TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2762970.2.1
(578 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN139218.1|CN139218 OX1_16_F05.g1_A002 Oxidatively-stres... 385 e-107
gb|CN152404.1|CN152404 WOUND1_81_G07.g1_A002 Wounded leaves... 357 e-099
gb|CW179961.1|CW179961 104_594_11160385_148_36634_009 Sorgh... 99 1e-068
gb|CW371663.1|CW371663 fsbb001f047d21f0 Sorghum methylation... 164 2e-066
gb|CD208110.1|CD208110 HS1_31_F12.b1_A012 Heat-shocked seed... 176 9e-064
gb|AW680972.1|AW680972 WS1_9_F07.b1_A002 Water-stressed 1 (... 156 9e-058
gb|BG159096.1|BG159096 RHIZ2_17_H01.b1_A003 Rhizome2 (RHIZ2... 218 1e-055
gb|CN127419.1|CN127419 RHOH1_22_H08.g3_A002 Acid- and alkal... 155 1e-053
gb|BE594092.1|BE594092 WS1_102_B02.b1_A002 Water-stressed 1... 211 2e-053
gb|CN136159.1|CN136159 OX1_41_D06.b1_A002 Oxidatively-stres... 132 1e-050
gb|CW302724.1|CW302724 104_787_11464867_148_35670_080 Sorgh... 201 2e-050
gb|CW114801.1|CW114801 104_489_11106191_116_34571_086 Sorgh... 187 3e-050
gb|CN136233.1|CN136233 OX1_41_D06.g1_A002 Oxidatively-stres... 200 4e-050
gb|CW111471.1|CW111471 104_484_11104330_148_34526_033 Sorgh... 142 4e-048
gb|CW371581.1|CW371581 fsbb001f047b17f0 Sorghum methylation... 99 8e-047
gb|CN135804.1|CN135804 OX1_39_C01.b1_A002 Oxidatively-stres... 114 3e-045
gb|CN149685.1|CN149685 WOUND1_64_F12.b1_A002 Wounded leaves... 112 1e-044
gb|CW454568.1|CW454568 fsbb001f199b07f0 Sorghum methylation... 96 9e-044
gb|CF483805.1|CF483805 POL1_24_G05.g1_A002 Pollen Sorghum b... 99 8e-043
gb|CW058681.1|CW058681 104_301_10518874_114_30160 Sorghum m... 141 8e-042
gb|CW393711.1|CW393711 fsbb001f080o11f0 Sorghum methylation... 99 9e-040
gb|CN145015.1|CN145015 WOUND1_26_F10.b2_A002 Wounded leaves... 95 1e-039
gb|AW923989.1|AW923989 WS1_32_F04.b1_A002 Water-stressed 1 ... 162 8e-039
gb|CW302461.1|CW302461 104_786_11464731_116_35664_006 Sorgh... 111 1e-038
gb|CF429365.1|CF429365 PH1_21_E06.b1_A002 Phosphorous-defic... 161 2e-038
gb|BZ368104.1|BZ368104 id11d06.g1 WGS-SbicolorF (JM107 adap... 161 2e-038
gb|CD206527.1|CD206527 HS1_23_G12.b1_A012 Heat-shocked seed... 90 9e-038
gb|BF705329.1|BF705329 RHIZ2_3_F09.g1_A003 Rhizome2 (RHIZ2)... 156 7e-037
gb|CX617837.1|CX617837 GABR1_36_C12.b1_A002 GA- or brassino... 90 4e-036
gb|CD226009.1|CD226009 CCC1_42_G09.g1_A007 Callus culture/c... 152 8e-036
gb|CW066393.1|CW066393 104_313_10523660_114_30148 Sorghum m... 142 8e-033
gb|BE365282.1|BE365282 PI1_26_C04.b1_A002 Pathogen induced ... 138 1e-031
gb|AW678076.1|AW678076 WS1_13_D08.b1_A002 Water-stressed 1 ... 137 3e-031
gb|CW414214.1|CW414214 fsbb001f113l24f0 Sorghum methylation... 128 4e-029
gb|CW066394.1|CW066394 104_313_10523660_115_30149 Sorghum m... 115 5e-028
gb|BE361409.1|BE361409 DG1_71_B07.g1_A002 Dark Grown 1 (DG1... 85 9e-028
gb|CD225901.1|CD225901 CCC1_42_G09.b1_A007 Callus culture/c... 124 2e-027
gb|CD203987.1|CD203987 HS1_3_A09.b1_A012 Heat-shocked seedl... 121 2e-026
gb|BE594012.1|BE594012 WS1_101_B06.b1_A002 Water-stressed 1... 90 6e-025
gb|CW328842.1|CW328842 104_825_11479522_148_36001_045 Sorgh... 110 4e-023
gb|CD427685.1|CD427685 SA1_38_F06.b1_A002 Salicylic acid-tr... 90 4e-022
gb|BE593778.1|BE593778 WS1_102_B02.g1_A002 Water-stressed 1... 90 4e-022
gb|CD210700.1|CD210700 HS1_49_D04.b1_A012 Heat-shocked seed... 90 1e-021
gb|CD203868.1|CD203868 HS1_2_D11.b1_A012 Heat-shocked seedl... 90 1e-021
gb|CD426067.1|CD426067 SA1_16_H05.b1_A002 Salicylic acid-tr... 90 1e-021
gb|CD208631.1|CD208631 HS1_39_H06.b1_A012 Heat-shocked seed... 90 1e-021
gb|CD210830.1|CD210830 HS1_66_D06.b1_A012 Heat-shocked seed... 90 2e-021
gb|CD208473.1|CD208473 HS1_38_B09.b1_A012 Heat-shocked seed... 90 5e-021
gb|CD213892.1|CD213892 HS1_69_F11.b1_A012 Heat-shocked seed... 90 5e-021
gb|CD424420.1|CD424420 SA1_5_D06.b1_A002 Salicylic acid-tre... 90 5e-021
gb|BG103534.1|BG103534 RHIZ2_37_F11.g1_A003 Rhizome2 (RHIZ2... 90 5e-021
gb|CB925242.1|CB925242 ABA1_32_B04.b1_A012 Abscisic acid-tr... 90 5e-021
gb|CD206515.1|CD206515 HS1_23_H12.b1_A012 Heat-shocked seed... 90 5e-021
gb|CD427192.1|CD427192 SA1_18_A08.b1_A002 Salicylic acid-tr... 90 5e-021
>gb|CN139218.1|CN139218 OX1_16_F05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_16_F05_A002 5', mRNA sequence
Length = 838
Score = 385 bits (839), Expect(2) = e-107
Identities = 162/173 (93%), Positives = 165/173 (95%)
Frame = +2 / +3
Query: 59 GLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAG 238
GLFENPYPD+SLAGE+GKQEHRELAREAVRKSLVLLKNGKSS APLLPLPKKAGKILVAG
Sbjct: 27 GLFENPYPDASLAGEIGKQEHRELAREAVRKSLVLLKNGKSSSAPLLPLPKKAGKILVAG 206
Query: 239 SHANDLGNQCGGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSESPDSGVLADKYD 418
SHANDLGNQCGGWTITWQGSSGNTT GTTILSGIEATVDPSTQVVYSE+PDSGVL DKYD
Sbjct: 207 SHANDLGNQCGGWTITWQGSSGNTTVGTTILSGIEATVDPSTQVVYSENPDSGVLGDKYD 386
Query: 419 YAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
YAIVVVGEPPYAETFGDNLNLTIPAPGPSV QSVC KCVVVLISGR LVVE
Sbjct: 387 YAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCKATKCVVVLISGRPLVVE 545
Score = 345 bits (752), Expect(2) = 1e-095
Identities = 147/173 (84%), Positives = 149/173 (86%)
Frame = -3 / -1
Query: 576 STTSXLPEMRTTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYLSAST 397
STT LPEM TTTHL HTDW TLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYLS ST
Sbjct: 544 STTRGLPEMSTTTHLVALHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYLSPST 365
Query: 396 PLSGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILP 217
PLSG SEYTTCVLGSTVASIPERI PCHVIVHPPHWLP+SLAWLPATRILP
Sbjct: 364 PLSGFSEYTTCVLGSTVASIPERIVVPTVVLPLLPCHVIVHPPHWLPKSLAWLPATRILP 185
Query: 216 AFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARLESG*GFSNRP 58
AFFGRGS GA ED PFFRRTRDFLTASRA+SRCSCFP SPARL SG*GFSNRP
Sbjct: 184 AFFGRGSKGAEEDFPFFRRTRDFLTASRANSRCSCFPISPARLASG*GFSNRP 26
Score = 244 bits (531), Expect = 3e-064
Identities = 111/171 (64%), Positives = 119/171 (69%)
Frame = -2 / -3
Query: 577 LHHQXPAGDEDHNALGXSAHXXXXXXXXXXXRQVQVVAERLRVWRLPDHHDRVVVLVGQH 398
LHHQ P GDE H+ALG AH RQVQVVAERLRV RLPDHHDRVVVLV +H
Sbjct: 545 LHHQGPPGDEHHHALGRLAHRLDHARPRRRDRQVQVVAERLRVRRLPDHHDRVVVLVAEH 366
Query: 397 AAVRALRVHHLRAGVHGGLDPGEDRRAGSSVAAASLPRDRPPPXXXXXXXXXXXXXXDLA 218
AAVR LRVHHLRAG+HG LD GEDRRA VAAASLP DRP DL
Sbjct: 365 AAVRVLRVHHLRAGIHGRLDSGEDRRANGGVAAASLPCDRPSSALVAQVVGVATGDQDLT 186
Query: 217 GLLREGQQRSVGGLAVLQENQGFPDGFARQFPVFLLPELAGEARVGVRVLE 65
GLLREGQQ S GG VLQ+NQG PDGFA Q PVFLLP+ G+A +GVRVL+
Sbjct: 185 GLLREGQQGSRGGFPVLQKNQGLPDGFACQLPVFLLPDFTGKASIGVRVLK 33
Score = 94.1 bits (200), Expect(5) = 6e-046
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = +1 / +2
Query: 274 VDDHVARKQRQHYCRHDDPLRDRGHRGPQHAGGVLGEPGQRRAGRQ 411
+DDH+ARKQRQH+ HDDPLR+RG RG QHAGGVLGEPGQRRA RQ
Sbjct: 242 MDDHMARKQRQHHRWHDDPLRNRGDRGSQHAGGVLGEPGQRRARRQ 379
Score = 84.9 bits (180), Expect(5) = 6e-046
Identities = 32/44 (72%), Positives = 35/44 (79%)
Frame = +3 / +1
Query: 69 RTLTPTLASPASSGSKNTGNWRAKPSGNPWFS*RTASPPTLRCC 200
RTLTP LA P SGSKNTG+W AKPSG+PWF *RT +PP L CC
Sbjct: 37 RTLTPMLALPVKSGSKNTGSWHAKPSGSPWFF*RTGNPPLLPCC 168
Score = 30.2 bits (60), Expect(5) = 6e-046
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 469 QPEPDDPGARAE 504
QPEPDDPGA AE
Sbjct: 437 QPEPDDPGAGAE 472
Score = 26.6 bits (52), Expect(2) = e-107
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 34 DPSCQVHHG 60
DP CQVHHG
Sbjct: 1 DPPCQVHHG 27
Score = 26.1 bits (51), Expect(5) = 6e-046
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2 / +2
Query: 35 ILRVKFTMGLFENPYP 82
ILRVKFTMG P P
Sbjct: 2 ILRVKFTMGSI*EPLP 49
Score = 23.8 bits (46), Expect(2) = 1e-095
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -2
Query: 81 G*GFSNRPMVNLTRRI 34
G G PMVNLTRRI
Sbjct: 48 GKGSQIDPMVNLTRRI 1
Score = 23.4 bits (45), Expect(5) = 6e-046
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 544 GPHLRQAAGGG 576
G HLR+A GGG
Sbjct: 512 GAHLREAPGGG 544
>gb|CN152404.1|CN152404 WOUND1_81_G07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_81_G07_A002 5', mRNA sequence
Length = 841
Score = 357 bits (777), Expect(2) = e-099
Identities = 148/156 (94%), Positives = 152/156 (97%)
Frame = +2 / +3
Query: 56 MGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVA 235
MGLFENPYPD+SLAGE+GKQEHRELAREAVRKSLVLLKNGKSS APLLPLPKKAGKILVA
Sbjct: 30 MGLFENPYPDASLAGEIGKQEHRELAREAVRKSLVLLKNGKSSSAPLLPLPKKAGKILVA 209
Query: 236 GSHANDLGNQCGGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSESPDSGVLADKY 415
GSHANDLGNQCGGWTITWQGSSGNTT GTTILSGIEATVDPSTQVV+SE+PDSGVL DKY
Sbjct: 210 GSHANDLGNQCGGWTITWQGSSGNTTVGTTILSGIEATVDPSTQVVHSENPDSGVLGDKY 389
Query: 416 DYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVC 523
DYAIVVVGEPPYAETFGDNLNLTIPAPGPSV QSVC
Sbjct: 390 DYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVC 497
Score = 318 bits (693), Expect(2) = 7e-090
Identities = 136/160 (85%), Positives = 138/160 (86%)
Frame = -3 / -1
Query: 534 LAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYLSASTPLSGLSEYTTCVLG 355
L HTDW TLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYLS STPLSG SE TTCVLG
Sbjct: 508 LVALHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYLSPSTPLSGFSECTTCVLG 329
Query: 354 STVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDL 175
STVASIPERI PCHVIVHPPHWLP+SLAWLPATRILPAFFGRGS GA ED
Sbjct: 328 STVASIPERIVVPTVVLPLLPCHVIVHPPHWLPKSLAWLPATRILPAFFGRGSKGAEEDF 149
Query: 174 PFFRRTRDFLTASRASSRCSCFPSSPARLESG*GFSNRPM 55
PFFRRTRDFLTASRA+SRCSCFP SPARL SG*GFSNRPM
Sbjct: 148 PFFRRTRDFLTASRANSRCSCFPISPARLASG*GFSNRPM 29
Score = 222 bits (482), Expect(2) = 8e-060
Identities = 103/162 (63%), Positives = 110/162 (67%)
Frame = -2 / -3
Query: 532 GXSAHXXXXXXXXXXXRQVQVVAERLRVWRLPDHHDRVVVLVGQHAAVRALRVHHLRAGV 353
G AH RQVQVVAERLRV RLPDHHDRVVVLV +HAAVR LRVHHLRAG+
Sbjct: 506 GRLAHRLDHARPRRRDRQVQVVAERLRVRRLPDHHDRVVVLVAEHAAVRVLRVHHLRAGI 327
Query: 352 HGGLDPGEDRRAGSSVAAASLPRDRPPPXXXXXXXXXXXXXXDLAGLLREGQQRSVGGLA 173
HG LD GEDRRA VAAASLP DRP DL GLLREGQQ S GG
Sbjct: 326 HGRLDSGEDRRANGGVAAASLPCDRPSSALVAQVVGVATGDQDLTGLLREGQQGSRGGFP 147
Query: 172 VLQENQGFPDGFARQFPVFLLPELAGEARVGVRVLEQAHGEL 47
VLQ+NQG PDGFA Q PVFLLP+ G+A +GVRVL+ HG L
Sbjct: 146 VLQKNQGLPDGFACQLPVFLLPDFTGKASIGVRVLK*THGNL 21
Score = 92.2 bits (196), Expect(4) = 9e-045
Identities = 36/46 (78%), Positives = 40/46 (86%)
Frame = +1 / +2
Query: 274 VDDHVARKQRQHYCRHDDPLRDRGHRGPQHAGGVLGEPGQRRAGRQ 411
+DDH+ARKQRQH+ HDDPLR+RG RG QHAGG LGEPGQRRA RQ
Sbjct: 248 MDDHMARKQRQHHRWHDDPLRNRGDRGSQHAGGALGEPGQRRARRQ 385
Score = 91.3 bits (194), Expect(4) = 9e-045
Identities = 34/49 (69%), Positives = 37/49 (75%)
Frame = +3 / +1
Query: 54 PWACSRTLTPTLASPASSGSKNTGNWRAKPSGNPWFS*RTASPPTLRCC 200
PW RTLTP LA P SGSKNTG+W AKPSG+PWF *RT +PP L CC
Sbjct: 28 PWVYLRTLTPMLALPVKSGSKNTGSWHAKPSGSPWFF*RTGNPPLLPCC 174
Score = 31.6 bits (63), Expect(2) = 7e-090
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 577 LHHQXPAGDEDHNAL 533
LHHQ P GDE H+AL
Sbjct: 550 LHHQGPPGDEHHHAL 506
Score = 30.2 bits (60), Expect(2) = e-099
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2 / +2
Query: 533 KCVVVLISGRXLVVE 577
+CVVVLISGR LVVE
Sbjct: 506 QCVVVLISGRPLVVE 550
Score = 30.2 bits (60), Expect(4) = 9e-045
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 469 QPEPDDPGARAE 504
QPEPDDPGA AE
Sbjct: 443 QPEPDDPGAGAE 478
Score = 27.9 bits (55), Expect(2) = 8e-060
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / -2
Query: 576 STTSXLPEMRTTTH 535
STT LPEM TTTH
Sbjct: 549 STTRGLPEMSTTTH 508
Score = 23.4 bits (45), Expect(4) = 9e-045
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 544 GPHLRQAAGGG 576
G HLR+A GGG
Sbjct: 517 GAHLREAPGGG 549
>gb|CW179961.1|CW179961 104_594_11160385_148_36634_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11160385, DNA
sequence
Length = 658
Score = 99.1 bits (211), Expect(4) = 1e-068
Identities = 38/66 (57%), Positives = 49/66 (74%)
Frame = +2 / +2
Query: 380 ESPDSGVLADKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISG 559
+ D A Y+YA+V VGEPPYAET GD+ NLTIP+PGP V + VCG KCVV+++SG
Sbjct: 413 DKDDLAKSASDYEYAVVAVGEPPYAETAGDSKNLTIPSPGPEVIKDVCGLVKCVVLIVSG 592
Query: 560 RXLVVE 577
R LV++
Sbjct: 593 RPLVLQ 610
Score = 99.1 bits (211), Expect(4) = 1e-068
Identities = 44/58 (75%), Positives = 48/58 (82%)
Frame = +2 / +2
Query: 5 MSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGK 178
+ RI+DAV RILRVKFTMGLFE+P PD L ELG Q+HR LAREAVRKSLVLLKN K
Sbjct: 20 LDRINDAVSRILRVKFTMGLFEDPIPDPRLTKELGAQDHRALAREAVRKSLVLLKNKK 193
Score = 86.8 bits (184), Expect(4) = 1e-068
Identities = 34/55 (61%), Positives = 40/55 (72%)
Frame = +2 / +2
Query: 155 LVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAG 319
++L K P+LPL KKA KILVAGSHA+DLG+QCGGWTI WQG +GN G
Sbjct: 173 VLLKNKKKGQKDPMLPLDKKAKKILVAGSHAHDLGSQCGGWTIKWQGETGNNLTG 337
Score = 78.5 bits (166), Expect(3) = 1e-045
Identities = 38/69 (55%), Positives = 43/69 (62%)
Frame = -3 / -2
Query: 573 TTSXLPEMRTTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYLSASTP 394
+TS P+ +TTHL PHT T GPG G+VRF LSP VSAYGGSPT T A S A
Sbjct: 606 STSGRPDTMSTTHLTSPHTSLITSGPGDGMVRFLLSPAVSAYGGSPTATTAYS*SLALLA 427
Query: 393 LSGLSEYTT 367
S LS +T
Sbjct: 426 RSSLSGRST 400
Score = 77.6 bits (164), Expect(3) = 1e-045
Identities = 34/56 (60%), Positives = 41/56 (73%)
Frame = -2 / -1
Query: 178 LAVLQENQGFPDGFARQFPVFLLPELAGEARVGVRVLEQAHGELDTKDPVDGVVDS 11
L VL+E++ DG R+ PV L EL GEARV RVLE+AHGELD +DP DGVVD+
Sbjct: 193 LLVLEEHERLADGLPRERPVVLRAELLGEARVRDRVLEEAHGELDPEDPADGVVDA 26
Score = 65.8 bits (138), Expect(3) = 1e-045
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -3 / -2
Query: 291 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA 187
CH++V PPHWLPRS AWLPATRI AF GS G+
Sbjct: 309 CHLMVQPPHWLPRSWAWLPATRIFLAFLSSGSIGS 205
Score = 35.2 bits (71), Expect(4) = 1e-068
Identities = 17/33 (51%), Positives = 18/33 (54%)
Frame = +2 / +2
Query: 308 TTAGTTILSGIEATVDPSTQVVYSESPDSGVLA 406
T GTTIL I+ VD T V Y E PD LA
Sbjct: 332 TGVGTTILEAIKKAVDKKTTVDYVERPDKDDLA 430
>gb|CW371663.1|CW371663 fsbb001f047d21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f047d21, DNA
sequence
Length = 716
Score = 164 bits (354), Expect(3) = 5e-066
Identities = 70/79 (88%), Positives = 71/79 (89%)
Frame = +2 / +1
Query: 83 DSSLAGELGKQEHRELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGN 262
D+S LG EHRELAREAVRKSLVLLKNGKSS APLLPLPKKAGKILVAGSHANDLGN
Sbjct: 259 DASSCAGLGI*EHRELAREAVRKSLVLLKNGKSSSAPLLPLPKKAGKILVAGSHANDLGN 438
Query: 263 QCGGWTITWQGSSGNTTAG 319
QCGGWTITWQGSSGNTT G
Sbjct: 439 QCGGWTITWQGSSGNTTVG 495
Score = 141 bits (305), Expect(3) = 2e-066
Identities = 55/62 (88%), Positives = 57/62 (91%)
Frame = -3 / -1
Query: 291 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSC 112
CHVIVHPPHWLP+SLAWLPATRILPAFFGRGS GA ED PFFRRTRDFLTASRA+SRCS
Sbjct: 467 CHVIVHPPHWLPKSLAWLPATRILPAFFGRGSKGAEEDFPFFRRTRDFLTASRANSRCSY 288
Query: 111 FP 106
P
Sbjct: 287 IP 282
Score = 89.9 bits (191), Expect(4) = 7e-049
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +2 / +3
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQ 115
PMSRIDDAVYRILRVKFTMGLFENPYPD+SLAGE+GKQ
Sbjct: 90 PMSRIDDAVYRILRVKFTMGLFENPYPDASLAGEIGKQ 203
Score = 81.3 bits (172), Expect(3) = 2e-066
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = -3 / -2
Query: 117 SCFPSSPARLESG*GFSNRPMVNLTRRIL*TASSILLMG 1
+CFP SPARL SG*GFSNRPMVNLTRRIL*TASSILLMG
Sbjct: 205 TCFPISPARLASG*GFSNRPMVNLTRRIL*TASSILLMG 89
Score = 80.4 bits (170), Expect(3) = 3e-044
Identities = 39/65 (60%), Positives = 40/65 (61%)
Frame = -2 / -3
Query: 307 VAAASLPRDRPPPXXXXXXXXXXXXXXDLAGLLREGQQRSVGGLAVLQENQGFPDGFARQ 128
VAAASLP DRP DL GLLREGQQ S GG VLQ+NQG PDGFA Q
Sbjct: 483 VAAASLPCDRPSSALVAQVVGVATGDQDLTGLLREGQQGSRGGFPVLQKNQGLPDGFACQ 304
Query: 127 FPVFL 113
PVFL
Sbjct: 303 LPVFL 289
Score = 77.2 bits (163), Expect(3) = 5e-066
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +2 / +2
Query: 317 GTTILSGIEATVDPSTQVVYSESPDSGVLADKYD 418
GTTILSGIEATVDPSTQVVYSE+PDSGVL DKYD
Sbjct: 614 GTTILSGIEATVDPSTQVVYSENPDSGVLGDKYD 715
Score = 71.3 bits (150), Expect(4) = 7e-049
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +1 / +1
Query: 316 RHDDPLRDRGHRGPQHAGGVLGEPGQRRAGRQ 411
RHDDPLR+RG RG QHAGGVLGEPGQRRA RQ
Sbjct: 613 RHDDPLRNRGDRGSQHAGGVLGEPGQRRARRQ 708
Score = 70.8 bits (149), Expect(3) = 3e-044
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = -2 / -1
Query: 115 LLPELAGEARVGVRVLEQAHGELDTKDPVDGVVDSAHG 2
LLP+ G+A +GVRVL+ HGELDT+DPVDG+VDSAHG
Sbjct: 203 LLPDFTGKASIGVRVLK*THGELDTEDPVDGIVDSAHG 90
Score = 69.9 bits (147), Expect(3) = 2e-066
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = -2 / -2
Query: 418 VVLVGQHAAVRALRVHHLRAGVHGGLDPGEDRRAGS 311
VVLV +HAAVR LRVHHLRAG+HG LD GEDRRA S
Sbjct: 715 VVLVAEHAAVRVLRVHHLRAGIHGRLDSGEDRRACS 608
Score = 68.1 bits (143), Expect(3) = 3e-044
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = -3 / -3
Query: 417 SYLSASTPLSGLSEYTTCVLGSTVASIPERI 325
SYLS STPLSG SEYTTCVLGSTVASIPERI
Sbjct: 714 SYLSPSTPLSGFSEYTTCVLGSTVASIPERI 622
Score = 59.9 bits (125), Expect(4) = 7e-049
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +3 / +2
Query: 114 KNTGNWRAKPSGNPWFS*RTASPPTLRCC 200
+NTG+W AKPSG+PWF *RT +PP L CC
Sbjct: 290 RNTGSWHAKPSGSPWFF*RTGNPPLLPCC 376
Score = 51.2 bits (106), Expect(3) = 5e-066
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +1 / +2
Query: 1 PHEQNRRRRLQDPSCQVHHGPV 66
PHEQNRR RLQDP CQVHHG +
Sbjct: 89 PHEQNRRCRLQDPPCQVHHGSI 154
Score = 30.7 bits (61), Expect(4) = 7e-049
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +1 / +3
Query: 274 VDDHVARKQRQHY 312
+DDH+ARKQRQH+
Sbjct: 450 MDDHMARKQRQHH 488
>gb|CD208110.1|CD208110 HS1_31_F12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_31_F12_A012 3', mRNA sequence
Length = 721
Score = 176 bits (381), Expect(2) = 9e-064
Identities = 72/96 (75%), Positives = 82/96 (85%)
Frame = +2 / +2
Query: 107 GKQEHRELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTIT 286
GKQEHR+LAREAVRKSLVLLKNGK APLLPLPKKA KILVAGSHA++LG QCGGWTI
Sbjct: 2 GKQEHRDLAREAVRKSLVLLKNGKPGDAPLLPLPKKAAKILVAGSHADNLGYQCGGWTIE 181
Query: 287 WQGSSGNTTAGTTILSGIEATVDPSTQVVYSESPDS 394
WQG +G T GTTIL ++A VDPST VV++E+PD+
Sbjct: 182 WQGDTGRITVGTTILDAVKAAVDPSTTVVFAENPDA 289
Score = 131 bits (282), Expect(2) = 9e-047
Identities = 60/95 (63%), Positives = 61/95 (64%)
Frame = -3 / -2
Query: 390 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAF 211
SG S TT V GST A RI PCH IVHPPHW PR AWLPATRIL AF
Sbjct: 285 SGFSANTTVVDGSTAAFTASRIVVPTVMRPVSPCHSIVHPPHW*PRLSAWLPATRILAAF 106
Query: 210 FGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFP 106
GRGS+GA LPF R T DFLTASRA S CSCFP
Sbjct: 105 LGRGSSGASPGLPFLRSTSDFLTASRARSLCSCFP 1
Score = 89.9 bits (191), Expect(2) = 9e-064
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2 / +2
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VLISGR +V++
Sbjct: 311 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGAVRCATVLISGRPVVIQ 475
Score = 75.8 bits (160), Expect(2) = 9e-047
Identities = 31/50 (62%), Positives = 34/50 (68%)
Frame = -3 / -2
Query: 570 TSXLPEMRTTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA 421
T+ P M T H PHT W LGPG+GIVRFRLSP VS YG SPT T+A
Sbjct: 468 TTGRPLMSTVAHRTAPHTVWTVLGPGSGIVRFRLSPLVSVYGCSPTATMA 319
>gb|AW680972.1|AW680972 WS1_9_F07.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 500
Score = 156 bits (337), Expect(2) = 9e-058
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = +2 / +3
Query: 134 REAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTT 313
REAVRKSLVLLKNGK APLLPLPKKA KILVAGSHA++LG QCGGWTI WQG +G T
Sbjct: 3 REAVRKSLVLLKNGKPGDAPLLPLPKKAAKILVAGSHADNLGYQCGGWTIEWQGDTGRIT 182
Query: 314 AGTTILSGIEATVDPSTQVVYSESPDS 394
GTTIL ++A VDPST VV++E+PD+
Sbjct: 183 VGTTILDAVKAAVDPSTTVVFAENPDA 263
Score = 113 bits (242), Expect(2) = 3e-041
Identities = 53/86 (61%), Positives = 54/86 (62%)
Frame = -3 / -2
Query: 390 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAF 211
SG S TT V GST A RI PCH IVHPPHW PR AWLPATRIL AF
Sbjct: 259 SGFSANTTVVDGSTAAFTASRIVVPTVMRPVSPCHSIVHPPHW*PRLSAWLPATRILAAF 80
Query: 210 FGRGSNGA*EDLPFFRRTRDFLTASR 133
GRGS+GA LPF R T DFLTASR
Sbjct: 79 LGRGSSGASPGLPFLRSTSDFLTASR 2
Score = 89.9 bits (191), Expect(2) = 9e-058
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2 / +3
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VLISGR +V++
Sbjct: 285 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGAVRCATVLISGRPVVIQ 449
Score = 75.8 bits (160), Expect(2) = 3e-041
Identities = 31/50 (62%), Positives = 34/50 (68%)
Frame = -3 / -2
Query: 570 TSXLPEMRTTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA 421
T+ P M T H PHT W LGPG+GIVRFRLSP VS YG SPT T+A
Sbjct: 442 TTGRPLMSTVAHRTAPHTVWTVLGPGSGIVRFRLSPLVSVYGCSPTATMA 293
>gb|BG159096.1|BG159096 RHIZ2_17_H01.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 425
Score = 218 bits (474), Expect = 1e-055
Identities = 91/95 (95%), Positives = 94/95 (98%)
Frame = +2 / +3
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKS 181
PMSRIDDAVYRILRVKFTMGLFENPYPD+SLAGE+GKQEHRELAREAVRKSLVLLKNGKS
Sbjct: 141 PMSRIDDAVYRILRVKFTMGLFENPYPDASLAGEIGKQEHRELAREAVRKSLVLLKNGKS 320
Query: 182 SYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTIT 286
S +PLLPLPKKAGKILVAGSHANDLGNQCGGWTIT
Sbjct: 321 SSSPLLPLPKKAGKILVAGSHANDLGNQCGGWTIT 425
Score = 207 bits (449), Expect = 6e-053
Identities = 87/95 (91%), Positives = 89/95 (93%)
Frame = -3 / -2
Query: 285 VIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFP 106
VIVHPPHWLP+SLAWLPATRILPAFFGRGS G ED PFFRRTRDFLTASRA+SRCSCFP
Sbjct: 424 VIVHPPHWLPKSLAWLPATRILPAFFGRGSKGEEEDFPFFRRTRDFLTASRANSRCSCFP 245
Query: 105 SSPARLESG*GFSNRPMVNLTRRIL*TASSILLMG 1
SPARL SG*GFSNRPMVNLTRRIL*TASSILLMG
Sbjct: 244 ISPARLASG*GFSNRPMVNLTRRIL*TASSILLMG 140
Score = 131 bits (282), Expect = 6e-030
Identities = 57/94 (60%), Positives = 64/94 (68%)
Frame = -2 / -1
Query: 283 DRPPPXXXXXXXXXXXXXXDLAGLLREGQQRSVGGLAVLQENQGFPDGFARQFPVFLLPE 104
DRP DL GLLREGQQ GG VLQ+NQG PDGFA Q PVFLLP+
Sbjct: 422 DRPSSALVAQVVGVATGDQDLTGLLREGQQGRRGGFPVLQKNQGLPDGFACQLPVFLLPD 243
Query: 103 LAGEARVGVRVLEQAHGELDTKDPVDGVVDSAHG 2
G+A +GVRVL+ HGELDT+DPVDG+VDSAHG
Sbjct: 242 FTGKASIGVRVLK*THGELDTEDPVDGIVDSAHG 141
Score = 120 bits (259), Expect = 9e-027
Identities = 49/66 (74%), Positives = 52/66 (78%)
Frame = +3 / +1
Query: 3 P*AESTTPSTGSFVSSSPWACSRTLTPTLASPASSGSKNTGNWRAKPSGNPWFS*RTASP 182
P*AEST PSTGS VSSSPW RTLTP LA P SGSKNTG+W AKPSG+PWF *RT +P
Sbjct: 142 P*AESTMPSTGSSVSSSPWVYLRTLTPMLALPVKSGSKNTGSWHAKPSGSPWFF*RTGNP 321
Query: 183 PTLRCC 200
P L CC
Sbjct: 322 PLLPCC 339
>gb|CN127419.1|CN127419 RHOH1_22_H08.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_22_H08_A002 5', mRNA sequence
Length = 820
Score = 155 bits (334), Expect(2) = 1e-053
Identities = 63/87 (72%), Positives = 73/87 (83%)
Frame = +2 / +1
Query: 134 REAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTT 313
REAVRKSLVLLKNG+ APLLPLPKKA KILVAGSHA++LG QCGGWTI WQG +G T
Sbjct: 400 REAVRKSLVLLKNGRPGDAPLLPLPKKAAKILVAGSHADNLGYQCGGWTIEWQGDTGRIT 579
Query: 314 AGTTILSGIEATVDPSTQVVYSESPDS 394
GTTIL ++A VDPST VV++E+PD+
Sbjct: 580 VGTTILDAVKAAVDPSTTVVFAENPDA 660
Score = 114 bits (245), Expect(2) = 3e-040
Identities = 54/88 (61%), Positives = 55/88 (62%)
Frame = -3 / -3
Query: 390 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAF 211
SG S TT V GST A RI PCH IVHPPHW PR AWLPATRIL AF
Sbjct: 656 SGFSANTTVVDGSTAAFTASRIVVPTVMRPVSPCHSIVHPPHW*PRLSAWLPATRILAAF 477
Query: 210 FGRGSNGA*EDLPFFRRTRDFLTASRAS 127
GRGS+GA LPF R T DFLTASR S
Sbjct: 476 LGRGSSGASPGLPFLRSTSDFLTASRKS 393
Score = 77.6 bits (164), Expect(2) = 1e-053
Identities = 30/46 (65%), Positives = 34/46 (73%)
Frame = +2 / +1
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVL 550
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VL
Sbjct: 682 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGAVRCATVL 819
Score = 70.8 bits (149), Expect(2) = 3e-040
Identities = 28/42 (66%), Positives = 30/42 (71%)
Frame = -3 / -3
Query: 546 TTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA 421
T H PHT W LGPG+GIVRFRLSP VS YG SPT T+A
Sbjct: 815 TVAHRTAPHTVWTVLGPGSGIVRFRLSPLVSVYGCSPTATMA 690
>gb|BE594092.1|BE594092 WS1_102_B02.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 493
Score = 211 bits (457), Expect = 2e-053
Identities = 90/110 (81%), Positives = 95/110 (86%)
Frame = +2 / +3
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKS 181
PMSRIDDAV RILRVKFTMGLFENP PD SLA +LGKQEHR+LAREAVRKSLVLLKNGK
Sbjct: 159 PMSRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLAREAVRKSLVLLKNGKP 338
Query: 182 SYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAGTTIL 331
APLLPLPKKA KILVAGSHA++LG QCGGWTI WQG +G T TTIL
Sbjct: 339 GDAPLLPLPKKAAKILVAGSHADNLGYQCGGWTIEWQGDTGRITVXTTIL 488
Score = 173 bits (375), Expect = 9e-043
Identities = 76/97 (78%), Positives = 78/97 (80%)
Frame = -3 / -1
Query: 291 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSC 112
CH IVHPPHW PR AWLPATRIL AF GRGS+GA LPF R T DFLTASRA S CSC
Sbjct: 448 CHSIVHPPHW*PRLSAWLPATRILAAFLGRGSSGASPGLPFLRSTSDFLTASRARSLCSC 269
Query: 111 FPSSPARLESG*GFSNRPMVNLTRRIL*TASSILLMG 1
FPS ARL SG GFSNRPMVNLTRRIL TASSILL+G
Sbjct: 268 FPSWSARLGSGMGFSNRPMVNLTRRILVTASSILLIG 158
Score = 115 bits (248), Expect = 3e-025
Identities = 56/109 (51%), Positives = 64/109 (58%)
Frame = -2 / -3
Query: 331 EDRRAGSSVAAASLPRDRPPPXXXXXXXXXXXXXXDLAGLLREGQQRSVGGLAVLQENQG 152
+DR A +LP DRPP DL GLL +GQQR V LAVL+E+Q
Sbjct: 488 QDRGADGDAPRVALPLDRPPAALVTQVVGVAPGDQDLGGLLGQGQQRRVAWLAVLEEHQR 309
Query: 151 FPDGFARQFPVFLLPELAGEARVGVRVLEQAHGELDTKDPVDGVVDSAH 5
P RQ PV LLP+L GEARV VLEQAHGELD ++P GVVD AH
Sbjct: 308 LPHRLPRQVPVLLLPQLVGEARVRHGVLEQAHGELDAQNPRHGVVDPAH 162
>gb|CN136159.1|CN136159 OX1_41_D06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D06_A002 3', mRNA sequence
Length = 823
Score = 132 bits (284), Expect(2) = 1e-050
Identities = 52/75 (69%), Positives = 61/75 (81%)
Frame = +2 / +3
Query: 170 NGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAGTTILSGIEAT 349
NGK APLLPLPKKA KILVAGSHA++LG QCGGWTI WQG +G T GTTIL ++A
Sbjct: 3 NGKPGDAPLLPLPKKAAKILVAGSHADNLGYQCGGWTIEWQGDTGRITVGTTILDAVKAA 182
Query: 350 VDPSTQVVYSESPDS 394
VDPST VV++E+PD+
Sbjct: 183 VDPSTTVVFAENPDA 227
Score = 94.1 bits (200), Expect(2) = 1e-035
Identities = 44/74 (59%), Positives = 45/74 (60%)
Frame = -3 / -1
Query: 390 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAF 211
SG S TT V GST A RI PCH IVHPPHW PR AWLPATRIL AF
Sbjct: 223 SGFSANTTVVDGSTAAFTASRIVVPTVMRPVSPCHSIVHPPHW*PRLSAWLPATRILAAF 44
Query: 210 FGRGSNGA*EDLPF 169
GRGS+GA LPF
Sbjct: 43 LGRGSSGASPGLPF 2
Score = 89.9 bits (191), Expect(2) = 1e-050
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2 / +3
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VLISGR +V++
Sbjct: 249 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGAVRCATVLISGRPVVIQ 413
Score = 75.8 bits (160), Expect(2) = 1e-035
Identities = 31/50 (62%), Positives = 34/50 (68%)
Frame = -3 / -1
Query: 570 TSXLPEMRTTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA 421
T+ P M T H PHT W LGPG+GIVRFRLSP VS YG SPT T+A
Sbjct: 406 TTGRPLMSTVAHRTAPHTVWTVLGPGSGIVRFRLSPLVSVYGCSPTATMA 257
>gb|CW302724.1|CW302724 104_787_11464867_148_35670_080 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464867, DNA
sequence
Length = 640
Score = 201 bits (436), Expect = 2e-050
Identities = 85/101 (84%), Positives = 90/101 (89%)
Frame = +2 / +3
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKS 181
PMSRIDDAV RILRVKFTMGLFENP PD SLA +LGKQEHR+LAREAVRKSLVLLKNGK
Sbjct: 333 PMSRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLAREAVRKSLVLLKNGKP 512
Query: 182 SYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSG 304
APLLPLPKKA KILVAGSHA++LG QCGGWTI WQG +G
Sbjct: 513 GDAPLLPLPKKAAKILVAGSHADNLGYQCGGWTIEWQGDTG 635
Score = 173 bits (375), Expect = 9e-043
Identities = 76/97 (78%), Positives = 78/97 (80%)
Frame = -3 / -1
Query: 291 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSC 112
CH IVHPPHW PR AWLPATRIL AF GRGS+GA LPF R T DFLTASRA S CSC
Sbjct: 622 CHSIVHPPHW*PRLSAWLPATRILAAFLGRGSSGASPGLPFLRSTSDFLTASRARSLCSC 443
Query: 111 FPSSPARLESG*GFSNRPMVNLTRRIL*TASSILLMG 1
FPS ARL SG GFSNRPMVNLTRRIL TASSILL+G
Sbjct: 442 FPSWSARLGSGMGFSNRPMVNLTRRILVTASSILLIG 332
Score = 110 bits (236), Expect = 1e-023
Identities = 53/97 (54%), Positives = 60/97 (61%)
Frame = -2 / -3
Query: 295 SLPRDRPPPXXXXXXXXXXXXXXDLAGLLREGQQRSVGGLAVLQENQGFPDGFARQFPVF 116
+LP DRPP DL GLL +GQQR V LAVL+E+Q P RQ PV
Sbjct: 626 ALPLDRPPAALVTQVVGVAPGDQDLGGLLGQGQQRRVAWLAVLEEHQRLPHRLPRQVPVL 447
Query: 115 LLPELAGEARVGVRVLEQAHGELDTKDPVDGVVDSAH 5
LLP+L GEARV VLEQAHGELD ++P GVVD AH
Sbjct: 446 LLPQLVGEARVRHGVLEQAHGELDAQNPRHGVVDPAH 336
>gb|CW114801.1|CW114801 104_489_11106191_116_34571_086 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11106191, DNA
sequence
Length = 581
Score = 187 bits (405), Expect(2) = 3e-050
Identities = 80/87 (91%), Positives = 81/87 (93%)
Frame = +2 / -2
Query: 317 GTTILSGIEATVDPSTQVVYSESPDSGVLADKYDYAIVVVGEPPYAETFGDNLNLTIPAP 496
GTTILSGIEATVDPSTQVVYSE+PDSGVL DKYDYAIVVVGEPPYAETFGDNLNLTIPAP
Sbjct: 424 GTTILSGIEATVDPSTQVVYSENPDSGVLGDKYDYAIVVVGEPPYAETFGDNLNLTIPAP 245
Query: 497 GPSVXQSVCGXAKCVVVLISGRXLVVE 577
GPSV QSVC KCVVVLISGR LVVE
Sbjct: 244 GPSVIQSVCKATKCVVVLISGRPLVVE 164
Score = 174 bits (377), Expect = 5e-043
Identities = 75/84 (89%), Positives = 75/84 (89%)
Frame = -3 / +3
Query: 576 STTSXLPEMRTTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYLSAST 397
STT LPEM TTTHL HTDW TLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYLS ST
Sbjct: 165 STTRGLPEMSTTTHLVALHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYLSPST 344
Query: 396 PLSGLSEYTTCVLGSTVASIPERI 325
PLSG SEYTTCVLGSTVASIPERI
Sbjct: 345 PLSGFSEYTTCVLGSTVASIPERI 416
Score = 145 bits (312), Expect = 4e-034
Identities = 64/89 (71%), Positives = 67/89 (75%)
Frame = -2 / +2
Query: 577 LHHQXPAGDEDHNALGXSAHXXXXXXXXXXXRQVQVVAERLRVWRLPDHHDRVVVLVGQH 398
LHHQ P GDE H+ALG AH RQVQVVAERLRV RLPDHHDRVVVLV +H
Sbjct: 164 LHHQGPPGDEHHHALGRLAHRLDHARPRRRDRQVQVVAERLRVRRLPDHHDRVVVLVAEH 343
Query: 397 AAVRALRVHHLRAGVHGGLDPGEDRRAGS 311
AAVR LRVHHLRAG+HG LD GEDRRA S
Sbjct: 344 AAVRVLRVHHLRAGIHGRLDSGEDRRACS 430
Score = 33.4 bits (67), Expect(2) = 3e-050
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2 / -1
Query: 281 ITWQGSSGNTTAG 319
ITWQGSSGNTT G
Sbjct: 581 ITWQGSSGNTTVG 543
>gb|CN136233.1|CN136233 OX1_41_D06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D06_A002 5', mRNA sequence
Length = 850
Score = 200 bits (433), Expect = 4e-050
Identities = 85/104 (81%), Positives = 90/104 (86%)
Frame = +2 / +1
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKS 181
PMSRIDDAV RILRVKFTMGLFENP PD SLA +LGKQEHR+LAREAVRKSLVLLKNGK
Sbjct: 538 PMSRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLAREAVRKSLVLLKNGKP 717
Query: 182 SYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTT 313
APLLPLPKKA KILVAGSHA++L QCGGWTI WQG +G T
Sbjct: 718 GDAPLLPLPKKAAKILVAGSHADNLXYQCGGWTIEWQGDTGRIT 849
Score = 169 bits (366), Expect = 2e-041
Identities = 75/97 (77%), Positives = 77/97 (79%)
Frame = -3 / -3
Query: 291 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSC 112
CH IVHPPHW R AWLPATRIL AF GRGS+GA LPF R T DFLTASRA S CSC
Sbjct: 827 CHSIVHPPHW*XRLSAWLPATRILAAFLGRGSSGASPGLPFLRSTSDFLTASRARSLCSC 648
Query: 111 FPSSPARLESG*GFSNRPMVNLTRRIL*TASSILLMG 1
FPS ARL SG GFSNRPMVNLTRRIL TASSILL+G
Sbjct: 647 FPSWSARLGSGMGFSNRPMVNLTRRILVTASSILLIG 537
Score = 110 bits (236), Expect = 1e-023
Identities = 53/97 (54%), Positives = 60/97 (61%)
Frame = -2 / -2
Query: 295 SLPRDRPPPXXXXXXXXXXXXXXDLAGLLREGQQRSVGGLAVLQENQGFPDGFARQFPVF 116
+LP DRPP DL GLL +GQQR V LAVL+E+Q P RQ PV
Sbjct: 831 ALPLDRPPAALVTQVVGVAPGDQDLGGLLGQGQQRRVAWLAVLEEHQRLPHRLPRQVPVL 652
Query: 115 LLPELAGEARVGVRVLEQAHGELDTKDPVDGVVDSAH 5
LLP+L GEARV VLEQAHGELD ++P GVVD AH
Sbjct: 651 LLPQLVGEARVRHGVLEQAHGELDAQNPRHGVVDPAH 541
>gb|CW111471.1|CW111471 104_484_11104330_148_34526_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104330, DNA
sequence
Length = 572
Score = 142 bits (306), Expect(3) = 4e-048
Identities = 61/71 (85%), Positives = 64/71 (90%)
Frame = +2 / -1
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKS 181
PMSRIDDAV RILRVKFTMGLF+NPY D+SL GELGKQEHR+LAREAVRKSLVLLKNGK
Sbjct: 479 PMSRIDDAVRRILRVKFTMGLFDNPYADTSLVGELGKQEHRDLAREAVRKSLVLLKNGKP 300
Query: 182 SYAPLLPLPKK 214
PLLPLPKK
Sbjct: 299 GAKPLLPLPKK 267
Score = 105 bits (226), Expect(3) = 6e-036
Identities = 48/72 (66%), Positives = 53/72 (73%)
Frame = -3 / +1
Query: 216 AFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARLESG*GFSNRPMVNLTRR 37
+F G GS+G LPF RRTRD TASRA SRCSC PSSP RL S *G S RPMVNLTRR
Sbjct: 265 SFLGSGSSGFAPGLPFLRRTRDLRTASRARSRCSCLPSSPTRLVSA*GLSKRPMVNLTRR 444
Query: 36 IL*TASSILLMG 1
+ TASS+ L+G
Sbjct: 445 MRRTASSMRLIG 480
Score = 57.1 bits (119), Expect(3) = 6e-036
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -3 / +1
Query: 291 CHVIVHPPHWLPRSLAWLPATRILP 217
C V+V PPHWLPRS AWLPATR LP
Sbjct: 181 CQVMVQPPHWLPRSSAWLPATRTLP 255
Score = 51.6 bits (107), Expect(3) = 4e-048
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +2 / -1
Query: 296 SSGNTTAGTTILSGIEATVDPSTQVVYSESPDSG 397
+ N TAGTTIL GI V P T VVYSE+PD+G
Sbjct: 173 TGNNLTAGTTILDGIRRAVAPGTDVVYSENPDAG 72
Score = 38.4 bits (78), Expect(3) = 4e-048
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +2 / -1
Query: 410 KYDYAIVVVGEPPYAE 457
++DYA+VVVGEPPYAE
Sbjct: 50 RFDYAVVVVGEPPYAE 3
Score = 27.5 bits (54), Expect(3) = 6e-036
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -3 / +1
Query: 459 VSAYGGSPTTTIA*S 415
VSA GGSPTTT A*S
Sbjct: 1 VSA*GGSPTTTTA*S 45
>gb|CW371581.1|CW371581 fsbb001f047b17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f047b17, DNA
sequence
Length = 669
Score = 99.1 bits (211), Expect(4) = 8e-047
Identities = 44/58 (75%), Positives = 48/58 (82%)
Frame = +2 / +2
Query: 5 MSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGK 178
+ RI+DAV RILRVKFTMGLFE+P PD L ELG Q+HR LAREAVRKSLVLLKN K
Sbjct: 197 LDRINDAVSRILRVKFTMGLFEDPIPDPRLTKELGAQDHRALAREAVRKSLVLLKNKK 370
Score = 86.8 bits (184), Expect(4) = 8e-047
Identities = 34/55 (61%), Positives = 40/55 (72%)
Frame = +2 / +2
Query: 155 LVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAG 319
++L K P+LPL KKA KILVAGSHA+DLG+QCGGWTI WQG +GN G
Sbjct: 350 VLLKNKKKGQKDPMLPLDKKAKKILVAGSHAHDLGSQCGGWTIKWQGETGNNLTG 514
Score = 77.6 bits (164), Expect(3) = 8e-032
Identities = 34/56 (60%), Positives = 41/56 (73%)
Frame = -2 / -3
Query: 178 LAVLQENQGFPDGFARQFPVFLLPELAGEARVGVRVLEQAHGELDTKDPVDGVVDS 11
L VL+E++ DG R+ PV L EL GEARV RVLE+AHGELD +DP DGVVD+
Sbjct: 370 LLVLEEHERLADGLPRERPVVLRAELLGEARVRDRVLEEAHGELDPEDPADGVVDA 203
Score = 65.8 bits (138), Expect(3) = 8e-032
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -3 / -1
Query: 291 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA 187
CH++V PPHWLPRS AWLPATRI AF GS G+
Sbjct: 486 CHLMVQPPHWLPRSWAWLPATRIFLAFLSSGSIGS 382
Score = 35.2 bits (71), Expect(4) = 8e-047
Identities = 17/33 (51%), Positives = 18/33 (54%)
Frame = +2 / +2
Query: 308 TTAGTTILSGIEATVDPSTQVVYSESPDSGVLA 406
T GTTIL I+ VD T V Y E PD LA
Sbjct: 509 TGVGTTILEAIKKAVDKKTTVDYVERPDKDDLA 607
Score = 31.6 bits (63), Expect(3) = 8e-032
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = -2 / -3
Query: 409 VGQHAAVRALRVHHLRAGVHGGLDPGEDRRAGSSVAAASL 290
+GQ VRAL V H R VH LD +DR A + A L
Sbjct: 610 LGQVVLVRALHVVHRRLLVHRLLDGLQDRGADAGEVVAGL 491
Score = 24.7 bits (48), Expect(4) = 8e-047
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2 / +2
Query: 380 ESPDSGVLADKYDYAIVVVGEP 445
+ D A Y+YA+V VG P
Sbjct: 590 DKDDLAKSASDYEYAVVAVGRP 655
>gb|CN135804.1|CN135804 OX1_39_C01.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_39_C01_A002 3', mRNA sequence
Length = 790
Score = 114 bits (245), Expect(2) = 3e-045
Identities = 44/64 (68%), Positives = 53/64 (82%)
Frame = +2 / +3
Query: 203 LPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSE 382
LPKKA KILVAGSHA++LG QCGGWTI WQG +G T GTTIL ++A VDPST VV++E
Sbjct: 3 LPKKAAKILVAGSHADNLGYQCGGWTIEWQGDTGRITVGTTILDAVKAAVDPSTTVVFAE 182
Query: 383 SPDS 394
+PD+
Sbjct: 183 NPDA 194
Score = 89.5 bits (190), Expect(2) = 3e-045
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2 / +3
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VLISGR +V++
Sbjct: 216 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGALRCATVLISGRPVVIQ 380
Score = 79.5 bits (168), Expect(2) = 4e-031
Identities = 37/63 (58%), Positives = 37/63 (58%)
Frame = -3 / -1
Query: 390 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAF 211
SG S TT V GST A RI PCH IVHPPHW PR AWLPATRIL AF
Sbjct: 190 SGFSANTTVVDGSTAAFTASRIVVPTVMRPVSPCHSIVHPPHW*PRLSAWLPATRILAAF 11
Query: 210 FGR 202
GR
Sbjct: 10 LGR 2
Score = 75.4 bits (159), Expect(2) = 4e-031
Identities = 31/50 (62%), Positives = 34/50 (68%)
Frame = -3 / -1
Query: 570 TSXLPEMRTTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA 421
T+ P M T H PHT W LGPG+GIVRFRLSP VS YG SPT T+A
Sbjct: 373 TTGRPLMSTVAHRKAPHTVWTVLGPGSGIVRFRLSPLVSVYGCSPTATMA 224
>gb|CN149685.1|CN149685 WOUND1_64_F12.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_64_F12_A002 3', mRNA sequence
Length = 788
Score = 112 bits (241), Expect(2) = 1e-044
Identities = 43/63 (68%), Positives = 52/63 (82%)
Frame = +2 / +3
Query: 206 PKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSES 385
PKKA KILVAGSHA++LG QCGGWTI WQG +G T GTTIL ++A VDPST VV++E+
Sbjct: 3 PKKAAKILVAGSHADNLGYQCGGWTIEWQGDTGRITVGTTILDAVKAAVDPSTTVVFAEN 182
Query: 386 PDS 394
PD+
Sbjct: 183 PDA 191
Score = 89.5 bits (190), Expect(2) = 1e-044
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2 / +3
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VLISGR +V++
Sbjct: 213 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGALRCATVLISGRPVVIQ 377
Score = 77.2 bits (163), Expect(2) = 2e-030
Identities = 36/62 (58%), Positives = 36/62 (58%)
Frame = -3 / -2
Query: 390 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAF 211
SG S TT V GST A RI PCH IVHPPHW PR AWLPATRIL AF
Sbjct: 187 SGFSANTTVVDGSTAAFTASRIVVPTVMRPVSPCHSIVHPPHW*PRLSAWLPATRILAAF 8
Query: 210 FG 205
G
Sbjct: 7 LG 2
Score = 75.4 bits (159), Expect(2) = 2e-030
Identities = 31/50 (62%), Positives = 34/50 (68%)
Frame = -3 / -2
Query: 570 TSXLPEMRTTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA 421
T+ P M T H PHT W LGPG+GIVRFRLSP VS YG SPT T+A
Sbjct: 370 TTGRPLMSTVAHRKAPHTVWTVLGPGSGIVRFRLSPLVSVYGCSPTATMA 221
>gb|CW454568.1|CW454568 fsbb001f199b07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f199b07, DNA
sequence
Length = 398
Score = 96.3 bits (205), Expect(3) = 9e-044
Identities = 37/64 (57%), Positives = 47/64 (73%)
Frame = +2 / +1
Query: 380 ESPDSGVLADKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISG 559
+ D A Y+YA+V VGEPPYAET GD+ NLTIP+PGP V + VCG KCVV+++SG
Sbjct: 205 DKDDLAKSASDYEYAVVAVGEPPYAETAGDSKNLTIPSPGPEVIKDVCGLVKCVVLIVSG 384
Query: 560 RXLV 571
R L+
Sbjct: 385 RPLL 396
Score = 85.4 bits (181), Expect(3) = 9e-044
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = +2 / +1
Query: 191 PLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAG 319
P+LPL KKA KILVAGSHA+DLG+QCGGWTI WQG +GN G
Sbjct: 1 PMLPLDKKAKKILVAGSHAHDLGSQCGGWTIKWQGETGNNLTG 129
Score = 75.8 bits (160), Expect(2) = 1e-026
Identities = 37/67 (55%), Positives = 41/67 (61%)
Frame = -3 / -1
Query: 567 SXLPEMRTTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYLSASTPLS 388
S P+ +TTHL PHT T GPG G+VRF LSP VSAYGGSPT T A S A S
Sbjct: 392 SGRPDTMSTTHLTSPHTSLITSGPGDGMVRFLLSPAVSAYGGSPTATTAYS*SLALLARS 213
Query: 387 GLSEYTT 367
LS +T
Sbjct: 212 SLSGRST 192
Score = 64.0 bits (134), Expect(2) = 1e-026
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -3 / -1
Query: 291 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGS 196
CH++V PPHWLPRS AWLPATRI AF GS
Sbjct: 101 CHLMVQPPHWLPRSWAWLPATRIFLAFLSSGS 6
Score = 35.2 bits (71), Expect(3) = 9e-044
Identities = 17/33 (51%), Positives = 18/33 (54%)
Frame = +2 / +1
Query: 308 TTAGTTILSGIEATVDPSTQVVYSESPDSGVLA 406
T GTTIL I+ VD T V Y E PD LA
Sbjct: 124 TGVGTTILEAIKKAVDKKTTVDYVERPDKDDLA 222
>gb|CF483805.1|CF483805 POL1_24_G05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_24_G05_A002 5', mRNA sequence
Length = 595
Score = 99.1 bits (211), Expect(3) = 8e-043
Identities = 44/58 (75%), Positives = 48/58 (82%)
Frame = +2 / +3
Query: 5 MSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGK 178
+ RI+DAV RILRVKFTMGLFE+P PD L ELG Q+HR LAREAVRKSLVLLKN K
Sbjct: 201 LDRINDAVSRILRVKFTMGLFEDPIPDPRLTKELGAQDHRALAREAVRKSLVLLKNKK 374
Score = 86.8 bits (184), Expect(3) = 8e-043
Identities = 34/55 (61%), Positives = 40/55 (72%)
Frame = +2 / +3
Query: 155 LVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAG 319
++L K P+LPL KKA KILVAGSHA+DLG+QCGGWTI WQG +GN G
Sbjct: 354 VLLKNKKKGQKDPMLPLDKKAKKILVAGSHAHDLGSQCGGWTIKWQGETGNNLTG 518
Score = 77.6 bits (164), Expect(3) = 4e-030
Identities = 34/56 (60%), Positives = 41/56 (73%)
Frame = -2 / -3
Query: 178 LAVLQENQGFPDGFARQFPVFLLPELAGEARVGVRVLEQAHGELDTKDPVDGVVDS 11
L VL+E++ DG R+ PV L EL GEARV RVLE+AHGELD +DP DGVVD+
Sbjct: 374 LLVLEEHERLADGLPRERPVVLRAELLGEARVRDRVLEEAHGELDPEDPADGVVDA 207
Score = 65.8 bits (138), Expect(3) = 4e-030
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -3 / -1
Query: 291 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA 187
CH++V PPHWLPRS AWLPATRI AF GS G+
Sbjct: 490 CHLMVQPPHWLPRSWAWLPATRIFLAFLSSGSIGS 386
Score = 28.4 bits (56), Expect(3) = 8e-043
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1 / +2
Query: 295 KQRQHYCRHDDPLRDRGHRGPQHAGGVLGEPG 390
+Q+ H RH DP + G + GG+ G PG
Sbjct: 500 RQQPHRRRHHDPGGHQEGGGQEDDGGLRGAPG 595
Score = 26.1 bits (51), Expect(3) = 4e-030
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2 / -3
Query: 388 RALRVHHLRAGVHGGLDPGEDRRAGSSVAAASL 290
RAL V H R VH LD +DR A + A L
Sbjct: 593 RALHVVHRRLLVHRLLDGLQDRGADAGEVVAGL 495
>gb|CW058681.1|CW058681 104_301_10518874_114_30160 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518874, DNA
sequence
Length = 547
Score = 141 bits (303), Expect(2) = 8e-042
Identities = 60/71 (84%), Positives = 64/71 (90%)
Frame = +2 / +1
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKS 181
P+SRIDDAV RILRVKFTMGLF+NPY D+SL GELGKQEHR+LAREAVRKSLVLLKNGK
Sbjct: 130 PLSRIDDAVRRILRVKFTMGLFDNPYADTSLVGELGKQEHRDLAREAVRKSLVLLKNGKP 309
Query: 182 SYAPLLPLPKK 214
PLLPLPKK
Sbjct: 310 GAKPLLPLPKK 342
Score = 105 bits (226), Expect(2) = 7e-032
Identities = 49/71 (69%), Positives = 51/71 (71%)
Frame = -3 / -3
Query: 213 FFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARLESG*GFSNRPMVNLTRRI 34
F G GS+G LPF RRTRD TASRA SRCSC PSSP RL S *G S RPMVNLTRR+
Sbjct: 341 FLGSGSSGLAPGLPFLRRTRDLRTASRARSRCSCLPSSPTRLVSA*GLSKRPMVNLTRRM 162
Query: 33 L*TASSILLMG 1
TASSI L G
Sbjct: 161 RRTASSIRLNG 129
Score = 51.6 bits (107), Expect(2) = 8e-042
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +2 / +1
Query: 296 SSGNTTAGTTILSGIEATVDPSTQVVYSESPDSG 397
+ N TAGTTIL GI+ V P T VVYSE+PD+G
Sbjct: 436 TGNNLTAGTTILDGIKRAVVPGTDVVYSENPDAG 537
Score = 51.6 bits (107), Expect(2) = 7e-032
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -3 / -3
Query: 291 CHVIVHPPHWLPRSLAWLPATRIL 220
C V+V PPHWLPRS WLPATR L
Sbjct: 428 CQVMVQPPHWLPRSSPWLPATRTL 357
>gb|CW393711.1|CW393711 fsbb001f080o11f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f080o11, DNA
sequence
Length = 508
Score = 99.1 bits (211), Expect(2) = 9e-040
Identities = 44/58 (75%), Positives = 48/58 (82%)
Frame = +2 / +3
Query: 5 MSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGK 178
+ RI+DAV RILRVKFTMGLFE+P PD L ELG Q+HR LAREAVRKSLVLLKN K
Sbjct: 81 LDRINDAVSRILRVKFTMGLFEDPIPDPRLTKELGAQDHRALAREAVRKSLVLLKNKK 254
Score = 86.8 bits (184), Expect(2) = 9e-040
Identities = 34/55 (61%), Positives = 40/55 (72%)
Frame = +2 / +3
Query: 155 LVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAG 319
++L K P+LPL KKA KILVAGSHA+DLG+QCGGWTI WQG +GN G
Sbjct: 234 VLLKNKKKGQKDPMLPLDKKAKKILVAGSHAHDLGSQCGGWTIKWQGETGNNLTG 398
Score = 77.6 bits (164), Expect(2) = 1e-027
Identities = 34/56 (60%), Positives = 41/56 (73%)
Frame = -2 / -3
Query: 178 LAVLQENQGFPDGFARQFPVFLLPELAGEARVGVRVLEQAHGELDTKDPVDGVVDS 11
L VL+E++ DG R+ PV L EL GEARV RVLE+AHGELD +DP DGVVD+
Sbjct: 254 LLVLEEHERLADGLPRERPVVLRAELLGEARVRDRVLEEAHGELDPEDPADGVVDA 87
Score = 65.8 bits (138), Expect(2) = 1e-027
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -3 / -1
Query: 291 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA 187
CH++V PPHWLPRS AWLPATRI AF GS G+
Sbjct: 370 CHLMVQPPHWLPRSWAWLPATRIFLAFLSSGSIGS 266
>gb|CN145015.1|CN145015 WOUND1_26_F10.b2_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_26_F10_A002 3', mRNA sequence
Length = 759
Score = 95.4 bits (203), Expect(2) = 1e-039
Identities = 35/54 (64%), Positives = 44/54 (81%)
Frame = +2 / +2
Query: 233 AGSHANDLGNQCGGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSESPDS 394
AGSHA++LG QCGGWTI WQG +G T GTTIL ++A VDPST VV++E+PD+
Sbjct: 2 AGSHADNLGYQCGGWTIEWQGDTGRITVGTTILDAVKAAVDPSTTVVFAENPDA 163
Score = 89.9 bits (191), Expect(2) = 1e-039
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2 / +2
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VLISGR +V++
Sbjct: 185 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGAVRCATVLISGRPVVIQ 349
Score = 75.8 bits (160), Expect(2) = 5e-026
Identities = 31/50 (62%), Positives = 34/50 (68%)
Frame = -3 / -1
Query: 570 TSXLPEMRTTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA 421
T+ P M T H PHT W LGPG+GIVRFRLSP VS YG SPT T+A
Sbjct: 342 TTGRPLMSTVAHRTAPHTVWTVLGPGSGIVRFRLSPLVSVYGCSPTATMA 193
Score = 62.1 bits (130), Expect(2) = 5e-026
Identities = 29/53 (54%), Positives = 29/53 (54%)
Frame = -3 / -1
Query: 390 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPA 232
SG S TT V GST A RI PCH IVHPPHW PR AWLPA
Sbjct: 159 SGFSANTTVVDGSTAAFTASRIVVPTVMRPVSPCHSIVHPPHW*PRLSAWLPA 1
>gb|AW923989.1|AW923989 WS1_32_F04.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 269
Score = 162 bits (350), Expect = 8e-039
Identities = 67/86 (77%), Positives = 73/86 (84%)
Frame = +2 / +1
Query: 107 GKQEHRELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTIT 286
GKQEHR+LAREAVRKSLVLLKNGK APLLPLPKKA KILVAGSHA++LG QCGGWTI
Sbjct: 10 GKQEHRDLAREAVRKSLVLLKNGKPGDAPLLPLPKKAAKILVAGSHADNLGYQCGGWTIE 189
Query: 287 WQGSSGNTTAGTTILSGIEATVDPST 364
WQG +G T GTTIL ++A VDPST
Sbjct: 190 WQGDTGRITVGTTILDAVKAAVDPST 267
Score = 122 bits (262), Expect = 3e-027
Identities = 54/84 (64%), Positives = 55/84 (65%)
Frame = -3 / -1
Query: 357 GSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*ED 178
GST A RI PCH IVHPPHW PR AWLPATRIL AF GRGS+GA
Sbjct: 260 GSTAAFTASRIVVPTVMRPVSPCHSIVHPPHW*PRLSAWLPATRILAAFLGRGSSGASPG 81
Query: 177 LPFFRRTRDFLTASRASSRCSCFP 106
LPF R T DFLTASRA S CSCFP
Sbjct: 80 LPFLRSTSDFLTASRARSLCSCFP 9
>gb|CW302461.1|CW302461 104_786_11464731_116_35664_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464731, DNA
sequence
Length = 509
Score = 111 bits (238), Expect(2) = 1e-038
Identities = 44/56 (78%), Positives = 50/56 (89%)
Frame = +2 / -3
Query: 410 KYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
++DYAIVVVGEPPYAET GDNLNLTIPAPGP V ++VCG +CVVVL+SGR LVVE
Sbjct: 267 RFDYAIVVVGEPPYAETHGDNLNLTIPAPGPDVIRNVCGSIRCVVVLVSGRPLVVE 100
Score = 86.8 bits (184), Expect(2) = 8e-026
Identities = 40/54 (74%), Positives = 42/54 (77%)
Frame = -3 / +2
Query: 576 STTSXLPEMRTTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA*S 415
STTS PE TTTHL PHT T GPGAG+VRFRLSP VSA GGSPTTT+A*S
Sbjct: 101 STTSGRPETSTTTHLMLPHTFRMTSGPGAGMVRFRLSPCVSA*GGSPTTTMA*S 262
Score = 70.3 bits (148), Expect(2) = 1e-038
Identities = 26/47 (55%), Positives = 31/47 (65%)
Frame = +2 / -3
Query: 191 PLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAGTTIL 331
PL P +LVAGSH +DLG+QCGGWTITWQG +GN T +
Sbjct: 498 PLPKKPSYGRSVLVAGSHGDDLGSQCGGWTITWQGQTGNNLTAGTTI 358
Score = 51.6 bits (107), Expect(2) = 8e-026
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -3 / +2
Query: 291 CHVIVHPPHWLPRSLAWLPATRIL 220
C V+V PPHWLPRS WLPATR L
Sbjct: 398 CQVMVQPPHWLPRSSPWLPATRTL 469
>gb|CF429365.1|CF429365 PH1_21_E06.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_21_E06_A002 3', mRNA sequence
Length = 691
Score = 161 bits (348), Expect = 2e-038
Identities = 69/104 (66%), Positives = 78/104 (75%)
Frame = +2 / +1
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKS 181
PMSRIDDAV RILRVKF G+FE+P+ D SL +G +EHR L REAVRKSLVLLKNGK
Sbjct: 55 PMSRIDDAVERILRVKFISGVFEHPFSDQSLLDIVGCKEHRLLGREAVRKSLVLLKNGKD 234
Query: 182 SYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTT 313
LPL K A +ILVAG+HA+D+G QCGGWTI W G SG T
Sbjct: 235 RKVSFLPLAKDAKRILVAGTHADDIGYQCGGWTIAWHGDSGKIT 366
Score = 103 bits (220), Expect = 2e-021
Identities = 52/97 (53%), Positives = 59/97 (60%)
Frame = -3 / -3
Query: 291 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSC 112
CH IVHPPH P S A +PAT IL A G N LPFFR T+D TASR S+RCS
Sbjct: 344 CHAIVHPPH*YPISSACVPATSILFASLANGRNDTFRSLPFFRSTKDLRTASRPSNRCSL 165
Query: 111 FPSSPARLESG*GFSNRPMVNLTRRIL*TASSILLMG 1
P+ +R S G SN P +NLT RI TASSI +G
Sbjct: 164 QPTMSSRDWSENGCSNTPEMNLTLRIRSTASSIRDIG 54
>gb|BZ368104.1|BZ368104 id11d06.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id11d06 5', DNA sequence
Length = 494
Score = 161 bits (347), Expect = 2e-038
Identities = 71/82 (86%), Positives = 73/82 (89%)
Frame = +2 / +1
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKS 181
PMSRIDDAV RILRVKFTMGLFENP PD SLA +LGKQEHR+LARE VRKSLVLLKNGK
Sbjct: 247 PMSRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLARERVRKSLVLLKNGKP 426
Query: 182 SYAPLLPLPKKAGKILVAGSHA 247
APLLPLPKKA KILVAGSHA
Sbjct: 427 GDAPLLPLPKKAAKILVAGSHA 492
Score = 140 bits (302), Expect = 1e-032
Identities = 64/82 (78%), Positives = 66/82 (80%)
Frame = -3 / -1
Query: 246 AWLPATRILPAFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARLESG*GFS 67
AWLPATRIL AF GRGS+GA LPF R T DFLT SRA S CSCFPS ARL SG GFS
Sbjct: 491 AWLPATRILAAFLGRGSSGASPGLPFLRSTSDFLTRSRARSLCSCFPSWSARLGSGMGFS 312
Query: 66 NRPMVNLTRRIL*TASSILLMG 1
NRPMVNLTRRIL TASSILL+G
Sbjct: 311 NRPMVNLTRRILVTASSILLIG 246
>gb|CD206527.1|CD206527 HS1_23_G12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_23_G12_A012 3', mRNA sequence
Length = 735
Score = 89.9 bits (191), Expect(2) = 9e-038
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2 / +3
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VLISGR +V++
Sbjct: 177 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGAVRCATVLISGRPVVIQ 341
Score = 89.0 bits (189), Expect(2) = 9e-038
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = +2 / +3
Query: 242 HANDLGNQCGGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSESPDS 394
HA++LG QCGGWTI WQG +G T GTTIL ++A VDPST VV++E+PD+
Sbjct: 3 HADNLGYQCGGWTIEWQGDTGRITVGTTILDAVKAAVDPSTTVVFAENPDA 155
Score = 75.8 bits (160), Expect(2) = 5e-024
Identities = 31/50 (62%), Positives = 34/50 (68%)
Frame = -3 / -3
Query: 570 TSXLPEMRTTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA 421
T+ P M T H PHT W LGPG+GIVRFRLSP VS YG SPT T+A
Sbjct: 334 TTGRPLMSTVAHRTAPHTVWTVLGPGSGIVRFRLSPLVSVYGCSPTATMA 185
Score = 55.3 bits (115), Expect(2) = 5e-024
Identities = 26/50 (52%), Positives = 26/50 (52%)
Frame = -3 / -3
Query: 390 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAW 241
SG S TT V GST A RI PCH IVHPPHW PR AW
Sbjct: 151 SGFSANTTVVDGSTAAFTASRIVVPTVMRPVSPCHSIVHPPHW*PRLSAW 2
>gb|BF705329.1|BF705329 RHIZ2_3_F09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 614
Score = 156 bits (336), Expect = 7e-037
Identities = 66/73 (90%), Positives = 67/73 (91%)
Frame = +2 / +1
Query: 359 STQVVYSESPDSGVLADKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKC 538
STQVVYSE+PDSGVL DKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSV QSVC KC
Sbjct: 1 STQVVYSENPDSGVLGDKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCKATKC 180
Query: 539 VVVLISGRXLVVE 577
VVVLISGR LVVE
Sbjct: 181 VVVLISGRPLVVE 219
Score = 149 bits (321), Expect = 2e-035
Identities = 63/72 (87%), Positives = 63/72 (87%)
Frame = -3 / -1
Query: 576 STTSXLPEMRTTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYLSAST 397
STT LPEM TTTHL HTDW TLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYLS ST
Sbjct: 218 STTRGLPEMSTTTHLVALHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYLSPST 39
Query: 396 PLSGLSEYTTCV 361
PLSG SEYTTCV
Sbjct: 38 PLSGFSEYTTCV 3
Score = 110 bits (235), Expect = 2e-023
Identities = 50/73 (68%), Positives = 52/73 (71%)
Frame = -2 / -3
Query: 577 LHHQXPAGDEDHNALGXSAHXXXXXXXXXXXRQVQVVAERLRVWRLPDHHDRVVVLVGQH 398
LHHQ P GDE H+ALG AH RQVQVVAERLRV RL HHDRVVVLV +H
Sbjct: 219 LHHQGPPGDEHHHALGRLAHRLDHARPGRRDRQVQVVAERLRVRRLTHHHDRVVVLVAEH 40
Query: 397 AAVRALRVHHLRA 359
AAVR LRVHHLRA
Sbjct: 39 AAVRVLRVHHLRA 1
>gb|CX617837.1|CX617837 GABR1_36_C12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_36_C12_A002 3', mRNA sequence
Length = 743
Score = 89.9 bits (191), Expect(2) = 4e-036
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2 / +2
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VLISGR +V++
Sbjct: 170 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGAVRCATVLISGRPVVIQ 334
Score = 83.6 bits (177), Expect(2) = 4e-036
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = +2 / +2
Query: 248 NDLGNQCGGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSESPDS 394
++LG QCGGWTI WQG +G T GTTIL ++A VDPST VV++E+PD+
Sbjct: 2 DNLGYQCGGWTIEWQGDTGRITVGTTILDAVKAAVDPSTTVVFAENPDA 148
Score = 75.8 bits (160), Expect(2) = 2e-022
Identities = 31/50 (62%), Positives = 34/50 (68%)
Frame = -3 / -3
Query: 570 TSXLPEMRTTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA 421
T+ P M T H PHT W LGPG+GIVRFRLSP VS YG SPT T+A
Sbjct: 327 TTGRPLMSTVAHRTAPHTVWTVLGPGSGIVRFRLSPLVSVYGCSPTATMA 178
Score = 50.3 bits (104), Expect(2) = 2e-022
Identities = 24/46 (52%), Positives = 24/46 (52%)
Frame = -3 / -3
Query: 390 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPR 253
SG S TT V GST A RI PCH IVHPPHW PR
Sbjct: 144 SGFSANTTVVDGSTAAFTASRIVVPTVMRPVSPCHSIVHPPHW*PR 7
>gb|CD226009.1|CD226009 CCC1_42_G09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_42_G09_A007 5', mRNA sequence
Length = 649
Score = 152 bits (328), Expect = 8e-036
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = +2 / +1
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKS 181
PMSRIDDAVYRILRVKFTMGLFENPYPD+SLAGE+GKQEHRELAREAVRKSLV LKNGKS
Sbjct: 442 PMSRIDDAVYRILRVKFTMGLFENPYPDASLAGEIGKQEHRELAREAVRKSLVPLKNGKS 621
Query: 182 SYAPLLPLP 208
S APLLPLP
Sbjct: 622 SSAPLLPLP 648
Score = 140 bits (302), Expect = 1e-032
Identities = 62/69 (89%), Positives = 63/69 (91%)
Frame = -3 / -3
Query: 207 GRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARLESG*GFSNRPMVNLTRRIL* 28
GRGS GA ED PFFR TRDFLTASRA+SRCSCFP SPARL SG*GFSNRPMVNLTRRIL*
Sbjct: 647 GRGSKGAEEDFPFFRGTRDFLTASRANSRCSCFPISPARLASG*GFSNRPMVNLTRRIL* 468
Query: 27 TASSILLMG 1
TASSILLMG
Sbjct: 467 TASSILLMG 441
Score = 122 bits (263), Expect = 2e-027
Identities = 50/69 (72%), Positives = 56/69 (81%)
Frame = -2 / -2
Query: 208 REGQQRSVGGLAVLQENQGFPDGFARQFPVFLLPELAGEARVGVRVLEQAHGELDTKDPV 29
REGQQ S GG VLQ NQG PDGFA Q PVFLLP+ G+A +GVRVL+ HGELDT+DPV
Sbjct: 648 REGQQGSRGGFPVLQRNQGLPDGFACQLPVFLLPDFTGKASIGVRVLK*THGELDTEDPV 469
Query: 28 DGVVDSAHG 2
DG+VDSAHG
Sbjct: 468 DGIVDSAHG 442
Score = 120 bits (259), Expect = 9e-027
Identities = 49/66 (74%), Positives = 52/66 (78%)
Frame = +3 / +2
Query: 3 P*AESTTPSTGSFVSSSPWACSRTLTPTLASPASSGSKNTGNWRAKPSGNPWFS*RTASP 182
P*AEST PSTGS VSSSPW RTLTP LA P SGSKNTG+W AKPSG+PWF *RT +P
Sbjct: 443 P*AESTMPSTGSSVSSSPWVYLRTLTPMLALPVKSGSKNTGSWHAKPSGSPWFL*RTGNP 622
Query: 183 PTLRCC 200
P L CC
Sbjct: 623 PLLPCC 640
>gb|CW066393.1|CW066393 104_313_10523660_114_30148 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10523660, DNA
sequence
Length = 463
Score = 142 bits (306), Expect = 8e-033
Identities = 61/71 (85%), Positives = 64/71 (90%)
Frame = +2 / +2
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKS 181
PMSRIDDAV RILRVKFTMGLF+NPY D+SL GELGKQEHR+LAREAVRKSLVLLKNGK
Sbjct: 227 PMSRIDDAVRRILRVKFTMGLFDNPYADTSLVGELGKQEHRDLAREAVRKSLVLLKNGKP 406
Query: 182 SYAPLLPLPKK 214
PLLPLPKK
Sbjct: 407 GAKPLLPLPKK 439
Score = 105 bits (226), Expect = 3e-022
Identities = 48/72 (66%), Positives = 53/72 (73%)
Frame = -3 / -2
Query: 216 AFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARLESG*GFSNRPMVNLTRR 37
+F G GS+G LPF RRTRD TASRA SRCSC PSSP RL S *G S RPMVNLTRR
Sbjct: 441 SFLGSGSSGFAPGLPFLRRTRDLRTASRARSRCSCLPSSPTRLVSA*GLSKRPMVNLTRR 262
Query: 36 IL*TASSILLMG 1
+ TASS+ L+G
Sbjct: 261 MRRTASSMRLIG 226
>gb|BE365282.1|BE365282 PI1_26_C04.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 432
Score = 138 bits (298), Expect = 1e-031
Identities = 61/71 (85%), Positives = 63/71 (88%)
Frame = +2 / +3
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKS 181
PMSRIDDAV RILRVKFTMGLFENP PD SLA +LGKQEHR+LAREAVRKS VLLKNGK
Sbjct: 219 PMSRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLAREAVRKSHVLLKNGKP 398
Query: 182 SYAPLLPLPKK 214
APLLPLPKK
Sbjct: 399 GDAPLLPLPKK 431
Score = 118 bits (254), Expect = 4e-026
Identities = 55/71 (77%), Positives = 57/71 (80%)
Frame = -3 / -3
Query: 213 FFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARLESG*GFSNRPMVNLTRRI 34
F GRGS+GA LPF R T DFLTASRA S CSCFPS ARL SG GFSNRPMVNLTRRI
Sbjct: 430 FLGRGSSGASPGLPFLRSTCDFLTASRARSLCSCFPSWSARLGSGMGFSNRPMVNLTRRI 251
Query: 33 L*TASSILLMG 1
L TASSILL+G
Sbjct: 250 LVTASSILLIG 218
>gb|AW678076.1|AW678076 WS1_13_D08.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 461
Score = 137 bits (295), Expect = 3e-031
Identities = 60/69 (86%), Positives = 62/69 (89%)
Frame = +2 / +3
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKS 181
PMSRIDDAV RILRVKFTMGLFENP PD SLA +LGKQEHR+LAREAVRKSLVLLKNGK
Sbjct: 255 PMSRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLAREAVRKSLVLLKNGKP 434
Query: 182 SYAPLLPLP 208
APLLPLP
Sbjct: 435 GDAPLLPLP 461
Score = 116 bits (250), Expect = 2e-025
Identities = 54/69 (78%), Positives = 56/69 (81%)
Frame = -3 / -2
Query: 207 GRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARLESG*GFSNRPMVNLTRRIL* 28
GRGS+GA LPF R T DFLTASRA S CSCFPS ARL SG GFSNRPMVNLTRRIL
Sbjct: 460 GRGSSGASPGLPFLRSTSDFLTASRARSLCSCFPSWSARLGSGMGFSNRPMVNLTRRILV 281
Query: 27 TASSILLMG 1
TASSILL+G
Sbjct: 280 TASSILLIG 254
>gb|CW414214.1|CW414214 fsbb001f113l24f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f113l24, DNA
sequence
Length = 332
Score = 128 bits (276), Expect(2) = 4e-029
Identities = 57/71 (80%), Positives = 61/71 (85%)
Frame = +2 / +2
Query: 2 PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKS 181
PMSRIDDAV RILRVKFTMGLFENP PD SLA +LGKQEHR+LAREA KSLVLLKNGK
Sbjct: 101 PMSRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLAREAGMKSLVLLKNGKP 280
Query: 182 SYAPLLPLPKK 214
APLLPL ++
Sbjct: 281 GDAPLLPLAQE 313
Score = 110 bits (237), Expect(2) = 9e-024
Identities = 51/70 (72%), Positives = 55/70 (78%)
Frame = -3 / -3
Query: 210 FGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARLESG*GFSNRPMVNLTRRIL 31
+ RGS+GA LPF R T DF+ ASRA S CSCFPS ARL SG GFSNRPMVNLTRRIL
Sbjct: 309 WARGSSGASPGLPFLRSTSDFIPASRARSLCSCFPSWSARLGSGMGFSNRPMVNLTRRIL 130
Query: 30 *TASSILLMG 1
TASSILL+G
Sbjct: 129 VTASSILLIG 100
Score = 20.6 bits (39), Expect(2) = 4e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2 / +3
Query: 200 PLPKKAGKILV 232
P PKK KILV
Sbjct: 300 PWPKKGAKILV 332
Score = 18.8 bits (35), Expect(2) = 9e-024
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3 / -2
Query: 231 TRILPAFFGRG 199
TRIL F G+G
Sbjct: 331 TRILAPFLGQG 299
>gb|CW066394.1|CW066394 104_313_10523660_115_30149 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10523660, DNA
sequence
Length = 441
Score = 115 bits (246), Expect(2) = 5e-028
Identities = 44/56 (78%), Positives = 51/56 (91%)
Frame = +2 / -1
Query: 410 KYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
++DYA+VVVGEPPYAETFGDNLNLTIPAPGP + ++VCG KCVVVL+SGR LVVE
Sbjct: 354 RFDYAVVVVGEPPYAETFGDNLNLTIPAPGPDIIRNVCGSIKCVVVLVSGRPLVVE 187
Score = 31.1 bits (62), Expect(2) = 5e-028
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / -1
Query: 335 GIEATVDPSTQVVYSESPDSG 397
GI V P VVYSE+PD+G
Sbjct: 438 GIRRAVAPGRDVVYSENPDAG 376
>gb|BE361409.1|BE361409 DG1_71_B07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 651
Score = 85.4 bits (181), Expect(2) = 9e-028
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = +2 / +3
Query: 215 AGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSESPDS 394
A +ILV G+HA+D+G QCGGWTI W G SG T GT+IL I+ +V T+VVY + P
Sbjct: 6 AKRILVPGTHADDIGYQCGGWTIAWHGDSGKITPGTSILEAIQESVGVQTEVVYEKCPTE 185
Query: 395 GVL 403
++
Sbjct: 186 TII 194
Score = 59.9 bits (125), Expect(2) = 9e-028
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +2 / +3
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YA+VVVGE PYAE GD +L+IP G + V +V++ISGR L++E
Sbjct: 207 FSYAVVVVGEVPYAEWTGDRTDLSIPFNGSDLITCVASKIPTLVIVISGRPLIIE 371
>gb|CD225901.1|CD225901 CCC1_42_G09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_42_G09_A007 3', mRNA sequence
Length = 629
Score = 124 bits (266), Expect = 2e-027
Identities = 52/57 (91%), Positives = 52/57 (91%)
Frame = +2 / +3
Query: 407 DKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
DKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSV QSVC KCVVVLISGR LVVE
Sbjct: 3 DKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCKATKCVVVLISGRPLVVE 173
Score = 118 bits (253), Expect = 6e-026
Identities = 50/57 (87%), Positives = 50/57 (87%)
Frame = -3 / -2
Query: 576 STTSXLPEMRTTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYLS 406
STT LPEM TTTHL HTDW TLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYLS
Sbjct: 172 STTRGLPEMSTTTHLVALHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYLS 2
>gb|CD203987.1|CD203987 HS1_3_A09.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_3_A09_A012 3', mRNA sequence
Length = 688
Score = 121 bits (260), Expect = 2e-026
Identities = 51/56 (91%), Positives = 51/56 (91%)
Frame = +2 / +3
Query: 410 KYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
KYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSV QSVC KCVVVLISGR LVVE
Sbjct: 3 KYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCKATKCVVVLISGRPLVVE 170
Score = 116 bits (249), Expect = 2e-025
Identities = 49/56 (87%), Positives = 49/56 (87%)
Frame = -3 / -1
Query: 576 STTSXLPEMRTTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYL 409
STT LPEM TTTHL HTDW TLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYL
Sbjct: 169 STTRGLPEMSTTTHLVALHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTIA*SYL 2
>gb|BE594012.1|BE594012 WS1_101_B06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 486
Score = 89.9 bits (191), Expect(2) = 6e-025
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2 / +3
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VLISGR +V++
Sbjct: 108 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGAVRCATVLISGRPVVIQ 272
Score = 45.7 bits (94), Expect(2) = 6e-025
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = +2 / +3
Query: 311 TAGTTILSGIEATVDPSTQVVYSESPDS 394
T GTTIL ++A VDPST VV++E+PD+
Sbjct: 3 TVGTTILDAVKAAVDPSTTVVFAENPDA 86
>gb|CW328842.1|CW328842 104_825_11479522_148_36001_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479522, DNA
sequence
Length = 448
Score = 110 bits (235), Expect = 4e-023
Identities = 47/52 (90%), Positives = 47/52 (90%)
Frame = +2 / +1
Query: 422 AIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
AIVVVGEPPYAETFGDNLNLTIPAPGPSV QSVC KCVVVLISGR LVVE
Sbjct: 1 AIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCKATKCVVVLISGRPLVVE 156
Score = 107 bits (229), Expect = 1e-022
Identities = 44/51 (86%), Positives = 44/51 (86%)
Frame = -3 / -3
Query: 576 STTSXLPEMRTTTHLAXPHTDWXTLGPGAGIVRFRLSPNVSAYGGSPTTTI 424
STT LPEM TTTHL HTDW TLGPGAGIVRFRLSPNVSAYGGSPTTTI
Sbjct: 155 STTRGLPEMSTTTHLVALHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTI 3
>gb|CD427685.1|CD427685 SA1_38_F06.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_38_F06_A002 3', mRNA sequence
Length = 667
Score = 89.9 bits (191), Expect(2) = 4e-022
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2 / +2
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VLISGR +V++
Sbjct: 92 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGAVRCATVLISGRPVVIQ 256
Score = 36.1 bits (73), Expect(2) = 4e-022
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2 / +2
Query: 326 ILSGIEATVDPSTQVVYSESPDS 394
IL ++A VDPST VV++E+PD+
Sbjct: 2 ILDAVKAAVDPSTTVVFAENPDA 70
>gb|BE593778.1|BE593778 WS1_102_B02.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 636
Score = 89.9 bits (191), Expect(2) = 4e-022
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2 / +1
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VLISGR +V++
Sbjct: 91 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGAVRCATVLISGRPVVIQ 255
Score = 36.1 bits (73), Expect(2) = 4e-022
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2 / +1
Query: 326 ILSGIEATVDPSTQVVYSESPDS 394
IL ++A VDPST VV++E+PD+
Sbjct: 1 ILDAVKAAVDPSTTVVFAENPDA 69
>gb|CD210700.1|CD210700 HS1_49_D04.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_49_D04_A012 3', mRNA sequence
Length = 664
Score = 89.9 bits (191), Expect(2) = 1e-021
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2 / +2
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VLISGR +V++
Sbjct: 89 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGAVRCATVLISGRPVVIQ 253
Score = 34.3 bits (69), Expect(2) = 1e-021
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +2 / +2
Query: 329 LSGIEATVDPSTQVVYSESPDS 394
L ++A VDPST VV++E+PD+
Sbjct: 2 LDAVKAAVDPSTTVVFAENPDA 67
>gb|CD203868.1|CD203868 HS1_2_D11.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_2_D11_A012 3', mRNA sequence
Length = 663
Score = 89.9 bits (191), Expect(2) = 1e-021
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2 / +2
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VLISGR +V++
Sbjct: 89 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGAVRCATVLISGRPVVIQ 253
Score = 34.3 bits (69), Expect(2) = 1e-021
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +2 / +2
Query: 329 LSGIEATVDPSTQVVYSESPDS 394
L ++A VDPST VV++E+PD+
Sbjct: 2 LDAVKAAVDPSTTVVFAENPDA 67
>gb|CD426067.1|CD426067 SA1_16_H05.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_16_H05_A002 3', mRNA sequence
Length = 663
Score = 89.9 bits (191), Expect(2) = 1e-021
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2 / +2
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VLISGR +V++
Sbjct: 89 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGAVRCATVLISGRPVVIQ 253
Score = 34.3 bits (69), Expect(2) = 1e-021
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +2 / +2
Query: 329 LSGIEATVDPSTQVVYSESPDS 394
L ++A VDPST VV++E+PD+
Sbjct: 2 LDAVKAAVDPSTTVVFAENPDA 67
>gb|CD208631.1|CD208631 HS1_39_H06.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_39_H06_A012 3', mRNA sequence
Length = 658
Score = 89.9 bits (191), Expect(2) = 1e-021
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2 / +2
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VLISGR +V++
Sbjct: 89 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGAVRCATVLISGRPVVIQ 253
Score = 34.3 bits (69), Expect(2) = 1e-021
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +2 / +2
Query: 329 LSGIEATVDPSTQVVYSESPDS 394
L ++A VDPST VV++E+PD+
Sbjct: 2 LDAVKAAVDPSTTVVFAENPDA 67
>gb|CD210830.1|CD210830 HS1_66_D06.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_66_D06_A012 3', mRNA sequence
Length = 641
Score = 89.9 bits (191), Expect(2) = 2e-021
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2 / +2
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VLISGR +V++
Sbjct: 89 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGAVRCATVLISGRPVVIQ 253
Score = 33.9 bits (68), Expect(2) = 2e-021
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +2 / +2
Query: 329 LSGIEATVDPSTQVVYSESPDS 394
L ++A VDPST VV++E+PD+
Sbjct: 2 LDAVKAPVDPSTTVVFAENPDA 67
>gb|CD208473.1|CD208473 HS1_38_B09.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_38_B09_A012 3', mRNA sequence
Length = 655
Score = 89.9 bits (191), Expect(2) = 5e-021
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2 / +2
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VLISGR +V++
Sbjct: 80 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGAVRCATVLISGRPVVIQ 244
Score = 32.5 bits (65), Expect(2) = 5e-021
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +2 / +2
Query: 338 IEATVDPSTQVVYSESPDS 394
++A VDPST VV++E+PD+
Sbjct: 2 VKAAVDPSTTVVFAENPDA 58
>gb|CD213892.1|CD213892 HS1_69_F11.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_69_F11_A012 3', mRNA sequence
Length = 655
Score = 89.9 bits (191), Expect(2) = 5e-021
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2 / +2
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VLISGR +V++
Sbjct: 80 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGAVRCATVLISGRPVVIQ 244
Score = 32.5 bits (65), Expect(2) = 5e-021
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +2 / +2
Query: 338 IEATVDPSTQVVYSESPDS 394
++A VDPST VV++E+PD+
Sbjct: 2 VKAAVDPSTTVVFAENPDA 58
>gb|CD424420.1|CD424420 SA1_5_D06.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_5_D06_A002 3', mRNA sequence
Length = 654
Score = 89.9 bits (191), Expect(2) = 5e-021
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2 / +2
Query: 413 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVXQSVCGXAKCVVVLISGRXLVVE 577
+ YAIV VGE PY ET GD+LNLTIP PGPS Q+VCG +C VLISGR +V++
Sbjct: 80 FSYAIVAVGEHPYTETKGDSLNLTIPDPGPSTVQTVCGAVRCATVLISGRPVVIQ 244
Score = 32.5 bits (65), Expect(2) = 5e-021
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +2 / +2
Query: 338 IEATVDPSTQVVYSESPDS 394
++A VDPST VV++E+PD+
Sbjct: 2 VKAAVDPSTTVVFAENPDA 58
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.316 0.137 0.438
Matrix: BLOSUM62
Number of Hits to DB: 579,936,362
Number of Sequences: 832831
Number of extensions: 8074249
Number of successful extensions: 138824
Number of sequences better than 1.0e-020: 59
length of database: 163,786,556
effective HSP length: 49
effective length of database: 122,977,837
effective search space used: 17585830691
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.6 bits)