TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2943885.2.1
(581 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD224613.1|CD224613 CCC1_35_F08.b1_A007 Callus culture/c... 316 1e-085
gb|CW150106.1|CW150106 104_549_11142853_116_36303_057 Sorgh... 205 1e-082
gb|CN148075.1|CN148075 WOUND1_54_C02.b1_A002 Wounded leaves... 210 5e-076
gb|CW432748.1|CW432748 fsbb001f147k02f0 Sorghum methylation... 108 1e-072
gb|CW150107.1|CW150107 104_549_11142853_148_36304_057 Sorgh... 205 2e-066
gb|CD424348.1|CD424348 SA1_5_E09.b1_A002 Salicylic acid-tre... 170 6e-064
gb|AW677595.1|AW677595 DG1_8_E07.g1_A002 Dark Grown 1 (DG1)... 135 4e-063
gb|CW404739.1|CW404739 fsbb001f097a06k0 Sorghum methylation... 166 7e-058
gb|CN144834.1|CN144834 WOUND1_25_E11.b2_A002 Wounded leaves... 166 7e-058
gb|CB928358.1|CB928358 ABA1_15_H11.b1_A012 Abscisic acid-tr... 166 9e-058
gb|CD227847.1|CD227847 CCC1_56_A04.b1_A007 Callus culture/c... 156 9e-055
gb|BZ340250.1|BZ340250 ic37f08.b1 WGS-SbicolorF (JM107 adap... 137 1e-054
gb|CW412590.1|CW412590 fsbb001f108e18k0 Sorghum methylation... 138 1e-049
gb|CD223127.1|CD223127 CCC1_26_D11.b1_A007 Callus culture/c... 138 1e-049
gb|BE599295.1|BE599295 PI1_87_G04.g1_A002 Pathogen induced ... 137 2e-047
gb|CD212039.1|CD212039 HS1_68_G01.b1_A012 Heat-shocked seed... 132 2e-047
gb|CW496055.1|CW496055 fsbb001f288b11k0 Sorghum methylation... 133 5e-047
gb|BG052249.1|BG052249 RHIZ2_12_A12.g1_A003 Rhizome2 (RHIZ2... 188 6e-047
gb|CB926451.1|CB926451 ABA1_9_A08.b1_A012 Abscisic acid-tre... 130 8e-047
gb|CW785094.1|CW785094 SP__Ba0007P10.f SP__Ba Sorghum propi... 133 4e-046
gb|CW395484.1|CW395484 fsbb001f083i14k0 Sorghum methylation... 160 7e-046
gb|CW500380.1|CW500380 fsbb001f295k23k0 Sorghum methylation... 110 7e-045
gb|CW472599.1|CW472599 fsbb001f227j19k0 Sorghum methylation... 166 6e-044
gb|CW313572.1|CW313572 104_803_11471355_116_35786_002 Sorgh... 133 8e-043
gb|CW239896.1|CW239896 104_698_11217909_116_37504_089 Sorgh... 131 4e-042
gb|BI643608.1|BI643608 DG1_91_A08.b1_A002 Dark Grown 1 (DG1... 127 5e-042
gb|CB928778.1|CB928778 ABA1_24_C06.b1_A012 Abscisic acid-tr... 93 8e-040
gb|CW208733.1|CW208733 104_638_11188843_148_36982_074 Sorgh... 133 2e-039
gb|CW239897.1|CW239897 104_698_11217909_148_37505_089 Sorgh... 133 1e-037
gb|CL187366.1|CL187366 104_402_10900827_116_32436_002 Sorgh... 107 2e-035
gb|CW232538.1|CW232538 104_685_11212872_148_37363_092 Sorgh... 125 6e-035
gb|CW404738.1|CW404738 fsbb001f097a06f0 Sorghum methylation... 148 8e-035
gb|CL189680.1|CL189680 104_407_10905541_116_32481_061 Sorgh... 110 9e-035
gb|CW408694.1|CW408694 fsbb001f102l04f0 Sorghum methylation... 106 2e-034
gb|CW312128.1|CW312128 104_801_11470592_148_36283_018 Sorgh... 121 3e-034
gb|CW269433.1|CW269433 104_740_11401840_148_35315_054 Sorgh... 121 3e-034
gb|CW072473.1|CW072473 104_325_10592285_116_30541 Sorghum m... 120 6e-034
gb|AW923519.1|AW923519 DG1_52_C12.g1_A002 Dark Grown 1 (DG1... 145 6e-034
gb|BE364586.2|BE364586 PI1_15_G08.g1_A002 Pathogen induced ... 145 6e-034
gb|CW449893.1|CW449893 fsbb001f188e03k0 Sorghum methylation... 117 1e-033
gb|CW412589.1|CW412589 fsbb001f108e18f0 Sorghum methylation... 97 3e-033
gb|CW313573.1|CW313573 104_803_11471355_148_35790_002 Sorgh... 118 3e-033
gb|CW273802.1|CW273802 104_746_11404095_116_35362_056 Sorgh... 106 2e-032
gb|CW312127.1|CW312127 104_801_11470592_116_36284_018 Sorgh... 121 3e-032
gb|BE126076.1|BE126076 DG1_65_E03.g1_A002 Dark Grown 1 (DG1... 115 1e-030
gb|BE362888.2|BE362888 DG1_90_B11.g1_A002 Dark Grown 1 (DG1... 115 1e-030
gb|CX616980.1|CX616980 GABR1_31_B05.b1_A002 GA- or brassino... 115 1e-030
gb|CN130398.1|CN130398 RHOH1_41_F02.b1_A002 Acid- and alkal... 132 6e-030
gb|CN141229.1|CN141229 OX1_50_D06.b1_A002 Oxidatively-stres... 132 6e-030
gb|BG241163.1|BG241163 OV1_39_A04.b1_A002 Ovary 1 (OV1) Sor... 131 8e-030
gb|CW467955.1|CW467955 fsbb001f219n18f0 Sorghum methylation... 99 7e-028
gb|CW494886.1|CW494886 fsbb001f286g11f0 Sorghum methylation... 94 1e-027
gb|CW397587.1|CW397587 fsbb001f086k03f0 Sorghum methylation... 94 1e-027
gb|CW365974.1|CW365974 fsbb001f038m02k0 Sorghum methylation... 111 1e-027
gb|CW200287.1|CW200287 104_625_11183983_148_36862_020 Sorgh... 91 2e-027
gb|CW071601.1|CW071601 104_323_10591591_114_30471 Sorghum m... 111 2e-027
gb|CW232537.1|CW232537 104_685_11212872_116_37364_092 Sorgh... 77 3e-027
gb|CL190026.1|CL190026 104_407_10905785_116_32481_067 Sorgh... 107 4e-027
gb|CW312636.1|CW312636 104_802_11470866_116_35781_069 Sorgh... 94 6e-027
gb|CW363376.1|CW363376 fsbb001f034p04k0 Sorghum methylation... 91 8e-027
gb|CW107875.1|CW107875 104_478_11096833_116_34485_009 Sorgh... 121 8e-027
gb|CW234266.1|CW234266 104_687_11213889_116_37381_033 Sorgh... 73 1e-026
gb|CW311011.1|CW311011 104_800_11470011_116_35753_010 Sorgh... 108 5e-026
gb|CW408966.1|CW408966 fsbb001f103b09f0 Sorghum methylation... 90 3e-025
gb|CF428156.1|CF428156 PH1_13_G05.b1_A002 Phosphorous-defic... 90 6e-025
gb|CN145338.1|CN145338 WOUND1_28_G04.b2_A002 Wounded leaves... 97 1e-024
gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence 104 1e-024
gb|CL175428.1|CL175428 104_381_10892447_116_31765_047 Sorgh... 95 3e-024
gb|CW334674.1|CW334674 104_833_11482623_148_36071_060 Sorgh... 95 3e-024
gb|AF199453.1|AF199453 Sorghum bicolor UDP-glucose glucosyl... 88 7e-024
emb|AX163853.1| Sequence 2 from Patent WO0140491 88 7e-024
gb|CW370930.1|CW370930 fsbb001f046c06k0 Sorghum methylation... 101 7e-024
gb|CW323782.1|CW323782 104_818_11476813_116_35902_061 Sorgh... 88 7e-024
gb|BE362158.1|BE362158 DG1_84_E06.g1_A002 Dark Grown 1 (DG1... 88 7e-024
gb|CW289492.1|CW289492 104_768_11412507_116_35547_010 Sorgh... 100 1e-023
gb|CW241136.1|CW241136 104_700_11218601_116_37545_077 Sorgh... 99 1e-023
gb|CW217040.1|CW217040 104_650_11195443_148_37130_078 Sorgh... 88 2e-023
gb|CW159792.1|CW159792 104_566_11149541_116_36421_029 Sorgh... 109 4e-023
gb|CW087763.1|CW087763 104_432_10947820_114_32553_008 Sorgh... 100 5e-023
gb|CW087764.1|CW087764 104_432_10947820_116_32557_008 Sorgh... 100 5e-023
gb|CN138029.1|CN138029 OX1_61_F11.b1_A002 Oxidatively-stres... 102 5e-023
gb|CW064664.1|CW064664 104_311_10522696_115_30121 Sorghum m... 97 5e-023
gb|CW115454.1|CW115454 104_490_11106569_116_34592_069 Sorgh... 91 5e-023
gb|CW239882.1|CW239882 104_698_11217900_116_37520_042 Sorgh... 108 6e-023
gb|BF586785.1|BF586785 FM1_30_C10.g1_A003 Floral-Induced Me... 88 6e-023
gb|CW785134.1|CW785134 SP__Ba0008J08.f SP__Ba Sorghum propi... 93 6e-023
gb|CW391999.1|CW391999 fsbb001f078g16k0 Sorghum methylation... 93 6e-023
gb|BE597326.1|BE597326 PI1_72_B01.g1_A002 Pathogen induced ... 93 6e-023
gb|CL164885.1|CL164885 104_359_10808216_116_31817_200 Sorgh... 93 6e-023
gb|BZ691445.1|BZ691445 SP__Ba0008J08.f SP__Ba Sorghum propi... 93 6e-023
gb|BE358736.1|BE358736 DG1_31_B04.g1_A002 Dark Grown 1 (DG1... 108 8e-023
gb|CW283440.1|CW283440 104_759_11409248_148_35476_018 Sorgh... 107 1e-022
gb|CW222899.1|CW222899 104_658_11202620_116_37184_072 Sorgh... 95 1e-022
gb|CB927938.1|CB927938 ABA1_35_B08.b1_A012 Abscisic acid-tr... 95 1e-022
gb|CW427183.1|CW427183 fsbb001f139a21f0 Sorghum methylation... 97 1e-022
gb|CW424419.1|CW424419 fsbb001f134l24f0 Sorghum methylation... 100 1e-022
gb|CW253228.1|CW253228 104_716_11224968_148_35099_084 Sorgh... 97 1e-022
gb|CD203746.1|CD203746 HS1_1_B01.g1_A012 Heat-shocked seedl... 86 2e-022
gb|BE359082.1|BE359082 DG1_38_F04.g1_A002 Dark Grown 1 (DG1... 91 2e-022
gb|BE359974.1|BE359974 DG1_60_C01.g2_A002 Dark Grown 1 (DG1... 91 3e-022
gb|CW289493.1|CW289493 104_768_11412507_148_35551_010 Sorgh... 95 4e-022
gb|CD236389.1|CD236389 SS1_34_G08.b1_A012 Salt-stressed see... 95 4e-022
gb|CW392765.1|CW392765 fsbb001f079i12k0 Sorghum methylation... 100 4e-022
gb|BE358427.1|BE358427 DG1_29_F10.g1_A002 Dark Grown 1 (DG1... 100 4e-022
gb|BE356265.1|BE356265 DG1_123_A04.g1_A002 Dark Grown 1 (DG... 77 5e-022
gb|CN143621.1|CN143621 WOUND1_17_H10.b1_A002 Wounded leaves... 95 6e-022
gb|CW334673.1|CW334673 104_833_11482623_116_36070_060 Sorgh... 95 6e-022
gb|CW056988.1|CW056988 104_298_10517976_115_30157 Sorghum m... 101 6e-022
gb|BE364954.1|BE364954 PI1_22_F04.b1_A002 Pathogen induced ... 95 6e-022
gb|CW494887.1|CW494887 fsbb001f286g11k0 Sorghum methylation... 89 8e-022
gb|CW041558.1|CW041558 104_275_10506614_115_30285 Sorghum m... 96 8e-022
gb|BE358121.1|BE358121 DG1_24_C10.g1_A002 Dark Grown 1 (DG1... 94 8e-022
gb|BE600358.1|BE600358 PI1_95_D08.g1_A002 Pathogen induced ... 94 8e-022
gb|CX619210.1|CX619210 GABR1_44_D05.b1_A002 GA- or brassino... 94 8e-022
gb|CW167654.1|CW167654 104_577_11153717_116_36491_031 Sorgh... 104 1e-021
gb|CW466433.1|CW466433 fsbb001f217k17k0 Sorghum methylation... 104 1e-021
gb|CN139110.1|CN139110 OX1_16_B11.b1_A002 Oxidatively-stres... 104 1e-021
gb|CX609006.1|CX609006 ANR1_10_C05.b1_A002 Anaerobic roots ... 104 1e-021
gb|CW090795.1|CW090795 104_436_10949477_114_32604_017 Sorgh... 90 1e-021
gb|CW405793.1|CW405793 fsbb001f098i04k0 Sorghum methylation... 77 2e-021
gb|CB926347.1|CB926347 ABA1_8_G03.b1_A012 Abscisic acid-tre... 102 2e-021
gb|CW277776.1|CW277776 104_752_11406206_148_35418_063 Sorgh... 85 3e-021
gb|CD426207.1|CD426207 SA1_19_E09.b1_A002 Salicylic acid-tr... 102 4e-021
gb|CW418587.1|CW418587 fsbb001f123b10k0 Sorghum methylation... 84 5e-021
gb|CW501587.1|CW501587 fsbb001f297h15k0 Sorghum methylation... 92 5e-021
gb|CB928346.1|CB928346 ABA1_15_C06.b1_A012 Abscisic acid-tr... 93 5e-021
gb|CN130059.1|CN130059 RHOH1_39_B11.b1_A002 Acid- and alkal... 88 7e-021
gb|CW223632.1|CW223632 104_659_11203019_148_37186_038 Sorgh... 67 7e-021
gb|CW381313.1|CW381313 fsbb001f062k12k0 Sorghum methylation... 87 7e-021
gb|CW264348.1|CW264348 104_733_11231241_148_35249_045 Sorgh... 89 7e-021
gb|CW351772.1|CW351772 fsbb001f013k19k0 Sorghum methylation... 87 7e-021
gb|CD225266.1|CD225266 CCC1_39_E05.b1_A007 Callus culture/c... 88 7e-021
gb|BE361351.1|BE361351 DG1_71_C04.g1_A002 Dark Grown 1 (DG1... 88 7e-021
gb|CW477959.1|CW477959 fsbb001f235j04f0 Sorghum methylation... 95 9e-021
>gb|CD224613.1|CD224613 CCC1_35_F08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_35_F08_A007 3', mRNA sequence
Length = 609
Score = 316 bits (685), Expect = 1e-085
Identities = 128/146 (87%), Positives = 138/146 (94%)
Frame = +2 / +3
Query: 59 VLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVP 238
VLRS+EAEKLSRQLGG+CKE+GL+VPFCPQLEVLAHKATGCFLTHCGWNSTIES+A+GVP
Sbjct: 3 VLRSDEAEKLSRQLGGKCKEKGLVVPFCPQLEVLAHKATGCFLTHCGWNSTIESMATGVP 182
Query: 239 MVAMPQWADQPTTAKYVESAWGIGVRMRKGSLVRKEVERCIREVMGGERKHVYGRNAARW 418
M AMPQWADQPTTAKYVESAWGIGVRMRKG + R+EVERCIREVM GERK + +NAARW
Sbjct: 183 MAAMPQWADQPTTAKYVESAWGIGVRMRKGLVRREEVERCIREVMEGERKDEFRQNAARW 362
Query: 419 MHKAKEAMQEGGSSDKNIAEFAAKYL 496
M KAKEAMQEGGSSDKNIAEFAAKYL
Sbjct: 363 MKKAKEAMQEGGSSDKNIAEFAAKYL 440
Score = 282 bits (610), Expect = 3e-075
Identities = 122/146 (83%), Positives = 127/146 (86%)
Frame = -3 / -3
Query: 495 KYLAANSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFLTKEPFRM 316
KY AANSAMFLSELPPSC+ASLA I AAF + FLSP ITS MHLSTS L +PFR+
Sbjct: 439 KYFAANSAMFLSELPPSCIASLAFFIHLAAFCLNSSFLSPSITSRMHLSTSSLLTKPFRI 260
Query: 315 RTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*GQK 136
RTPIPHALSTYLAVVGWSAH GIA IGTP+AMDSIVEFHPQCVRKQPVALCASTSS*GQK
Sbjct: 259 RTPIPHALSTYLAVVGWSAHCGIAAIGTPVAMDSIVEFHPQCVRKQPVALCASTSS*GQK 80
Query: 135 GTMRPLSLHLPPSCRDSFSASLDLST 58
GT RP SLHLPPSCRDSFSAS DLST
Sbjct: 79 GTTRPFSLHLPPSCRDSFSASSDLST 2
Score = 174 bits (375), Expect(2) = 5e-052
Identities = 69/89 (77%), Positives = 72/89 (80%)
Frame = -2 / -2
Query: 325 LPHAHPNPPRALHIFGRRRLVRPLGHRHHWNTTSDGFNRRVPPAVRQEATCGLVCQHLEL 146
LPH HPNPP ALHI GRRRLVRPL HR HWNT+ G +RRVPP VRQEATCGLVCQHL+L
Sbjct: 269 LPHPHPNPPCALHILGRRRLVRPLRHRRHWNTSGHGLDRRVPPTVRQEATCGLVCQHLKL 90
Query: 145 RTEGDNEAPFLAPATELSRQFFCLVGPQH 59
RTEG NEA LA A EL RQ CLVGPQH
Sbjct: 89 RTEGHNEALLLALAAELPRQLLCLVGPQH 3
Score = 147 bits (316), Expect(2) = 1e-042
Identities = 60/78 (76%), Positives = 66/78 (84%)
Frame = +3 / +1
Query: 57 GC*GPTRQKNCLDSSVAGARKGASLSPSVLSSRCWHTRPQVAS*RTAGGTRRLNPSLVVF 236
GC*GPTRQ++CL SS A AR+ ASL PSVLS RCWHTRPQVAS*RT GGTRR +P +VF
Sbjct: 1 GC*GPTRQRSCLGSSAASARRRASLCPSVLSLRCWHTRPQVAS*RTVGGTRRSSPWPLVF 180
Query: 237 QWWRCPSGRTSRRRPNMW 290
QW RC SGRTSRRRP+MW
Sbjct: 181 QWRRCRSGRTSRRRPSMW 234
Score = 138 bits (295), Expect(2) = 2e-038
Identities = 58/88 (65%), Positives = 64/88 (72%)
Frame = +1 / +2
Query: 58 GAEVQRGRKTVSTARWQVQGKGPHCPLLSSARGAGTQGHRLLPDALRVELDD*IHR*WCS 237
GAEV+RGR+ VS AR QVQG+GP C LLSSA GAGTQGHRLLPDAL VELDD +H WCS
Sbjct: 2 GAEVRRGREAVSAARRQVQGEGPRCALLSSA*GAGTQGHRLLPDALWVELDDRVHGHWCS 181
Query: 238 NXXXXXXXXXXXXXQICGERVGDWGAHA 321
N Q+CGER+GDWGA A
Sbjct: 182 NGGDAAVGGPADDGQVCGERMGDWGADA 265
Score = 116 bits (249), Expect(2) = 1e-033
Identities = 49/88 (55%), Positives = 51/88 (57%)
Frame = -1 / -1
Query: 320 ACAPQSPTRSPHIWXXXXXXXXXXXXPLEHH*RWIQXXXXXXXXXXSNLWPCVPAPRAED 141
A APQSP RSPH W PLEH W + SNLWPCVPAP+AED
Sbjct: 264 ASAPQSPMRSPHTWPSSAGPPTAASPPLEHQWPWTRSSSSTHSASGSNLWPCVPAPQAED 85
Query: 140 RRGQ*GPFPCTCHRAVETVFLPRWTSAP 57
RR Q GP PCTC RA ET LPR TSAP
Sbjct: 84 RRAQRGPSPCTCRRAAETASLPRRTSAP 1
Score = 51.0 bits (105), Expect(2) = 5e-052
Identities = 22/37 (59%), Positives = 25/37 (67%)
Frame = -1 / -1
Query: 500 LVNTWLRILQCSCQSFLLPAWPPWPCASNERHSSRTH 390
L NT L+I QCSCQS LLPA PWP +S S+ TH
Sbjct: 444 LTNTLLQIQQCSCQSSLLPASLPWPSSSISPRSA*TH 334
Score = 47.3 bits (97), Expect(2) = 1e-033
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -2 / -2
Query: 493 ILGCEFCNVLVRASSFLHGLLGLVHPT 413
IL C+F NVLVRA SFLH LGL+HP+
Sbjct: 437 ILCCKFSNVLVRAPSFLHRFLGLLHPS 357
Score = 46.9 bits (96), Expect(2) = 1e-042
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +1 / +2
Query: 385 EACVREECRSLDAQGQGGHAGRRKL*QEHCRIRSQVFTKV 504
E V+ E +D +GQG AGRR+L*QEHC I S+VF +
Sbjct: 329 EG*VQAERGEMDEEGQGSDAGRREL*QEHC*ICSKVFVSL 448
Score = 41.8 bits (85), Expect(2) = 2e-038
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +3 / +1
Query: 390 MCTGGMPLVGCTRPRRPCRKEEALTRTLQNSQPSIYQ 500
M +G G RPR+ CRKE ALTRTL N Q SI Q
Sbjct: 334 MSSGRTRRDG*RRPRKRCRKEGALTRTLLNLQQSICQ 444
>gb|CW150106.1|CW150106 104_549_11142853_116_36303_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11142853, DNA
sequence
Length = 658
Score = 205 bits (442), Expect(2) = 1e-082
Identities = 76/107 (71%), Positives = 96/107 (89%)
Frame = +2 / -3
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGC 181
++L ELG+GLCDSG+PF+WV+RS EA+KLS+ LG RC+E+GLIV +CPQL+VL+HKATGC
Sbjct: 524 DELYELGSGLCDSGRPFIWVVRSGEAQKLSQDLGERCREKGLIVSWCPQLDVLSHKATGC 345
Query: 182 FLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMR 322
F+THCGWNST E+I +GVPMV +P+ ADQPT AKYVESAW IG+RM+
Sbjct: 344 FITHCGWNSTTEAIVAGVPMVGLPRSADQPTAAKYVESAWRIGLRMQ 204
Score = 143 bits (306), Expect(2) = 1e-058
Identities = 62/92 (67%), Positives = 68/92 (73%)
Frame = -3 / +1
Query: 318 MRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*GQ 139
+R PI HALSTY A VGWSA G T+GTP + S+VEFHPQCV KQPVALC TSS*G
Sbjct: 208 IRRPILHALSTYFAAVGWSADRGKPTMGTPATIASVVEFHPQCVMKQPVALCDKTSS*GH 387
Query: 138 KGTMRPLSLHLPPSCRDSFSASLDLSTQTKGL 43
+ TMRP SLHL P DSF AS DL+TQ KGL
Sbjct: 388 QDTMRPFSLHLSPRSWDSFCASPDLTTQMKGL 483
Score = 122 bits (261), Expect(2) = 1e-082
Identities = 53/64 (82%), Positives = 57/64 (89%)
Frame = +2 / -3
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYLPK 502
KG + R+EVERCIREVM GERK + +NAARWM KAKEAMQEGGSSDKNIAEFAAKYLPK
Sbjct: 194 KGLVRREEVERCIREVMEGERKDEFRQNAARWMKKAKEAMQEGGSSDKNIAEFAAKYLPK 15
Query: 503 *ISD 514
*ISD
Sbjct: 14 *ISD 3
Score = 113 bits (242), Expect(2) = 7e-039
Identities = 53/106 (50%), Positives = 63/106 (59%)
Frame = -2 / +3
Query: 319 HAHPNPPRALHIFGRRRLVRPLGHRHHWNTTSDGFNRRVPPAVRQEATCGLVCQHLELRT 140
H +PPRALH+ RR LVR HH + D RRVPPAVR EA CGL+ Q + LR
Sbjct: 207 HPQTDPPRALHVLRRRWLVRRPRQAHHGHAGDDRLRRRVPPAVRDEAACGLMRQDI*LRA 386
Query: 139 EGDNEAPFLAPATELSRQFFCLVGPQHPNERLAGIAQSVAELVQLL 2
G +EA AP E+ Q L GP P+E AGIAQ AELV+L+
Sbjct: 387 PGHDEALLPAPLAEVLGQLLRLAGPHDPDEGPAGIAQPAAELVELV 524
Score = 104 bits (222), Expect(2) = 1e-058
Identities = 48/65 (73%), Positives = 51/65 (78%)
Frame = -3 / +1
Query: 516 *SEIYFGKYLAANSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFL 337
*SEIYFGKY AANSAMFLSELPPSC+ASLA I AAF + FLSP ITS MHLSTS L
Sbjct: 1 *SEIYFGKYFAANSAMFLSELPPSCIASLAFFIHLAAFCLNSSFLSPSITSRMHLSTSSL 180
Query: 336 TKEPF 322
+PF
Sbjct: 181 LTKPF 195
Score = 101 bits (216), Expect(2) = 2e-035
Identities = 48/96 (50%), Positives = 56/96 (58%)
Frame = +3 / -1
Query: 3 SSWTSSATDCAIPASLSFGC*GPTRQKNCLDSSVAGARKGASLSPSVLSSRCWHTRPQVA 182
+S TSSA CAIPA S G *GP R+++C +S GA + AS P LS RPQ A
Sbjct: 523 TSSTSSAAGCAIPAGPSSGS*GPARRRSCPKTSARGAGRRASSCPGALS*MSCRIRPQAA 344
Query: 183 S*RTAGGTRRLNPSLVVFQWWRCPSGRTSRRRPNMW 290
S RTAGGTRR S WW C RTS+RR + W
Sbjct: 343 SSRTAGGTRRRRRSSPACPWWACRGRRTSQRRRSTW 236
Score = 89.0 bits (188), Expect(2) = 7e-029
Identities = 42/67 (62%), Positives = 47/67 (70%)
Frame = +1 / -2
Query: 13 RARQRTVRFRQAFRLGAEVQRGRKTVSTARWQVQGKGPHCPLLSSARGAGTQGHRLLPDA 192
RARQR VRFRQA LG EV+RG + V R +VQG+GPH L+ SAR GHRLL A
Sbjct: 513 RARQRAVRFRQALHLGREVRRGAEAVPRPRREVQGEGPHRVLVPSARCLVA*GHRLLHHA 334
Query: 193 LRVELDD 213
LRVELDD
Sbjct: 333 LRVELDD 313
Score = 72.5 bits (152), Expect(2) = 5e-025
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = -1 / +2
Query: 179 NLWPCVPAPRAEDRRGQ*GPFPCTCHRAVETVFLPRWTSAPKRKACRNRTVRCRARPA 6
+LWP AE R +*GP PCT R + T PR TS P+ +ACRNRT RCRAR A
Sbjct: 347 SLWPYATRHLAEGTRTR*GPSPCTSRRGLGTASAPRRTSRPR*RACRNRTARCRARRA 520
Score = 68.0 bits (142), Expect(2) = 2e-035
Identities = 29/44 (65%), Positives = 34/44 (77%)
Frame = +1 / -2
Query: 385 EACVREECRSLDAQGQGGHAGRRKL*QEHCRIRSQVFTKVDFRL 516
E V+ EC +D +GQG AGRR+L*QEHC I S+VFTKVDFRL
Sbjct: 132 EG*VQAECGEMDEEGQGSDAGRREL*QEHC*ICSKVFTKVDFRL 1
Score = 68.0 bits (142), Expect(2) = 7e-039
Identities = 29/42 (69%), Positives = 32/42 (76%)
Frame = -1 / +2
Query: 515 NRKSTLVNTWLRILQCSCQSFLLPAWPPWPCASNERHSSRTH 390
NRKSTLVNT L+I QCSCQS LLPA PWP +S HS+ TH
Sbjct: 2 NRKSTLVNTLLQIQQCSCQSSLLPASLPWPSSSISPHSA*TH 127
Score = 64.3 bits (134), Expect(2) = 5e-025
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = -2 / +3
Query: 514 IGNLLW*ILGCEFCNVLVRASSFLHGLLGLVHPTSGI 404
IGNLLW*IL C+F NVLVRA SFLH LGL+HP+ I
Sbjct: 3 IGNLLW*ILCCKFSNVLVRAPSFLHRFLGLLHPSRRI 113
Score = 60.6 bits (126), Expect(2) = 7e-029
Identities = 28/42 (66%), Positives = 30/42 (71%)
Frame = +3 / -1
Query: 390 MCTGGMPLVGCTRPRRPCRKEEALTRTLQNSQPSIYQSRFPI 515
M +G M G RPR+ CRKE ALTRTL N Q SIYQSRFPI
Sbjct: 127 MSSGRMRRDG*RRPRKRCRKEGALTRTLLNLQQSIYQSRFPI 2
>gb|CN148075.1|CN148075 WOUND1_54_C02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_54_C02_A002 3', mRNA sequence
Length = 746
Score = 210 bits (453), Expect(2) = 5e-076
Identities = 78/107 (72%), Positives = 94/107 (87%)
Frame = +2 / +1
Query: 5 QLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCF 184
QL+ELGNGL +SGKPF+WV+RSNE KLS +L +CKERGLIV +C QLEVLAHKATGCF
Sbjct: 79 QLEELGNGLYNSGKPFIWVVRSNEEHKLSNELRAKCKERGLIVSWCSQLEVLAHKATGCF 258
Query: 185 LTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMRK 325
THCGWNST+E++ +GVPMVA+P WADQPT +KY+ES WG+GVR+RK
Sbjct: 259 FTHCGWNSTLEAVVNGVPMVAIPHWADQPTISKYMESIWGLGVRVRK 399
Score = 134 bits (288), Expect(2) = 6e-051
Identities = 59/93 (63%), Positives = 66/93 (70%)
Frame = -3 / -1
Query: 321 RMRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*G 142
R RTP PH LS Y +VGWSA GIATIGTPL S VEFHPQCV+KQPVALCA TSS
Sbjct: 395 RTRTPNPHMLSIYFDMVGWSAQCGIATIGTPLTTASSVEFHPQCVKKQPVALCARTSSWE 216
Query: 141 QKGTMRPLSLHLPPSCRDSFSASLDLSTQTKGL 43
+ T+RP SLHL S D+ +S DL+TQ GL
Sbjct: 215 HQETIRPRSLHLARSSLDNLCSSFDLTTQMNGL 117
Score = 102 bits (217), Expect(2) = 7e-030
Identities = 47/104 (45%), Positives = 62/104 (59%)
Frame = -2 / -3
Query: 325 LPHAHPNPPRALHIFGRRRLVRPLGHRHHWNTTSDGFNRRVPPAVRQEATCGLVCQHLEL 146
L H P ALHIF RLV P+ + HHW+T + F RRVP A+ +E TCG +C + EL
Sbjct: 399 LAHPDTQSPYALHIF*YGRLVCPMWYCHHWHTINYCFQRRVPSAMCEETTCGFMC*NFEL 220
Query: 145 RTEGDNEAPFLAPATELSRQFFCLVGPQHPNERLAGIAQSVAEL 14
+++A FLA T+ QF V P +PNE A I QS+A+L
Sbjct: 219 GAPRNDKATFLALGTKFIGQFVFFV*PHNPNEWFARIVQSIAQL 88
Score = 95.5 bits (202), Expect(2) = 5e-076
Identities = 40/63 (63%), Positives = 45/63 (71%)
Frame = +2 / +1
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYLPK 502
KG + R EVERCI++VM G+RK Y NA WM KAKEAMQ GGSSDKN+ EF AKY
Sbjct: 406 KGLVTRDEVERCIKDVMDGDRKDNYRMNAIMWMQKAKEAMQNGGSSDKNVCEFVAKYSSN 585
Query: 503 *IS 511
* S
Sbjct: 586 *FS 594
Score = 87.2 bits (184), Expect(2) = 6e-051
Identities = 39/60 (65%), Positives = 42/60 (70%)
Frame = -3 / -1
Query: 501 FGKYLAANSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFLTKEPF 322
F +Y A NS FLSELPP CMASLA CI AF+ FLSP ITSLMHLSTS L +PF
Sbjct: 584 FDEYFATNSQTFLSELPPFCMASLAFCIHIMAFIL*LSFLSPSITSLMHLSTSSLVTKPF 405
Score = 79.0 bits (166), Expect(2) = 9e-023
Identities = 41/92 (44%), Positives = 50/92 (54%)
Frame = +3 / +2
Query: 15 SSATDCAIPASLSFGC*GPTRQKNCLDSSVAGARKGASLSPSVLSSRCWHTRPQVAS*RT 194
S A DC I A+ SFG *G T+ NC + V AR A SS+ H +PQV S
Sbjct: 89 SWAMDCTILANHSFGL*GQTKNTNCPMNFVPSARNVALSFLGAPSSKF*HIKPQVVSSHI 268
Query: 195 AGGTRRLNPSLVVFQWWRCPSGRTSRRRPNMW 290
A GTRR L+V QWW+ G+TSR N+W
Sbjct: 269 ADGTRRWKQ*LMVCQWWQYHIGQTSRPYQNIW 364
Score = 49.2 bits (101), Expect(2) = 7e-030
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = -2 / -3
Query: 505 LLW*ILGCEFCNVLVRASSFLHGLLGLVHPTSGI 404
L+ *IL EF N+LVRA S LHG LGL+HP +G+
Sbjct: 588 LI**ILRHEFTNILVRAPSILHGFLGLLHPHNGV 487
Score = 48.7 bits (100), Expect(2) = 9e-023
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +3 / +2
Query: 399 GGMPLVGCTRPRRPCRKEEALTRTLQNSQPSIYQSRF 509
G PL GC RPR+PCR E A TR NS SI+Q F
Sbjct: 482 G*TPLCGCKRPRKPCRMEGARTRMFVNSWRSIHQISF 592
>gb|CW432748.1|CW432748 fsbb001f147k02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f147k02, DNA
sequence
Length = 738
Score = 108 bits (230), Expect(3) = 1e-072
Identities = 43/58 (74%), Positives = 50/58 (86%)
Frame = +2 / -3
Query: 5 QLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATG 178
QL+ELGNGL +SGKPF+WV+RSNE KLS +L +CKERGLIV +C QLEVLAHKATG
Sbjct: 652 QLEELGNGLYNSGKPFIWVVRSNEEHKLSNELRAKCKERGLIVSWCSQLEVLAHKATG 479
Score = 107 bits (229), Expect(3) = 1e-072
Identities = 36/50 (72%), Positives = 45/50 (90%)
Frame = +2 / -1
Query: 176 GCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMRK 325
GCF THCGWNST+E++ +GVPMVA+P WADQPT +KY+ES WG+GVR+RK
Sbjct: 387 GCFFTHCGWNSTLEAVVNGVPMVAIPHWADQPTISKYMESIWGLGVRVRK 238
Score = 97.3 bits (206), Expect(3) = 1e-072
Identities = 40/67 (59%), Positives = 47/67 (70%)
Frame = +2 / -1
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYLPK 502
KG + R EVERCI++VM G+RK Y NA WM KAKEAMQ GGSSDKN+ EF AKY
Sbjct: 231 KGLVTRDEVERCIKDVMDGDRKDNYRMNATMWMQKAKEAMQNGGSSDKNVCEFVAKYSSN 52
Query: 503 *ISDYVL 523
* S ++
Sbjct: 51 *FSKLII 31
Score = 87.7 bits (185), Expect(3) = 2e-047
Identities = 39/60 (65%), Positives = 42/60 (70%)
Frame = -3 / +2
Query: 501 FGKYLAANSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFLTKEPF 322
F +Y A NS FLSELPP CMASLA CI AF+ FLSP ITSLMHLSTS L +PF
Sbjct: 53 FDEYFATNSQTFLSELPPFCMASLAFCIHIVAFIL*LSFLSPSITSLMHLSTSSLVTKPF 232
Score = 86.8 bits (183), Expect(3) = 2e-047
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = -3 / +2
Query: 321 RMRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQP 175
R RTP PH LS Y +VGWSA GIATIGTPL S VEFHPQCV+KQP
Sbjct: 242 RTRTPNPHMLSIYFDMVGWSAQCGIATIGTPLTTASSVEFHPQCVKKQP 388
Score = 58.3 bits (121), Expect(3) = 1e-027
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = -2 / +1
Query: 325 LPHAHPNPPRALHIFGRRRLVRPLGHRHHWNTTSDGFNRRVPPAVRQEATC 173
L H P ALHIF RLV P+ + HHW+T + F RRVP A+ +E TC
Sbjct: 238 LAHPDTQSPYALHIF*YGRLVCPVWYCHHWHTINYCFQRRVPSAMCEETTC 390
Score = 54.2 bits (112), Expect(3) = 2e-047
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = -3 / +3
Query: 177 PVALCASTSS*GQKGTMRPLSLHLPPSCRDSFSASLDLSTQTKGL 43
PVALCA TSS + T+RP SLHL S D+ +S DL+TQ GL
Sbjct: 480 PVALCARTSSWEHQETIRPRSLHLARSSLDNLCSSFDLTTQMNGL 614
Score = 52.8 bits (109), Expect(3) = 1e-027
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = -2 / +2
Query: 178 TCGLVCQHLELRTEGDNEAPFLAPATELSRQFFCLVGPQHPNERLAGIAQSVAEL 14
TCG +C + EL +++A FLA T+ QF V P +PNE A I QS+A+L
Sbjct: 479 TCGFMC*NFELGAPRNDKATFLALGTKFIGQFVFFV*PHNPNEWFARIVQSIAQL 643
Score = 50.6 bits (104), Expect(3) = 1e-027
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = -2 / +1
Query: 505 LLW*ILGCEFCNVLVRASSFLHGLLGLVHPTSGI 404
L+ *IL EF N+LVRA S LHG LGL+HP SG+
Sbjct: 49 LI**ILRHEFTNILVRAPSILHGFLGLLHPHSGV 150
>gb|CW150107.1|CW150107 104_549_11142853_148_36304_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11142853, DNA
sequence
Length = 701
Score = 205 bits (442), Expect(2) = 2e-066
Identities = 76/107 (71%), Positives = 96/107 (89%)
Frame = +2 / +3
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGC 181
++L ELG+GLCDSG+PF+WV+RS EA+KLS+ LG RC+E+GLIV +CPQL+VL+HKATGC
Sbjct: 252 DELYELGSGLCDSGRPFIWVVRSGEAQKLSQDLGERCREKGLIVSWCPQLDVLSHKATGC 431
Query: 182 FLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMR 322
F+THCGWNST E+I +GVPMV +P+ ADQPT AKYVESAW IG+RM+
Sbjct: 432 FITHCGWNSTTEAIVAGVPMVGLPRSADQPTAAKYVESAWRIGLRMQ 572
Score = 143 bits (306), Expect(2) = 7e-042
Identities = 62/92 (67%), Positives = 68/92 (73%)
Frame = -3 / -2
Query: 318 MRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*GQ 139
+R PI HALSTY A VGWSA G T+GTP + S+VEFHPQCV KQPVALC TSS*G
Sbjct: 568 IRRPILHALSTYFAAVGWSADRGKPTMGTPATIASVVEFHPQCVMKQPVALCDKTSS*GH 389
Query: 138 KGTMRPLSLHLPPSCRDSFSASLDLSTQTKGL 43
+ TMRP SLHL P DSF AS DL+TQ KGL
Sbjct: 388 QDTMRPFSLHLSPRSWDSFCASPDLTTQMKGL 293
Score = 113 bits (242), Expect(2) = 9e-026
Identities = 53/106 (50%), Positives = 63/106 (59%)
Frame = -2 / -1
Query: 319 HAHPNPPRALHIFGRRRLVRPLGHRHHWNTTSDGFNRRVPPAVRQEATCGLVCQHLELRT 140
H +PPRALH+ RR LVR HH + D RRVPPAVR EA CGL+ Q + LR
Sbjct: 569 HPQTDPPRALHVLRRRWLVRRPRQAHHGHAGDDRLRRRVPPAVRDEAACGLMRQDI*LRA 390
Query: 139 EGDNEAPFLAPATELSRQFFCLVGPQHPNERLAGIAQSVAELVQLL 2
G +EA AP E+ Q L GP P+E AGIAQ AELV+L+
Sbjct: 389 PGHDEALLPAPLAEVLGQLLRLAGPHDPDEGPAGIAQPAAELVELV 252
Score = 101 bits (216), Expect(2) = 8e-022
Identities = 48/96 (50%), Positives = 56/96 (58%)
Frame = +3 / +1
Query: 3 SSWTSSATDCAIPASLSFGC*GPTRQKNCLDSSVAGARKGASLSPSVLSSRCWHTRPQVA 182
+S TSSA CAIPA S G *GP R+++C +S GA + AS P LS RPQ A
Sbjct: 253 TSSTSSAAGCAIPAGPSSGS*GPARRRSCPKTSARGAGRRASSCPGALS*MSCRIRPQAA 432
Query: 183 S*RTAGGTRRLNPSLVVFQWWRCPSGRTSRRRPNMW 290
S RTAGGTRR S WW C RTS+RR + W
Sbjct: 433 SSRTAGGTRRRRRSSPACPWWACRGRRTSQRRRSTW 540
Score = 68.9 bits (144), Expect(2) = 2e-066
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +2 / +3
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAM 442
KG + R+EVERCIREVM GERK + +NAARWM KAKEAM
Sbjct: 582 KGLVRREEVERCIREVMEGERKDEFRQNAARWMKKAKEAM 701
Score = 48.7 bits (100), Expect(2) = 7e-042
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = -3 / -2
Query: 441 MASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFLTKEPF 322
+ASLA I AAF + FLSP ITS MHLSTS L +PF
Sbjct: 700 IASLAFFIHLAAFCLNSSFLSPSITSRMHLSTSSLLTKPF 581
Score = 24.0 bits (46), Expect(2) = 9e-026
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 434 PWPCASNERHSSRTH 390
PWP +S HS+ TH
Sbjct: 693 PWPSSSISPHSA*TH 649
Score = 22.6 bits (43), Expect(2) = 8e-022
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / +2
Query: 385 EACVREECRSLDAQGQG 435
E V+ EC +D +GQG
Sbjct: 644 EG*VQAECGEMDEEGQG 694
>gb|CD424348.1|CD424348 SA1_5_E09.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_5_E09_A002 3', mRNA sequence
Length = 606
Score = 170 bits (365), Expect(2) = 6e-064
Identities = 63/87 (72%), Positives = 75/87 (86%)
Frame = +2 / +2
Query: 65 RSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMV 244
RSNE KLS +L +CKERGLIV +C QLEVLAHKATGCF THCGWNST+E++ +GVPMV
Sbjct: 17 RSNEEHKLSNELRAKCKERGLIVSWCSQLEVLAHKATGCFFTHCGWNSTLEAVVNGVPMV 196
Query: 245 AMPQWADQPTTAKYVESAWGIGVRMRK 325
A+P WADQPT +KY+ES WG+GVR+RK
Sbjct: 197 AIPHWADQPTISKYMESIWGLGVRVRK 277
Score = 125 bits (268), Expect(2) = 3e-048
Identities = 55/86 (63%), Positives = 61/86 (70%)
Frame = -3 / -1
Query: 321 RMRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*G 142
R RTP PH LS Y +VGWSA GIATIGTPL S VEFHPQCV+KQPVALCA TSS
Sbjct: 273 RTRTPNPHMLSIYFDMVGWSAQCGIATIGTPLTTASSVEFHPQCVKKQPVALCARTSSWE 94
Query: 141 QKGTMRPLSLHLPPSCRDSFSASLDL 64
+ T+RP SLHL S D+ +S DL
Sbjct: 93 HQETIRPRSLHLARSSLDNLCSSFDL 16
Score = 95.5 bits (202), Expect(2) = 6e-064
Identities = 40/63 (63%), Positives = 45/63 (71%)
Frame = +2 / +2
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYLPK 502
KG + R EVERCI++VM G+RK Y NA WM KAKEAMQ GGSSDKN+ EF AKY
Sbjct: 284 KGLVTRDEVERCIKDVMDGDRKDNYRMNAPMWMQKAKEAMQNGGSSDKNVCEFVAKYSSN 463
Query: 503 *IS 511
* S
Sbjct: 464 *FS 472
Score = 87.7 bits (185), Expect(2) = 3e-048
Identities = 39/60 (65%), Positives = 42/60 (70%)
Frame = -3 / -1
Query: 501 FGKYLAANSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFLTKEPF 322
F +Y A NS FLSELPP CMASLA CI AF+ FLSP ITSLMHLSTS L +PF
Sbjct: 462 FDEYFATNSQTFLSELPPFCMASLAFCIHIGAFIL*LSFLSPSITSLMHLSTSSLVTKPF 283
Score = 81.7 bits (172), Expect(2) = 2e-023
Identities = 38/87 (43%), Positives = 50/87 (57%)
Frame = -2 / -3
Query: 325 LPHAHPNPPRALHIFGRRRLVRPLGHRHHWNTTSDGFNRRVPPAVRQEATCGLVCQHLEL 146
L H P ALHIF RLV P+ + HHW+T + F RRVP A+ +E TCG +C + EL
Sbjct: 277 LAHPDTQSPYALHIF*YGRLVCPVWYCHHWHTINYCFQRRVPSAMCEETTCGFMC*NFEL 98
Query: 145 RTEGDNEAPFLAPATELSRQFFCLVGP 65
+++A FLA T+ QF V P
Sbjct: 97 GAPRNDKATFLALGTKFIGQFVFFV*P 17
Score = 48.3 bits (99), Expect(2) = 2e-023
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = -2 / -3
Query: 505 LLW*ILGCEFCNVLVRASSFLHGLLGLVHPTSGI 404
L+ *IL EF N+LVRA S LHG LGL+HP G+
Sbjct: 466 LI**ILRHEFTNILVRAPSILHGFLGLLHPHRGV 365
>gb|AW677595.1|AW677595 DG1_8_E07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 530
Score = 135 bits (289), Expect(2) = 4e-063
Identities = 50/68 (73%), Positives = 61/68 (89%)
Frame = +2 / +3
Query: 119 RGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESA 298
+GLIV +CPQL+VL+HKATGCF+THCGWNST E+I +GVPMV +P+ ADQPT AKYVESA
Sbjct: 3 KGLIVSWCPQLDVLSHKATGCFITHCGWNSTTEAIVAGVPMVGLPRSADQPTAAKYVESA 182
Query: 299 WGIGVRMR 322
W IG+RM+
Sbjct: 183 WRIGLRMQ 206
Score = 127 bits (272), Expect(2) = 4e-063
Identities = 55/68 (80%), Positives = 60/68 (88%)
Frame = +2 / +3
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYLPK 502
KG + R+EVERCIREVM GERK + +NAARWM KAKEAMQEGGSSDKNIAEFAAKYLPK
Sbjct: 216 KGLVRREEVERCIREVMEGERKDEFRQNAARWMKKAKEAMQEGGSSDKNIAEFAAKYLPK 395
Query: 503 *ISDYVLL 526
*ISDY +L
Sbjct: 396 *ISDYYVL 419
Score = 108 bits (230), Expect(2) = 3e-048
Identities = 45/66 (68%), Positives = 50/66 (75%)
Frame = -3 / -2
Query: 318 MRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*GQ 139
+R PI HALSTY A VGWSA G T+GTP + S+VEFHPQCV KQPVALC TSS*G
Sbjct: 202 IRRPILHALSTYFAAVGWSADRGKPTMGTPATIASVVEFHPQCVMKQPVALCDKTSS*GH 23
Query: 138 KGTMRP 121
+ TMRP
Sbjct: 22 QDTMRP 5
Score = 104 bits (222), Expect(2) = 3e-048
Identities = 48/65 (73%), Positives = 51/65 (78%)
Frame = -3 / -2
Query: 516 *SEIYFGKYLAANSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFL 337
*SEIYFGKY AANSAMFLSELPPSC+ASLA I AAF + FLSP ITS MHLSTS L
Sbjct: 409 *SEIYFGKYFAANSAMFLSELPPSCIASLAFFIHLAAFCLNSSFLSPSITSRMHLSTSSL 230
Query: 336 TKEPF 322
+PF
Sbjct: 229 LTKPF 215
Score = 78.0 bits (164), Expect(2) = 2e-028
Identities = 34/66 (51%), Positives = 40/66 (60%)
Frame = -2 / -1
Query: 319 HAHPNPPRALHIFGRRRLVRPLGHRHHWNTTSDGFNRRVPPAVRQEATCGLVCQHLELRT 140
H +PPRALH+ RR LVR HH + D RRVPPAVR EA CGL+ Q + LR
Sbjct: 203 HPQTDPPRALHVLRRRWLVRRPRQAHHGHAGDDRLRRRVPPAVRDEAACGLMRQDI*LRA 24
Query: 139 EGDNEA 122
G +EA
Sbjct: 23 PGHDEA 6
Score = 68.4 bits (143), Expect(2) = 2e-028
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = -1 / -3
Query: 518 HNRKSTLVNTWLRILQCSCQSFLLPAWPPWPCASNERHSSRTH 390
+NRKSTLVNT L+I QCSCQS LLPA PWP +S HS+ TH
Sbjct: 411 NNRKSTLVNTLLQIQQCSCQSSLLPASLPWPSSSISPHSA*TH 283
Score = 68.0 bits (142), Expect(2) = 5e-023
Identities = 29/44 (65%), Positives = 34/44 (77%)
Frame = +1 / +2
Query: 385 EACVREECRSLDAQGQGGHAGRRKL*QEHCRIRSQVFTKVDFRL 516
E V+ EC +D +GQG AGRR+L*QEHC I S+VFTKVDFRL
Sbjct: 278 EG*VQAECGEMDEEGQGSDAGRREL*QEHC*ICSKVFTKVDFRL 409
Score = 60.6 bits (126), Expect(2) = 5e-023
Identities = 28/56 (50%), Positives = 30/56 (53%)
Frame = +3 / +1
Query: 123 ASLSPSVLSSRCWHTRPQVAS*RTAGGTRRLNPSLVVFQWWRCPSGRTSRRRPNMW 290
AS P LS RPQ AS RTAGGTRR S WW C RTS+RR + W
Sbjct: 7 ASSCPGALS*MSCRIRPQAASSRTAGGTRRRRRSSPACPWWACRGRRTSQRRRSTW 174
>gb|CW404739.1|CW404739 fsbb001f097a06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f097a06, DNA
sequence
Length = 690
Score = 166 bits (358), Expect(2) = 7e-058
Identities = 60/106 (56%), Positives = 79/106 (74%)
Frame = +2 / -2
Query: 5 QLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCF 184
Q+ E+ GL SGKPF+WV+R++E K+ + + ERGL+ + QLEVLAH A GCF
Sbjct: 593 QMAEVAEGLYSSGKPFLWVVRASETSKIPDKFADKANERGLVATWSAQLEVLAHPAVGCF 414
Query: 185 LTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMR 322
+THCGWNST E +++GVPMVAMPQW+DQP AKY+E W +GVR+R
Sbjct: 413 VTHCGWNSTTEGLSAGVPMVAMPQWSDQPVNAKYIEDVWRVGVRVR 276
Score = 96.8 bits (205), Expect(2) = 1e-033
Identities = 46/106 (43%), Positives = 56/106 (52%)
Frame = -2 / +3
Query: 322 PHAHPNPPRALHIFGRRRLVRPLGHRHHWNTTSDGFNRRVPPAVRQEATCGLVCQHLELR 143
PH H + P L + G L+RPL HRHH + + RRVPPA+R EA G V HL+LR
Sbjct: 276 PHPHAHSPHILDVLGVHGLIRPLRHRHHGHAGAQSLRRRVPPAMRHEAPNGRVR*HLQLR 455
Query: 142 TEGDNEAPFLAPATELSRQFFCLVGPQHPNERLAGIAQSVAELVQL 5
NEA + EL R L P P ERLAG Q++ L L
Sbjct: 456 APRRNEASLVRLVGELVRDLGRLRRPNDPQERLAGAVQALRHLGHL 593
Score = 78.5 bits (165), Expect(2) = 7e-058
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = +2 / -2
Query: 320 RKGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAK 490
+ G + ++EVERC+REVM GER Y +NAA W KA++AM GGSSD NI EF K
Sbjct: 269 KDGVVRKEEVERCVREVMDGERSMEYQQNAADWKEKARKAMSAGGSSDNNIKEFLGK 99
Score = 67.5 bits (141), Expect(2) = 1e-033
Identities = 33/59 (55%), Positives = 35/59 (59%)
Frame = -3 / +1
Query: 501 FGKYLAANSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFLTKEP 325
F L NS M LSELPP+ MA LA Q AAF Y+ LSP ITSL HLSTS P
Sbjct: 88 FSPSLPRNSLMLLSELPPALMAFLAFSFQSAAFC*YSMLLSPSITSLTHLSTSSFLTTP 264
>gb|CN144834.1|CN144834 WOUND1_25_E11.b2_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_25_E11_A002 3', mRNA sequence
Length = 631
Score = 166 bits (358), Expect(2) = 7e-058
Identities = 60/106 (56%), Positives = 79/106 (74%)
Frame = +2 / +1
Query: 5 QLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCF 184
Q+ E+ GL SGKPF+WV+R++E K+ + + ERGL+ + QLEVLAH A GCF
Sbjct: 16 QMAEVAEGLYSSGKPFLWVVRASETSKIPDKFADKANERGLVATWSAQLEVLAHPAVGCF 195
Query: 185 LTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMR 322
+THCGWNST E +++GVPMVAMPQW+DQP AKY+E W +GVR+R
Sbjct: 196 VTHCGWNSTTEGLSAGVPMVAMPQWSDQPVNAKYIEDVWRVGVRVR 333
Score = 96.8 bits (205), Expect(2) = 1e-033
Identities = 46/106 (43%), Positives = 56/106 (52%)
Frame = -2 / -2
Query: 322 PHAHPNPPRALHIFGRRRLVRPLGHRHHWNTTSDGFNRRVPPAVRQEATCGLVCQHLELR 143
PH H + P L + G L+RPL HRHH + + RRVPPA+R EA G V HL+LR
Sbjct: 333 PHPHAHSPHILDVLGVHGLIRPLRHRHHGHAGAQSLRRRVPPAMRHEAPNGRVR*HLQLR 154
Query: 142 TEGDNEAPFLAPATELSRQFFCLVGPQHPNERLAGIAQSVAELVQL 5
NEA + EL R L P P ERLAG Q++ L L
Sbjct: 153 APRRNEASLVRLVGELVRDLGRLRRPNDPQERLAGAVQALRHLGHL 16
Score = 78.5 bits (165), Expect(2) = 7e-058
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = +2 / +1
Query: 320 RKGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAK 490
+ G + ++EVERC+REVM GER Y +NAA W KA++AM GGSSD NI EF K
Sbjct: 340 KDGVVRKEEVERCVREVMDGERSMEYQQNAADWKEKARKAMSAGGSSDNNIKEFLGK 510
Score = 67.5 bits (141), Expect(2) = 1e-033
Identities = 33/59 (55%), Positives = 35/59 (59%)
Frame = -3 / -3
Query: 501 FGKYLAANSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFLTKEP 325
F L NS M LSELPP+ MA LA Q AAF Y+ LSP ITSL HLSTS P
Sbjct: 521 FSPSLPRNSLMLLSELPPALMAFLAFSFQSAAFC*YSMLLSPSITSLTHLSTSSFLTTP 345
>gb|CB928358.1|CB928358 ABA1_15_H11.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_15_H11_A012 3', mRNA sequence
Length = 679
Score = 166 bits (358), Expect(2) = 9e-058
Identities = 60/106 (56%), Positives = 79/106 (74%)
Frame = +2 / +3
Query: 5 QLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCF 184
Q+ E+ GL SGKPF+WV+R++E K+ + + ERGL+ + QLEVLAH A GCF
Sbjct: 12 QMAEVAEGLYSSGKPFLWVVRASETSKIPDKFADKANERGLVATWSAQLEVLAHPAVGCF 191
Query: 185 LTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMR 322
+THCGWNST E +++GVPMVAMPQW+DQP AKY+E W +GVR+R
Sbjct: 192 VTHCGWNSTTEGLSAGVPMVAMPQWSDQPVNAKYIEDVWRVGVRVR 329
Score = 96.8 bits (205), Expect(2) = 5e-033
Identities = 46/106 (43%), Positives = 56/106 (52%)
Frame = -2 / -3
Query: 322 PHAHPNPPRALHIFGRRRLVRPLGHRHHWNTTSDGFNRRVPPAVRQEATCGLVCQHLELR 143
PH H + P L + G L+RPL HRHH + + RRVPPA+R EA G V HL+LR
Sbjct: 329 PHPHAHSPHILDVLGVHGLIRPLRHRHHGHAGAQSLRRRVPPAMRHEAPNGRVR*HLQLR 150
Query: 142 TEGDNEAPFLAPATELSRQFFCLVGPQHPNERLAGIAQSVAELVQL 5
NEA + EL R L P P ERLAG Q++ L L
Sbjct: 149 APRRNEASLVRLVGELVRDLGRLRRPNDPQERLAGAVQALRHLGHL 12
Score = 78.0 bits (164), Expect(2) = 9e-058
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = +2 / +3
Query: 320 RKGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAK 490
+ G + ++EVERC+REVM G+R Y +NAA W KA++AM GGSSD NI EF K
Sbjct: 336 KDGVVRKEEVERCVREVMDGDRSMEYQQNAAEWKEKARKAMSAGGSSDNNIKEFLGK 506
Score = 65.2 bits (136), Expect(2) = 5e-033
Identities = 32/59 (54%), Positives = 34/59 (57%)
Frame = -3 / -1
Query: 501 FGKYLAANSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFLTKEP 325
F L NS M LSELPP+ MA LA AAF Y+ LSP ITSL HLSTS P
Sbjct: 517 FSPSLPRNSLMLLSELPPALMAFLAFSFHSAAFC*YSMLLSPSITSLTHLSTSSFLTTP 341
>gb|CD227847.1|CD227847 CCC1_56_A04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_56_A04_A007 3', mRNA sequence
Length = 630
Score = 156 bits (335), Expect(2) = 9e-055
Identities = 55/94 (58%), Positives = 72/94 (76%)
Frame = +2 / +1
Query: 41 GKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIES 220
GKPF+WV+R++E K+ + + ERGL+ + QLEVLAH A GCF+THCGWNST E
Sbjct: 1 GKPFLWVVRASETSKIPDKFADKANERGLVATWSAQLEVLAHPAVGCFVTHCGWNSTTEG 180
Query: 221 IASGVPMVAMPQWADQPTTAKYVESAWGIGVRMR 322
+++GVPMVAMPQW+DQP AKY+E W +GVR+R
Sbjct: 181 LSAGVPMVAMPQWSDQPVNAKYIEDVWRVGVRVR 282
Score = 95.5 bits (202), Expect(2) = 3e-033
Identities = 47/93 (50%), Positives = 51/93 (54%)
Frame = -3 / -2
Query: 321 RMRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*G 142
R RTP H S YLA G S H GIAT+GTP S+VEFHPQCV K P A CASTSS
Sbjct: 281 RTRTPTLHTSSMYLAFTG*SDHCGIATMGTPALSPSVVEFHPQCVTKHPTAGCASTSSCA 102
Query: 141 QKGTMRPLSLHLPPSCRDSFSASLDLSTQTKGL 43
RPLS L + S L+T GL
Sbjct: 101 LHVATRPLSFALSANLSGILDVSDALTTHRNGL 3
Score = 78.5 bits (165), Expect(2) = 9e-055
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = +2 / +1
Query: 320 RKGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAK 490
+ G + ++EVERC+REVM GER Y +NAA W KA++AM GGSSD NI EF K
Sbjct: 289 KDGVVRKEEVERCVREVMDGERSMEYQQNAADWKEKARKAMSAGGSSDNNIKEFLGK 459
Score = 67.5 bits (141), Expect(2) = 3e-033
Identities = 33/59 (55%), Positives = 35/59 (59%)
Frame = -3 / -2
Query: 501 FGKYLAANSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFLTKEP 325
F L NS M LSELPP+ MA LA Q AAF Y+ LSP ITSL HLSTS P
Sbjct: 470 FSPSLPRNSLMLLSELPPALMAFLAFSFQSAAFC*YSMLLSPSITSLTHLSTSSFLTTP 294
>gb|BZ340250.1|BZ340250 ic37f08.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic37f08 5', DNA sequence
Length = 602
Score = 137 bits (293), Expect(3) = 1e-054
Identities = 48/70 (68%), Positives = 60/70 (85%)
Frame = +2 / -2
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
++RGL+V +CPQLEVLAH+A GCFLTHCGWNST E++ +GVPMVA+PQW DQP A+YVE
Sbjct: 469 RQRGLVVSWCPQLEVLAHRAVGCFLTHCGWNSTAEALVTGVPMVAVPQWTDQPMNAEYVE 290
Query: 293 SAWGIGVRMR 322
+ W +GVR R
Sbjct: 289 AVWRVGVRAR 260
Score = 95.9 bits (203), Expect(2) = 6e-035
Identities = 40/67 (59%), Positives = 43/67 (64%)
Frame = -3 / +3
Query: 321 RMRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*G 142
R RTP H STY A +GWS H G AT+GTP+ S VEF PQCVRK P A CASTSS G
Sbjct: 261 RARTPTRHTASTYSAFMGWSVHCGTATMGTPVTSASAVEFQPQCVRKHPTARCASTSSCG 440
Query: 141 QKGTMRP 121
T P
Sbjct: 441 HHDTTSP 461
Score = 73.5 bits (154), Expect(3) = 1e-054
Identities = 33/56 (58%), Positives = 38/56 (67%)
Frame = +2 / -2
Query: 326 GSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKY 493
G + R EV R I EVM G+R Y NA WM KA+ A +EGGSSD+NIAEF AKY
Sbjct: 244 GLVRRGEVARGIEEVMDGDRSAEYRSNADVWMEKARAASREGGSSDRNIAEFVAKY 77
Score = 72.5 bits (152), Expect(2) = 6e-035
Identities = 34/56 (60%), Positives = 39/56 (69%)
Frame = -3 / +3
Query: 492 YLAANSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFLTKEP 325
YLA NSAMFLSELPPS +A+LA I +A L Y+ LSP ITS M L+TS L P
Sbjct: 78 YLATNSAMFLSELPPSLLAALAFSIHTSALLLYSALLSPSITSSMPLATSPLRTRP 245
Score = 42.8 bits (87), Expect(3) = 1e-054
Identities = 13/28 (46%), Positives = 23/28 (82%)
Frame = +2 / -2
Query: 5 QLDELGNGLCDSGKPFVWVLRSNEAEKL 88
++ E+ +GL D+G+PF+WV+R++E KL
Sbjct: 598 EMQEIAHGLLDAGRPFLWVVRASETHKL 515
>gb|CW412590.1|CW412590 fsbb001f108e18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f108e18, DNA
sequence
Length = 733
Score = 138 bits (295), Expect(2) = 1e-049
Identities = 50/70 (71%), Positives = 58/70 (82%)
Frame = +2 / -3
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
+ERGLIV +CPQLEVLAH A GCF+THCGWNST+E + GVPMVAMPQW+DQP AKY+E
Sbjct: 644 EERGLIVAWCPQLEVLAHPAVGCFVTHCGWNSTMEGLGIGVPMVAMPQWSDQPMNAKYIE 465
Query: 293 SAWGIGVRMR 322
W +GVR R
Sbjct: 464 DVWRVGVRAR 435
Score = 101 bits (216), Expect(2) = 1e-033
Identities = 44/69 (63%), Positives = 47/69 (68%)
Frame = -3 / +1
Query: 321 RMRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*G 142
R TP H S YLA +GWS H G+ATIGTP+ SIVEF PQCV KQP A CASTSS G
Sbjct: 436 RALTPTLHTSSMYLAFIGWSDHCGMATIGTPMPNPSIVEFQPQCVTKQPTAGCASTSSCG 615
Query: 141 QKGTMRPLS 115
TM PLS
Sbjct: 616 HHATMSPLS 642
Score = 79.4 bits (167), Expect(2) = 1e-049
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = +2 / -3
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKY 493
+G + + EVERC+R+VM GE+ Y NA W KAK AM EGGSSD+NI EF K+
Sbjct: 425 EGVIRKDEVERCVRQVMDGEKSKEYMENAMNWREKAKRAMSEGGSSDRNIIEFLGKF 255
Score = 62.5 bits (130), Expect(2) = 1e-033
Identities = 29/46 (63%), Positives = 31/46 (67%)
Frame = -3 / +1
Query: 480 NSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTS 343
NS MFLSELPPS MA LA +Q AF Y+ SP IT L HLSTS
Sbjct: 268 NSIMFLSELPPSLMALLAFSLQFIAFSMYSLLFSPSITCLTHLSTS 405
>gb|CD223127.1|CD223127 CCC1_26_D11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_26_D11_A007 3', mRNA sequence
Length = 652
Score = 138 bits (295), Expect(2) = 1e-049
Identities = 50/70 (71%), Positives = 58/70 (82%)
Frame = +2 / +3
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
+ERGLIV +CPQLEVLAH A GCF+THCGWNST+E + GVPMVAMPQW+DQP AKY+E
Sbjct: 60 EERGLIVAWCPQLEVLAHPAVGCFVTHCGWNSTMEGLGIGVPMVAMPQWSDQPMNAKYIE 239
Query: 293 SAWGIGVRMR 322
W +GVR R
Sbjct: 240 DVWRVGVRAR 269
Score = 101 bits (216), Expect(2) = 1e-033
Identities = 44/69 (63%), Positives = 47/69 (68%)
Frame = -3 / -1
Query: 321 RMRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*G 142
R TP H S YLA +GWS H G+ATIGTP+ SIVEF PQCV KQP A CASTSS G
Sbjct: 268 RALTPTLHTSSMYLAFIGWSDHCGMATIGTPMPNPSIVEFQPQCVTKQPTAGCASTSSCG 89
Query: 141 QKGTMRPLS 115
TM PLS
Sbjct: 88 HHATMSPLS 62
Score = 79.4 bits (167), Expect(2) = 1e-049
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = +2 / +3
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKY 493
+G + + EVERC+R+VM GE+ Y NA W KAK AM EGGSSD+NI EF K+
Sbjct: 279 EGVIRKDEVERCVRQVMDGEKSKEYMENAMNWREKAKRAMSEGGSSDRNIIEFLGKF 449
Score = 62.5 bits (130), Expect(2) = 1e-033
Identities = 29/46 (63%), Positives = 31/46 (67%)
Frame = -3 / -1
Query: 480 NSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTS 343
NS MFLSELPPS MA LA +Q AF Y+ SP IT L HLSTS
Sbjct: 436 NSIMFLSELPPSLMALLAFSLQFIAFSMYSLLFSPSITCLTHLSTS 299
>gb|BE599295.1|BE599295 PI1_87_G04.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 614
Score = 137 bits (293), Expect(2) = 2e-047
Identities = 48/70 (68%), Positives = 60/70 (85%)
Frame = +2 / +3
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
++RGL+V +CPQLEVLAH+A GCFLTHCGWNST E++ +GVPMVA+PQW DQP A+YVE
Sbjct: 75 RQRGLVVSWCPQLEVLAHRAVGCFLTHCGWNSTAEALVTGVPMVAVPQWTDQPMNAEYVE 254
Query: 293 SAWGIGVRMR 322
+ W +GVR R
Sbjct: 255 AVWRVGVRAR 284
Score = 95.9 bits (203), Expect(2) = 6e-035
Identities = 40/67 (59%), Positives = 43/67 (64%)
Frame = -3 / -2
Query: 321 RMRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*G 142
R RTP H STY A +GWS H G AT+GTP+ S VEF PQCVRK P A CASTSS G
Sbjct: 283 RARTPTRHTASTYSAFMGWSVHCGTATMGTPVTSASAVEFQPQCVRKHPTARCASTSSCG 104
Query: 141 QKGTMRP 121
T P
Sbjct: 103 HHDTTSP 83
Score = 73.5 bits (154), Expect(2) = 2e-047
Identities = 33/56 (58%), Positives = 38/56 (67%)
Frame = +2 / +3
Query: 326 GSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKY 493
G + R EV R I EVM G+R Y NA WM KA+ A +EGGSSD+NIAEF AKY
Sbjct: 300 GLVRRGEVARGIEEVMDGDRSAEYRSNADVWMEKARAASREGGSSDRNIAEFVAKY 467
Score = 72.5 bits (152), Expect(2) = 6e-035
Identities = 34/56 (60%), Positives = 39/56 (69%)
Frame = -3 / -2
Query: 492 YLAANSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFLTKEP 325
YLA NSAMFLSELPPS +A+LA I +A L Y+ LSP ITS M L+TS L P
Sbjct: 466 YLATNSAMFLSELPPSLLAALAFSIHTSALLLYSALLSPSITSSMPLATSPLRTRP 299
>gb|CD212039.1|CD212039 HS1_68_G01.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_68_G01_A012 3', mRNA sequence
Length = 562
Score = 132 bits (283), Expect(2) = 2e-047
Identities = 47/74 (63%), Positives = 58/74 (78%)
Frame = +2 / +1
Query: 107 RCKERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKY 286
+ ERGL+ + QLEVLAH A GCF+THCGWNST E +++GVPMVAMPQW+DQP AKY
Sbjct: 1 KANERGLVATWSAQLEVLAHPAVGCFVTHCGWNSTTEGLSAGVPMVAMPQWSDQPVNAKY 180
Query: 287 VESAWGIGVRMRKG 328
+E W +GVR+R G
Sbjct: 181 IEDVWRVGVRVRPG 222
Score = 91.3 bits (193), Expect(2) = 2e-031
Identities = 42/71 (59%), Positives = 44/71 (61%)
Frame = -3 / -3
Query: 327 PFRMRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS 148
P R RTP H S YLA G S H GIAT+GTP S+VEFHPQCV K P A CASTSS
Sbjct: 221 PGRTRTPTLHTSSMYLAFTG*SDHCGIATMGTPALSPSVVEFHPQCVTKHPTAGCASTSS 42
Query: 147 *GQKGTMRPLS 115
RPLS
Sbjct: 41 CALHVATRPLS 9
Score = 78.0 bits (164), Expect(2) = 2e-047
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = +2 / +1
Query: 320 RKGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAK 490
+ G + ++EVERC+REVM G+R Y +NAA W KA++AM GGSSD NI EF K
Sbjct: 223 KDGVVRKEEVERCVREVMDGDRSMEYQQNAAEWKEKARKAMSAGGSSDNNIKEFLGK 393
Score = 65.2 bits (136), Expect(2) = 2e-031
Identities = 32/59 (54%), Positives = 34/59 (57%)
Frame = -3 / -3
Query: 501 FGKYLAANSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFLTKEP 325
F L NS M LSELPP+ MA LA AAF Y+ LSP ITSL HLSTS P
Sbjct: 404 FSPSLPRNSLMLLSELPPALMAFLAFSFHSAAFC*YSMLLSPSITSLTHLSTSSFLTTP 228
>gb|CW496055.1|CW496055 fsbb001f288b11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f288b11, DNA
sequence
Length = 555
Score = 133 bits (285), Expect(3) = 5e-047
Identities = 46/68 (67%), Positives = 58/68 (85%)
Frame = +2 / -2
Query: 119 RGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESA 298
RGL+V +CPQLEVLAH A GCF THCGWNST+E++++GVPMVAMP W+DQ T AKY++
Sbjct: 359 RGLLVSWCPQLEVLAHPAVGCFFTHCGWNSTVEALSAGVPMVAMPDWSDQTTNAKYIQDV 180
Query: 299 WGIGVRMR 322
W +GVR+R
Sbjct: 179 WRVGVRVR 156
Score = 89.5 bits (189), Expect(2) = 1e-023
Identities = 44/90 (48%), Positives = 50/90 (55%)
Frame = -3 / +1
Query: 321 RMRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*G 142
R RTP H YLA V WS GIAT+GTP S VEF PQCV+KQP A CA TSS G
Sbjct: 157 RTRTPTRHTSWMYLAFVVWSDQSGIATMGTPALSASTVEFQPQCVKKQPTAGCARTSSCG 336
Query: 141 QKGTMRPLSLHLPPSCRDSFSASLDLSTQT 52
T PL L S + S S + ++ T
Sbjct: 337 HHDTRSPLLASLALSAKPSGSLPVSVARTT 426
Score = 49.6 bits (102), Expect(3) = 5e-047
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +2 / -2
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGG 454
+G + +EVERC+R+VM GE + A W KA++AM EGG
Sbjct: 146 RGVVRSEEVERCVRDVMEGEMGKEFRNRALDWSGKARKAMSEGG 15
Score = 44.1 bits (90), Expect(3) = 5e-047
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2 / -2
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKE 118
+Q+ E+ GL SGKPF+WV+R+ E KL + +E
Sbjct: 482 DQMGEIAEGLYGSGKPFLWVVRATETGKLPEGFADKARE 366
Score = 40.9 bits (83), Expect(2) = 1e-023
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = -3 / +1
Query: 453 PPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFLTKEP 325
PPS MA LAL +Q A + +SP +TS HLSTS L P
Sbjct: 16 PPSLMAFLALPLQSKALFLNSLPISPSMTSRTHLSTSSLLTTP 144
>gb|BG052249.1|BG052249 RHIZ2_12_A12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 527
Score = 188 bits (405), Expect = 6e-047
Identities = 69/97 (71%), Positives = 87/97 (89%)
Frame = +2 / +3
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGC 181
++L ELG+GLCDSG+PF+WV+RS EA+KLS+ LG RC+E+GLIV +CPQL+VL+HKATGC
Sbjct: 126 DELHELGSGLCDSGRPFIWVVRSGEAQKLSQDLGERCREKGLIVSWCPQLDVLSHKATGC 305
Query: 182 FLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
F+THCGWNST E+I +GVPMV +P+ ADQPT AKYVE
Sbjct: 306 FITHCGWNSTTEAIVAGVPMVGLPRSADQPTAAKYVE 416
Score = 131 bits (281), Expect = 8e-030
Identities = 56/85 (65%), Positives = 63/85 (74%)
Frame = -3 / -2
Query: 297 ALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*GQKGTMRPL 118
++STY A VGWSA G T+GTP + S+VEFHPQCV KQPVALC TSS*G + TMRP
Sbjct: 421 SISTYFAAVGWSADLGKPTMGTPATIASVVEFHPQCVMKQPVALCDKTSS*GHQDTMRPF 242
Query: 117 SLHLPPSCRDSFSASLDLSTQTKGL 43
SLHL P DSF AS DL+TQ KGL
Sbjct: 241 SLHLSPRSWDSFCASPDLTTQMKGL 167
>gb|CB926451.1|CB926451 ABA1_9_A08.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_9_A08_A012 3', mRNA sequence
Length = 568
Score = 130 bits (278), Expect(2) = 8e-047
Identities = 46/72 (63%), Positives = 57/72 (79%)
Frame = +2 / +2
Query: 107 RCKERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKY 286
+ ERGL+ + QLEVLAH A GCF+THCGWNST E +++GVPMVAMPQW+DQP AKY
Sbjct: 17 KANERGLVATWSAQLEVLAHPAVGCFVTHCGWNSTTEGLSAGVPMVAMPQWSDQPVNAKY 196
Query: 287 VESAWGIGVRMR 322
+E W +GVR+R
Sbjct: 197 IEDVWRVGVRVR 232
Score = 90.4 bits (191), Expect(2) = 4e-031
Identities = 42/72 (58%), Positives = 44/72 (61%)
Frame = -3 / -2
Query: 321 RMRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*G 142
R RTP H S YLA G S H GIAT+GTP S+VEFHPQCV K P A CASTSS
Sbjct: 231 RTRTPTLHTSSMYLAFTG*SDHCGIATMGTPALSPSVVEFHPQCVTKHPTAGCASTSSCA 52
Query: 141 QKGTMRPLSLHL 106
RPLS L
Sbjct: 51 LHVATRPLSFAL 16
Score = 78.0 bits (164), Expect(2) = 8e-047
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = +2 / +2
Query: 320 RKGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAK 490
+ G + ++EVERC+REVM G+R Y +NAA W KA++AM GGSSD NI EF K
Sbjct: 239 KDGVVRKEEVERCVREVMDGDRSMEYQQNAAEWKEKARKAMSAGGSSDNNIKEFLGK 409
Score = 65.2 bits (136), Expect(2) = 4e-031
Identities = 32/59 (54%), Positives = 34/59 (57%)
Frame = -3 / -2
Query: 501 FGKYLAANSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFLTKEP 325
F L NS M LSELPP+ MA LA AAF Y+ LSP ITSL HLSTS P
Sbjct: 420 FSPSLPRNSLMLLSELPPALMAFLAFSFHSAAFC*YSMLLSPSITSLTHLSTSSFLTTP 244
>gb|CW785094.1|CW785094 SP__Ba0007P10.f SP__Ba Sorghum propinquum genomic clone
SP__Ba0007P10 5', DNA sequence
Length = 878
Score = 133 bits (284), Expect(2) = 4e-046
Identities = 49/69 (71%), Positives = 56/69 (81%)
Frame = +2 / +1
Query: 116 ERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVES 295
ERGLIV + PQLEVLAH A GCF+THCGWNST+E + GVPMVAMPQW+DQP AKY+E
Sbjct: 37 ERGLIVAWSPQLEVLAHPAVGCFVTHCGWNSTMEGLGIGVPMVAMPQWSDQPMNAKYIED 216
Query: 296 AWGIGVRMR 322
W +GVR R
Sbjct: 217 VWRVGVRAR 243
Score = 103 bits (220), Expect(2) = 5e-033
Identities = 45/69 (65%), Positives = 48/69 (69%)
Frame = -3 / -1
Query: 321 RMRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*G 142
R TP H S YLA +GWS H G+ATIGTP+ SIVEF PQCV KQP A CASTSS G
Sbjct: 242 RALTPTLHTSSMYLAFIGWSDHCGMATIGTPMPNPSIVEFQPQCVTKQPTAGCASTSSCG 63
Query: 141 QKGTMRPLS 115
TMRPLS
Sbjct: 62 LHATMRPLS 36
Score = 73.0 bits (153), Expect(2) = 4e-046
Identities = 29/57 (50%), Positives = 36/57 (63%)
Frame = +2 / +1
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKY 493
+G + + EVERC+R+VM E Y NA W K K AM EGGSSD+NI EF K+
Sbjct: 253 EGVIRKDEVERCVRQVMDEENSKEYMENAMNWREKTKRAMSEGGSSDRNIIEFLGKF 423
Score = 58.3 bits (121), Expect(2) = 5e-033
Identities = 29/53 (54%), Positives = 31/53 (58%)
Frame = -3 / -1
Query: 501 FGKYLAANSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTS 343
F L NS MFLSELPPS MA L +Q AF Y+ S IT L HLSTS
Sbjct: 431 FHPNLPRNSIMFLSELPPSLMALLVFSLQFIAFSMYSLLFSSSITCLTHLSTS 273
>gb|CW395484.1|CW395484 fsbb001f083i14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f083i14, DNA
sequence
Length = 691
Score = 160 bits (345), Expect(2) = 7e-046
Identities = 61/86 (70%), Positives = 75/86 (87%)
Frame = +2 / -3
Query: 65 RSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMV 244
RS EA+K S+ LG RC+E+GLIV +CPQL+VL+HKATGCF+THCGWNST E+I +GVPMV
Sbjct: 287 RSGEAQKPSQDLGERCREKGLIVSWCPQLDVLSHKATGCFITHCGWNSTTEAIVAGVPMV 108
Query: 245 AMPQWADQPTTAKYVESAWGIGVRMR 322
+P+ ADQPT AKYVESAW IG+RM+
Sbjct: 107 GLPRSADQPTAAKYVESAWRIGLRMQ 30
Score = 128 bits (274), Expect(2) = 6e-034
Identities = 56/91 (61%), Positives = 62/91 (68%)
Frame = -3 / +1
Query: 318 MRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*GQ 139
+R PI HALSTY A VGWSA G T+GTP + S+VEFHPQCV KQPVALC TSS*G
Sbjct: 34 IRRPILHALSTYFAAVGWSADRGKPTMGTPATIASVVEFHPQCVMKQPVALCDKTSS*GH 213
Query: 138 KGTMRPLSLHLPPSCRDSFSASLDLSTQTKG 46
+ TMRP SLHL P D F AS D +G
Sbjct: 214 QDTMRPFSLHLSPRSWDGFCASPDRHDPDEG 306
Score = 44.1 bits (90), Expect(2) = 7e-046
Identities = 14/21 (66%), Positives = 20/21 (95%)
Frame = +2 / -2
Query: 2 EQLDELGNGLCDSGKPFVWVL 64
++L ELG+GLCDSG+PF+WV+
Sbjct: 351 DELYELGSGLCDSGRPFIWVV 289
Score = 36.8 bits (74), Expect(2) = 6e-034
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -1 / +3
Query: 65 SAPKRKACRNRTVRCRARPA 6
S P+ +ACRNRT RCRAR A
Sbjct: 288 SRPR*RACRNRTARCRARRA 347
>gb|CW500380.1|CW500380 fsbb001f295k23k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f295k23, DNA
sequence
Length = 503
Score = 110 bits (235), Expect(4) = 7e-045
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +2 / -1
Query: 14 ELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCFLTH 193
++ GL ++GK F WV+R++E+ KL KERGL+V + PQLEV+AH A GCF+TH
Sbjct: 473 QMAEGLYNTGKAFPWVVRASESSKLPENFTDMAKERGLVVTWSPQLEVVAHPAVGCFVTH 294
Query: 194 CGWNSTIESIASGVP 238
CGWNST+E + +GVP
Sbjct: 293 CGWNSTMEGLGAGVP 249
Score = 68.9 bits (144), Expect(4) = 6e-025
Identities = 33/74 (44%), Positives = 42/74 (56%)
Frame = -2 / +3
Query: 235 NTTSDGFNRRVPPAVRQEATCGLVCQHLELRTEGDNEAPFLAPATELSRQFFCLVGPQHP 56
+T + +RRVPPAVR EA V HL+LR +EAP L E+ RQ L GP P
Sbjct: 252 HTGAQSLHRRVPPAVRHEAPDSRVSHHLKLRAPCHDEAPLLGHVGEVFRQL*ALRGPDDP 431
Query: 55 NERLAGIAQSVAEL 14
E LAG+ Q++ L
Sbjct: 432 WEGLAGVVQTLCHL 473
Score = 57.4 bits (119), Expect(4) = 7e-045
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2 / -2
Query: 233 VPMVAMPQWADQPTTAKYVESAWGIGVRMR 322
VPMVAMPQW+DQ AKY+E W +GVR+R
Sbjct: 247 VPMVAMPQWSDQSMNAKYIEDVWRVGVRVR 158
Score = 44.6 bits (91), Expect(4) = 6e-025
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -3 / +3
Query: 321 RMRTPIPHALSTYLAVVGWSAHWGIATIGT 232
R RTP H S YLA + WS H GIATIGT
Sbjct: 159 RTRTPTRHTSSMYLAFMLWSDHCGIATIGT 248
Score = 43.7 bits (89), Expect(4) = 7e-045
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = +2 / -3
Query: 395 YGRNAARWMHKAKEAMQEGGSSDK 466
Y RNAA W KAK AM EGGSSDK
Sbjct: 72 YIRNAAGWKEKAKRAMSEGGSSDK 1
Score = 32.7 bits (65), Expect(4) = 6e-025
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = -3 / +2
Query: 465 LSELPPSCMASLALCIQRAAF 403
LSELPPS MA LA Q AAF
Sbjct: 2 LSELPPSLMALLAFSFQPAAF 64
Score = 26.3 bits (51), Expect(4) = 7e-045
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2 / -2
Query: 326 GSLVRKEVERCIREVMGGER 385
G + +KE+E+ +REV+ GER
Sbjct: 145 GVVRKKELEKRVREVVEGER 86
Score = 23.5 bits (45), Expect(4) = 6e-025
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -3 / +3
Query: 384 LSPPITSLMHLSTSFLTKEPFRMR 313
LSP TSL S+SF P R
Sbjct: 87 LSPSTTSLTRFSSSFFLTTPSSSR 158
>gb|CW472599.1|CW472599 fsbb001f227j19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f227j19, DNA
sequence
Length = 436
Score = 166 bits (358), Expect(2) = 6e-044
Identities = 60/106 (56%), Positives = 79/106 (74%)
Frame = +2 / +3
Query: 5 QLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCF 184
Q+ E+ GL SGKPF+WV+R++E K+ + + ERGL+ + QLEVLAH A GCF
Sbjct: 48 QMAEVAEGLYSSGKPFLWVVRASETSKIPDKFADKANERGLVATWSAQLEVLAHPAVGCF 227
Query: 185 LTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMR 322
+THCGWNST E +++GVPMVAMPQW+DQP AKY+E W +GVR+R
Sbjct: 228 VTHCGWNSTTEGLSAGVPMVAMPQWSDQPVNAKYIEDVWRVGVRVR 365
Score = 96.8 bits (205), Expect(2) = 3e-021
Identities = 46/106 (43%), Positives = 56/106 (52%)
Frame = -2 / -3
Query: 322 PHAHPNPPRALHIFGRRRLVRPLGHRHHWNTTSDGFNRRVPPAVRQEATCGLVCQHLELR 143
PH H + P L + G L+RPL HRHH + + RRVPPA+R EA G V HL+LR
Sbjct: 365 PHPHAHSPHILDVLGVHGLIRPLRHRHHGHAGAQSLRRRVPPAMRHEAPNGRVR*HLQLR 186
Query: 142 TEGDNEAPFLAPATELSRQFFCLVGPQHPNERLAGIAQSVAELVQL 5
NEA + EL R L P P ERLAG Q++ L L
Sbjct: 185 APRRNEASLVRLVGELVRDLGRLRRPNDPQERLAGAVQALRHLGHL 48
Score = 31.8 bits (63), Expect(2) = 6e-044
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2 / +3
Query: 320 RKGSLVRKEVERCIREVMGGE 382
+ G + ++EVERC+REVM G+
Sbjct: 372 KDGVVRKEEVERCVREVMDGQ 434
Score = 25.8 bits (50), Expect(2) = 3e-021
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3 / -1
Query: 384 LSPPITSLMHLSTSFLTKEP 325
L P ITSL HLSTS P
Sbjct: 436 LWPSITSLTHLSTSSFLTTP 377
>gb|CW313572.1|CW313572 104_803_11471355_116_35786_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471355, DNA
sequence
Length = 692
Score = 133 bits (285), Expect(2) = 8e-043
Identities = 46/68 (67%), Positives = 58/68 (85%)
Frame = +2 / -1
Query: 119 RGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESA 298
RGL+V +CPQLEVLAH A GCF THCGWNST+E++++GVPMVAMP W+DQ T AKY++
Sbjct: 617 RGLLVSWCPQLEVLAHPAVGCFFTHCGWNSTVEALSAGVPMVAMPDWSDQTTNAKYIQDV 438
Query: 299 WGIGVRMR 322
W +GVR+R
Sbjct: 437 WRVGVRVR 414
Score = 86.3 bits (182), Expect(2) = 9e-026
Identities = 43/92 (46%), Positives = 49/92 (53%)
Frame = -3 / +1
Query: 321 RMRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*G 142
R RTP H YLA V WS GIAT+GTP S VEF PQCV+KQP A CA TSS G
Sbjct: 415 RTRTPTRHTSWMYLAFVVWSDQSGIATMGTPALSASTVEFQPQCVKKQPTAGCARTSSCG 594
Query: 141 QKGTMRPLSLHLPPSCRDSFSASLDLSTQTKG 46
T PL L S + S + ++ G
Sbjct: 595 HHDTRSPLLASLALSAKPLGSLPVSVARTPTG 690
Score = 61.6 bits (128), Expect(2) = 8e-043
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +2 / -1
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEF 481
+G + +EVERC+R+VM GE + A W KA++AM EGGSSD IA+F
Sbjct: 404 RGVVRSEEVERCVRDVMEGEMGKEFRNRALDWSGKARKAMSEGGSSDVAIADF 246
Score = 51.5 bits (106), Expect(2) = 9e-026
Identities = 27/51 (52%), Positives = 31/51 (60%)
Frame = -3 / +1
Query: 477 SAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFLTKEP 325
SAM SELPPS MA LAL +Q A + +SP +TS HLSTS L P
Sbjct: 250 SAMATSELPPSLMAFLALPLQSKALFLNSLPISPSMTSRTHLSTSSLLTTP 402
>gb|CW239896.1|CW239896 104_698_11217909_116_37504_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11217909, DNA
sequence
Length = 692
Score = 131 bits (280), Expect(2) = 4e-042
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = +2 / -1
Query: 119 RGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESA 298
RGL+V +CPQLE LAH A GCF THCGWNST+E++++GVPMVAMP W+DQ T AKY++
Sbjct: 650 RGLLVSWCPQLEFLAHPAVGCFFTHCGWNSTVEALSAGVPMVAMPDWSDQTTNAKYIQDV 471
Query: 299 WGIGVRMR 322
W +GVR+R
Sbjct: 470 WRVGVRVR 447
Score = 85.4 bits (180), Expect(2) = 2e-025
Identities = 42/81 (51%), Positives = 45/81 (55%)
Frame = -3 / +1
Query: 321 RMRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*G 142
R RTP H YLA V WS GIAT+GTP S VEF PQCV+KQP A CA SS G
Sbjct: 448 RTRTPTRHTSWMYLAFVVWSDQSGIATMGTPALSASTVEFQPQCVKKQPTAGCARNSSCG 627
Query: 141 QKGTMRPLSLHLPPSCRDSFS 79
T PL L S + S S
Sbjct: 628 HHDTRSPLLASLALSAKPSGS 690
Score = 61.6 bits (128), Expect(2) = 4e-042
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +2 / -1
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEF 481
+G + +EVERC+R+VM GE + A W KA++AM EGGSSD IA+F
Sbjct: 437 RGVVRSEEVERCVRDVMEGEMGKEFRNRALDWSGKARKAMSEGGSSDVAIADF 279
Score = 51.5 bits (106), Expect(2) = 2e-025
Identities = 27/51 (52%), Positives = 31/51 (60%)
Frame = -3 / +1
Query: 477 SAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFLTKEP 325
SAM SELPPS MA LAL +Q A + +SP +TS HLSTS L P
Sbjct: 283 SAMATSELPPSLMAFLALPLQSKALFLNSLPISPSMTSRTHLSTSSLLTTP 435
>gb|BI643608.1|BI643608 DG1_91_A08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 484
Score = 127 bits (272), Expect(2) = 5e-042
Identities = 55/68 (80%), Positives = 60/68 (88%)
Frame = +2 / -2
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYLPK 502
KG + R+EVERCIREVM GERK + +NAARWM KAKEAMQEGGSSDKNIAEFAAKYLPK
Sbjct: 366 KGLVRREEVERCIREVMEGERKDEFRQNAARWMKKAKEAMQEGGSSDKNIAEFAAKYLPK 187
Query: 503 *ISDYVLL 526
*ISDY +L
Sbjct: 186 *ISDYYVL 163
Score = 104 bits (222), Expect(2) = 1e-030
Identities = 48/65 (73%), Positives = 51/65 (78%)
Frame = -3 / +2
Query: 516 *SEIYFGKYLAANSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFL 337
*SEIYFGKY AANSAMFLSELPPSC+ASLA I AAF + FLSP ITS MHLSTS L
Sbjct: 173 *SEIYFGKYFAANSAMFLSELPPSCIASLAFFIHLAAFCLNSSFLSPSITSRMHLSTSSL 352
Query: 336 TKEPF 322
+PF
Sbjct: 353 LTKPF 367
Score = 64.8 bits (135), Expect(2) = 5e-042
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +2 / -2
Query: 215 ESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMR 322
E+I +GVPMV +P+ ADQPT AKYVESAW IG+RM+
Sbjct: 483 EAIVAGVPMVGLPRSADQPTAAKYVESAWRIGLRMQ 376
Score = 49.6 bits (102), Expect(2) = 1e-030
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = -3 / +2
Query: 318 MRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDS 214
+R PI HALSTY A VGWSA G T+GTP + S
Sbjct: 380 IRRPILHALSTYFAAVGWSADRGKPTMGTPATIAS 484
>gb|CB928778.1|CB928778 ABA1_24_C06.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_24_C06_A012 3', mRNA sequence
Length = 513
Score = 92.7 bits (196), Expect(2) = 8e-040
Identities = 39/63 (61%), Positives = 44/63 (69%)
Frame = +2 / +3
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYLPK 502
KG + R EV RCI++VM G+RK Y NA WM KAKEAMQ GGSSDKN+ EF AKY
Sbjct: 141 KGLVTRDEVGRCIKDVMDGDRKDNYRMNATMWMQKAKEAMQNGGSSDKNVCEFVAKYSSN 320
Query: 503 *IS 511
* S
Sbjct: 321 *FS 329
Score = 92.3 bits (195), Expect(2) = 8e-040
Identities = 31/44 (70%), Positives = 40/44 (90%)
Frame = +2 / +3
Query: 194 CGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMRK 325
CGWNST+E++ +GVPMVA+P WADQPT +KY+ES WG+GVR+RK
Sbjct: 3 CGWNSTLEAVVNGVPMVAIPHWADQPTISKYMESIWGLGVRVRK 134
Score = 85.4 bits (180), Expect(2) = 1e-031
Identities = 38/60 (63%), Positives = 41/60 (68%)
Frame = -3 / -3
Query: 501 FGKYLAANSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFLTKEPF 322
F +Y A NS FLSELPP CMASLA CI AF+ FLSP ITSLMHL TS L +PF
Sbjct: 319 FDEYFATNSQTFLSELPPFCMASLAFCIHIVAFIL*LSFLSPSITSLMHLPTSSLVTKPF 140
Score = 72.1 bits (151), Expect(2) = 1e-031
Identities = 30/43 (69%), Positives = 31/43 (72%)
Frame = -3 / -3
Query: 321 RMRTPIPHALSTYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQ 193
R RTP PH LS Y +VGWSA GIATIGTPL S VEFHPQ
Sbjct: 130 RTRTPNPHMLSIYFDMVGWSAQCGIATIGTPLTTASSVEFHPQ 2
>gb|CW208733.1|CW208733 104_638_11188843_148_36982_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11188843, DNA
sequence
Length = 663
Score = 133 bits (285), Expect(3) = 2e-039
Identities = 46/68 (67%), Positives = 58/68 (85%)
Frame = +2 / -1
Query: 119 RGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESA 298
RGL+V +CPQLEVLAH A GCF THCGWNST+E++++GVPMVAMP W+DQ T AKY++
Sbjct: 261 RGLLVSWCPQLEVLAHPAVGCFFTHCGWNSTVEALSAGVPMVAMPDWSDQTTNAKYIQDV 82
Query: 299 WGIGVRMR 322
W +GVR+R
Sbjct: 81 WRVGVRVR 58
Score = 44.1 bits (90), Expect(3) = 2e-039
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2 / -1
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKE 118
+Q+ E+ GL SGKPF+WV+R+ E KL + +E
Sbjct: 384 DQMGEIAEGLYGSGKPFLWVVRATETGKLPEGFADKARE 268
Score = 24.0 bits (46), Expect(3) = 2e-039
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 323 KGSLVRKEVERCIREV 370
+G + +EVERC+R+V
Sbjct: 48 RGVVRSEEVERCVRDV 1
>gb|CW239897.1|CW239897 104_698_11217909_148_37505_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11217909, DNA
sequence
Length = 565
Score = 133 bits (285), Expect(2) = 1e-037
Identities = 46/68 (67%), Positives = 58/68 (85%)
Frame = +2 / +2
Query: 119 RGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESA 298
RGL+V +CPQLEVLAH A GCF THCGWNST+E++++GVPMVAMP W+DQ T AKY++
Sbjct: 338 RGLLVSWCPQLEVLAHPAVGCFFTHCGWNSTVEALSAGVPMVAMPDWSDQTTNAKYIQDV 517
Query: 299 WGIGVRMR 322
W +GVR+R
Sbjct: 518 WRVGVRVR 541
Score = 44.1 bits (90), Expect(2) = 1e-037
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2 / +2
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKE 118
+Q+ E+ GL SGKPF+WV+R+ E KL + +E
Sbjct: 215 DQMGEIAEGLYGSGKPFLWVVRATETGKLPEGFADKARE 331
>gb|CL187366.1|CL187366 104_402_10900827_116_32436_002 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10900827, DNA
sequence
Length = 722
Score = 107 bits (229), Expect(3) = 2e-035
Identities = 39/69 (56%), Positives = 52/69 (75%)
Frame = +2 / -2
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
KERG++ +CPQ VL+H + G FLTHCGWNST+ESI +GVPM+ P +A+QPT +YV
Sbjct: 505 KERGILASWCPQELVLSHPSVGLFLTHCGWNSTLESICAGVPMLCWPFFAEQPTNCRYVC 326
Query: 293 SAWGIGVRM 319
WGIG+ +
Sbjct: 325 DKWGIGMEI 299
Score = 50.1 bits (103), Expect(3) = 2e-035
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +2 / -2
Query: 338 RKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNI 472
R+EV R +RE M GER + W KA++A+ EGGSS KN+
Sbjct: 283 RQEVARLVREAMDGERGKAMRLKSMVWKEKARQAVDEGGSSRKNM 149
Score = 29.9 bits (59), Expect(3) = 2e-035
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2 / -2
Query: 5 QLDELGNGLCDSGKPFVWVLR 67
QL E GL G PF+WV+R
Sbjct: 625 QLAEFAWGLASCGSPFLWVIR 563
>gb|CW232538.1|CW232538 104_685_11212872_148_37363_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11212872, DNA
sequence
Length = 572
Score = 125 bits (267), Expect(2) = 6e-035
Identities = 47/70 (67%), Positives = 55/70 (78%)
Frame = +2 / +2
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
+ERGLIV + QLEVLAH A GCF+THCGWNST+E + GVPMVAMPQW+DQ AKY+E
Sbjct: 326 EERGLIVAWSSQLEVLAHPAVGCFVTHCGWNSTMEGLGIGVPMVAMPQWSDQLINAKYIE 505
Query: 293 SAWGIGVRMR 322
W +GVR R
Sbjct: 506 DVWRVGVRAR 535
Score = 43.2 bits (88), Expect(2) = 6e-035
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2 / +2
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKE 118
+QL E+ GL +SGK F+WV+R +E KL + KE
Sbjct: 206 DQLAEMAQGLYNSGKAFLWVVRGSETSKLPESFISKMKE 322
>gb|CW404738.1|CW404738 fsbb001f097a06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f097a06, DNA
sequence
Length = 603
Score = 148 bits (317), Expect = 8e-035
Identities = 54/94 (57%), Positives = 70/94 (74%)
Frame = +2 / +2
Query: 5 QLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCF 184
Q+ E+ GL SGKPF+WV+R++E K+ + + ERGL+ + QLEVLAH A GCF
Sbjct: 320 QMAEVAEGLYSSGKPFLWVVRASETSKIPDKFADKANERGLVATWSAQLEVLAHPAVGCF 499
Query: 185 LTHCGWNSTIESIASGVPMVAMPQWADQPTTAKY 286
+THCGWNST E +++GVPMVAMPQW+DQP AKY
Sbjct: 500 VTHCGWNSTTEGLSAGVPMVAMPQWSDQPVNAKY 601
>gb|CL189680.1|CL189680 104_407_10905541_116_32481_061 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10905541, DNA
sequence
Length = 677
Score = 110 bits (235), Expect(2) = 9e-035
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +2 / -1
Query: 14 ELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCFLTH 193
++ GL ++GK F WV+R++E+ KL KERGL+V + PQLEV+AH A GCF+TH
Sbjct: 329 QMAEGLYNTGKAFPWVVRASESSKLPENFTDMAKERGLVVTWSPQLEVVAHPAVGCFVTH 150
Query: 194 CGWNSTIESIASGVP 238
CGWNST+E + +GVP
Sbjct: 149 CGWNSTMEGLGAGVP 105
Score = 57.4 bits (119), Expect(2) = 9e-035
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2 / -2
Query: 233 VPMVAMPQWADQPTTAKYVESAWGIGVRMR 322
VPMVAMPQW+DQ AKY+E W +GVR+R
Sbjct: 103 VPMVAMPQWSDQSMNAKYIEDVWRVGVRVR 14
>gb|CW408694.1|CW408694 fsbb001f102l04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f102l04, DNA
sequence
Length = 655
Score = 106 bits (227), Expect(3) = 2e-034
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = +2 / +3
Query: 110 CKERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYV 289
C +RG +V +CPQ VL H A GCF+THCGWNS E++A+GVPMVA P W+DQ T AK +
Sbjct: 114 CGDRGRVVAWCPQGRVLGHGAVGCFVTHCGWNSVAEALAAGVPMVAYPWWSDQFTNAKLL 293
Query: 290 ESAWGIGVRM 319
+ +GVR+
Sbjct: 294 VEEYRVGVRL 323
Score = 48.7 bits (100), Expect(3) = 2e-034
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +2 / +3
Query: 356 CIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEF 481
C+ EVMGG R + A W +A +A+ +GGSSD+N+ F
Sbjct: 357 CVDEVMGGPRAAAFRMRALAWKDEAADAVADGGSSDRNLLAF 482
Score = 29.0 bits (57), Expect(3) = 2e-034
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2 / +3
Query: 17 LGNGLCDSGKPFVWVLRSNEAEKL 88
+ GL +G+PF+WV+R + L
Sbjct: 18 VAEGLASTGRPFLWVVRDDSRRLL 89
>gb|CW312128.1|CW312128 104_801_11470592_148_36283_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470592, DNA
sequence
Length = 678
Score = 121 bits (258), Expect(3) = 3e-034
Identities = 43/67 (64%), Positives = 54/67 (80%)
Frame = +2 / -1
Query: 125 LIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWG 304
++VP+CPQL+VLAH A GCF+THCGWNST+E+++ GVPMVAM W DQPT A+ VE AW
Sbjct: 657 MVVPWCPQLDVLAHPAVGCFVTHCGWNSTLEALSYGVPMVAMALWTDQPTNARNVELAWR 478
Query: 305 IGVRMRK 325
G R R+
Sbjct: 477 AGARARR 457
Score = 35.9 bits (72), Expect(3) = 3e-034
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2 / -1
Query: 377 GERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEF 481
GE + W KA+ A+ GGSSD+N+ EF
Sbjct: 378 GEEASAVRKAVGTWRDKARAAVAAGGSSDRNLDEF 274
Score = 27.2 bits (53), Expect(3) = 3e-034
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / -1
Query: 326 GSLVRKEVERCIREVM 373
G +R EVERC+R VM
Sbjct: 432 GMFLRGEVERCVRAVM 385
>gb|CW269433.1|CW269433 104_740_11401840_148_35315_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401840, DNA
sequence
Length = 617
Score = 121 bits (258), Expect(3) = 3e-034
Identities = 43/67 (64%), Positives = 54/67 (80%)
Frame = +2 / +1
Query: 125 LIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWG 304
++VP+CPQL+VLAH A GCF+THCGWNST+E+++ GVPMVAM W DQPT A+ VE AW
Sbjct: 346 MVVPWCPQLDVLAHPAVGCFVTHCGWNSTLEALSYGVPMVAMALWTDQPTNARNVELAWR 525
Query: 305 IGVRMRK 325
G R R+
Sbjct: 526 AGARARR 546
Score = 38.2 bits (77), Expect(3) = 3e-034
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2 / +1
Query: 5 QLDELGNGLCDSGKPFVWVLRSNEAEKLSRQL 100
Q +EL GL +GKPF+WV+R+ + ++ L
Sbjct: 220 QTEELARGLLAAGKPFLWVVRATDEHQIPHHL 315
Score = 24.9 bits (48), Expect(3) = 3e-034
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2 / +1
Query: 326 GSLVRKEVERCIREV 370
G +R EVERC+R V
Sbjct: 571 GMFLRGEVERCVRAV 615
>gb|CW072473.1|CW072473 104_325_10592285_116_30541 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592285, DNA
sequence
Length = 697
Score = 120 bits (256), Expect(3) = 6e-034
Identities = 43/66 (65%), Positives = 53/66 (80%)
Frame = +2 / -1
Query: 128 IVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGI 307
+VP+CPQL+VLAH A GCF+THCGWNST+E+++ GVPMVAM W DQPT A+ VE AW
Sbjct: 691 VVPWCPQLDVLAHPAVGCFVTHCGWNSTLEALSYGVPMVAMALWTDQPTNARNVELAWRA 512
Query: 308 GVRMRK 325
G R R+
Sbjct: 511 GARARR 494
Score = 35.9 bits (72), Expect(3) = 6e-034
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2 / -1
Query: 377 GERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEF 481
GE + W KA+ A+ GGSSD+N+ EF
Sbjct: 415 GEEASAVRKAVGTWRDKARAAVAAGGSSDRNLDEF 311
Score = 27.2 bits (53), Expect(3) = 6e-034
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / -1
Query: 326 GSLVRKEVERCIREVM 373
G +R EVERC+R VM
Sbjct: 469 GMFLRGEVERCVRAVM 422
>gb|AW923519.1|AW923519 DG1_52_C12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 531
Score = 145 bits (311), Expect = 6e-034
Identities = 59/121 (48%), Positives = 77/121 (63%)
Frame = +2 / +3
Query: 119 RGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESA 298
RG +VP+ PQ VLAH +T CFLTHCGWNST+E+IA+GVP+VA PQW DQ T AK++
Sbjct: 3 RGTVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVEE 182
Query: 299 WGIGVRMRKGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAE 478
+GVR+R L R V + + G +A RW A+EA+ GGSSDK++
Sbjct: 183 LRMGVRLRGSPLRRDAVREAVEAAVAGAEADAMLASARRWSAAAREAVAPGGSSDKHVQA 362
Query: 479 F 481
F
Sbjct: 363 F 365
>gb|BE364586.2|BE364586 PI1_15_G08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 584
Score = 145 bits (311), Expect = 6e-034
Identities = 59/121 (48%), Positives = 77/121 (63%)
Frame = +2 / +2
Query: 119 RGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESA 298
RG +VP+ PQ VLAH +T CFLTHCGWNST+E+IA+GVP+VA PQW DQ T AK++
Sbjct: 20 RGTVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVEE 199
Query: 299 WGIGVRMRKGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAE 478
+GVR+R L R V + + G +A RW A+EA+ GGSSDK++
Sbjct: 200 LRMGVRLRGSPLRRDAVREAVEAAVAGAEADAMLASARRWSAAAREAVAPGGSSDKHVQA 379
Query: 479 F 481
F
Sbjct: 380 F 382
>gb|CW449893.1|CW449893 fsbb001f188e03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f188e03, DNA
sequence
Length = 689
Score = 117 bits (250), Expect(2) = 1e-033
Identities = 41/68 (60%), Positives = 53/68 (77%)
Frame = +2 / -2
Query: 122 GLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAW 301
G +V +C Q VL+H A GCFLTHCGWNS +E++ASGVP+V P WADQPT AK++E +
Sbjct: 637 GKVVAWCDQARVLSHAAVGCFLTHCGWNSAVEALASGVPVVTYPAWADQPTNAKFLEDVY 458
Query: 302 GIGVRMRK 325
G+GVR+ K
Sbjct: 457 GVGVRLPK 434
Score = 46.4 bits (95), Expect(2) = 1e-033
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2 / -2
Query: 332 LVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEF 481
+ R + RC+ EVM G + A +W +A A+ GGSS++ I +F
Sbjct: 430 IARDALRRCVEEVMSGPKAAAMRATAGKWKDEASAALATGGSSERGIQDF 281
>gb|CW412589.1|CW412589 fsbb001f108e18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f108e18, DNA
sequence
Length = 632
Score = 96.8 bits (205), Expect(3) = 3e-033
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = +2 / +2
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMP 253
+ERGLIV +CPQLEVLAH A GCF+THCGWNST+E + GVPMVAMP
Sbjct: 434 EERGLIVAWCPQLEVLAHPAVGCFVTHCGWNSTMEGLRIGVPMVAMP 574
Score = 43.2 bits (88), Expect(3) = 3e-033
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2 / +2
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKE 118
+QL E+ GL +SGK F+WV+R E KL + + KE
Sbjct: 314 DQLAEMAQGLYNSGKAFLWVVRGPETSKLPKSFVSKVKE 430
Score = 40.9 bits (83), Expect(3) = 3e-033
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 251 PQWADQPTTAKYVESAWGIG 310
PQW+DQP AKY+E W +G
Sbjct: 573 PQWSDQPMNAKYIEDVWRVG 632
>gb|CW313573.1|CW313573 104_803_11471355_148_35790_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471355, DNA
sequence
Length = 650
Score = 118 bits (253), Expect(2) = 3e-033
Identities = 40/61 (65%), Positives = 51/61 (83%)
Frame = +2 / +1
Query: 119 RGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESA 298
RGL+V +CPQLEVLAH A GCF THCGWNST+E++++GVPMVAMP W+DQ T +Y++
Sbjct: 463 RGLLVSWCPQLEVLAHPAVGCFFTHCGWNSTVEALSAGVPMVAMPDWSDQTTKRQYIQDV 642
Query: 299 W 301
W
Sbjct: 643 W 645
Score = 44.1 bits (90), Expect(2) = 3e-033
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2 / +1
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKE 118
+Q+ E+ GL SGKPF+WV+R+ E KL + +E
Sbjct: 340 DQMGEIAEGLYGSGKPFLWVVRATETGKLPEGFADKARE 456
>gb|CW273802.1|CW273802 104_746_11404095_116_35362_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404095, DNA
sequence
Length = 724
Score = 106 bits (227), Expect(3) = 2e-032
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = +2 / -1
Query: 110 CKERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYV 289
C +RG +V +CPQ VL H A GCF+THCGWNS E++A+GVPMVA P W+DQ T AK +
Sbjct: 634 CGDRGRVVAWCPQGRVLGHGAVGCFVTHCGWNSVAEALAAGVPMVAYPWWSDQFTNAKLL 455
Query: 290 ESAWGIGVRM 319
+ +GVR+
Sbjct: 454 VEEYRVGVRL 425
Score = 48.7 bits (100), Expect(3) = 2e-032
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +2 / -1
Query: 356 CIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEF 481
C+ EVMGG R + A W +A +A+ +GGSSD+N+ F
Sbjct: 391 CVDEVMGGPRAAAFRMRALAWKDEAADAVADGGSSDRNLLAF 266
Score = 22.1 bits (42), Expect(3) = 2e-032
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2 / -2
Query: 26 GLCDSGKPFVW 58
GL +G PF+W
Sbjct: 720 GLASTGSPFLW 688
>gb|CW312127.1|CW312127 104_801_11470592_116_36284_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470592, DNA
sequence
Length = 643
Score = 121 bits (258), Expect(2) = 3e-032
Identities = 43/67 (64%), Positives = 54/67 (80%)
Frame = +2 / +2
Query: 125 LIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWG 304
++VP+CPQL+VLAH A GCF+THCGWNST+E+++ GVPMVAM W DQPT A+ VE AW
Sbjct: 416 MVVPWCPQLDVLAHPAVGCFVTHCGWNSTLEALSYGVPMVAMALWTDQPTNARNVELAWR 595
Query: 305 IGVRMRK 325
G R R+
Sbjct: 596 AGARARR 616
Score = 38.2 bits (77), Expect(2) = 3e-032
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2 / +2
Query: 5 QLDELGNGLCDSGKPFVWVLRSNEAEKLSRQL 100
Q +EL GL +GKPF+WV+R+ + ++ L
Sbjct: 290 QTEELARGLLAAGKPFLWVVRATDEHQIPHHL 385
>gb|BE126076.1|BE126076 DG1_65_E03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 680
Score = 115 bits (245), Expect(3) = 1e-030
Identities = 40/71 (56%), Positives = 52/71 (73%)
Frame = +2 / +1
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
K G++V +C Q VLAH + GCF+THCGWNST+E++ SGVPMVA+P W+DQP A VE
Sbjct: 154 KAAGMVVEWCDQQRVLAHPSVGCFVTHCGWNSTLEAVVSGVPMVAVPSWSDQPVNAWLVE 333
Query: 293 SAWGIGVRMRK 325
W +GVR +
Sbjct: 334 EGWQVGVRAER 366
Score = 29.5 bits (58), Expect(3) = 1e-030
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2 / +1
Query: 5 QLDELGNGLCDSGKPFVWVLR 67
Q +E+ +GL SG+P++WV+R
Sbjct: 31 QAEEVLHGLQASGRPYLWVVR 93
Score = 27.2 bits (53), Expect(3) = 1e-030
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2 / +1
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGR 403
+G+L R E+ RC+ VMG K V R
Sbjct: 373 EGTLTRGELARCVELVMGAGDKAVQVR 453
>gb|BE362888.2|BE362888 DG1_90_B11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 682
Score = 115 bits (245), Expect(3) = 1e-030
Identities = 40/71 (56%), Positives = 52/71 (73%)
Frame = +2 / +3
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
K G++V +C Q VLAH + GCF+THCGWNST+E++ SGVPMVA+P W+DQP A VE
Sbjct: 258 KAAGMVVEWCDQQRVLAHPSVGCFVTHCGWNSTLEAVVSGVPMVAVPSWSDQPVNAWLVE 437
Query: 293 SAWGIGVRMRK 325
W +GVR +
Sbjct: 438 EGWQVGVRAER 470
Score = 29.5 bits (58), Expect(3) = 1e-030
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2 / +3
Query: 5 QLDELGNGLCDSGKPFVWVLR 67
Q +E+ +GL SG+P++WV+R
Sbjct: 135 QAEEVLHGLQASGRPYLWVVR 197
Score = 27.2 bits (53), Expect(3) = 1e-030
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2 / +3
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGR 403
+G+L R E+ RC+ VMG K V R
Sbjct: 477 EGTLTRGELARCVELVMGAGDKAVQVR 557
>gb|CX616980.1|CX616980 GABR1_31_B05.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_31_B05_A002 3', mRNA sequence
Length = 636
Score = 115 bits (245), Expect(3) = 1e-030
Identities = 40/71 (56%), Positives = 52/71 (73%)
Frame = +2 / +1
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
K G++V +C Q VLAH + GCF+THCGWNST+E++ SGVPMVA+P W+DQP A VE
Sbjct: 214 KAAGMVVEWCDQQRVLAHPSVGCFVTHCGWNSTLEAVVSGVPMVAVPSWSDQPVNAWLVE 393
Query: 293 SAWGIGVRMRK 325
W +GVR +
Sbjct: 394 EGWQVGVRAER 426
Score = 29.5 bits (58), Expect(3) = 1e-030
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2 / +1
Query: 5 QLDELGNGLCDSGKPFVWVLR 67
Q +E+ +GL SG+P++WV+R
Sbjct: 91 QAEEVLHGLQASGRPYLWVVR 153
Score = 27.2 bits (53), Expect(3) = 1e-030
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2 / +1
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGR 403
+G+L R E+ RC+ VMG K V R
Sbjct: 433 EGTLTRGELARCVELVMGAGDKAVQVR 513
>gb|CN130398.1|CN130398 RHOH1_41_F02.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_41_F02_A002 3', mRNA sequence
Length = 712
Score = 132 bits (282), Expect = 6e-030
Identities = 50/107 (46%), Positives = 72/107 (67%)
Frame = +2 / +3
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGC 181
E + E+ +GL +G+PF+WV+R + L RG++VP+ PQ VLAH +T C
Sbjct: 57 EVIAEMAHGLASTGRPFLWVVRPDTRPLLPEGFLDAVAGRGMVVPWSPQDRVLAHASTAC 236
Query: 182 FLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMR 322
FLTHCGWNST+E++A+GVP++A PQW DQ T AK++ +GV +R
Sbjct: 237 FLTHCGWNSTLETVAAGVPVLAFPQWGDQCTDAKFLVDELRMGVHLR 377
>gb|CN141229.1|CN141229 OX1_50_D06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_50_D06_A002 3', mRNA sequence
Length = 758
Score = 132 bits (282), Expect = 6e-030
Identities = 50/107 (46%), Positives = 72/107 (67%)
Frame = +2 / +3
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGC 181
E + E+ +GL +G+PF+WV+R + L RG++VP+ PQ VLAH +T C
Sbjct: 117 EVIAEMAHGLASTGRPFLWVVRPDTRPLLPEGFLDAVAGRGMVVPWSPQDRVLAHASTAC 296
Query: 182 FLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMR 322
FLTHCGWNST+E++A+GVP++A PQW DQ T AK++ +GV +R
Sbjct: 297 FLTHCGWNSTLETVAAGVPVLAFPQWGDQCTDAKFLVDELRMGVHLR 437
>gb|BG241163.1|BG241163 OV1_39_A04.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 409
Score = 131 bits (281), Expect = 8e-030
Identities = 50/96 (52%), Positives = 68/96 (70%)
Frame = +2 / +2
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGC 181
E++ E+ +GL +G+PF+WV+R + E L RG +VP+ PQ VLAH +T C
Sbjct: 104 EEVGEMAHGLAATGRPFLWVVRPDTREHLPEGFLDAVAGRGTVVPWSPQDRVLAHPSTAC 283
Query: 182 FLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYV 289
FLTHCGWNST+E+IA+GVP+VA PQW DQ T AK++
Sbjct: 284 FLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFL 391
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 784,533,082
Number of Sequences: 832831
Number of extensions: 12329045
Number of successful extensions: 180950
Number of sequences better than 1.0e-020: 143
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 16750511820
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)