TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2907809.2.1
(614 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF430120.1|CF430120 PH1_26_A07.b1_A002 Phosphorous-defic... 195 5e-059
gb|CF430172.1|CF430172 PH1_26_A07.g1_A002 Phosphorous-defic... 195 5e-059
gb|CF434229.1|CF434229 NIT1_29_D08.b1_A002 Nitrogen-deficie... 193 1e-058
gb|CF071310.1|CF071310 FE1_16_C11.g1_A002 Iron-deficient se... 195 4e-056
gb|CX606228.1|CX606228 ANR1_1_G09.g1_A002 Anaerobic roots S... 195 4e-056
gb|AW924069.1|AW924069 WS1_49_H11.b1_A002 Water-stressed 1 ... 195 4e-056
gb|CD462310.1|CD462310 SA1_40_G07.g1_A002 Salicylic acid-tr... 195 4e-056
gb|CX613695.1|CX613695 GABR1_9_E01.g1_A002 GA- or brassinol... 195 4e-056
gb|CD462226.1|CD462226 SA1_40_G07.b1_A002 Salicylic acid-tr... 195 4e-056
gb|CF434333.1|CF434333 NIT1_29_D08.g1_A002 Nitrogen-deficie... 184 6e-056
gb|CF071260.1|CF071260 FE1_16_C11.b1_A002 Iron-deficient se... 195 1e-055
gb|CX606135.1|CX606135 ANR1_1_G09.b1_A002 Anaerobic roots S... 195 3e-055
gb|CF073841.1|CF073841 FE1_12_H01.g1_A002 Iron-deficient se... 188 4e-055
gb|CN144192.1|CN144192 WOUND1_20_F01.g1_A002 Wounded leaves... 192 4e-054
gb|CF073870.1|CF073870 FE1_12_B02.g1_A002 Iron-deficient se... 182 2e-053
gb|AW746392.1|AW746392 WS1_49_H11.g1_A002 Water-stressed 1 ... 188 4e-053
gb|CF071649.1|CF071649 FE1_17_D07.g1_A002 Iron-deficient se... 182 4e-052
gb|AW923345.1|AW923345 DG1_51_G07.b1_A002 Dark Grown 1 (DG1... 195 4e-049
gb|AI724411.1|AI724411 RHIZ1_36_D03.y2_A001 Rhizome1 (RHIZ1... 179 4e-048
gb|AW746636.1|AW746636 WS1_54_B04.b1_A002 Water-stressed 1 ... 161 8e-046
gb|BE358653.1|BE358653 DG1_30_F11.g1_A002 Dark Grown 1 (DG1... 153 2e-043
gb|AW671475.1|AW671475 LG1_347_C08.b1_A002 Light Grown 1 (L... 172 3e-042
gb|AW925081.1|AW925081 WS1_75_B10.b1_A002 Water-stressed 1 ... 172 3e-042
gb|BE593786.1|BE593786 WS1_102_B10.g1_A002 Water-stressed 1... 172 3e-042
gb|BE594099.1|BE594099 WS1_102_B10.b1_A002 Water-stressed 1... 172 3e-042
gb|BE598329.1|BE598329 PI1_81_G08.g1_A002 Pathogen induced ... 172 3e-042
gb|BE598670.1|BE598670 PI1_81_G08.b1_A002 Pathogen induced ... 172 3e-042
gb|BE917631.1|BE917631 OV1_6_B05.g1_A002 Ovary 1 (OV1) Sorg... 172 3e-042
gb|BE917708.1|BE917708 OV1_6_B05.b1_A002 Ovary 1 (OV1) Sorg... 172 3e-042
gb|BF657366.1|BF657366 OV2_24_B07.g1_A002 Ovary 2 (OV2) Sor... 172 3e-042
gb|BF657438.1|BF657438 OV2_24_B07.b1_A002 Ovary 2 (OV2) Sor... 172 3e-042
gb|BG050425.1|BG050425 FM1_69_A05.g1_A003 Floral-Induced Me... 172 3e-042
gb|BG933158.1|BG933158 WS1_29_H08.b1_A002 Water-stressed 1 ... 172 3e-042
gb|BI351376.1|BI351376 IP1_70_G08.b1_A002 Immature pannicle... 172 3e-042
gb|BI643767.1|BI643767 IP1_56_G11.b1_A002 Immature pannicle... 172 3e-042
gb|CD221158.1|CD221158 CCC1_74_G04.b1_A007 Callus culture/c... 172 3e-042
gb|CD221265.1|CD221265 CCC1_74_G04.g1_A007 Callus culture/c... 172 3e-042
gb|CD430389.1|CD430389 ETH1_18_D03.g1_A002 Ethylene-treated... 172 3e-042
gb|BG050559.1|BG050559 FM1_69_A05.b1_A003 Floral-Induced Me... 170 2e-041
gb|AW747681.1|AW747681 WS1_75_B10.g1_A002 Water-stressed 1 ... 169 3e-041
gb|BG050487.1|BG050487 FM1_70_A04.g1_A003 Floral-Induced Me... 159 4e-038
gb|CW408142.1|CW408142 fsbb001f101o13f0 Sorghum methylation... 113 5e-035
gb|BG050745.1|BG050745 FM1_70_A04.b1_A003 Floral-Induced Me... 143 3e-033
gb|CW308818.1|CW308818 104_797_11468871_148_35725_058 Sorgh... 113 1e-031
gb|BI351172.1|BI351172 IP1_70_G08.g1_A002 Immature pannicle... 137 2e-031
gb|CW092300.1|CW092300 104_454_10999068_116_33041_036 Sorgh... 113 2e-024
gb|AW923420.1|AW923420 DG1_51_G07.g1_A002 Dark Grown 1 (DG1... 77 6e-023
>gb|CF430120.1|CF430120 PH1_26_A07.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_26_A07_A002 3', mRNA sequence
Length = 675
Score = 195 bits (421), Expect(3) = 5e-059
Identities = 79/84 (94%), Positives = 81/84 (96%)
Frame = +1 / -1
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
++AMGGGN QKSKMARERNAEKNKG KGSQLE NKKAMNIQCKICMQTFICTTSEAKCKE
Sbjct: 561 ASAMGGGNGQKSKMARERNAEKNKGSKGSQLETNKKAMNIQCKICMQTFICTTSEAKCKE 382
Query: 295 HAEARHPKNDLYQCFPHLKN**AA 366
HAEARHPKNDLYQCFPHLKN**AA
Sbjct: 381 HAEARHPKNDLYQCFPHLKN**AA 310
Score = 101 bits (215), Expect(4) = 1e-038
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -1 / +2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSLHLASEVVQ+KVC+QILHWMFM
Sbjct: 332 WGKHW*RSFLGCLASACSLHLASEVVQIKVCIQILHWMFM 451
Score = 51.9 bits (107), Expect(4) = 1e-038
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = -2 / +3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPW 122
WPSC PA CL SWTSGRCRRPW
Sbjct: 450 WPSCLSPADCLWSPCSSRRSSPAPSWTSGRCRRPW 554
Score = 43.7 bits (89), Expect(3) = 5e-059
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / -2
Query: 414 YIRCVSINGFXXXXXXXXSFVLPRLIMYCNPWLSACCAKN 533
+I CV+ + S VLP L M CNP LSACCAKN
Sbjct: 209 HILCVNGSQLLLLLLQLLSVVLPHLNM*CNPSLSACCAKN 90
Score = 41.8 bits (85), Expect(4) = 1e-038
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / +1
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI R GNT E
Sbjct: 91 FLAQQADSEGLHYIFRWGNTTE 156
Score = 28.6 bits (56), Expect(3) = 5e-059
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2 / -2
Query: 530 KPLVLCGFMLPACA 571
+ L+LCGF++P CA
Sbjct: 71 RTLILCGFVMPVCA 30
Score = 23.5 bits (45), Expect(4) = 1e-038
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1 / +2
Query: 575 AQHRQAA*IHTEPM 534
++HRQA+ IHTE M
Sbjct: 26 SKHRQASQIHTELM 67
>gb|CF430172.1|CF430172 PH1_26_A07.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_26_A07_A002 5', mRNA sequence
Length = 652
Score = 195 bits (421), Expect(3) = 5e-059
Identities = 79/84 (94%), Positives = 81/84 (96%)
Frame = +1 / -1
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
++AMGGGN QKSKMARERNAEKNKG KGSQLE NKKAMNIQCKICMQTFICTTSEAKCKE
Sbjct: 565 ASAMGGGNGQKSKMARERNAEKNKGSKGSQLETNKKAMNIQCKICMQTFICTTSEAKCKE 386
Query: 295 HAEARHPKNDLYQCFPHLKN**AA 366
HAEARHPKNDLYQCFPHLKN**AA
Sbjct: 385 HAEARHPKNDLYQCFPHLKN**AA 314
Score = 101 bits (215), Expect(4) = 1e-038
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -1 / +3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSLHLASEVVQ+KVC+QILHWMFM
Sbjct: 336 WGKHW*RSFLGCLASACSLHLASEVVQIKVCIQILHWMFM 455
Score = 51.9 bits (107), Expect(4) = 1e-038
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = -2 / +1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPW 122
WPSC PA CL SWTSGRCRRPW
Sbjct: 454 WPSCLSPADCLWSPCSSRRSSPAPSWTSGRCRRPW 558
Score = 43.7 bits (89), Expect(3) = 5e-059
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / -2
Query: 414 YIRCVSINGFXXXXXXXXSFVLPRLIMYCNPWLSACCAKN 533
+I CV+ + S VLP L M CNP LSACCAKN
Sbjct: 213 HILCVNGSQLLLLLLQLLSVVLPHLNM*CNPSLSACCAKN 94
Score = 41.8 bits (85), Expect(4) = 1e-038
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / +2
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI R GNT E
Sbjct: 95 FLAQQADSEGLHYIFRWGNTTE 160
Score = 28.6 bits (56), Expect(3) = 5e-059
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2 / -3
Query: 530 KPLVLCGFMLPACA 571
+ L+LCGF++P CA
Sbjct: 74 RTLILCGFVMPVCA 33
Score = 23.5 bits (45), Expect(4) = 1e-038
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1 / +2
Query: 575 AQHRQAA*IHTEPM 534
++HRQA+ IHTE M
Sbjct: 29 SKHRQASQIHTELM 70
>gb|CF434229.1|CF434229 NIT1_29_D08.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_29_D08_A002 3', mRNA sequence
Length = 676
Score = 193 bits (416), Expect(3) = 1e-058
Identities = 78/84 (92%), Positives = 80/84 (95%)
Frame = +1 / -1
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
++AMGGGN QKSKMARERNAEKNKG KGSQLE NKKAMNIQCKICMQTFICTTSEA CKE
Sbjct: 562 ASAMGGGNGQKSKMARERNAEKNKGSKGSQLETNKKAMNIQCKICMQTFICTTSEANCKE 383
Query: 295 HAEARHPKNDLYQCFPHLKN**AA 366
HAEARHPKNDLYQCFPHLKN**AA
Sbjct: 382 HAEARHPKNDLYQCFPHLKN**AA 311
Score = 97.7 bits (207), Expect(4) = 1e-037
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = -1 / +3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSL LASEVVQ+KVC+QILHWMFM
Sbjct: 333 WGKHW*RSFLGCLASACSLQLASEVVQIKVCIQILHWMFM 452
Score = 51.9 bits (107), Expect(4) = 1e-037
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = -2 / +1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPW 122
WPSC PA CL SWTSGRCRRPW
Sbjct: 451 WPSCLSPADCLWSPCSSRRSSPAPSWTSGRCRRPW 555
Score = 43.7 bits (89), Expect(3) = 1e-058
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / -2
Query: 414 YIRCVSINGFXXXXXXXXSFVLPRLIMYCNPWLSACCAKN 533
+I CV+ + S VLP L M CNP LSACCAKN
Sbjct: 210 HILCVNGSQLLLLLLQLLSVVLPHLNM*CNPSLSACCAKN 91
Score = 41.8 bits (85), Expect(4) = 1e-037
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / +2
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI R GNT E
Sbjct: 92 FLAQQADSEGLHYIFRWGNTTE 157
Score = 29.5 bits (58), Expect(3) = 1e-058
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1 / -2
Query: 529 KTIGSVWIHAACLCCACSIFS 591
K I SVWI ACLC FS
Sbjct: 72 KNINSVWICDACLCLLSIFFS 10
Score = 23.5 bits (45), Expect(4) = 1e-037
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1 / +2
Query: 575 AQHRQAA*IHTEPM 534
++HRQA+ IHTE M
Sbjct: 26 SKHRQASQIHTELM 67
>gb|CF071310.1|CF071310 FE1_16_C11.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_16_C11_A002 5', mRNA sequence
Length = 623
Score = 195 bits (421), Expect(2) = 4e-056
Identities = 79/84 (94%), Positives = 81/84 (96%)
Frame = +1 / -2
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
++AMGGGN QKSKMARERNAEKNKG KGSQLE NKKAMNIQCKICMQTFICTTSEAKCKE
Sbjct: 532 ASAMGGGNGQKSKMARERNAEKNKGSKGSQLETNKKAMNIQCKICMQTFICTTSEAKCKE 353
Query: 295 HAEARHPKNDLYQCFPHLKN**AA 366
HAEARHPKNDLYQCFPHLKN**AA
Sbjct: 352 HAEARHPKNDLYQCFPHLKN**AA 281
Score = 101 bits (215), Expect(3) = 7e-037
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -1 / +3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSLHLASEVVQ+KVC+QILHWMFM
Sbjct: 303 WGKHW*RSFLGCLASACSLHLASEVVQIKVCIQILHWMFM 422
Score = 51.9 bits (107), Expect(3) = 7e-037
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = -2 / +1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPW 122
WPSC PA CL SWTSGRCRRPW
Sbjct: 421 WPSCLSPADCLWSPCSSRRSSPAPSWTSGRCRRPW 525
Score = 43.7 bits (89), Expect(2) = 4e-056
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / -3
Query: 414 YIRCVSINGFXXXXXXXXSFVLPRLIMYCNPWLSACCAKN 533
+I CV+ + S VLP L M CNP LSACCAKN
Sbjct: 180 HILCVNGSQLLLLLLQLLSVVLPHLNM*CNPSLSACCAKN 61
Score = 41.8 bits (85), Expect(3) = 7e-037
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / +2
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI R GNT E
Sbjct: 62 FLAQQADSEGLHYIFRWGNTTE 127
>gb|CX606228.1|CX606228 ANR1_1_G09.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_G09_A002 5', mRNA sequence
Length = 608
Score = 195 bits (421), Expect(2) = 4e-056
Identities = 79/84 (94%), Positives = 81/84 (96%)
Frame = +1 / +3
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
++AMGGGN QKSKMARERNAEKNKG KGSQLE NKKAMNIQCKICMQTFICTTSEAKCKE
Sbjct: 69 ASAMGGGNGQKSKMARERNAEKNKGSKGSQLETNKKAMNIQCKICMQTFICTTSEAKCKE 248
Query: 295 HAEARHPKNDLYQCFPHLKN**AA 366
HAEARHPKNDLYQCFPHLKN**AA
Sbjct: 249 HAEARHPKNDLYQCFPHLKN**AA 320
Score = 101 bits (215), Expect(3) = 6e-037
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -1 / -2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSLHLASEVVQ+KVC+QILHWMFM
Sbjct: 298 WGKHW*RSFLGCLASACSLHLASEVVQIKVCIQILHWMFM 179
Score = 51.9 bits (107), Expect(3) = 6e-037
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = -2 / -3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPW 122
WPSC PA CL SWTSGRCRRPW
Sbjct: 180 WPSCLSPADCLWSPCSSRRSSPAPSWTSGRCRRPW 76
Score = 43.7 bits (89), Expect(2) = 4e-056
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / +1
Query: 414 YIRCVSINGFXXXXXXXXSFVLPRLIMYCNPWLSACCAKN 533
+I CV+ + S VLP L M CNP LSACCAKN
Sbjct: 421 HILCVNGSQLLLLLLQLLSVVLPHLNM*CNPSLSACCAKN 540
Score = 41.8 bits (85), Expect(3) = 6e-037
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / -1
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI R GNT E
Sbjct: 539 FLAQQADSEGLHYIFRWGNTTE 474
>gb|AW924069.1|AW924069 WS1_49_H11.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 590
Score = 195 bits (421), Expect(2) = 4e-056
Identities = 79/84 (94%), Positives = 81/84 (96%)
Frame = +1 / +2
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
++AMGGGN QKSKMARERNAEKNKG KGSQLE NKKAMNIQCKICMQTFICTTSEAKCKE
Sbjct: 71 ASAMGGGNGQKSKMARERNAEKNKGSKGSQLETNKKAMNIQCKICMQTFICTTSEAKCKE 250
Query: 295 HAEARHPKNDLYQCFPHLKN**AA 366
HAEARHPKNDLYQCFPHLKN**AA
Sbjct: 251 HAEARHPKNDLYQCFPHLKN**AA 322
Score = 101 bits (215), Expect(3) = 6e-037
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSLHLASEVVQ+KVC+QILHWMFM
Sbjct: 300 WGKHW*RSFLGCLASACSLHLASEVVQIKVCIQILHWMFM 181
Score = 51.9 bits (107), Expect(3) = 6e-037
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPW 122
WPSC PA CL SWTSGRCRRPW
Sbjct: 182 WPSCLSPADCLWSPCSSRRSSPAPSWTSGRCRRPW 78
Score = 43.7 bits (89), Expect(2) = 4e-056
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / +3
Query: 414 YIRCVSINGFXXXXXXXXSFVLPRLIMYCNPWLSACCAKN 533
+I CV+ + S VLP L M CNP LSACCAKN
Sbjct: 423 HILCVNGSQLLLLLLQLLSVVLPHLNM*CNPSLSACCAKN 542
Score = 41.8 bits (85), Expect(3) = 6e-037
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / -2
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI R GNT E
Sbjct: 541 FLAQQADSEGLHYIFRWGNTTE 476
>gb|CD462310.1|CD462310 SA1_40_G07.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_40_G07_A002 5', mRNA sequence
Length = 545
Score = 195 bits (421), Expect(2) = 4e-056
Identities = 79/84 (94%), Positives = 81/84 (96%)
Frame = +1 / +2
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
++AMGGGN QKSKMARERNAEKNKG KGSQLE NKKAMNIQCKICMQTFICTTSEAKCKE
Sbjct: 14 ASAMGGGNGQKSKMARERNAEKNKGSKGSQLETNKKAMNIQCKICMQTFICTTSEAKCKE 193
Query: 295 HAEARHPKNDLYQCFPHLKN**AA 366
HAEARHPKNDLYQCFPHLKN**AA
Sbjct: 194 HAEARHPKNDLYQCFPHLKN**AA 265
Score = 101 bits (215), Expect(3) = 5e-037
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSLHLASEVVQ+KVC+QILHWMFM
Sbjct: 243 WGKHW*RSFLGCLASACSLHLASEVVQIKVCIQILHWMFM 124
Score = 51.9 bits (107), Expect(3) = 5e-037
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPW 122
WPSC PA CL SWTSGRCRRPW
Sbjct: 125 WPSCLSPADCLWSPCSSRRSSPAPSWTSGRCRRPW 21
Score = 43.7 bits (89), Expect(2) = 4e-056
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / +3
Query: 414 YIRCVSINGFXXXXXXXXSFVLPRLIMYCNPWLSACCAKN 533
+I CV+ + S VLP L M CNP LSACCAKN
Sbjct: 366 HILCVNGSQLLLLLLQLLSVVLPHLNM*CNPSLSACCAKN 485
Score = 41.8 bits (85), Expect(3) = 5e-037
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / -2
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI R GNT E
Sbjct: 484 FLAQQADSEGLHYIFRWGNTTE 419
>gb|CX613695.1|CX613695 GABR1_9_E01.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_9_E01_A002 5', mRNA sequence
Length = 543
Score = 195 bits (421), Expect(2) = 4e-056
Identities = 79/84 (94%), Positives = 81/84 (96%)
Frame = +1 / +1
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
++AMGGGN QKSKMARERNAEKNKG KGSQLE NKKAMNIQCKICMQTFICTTSEAKCKE
Sbjct: 16 ASAMGGGNGQKSKMARERNAEKNKGSKGSQLETNKKAMNIQCKICMQTFICTTSEAKCKE 195
Query: 295 HAEARHPKNDLYQCFPHLKN**AA 366
HAEARHPKNDLYQCFPHLKN**AA
Sbjct: 196 HAEARHPKNDLYQCFPHLKN**AA 267
Score = 101 bits (215), Expect(3) = 5e-037
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -1 / -2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSLHLASEVVQ+KVC+QILHWMFM
Sbjct: 245 WGKHW*RSFLGCLASACSLHLASEVVQIKVCIQILHWMFM 126
Score = 51.9 bits (107), Expect(3) = 5e-037
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = -2 / -3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPW 122
WPSC PA CL SWTSGRCRRPW
Sbjct: 127 WPSCLSPADCLWSPCSSRRSSPAPSWTSGRCRRPW 23
Score = 43.7 bits (89), Expect(2) = 4e-056
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / +2
Query: 414 YIRCVSINGFXXXXXXXXSFVLPRLIMYCNPWLSACCAKN 533
+I CV+ + S VLP L M CNP LSACCAKN
Sbjct: 368 HILCVNGSQLLLLLLQLLSVVLPHLNM*CNPSLSACCAKN 487
Score = 41.8 bits (85), Expect(3) = 5e-037
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / -1
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI R GNT E
Sbjct: 486 FLAQQADSEGLHYIFRWGNTTE 421
>gb|CD462226.1|CD462226 SA1_40_G07.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_40_G07_A002 3', mRNA sequence
Length = 529
Score = 195 bits (421), Expect(2) = 4e-056
Identities = 79/84 (94%), Positives = 81/84 (96%)
Frame = +1 / +1
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
++AMGGGN QKSKMARERNAEKNKG KGSQLE NKKAMNIQCKICMQTFICTTSEAKCKE
Sbjct: 25 ASAMGGGNGQKSKMARERNAEKNKGSKGSQLETNKKAMNIQCKICMQTFICTTSEAKCKE 204
Query: 295 HAEARHPKNDLYQCFPHLKN**AA 366
HAEARHPKNDLYQCFPHLKN**AA
Sbjct: 205 HAEARHPKNDLYQCFPHLKN**AA 276
Score = 101 bits (215), Expect(3) = 5e-037
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSLHLASEVVQ+KVC+QILHWMFM
Sbjct: 254 WGKHW*RSFLGCLASACSLHLASEVVQIKVCIQILHWMFM 135
Score = 51.9 bits (107), Expect(3) = 5e-037
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPW 122
WPSC PA CL SWTSGRCRRPW
Sbjct: 136 WPSCLSPADCLWSPCSSRRSSPAPSWTSGRCRRPW 32
Score = 43.7 bits (89), Expect(2) = 4e-056
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / +2
Query: 414 YIRCVSINGFXXXXXXXXSFVLPRLIMYCNPWLSACCAKN 533
+I CV+ + S VLP L M CNP LSACCAKN
Sbjct: 377 HILCVNGSQLLLLLLQLLSVVLPHLNM*CNPSLSACCAKN 496
Score = 41.8 bits (85), Expect(3) = 5e-037
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / -2
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI R GNT E
Sbjct: 495 FLAQQADSEGLHYIFRWGNTTE 430
>gb|CF434333.1|CF434333 NIT1_29_D08.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_29_D08_A002 5', mRNA sequence
Length = 662
Score = 184 bits (396), Expect(3) = 6e-056
Identities = 72/78 (92%), Positives = 74/78 (94%)
Frame = +1 / -1
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+AMGGGN QKSKMARERNAEKNKG KGSQLE NKKAMN QCKICMQTFICTTSEAKCKEH
Sbjct: 614 SAMGGGNGQKSKMARERNAEKNKGSKGSQLETNKKAMNFQCKICMQTFICTTSEAKCKEH 435
Query: 298 AEARHPKNDLYQCFPHLK 351
AEARHPKNDLYQCFPHL+
Sbjct: 434 AEARHPKNDLYQCFPHLQ 381
Score = 98.7 bits (209), Expect(4) = 9e-038
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = -1 / +1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSLHLASEVVQ+KVC+QILHW FM
Sbjct: 388 WGKHW*RSFLGCLASACSLHLASEVVQIKVCIQILHWKFM 507
Score = 51.5 bits (106), Expect(4) = 9e-038
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = -2 / +2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPW 122
WPSC PA CL SWTSGRCRRPW
Sbjct: 506 WPSCLSPADCLWSPCFSRRSSPAPSWTSGRCRRPW 610
Score = 43.7 bits (89), Expect(3) = 6e-056
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / -3
Query: 414 YIRCVSINGFXXXXXXXXSFVLPRLIMYCNPWLSACCAKN 533
+I CV+ + S VLP L M CNP LSACCAKN
Sbjct: 264 HILCVNGSQLLLLLLQLLSVVLPHLNM*CNPSLSACCAKN 145
Score = 41.8 bits (85), Expect(4) = 9e-038
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / +2
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI R GNT E
Sbjct: 146 FLAQQADSEGLHYIFRWGNTTE 211
Score = 29.5 bits (58), Expect(3) = 6e-056
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1 / -3
Query: 529 KTIGSVWIHAACLCCACSIFS 591
K I SVWI ACLC FS
Sbjct: 126 KNINSVWICDACLCLLSIFFS 64
Score = 23.5 bits (45), Expect(4) = 9e-038
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1 / +2
Query: 575 AQHRQAA*IHTEPM 534
++HRQA+ IHTE M
Sbjct: 80 SKHRQASQIHTELM 121
>gb|CF071260.1|CF071260 FE1_16_C11.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_16_C11_A002 3', mRNA sequence
Length = 666
Score = 195 bits (421), Expect(2) = 1e-055
Identities = 79/84 (94%), Positives = 81/84 (96%)
Frame = +1 / -3
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
++AMGGGN QKSKMARERNAEKNKG KGSQLE NKKAMNIQCKICMQTFICTTSEAKCKE
Sbjct: 574 ASAMGGGNGQKSKMARERNAEKNKGSKGSQLETNKKAMNIQCKICMQTFICTTSEAKCKE 395
Query: 295 HAEARHPKNDLYQCFPHLKN**AA 366
HAEARHPKNDLYQCFPHLKN**AA
Sbjct: 394 HAEARHPKNDLYQCFPHLKN**AA 323
Score = 101 bits (215), Expect(3) = 3e-036
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -1 / +3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSLHLASEVVQ+KVC+QILHWMFM
Sbjct: 345 WGKHW*RSFLGCLASACSLHLASEVVQIKVCIQILHWMFM 464
Score = 51.9 bits (107), Expect(3) = 3e-036
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = -2 / +1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPW 122
WPSC PA CL SWTSGRCRRPW
Sbjct: 463 WPSCLSPADCLWSPCSSRRSSPAPSWTSGRCRRPW 567
Score = 44.1 bits (90), Expect(2) = 1e-055
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1 / -2
Query: 475 CCPV*LCTVTLGCQPAVLKTIGSVWIHAACLC 570
CCP+*+C V L CQP VLKT+ + LC
Sbjct: 161 CCPI*ICNVILRCQPVVLKTLILCGLRTLILC 66
Score = 40.0 bits (81), Expect(3) = 3e-036
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -2 / +2
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI R GNT +
Sbjct: 104 FLAQQADSEGLHYIFRWGNTTK 169
>gb|CX606135.1|CX606135 ANR1_1_G09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_G09_A002 3', mRNA sequence
Length = 578
Score = 195 bits (421), Expect(2) = 3e-055
Identities = 79/84 (94%), Positives = 81/84 (96%)
Frame = +1 / +2
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
++AMGGGN QKSKMARERNAEKNKG KGSQLE NKKAMNIQCKICMQTFICTTSEAKCKE
Sbjct: 77 ASAMGGGNGQKSKMARERNAEKNKGSKGSQLETNKKAMNIQCKICMQTFICTTSEAKCKE 256
Query: 295 HAEARHPKNDLYQCFPHLKN**AA 366
HAEARHPKNDLYQCFPHLKN**AA
Sbjct: 257 HAEARHPKNDLYQCFPHLKN**AA 328
Score = 101 bits (215), Expect(3) = 6e-037
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSLHLASEVVQ+KVC+QILHWMFM
Sbjct: 306 WGKHW*RSFLGCLASACSLHLASEVVQIKVCIQILHWMFM 187
Score = 51.9 bits (107), Expect(3) = 6e-037
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPW 122
WPSC PA CL SWTSGRCRRPW
Sbjct: 188 WPSCLSPADCLWSPCSSRRSSPAPSWTSGRCRRPW 84
Score = 42.3 bits (86), Expect(2) = 3e-055
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1 / +1
Query: 475 CCPV*LCTVTLGCQPAVLKTI 537
CCP+*+C V L CQP VLKT+
Sbjct: 490 CCPI*ICNVILRCQPVVLKTL 552
Score = 41.8 bits (85), Expect(3) = 6e-037
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / -2
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI R GNT E
Sbjct: 547 FLAQQADSEGLHYIFRWGNTTE 482
>gb|CF073841.1|CF073841 FE1_12_H01.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_12_H01_A002 5', mRNA sequence
Length = 619
Score = 188 bits (405), Expect(3) = 4e-055
Identities = 76/80 (95%), Positives = 77/80 (96%)
Frame = +1 / -3
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GGG +QKSKMARERNAEKNKG KGSQLE NKKAMNIQCKICMQTFICTTSEAKCKEHAEA
Sbjct: 536 GGGGSQKSKMARERNAEKNKGSKGSQLETNKKAMNIQCKICMQTFICTTSEAKCKEHAEA 357
Query: 307 RHPKNDLYQCFPHLKN**AA 366
RHPKNDLYQCFPHLKN**AA
Sbjct: 356 RHPKNDLYQCFPHLKN**AA 297
Score = 101 bits (215), Expect(3) = 8e-031
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -1 / +1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSLHLASEVVQ+KVC+QILHWMFM
Sbjct: 319 WGKHW*RSFLGCLASACSLHLASEVVQIKVCIQILHWMFM 438
Score = 43.7 bits (89), Expect(3) = 4e-055
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / -1
Query: 414 YIRCVSINGFXXXXXXXXSFVLPRLIMYCNPWLSACCAKN 533
+I CV+ + S VLP L M CNP LSACCAKN
Sbjct: 196 HILCVNGSQLLLLLLQLLSVVLPHLNM*CNPSLSACCAKN 77
Score = 41.8 bits (85), Expect(3) = 8e-031
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / +3
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI R GNT E
Sbjct: 78 FLAQQADSEGLHYIFRWGNTTE 143
Score = 31.3 bits (62), Expect(3) = 8e-031
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -2 / +2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRR 128
WPSC PA CL SWTS RR
Sbjct: 437 WPSCLSPADCLWSPCSSRRSSPAPSWTSDCRRR 535
Score = 22.6 bits (43), Expect(3) = 4e-055
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = +2 / -2
Query: 530 KPLVLCGFMLP 562
+ L+LCGF++P
Sbjct: 57 RTLILCGFVMP 25
>gb|CN144192.1|CN144192 WOUND1_20_F01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_20_F01_A002 5', mRNA sequence
Length = 579
Score = 192 bits (413), Expect(2) = 4e-054
Identities = 78/84 (92%), Positives = 80/84 (95%)
Frame = +1 / +3
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
++AMGGG QKSKMARERNAEKNKG KGSQLE NKKAMNIQCKICMQTFICTTSEAKCKE
Sbjct: 69 ASAMGGGYGQKSKMARERNAEKNKGSKGSQLETNKKAMNIQCKICMQTFICTTSEAKCKE 248
Query: 295 HAEARHPKNDLYQCFPHLKN**AA 366
HAEARHPKNDLYQCFPHLKN**AA
Sbjct: 249 HAEARHPKNDLYQCFPHLKN**AA 320
Score = 101 bits (215), Expect(3) = 9e-036
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSLHLASEVVQ+KVC+QILHWMFM
Sbjct: 298 WGKHW*RSFLGCLASACSLHLASEVVQIKVCIQILHWMFM 179
Score = 47.3 bits (97), Expect(3) = 9e-036
Identities = 18/35 (51%), Positives = 18/35 (51%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPW 122
WPSC PA CL SWTSGR RRPW
Sbjct: 180 WPSCLSPADCLWSPCSSRRSSPAPSWTSGRSRRPW 76
Score = 42.3 bits (86), Expect(3) = 9e-036
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -2 / -2
Query: 535 WFLAQQADSQGLQYIIRRGNTNE 467
+FLAQQADS+GL YI R GNT E
Sbjct: 542 FFLAQQADSEGLHYIFRWGNTTE 474
Score = 40.9 bits (83), Expect(2) = 4e-054
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +3 / +1
Query: 414 YIRCVSINGFXXXXXXXXSFVLPRLIMYCNPWLSACCAK 530
+I CV+ + S VLP L M CNP LSACCAK
Sbjct: 421 HILCVNGSQLLLLLLQLLSVVLPHLNM*CNPSLSACCAK 537
>gb|CF073870.1|CF073870 FE1_12_B02.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_12_B02_A002 5', mRNA sequence
Length = 527
Score = 182 bits (393), Expect(3) = 2e-053
Identities = 74/78 (94%), Positives = 75/78 (96%)
Frame = +1 / -1
Query: 133 GNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARH 312
G +QKSKMARERNAEKNKG KGSQLE NKKAMNIQCKICMQTFICTTSEAKCKEHAEARH
Sbjct: 527 GGSQKSKMARERNAEKNKGSKGSQLETNKKAMNIQCKICMQTFICTTSEAKCKEHAEARH 348
Query: 313 PKNDLYQCFPHLKN**AA 366
PKNDLYQCFPHLKN**AA
Sbjct: 347 PKNDLYQCFPHLKN**AA 294
Score = 101 bits (215), Expect(3) = 1e-030
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -1 / +1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSLHLASEVVQ+KVC+QILHWMFM
Sbjct: 316 WGKHW*RSFLGCLASACSLHLASEVVQIKVCIQILHWMFM 435
Score = 43.7 bits (89), Expect(3) = 2e-053
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / -2
Query: 414 YIRCVSINGFXXXXXXXXSFVLPRLIMYCNPWLSACCAKN 533
+I CV+ + S VLP L M CNP LSACCAKN
Sbjct: 193 HILCVNGSQLLLLLLQLLSVVLPHLNM*CNPSLSACCAKN 74
Score = 41.8 bits (85), Expect(3) = 1e-030
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / +3
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI R GNT E
Sbjct: 75 FLAQQADSEGLHYIFRWGNTTE 140
Score = 29.9 bits (59), Expect(3) = 1e-030
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2 / +2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTS 143
WPSC PA CL SWTS
Sbjct: 434 WPSCLSPADCLWSPCSSRRSSPAPSWTS 517
Score = 22.6 bits (43), Expect(3) = 2e-053
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = +2 / -3
Query: 530 KPLVLCGFMLP 562
+ L+LCGF++P
Sbjct: 54 RTLILCGFVMP 22
>gb|AW746392.1|AW746392 WS1_49_H11.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 516
Score = 188 bits (405), Expect(2) = 4e-053
Identities = 77/84 (91%), Positives = 79/84 (94%)
Frame = +1 / +3
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
++AMGGGN QKSKMARERNAEKNKG KGSQLE NKKAMNIQCKICMQTFICTT EAKCKE
Sbjct: 30 ASAMGGGNGQKSKMARERNAEKNKGSKGSQLETNKKAMNIQCKICMQTFICTTFEAKCKE 209
Query: 295 HAEARHPKNDLYQCFPHLKN**AA 366
HAEARHPKNDLYQCFP LKN**AA
Sbjct: 210 HAEARHPKNDLYQCFPPLKN**AA 281
Score = 94.5 bits (200), Expect(3) = 2e-034
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = -1 / -3
Query: 341 GKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
GKHW*RSFLGCLASACSLHLAS+VVQ+KVC+QILHWMFM
Sbjct: 256 GKHW*RSFLGCLASACSLHLASKVVQIKVCIQILHWMFM 140
Score = 51.5 bits (106), Expect(3) = 2e-034
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPW 122
WPSC PA CL SWTSGRCRRPW
Sbjct: 141 WPSCLSPADCLWNPCSSRRSSPAPSWTSGRCRRPW 37
Score = 42.3 bits (86), Expect(2) = 4e-053
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1 / +2
Query: 475 CCPV*LCTVTLGCQPAVLKTI 537
CCP+*+C V L CQP VLKT+
Sbjct: 443 CCPI*ICNVILRCQPVVLKTL 505
Score = 40.5 bits (82), Expect(3) = 2e-034
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -2 / -2
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI + GNT E
Sbjct: 500 FLAQQADSEGLHYIFKWGNTTE 435
>gb|CF071649.1|CF071649 FE1_17_D07.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_17_D07_A002 5', mRNA sequence
Length = 645
Score = 182 bits (392), Expect(2) = 4e-052
Identities = 75/80 (93%), Positives = 75/80 (93%)
Frame = +1 / -2
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GGG QKSKMARERNAEKNKG KGSQLE NKKAMNIQCKICMQTFI TTSEAKCKEHAEA
Sbjct: 527 GGGGGQKSKMARERNAEKNKGSKGSQLETNKKAMNIQCKICMQTFIRTTSEAKCKEHAEA 348
Query: 307 RHPKNDLYQCFPHLKN**AA 366
RHPKNDLYQCFPHLKN**AA
Sbjct: 347 RHPKNDLYQCFPHLKN**AA 288
Score = 99.6 bits (211), Expect(3) = 1e-032
Identities = 37/40 (92%), Positives = 40/40 (100%)
Frame = -1 / +1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSLHLASEVV++KVC+QILHWMFM
Sbjct: 310 WGKHW*RSFLGCLASACSLHLASEVVRIKVCIQILHWMFM 429
Score = 43.7 bits (89), Expect(2) = 4e-052
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / -3
Query: 414 YIRCVSINGFXXXXXXXXSFVLPRLIMYCNPWLSACCAKN 533
+I CV+ + S VLP L M CNP LSACCAKN
Sbjct: 187 HILCVNGSQLLLLLLQLLSVVLPHLNM*CNPSLSACCAKN 68
Score = 41.8 bits (85), Expect(3) = 1e-032
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / +3
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI R GNT E
Sbjct: 69 FLAQQADSEGLHYIFRWGNTTE 134
Score = 39.1 bits (79), Expect(3) = 1e-032
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -2 / +2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSC PA CL SWTSGR RR +P + +
Sbjct: 428 WPSCLSPADCLWSPCSSRRSSPAPSWTSGRRRRRRHASPQLRK 556
>gb|AW923345.1|AW923345 DG1_51_G07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 504
Score = 195 bits (421), Expect = 4e-049
Identities = 79/84 (94%), Positives = 81/84 (96%)
Frame = +1 / +1
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
++AMGGGN QKSKMARERNAEKNKG KGSQLE NKKAMNIQCKICMQTFICTTSEAKCKE
Sbjct: 100 ASAMGGGNGQKSKMARERNAEKNKGSKGSQLETNKKAMNIQCKICMQTFICTTSEAKCKE 279
Query: 295 HAEARHPKNDLYQCFPHLKN**AA 366
HAEARHPKNDLYQCFPHLKN**AA
Sbjct: 280 HAEARHPKNDLYQCFPHLKN**AA 351
Score = 101 bits (215), Expect(2) = 2e-030
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -1 / -2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSLHLASEVVQ+KVC+QILHWMFM
Sbjct: 329 WGKHW*RSFLGCLASACSLHLASEVVQIKVCIQILHWMFM 210
Score = 51.9 bits (107), Expect(2) = 2e-030
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = -2 / -3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPW 122
WPSC PA CL SWTSGRCRRPW
Sbjct: 211 WPSCLSPADCLWSPCSSRRSSPAPSWTSGRCRRPW 107
>gb|AI724411.1|AI724411 RHIZ1_36_D03.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 492
Score = 179 bits (386), Expect(2) = 4e-048
Identities = 73/75 (97%), Positives = 73/75 (97%)
Frame = +1 / +1
Query: 142 QKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKN 321
QKSKMARERNAEKNKG KGSQLE NKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKN
Sbjct: 1 QKSKMARERNAEKNKGSKGSQLETNKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKN 180
Query: 322 DLYQCFPHLKN**AA 366
DLYQCFPHLKN**AA
Sbjct: 181 DLYQCFPHLKN**AA 225
Score = 103 bits (219), Expect(3) = 5e-029
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = -1 / -2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSLHLASEVVQMKVC+QILHWMFM
Sbjct: 203 WGKHW*RSFLGCLASACSLHLASEVVQMKVCIQILHWMFM 84
Score = 35.9 bits (72), Expect(3) = 5e-029
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2 / -3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTS 143
WPSCW PA CL SWTS
Sbjct: 85 WPSCWSPADCLWSPCSSRRSSPAPSWTS 2
Score = 34.1 bits (68), Expect(2) = 4e-048
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1 / +3
Query: 475 CCPV*LCTVTLGCQPAVLKTIGSVW 549
CCP+*+C V L K I SVW
Sbjct: 387 CCPI*ICNVILRSPACCAKNINSVW 461
Score = 28.6 bits (56), Expect(3) = 5e-029
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3 / -2
Query: 555 MNPHRTNGF*HSRLTAKGYST*SDGATRTK 466
++PHR N F + +K Y T DGAT+ K
Sbjct: 467 LSPHRINVFSTTGWRSKDYITYLDGATQPK 378
>gb|AW746636.1|AW746636 WS1_54_B04.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 486
Score = 161 bits (346), Expect(2) = 8e-046
Identities = 65/68 (95%), Positives = 65/68 (95%)
Frame = +1 / +2
Query: 163 ERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFP 342
E NAEKNKG KGSQLE NKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFP
Sbjct: 5 EGNAEKNKGSKGSQLETNKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFP 184
Query: 343 HLKN**AA 366
HLKN**AA
Sbjct: 185 HLKN**AA 208
Score = 101 bits (215), Expect(2) = 5e-027
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSLHLASEVVQ+KVC+QILHWMFM
Sbjct: 186 WGKHW*RSFLGCLASACSLHLASEVVQIKVCIQILHWMFM 67
Score = 43.7 bits (89), Expect(2) = 8e-046
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / +3
Query: 414 YIRCVSINGFXXXXXXXXSFVLPRLIMYCNPWLSACCAKN 533
+I CV+ + S VLP L M CNP LSACCAKN
Sbjct: 309 HILCVNGSQLLLLLLQLLSVVLPHLNM*CNPSLSACCAKN 428
Score = 41.8 bits (85), Expect(2) = 5e-027
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / -3
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI R GNT E
Sbjct: 427 FLAQQADSEGLHYIFRWGNTTE 362
>gb|BE358653.1|BE358653 DG1_30_F11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 687
Score = 153 bits (328), Expect(2) = 2e-043
Identities = 61/63 (96%), Positives = 61/63 (96%)
Frame = +1 / +3
Query: 178 KNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN* 357
KNKG KGSQLE NKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN*
Sbjct: 237 KNKGSKGSQLETNKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN* 416
Query: 358 *AA 366
*AA
Sbjct: 417 *AA 425
Score = 101 bits (215), Expect(2) = 7e-027
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW*RSFLGCLASACSLHLASEVVQ+KVC+QILHWMFM
Sbjct: 403 WGKHW*RSFLGCLASACSLHLASEVVQIKVCIQILHWMFM 284
Score = 43.7 bits (89), Expect(2) = 2e-043
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / +1
Query: 414 YIRCVSINGFXXXXXXXXSFVLPRLIMYCNPWLSACCAKN 533
+I CV+ + S VLP L M CNP LSACCAKN
Sbjct: 526 HILCVNGSQLLLLLLQLLSVVLPHLNM*CNPSLSACCAKN 645
Score = 41.8 bits (85), Expect(2) = 7e-027
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / -2
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI R GNT E
Sbjct: 644 FLAQQADSEGLHYIFRWGNTTE 579
>gb|AW671475.1|AW671475 LG1_347_C08.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 505
Score = 172 bits (371), Expect = 3e-042
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1 / +1
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 58 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 237
Query: 298 AEARHPKNDLYQCFPHLKN**AAE 369
AEA+HPK D+YQCFPHLK * A+E
Sbjct: 238 AEAKHPKTDVYQCFPHLKK*KASE 309
>gb|AW925081.1|AW925081 WS1_75_B10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 516
Score = 172 bits (371), Expect = 3e-042
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1 / +1
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 94 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 273
Query: 298 AEARHPKNDLYQCFPHLKN**AAE 369
AEA+HPK D+YQCFPHLK * A+E
Sbjct: 274 AEAKHPKTDVYQCFPHLKK*KASE 345
>gb|BE593786.1|BE593786 WS1_102_B10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 486
Score = 172 bits (371), Expect = 3e-042
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1 / +1
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 73 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 252
Query: 298 AEARHPKNDLYQCFPHLKN**AAE 369
AEA+HPK D+YQCFPHLK * A+E
Sbjct: 253 AEAKHPKTDVYQCFPHLKK*KASE 324
>gb|BE594099.1|BE594099 WS1_102_B10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 516
Score = 172 bits (371), Expect = 3e-042
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1 / +1
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 73 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 252
Query: 298 AEARHPKNDLYQCFPHLKN**AAE 369
AEA+HPK D+YQCFPHLK * A+E
Sbjct: 253 AEAKHPKTDVYQCFPHLKK*KASE 324
>gb|BE598329.1|BE598329 PI1_81_G08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 597
Score = 172 bits (371), Expect = 3e-042
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1 / +1
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 115 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 294
Query: 298 AEARHPKNDLYQCFPHLKN**AAE 369
AEA+HPK D+YQCFPHLK * A+E
Sbjct: 295 AEAKHPKTDVYQCFPHLKK*KASE 366
>gb|BE598670.1|BE598670 PI1_81_G08.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 485
Score = 172 bits (371), Expect = 3e-042
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1 / +2
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 128 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 307
Query: 298 AEARHPKNDLYQCFPHLKN**AAE 369
AEA+HPK D+YQCFPHLK * A+E
Sbjct: 308 AEAKHPKTDVYQCFPHLKK*KASE 379
>gb|BE917631.1|BE917631 OV1_6_B05.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 624
Score = 172 bits (371), Expect = 3e-042
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1 / +2
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 134 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 313
Query: 298 AEARHPKNDLYQCFPHLKN**AAE 369
AEA+HPK D+YQCFPHLK * A+E
Sbjct: 314 AEAKHPKTDVYQCFPHLKK*KASE 385
>gb|BE917708.1|BE917708 OV1_6_B05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 554
Score = 172 bits (371), Expect = 3e-042
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1 / +2
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 134 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 313
Query: 298 AEARHPKNDLYQCFPHLKN**AAE 369
AEA+HPK D+YQCFPHLK * A+E
Sbjct: 314 AEAKHPKTDVYQCFPHLKK*KASE 385
>gb|BF657366.1|BF657366 OV2_24_B07.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 482
Score = 172 bits (371), Expect = 3e-042
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1 / +3
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 39 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 218
Query: 298 AEARHPKNDLYQCFPHLKN**AAE 369
AEA+HPK D+YQCFPHLK * A+E
Sbjct: 219 AEAKHPKTDVYQCFPHLKK*KASE 290
>gb|BF657438.1|BF657438 OV2_24_B07.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 331
Score = 172 bits (371), Expect = 3e-042
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1 / +3
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 75 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 254
Query: 298 AEARHPKNDLYQCFPHLKN**AAE 369
AEA+HPK D+YQCFPHLK * A+E
Sbjct: 255 AEAKHPKTDVYQCFPHLKK*KASE 326
Score = 73.5 bits (154), Expect(3) = 6e-021
Identities = 27/40 (67%), Positives = 27/40 (67%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW S GCLASACS H S VV M VCM LHWM M
Sbjct: 301 WGKHWYTSVFGCLASACSRHFTSVVVHMNVCMHTLHWMLM 182
Score = 38.6 bits (78), Expect(3) = 6e-021
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -2 / -2
Query: 151 WTSGRCRRPWPLNPA 107
WTSGRCRRPW ++PA
Sbjct: 108 WTSGRCRRPWWMDPA 64
Score = 25.8 bits (50), Expect(3) = 6e-021
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2 / -2
Query: 226 WPSCWPPAG 200
WPSCW AG
Sbjct: 183 WPSCWSQAG 157
>gb|BG050425.1|BG050425 FM1_69_A05.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 470
Score = 172 bits (371), Expect = 3e-042
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1 / +3
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 42 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 221
Query: 298 AEARHPKNDLYQCFPHLKN**AAE 369
AEA+HPK D+YQCFPHLK * A+E
Sbjct: 222 AEAKHPKTDVYQCFPHLKK*KASE 293
>gb|BG933158.1|BG933158 WS1_29_H08.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 526
Score = 172 bits (371), Expect = 3e-042
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1 / +1
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 58 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 237
Query: 298 AEARHPKNDLYQCFPHLKN**AAE 369
AEA+HPK D+YQCFPHLK * A+E
Sbjct: 238 AEAKHPKTDVYQCFPHLKK*KASE 309
>gb|BI351376.1|BI351376 IP1_70_G08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 476
Score = 172 bits (371), Expect = 3e-042
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1 / +2
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 128 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 307
Query: 298 AEARHPKNDLYQCFPHLKN**AAE 369
AEA+HPK D+YQCFPHLK * A+E
Sbjct: 308 AEAKHPKTDVYQCFPHLKK*KASE 379
>gb|BI643767.1|BI643767 IP1_56_G11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 598
Score = 172 bits (371), Expect = 3e-042
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1 / +3
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 129 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 308
Query: 298 AEARHPKNDLYQCFPHLKN**AAE 369
AEA+HPK D+YQCFPHLK * A+E
Sbjct: 309 AEAKHPKTDVYQCFPHLKK*KASE 380
>gb|CD221158.1|CD221158 CCC1_74_G04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_74_G04_A007 3', mRNA sequence
Length = 567
Score = 172 bits (371), Expect = 3e-042
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1 / +2
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 71 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 250
Query: 298 AEARHPKNDLYQCFPHLKN**AAE 369
AEA+HPK D+YQCFPHLK * A+E
Sbjct: 251 AEAKHPKTDVYQCFPHLKK*KASE 322
>gb|CD221265.1|CD221265 CCC1_74_G04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_74_G04_A007 5', mRNA sequence
Length = 643
Score = 172 bits (371), Expect = 3e-042
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1 / +3
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 135 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 314
Query: 298 AEARHPKNDLYQCFPHLKN**AAE 369
AEA+HPK D+YQCFPHLK * A+E
Sbjct: 315 AEAKHPKTDVYQCFPHLKK*KASE 386
>gb|CD430389.1|CD430389 ETH1_18_D03.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_18_D03_A002 5', mRNA sequence
Length = 654
Score = 172 bits (371), Expect = 3e-042
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1 / +1
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 94 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 273
Query: 298 AEARHPKNDLYQCFPHLKN**AAE 369
AEA+HPK D+YQCFPHLK * A+E
Sbjct: 274 AEAKHPKTDVYQCFPHLKK*KASE 345
>gb|BG050559.1|BG050559 FM1_69_A05.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 395
Score = 170 bits (366), Expect = 2e-041
Identities = 65/83 (78%), Positives = 74/83 (89%)
Frame = +1 / +3
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 129 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 308
Query: 298 AEARHPKNDLYQCFPHLKN**AA 366
AEA+HPK D+YQCFPHLK * A+
Sbjct: 309 AEAKHPKTDVYQCFPHLKK*KAS 377
>gb|AW747681.1|AW747681 WS1_75_B10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 482
Score = 169 bits (364), Expect = 3e-041
Identities = 65/84 (77%), Positives = 73/84 (86%)
Frame = +1 / +2
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 5 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 184
Query: 298 AEARHPKNDLYQCFPHLKN**AAE 369
AE +HPK D+YQCFPHLK * A E
Sbjct: 185 AEVKHPKTDVYQCFPHLKK*KAFE 256
>gb|BG050487.1|BG050487 FM1_70_A04.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 420
Score = 159 bits (341), Expect = 4e-038
Identities = 61/76 (80%), Positives = 69/76 (90%)
Frame = +1 / +1
Query: 142 QKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKN 321
QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EHAEA+HPK
Sbjct: 4 QKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKT 183
Query: 322 DLYQCFPHLKN**AAE 369
D+YQCFPHLK * A+E
Sbjct: 184 DVYQCFPHLKK*KASE 231
>gb|CW408142.1|CW408142 fsbb001f101o13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f101o13, DNA
sequence
Length = 766
Score = 113 bits (242), Expect(3) = 5e-035
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +1 / +2
Query: 235 QCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN**AA 366
QCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN**AA
Sbjct: 224 QCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN**AA 355
Score = 89.0 bits (188), Expect(3) = 1e-024
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = -1 / -2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILH 237
WGKHW*RSFLGCLASACSLHLASEVVQ+KVC+QILH
Sbjct: 333 WGKHW*RSFLGCLASACSLHLASEVVQIKVCIQILH 226
Score = 43.7 bits (89), Expect(3) = 5e-035
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / +3
Query: 414 YIRCVSINGFXXXXXXXXSFVLPRLIMYCNPWLSACCAKN 533
+I CV+ + S VLP L M CNP LSACCAKN
Sbjct: 456 HILCVNGSQLLLLLLQLLSVVLPHLNM*CNPSLSACCAKN 575
Score = 41.8 bits (85), Expect(3) = 1e-024
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / -1
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI R GNT E
Sbjct: 574 FLAQQADSEGLHYIFRWGNTTE 509
Score = 29.5 bits (58), Expect(3) = 5e-035
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1 / +3
Query: 529 KTIGSVWIHAACLCCACSIFS 591
K I SVWI ACLC FS
Sbjct: 594 KNINSVWICDACLCLLSIFFS 656
Score = 23.5 bits (45), Expect(3) = 1e-024
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1 / -1
Query: 575 AQHRQAA*IHTEPM 534
++HRQA+ IHTE M
Sbjct: 640 SKHRQASQIHTELM 599
>gb|BG050745.1|BG050745 FM1_70_A04.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 333
Score = 143 bits (306), Expect = 3e-033
Identities = 54/67 (80%), Positives = 61/67 (91%)
Frame = +1 / +3
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
+ MGGGN QKSKMARERN EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EH
Sbjct: 129 STMGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREH 308
Query: 298 AEARHPK 318
AEA+HPK
Sbjct: 309 AEAKHPK 329
>gb|CW308818.1|CW308818 104_797_11468871_148_35725_058 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468871, DNA
sequence
Length = 725
Score = 113 bits (242), Expect(2) = 1e-031
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +1 / -1
Query: 235 QCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN**AA 366
QCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN**AA
Sbjct: 374 QCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN**AA 243
Score = 89.0 bits (188), Expect(2) = 3e-023
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = -1 / +1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILH 237
WGKHW*RSFLGCLASACSLHLASEVVQ+KVC+QILH
Sbjct: 265 WGKHW*RSFLGCLASACSLHLASEVVQIKVCIQILH 372
Score = 43.7 bits (89), Expect(2) = 1e-031
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / -2
Query: 414 YIRCVSINGFXXXXXXXXSFVLPRLIMYCNPWLSACCAKN 533
+I CV+ + S VLP L M CNP LSACCAKN
Sbjct: 142 HILCVNGSQLLLLLLQLLSVVLPHLNM*CNPSLSACCAKN 23
Score = 41.8 bits (85), Expect(2) = 3e-023
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / +3
Query: 532 FLAQQADSQGLQYIIRRGNTNE 467
FLAQQADS+GL YI R GNT E
Sbjct: 24 FLAQQADSEGLHYIFRWGNTTE 89
>gb|BI351172.1|BI351172 IP1_70_G08.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 463
Score = 137 bits (293), Expect = 2e-031
Identities = 51/65 (78%), Positives = 59/65 (90%)
Frame = +1 / +1
Query: 175 EKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN 354
EKNKG KGSQLE NKKAM+IQCK+CMQTF+CTT+E KC+EHAEA+HPK D+YQCFPHLK
Sbjct: 4 EKNKGSKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLKK 183
Query: 355 **AAE 369
* A+E
Sbjct: 184 *KASE 198
>gb|CW092300.1|CW092300 104_454_10999068_116_33041_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10999068, DNA
sequence
Length = 556
Score = 113 bits (242), Expect = 2e-024
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +1 / -3
Query: 235 QCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN**AA 366
QCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN**AA
Sbjct: 203 QCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN**AA 72
>gb|AW923420.1|AW923420 DG1_51_G07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 347
Score = 77.1 bits (162), Expect(4) = 6e-023
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1 / +2
Query: 277 EAKCKEHAEARHPKNDLYQCFPHLKN**AA 366
EAKCKEHAEARHPKNDLYQCFPHLKN**AA
Sbjct: 2 EAKCKEHAEARHPKNDLYQCFPHLKN**AA 91
Score = 42.3 bits (86), Expect(4) = 6e-023
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1 / +1
Query: 475 CCPV*LCTVTLGCQPAVLKTI 537
CCP+*+C V L CQP VLKT+
Sbjct: 253 CCPI*ICNVILRCQPVVLKTL 315
Score = 20.8 bits (39), Expect(4) = 6e-023
Identities = 6/12 (50%), Positives = 6/12 (50%)
Frame = +2 / +1
Query: 449 CC*CGCFVRVAP 484
CC C CF P
Sbjct: 226 CCCCSCFRLCCP 261
Score = 20.3 bits (38), Expect(4) = 6e-023
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 366 RSICSAQLKDK 398
R ICSAQ ++K
Sbjct: 111 RGICSAQQREK 143
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 630,807,205
Number of Sequences: 832831
Number of extensions: 8429784
Number of successful extensions: 145520
Number of sequences better than 1.0e-020: 53
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 18066623463
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)