TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2943966.2.1
(599 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BZ628758.1|BZ628758 ih62b02.b1 WGS-SbicolorF (DH5a methy... 257 1e-067
gb|BZ628759.1|BZ628759 ih62b02.g1 WGS-SbicolorF (DH5a methy... 257 1e-067
gb|CW318949.1|CW318949 104_811_11474228_148_35883_074 Sorgh... 257 1e-067
gb|CN146262.1|CN146262 WOUND1_39_D11.b1_A002 Wounded leaves... 257 1e-067
gb|CX612764.1|CX612764 GABR1_4_G09.b1_A002 GA- or brassinol... 255 3e-067
gb|BG241494.1|BG241494 RHIZ2_50_A05.g1_A003 Rhizome2 (RHIZ2... 254 6e-067
gb|CD236128.1|CD236128 SS1_32_B09.b1_A012 Salt-stressed see... 251 8e-066
gb|CW249841.1|CW249841 104_711_11223062_116_35044_051 Sorgh... 246 3e-064
gb|CW124219.1|CW124219 104_503_11111651_148_34693_034 Sorgh... 243 2e-063
gb|CL177459.1|CL177459 104_384_10893845_116_31916_293 Sorgh... 215 5e-055
gb|BG101966.1|BG101966 RHIZ2_22_A05.g1_A003 Rhizome2 (RHIZ2... 208 4e-053
gb|CN137489.1|CN137489 OX1_57_D04.g1_A002 Oxidatively-stres... 205 5e-052
gb|BE363001.2|BE363001 DG1_92_G01.g1_A002 Dark Grown 1 (DG1... 204 1e-051
gb|BG356843.1|BG356843 OV2_10_F11.g1_A002 Ovary 2 (OV2) Sor... 187 2e-046
gb|CD429550.1|CD429550 ETH1_14_C02.b1_A002 Ethylene-treated... 187 2e-046
gb|CN137990.1|CN137990 OX1_61_C04.b1_A002 Oxidatively-stres... 187 2e-046
gb|BG559195.1|BG559195 RHIZ2_55_G08.g1_A003 Rhizome2 (RHIZ2... 186 3e-046
gb|CW180237.1|CW180237 104_594_11160530_148_36631_003 Sorgh... 185 6e-046
gb|BE356814.1|BE356814 DG1_12_D07.g1_A002 Dark Grown 1 (DG1... 185 6e-046
gb|CF480279.1|CF480279 POL1_64_F12.g1_A002 Pollen Sorghum b... 185 6e-046
gb|CW247562.1|CW247562 104_708_11221843_116_35017_070 Sorgh... 183 2e-045
gb|CN128942.1|CN128942 RHOH1_32_C05.g1_A002 Acid- and alkal... 182 5e-045
gb|CN128863.1|CN128863 RHOH1_32_C05.b1_A002 Acid- and alkal... 180 2e-044
gb|CW184571.1|CW184571 104_600_11165220_116_36688_034 Sorgh... 178 7e-044
gb|CF427166.1|CF427166 PH1_4_H04.b1_A002 Phosphorous-defici... 176 2e-043
gb|BE360322.1|BE360322 DG1_62_C12.g1_A002 Dark Grown 1 (DG1... 174 1e-042
gb|CW265394.1|CW265394 104_734_11231851_148_35263_070 Sorgh... 142 1e-041
gb|BG103195.1|BG103195 RHIZ2_19_D03.g1_A003 Rhizome2 (RHIZ2... 162 3e-039
gb|BG103368.1|BG103368 RHIZ2_19_D03.b1_A003 Rhizome2 (RHIZ2... 162 3e-039
gb|CN127149.1|CN127149 RHOH1_21_G07.b1_A002 Acid- and alkal... 138 1e-038
gb|CN146340.1|CN146340 WOUND1_39_D11.g1_A002 Wounded leaves... 156 3e-037
gb|CX612853.1|CX612853 GABR1_4_G09.g1_A002 GA- or brassinol... 152 5e-036
gb|BG557655.1|BG557655 EM1_54_G11.g1_A002 Embryo 1 (EM1) So... 150 2e-035
gb|BE360918.1|BE360918 DG1_67_F09.g1_A002 Dark Grown 1 (DG1... 149 3e-035
gb|BE361254.1|BE361254 DG1_70_D12.g1_A002 Dark Grown 1 (DG1... 148 9e-035
gb|CD229128.1|CD229128 CCC1_13_F11.b1_A007 Callus culture/c... 147 2e-034
gb|CD462503.1|CD462503 ETH1_38_E02.b1_A002 Ethylene-treated... 141 8e-033
gb|CN138077.1|CN138077 OX1_61_C04.g1_A002 Oxidatively-stres... 139 4e-032
gb|CX609214.1|CX609214 ANR1_11_G12.b1_A002 Anaerobic roots ... 138 1e-031
gb|CN137417.1|CN137417 OX1_57_D04.b1_A002 Oxidatively-stres... 137 2e-031
gb|CW180236.1|CW180236 104_594_11160530_116_36635_003 Sorgh... 136 2e-031
gb|CN127238.1|CN127238 RHOH1_21_G07.g3_A002 Acid- and alkal... 136 3e-031
gb|CW463139.1|CW463139 fsbb001f211j12f0 Sorghum methylation... 133 2e-030
gb|BG559614.1|BG559614 RHIZ2_71_B07.g1_A003 Rhizome2 (RHIZ2... 131 1e-029
gb|CD430220.1|CD430220 ETH1_17_C09.g1_A002 Ethylene-treated... 112 2e-029
gb|BE363151.1|BE363151 DG1_9_E08.g1_A002 Dark Grown 1 (DG1)... 130 2e-029
gb|AW923175.1|AW923175 DG1_49_A09.g1_A002 Dark Grown 1 (DG1... 126 4e-028
gb|CX609300.1|CX609300 ANR1_11_G12.g1_A002 Anaerobic roots ... 125 7e-028
gb|CN132666.1|CN132666 OX1_7_B07.g1_A002 Oxidatively-stress... 123 2e-027
gb|AW282821.1|AW282821 LG1_305_H12.g1_A002 Light Grown 1 (L... 118 6e-026
gb|CF428636.1|CF428636 PH1_9_G09.g1_A002 Phosphorous-defici... 104 3e-025
gb|CW249842.1|CW249842 104_711_11223062_148_35048_051 Sorgh... 113 3e-024
gb|BG466056.1|BG466056 RHIZ2_48_A08.g1_A003 Rhizome2 (RHIZ2... 112 4e-024
gb|BE361185.1|BE361185 DG1_70_D12.b1_A002 Dark Grown 1 (DG1... 111 7e-024
gb|BG465826.1|BG465826 RHIZ2_45_A09.g1_A003 Rhizome2 (RHIZ2... 111 1e-023
gb|BI099425.1|BI099425 IP1_41_H11.g1_A002 Immature pannicle... 108 9e-023
gb|BE125749.1|BE125749 DG1_55_H11.b1_A002 Dark Grown 1 (DG1... 107 1e-022
gb|CD430207.1|CD430207 ETH1_17_H03.g1_A002 Ethylene-treated... 105 6e-022
gb|BI351083.1|BI351083 IP1_69_F01.g1_A002 Immature pannicle... 102 5e-021
gb|BE360832.1|BE360832 DG1_67_F09.b2_A002 Dark Grown 1 (DG1... 101 8e-021
>gb|BZ628758.1|BZ628758 ih62b02.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih62b02 5', DNA sequence
Length = 564
Score = 257 bits (556), Expect = 1e-067
Identities = 108/124 (87%), Positives = 114/124 (91%)
Frame = -2 / -1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E AGVA KVDFREGPAL LD LLADEAN GAFDFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 486 ESAGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADKPNYVRYHEQLLRLVRVGG 307
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
+IVYDNTLW GTVA+PPETPM+D+DRRFSAAI+DLNVRLS DERVEVCQLAIADG+TICR
Sbjct: 306 SIVYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKDERVEVCQLAIADGITICR 127
Query: 238 RLV* 227
RLV*
Sbjct: 126 RLV* 115
Score = 159 bits (341), Expect = 4e-038
Identities = 79/126 (62%), Positives = 83/126 (65%)
Frame = +3 / +2
Query: 222 LHQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSV 401
+HQTRRRQMV PSAMAS QTSTRSS + TLRSL+AAENL S S MGVSGG ATVP SV
Sbjct: 110 VHQTRRRQMVMPSAMASWQTSTRSSLDSLTLRSLIAAENLRSRSFMGVSGGNATVPAHSV 289
Query: 402 LSYTMVPPTRTRRSSCSW*LK*LGLSASTXXXXXXXXXXXXXXXXXXXXXXXXXXKSTLP 581
LSYTM+PPT TRRSSCSW *LGLSAST KSTL
Sbjct: 290 LSYTMLPPTLTRRSSCSWYRT*LGLSASTNAKSNAPWLASSASSASRPSSAGPSRKSTLC 469
Query: 582 ATPARS 599
ATPA S
Sbjct: 470 ATPALS 487
Score = 109 bits (232), Expect(2) = 6e-025
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = +2 / +1
Query: 227 SDEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVV 406
SDEAAA+GDAVGDGEL DL+AL+ + ++EV D REPPV V HGRLR HGP P+RVV
Sbjct: 115 SDEAAADGDAVGDGELADLDALILRQPDIEVLDRRREPPVQVIHGRLRRQRHGPGPQRVV 294
Query: 407 VHDGAADAHQ 436
+HD A HQ
Sbjct: 295 IHDAPAHPHQ 324
Score = 26.7 bits (52), Expect(2) = 6e-025
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 548 QRGALAEVDLARHAGAL 598
QR A EVDL R AGAL
Sbjct: 436 QRRAFPEVDLVRDAGAL 486
>gb|BZ628759.1|BZ628759 ih62b02.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih62b02 5', DNA sequence
Length = 645
Score = 257 bits (556), Expect = 1e-067
Identities = 108/124 (87%), Positives = 114/124 (91%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E AGVA KVDFREGPAL LD LLADEAN GAFDFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 256 ESAGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADKPNYVRYHEQLLRLVRVGG 435
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
+IVYDNTLW GTVA+PPETPM+D+DRRFSAAI+DLNVRLS DERVEVCQLAIADG+TICR
Sbjct: 436 SIVYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKDERVEVCQLAIADGITICR 615
Query: 238 RLV* 227
RLV*
Sbjct: 616 RLV* 627
Score = 159 bits (341), Expect = 4e-038
Identities = 79/126 (62%), Positives = 83/126 (65%)
Frame = +3 / -2
Query: 222 LHQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSV 401
+HQTRRRQMV PSAMAS QTSTRSS + TLRSL+AAENL S S MGVSGG ATVP SV
Sbjct: 632 VHQTRRRQMVMPSAMASWQTSTRSSLDSLTLRSLIAAENLRSRSFMGVSGGNATVPAHSV 453
Query: 402 LSYTMVPPTRTRRSSCSW*LK*LGLSASTXXXXXXXXXXXXXXXXXXXXXXXXXXKSTLP 581
LSYTM+PPT TRRSSCSW *LGLSAST KSTL
Sbjct: 452 LSYTMLPPTLTRRSSCSWYRT*LGLSASTNAKSNAPWLASSASSASRPSSAGPSRKSTLC 273
Query: 582 ATPARS 599
ATPA S
Sbjct: 272 ATPALS 255
Score = 109 bits (232), Expect(2) = 6e-025
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = +2 / -1
Query: 227 SDEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVV 406
SDEAAA+GDAVGDGEL DL+AL+ + ++EV D REPPV V HGRLR HGP P+RVV
Sbjct: 627 SDEAAADGDAVGDGELADLDALILRQPDIEVLDRRREPPVQVIHGRLRRQRHGPGPQRVV 448
Query: 407 VHDGAADAHQ 436
+HD A HQ
Sbjct: 447 IHDAPAHPHQ 418
Score = 26.7 bits (52), Expect(2) = 6e-025
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2 / -1
Query: 548 QRGALAEVDLARHAGAL 598
QR A EVDL R AGAL
Sbjct: 306 QRRAFPEVDLVRDAGAL 256
>gb|CW318949.1|CW318949 104_811_11474228_148_35883_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474228, DNA
sequence
Length = 708
Score = 257 bits (556), Expect = 1e-067
Identities = 108/124 (87%), Positives = 114/124 (91%)
Frame = -2 / -2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E AGVA KVDFREGPAL LD LLADEAN GAFDFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 545 ESAGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADKPNYVRYHEQLLRLVRVGG 366
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
+IVYDNTLW GTVA+PPETPM+D+DRRFSAAI+DLNVRLS DERVEVCQLAIADG+TICR
Sbjct: 365 SIVYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKDERVEVCQLAIADGITICR 186
Query: 238 RLV* 227
RLV*
Sbjct: 185 RLV* 174
Score = 159 bits (341), Expect = 4e-038
Identities = 79/126 (62%), Positives = 83/126 (65%)
Frame = +3 / +1
Query: 222 LHQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSV 401
+HQTRRRQMV PSAMAS QTSTRSS + TLRSL+AAENL S S MGVSGG ATVP SV
Sbjct: 169 VHQTRRRQMVMPSAMASWQTSTRSSLDSLTLRSLIAAENLRSRSFMGVSGGNATVPAHSV 348
Query: 402 LSYTMVPPTRTRRSSCSW*LK*LGLSASTXXXXXXXXXXXXXXXXXXXXXXXXXXKSTLP 581
LSYTM+PPT TRRSSCSW *LGLSAST KSTL
Sbjct: 349 LSYTMLPPTLTRRSSCSWYRT*LGLSASTNAKSNAPWLASSASSASRPSSAGPSRKSTLC 528
Query: 582 ATPARS 599
ATPA S
Sbjct: 529 ATPALS 546
Score = 109 bits (232), Expect(2) = 6e-025
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = +2 / +3
Query: 227 SDEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVV 406
SDEAAA+GDAVGDGEL DL+AL+ + ++EV D REPPV V HGRLR HGP P+RVV
Sbjct: 174 SDEAAADGDAVGDGELADLDALILRQPDIEVLDRRREPPVQVIHGRLRRQRHGPGPQRVV 353
Query: 407 VHDGAADAHQ 436
+HD A HQ
Sbjct: 354 IHDAPAHPHQ 383
Score = 26.7 bits (52), Expect(2) = 6e-025
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2 / +3
Query: 548 QRGALAEVDLARHAGAL 598
QR A EVDL R AGAL
Sbjct: 495 QRRAFPEVDLVRDAGAL 545
>gb|CN146262.1|CN146262 WOUND1_39_D11.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_39_D11_A002 3', mRNA sequence
Length = 713
Score = 257 bits (556), Expect = 1e-067
Identities = 108/124 (87%), Positives = 114/124 (91%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E AGVA KVDFREGPAL LD LLADEAN GAFDFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 109 ESAGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADKPNYVRYHEQLLRLVRVGG 288
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
+IVYDNTLW GTVA+PPETPM+D+DRRFSAAI+DLNVRLS DERVEVCQLAIADG+TICR
Sbjct: 289 SIVYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKDERVEVCQLAIADGITICR 468
Query: 238 RLV* 227
RLV*
Sbjct: 469 RLV* 480
Score = 159 bits (341), Expect = 4e-038
Identities = 79/126 (62%), Positives = 83/126 (65%)
Frame = +3 / -1
Query: 222 LHQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSV 401
+HQTRRRQMV PSAMAS QTSTRSS + TLRSL+AAENL S S MGVSGG ATVP SV
Sbjct: 485 VHQTRRRQMVMPSAMASWQTSTRSSLDSLTLRSLIAAENLRSRSFMGVSGGNATVPAHSV 306
Query: 402 LSYTMVPPTRTRRSSCSW*LK*LGLSASTXXXXXXXXXXXXXXXXXXXXXXXXXXKSTLP 581
LSYTM+PPT TRRSSCSW *LGLSAST KSTL
Sbjct: 305 LSYTMLPPTLTRRSSCSWYRT*LGLSASTNAKSNAPWLASSASSASRPSSAGPSRKSTLC 126
Query: 582 ATPARS 599
ATPA S
Sbjct: 125 ATPALS 108
Score = 109 bits (232), Expect(2) = 6e-025
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = +2 / -3
Query: 227 SDEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVV 406
SDEAAA+GDAVGDGEL DL+AL+ + ++EV D REPPV V HGRLR HGP P+RVV
Sbjct: 480 SDEAAADGDAVGDGELADLDALILRQPDIEVLDRRREPPVQVIHGRLRRQRHGPGPQRVV 301
Query: 407 VHDGAADAHQ 436
+HD A HQ
Sbjct: 300 IHDAPAHPHQ 271
Score = 26.7 bits (52), Expect(2) = 6e-025
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2 / -3
Query: 548 QRGALAEVDLARHAGAL 598
QR A EVDL R AGAL
Sbjct: 159 QRRAFPEVDLVRDAGAL 109
>gb|CX612764.1|CX612764 GABR1_4_G09.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_4_G09_A002 3', mRNA sequence
Length = 661
Score = 255 bits (552), Expect = 3e-067
Identities = 107/122 (87%), Positives = 113/122 (92%)
Frame = -2 / +2
Query: 592 AGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTI 413
AGVA KVDFREGPAL LD LLADEAN GAFDFAFVDADKPNY YHEQLLRLVRVGG+I
Sbjct: 5 AGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADKPNYVRYHEQLLRLVRVGGSI 184
Query: 412 VYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRL 233
VYDNTLW GTVA+PPETPM+D+DRRFSAAI+DLNVRLS DERVEVCQLAIADG+TICRRL
Sbjct: 185 VYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKDERVEVCQLAIADGITICRRL 364
Query: 232 V* 227
V*
Sbjct: 365 V* 370
Score = 158 bits (339), Expect = 8e-038
Identities = 78/124 (62%), Positives = 82/124 (66%)
Frame = +3 / -2
Query: 222 LHQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSV 401
+HQTRRRQMV PSAMAS QTSTRSS + TLRSL+AAENL S S MGVSGG ATVP SV
Sbjct: 375 VHQTRRRQMVMPSAMASWQTSTRSSLDSLTLRSLIAAENLRSRSFMGVSGGNATVPAHSV 196
Query: 402 LSYTMVPPTRTRRSSCSW*LK*LGLSASTXXXXXXXXXXXXXXXXXXXXXXXXXXKSTLP 581
LSYTM+PPT TRRSSCSW *LGLSAST KSTL
Sbjct: 195 LSYTMLPPTLTRRSSCSWYRT*LGLSASTNAKSNAPWLASSASSASRPSSAGPSRKSTLC 16
Query: 582 ATPA 593
ATPA
Sbjct: 15 ATPA 4
Score = 106 bits (227), Expect(2) = 1e-023
Identities = 44/70 (62%), Positives = 53/70 (75%)
Frame = +2 / -1
Query: 227 SDEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVV 406
S+EAAA+GDAVGDGEL DL+AL+ + ++EV D REPPV V HGRLR HGP P+RVV
Sbjct: 370 SNEAAADGDAVGDGELADLDALILRQPDIEVLDRRREPPVQVIHGRLRRQRHGPGPQRVV 191
Query: 407 VHDGAADAHQ 436
+HD A HQ
Sbjct: 190 IHDAPAHPHQ 161
Score = 24.9 bits (48), Expect(2) = 1e-023
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2 / -1
Query: 548 QRGALAEVDLARHAGA 595
QR A EVDL R AGA
Sbjct: 49 QRRAFPEVDLVRDAGA 2
>gb|BG241494.1|BG241494 RHIZ2_50_A05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 526
Score = 254 bits (550), Expect = 6e-067
Identities = 107/122 (87%), Positives = 113/122 (92%)
Frame = -2 / +2
Query: 592 AGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTI 413
AGVA KVDFREGPAL LD LLADEAN GAFDFAFVDADKPNY YHEQLLRLVRVGG+I
Sbjct: 5 AGVAHKVDFREGPALYGLDALLADEANHGAFDFAFVDADKPNYVRYHEQLLRLVRVGGSI 184
Query: 412 VYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRL 233
VYDNTLW GTVA+PPETPM+D+DRRFSAAI+DLNVRLS DERVEVCQLAIADG+TICRRL
Sbjct: 185 VYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKDERVEVCQLAIADGITICRRL 364
Query: 232 V* 227
V*
Sbjct: 365 V* 370
Score = 149 bits (319), Expect(2) = 1e-037
Identities = 70/89 (78%), Positives = 74/89 (83%)
Frame = +3 / -2
Query: 222 LHQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSV 401
+HQTRRRQMV PSAMAS QTSTRSS + TLRSL+AAENL S S MGVSGG ATVP SV
Sbjct: 375 VHQTRRRQMVMPSAMASWQTSTRSSLDSLTLRSLIAAENLRSRSFMGVSGGNATVPAHSV 196
Query: 402 LSYTMVPPTRTRRSSCSW*LK*LGLSAST 488
LSYTM+PPT TRRSSCSW *LGLSAST
Sbjct: 195 LSYTMLPPTLTRRSSCSWYRT*LGLSAST 109
Score = 105 bits (223), Expect = 1e-021
Identities = 43/70 (61%), Positives = 52/70 (74%)
Frame = +2 / -1
Query: 227 SDEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVV 406
SDEAAA+GDAVGDGEL DL+AL+ + ++EV D REPP+ V HGRLR HG P+RVV
Sbjct: 370 SDEAAADGDAVGDGELADLDALILRQPDIEVLDRRREPPIQVIHGRLRRQRHGAGPQRVV 191
Query: 407 VHDGAADAHQ 436
+HD A HQ
Sbjct: 190 IHDAPAHPHQ 161
Score = 28.6 bits (56), Expect(2) = 1e-037
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2 / -1
Query: 548 QRGALAEVDLARHAGA 595
QRGA EVDL R AGA
Sbjct: 49 QRGAFPEVDLVRDAGA 2
>gb|CD236128.1|CD236128 SS1_32_B09.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_32_B09_A012 3', mRNA sequence
Length = 591
Score = 251 bits (542), Expect = 8e-066
Identities = 105/120 (87%), Positives = 111/120 (92%)
Frame = -2 / +3
Query: 586 VAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVY 407
VA KVDFREGPAL LD LLADEAN GAFDFAFVDADKPNY YHEQLLRLVRVGG+IVY
Sbjct: 3 VAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADKPNYVRYHEQLLRLVRVGGSIVY 182
Query: 406 DNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV* 227
DNTLW GTVA+PPETPM+D+DRRFSAAI+DLNVRLS DERVEVCQLAIADG+TICRRLV*
Sbjct: 183 DNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKDERVEVCQLAIADGITICRRLV* 362
Score = 153 bits (328), Expect = 3e-036
Identities = 76/122 (62%), Positives = 80/122 (65%)
Frame = +3 / -3
Query: 222 LHQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSV 401
+HQTRRRQMV PSAMAS QTSTRSS + TLRSL+AAENL S S MGVSGG ATVP SV
Sbjct: 367 VHQTRRRQMVMPSAMASWQTSTRSSLDSLTLRSLIAAENLRSRSFMGVSGGNATVPAHSV 188
Query: 402 LSYTMVPPTRTRRSSCSW*LK*LGLSASTXXXXXXXXXXXXXXXXXXXXXXXXXXKSTLP 581
LSYTM+PPT TRRSSCSW *LGLSAST KSTL
Sbjct: 187 LSYTMLPPTLTRRSSCSWYRT*LGLSASTNAKSNAPWLASSASSASRPSSAGPSRKSTLC 8
Query: 582 AT 587
AT
Sbjct: 7 AT 2
Score = 106 bits (227), Expect = 4e-022
Identities = 44/70 (62%), Positives = 53/70 (75%)
Frame = +2 / -2
Query: 227 SDEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVV 406
S+EAAA+GDAVGDGEL DL+AL+ + ++EV D REPPV V HGRLR HGP P+RVV
Sbjct: 362 SNEAAADGDAVGDGELADLDALILRQPDIEVLDRRREPPVQVIHGRLRRQRHGPGPQRVV 183
Query: 407 VHDGAADAHQ 436
+HD A HQ
Sbjct: 182 IHDAPAHPHQ 153
>gb|CW249841.1|CW249841 104_711_11223062_116_35044_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223062, DNA
sequence
Length = 683
Score = 246 bits (531), Expect = 3e-064
Identities = 104/126 (82%), Positives = 112/126 (88%)
Frame = -2 / -2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
++AGVA KVDFREGPAL +LD LLADEAN GAFDFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 595 DKAGVAHKVDFREGPALEHLDALLADEANHGAFDFAFVDADKPNYVRYHEQLLRLVRVGG 416
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
+VYDNTLW GTVA+PP+ PMSD DRR SAA+RDLN RLSAD RVEVCQLAIADGVTICR
Sbjct: 415 AVVYDNTLWDGTVALPPDAPMSDHDRRISAAVRDLNARLSADPRVEVCQLAIADGVTICR 236
Query: 238 RLV*WS 221
R+V* S
Sbjct: 235 RVV*SS 218
Score = 151 bits (324), Expect = 1e-035
Identities = 76/123 (61%), Positives = 76/123 (61%)
Frame = +3 / +3
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQMVTPSAMAS QTSTR SAERR LRS AAE S SDMG SGG ATVP SVLSY
Sbjct: 228 TTRRQMVTPSAMASWQTSTRGSAERRALRSRTAAEMRRSWSDMGASGGSATVPSHSVLSY 407
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSASTXXXXXXXXXXXXXXXXXXXXXXXXXXKSTLPATP 590
T PPTRTRRSSCSW *LGLSAST KSTL ATP
Sbjct: 408 TTAPPTRTRRSSCSWYRT*LGLSASTKAKSNAPWLASSASSASRCSSAGPSRKSTLCATP 587
Query: 591 ARS 599
A S
Sbjct: 588 ALS 596
Score = 112 bits (239), Expect = 9e-024
Identities = 49/71 (69%), Positives = 55/71 (77%)
Frame = +2 / +2
Query: 227 SDEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVV 406
S +AAA+GDAVGDGEL DL+A VR EA VEV DGG + V VRHGR+ HG P+RVV
Sbjct: 224 SHDAAADGDAVGDGELADLDARVRREAGVEVADGGGDAAVVVRHGRVGRQRHGAVPQRVV 403
Query: 407 VHDGAADAHQA 439
VHDGAADAHQA
Sbjct: 404 VHDGAADAHQA 436
>gb|CW124219.1|CW124219 104_503_11111651_148_34693_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11111651, DNA
sequence
Length = 594
Score = 243 bits (524), Expect = 2e-063
Identities = 101/121 (83%), Positives = 108/121 (89%)
Frame = -2 / -3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
++AGVA KVDFREGPAL +LD LLADEAN GAFDFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 364 DKAGVAHKVDFREGPALEHLDALLADEANHGAFDFAFVDADKPNYVRYHEQLLRLVRVGG 185
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
+VYDNTLW GTVA+PP+ PMSD DRR SAA+RDLN RLSAD RVEVCQLAIADGVTICR
Sbjct: 184 AVVYDNTLWDGTVALPPDAPMSDHDRRISAAVRDLNARLSADPRVEVCQLAIADGVTICR 5
Query: 238 R 236
R
Sbjct: 4 R 2
Score = 149 bits (320), Expect = 3e-035
Identities = 75/121 (61%), Positives = 75/121 (61%)
Frame = +3 / +3
Query: 237 RRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSYTM 416
RRQMVTPSAMAS QTSTR SAERR LRS AAE S SDMG SGG ATVP SVLSYT
Sbjct: 3 RRQMVTPSAMASWQTSTRGSAERRALRSRTAAEMRRSWSDMGASGGSATVPSHSVLSYTT 182
Query: 417 VPPTRTRRSSCSW*LK*LGLSASTXXXXXXXXXXXXXXXXXXXXXXXXXXKSTLPATPAR 596
PPTRTRRSSCSW *LGLSAST KSTL ATPA
Sbjct: 183 APPTRTRRSSCSWYRT*LGLSASTKAKSNAPWLASSASSASRCSSAGPSRKSTLCATPAL 362
Query: 597 S 599
S
Sbjct: 363 S 365
Score = 110 bits (234), Expect = 4e-023
Identities = 48/68 (70%), Positives = 53/68 (77%)
Frame = +2 / +2
Query: 236 AAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVVVHD 415
AAA+GDAVGDGEL DL+A VR EA VEV DGG + V VRHGR+ HG P+RVVVHD
Sbjct: 2 AAADGDAVGDGELADLDARVRREAGVEVADGGGDAAVVVRHGRVGRQRHGAVPQRVVVHD 181
Query: 416 GAADAHQA 439
GAADAHQA
Sbjct: 182 GAADAHQA 205
>gb|CL177459.1|CL177459 104_384_10893845_116_31916_293 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10893845, DNA
sequence
Length = 545
Score = 215 bits (464), Expect = 5e-055
Identities = 88/99 (88%), Positives = 94/99 (94%)
Frame = -2 / +3
Query: 523 DEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDID 344
DEAN GAFDFAFVDADKPNY YHEQLLRLVRVGG+IVYDNTLW GTVA+PPETPM+D+D
Sbjct: 3 DEANHGAFDFAFVDADKPNYVRYHEQLLRLVRVGGSIVYDNTLWAGTVALPPETPMNDLD 182
Query: 343 RRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV* 227
RRFSAAI+DLNVRLS DERVEVCQLAIADG+TICRRLV*
Sbjct: 183 RRFSAAIKDLNVRLSKDERVEVCQLAIADGITICRRLV* 299
Score = 149 bits (319), Expect = 5e-035
Identities = 70/89 (78%), Positives = 74/89 (83%)
Frame = +3 / -2
Query: 222 LHQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSV 401
+HQTRRRQMV PSAMAS QTSTRSS + TLRSL+AAENL S S MGVSGG ATVP SV
Sbjct: 304 VHQTRRRQMVMPSAMASWQTSTRSSLDSLTLRSLIAAENLRSRSFMGVSGGNATVPAHSV 125
Query: 402 LSYTMVPPTRTRRSSCSW*LK*LGLSAST 488
LSYTM+PPT TRRSSCSW *LGLSAST
Sbjct: 124 LSYTMLPPTLTRRSSCSWYRT*LGLSAST 38
Score = 109 bits (232), Expect = 8e-023
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = +2 / -1
Query: 227 SDEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVV 406
SDEAAA+GDAVGDGEL DL+AL+ + ++EV D REPPV V HGRLR HGP P+RVV
Sbjct: 299 SDEAAADGDAVGDGELADLDALILRQPDIEVLDRRREPPVQVIHGRLRRQRHGPGPQRVV 120
Query: 407 VHDGAADAHQ 436
+HD A HQ
Sbjct: 119 IHDAPAHPHQ 90
>gb|BG101966.1|BG101966 RHIZ2_22_A05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 546
Score = 208 bits (449), Expect(2) = 4e-053
Identities = 85/96 (88%), Positives = 91/96 (94%)
Frame = -2 / +1
Query: 514 NLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRF 335
N GAFDFAFVDADKPNY YHEQLLRLVRVGG+IVYDNTLW GTVA+PPETPM+D+DRRF
Sbjct: 1 NHGAFDFAFVDADKPNYVRYHEQLLRLVRVGGSIVYDNTLWAGTVALPPETPMNDLDRRF 180
Query: 334 SAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV* 227
SAAI+DLNVRLS DERVEVCQLAIADG+TICRRLV*
Sbjct: 181 SAAIKDLNVRLSKDERVEVCQLAIADGITICRRLV* 288
Score = 149 bits (319), Expect = 5e-035
Identities = 70/89 (78%), Positives = 74/89 (83%)
Frame = +3 / -2
Query: 222 LHQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSV 401
+HQTRRRQMV PSAMAS QTSTRSS + TLRSL+AAENL S S MGVSGG ATVP SV
Sbjct: 293 VHQTRRRQMVMPSAMASWQTSTRSSLDSLTLRSLIAAENLRSRSFMGVSGGNATVPAHSV 114
Query: 402 LSYTMVPPTRTRRSSCSW*LK*LGLSAST 488
LSYTM+PPT TRRSSCSW *LGLSAST
Sbjct: 113 LSYTMLPPTLTRRSSCSWYRT*LGLSAST 27
Score = 105 bits (223), Expect = 1e-021
Identities = 43/70 (61%), Positives = 52/70 (74%)
Frame = +2 / -1
Query: 227 SDEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVV 406
SDEAAA+GDAVGDGEL DL+AL+ + ++EV D REPP+ V HGRLR HG P+RVV
Sbjct: 288 SDEAAADGDAVGDGELADLDALILRQPDIEVLDRRREPPIQVIHGRLRRQRHGAGPQRVV 109
Query: 407 VHDGAADAHQ 436
+HD A HQ
Sbjct: 108 IHDAPAHPHQ 79
Score = 22.1 bits (42), Expect(2) = 4e-053
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1 / +2
Query: 92 FFFHFWSWERQVDRSCVHLCSL 27
FFF F + DRSC+ + L
Sbjct: 476 FFFFFAIQAIEFDRSCISVLCL 541
>gb|CN137489.1|CN137489 OX1_57_D04.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_57_D04_A002 5', mRNA sequence
Length = 786
Score = 205 bits (442), Expect = 5e-052
Identities = 85/99 (85%), Positives = 90/99 (90%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E AGVA KVDFREGPAL LD LLADEAN GAFDFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 488 ESAGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADKPNYVRYHEQLLRLVRVGG 667
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRL 302
+IVYDNTLW GTVA+PPETPM+D+DRRFSAAI+DLNVRL
Sbjct: 668 SIVYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRL 784
Score = 112 bits (240), Expect = 4e-024
Identities = 57/97 (58%), Positives = 59/97 (60%)
Frame = +3 / -1
Query: 309 TLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSYTMVPPTRTRRSSCSW*LK*LGLSAST 488
TLRSL+AAENL S S MGVSGG ATVP SVLSYTM+PPT TRRSSCSW *LGLSAST
Sbjct: 777 TLRSLIAAENLRSRSFMGVSGGNATVPAHSVLSYTMLPPTLTRRSSCSWYRT*LGLSAST 598
Query: 489 XXXXXXXXXXXXXXXXXXXXXXXXXXKSTLPATPARS 599
KSTL ATPA S
Sbjct: 597 NAKSNAPWLASSASSASRPSSAGPSRKSTLCATPALS 487
>gb|BE363001.2|BE363001 DG1_92_G01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 519
Score = 204 bits (440), Expect = 1e-051
Identities = 83/93 (89%), Positives = 89/93 (95%)
Frame = -2 / +1
Query: 505 AFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAA 326
AFDFAFVDADKPNY YHEQLLRLVRVGG+IVYDNTLW GTVA+PPETPM+D+DRRFSAA
Sbjct: 1 AFDFAFVDADKPNYVRYHEQLLRLVRVGGSIVYDNTLWAGTVALPPETPMNDLDRRFSAA 180
Query: 325 IRDLNVRLSADERVEVCQLAIADGVTICRRLV* 227
I+DLNVRLS DERVEVCQLAIADG+TICRRLV*
Sbjct: 181 IKDLNVRLSKDERVEVCQLAIADGITICRRLV* 279
Score = 149 bits (319), Expect = 5e-035
Identities = 70/89 (78%), Positives = 74/89 (83%)
Frame = +3 / -2
Query: 222 LHQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSV 401
+HQTRRRQMV PSAMAS QTSTRSS + TLRSL+AAENL S S MGVSGG ATVP SV
Sbjct: 284 VHQTRRRQMVMPSAMASWQTSTRSSLDSLTLRSLIAAENLRSRSFMGVSGGNATVPAHSV 105
Query: 402 LSYTMVPPTRTRRSSCSW*LK*LGLSAST 488
LSYTM+PPT TRRSSCSW *LGLSAST
Sbjct: 104 LSYTMLPPTLTRRSSCSWYRT*LGLSAST 18
Score = 109 bits (232), Expect = 8e-023
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = +2 / -1
Query: 227 SDEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVV 406
SDEAAA+GDAVGDGEL DL+AL+ + ++EV D REPPV V HGRLR HGP P+RVV
Sbjct: 279 SDEAAADGDAVGDGELADLDALILRQPDIEVLDRRREPPVQVIHGRLRRQRHGPGPQRVV 100
Query: 407 VHDGAADAHQ 436
+HD A HQ
Sbjct: 99 IHDAPAHPHQ 70
>gb|BG356843.1|BG356843 OV2_10_F11.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 541
Score = 187 bits (402), Expect = 2e-046
Identities = 76/129 (58%), Positives = 97/129 (75%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD+L+ADE N G+FDF FVDADK NY NYH++LL+LV++GG
Sbjct: 43 EKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLLKLVKLGG 222
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V +P + PM R + + LN L+ADERVE+CQL + DGVT+CR
Sbjct: 223 LIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADERVEICQLPVGDGVTLCR 402
Query: 238 RLV*WSQCV 212
R+ * C+
Sbjct: 403 RVK*KKTCL 429
>gb|CD429550.1|CD429550 ETH1_14_C02.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_14_C02_A002 3', mRNA sequence
Length = 604
Score = 187 bits (402), Expect = 2e-046
Identities = 76/129 (58%), Positives = 97/129 (75%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD+L+ADE N G+FDF FVDADK NY NYH++LL+LV++GG
Sbjct: 9 EKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLLKLVKLGG 188
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V +P + PM R + + LN L+ADERVE+CQL + DGVT+CR
Sbjct: 189 LIGYDNTLWNGSVVLPDDAPMRKYVRFYRDFVLVLNKALAADERVEICQLPVGDGVTLCR 368
Query: 238 RLV*WSQCV 212
R+ * C+
Sbjct: 369 RVK*KKTCL 395
>gb|CN137990.1|CN137990 OX1_61_C04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_61_C04_A002 3', mRNA sequence
Length = 716
Score = 187 bits (402), Expect = 2e-046
Identities = 76/129 (58%), Positives = 97/129 (75%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD+L+ADE N G+FDF FVDADK NY NYH++LL+LV++GG
Sbjct: 51 EKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLLKLVKLGG 230
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V +P + PM R + + LN L+ADERVE+CQL + DGVT+CR
Sbjct: 231 LIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADERVEICQLPVGDGVTLCR 410
Query: 238 RLV*WSQCV 212
R+ * C+
Sbjct: 411 RVK*KKTCL 437
>gb|BG559195.1|BG559195 RHIZ2_55_G08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 449
Score = 186 bits (400), Expect = 3e-046
Identities = 75/122 (61%), Positives = 94/122 (77%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD+L+ADE N G+FDF FVDADK NY NYHE+LL+LV++GG
Sbjct: 79 EKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHERLLKLVKLGG 258
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V +P + PM R + + LN L+ADERVE+CQL + DGVT+CR
Sbjct: 259 LIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADERVEICQLPVGDGVTLCR 438
Query: 238 RL 233
R+
Sbjct: 439 RV 444
>gb|CW180237.1|CW180237 104_594_11160530_148_36631_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11160530, DNA
sequence
Length = 742
Score = 185 bits (398), Expect = 6e-046
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = -2 / -3
Query: 481 ADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRL 302
ADKPNY YHEQLLRLVRVGG+IVYDNTLW GTVA+PPETPM+D+DRRFSAAI+DLNVRL
Sbjct: 740 ADKPNYVRYHEQLLRLVRVGGSIVYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRL 561
Query: 301 SADERVEVCQLAIADGVTICRRLV* 227
S DERVEVCQLAIADG+TICRRLV*
Sbjct: 560 SKDERVEVCQLAIADGITICRRLV* 486
Score = 144 bits (310), Expect = 8e-034
Identities = 68/87 (78%), Positives = 72/87 (82%)
Frame = +3 / +1
Query: 222 LHQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSV 401
+HQTRRRQMV PSAMAS QTSTRSS + TLRSL+AAENL S S MGVSGG ATVP SV
Sbjct: 481 VHQTRRRQMVMPSAMASWQTSTRSSLDSLTLRSLIAAENLRSRSFMGVSGGNATVPAHSV 660
Query: 402 LSYTMVPPTRTRRSSCSW*LK*LGLSA 482
LSYTM+PPT TRRSSCSW *LGLSA
Sbjct: 661 LSYTMLPPTLTRRSSCSWYRT*LGLSA 741
Score = 109 bits (232), Expect = 8e-023
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = +2 / +3
Query: 227 SDEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVV 406
SDEAAA+GDAVGDGEL DL+AL+ + ++EV D REPPV V HGRLR HGP P+RVV
Sbjct: 486 SDEAAADGDAVGDGELADLDALILRQPDIEVLDRRREPPVQVIHGRLRRQRHGPGPQRVV 665
Query: 407 VHDGAADAHQ 436
+HD A HQ
Sbjct: 666 IHDAPAHPHQ 695
>gb|BE356814.1|BE356814 DG1_12_D07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 592
Score = 185 bits (398), Expect = 6e-046
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = -2 / +3
Query: 481 ADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRL 302
ADKPNY YHEQLLRLVRVGG+IVYDNTLW GTVA+PPETPM+D+DRRFSAAI+DLNVRL
Sbjct: 3 ADKPNYVRYHEQLLRLVRVGGSIVYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRL 182
Query: 301 SADERVEVCQLAIADGVTICRRLV* 227
S DERVEVCQLAIADG+TICRRLV*
Sbjct: 183 SKDERVEVCQLAIADGITICRRLV* 257
Score = 144 bits (310), Expect = 8e-034
Identities = 68/87 (78%), Positives = 72/87 (82%)
Frame = +3 / -1
Query: 222 LHQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSV 401
+HQTRRRQMV PSAMAS QTSTRSS + TLRSL+AAENL S S MGVSGG ATVP SV
Sbjct: 262 VHQTRRRQMVMPSAMASWQTSTRSSLDSLTLRSLIAAENLRSRSFMGVSGGNATVPAHSV 83
Query: 402 LSYTMVPPTRTRRSSCSW*LK*LGLSA 482
LSYTM+PPT TRRSSCSW *LGLSA
Sbjct: 82 LSYTMLPPTLTRRSSCSWYRT*LGLSA 2
Score = 109 bits (232), Expect = 8e-023
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = +2 / -3
Query: 227 SDEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVV 406
SDEAAA+GDAVGDGEL DL+AL+ + ++EV D REPPV V HGRLR HGP P+RVV
Sbjct: 257 SDEAAADGDAVGDGELADLDALILRQPDIEVLDRRREPPVQVIHGRLRRQRHGPGPQRVV 78
Query: 407 VHDGAADAHQ 436
+HD A HQ
Sbjct: 77 IHDAPAHPHQ 48
>gb|CF480279.1|CF480279 POL1_64_F12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_F12_A002 5', mRNA sequence
Length = 649
Score = 185 bits (398), Expect = 6e-046
Identities = 75/129 (58%), Positives = 96/129 (74%)
Frame = -2 / -3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD+L+ADE N G+FDF FVDADK NY NYH++LL+L ++GG
Sbjct: 596 EKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLLKLAKLGG 417
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V +P + PM R + + LN L+ADERVE+CQL + DGVT+CR
Sbjct: 416 LIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADERVEICQLPVGDGVTLCR 237
Query: 238 RLV*WSQCV 212
R+ * C+
Sbjct: 236 RVK*KKTCL 210
>gb|CW247562.1|CW247562 104_708_11221843_116_35017_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221843, DNA
sequence
Length = 570
Score = 183 bits (394), Expect = 2e-045
Identities = 79/123 (64%), Positives = 94/123 (76%)
Frame = -2 / -2
Query: 595 RAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGT 416
RAGVA KVDFREG A +LD LLA E+NLGAFDFAFVDADK +Y YHE+LLRLV VGG
Sbjct: 461 RAGVAHKVDFREGLASEHLDALLAAESNLGAFDFAFVDADKESYGGYHERLLRLVLVGGV 282
Query: 415 IVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRR 236
+ YDNTLW G+VA P + P++D DR IR N ++AD RVEV QL +ADG+T+CRR
Sbjct: 281 LAYDNTLWGGSVAFPDDAPLTDDDREVRDHIRAFNAVIAADARVEVVQLPVADGITLCRR 102
Query: 235 LV* 227
+V*
Sbjct: 101 VV* 93
>gb|CN128942.1|CN128942 RHOH1_32_C05.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_32_C05_A002 5', mRNA sequence
Length = 826
Score = 182 bits (391), Expect = 5e-045
Identities = 73/122 (59%), Positives = 93/122 (76%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD+L+ADE N G+FDF FVDADK NY NYH++LL+LV++GG
Sbjct: 404 EKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLLKLVKLGG 583
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V +P + PM R + + LN L+ADERVE+CQL + D VT+CR
Sbjct: 584 LIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADERVEICQLPVGDSVTLCR 763
Query: 238 RL 233
R+
Sbjct: 764 RV 769
>gb|CN128863.1|CN128863 RHOH1_32_C05.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_32_C05_A002 3', mRNA sequence
Length = 752
Score = 180 bits (387), Expect = 2e-044
Identities = 73/122 (59%), Positives = 93/122 (76%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD+L+ADE N G+FDF FVDADK NY NYH++LL+LV++GG
Sbjct: 158 EKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLLKLVKLGG 337
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V +P + PM R + + LN L+ADERVE+ QL + DGVT+CR
Sbjct: 338 LIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADERVEISQLPVGDGVTLCR 517
Query: 238 RL 233
R+
Sbjct: 518 RV 523
>gb|CW184571.1|CW184571 104_600_11165220_116_36688_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11165220, DNA
sequence
Length = 640
Score = 178 bits (383), Expect = 7e-044
Identities = 72/82 (87%), Positives = 78/82 (95%)
Frame = -2 / -2
Query: 472 PNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSAD 293
PNY YHEQLLRLVRVGG+IVYDNTLW GTVA+PPETPM+D+DRRFSAAI+DLNVRLS D
Sbjct: 639 PNYVRYHEQLLRLVRVGGSIVYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKD 460
Query: 292 ERVEVCQLAIADGVTICRRLV* 227
ERVEVCQLAIADG+TICRRLV*
Sbjct: 459 ERVEVCQLAIADGITICRRLV* 394
Score = 139 bits (298), Expect = 4e-032
Identities = 65/84 (77%), Positives = 69/84 (82%)
Frame = +3 / +2
Query: 222 LHQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSV 401
+HQTRRRQMV PSAMAS QTSTRSS + TLRSL+AAENL S S MGVSGG ATVP SV
Sbjct: 389 VHQTRRRQMVMPSAMASWQTSTRSSLDSLTLRSLIAAENLRSRSFMGVSGGNATVPAHSV 568
Query: 402 LSYTMVPPTRTRRSSCSW*LK*LG 473
LSYTM+PPT TRRSSCSW *LG
Sbjct: 569 LSYTMLPPTLTRRSSCSWYRT*LG 640
Score = 109 bits (232), Expect = 8e-023
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = +2 / +1
Query: 227 SDEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVV 406
SDEAAA+GDAVGDGEL DL+AL+ + ++EV D REPPV V HGRLR HGP P+RVV
Sbjct: 394 SDEAAADGDAVGDGELADLDALILRQPDIEVLDRRREPPVQVIHGRLRRQRHGPGPQRVV 573
Query: 407 VHDGAADAHQ 436
+HD A HQ
Sbjct: 574 IHDAPAHPHQ 603
>gb|CF427166.1|CF427166 PH1_4_H04.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_4_H04_A002 3', mRNA sequence
Length = 573
Score = 176 bits (379), Expect = 2e-043
Identities = 71/122 (58%), Positives = 91/122 (74%)
Frame = -2 / +2
Query: 577 KVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNT 398
K+DFREGPAL LD+L+ADE N G+FDF FVDADK NY NYH++LL+LV++GG I YDNT
Sbjct: 5 KIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLLKLVKLGGLIGYDNT 184
Query: 397 LWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WSQ 218
LW G+V +P + PM R + + LN L+ADERVE+CQL + DGVT+CRR+ *
Sbjct: 185 LWNGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADERVEICQLPVGDGVTLCRRVK*KKT 364
Query: 217 CV 212
C+
Sbjct: 365 CL 370
>gb|BE360322.1|BE360322 DG1_62_C12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 572
Score = 174 bits (374), Expect = 1e-042
Identities = 70/121 (57%), Positives = 90/121 (74%)
Frame = -2 / +1
Query: 574 VDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTL 395
+DFREGPAL LD+L+ADE N G+FDF FVDADK NY NYH++LL+LV++GG I YDNTL
Sbjct: 1 IDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLLKLVKLGGLIGYDNTL 180
Query: 394 WCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WSQC 215
W G+V +P + PM R + + LN L+ADERVE+CQL + DGVT+CRR+ * C
Sbjct: 181 WNGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADERVEICQLPVGDGVTLCRRVK*KKTC 360
Query: 214 V 212
+
Sbjct: 361 L 363
>gb|CW265394.1|CW265394 104_734_11231851_148_35263_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11231851, DNA
sequence
Length = 649
Score = 142 bits (305), Expect(2) = 1e-041
Identities = 57/103 (55%), Positives = 74/103 (71%)
Frame = -2 / -1
Query: 520 EANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDR 341
E N G+FDF FVDADK NY NYH++LL+LV++GG I YDNTLW G+V +P + PM R
Sbjct: 445 EKNHGSFDFVFVDADKDNYLNYHDRLLKLVKLGGLIGYDNTLWNGSVVLPDDAPMRKYIR 266
Query: 340 RFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WSQCV 212
+ + LN L+ADERVE+CQL + DGVT+CRR+ * C+
Sbjct: 265 FYRDFVLVLNKALAADERVEICQLPVGDGVTLCRRVK*KKTCL 137
Score = 48.7 bits (100), Expect(2) = 1e-041
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -2 / -1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEAN 512
E+AGVA K+DFREGPAL LD+L+AD N
Sbjct: 604 EKAGVAHKIDFREGPALPVLDDLIADVRN 518
>gb|BG103195.1|BG103195 RHIZ2_19_D03.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 359
Score = 162 bits (349), Expect = 3e-039
Identities = 67/75 (89%), Positives = 73/75 (97%)
Frame = -2 / +2
Query: 451 EQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQ 272
EQLLRLVRVGG+IVYDNTLW GTVA+PPETPM+D+DRRFSAAI+DLNVRLS DERVEVCQ
Sbjct: 2 EQLLRLVRVGGSIVYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKDERVEVCQ 181
Query: 271 LAIADGVTICRRLV* 227
LAIADG+TICRRLV*
Sbjct: 182 LAIADGITICRRLV* 226
Score = 132 bits (283), Expect = 4e-030
Identities = 61/77 (79%), Positives = 65/77 (84%)
Frame = +3 / -3
Query: 222 LHQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSV 401
+HQTRRRQMV PSAMAS QTSTRSS + TLRSL+AAENL S S MGVSGG ATVP SV
Sbjct: 231 VHQTRRRQMVMPSAMASWQTSTRSSLDSLTLRSLIAAENLRSRSFMGVSGGNATVPAHSV 52
Query: 402 LSYTMVPPTRTRRSSCS 452
LSYTM+PPT TRRSSCS
Sbjct: 51 LSYTMLPPTLTRRSSCS 1
Score = 105 bits (223), Expect = 1e-021
Identities = 43/70 (61%), Positives = 52/70 (74%)
Frame = +2 / -2
Query: 227 SDEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVV 406
SDEAAA+GDAVGDGEL DL+AL+ + ++EV D REPP+ V HGRLR HG P+RVV
Sbjct: 226 SDEAAADGDAVGDGELADLDALILRQPDIEVLDRRREPPIQVIHGRLRRQRHGAGPQRVV 47
Query: 407 VHDGAADAHQ 436
+HD A HQ
Sbjct: 46 IHDAPAHPHQ 17
>gb|BG103368.1|BG103368 RHIZ2_19_D03.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 411
Score = 162 bits (349), Expect = 3e-039
Identities = 67/75 (89%), Positives = 73/75 (97%)
Frame = -2 / +2
Query: 451 EQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQ 272
EQLLRLVRVGG+IVYDNTLW GTVA+PPETPM+D+DRRFSAAI+DLNVRLS DERVEVCQ
Sbjct: 2 EQLLRLVRVGGSIVYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKDERVEVCQ 181
Query: 271 LAIADGVTICRRLV* 227
LAIADG+TICRRLV*
Sbjct: 182 LAIADGITICRRLV* 226
Score = 132 bits (283), Expect = 4e-030
Identities = 61/77 (79%), Positives = 65/77 (84%)
Frame = +3 / -1
Query: 222 LHQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSV 401
+HQTRRRQMV PSAMAS QTSTRSS + TLRSL+AAENL S S MGVSGG ATVP SV
Sbjct: 231 VHQTRRRQMVMPSAMASWQTSTRSSLDSLTLRSLIAAENLRSRSFMGVSGGNATVPAHSV 52
Query: 402 LSYTMVPPTRTRRSSCS 452
LSYTM+PPT TRRSSCS
Sbjct: 51 LSYTMLPPTLTRRSSCS 1
Score = 105 bits (223), Expect = 1e-021
Identities = 43/70 (61%), Positives = 52/70 (74%)
Frame = +2 / -3
Query: 227 SDEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVV 406
SDEAAA+GDAVGDGEL DL+AL+ + ++EV D REPP+ V HGRLR HG P+RVV
Sbjct: 226 SDEAAADGDAVGDGELADLDALILRQPDIEVLDRRREPPIQVIHGRLRRQRHGAGPQRVV 47
Query: 407 VHDGAADAHQ 436
+HD A HQ
Sbjct: 46 IHDAPAHPHQ 17
>gb|CN127149.1|CN127149 RHOH1_21_G07.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_G07_A002 3', mRNA sequence
Length = 819
Score = 138 bits (297), Expect(2) = 1e-038
Identities = 57/97 (58%), Positives = 72/97 (74%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD+L+ADE + G+FDF FVDADK NY NYH++LL+LV++GG
Sbjct: 176 EKAGVAHKIDFREGPALPVLDDLIADEKDHGSFDFVFVDADKDNYLNYHDRLLKLVKLGG 355
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNV 308
I YDNTLW G+V +P + PM R + I L V
Sbjct: 356 LIGYDNTLWNGSVVLPDDAPMRKYIRFYRVEICQLPV 466
Score = 41.8 bits (85), Expect(2) = 1e-038
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2 / +2
Query: 289 RVEVCQLAIADGVTICRRLV*WSQCV 212
RVE+CQL + DGVT+CRR+ * C+
Sbjct: 440 RVEICQLPVGDGVTLCRRVK*KKTCL 517
>gb|CN146340.1|CN146340 WOUND1_39_D11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_39_D11_A002 5', mRNA sequence
Length = 719
Score = 156 bits (335), Expect = 3e-037
Identities = 65/76 (85%), Positives = 67/76 (88%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E AGVA KVDFREGPAL LD LLADEAN GAFDFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 490 ESAGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADKPNYVRYHEQLLRLVRVGG 669
Query: 418 TIVYDNTLWCGTVAMP 371
+IVYDNTLW GTVA+P
Sbjct: 670 SIVYDNTLWAGTVALP 717
>gb|CX612853.1|CX612853 GABR1_4_G09.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_4_G09_A002 5', mRNA sequence
Length = 732
Score = 152 bits (326), Expect = 5e-036
Identities = 64/76 (84%), Positives = 66/76 (86%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E AGVA KVDFREGPAL LD LLADEAN GAFDFAFVDAD PNY YHEQLLRLVRVGG
Sbjct: 504 ESAGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDAD*PNYVRYHEQLLRLVRVGG 683
Query: 418 TIVYDNTLWCGTVAMP 371
+IVYDNTLW GTVA+P
Sbjct: 684 SIVYDNTLWAGTVALP 731
>gb|BG557655.1|BG557655 EM1_54_G11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 528
Score = 150 bits (322), Expect = 2e-035
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = -2 / +1
Query: 433 VRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADG 254
VRVGG+IVYDNTLW GTVA+PPETPM+D+DRRFSAAI+DLNVRLS DERVEVCQLAIADG
Sbjct: 1 VRVGGSIVYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKDERVEVCQLAIADG 180
Query: 253 VTICRRLV* 227
+TICRRLV*
Sbjct: 181 ITICRRLV* 207
Score = 116 bits (249), Expect = 2e-025
Identities = 54/69 (78%), Positives = 58/69 (84%)
Frame = +3 / -2
Query: 222 LHQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSV 401
+HQTRRRQMV PSAMAS QTSTRSS + TLRSL+AAENL S S MGVSGG ATVP SV
Sbjct: 212 VHQTRRRQMVMPSAMASWQTSTRSSLDSLTLRSLIAAENLRSRSFMGVSGGNATVPAHSV 33
Query: 402 LSYTMVPPT 428
LSYTM+PPT
Sbjct: 32 LSYTMLPPT 6
Score = 106 bits (227), Expect = 4e-022
Identities = 44/69 (63%), Positives = 52/69 (75%)
Frame = +2 / -1
Query: 227 SDEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVV 406
SDEAAA+GDAVGDGEL DL+AL+ + ++EV D REPPV V HGRLR HGP P+RVV
Sbjct: 207 SDEAAADGDAVGDGELADLDALILRQPDIEVLDRRREPPVQVIHGRLRRQRHGPGPQRVV 28
Query: 407 VHDGAADAH 433
+HD A H
Sbjct: 27 IHDAPAHPH 1
>gb|BE360918.1|BE360918 DG1_67_F09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 586
Score = 149 bits (320), Expect = 3e-035
Identities = 63/120 (52%), Positives = 80/120 (66%)
Frame = -2 / +1
Query: 571 DFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLW 392
D A NL ADE N G+FDF FVDADK NY NYH++LL+LV++GG I YDNTLW
Sbjct: 34 DLETMAACRNLMTTSADEKNHGSFDFVFVDADKDNYLNYHDRLLKLVKLGGLIGYDNTLW 213
Query: 391 CGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WSQCV 212
G+V +P + PM R + + LN L+ADERVE+CQL + DGVT+CRR+ * C+
Sbjct: 214 NGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADERVEICQLPVGDGVTLCRRVK*KKTCL 393
>gb|BE361254.1|BE361254 DG1_70_D12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 408
Score = 148 bits (317), Expect = 9e-035
Identities = 61/73 (83%), Positives = 65/73 (89%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
++AGVA KVDFREGPAL +LD LLADEAN GAFDFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 188 DKAGVAHKVDFREGPALEHLDALLADEANHGAFDFAFVDADKPNYVRYHEQLLRLVRVGG 367
Query: 418 TIVYDNTLWCGTV 380
+VYDNTLW GTV
Sbjct: 368 AVVYDNTLWDGTV 406
>gb|CD229128.1|CD229128 CCC1_13_F11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_13_F11_A007 3', mRNA sequence
Length = 542
Score = 147 bits (315), Expect = 2e-034
Identities = 59/105 (56%), Positives = 76/105 (72%)
Frame = -2 / +2
Query: 526 ADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDI 347
ADE N G+FDF FVDADK NY NYH++LL+LV++GG I YDNTLW G+V +P + PM
Sbjct: 2 ADEKNHGSFDFVFVDADKDNYLNYHDRLLKLVKLGGLIGYDNTLWNGSVVLPDDAPMRKY 181
Query: 346 DRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WSQCV 212
R + + LN L+ADERVE+CQL + DGVT+CRR+ * C+
Sbjct: 182 IRFYRDFVLVLNKALAADERVEICQLPVGDGVTLCRRVK*KKTCL 316
>gb|CD462503.1|CD462503 ETH1_38_E02.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_38_E02_A002 3', mRNA sequence
Length = 552
Score = 141 bits (303), Expect = 8e-033
Identities = 59/69 (85%), Positives = 65/69 (94%)
Frame = -2 / +2
Query: 433 VRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADG 254
VRVGG+IVYDNTLW GTVA+PPETPM+D+DRRFSAAI+DLNVRLS DERVEV QLAIAD
Sbjct: 2 VRVGGSIVYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKDERVEVFQLAIADR 181
Query: 253 VTICRRLV* 227
+TICRRLV*
Sbjct: 182 ITICRRLV* 208
Score = 112 bits (239), Expect = 5e-024
Identities = 53/71 (74%), Positives = 58/71 (81%)
Frame = +3 / -1
Query: 222 LHQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSV 401
+HQTRRRQMV SAMAS +TSTRSS + TLRSL+AAENL S S MGVSGG ATVP SV
Sbjct: 213 VHQTRRRQMVMRSAMASWKTSTRSSLDSLTLRSLIAAENLRSRSFMGVSGGNATVPAHSV 34
Query: 402 LSYTMVPPTRT 434
LSYTM+PPT T
Sbjct: 33 LSYTMLPPTLT 1
Score = 104 bits (221), Expect = 3e-021
Identities = 43/69 (62%), Positives = 52/69 (75%)
Frame = +2 / -3
Query: 227 SDEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVV 406
S+EAAA+GDAVGDGEL DL+AL+ + ++EV D REPPV V HGRLR HGP P+RVV
Sbjct: 208 SNEAAADGDAVGDGELEDLDALILRQPDIEVLDRRREPPVQVIHGRLRRQRHGPGPQRVV 29
Query: 407 VHDGAADAH 433
+HD A H
Sbjct: 28 IHDAPAHPH 2
>gb|CN138077.1|CN138077 OX1_61_C04.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_61_C04_A002 5', mRNA sequence
Length = 809
Score = 139 bits (298), Expect = 4e-032
Identities = 54/81 (66%), Positives = 67/81 (82%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD+L+ADE N G+FDF FVDADK NY NYH++LL+LV++GG
Sbjct: 530 EKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLLKLVKLGG 709
Query: 418 TIVYDNTLWCGTVAMPPETPM 356
I YDNTLW G+V +P + PM
Sbjct: 710 LIGYDNTLWNGSVVLPDDAPM 772
>gb|CX609214.1|CX609214 ANR1_11_G12.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_G12_A002 3', mRNA sequence
Length = 617
Score = 138 bits (295), Expect = 1e-031
Identities = 56/92 (60%), Positives = 71/92 (77%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
++AGVA K+DFR G AL LD+++A+E N G FDFAFVDADK N+ NYHE+LL+LVRVGG
Sbjct: 151 DKAGVAHKIDFRVGLALPVLDQMVAEEGNKGRFDFAFVDADKVNFLNYHERLLQLVRVGG 330
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAI 323
I YDNTLW G+V P+ P++ R F+AAI
Sbjct: 331 LIAYDNTLWGGSVVASPDEPLAAATREFNAAI 426
>gb|CN137417.1|CN137417 OX1_57_D04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_57_D04_A002 3', mRNA sequence
Length = 531
Score = 137 bits (293), Expect = 2e-031
Identities = 55/65 (84%), Positives = 62/65 (95%)
Frame = -2 / +2
Query: 421 GTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTIC 242
G+IVYDNTLW GTVA+PPETPM+D+DRRFSAAI+DLNVRL DERVEVCQLAIA+G+TIC
Sbjct: 2 GSIVYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLFKDERVEVCQLAIAEGITIC 181
Query: 241 RRLV* 227
RRLV*
Sbjct: 182 RRLV* 196
Score = 111 bits (238), Expect = 7e-024
Identities = 53/67 (79%), Positives = 55/67 (82%)
Frame = +3 / -1
Query: 222 LHQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSV 401
LHQTRRRQMV PSAMAS QTSTRSS TLRSL+AAENL S S MGVSGG ATVP SV
Sbjct: 201 LHQTRRRQMVMPSAMASWQTSTRSSLNSLTLRSLIAAENLRSRSFMGVSGGNATVPAHSV 22
Query: 402 LSYTMVP 422
LSYTM+P
Sbjct: 21 LSYTMLP 1
>gb|CW180236.1|CW180236 104_594_11160530_116_36635_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11160530, DNA
sequence
Length = 688
Score = 136 bits (292), Expect = 2e-031
Identities = 58/67 (86%), Positives = 59/67 (88%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E AGVA KVDFREGPAL LD LLADEAN GAFDFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 486 ESAGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADKPNYVRYHEQLLRLVRVGG 665
Query: 418 TIVYDNT 398
+IVYDNT
Sbjct: 666 SIVYDNT 686
>gb|CN127238.1|CN127238 RHOH1_21_G07.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_G07_A002 5', mRNA sequence
Length = 859
Score = 136 bits (291), Expect = 3e-031
Identities = 56/97 (57%), Positives = 71/97 (73%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD+L+ADE + G+FDF FVDAD NY NYH++LL+LV++GG
Sbjct: 524 EKAGVAHKIDFREGPALPVLDDLIADEKDHGSFDFVFVDADXDNYLNYHDRLLKLVKLGG 703
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNV 308
I YDNTLW G+V +P + PM R + I L V
Sbjct: 704 LIGYDNTLWNGSVVLPDDAPMRKYIRFYRVEICQLPV 814
>gb|CW463139.1|CW463139 fsbb001f211j12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f211j12, DNA
sequence
Length = 739
Score = 133 bits (285), Expect = 2e-030
Identities = 56/81 (69%), Positives = 65/81 (80%)
Frame = -2 / +3
Query: 595 RAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGT 416
RAGVA KVDFREG A +LD LLA E+NLGAFDFAFVDADK +Y YHE+LLRLV VGG
Sbjct: 495 RAGVAHKVDFREGLASEHLDALLAAESNLGAFDFAFVDADKESYGGYHERLLRLVLVGGV 674
Query: 415 IVYDNTLWCGTVAMPPETPMS 353
+ YDNTLW G+VA P + P++
Sbjct: 675 LAYDNTLWGGSVAFPDDAPLT 737
>gb|BG559614.1|BG559614 RHIZ2_71_B07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 294
Score = 131 bits (280), Expect = 1e-029
Identities = 52/59 (88%), Positives = 57/59 (96%)
Frame = -2 / +2
Query: 406 DNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV 230
DNTLW GTVA+PPETPM+D+DRRFSAAI+DLNVRLS DERVEVCQLAIADG+TICRRLV
Sbjct: 20 DNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKDERVEVCQLAIADGITICRRLV 196
>gb|CD430220.1|CD430220 ETH1_17_C09.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_17_C09_A002 5', mRNA sequence
Length = 744
Score = 112 bits (240), Expect(2) = 2e-029
Identities = 49/59 (83%), Positives = 49/59 (83%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVG 422
E AGVA KVDFREGPAL LD LLADEAN GAFDFAFVDAD PNY YHEQLLRLVR G
Sbjct: 513 ESAGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADXPNYVRYHEQLLRLVRGG 689
Score = 37.3 bits (75), Expect(2) = 2e-029
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -2 / +1
Query: 427 VGGTIVYDNTLWCGT 383
VGG+IVYDNTLW GT
Sbjct: 685 VGGSIVYDNTLWAGT 729
>gb|BE363151.1|BE363151 DG1_9_E08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 440
Score = 130 bits (278), Expect = 2e-029
Identities = 55/105 (52%), Positives = 69/105 (65%)
Frame = -2 / +2
Query: 571 DFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLW 392
D A NL ADE N G+FDF FVDADK NY NYH++LL+LV++GG I YDNTLW
Sbjct: 125 DLETMAACRNLMTTSADEKNHGSFDFVFVDADKDNYLNYHDRLLKLVKLGGLIGYDNTLW 304
Query: 391 CGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIAD 257
G+V +P + PM R + + LN L+ADERVE+CQL + D
Sbjct: 305 NGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADERVEICQLPVGD 439
>gb|AW923175.1|AW923175 DG1_49_A09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 404
Score = 126 bits (269), Expect = 4e-028
Identities = 51/59 (86%), Positives = 56/59 (94%)
Frame = -2 / +1
Query: 403 NTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV* 227
NTLW GTVA+PPETPM+D+DRRFSAAI+DLNVRL DERVEVCQLAIADG+TICRRLV*
Sbjct: 1 NTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLFKDERVEVCQLAIADGITICRRLV* 177
>gb|CX609300.1|CX609300 ANR1_11_G12.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_G12_A002 5', mRNA sequence
Length = 659
Score = 125 bits (267), Expect = 7e-028
Identities = 50/82 (60%), Positives = 64/82 (78%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
++AGVA K+DFR AL LD+++A+E N G FDFAFVDADK N+ NYHE+LL+LVRVGG
Sbjct: 409 DKAGVAHKIDFRVRLALPVLDQMVAEEGNKGRFDFAFVDADKVNFLNYHERLLQLVRVGG 588
Query: 418 TIVYDNTLWCGTVAMPPETPMS 353
I YDNTLW G+V P+ P++
Sbjct: 589 LIAYDNTLWGGSVVASPDEPLA 654
>gb|CN132666.1|CN132666 OX1_7_B07.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_7_B07_A002 5', mRNA sequence
Length = 773
Score = 123 bits (264), Expect = 2e-027
Identities = 49/92 (53%), Positives = 66/92 (71%)
Frame = -2 / +2
Query: 487 VDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNV 308
+DADK NY NYH++LL+LV++GG I YDNTLW G+V +P + PM R + + LN
Sbjct: 491 MDADKDNYLNYHDRLLKLVKLGGLIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLVLNK 670
Query: 307 RLSADERVEVCQLAIADGVTICRRLV*WSQCV 212
L+ADERVE+CQL + DGVT+CRR+ * C+
Sbjct: 671 ALAADERVEICQLPVGDGVTLCRRVK*KKTCL 766
>gb|AW282821.1|AW282821 LG1_305_H12.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 464
Score = 118 bits (253), Expect = 6e-026
Identities = 47/89 (52%), Positives = 63/89 (70%)
Frame = -2 / +3
Query: 478 DKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLS 299
DK NY NYH++LL+LV++GG I YDNTLW G+V +P + PM R + + LN L+
Sbjct: 3 DKDNYLNYHDRLLKLVKLGGLIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLVLNKALA 182
Query: 298 ADERVEVCQLAIADGVTICRRLV*WSQCV 212
ADERVE+CQL + DGVT+CRR+ * C+
Sbjct: 183 ADERVEICQLPVGDGVTLCRRVK*KKTCL 269
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 588,001,871
Number of Sequences: 832831
Number of extensions: 7509965
Number of successful extensions: 123473
Number of sequences better than 1.0e-020: 68
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 17468390898
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)