEMKAAASTMDGIINTVSANIPLAPFMSLLKPNGKMIMVGLPTKALEIPP 182
Query: 404 FSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYR 225
F L + Q MLD A +HG+TAD+E+V DYVNTA++RL + DVRYR
Sbjct: 183 FDLIMGNKTLAGSCIGGMRDTQEMLDVAAKHGVTADIELVDADYVNTAMERLAKADVRYR 362
Query: 224 FVVDVAGS 201
FV+D+ +
Sbjct: 363 FVIDIGNT 386
>gb|CF757955.1|CF757955 DSAF1_25_E02.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_25_E02_A011 3', mRNA sequence
Length = 528
Score = 156 bits (336), Expect = 2e-037
Identities = 62/123 (50%), Positives = 87/123 (70%)
Frame = -2 / +1
Query: 569 VSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXX 390
VS+D E+M+AAA T+DG+I+TVSA+ P+ P + LLKP G+M++VGLPTK L++P F L
Sbjct: 1 VSKDAEEMKAAASTMDGIINTVSANIPLAPFMSLLKPNGKMIMVGLPTKALEIPPFDLIM 180
Query: 389 XXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDV 210
+ Q MLD A +HG+TAD+E+V DYVNTA++RL + DVRYRFV+D+
Sbjct: 181 GNKTLAGSCIGGMRDTQEMLDLAAKHGVTADIELVDADYVNTAMERLAKADVRYRFVIDI 360
Query: 209 AGS 201
+
Sbjct: 361 GNT 369
>gb|BI075108.1|BI075108 IP1_19_G01.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 543
Score = 155 bits (334), Expect = 4e-037
Identities = 65/102 (63%), Positives = 81/102 (79%)
Frame = -2 / +1
Query: 506 VSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLD 327
VSA HP+ PLL LLKP+GQMVVVG P+KPL++PA+++ G+CQAML+
Sbjct: 1 VSAWHPITPLLALLKPLGQMVVVGGPSKPLELPAYAIVPGGKGVAGNSVGSVGDCQAMLE 180
Query: 326 FAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAGS 201
FAG+HGI A+VEV+ MDYVNTAI+RLE+NDVRYRFV+DVAGS
Sbjct: 181 FAGKHGIGAEVEVIKMDYVNTAIERLEKNDVRYRFVIDVAGS 306
>gb|CN148236.1|CN148236 WOUND1_55_B09.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_55_B09_A002 3', mRNA sequence
Length = 549
Score = 155 bits (334), Expect = 4e-037
Identities = 62/124 (50%), Positives = 88/124 (70%)
Frame = -2 / +3
Query: 572 LVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLX 393
+VS+D E+M+AAA T+DG+I+TVSA+ P+ P + LLKP G+M++VGLPTK L++P F L
Sbjct: 3 VVSKDAEEMKAAATTMDGIINTVSANIPLAPFMSLLKPNGKMIMVGLPTKALEIPPFDLI 182
Query: 392 XXXXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVD 213
+ Q MLD A +HG+TAD+E+V DYVNTA++RL + DVRYRFV+D
Sbjct: 183 MGNKTLAGSCIGGMRDTQEMLDVAAKHGVTADIELVDADYVNTAMERLAKADVRYRFVID 362
Query: 212 VAGS 201
+ +
Sbjct: 363 IGNT 374
>gb|CF487816.1|CF487816 POL1_46_C06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_46_C06_A002 3', mRNA sequence
Length = 549
Score = 154 bits (331), Expect = 1e-036
Identities = 61/122 (50%), Positives = 86/122 (70%)
Frame = -2 / +3
Query: 566 SRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXXX 387
S+D E+M+AAA T+DG+I+TVSA+ P+ P + LLKP G+M++VGLPTK L++P F L
Sbjct: 3 SKDAEEMKAAASTMDGIINTVSANIPLAPFMSLLKPNGKMIMVGLPTKALEIPPFDLIMG 182
Query: 386 XXXXXXXXXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVA 207
+ Q MLD A +HG+TAD+E+V DYVNTA++RL + DVRYRFV+D+
Sbjct: 183 NKTLAGSCIGGMRDTQEMLDVAAKHGVTADIELVDADYVNTAMERLAKADVRYRFVIDIG 362
Query: 206 GS 201
+
Sbjct: 363 NT 368
>gb|BG466123.1|BG466123 RHIZ2_48_H07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 473
Score = 148 bits (317), Expect = 1e-034
Identities = 59/98 (60%), Positives = 77/98 (78%)
Frame = -2 / +2
Query: 494 HPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGE 315
HP+ PLL LLKP+GQMV+VG P+ PL++PA+++ G+CQAML+FAG+
Sbjct: 2 HPITPLLALLKPLGQMVIVGGPSNPLELPAYAIVPGGKGVAGNSVGSVGDCQAMLEFAGK 181
Query: 314 HGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAGS 201
HGI A+VEV+ MDYVNTA++RLE+NDVRYRFV+DVAGS
Sbjct: 182 HGIGAEVEVIKMDYVNTAMERLEKNDVRYRFVIDVAGS 295
>gb|CN140813.1|CN140813 OX1_47_F12.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_47_F12_A002 3', mRNA sequence
Length = 669
Score = 146 bits (313), Expect = 3e-034
Identities = 58/118 (49%), Positives = 81/118 (68%)
Frame = -2 / +1
Query: 554 EQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPMGQMVVVGLPTKPLQVPAFSLXXXXXXX 375
E+M+AAA T+DG+I+ VSA+ P+ P + LLKP G+M++VGLPTK L++P F L
Sbjct: 1 EEMKAAASTMDGIINMVSANIPLAPFMSLLKPKGKMIMVGLPTKALEIPPFDLIMGNKTL 180
Query: 374 XXXXXXXXGECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAGS 201
Q MLD A +HG+TAD+E+V DYVNTA++RL + DVRYRFV+D+ +
Sbjct: 181 AGSCIGGMRNTQEMLDVAAKHGVTADIELVDADYVNTAMERLAKADVRYRFVIDIGNT 354
>gb|BM328692.1|BM328692 PIC1_25_D10.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 555
Score = 144 bits (308), Expect = 2e-033
Identities = 60/94 (63%), Positives = 75/94 (79%)
Frame = -2 / +1
Query: 482 PLLDLLKPMGQMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGIT 303
PLL LLKP+GQMVVVG P+KPL++PA+++ G+CQAML+FAG+HGI
Sbjct: 1 PLLALLKPLGQMVVVGGPSKPLELPAYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIG 180
Query: 302 ADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAGS 201
A+VEV+ MDYVNTAI+RLE+NDVRYRFV+DVAGS
Sbjct: 181 AEVEVIKMDYVNTAIERLEKNDVRYRFVIDVAGS 282
>gb|BG241324.1|BG241324 RHIZ2_49_A04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 462
Score = 142 bits (304), Expect = 6e-033
Identities = 58/94 (61%), Positives = 75/94 (79%)
Frame = -2 / +3
Query: 482 PLLDLLKPMGQMVVVGLPTKPLQVPAFSLXXXXXXXXXXXXXXXGECQAMLDFAGEHGIT 303
PLL LLKP+GQMV+VG P+KPL++PA+++ G+CQAML+FAG+HGI
Sbjct: 3 PLLALLKPLGQMVIVGGPSKPLELPAYAIVPGGKGVAGNSVGSVGDCQAMLEFAGKHGIG 182
Query: 302 ADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAGS 201
A+VEV+ MDYVNTA++RLE+NDVRYRFV+DVAGS
Sbjct: 183 AEVEVIKMDYVNTAMERLEKNDVRYRFVIDVAGS 284
>gb|CN137709.1|CN137709 OX1_59_B11.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_59_B11_A002 3', mRNA sequence
Length = 776
Score = 80.3 bits (169), Expect(2) = 3e-031
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = -2 / +2
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPM 456
VIS+S KR EA+ LGADA+LVS D M AAA +LD +IDTV HP+ P L LL+
Sbjct: 65 VISSSSKKRTEAMDHLGADAYLVSTDAAAMAAAADSLDYIIDTVPVHHPLEPYLSLLRLD 244
Query: 455 GQMVVVGLPTKPL 417
G+ V++G+ +PL
Sbjct: 245 GKHVLLGVIGEPL 283
Score = 76.2 bits (160), Expect(2) = 3e-031
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -2 / +2
Query: 347 ECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAGSKI 195
E +L F + G+T+ +EVV M YVN A++RLERNDVRYRFVVDVAGS +
Sbjct: 353 ETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGSNV 505
>gb|CN149190.1|CN149190 WOUND1_61_F05.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_61_F05_A002 3', mRNA sequence
Length = 845
Score = 79.9 bits (168), Expect(2) = 3e-031
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = -2 / +3
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPM 456
VIS+S KR EA+ LGADA+LVS D M AAA +LD +IDTV HP+ P L LL+
Sbjct: 201 VISSSSKKRAEAMDHLGADAYLVSTDAAAMAAAADSLDYIIDTVPVHHPLEPYLSLLRLD 380
Query: 455 GQMVVVGLPTKPL 417
G+ V++G+ +PL
Sbjct: 381 GKHVLLGVIGEPL 419
Score = 76.2 bits (160), Expect(2) = 3e-031
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -2 / +3
Query: 347 ECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAGSKI 195
E +L F + G+T+ +EVV M YVN A++RLERNDVRYRFVVDVAGS +
Sbjct: 489 ETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGSNV 641
>gb|CX610663.1|CX610663 ANR1_20_C10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_20_C10_A002 3', mRNA sequence
Length = 771
Score = 79.9 bits (168), Expect(2) = 3e-031
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = -2 / +3
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPM 456
VIS+S KR EA+ LGADA+LVS D M AAA +LD +IDTV HP+ P L LL+
Sbjct: 57 VISSSSKKRAEAMDHLGADAYLVSTDAAAMAAAADSLDYIIDTVPVHHPLEPYLSLLRLD 236
Query: 455 GQMVVVGLPTKPL 417
G+ V++G+ +PL
Sbjct: 237 GKHVLLGVIGEPL 275
Score = 76.2 bits (160), Expect(2) = 3e-031
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -2 / +3
Query: 347 ECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAGSKI 195
E +L F + G+T+ +EVV M YVN A++RLERNDVRYRFVVDVAGS +
Sbjct: 345 ETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGSNV 497
>gb|CX612412.1|CX612412 GABR1_2_G03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_2_G03_A002 3', mRNA sequence
Length = 767
Score = 79.9 bits (168), Expect(2) = 3e-031
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = -2 / +1
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPM 456
VIS+S KR EA+ LGADA+LVS D M AAA +LD +IDTV HP+ P L LL+
Sbjct: 49 VISSSSKKRAEAMDHLGADAYLVSTDAAAMAAAADSLDYIIDTVPVHHPLEPYLSLLRLD 228
Query: 455 GQMVVVGLPTKPL 417
G+ V++G+ +PL
Sbjct: 229 GKHVLLGVIGEPL 267
Score = 76.2 bits (160), Expect(2) = 3e-031
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -2 / +1
Query: 347 ECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAGSKI 195
E +L F + G+T+ +EVV M YVN A++RLERNDVRYRFVVDVAGS +
Sbjct: 337 ETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGSNV 489
>gb|CX611730.1|CX611730 ANR1_26_H06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_26_H06_A002 3', mRNA sequence
Length = 765
Score = 79.9 bits (168), Expect(2) = 3e-031
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = -2 / +1
Query: 635 VISTSLGKRDEALGRLGADAFLVSRDPEQMRAAAGTLDGVIDTVSADHPVVPLLDLLKPM 456
VIS+S KR EA+ LGADA+LVS D M AAA +LD +IDTV HP+ P L LL+
Sbjct: 79 VISSSSKKRAEAMDHLGADAYLVSTDAAAMAAAADSLDYIIDTVPVHHPLEPYLSLLRLD 258
Query: 455 GQMVVVGLPTKPL 417
G+ V++G+ +PL
Sbjct: 259 GKHVLLGVIGEPL 297
Score = 76.2 bits (160), Expect(2) = 3e-031
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -2 / +1
Query: 347 ECQAMLDFAGEHGITADVEVVGMDYVNTAIQRLERNDVRYRFVVDVAGSKI 195
E +L F + G+T+ +EVV M YVN A++RLERNDVRYRFVVDVAGS +
Sbjct: 367 ETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGSNV 519
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 666,307,534
Number of Sequences: 832831
Number of extensions: 9716560
Number of successful extensions: 189512
Number of sequences better than 1.0e-020: 68
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 18904149054
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)