TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750927.2.1
(1331 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG048737.1|BG048737 OV1_22_D05.b1_A002 Ovary 1 (OV1) Sor... 286 7e-076
gb|BG049032.1|BG049032 OV1_22_D05.g1_A002 Ovary 1 (OV1) Sor... 218 3e-070
gb|U49734.1|SBU49734 Sorghum bicolor MADS box transcription... 131 8e-055
gb|AY827471.1| Sorghum bicolor MADS box transcription facto... 208 2e-052
gb|CF480443.1|CF480443 POL1_65_G02.g1_A002 Pollen Sorghum b... 120 2e-051
gb|BE918053.1|BE918053 OV1_1_C11.b1_A002 Ovary 1 (OV1) Sorg... 133 1e-050
gb|BE918762.1|BE918762 OV1_4_F11.b1_A002 Ovary 1 (OV1) Sorg... 133 6e-050
gb|CD233526.1|CD233526 SS1_2_G04.g1_A012 Salt-stressed seed... 120 2e-048
gb|CD431694.1|CD431694 ETH1_10_G05.g1_A002 Ethylene-treated... 120 3e-048
gb|AY597522.1| Sorghum bicolor leafy hull sterile 1 (LHS1) ... 103 1e-046
gb|U32110.1|SBU32110 Sorghum bicolor putative MADS box prot... 109 2e-046
gb|CD463019.1|CD463019 ETH1_41_H12.g1_A002 Ethylene-treated... 108 9e-041
gb|BG412085.1|BG412085 OV2_37_G09.b1_A002 Ovary 2 (OV2) Sor... 130 1e-038
gb|BG357222.1|BG357222 OV2_11_C11.b1_A002 Ovary 2 (OV2) Sor... 133 4e-038
gb|BG357245.1|BG357245 OV2_11_F01.b1_A002 Ovary 2 (OV2) Sor... 122 1e-037
gb|BE918857.1|BE918857 FM1_1_A12.b1_A003 Floral-Induced Mer... 132 4e-037
gb|BF657168.1|BF657168 OV2_21_E10.b1_A002 Ovary 2 (OV2) Sor... 132 4e-037
gb|BF657741.1|BF657741 OV2_17_D12.b1_A002 Ovary 2 (OV2) Sor... 132 8e-037
gb|BE918862.1|BE918862 FM1_1_B06.b1_A003 Floral-Induced Mer... 132 5e-036
gb|CN135385.1|CN135385 OX1_32_B05.g1_A002 Oxidatively-stres... 101 1e-034
gb|CN132026.1|CN132026 OX1_3_D10.g1_A002 Oxidatively-stress... 102 5e-033
gb|BG240232.1|BG240232 OV1_19_E04.b1_A002 Ovary 1 (OV1) Sor... 82 1e-032
gb|CN129656.1|CN129656 RHOH1_36_D08.g1_A002 Acid- and alkal... 102 3e-032
gb|CN134777.1|CN134777 OX1_28_A03.g1_A002 Oxidatively-stres... 102 3e-032
gb|CN132011.1|CN132011 OX1_3_C05.g1_A002 Oxidatively-stress... 102 3e-032
gb|CF431741.1|CF431741 NIT1_10_D03.g1_A002 Nitrogen-deficie... 118 3e-032
gb|BM323459.1|BM323459 PIC1_19_E07.b1_A002 Pathogen-infecte... 139 7e-032
gb|BI098309.1|BI098309 IP1_30_G10.b1_A002 Immature pannicle... 131 3e-031
gb|BG948060.1|BG948060 IP1_8_H04.b1_A002 Immature pannicle ... 131 3e-031
gb|CW380917.1|CW380917 fsbb001f062a07k0 Sorghum methylation... 136 6e-031
gb|CN135407.1|CN135407 OX1_32_D03.g1_A002 Oxidatively-stres... 102 3e-030
gb|CW034003.1|CW034003 104_263_10502289_114_30359 Sorghum m... 133 8e-030
gb|CW034004.1|CW034004 104_263_10502289_115_30360 Sorghum m... 133 8e-030
gb|BE596704.1|BE596704 PI1_58_F04.b1_A002 Pathogen induced ... 133 8e-030
gb|BG054385.1|BG054385 OV2_3_G06.b1_A002 Ovary 2 (OV2) Sorg... 133 8e-030
gb|BF317935.1|BF317935 OV1_9_F09.b1_A002 Ovary 1 (OV1) Sorg... 132 1e-029
gb|BF657695.1|BF657695 OV2_20_F03.b1_A002 Ovary 2 (OV2) Sor... 132 1e-029
gb|BG412023.1|BG412023 OV2_37_A12.b1_A002 Ovary 2 (OV2) Sor... 132 1e-029
gb|CW365810.1|CW365810 fsbb001f038i06k0 Sorghum methylation... 132 2e-029
gb|CW081771.1|CW081771 104_422_10942807_114_32316_032 Sorgh... 131 2e-029
gb|CW081772.1|CW081772 104_422_10942807_114_32345_032 Sorgh... 131 2e-029
gb|CW344565.1|CW344565 104_847_11488020_148_36203_044 Sorgh... 131 2e-029
gb|BE354988.1|BE354988 DG1_10_H09.b1_A002 Dark Grown 1 (DG1... 130 4e-029
gb|BF657564.1|BF657564 OV2_23_G05.b1_A002 Ovary 2 (OV2) Sor... 128 2e-028
gb|BG240312.1|BG240312 OV1_20_E03.b1_A002 Ovary 1 (OV1) Sor... 128 2e-028
gb|AW745210.1|AW745210 LG1_387_D10.b1_A002 Light Grown 1 (L... 127 3e-028
gb|BG357712.1|BG357712 OV2_29_D08.b1_A002 Ovary 2 (OV2) Sor... 127 3e-028
gb|BG357882.1|BG357882 OV2_31_D08.b1_A002 Ovary 2 (OV2) Sor... 127 3e-028
gb|CF486426.1|CF486426 POL1_37_D04.g1_A002 Pollen Sorghum b... 101 7e-028
gb|BM324399.1|BM324399 PIC1_27_G12.b1_A002 Pathogen-infecte... 101 1e-027
gb|BG649748.1|BG649748 RHIZ2_83_B06.b1_A003 Rhizome2 (RHIZ2... 125 2e-027
gb|AW678464.1|AW678464 WS1_16_D12.b1_A002 Water-stressed 1 ... 102 2e-027
gb|CW461504.1|CW461504 fsbb001f209d06f0 Sorghum methylation... 124 2e-027
gb|BE918068.1|BE918068 OV1_1_E07.b1_A002 Ovary 1 (OV1) Sorg... 124 3e-027
gb|AW746875.1|AW746875 WS1_56_C05.b1_A002 Water-stressed 1 ... 102 4e-027
gb|CW481370.1|CW481370 fsbb001f240o12f0 Sorghum methylation... 122 2e-026
gb|CF484314.1|CF484314 POL1_4_B10.g1_A002 Pollen Sorghum bi... 100 3e-026
gb|CW293027.1|CW293027 104_773_11414425_148_35591_009 Sorgh... 121 3e-026
gb|BG054384.1|BG054384 OV2_3_G05.b1_A002 Ovary 2 (OV2) Sorg... 121 3e-026
gb|BE601014.1|BE601014 PI1_95_H02.b1_A002 Pathogen induced ... 102 4e-026
gb|CW230669.1|CW230669 104_679_11210696_116_37485_022 Sorgh... 120 6e-026
gb|CW322676.1|CW322676 104_816_11476224_116_35954_088 Sorgh... 119 8e-026
gb|CW359630.1|CW359630 fsbb001f027f15k0 Sorghum methylation... 119 8e-026
gb|BG240086.1|BG240086 OV1_17_G05.b1_A002 Ovary 1 (OV1) Sor... 119 8e-026
gb|BG241308.1|BG241308 OV1_40_G05.b1_A002 Ovary 1 (OV1) Sor... 119 8e-026
gb|CL167141.1|CL167141 104_363_10809866_114_31800_314 Sorgh... 119 1e-025
gb|CW067285.1|CW067285 104_314_10524173_115_30127 Sorghum m... 119 1e-025
gb|CW112067.1|CW112067 104_485_11104678_116_34538_083 Sorgh... 119 1e-025
gb|CW128198.1|CW128198 104_509_11113875_148_34748_004 Sorgh... 119 1e-025
gb|CW273795.1|CW273795 104_746_11404091_148_35366_040 Sorgh... 119 1e-025
gb|CW372294.1|CW372294 fsbb001f048c08f0 Sorghum methylation... 117 4e-025
gb|CW489948.1|CW489948 fsbb001f275c14k0 Sorghum methylation... 117 4e-025
gb|CL166695.1|CL166695 104_362_10809549_114_31798_381 Sorgh... 116 5e-025
gb|CW327830.1|CW327830 104_823_11478965_116_35975_019 Sorgh... 116 5e-025
gb|CW327831.1|CW327831 104_823_11478965_148_35976_019 Sorgh... 116 5e-025
gb|CW486759.1|CW486759 fsbb001f252d14f0 Sorghum methylation... 116 5e-025
gb|CW486760.1|CW486760 fsbb001f252d14k0 Sorghum methylation... 116 5e-025
gb|CW280818.1|CW280818 104_756_11407834_116_35450_043 Sorgh... 116 8e-025
gb|CW296811.1|CW296811 104_778_11461713_116_35630_035 Sorgh... 116 8e-025
gb|CW332085.1|CW332085 104_829_11481239_148_36028_086 Sorgh... 116 8e-025
gb|CW405640.1|CW405640 fsbb001f098e17f0 Sorghum methylation... 116 8e-025
gb|BM324751.1|BM324751 PIC1_35_B11.b1_A002 Pathogen-infecte... 116 8e-025
gb|CD429087.1|CD429087 ETH1_2_E10.g1_A002 Ethylene-treated ... 116 8e-025
gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-lik... 116 8e-025
gb|CW502569.1|CW502569 fsbb001f298p16f0 Sorghum methylation... 115 1e-024
gb|CW255743.1|CW255743 104_720_11226403_116_35130_072 Sorgh... 114 4e-024
gb|CD432530.1|CD432530 ETH1_30_C08.g1_A002 Ethylene-treated... 98 1e-023
gb|CD432822.1|CD432822 ETH1_33_F08.g1_A002 Ethylene-treated... 111 3e-023
gb|CW171069.1|CW171069 104_581_11155545_116_36517_035 Sorgh... 110 6e-023
gb|CW275678.1|CW275678 104_749_11405089_148_35390_013 Sorgh... 110 6e-023
gb|CF432922.1|CF432922 NIT1_19_H01.g1_A002 Nitrogen-deficie... 109 1e-022
gb|BE600878.1|BE600878 PI1_92_D01.b1_A002 Pathogen induced ... 102 2e-022
gb|CL181374.1|CL181374 104_392_10896713_116_31926_089 Sorgh... 108 2e-022
gb|CL181375.1|CL181375 104_392_10896713_148_31925_089 Sorgh... 108 2e-022
gb|CW023615.1|CW023615 104_163_10432547_1_30001 Sorghum met... 108 2e-022
gb|CW329596.1|CW329596 104_826_11479928_116_35994_028 Sorgh... 108 2e-022
gb|CW329597.1|CW329597 104_826_11479928_148_35993_028 Sorgh... 108 2e-022
gb|CW393458.1|CW393458 fsbb001f080i11k0 Sorghum methylation... 108 2e-022
gb|CW063376.1|CW063376 104_309_10521968_114_30136 Sorghum m... 107 3e-022
gb|CW327344.1|CW327344 104_823_11478696_116_35978_096 Sorgh... 107 3e-022
gb|CW072287.1|CW072287 104_325_10592182_114_30538 Sorghum m... 106 6e-022
gb|CW214896.1|CW214896 104_647_11194255_148_37166_032 Sorgh... 106 6e-022
gb|CW411862.1|CW411862 fsbb001f107d12k0 Sorghum methylation... 106 6e-022
gb|BZ694660.1|BZ694660 SP__Ba0050A11.f SP__Ba Sorghum propi... 105 1e-021
gb|CW142324.1|CW142324 104_533_11136795_116_34938_006 Sorgh... 105 1e-021
gb|CW142325.1|CW142325 104_533_11136795_148_34942_006 Sorgh... 105 1e-021
gb|CW448513.1|CW448513 fsbb001f182c17k0 Sorghum methylation... 105 1e-021
gb|CW502333.1|CW502333 fsbb001f298j20f0 Sorghum methylation... 105 1e-021
gb|CW502334.1|CW502334 fsbb001f298j20k0 Sorghum methylation... 105 1e-021
gb|CW788871.1|CW788871 SP__Ba0050A11.f SP__Ba Sorghum propi... 105 1e-021
gb|CF487280.1|CF487280 POL1_42_G07.g1_A002 Pollen Sorghum b... 99 3e-021
gb|CW061066.1|CW061066 104_304_10520200_114_30143 Sorghum m... 104 4e-021
gb|CW462985.1|CW462985 fsbb001f211f24f0 Sorghum methylation... 104 4e-021
>gb|BG048737.1|BG048737 OV1_22_D05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 407
Score = 286 bits (618), Expect = 7e-076
Identities = 120/123 (97%), Positives = 122/123 (99%)
Frame = +2 / +3
Query: 206 VAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 385
+ MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG
Sbjct: 39 IVMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 218
Query: 386 SAGITKTLERYQHCCYNAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPL 565
SAGITKTLERYQHCCYNAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGE+LGPL
Sbjct: 219 SAGITKTLERYQHCCYNAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPL 398
Query: 566 SVK 574
SVK
Sbjct: 399 SVK 407
Score = 215 bits (464), Expect = 1e-054
Identities = 94/129 (72%), Positives = 102/129 (79%)
Frame = -2 / -1
Query: 571 HTQWAKFLPKQVPLSALQGLEFCPQF*HFLVPALSFRECAIGILSIVAAMLVPF*SFCYX 392
+TQWAK LP+QVPLSALQG +FCPQF*HFLVPALSFREC IGILS+VAAML+PF* F Y
Sbjct: 404 NTQWAKVLPEQVPLSALQGFKFCPQF*HFLVPALSFRECTIGILSVVAAMLIPF*CFSYA 225
Query: 391 XXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGEGDLAVDLVLDPLELNSTPPH 212
ERDLGVAEHGELV LLEQAVAALGEGDLAVDLVLDPL+LNS+PPH
Sbjct: 224 GAAELVELAAAGEDDERDLGVAEHGELVRLLEQAVAALGEGDLAVDLVLDPLQLNSSPPH 45
Query: 211 GDVRSLASL 185
D+ L L
Sbjct: 44 DDLLLLREL 18
Score = 207 bits (447), Expect = 3e-052
Identities = 92/121 (76%), Positives = 94/121 (77%)
Frame = +1 / +2
Query: 208 RHGEGSS*AQADREQDQPPGHLLQAPQRPAQEXXXXXXXXXXXXXXXXXXQPRQALRVRQ 387
RHGEG+S*A+ADREQDQPPGHLLQAPQRPAQE QPRQALRVRQ
Sbjct: 41 RHGEGTS*AEADREQDQPPGHLLQAPQRPAQEGVRALRALRRRGRAHHLLQPRQALRVRQ 220
Query: 388 RRHNKNFRKVPTLLLQCSRFQWRTL*NSELVPGNVKTEGKIRGLAAHSEALAWGGTWPTE 567
RRHN N RKV TLLLQ SRFQW TL*NSELVPGNVKTEGKI LAAHSEALA GG WPTE
Sbjct: 221 RRHN*NTRKVSTLLLQRSRFQWCTL*NSELVPGNVKTEGKI*SLAAHSEALARGGPWPTE 400
Query: 568 C 570
C
Sbjct: 401 C 403
Score = 206 bits (444), Expect = 7e-052
Identities = 96/120 (80%), Positives = 96/120 (80%)
Frame = -3 / -2
Query: 570 TLXXXXXXXSKCL*VRCKASNFALSFDISWYQL*VSESAPLES*AL*QQCWYLSKVFVMP 391
TL SKCL*VRCKASNFALSFDISWYQL*VSESAPLES*AL*QQC YLS V VMP
Sbjct: 403 TLSGPRSSPSKCL*VRCKASNFALSFDISWYQL*VSESAPLES*AL*QQC*YLSSVLVMP 224
Query: 390 ALPNS*SLPRLEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLILFSIRLSSTRPLPM 211
ALPNS*SLPRLEKMM AFLSRPLRRLEKVTWRLILFSIR SSTRPLPM
Sbjct: 223 ALPNS*SLPRLEKMMSATSASQSTESSYAFLSRPLRRLEKVTWRLILFSIRFSSTRPLPM 44
Score = 116 bits (248), Expect = 8e-025
Identities = 48/56 (85%), Positives = 50/56 (89%)
Frame = -1 / -3
Query: 569 HSVGQVPPQASASECAARPRILPSVLTFPGTSSEFQRVRHWNLEHCSSNVGTFLKF 402
HSVGQ PP+ASASECAAR +ILPSVLTFPGTSSEFQRV HWNLE CSSNV TFL F
Sbjct: 402 HSVGQGPPRASASECAARLQILPSVLTFPGTSSEFQRVHHWNLERCSSNVDTFLVF 235
Score = 111 bits (236), Expect = 3e-023
Identities = 48/56 (85%), Positives = 49/56 (87%)
Frame = +3 / +1
Query: 402 KL*KGTNIAATMLKIPMAHSLKLRAGTRKCQN*GQNSRPCSALRGTCLGRNLAH*V 569
K *KG NIAAT LKIPM HSLKLRAGTRKCQN*GQN +PCSALRGTC GR LAH*V
Sbjct: 235 KH*KGINIAATTLKIPMVHSLKLRAGTRKCQN*GQNLKPCSALRGTCSGRTLAH*V 402
>gb|BG049032.1|BG049032 OV1_22_D05.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 493
Score = 218 bits (471), Expect = 1e-055
Identities = 101/140 (72%), Positives = 109/140 (77%)
Frame = +1 / +3
Query: 574 GVAAARETARMCFVTGKTEKDTTYDGASGRAPQKGATPGRNEQATQTQA*S*RL*QLQNP 753
G+AAARETARMCFVTGKTEKDTTYDGASGRA QKGA+PGRNEQATQTQA*S*R *QLQN
Sbjct: 6 GIAAARETARMCFVTGKTEKDTTYDGASGRASQKGASPGRNEQATQTQA*S*RF*QLQNL 185
Query: 754 AACSLASSRQHHGGA*RRHLSCASNNCSIGCNGL*THSANRVPSSSPVSAFRGSQ*YPKE 933
AAC +S + H R S+ CS+ C L*THSAN VPSS + GSQ*YPKE
Sbjct: 186 AACRRLASSRRHHRGA*RRHVSCSSTCSLSCYRL*THSANWVPSSPVSAF*SGSQ*YPKE 365
Query: 934 PPWRREQLHAGMGSLSCSVN 993
P RREQLHAGMGSLSCS+N
Sbjct: 366 RPRRREQLHAGMGSLSCSLN 425
Score = 152 bits (327), Expect = 1e-035
Identities = 70/110 (63%), Positives = 84/110 (76%)
Frame = -2 / -2
Query: 994 D*QSNSKNPSQHEVVLASRGAPWDIIGCLGRQKLVMRRVPDLQSGFTVHCNRLSSCWMHM 815
D*++NSKNPSQHEVVLAS G PWDIIGCL R++ ++ RVP+LQSGFTV+ N +S +
Sbjct: 426 D*ENNSKNPSQHEVVLASGGVPWDIIGCLIRRQKLVMRVPNLQSGFTVYSN*VSRWMNMI 247
Query: 814 IGGAVMLHHGAAGSWPGCMLQGSVVATTFSFKLVFELPVHFSQVSLLSAE 665
G ++ A G MLQGSVVA TFSFKLVFELPVHFSQV+LLSA+
Sbjct: 246 RGAVMLHDGAAGSWPGGGMLQGSVVARTFSFKLVFELPVHFSQVTLLSAK 97
Score = 151 bits (324), Expect(3) = 3e-070
Identities = 65/66 (98%), Positives = 65/66 (98%)
Frame = +2 / +1
Query: 569 VKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERHLGEMNRQLKHKLEAEGCSNYR 748
VKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERHLGEMNRQLKHKLEAEG SNYR
Sbjct: 1 VKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERHLGEMNRQLKHKLEAEGSSNYR 180
Query: 749 TLQHAA 766
TLQHAA
Sbjct: 181 TLQHAA 198
Score = 123 bits (264), Expect(4) = 4e-060
Identities = 51/54 (94%), Positives = 53/54 (98%)
Frame = -3 / -3
Query: 765 AACCRVL*LLQPSASSLCLSCLFISPRCRSFLRSSSTCSIISCVFLCLACDKAH 604
AACC+VL*LL+PSASSLCLSCLFISPR RSFLRSSSTCSIISCVFLCLACDKAH
Sbjct: 197 AACCKVL*LLEPSASSLCLSCLFISPR*RSFLRSSSTCSIISCVFLCLACDKAH 36
Score = 123 bits (264), Expect(3) = 5e-054
Identities = 50/54 (92%), Positives = 51/54 (94%)
Frame = +3 / +2
Query: 606 VLCHRQDRERHNL*WSKWKSSAERSDTWEK*TGNSNTSLKLKVVATTEPCSMQP 767
VLCHRQDRERHNL*WSKWKS AERS TWEK*TGNSNTSLKLKV+ATTEPCSM P
Sbjct: 38 VLCHRQDRERHNL*WSKWKSFAERSVTWEK*TGNSNTSLKLKVLATTEPCSMPP 199
Score = 97.3 bits (206), Expect(3) = 3e-070
Identities = 40/54 (74%), Positives = 43/54 (79%)
Frame = +2 / +1
Query: 833 AQSVAMDCEPTLQIGYPPHHQFLPSEAANNIPRSPPGGENNFMLGWVL*VALLI 994
A SVA+DCEPTLQIGYP H +AANNIPR+ PGGENNFMLGWVL*V L I
Sbjct: 265 AHSVAIDCEPTLQIGYPHHQFLPSDQAANNIPRNAPGGENNFMLGWVL*VVLSI 426
Score = 89.5 bits (189), Expect(4) = 4e-060
Identities = 38/55 (69%), Positives = 43/55 (78%)
Frame = -1 / -1
Query: 992 LTEQLKEPIPA*SCSRLQGGSLGYYWLPRKAETGDEEGTRFAEWVHSPLQPIEQL 828
L EQLKEPIPA*SCSRL+G SLGYYWLP + +EGT+FAEWVHS Q EQ+
Sbjct: 424 LREQLKEPIPA*SCSRLRGRSLGYYWLPDQKAETGDEGTQFAEWVHSL*QLSEQV 260
Score = 87.2 bits (184), Expect(3) = 5e-054
Identities = 38/58 (65%), Positives = 42/58 (72%)
Frame = +3 / +2
Query: 810 PIMCIQQLLNRLQWTVNPLCKSGTLLITSFCLPRQPIISQGAPLEARTTSCWDGFFEL 983
P + LL +L TVNPLCK GTL+ + L RQPIISQG P EARTTSCWDGFFEL
Sbjct: 242 PRIMFIHLLTQLL*TVNPLCKLGTLITSFCLLIRQPIISQGTPPEARTTSCWDGFFEL 415
Score = 72.5 bits (152), Expect(5) = 3e-036
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = -1 / -1
Query: 767 RLHAAGFCSCYNLQLQACV*VACSFLPGVAPFCGA 663
R HAA FCSC NLQLQACV*VACSFLPG APFC A
Sbjct: 199 RRHAARFCSC*NLQLQACV*VACSFLPGDAPFCEA 95
Score = 58.3 bits (121), Expect(3) = 3e-070
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +2 / +1
Query: 761 AAWPAPGSTMVEHDGATYHVHP 826
AAWPAPG T+VEHDGATYHVHP
Sbjct: 196 AAWPAPGGTIVEHDGATYHVHP 261
Score = 50.1 bits (103), Expect(4) = 4e-060
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -2 / -2
Query: 832 SCWMHMIGGAVMLHHGAAGSWPG 764
S WM+MI GAVMLH GAAGSWPG
Sbjct: 267 SRWMNMIRGAVMLHDGAAGSWPG 199
Score = 48.3 bits (99), Expect(5) = 3e-036
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -1 / -1
Query: 839 IEQLLDAHDRWRRHAPPWCCRELAR 765
+ + +D HD WRRHAP WC RELAR
Sbjct: 274 LSEQVDEHDTWRRHAPRWCRRELAR 200
Score = 42.8 bits (87), Expect(5) = 3e-036
Identities = 19/28 (67%), Positives = 19/28 (67%)
Frame = -3 / -3
Query: 993 INRATQRTHPSMKLFSPPXXXXXXXLAA 910
I R TQRTHPSMKLFSPP LAA
Sbjct: 425 IERTTQRTHPSMKLFSPPGAFLGILLAA 342
Score = 41.4 bits (84), Expect(3) = 5e-054
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1 / +3
Query: 766 LASSRQHHGGA*RRHLSCAS 825
LASSR+HH GA*RRH+SC+S
Sbjct: 201 LASSRRHHRGA*RRHVSCSS 260
Score = 40.0 bits (81), Expect(5) = 3e-036
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -3 / -3
Query: 882 GYPICRVGSQSIATD*A 832
GYPICRVGSQSIAT+*A
Sbjct: 314 GYPICRVGSQSIATE*A 264
Score = 27.6 bits (54), Expect(4) = 4e-060
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -1
Query: 614 TKHIRAVSLAAATP 573
TKHI AVSLAAA P
Sbjct: 46 TKHILAVSLAAAIP 5
Score = 23.5 bits (45), Expect(5) = 3e-036
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / -3
Query: 909 SEGRNW**G 883
SEGRNW**G
Sbjct: 338 SEGRNW**G 312
>gb|U49734.1|SBU49734 Sorghum bicolor MADS box transcription factor SbMADS1 mRNA,
complete cds
Length = 1055
Score = 131 bits (281), Expect(4) = 8e-055
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +2 / +1
Query: 209 AMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
AMGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S
Sbjct: 43 AMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 222
Score = 100 bits (212), Expect(4) = 8e-055
Identities = 44/85 (51%), Positives = 63/85 (74%)
Frame = +2 / +1
Query: 470 QSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMM 649
QS E KL+A+ + LQRTQR+LLGE+LG L +KEL+QLEKQL+ +L R +TQ M+
Sbjct: 310 QSSRNEYLKLKARVDNLQRTQRNLLGEDLGSLGIKELEQLEKQLDSSLRHIRSTRTQHML 489
Query: 650 EQVEELRRKERHLGEMNRQLKHKLE 724
+Q+ +L+R+E+ L E N+ L+ KLE
Sbjct: 490 DQLTDLQRREQMLCEANKCLRRKLE 564
Score = 27.2 bits (53), Expect(4) = 8e-055
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / +3
Query: 857 EPTLQIGYPPHH 892
EPTLQIG+ P H
Sbjct: 702 EPTLQIGFAPEH 737
Score = 22.1 bits (42), Expect(4) = 8e-055
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2 / +1
Query: 395 ITKTLERYQ 421
ITKTLERY+
Sbjct: 232 ITKTLERYE 258
>gb|AY827471.1| Sorghum bicolor MADS box transcription factor mRNA, partial cds
Length = 829
Score = 208 bits (448), Expect = 2e-052
Identities = 91/163 (55%), Positives = 120/163 (73%)
Frame = +2 / +1
Query: 230 ELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTL 409
E++RIENKI+RQVTF+KRRNGLLKKAYELSVLCDAEVALIIFSSRG+L+EF ++ T
Sbjct: 1 EMRRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGRLFEFSTSSCTYKT 180
Query: 410 ERYQHCCYNAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQL 589
C A +++ L + YQE KL+ K E LQ TQR+LLGE+LGPL+VKEL+QL
Sbjct: 181 LERYRSCNFASEASAPLEAELNNYQEYLKLKTKVEFLQTTQRNLLGEDLGPLNVKELEQL 360
Query: 590 EKQLECALSQARQRKTQLMMEQVEELRRKERHLGEMNRQLKHK 718
E Q+E +L R K + M++Q+ +L+RKE+ L + N+ L+ K
Sbjct: 361 ENQIEISLKHIRSSKNRQMLDQLFDLKRKEQQLQDANKDLRRK 489
>gb|CF480443.1|CF480443 POL1_65_G02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_65_G02_A002 5', mRNA sequence
Length = 758
Score = 120 bits (256), Expect(3) = 2e-051
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG V+L+RIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVALI+FS++GKLYE+ S
Sbjct: 123 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVALIVFSTKGKLYEYSS 299
Score = 100 bits (214), Expect(3) = 2e-051
Identities = 41/91 (45%), Positives = 64/91 (70%)
Frame = +2 / +3
Query: 458 LSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKT 637
+ + +W E +L++K +ALQ++QR LLGE+L L++KELQQLE+QL+ +L R RK
Sbjct: 375 IEDQANWGDEYVRLKSKLDALQKSQRQLLGEQLDSLTIKELQQLEQQLDSSLKHIRSRKN 554
Query: 638 QLMMEQVEELRRKERHLGEMNRQLKHKLEAE 730
QLM + + EL++KE+ L + N L+ +EAE
Sbjct: 555 QLMFDSISELQKKEKALTDQNGVLQKLMEAE 647
Score = 22.6 bits (43), Expect(3) = 2e-051
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2 / +1
Query: 779 GSTMVEHDGATYHVH 823
GS+ +EH A +H H
Sbjct: 685 GSSQMEHQQAPHHCH 729
>gb|BE918053.1|BE918053 OV1_1_C11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 561
Score = 133 bits (284), Expect(3) = 1e-050
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +2 / +1
Query: 188 GS*RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRG 367
G R+ MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RG
Sbjct: 19 GGGRAATNMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRG 198
Query: 368 KLYEFGS 388
KLYEF S
Sbjct: 199 KLYEFSS 219
Score = 85.4 bits (180), Expect(3) = 1e-050
Identities = 37/85 (43%), Positives = 59/85 (69%)
Frame = +2 / +1
Query: 464 ETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQL 643
+ +S E KL+A+ + LQRTQR+LLGE+L L +KEL+ LEKQL+ +L R +TQ
Sbjct: 307 QLKSSRNEYLKLKARVDNLQRTQRNLLGEDLESLGIKELEHLEKQLDSSLKHIRSTRTQH 486
Query: 644 MMEQVEELRRKERHLGEMNRQLKHK 718
M++Q+ EL+++E+ E N+ L+ +
Sbjct: 487 MVDQLTELQKREQMFCEANKCLRRR 561
Score = 22.6 bits (43), Expect(3) = 1e-050
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +1
Query: 401 KTLERYQHCCY 433
KTLE+YQ C +
Sbjct: 235 KTLEKYQKCSF 267
>gb|BE918762.1|BE918762 OV1_4_F11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 548
Score = 133 bits (284), Expect(3) = 6e-050
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +2 / +1
Query: 188 GS*RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRG 367
G R+ MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RG
Sbjct: 19 GGGRAATNMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRG 198
Query: 368 KLYEFGS 388
KLYEF S
Sbjct: 199 KLYEFSS 219
Score = 83.1 bits (175), Expect(3) = 6e-050
Identities = 36/80 (45%), Positives = 56/80 (70%)
Frame = +2 / +1
Query: 464 ETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQL 643
+ +S E KL+A+ + LQRTQR+LLGE+L L +KEL+ LEKQL+ +L R +TQ
Sbjct: 307 QLKSSRNEYLKLKARVDNLQRTQRNLLGEDLESLGIKELEHLEKQLDSSLKHIRSTRTQH 486
Query: 644 MMEQVEELRRKERHLGEMNR 703
M++Q+ EL+++E+ E N+
Sbjct: 487 MVDQLTELQKREQMFCEANK 546
Score = 22.6 bits (43), Expect(3) = 6e-050
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +1
Query: 401 KTLERYQHCCY 433
KTLE+YQ C +
Sbjct: 235 KTLEKYQKCSF 267
>gb|CD233526.1|CD233526 SS1_2_G04.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_2_G04_A012 5', mRNA sequence
Length = 676
Score = 120 bits (256), Expect(2) = 2e-048
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +1
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG V+L+RIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVALI+FS++GKLYE+ S
Sbjct: 163 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVALIVFSTKGKLYEYSS 339
Score = 95.0 bits (201), Expect(2) = 2e-048
Identities = 38/85 (44%), Positives = 60/85 (70%)
Frame = +2 / +1
Query: 458 LSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKT 637
+ + +W E +L++K +ALQ++QR LLGE+L L++KELQQLE+QL+ +L R RK
Sbjct: 415 IEDQANWGDEYVRLKSKLDALQKSQRQLLGEQLDSLTIKELQQLEQQLDSSLKHIRSRKN 594
Query: 638 QLMMEQVEELRRKERHLGEMNRQLK 712
QLM + + EL++KE+ L + N L+
Sbjct: 595 QLMFDSISELQKKEKALTDQNGVLQ 669
>gb|CD431694.1|CD431694 ETH1_10_G05.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_10_G05_A002 5', mRNA sequence
Length = 654
Score = 120 bits (256), Expect(2) = 3e-048
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG V+L+RIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVALI+FS++GKLYE+ S
Sbjct: 152 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVALIVFSTKGKLYEYSS 328
Score = 94.5 bits (200), Expect(2) = 3e-048
Identities = 37/81 (45%), Positives = 58/81 (71%)
Frame = +2 / +2
Query: 458 LSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKT 637
+ + +W E +L++K +ALQ++QR LLGE+L L++KELQQLE+QL+ +L R RK
Sbjct: 404 IEDQANWGDEYVRLKSKLDALQKSQRQLLGEQLDSLTIKELQQLEQQLDSSLKHIRSRKN 583
Query: 638 QLMMEQVEELRRKERHLGEMN 700
QLM + + EL++KE+ L + N
Sbjct: 584 QLMFDSISELQKKEKALTDQN 646
>gb|AY597522.1| Sorghum bicolor leafy hull sterile 1 (LHS1) mRNA, partial cds
Length = 669
Score = 103 bits (220), Expect(3) = 1e-046
Identities = 42/88 (47%), Positives = 64/88 (72%)
Frame = +2 / +1
Query: 479 YQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQV 658
YQ+ KLR + E LQ TQR++LGE LGPLS+KEL+QLE Q+E +L Q R R+ Q++++Q+
Sbjct: 238 YQDYLKLRTRVEFLQTTQRNILGEVLGPLSMKELEQLENQIETSLKQIRSRENQMLLDQL 417
Query: 659 EELRRKERHLGEMNRQLKHKLEAEGCSN 742
+L+ KE+ L ++N+ L+ KL+ N
Sbjct: 418 FDLKSKEQELQDLNKDLRKKLQETSPEN 501
Score = 100 bits (213), Expect(3) = 1e-046
Identities = 41/50 (82%), Positives = 48/50 (96%)
Frame = +2 / +1
Query: 242 IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
IENKI+RQVTF+KRRNGLLKKAYELS++CDAEVALIIFS RG+L+EF S+
Sbjct: 1 IENKISRQVTFAKRRNGLLKKAYELSLMCDAEVALIIFSGRGRLFEFSSS 150
Score = 23.1 bits (44), Expect(3) = 1e-046
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 386 SAGITKTLERYQHCCYNAQD 445
S+ + KTLERY+ Y++Q+
Sbjct: 148 SSCMYKTLERYRSSNYSSQE 207
>gb|U32110.1|SBU32110 Sorghum bicolor putative MADS box protein (SbMADS2) mRNA, partial
cds
Length = 1186
Score = 109 bits (233), Expect(2) = 2e-046
Identities = 44/55 (80%), Positives = 53/55 (96%)
Frame = +2 / +3
Query: 224 RVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
+V+LKRIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLYE+ +
Sbjct: 3 KVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYAT 167
Score = 98.7 bits (209), Expect(2) = 2e-046
Identities = 41/83 (49%), Positives = 58/83 (69%)
Frame = +2 / +3
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ +HL+GE+L L+ KELQQLE+QLE +L R RK+ LM E
Sbjct: 258 NWCHEYRKLKAKIETIQKCHKHLMGEDLESLNPKELQQLEQQLESSLKHIRSRKSHLMAE 437
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 438 SISELQKKERSLQEENKALQKEL 506
>gb|CD463019.1|CD463019 ETH1_41_H12.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_41_H12_A002 5', mRNA sequence
Length = 768
Score = 108 bits (230), Expect(2) = 9e-041
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +2 / +1
Query: 218 RGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
RGR E++RIE+ +RQVTFSKRR+GLLKKAYELSVLCDAEVALI+FS RG+LY+F SA
Sbjct: 217 RGRREMRRIEDSTSRQVTFSKRRSGLLKKAYELSVLCDAEVALIVFSPRGRLYQFASA 390
Score = 81.3 bits (171), Expect(2) = 9e-041
Identities = 38/86 (44%), Positives = 56/86 (65%)
Frame = +2 / +1
Query: 470 QSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMM 649
+ W E + L K +A++ +R LLGE LG SV+EL++LE QLE +LS RQRK + +M
Sbjct: 472 EKWKYEATTLGKKIDAIETYKRKLLGENLGSCSVQELKELEAQLEKSLSIIRQRKERKLM 651
Query: 650 EQVEELRRKERHLGEMNRQLKHKLEA 727
+Q+ ELR KE+ L N L+ + +A
Sbjct: 652 DQILELREKEQKLLMENAMLRDQCKA 729
>gb|BG412085.1|BG412085 OV2_37_G09.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 496
Score = 130 bits (278), Expect(2) = 1e-038
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +2 / +3
Query: 209 AMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
+MGRGR+E+KRIEN +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 102 SMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 281
Query: 389 AGITKTLERYQ 421
+ T+ERY+
Sbjct: 282 NSVKATIERYK 314
Score = 52.4 bits (108), Expect(2) = 1e-038
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +2 / +3
Query: 470 QSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLE 592
Q + QE +KLR + + LQ T RHL+G+ +G L++KEL+QLE
Sbjct: 372 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLTLKELKQLE 494
>gb|BG357222.1|BG357222 OV2_11_C11.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 538
Score = 133 bits (284), Expect(3) = 4e-038
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +2 / +3
Query: 188 GS*RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRG 367
G R+ MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RG
Sbjct: 135 GGGRAATNMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRG 314
Query: 368 KLYEFGS 388
KLYEF S
Sbjct: 315 KLYEFSS 335
Score = 43.2 bits (88), Expect(3) = 4e-038
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +2 / +3
Query: 464 ETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKE 577
+ +S E KL+A+ + LQRTQR+LLGE+L L +KE
Sbjct: 423 QLKSSRNEYLKLKARVDNLQRTQRNLLGEDLESLGIKE 536
Score = 22.6 bits (43), Expect(3) = 4e-038
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +3
Query: 401 KTLERYQHCCY 433
KTLE+YQ C +
Sbjct: 351 KTLEKYQKCSF 383
>gb|BG357245.1|BG357245 OV2_11_F01.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 435
Score = 122 bits (262), Expect(3) = 1e-037
Identities = 51/60 (85%), Positives = 58/60 (96%)
Frame = +2 / +1
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRG+VELKRIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVALIIFS RG+L+EF S+
Sbjct: 64 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 243
Score = 51.0 bits (105), Expect(3) = 1e-037
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = +2 / +1
Query: 479 YQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQ 583
YQ+ KLR + E LQ TQR++LGE+LG LS+KEL+
Sbjct: 331 YQDYLKLRTRVEFLQTTQRNILGEDLGXLSMKELE 435
Score = 23.1 bits (44), Expect(3) = 1e-037
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 386 SAGITKTLERYQHCCYNAQD 445
S+ + KTLERY+ Y++Q+
Sbjct: 241 SSCMYKTLERYRSSNYSSQE 300
>gb|BE918857.1|BE918857 FM1_1_A12.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 530
Score = 132 bits (283), Expect(2) = 4e-037
Identities = 55/93 (59%), Positives = 69/93 (74%)
Frame = +2 / +1
Query: 215 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 394
GRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 130 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 309
Query: 395 ITKTLERYQHCCYNAQDSNGALSETQSWYQEMS 493
+ T+ERY+ + +S + YQ+ S
Sbjct: 310 VKSTIERYKKANSDTSNSGTVAEVSAQHYQQES 408
Score = 44.6 bits (91), Expect(2) = 4e-037
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2 / +1
Query: 470 QSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLE 604
Q + QE SKLR +LQ R ++G+ + +S+++L+QLE +LE
Sbjct: 388 QHYQQESSKLRQTISSLQNANRTIVGDSIHTMSLRDLKQLEGRLE 522
>gb|BF657168.1|BF657168 OV2_21_E10.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 474
Score = 132 bits (283), Expect(2) = 4e-037
Identities = 55/93 (59%), Positives = 69/93 (74%)
Frame = +2 / +3
Query: 215 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 394
GRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 72 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 251
Query: 395 ITKTLERYQHCCYNAQDSNGALSETQSWYQEMS 493
+ T+ERY+ + +S + YQ+ S
Sbjct: 252 VKSTIERYKKANSDTSNSGTVAEVSAQHYQQES 350
Score = 44.6 bits (91), Expect(2) = 4e-037
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2 / +3
Query: 470 QSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLE 604
Q + QE SKLR +LQ R ++G+ + +S+++L+QLE +LE
Sbjct: 330 QHYQQESSKLRQTISSLQNANRTIVGDSIHTMSLRDLKQLEGRLE 464
>gb|BF657741.1|BF657741 OV2_17_D12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 572
Score = 132 bits (283), Expect(2) = 8e-037
Identities = 55/93 (59%), Positives = 69/93 (74%)
Frame = +2 / +3
Query: 215 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 394
GRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 174 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 353
Query: 395 ITKTLERYQHCCYNAQDSNGALSETQSWYQEMS 493
+ T+ERY+ + +S + YQ+ S
Sbjct: 354 VKSTIERYKKANSDTSNSGTVAEVSAQHYQQES 452
Score = 43.7 bits (89), Expect(2) = 8e-037
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2 / +3
Query: 470 QSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLE 604
Q + QE SKLR +LQ R ++G+ + +S+++L+QLE LE
Sbjct: 432 QHYQQESSKLRQTISSLQNANRTIVGDSIHTMSLRDLKQLEGXLE 566
>gb|BE918862.1|BE918862 FM1_1_B06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 515
Score = 132 bits (283), Expect(2) = 5e-036
Identities = 55/93 (59%), Positives = 69/93 (74%)
Frame = +2 / +1
Query: 215 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 394
GRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 130 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 309
Query: 395 ITKTLERYQHCCYNAQDSNGALSETQSWYQEMS 493
+ T+ERY+ + +S + YQ+ S
Sbjct: 310 VKSTIERYKKANSDTSNSGTVAEVSAQHYQQES 408
Score = 40.9 bits (83), Expect(2) = 5e-036
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +2 / +1
Query: 470 QSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLE 592
Q + QE SKLR +LQ R ++G+ + +S+++L+QLE
Sbjct: 388 QHYQQESSKLRQTISSLQNANRTIVGDSIHTMSLRDLKQLE 510
>gb|CN135385.1|CN135385 OX1_32_B05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_32_B05_A002 5', mRNA sequence
Length = 793
Score = 101 bits (215), Expect(2) = 1e-034
Identities = 44/73 (60%), Positives = 55/73 (75%)
Frame = +2 / +3
Query: 200 SYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYE 379
S M R R E+KRIE+ RQVTFSKRR GL KKA ELSVLCDA+VALI+FSS GKL +
Sbjct: 222 SAAGMARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSQ 401
Query: 380 FGSAGITKTLERY 418
F S+ + + +++Y
Sbjct: 402 FASSSMNEIIDKY 440
Score = 67.5 bits (141), Expect(2) = 1e-034
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = +2 / +3
Query: 533 RHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERHLGEMNRQLK 712
R + GEEL LSV+ELQQLEK LE L + Q K Q +EQ+ +L RK L E N QL
Sbjct: 555 RQMRGEELEGLSVEELQQLEKNLETGLHRVLQTKDQQFLEQISDLERKSTQLAEENMQLX 734
Query: 713 HKL 721
+++
Sbjct: 735 NQV 743
>gb|CN132026.1|CN132026 OX1_3_D10.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_3_D10_A002 5', mRNA sequence
Length = 678
Score = 102 bits (218), Expect(2) = 5e-033
Identities = 45/88 (51%), Positives = 59/88 (67%)
Frame = +2 / +2
Query: 185 EGS*RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSR 364
E S R +A R R+ ++RI+N RQVTFSKRR GL KKA ELS+LCDAEV L++FS+
Sbjct: 80 EDSKRGTMAGKRERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSAT 259
Query: 365 GKLYEFGSAGITKTLERYQHCCYNAQDS 448
GKL+ F S + + ++RY N Q S
Sbjct: 260 GKLFHFASTSMKQVIDRYDSHSKNLQKS 343
Score = 60.6 bits (126), Expect(2) = 5e-033
Identities = 28/78 (35%), Positives = 46/78 (58%)
Frame = +2 / +2
Query: 491 SKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELR 670
++L+ + R + GEEL LSV++LQ+LEK LE L + K+Q +++++ L
Sbjct: 389 ARLKQELAETSLKLRQMRGEELQRLSVQQLQELEKTLESGLGSVLKTKSQKILDEISGLE 568
Query: 671 RKERHLGEMNRQLKHKLE 724
RK L E N +LK +L+
Sbjct: 569 RKRMELIEENSRLKEQLQ 622
>gb|BG240232.1|BG240232 OV1_19_E04.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 475
Score = 81.7 bits (172), Expect(2) = 1e-032
Identities = 34/85 (40%), Positives = 56/85 (65%)
Frame = +2 / +1
Query: 470 QSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMM 649
Q + QE +KLR + + LQ T RHL+G+ +G L++KEL+QLE +LE +S+ R RK +L+
Sbjct: 196 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLTLKELKQLESRLEKGISKVRARKNELLA 375
Query: 650 EQVEELRRKERHLGEMNRQLKHKLE 724
++ + ++E L + LK K+E
Sbjct: 376 AEINYMAKRETELQNDHMNLKTKIE 450
Score = 80.8 bits (170), Expect(2) = 1e-032
Identities = 32/44 (72%), Positives = 39/44 (88%)
Frame = +2 / +1
Query: 290 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLERYQ 421
GLLKKAYELSVLCDAEVALI+FSSRG+LYE+ + + T+ERY+
Sbjct: 7 GLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYK 138
>gb|CN129656.1|CN129656 RHOH1_36_D08.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_36_D08_A002 5', mRNA sequence
Length = 794
Score = 102 bits (218), Expect(2) = 3e-032
Identities = 45/88 (51%), Positives = 59/88 (67%)
Frame = +2 / +2
Query: 185 EGS*RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSR 364
E S R +A R R+ ++RI+N RQVTFSKRR GL KKA ELS+LCDAEV L++FS+
Sbjct: 80 EDSKRGTMAGKRERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSAT 259
Query: 365 GKLYEFGSAGITKTLERYQHCCYNAQDS 448
GKL+ F S + + ++RY N Q S
Sbjct: 260 GKLFHFASTSMKQVIDRYDSHSKNLQKS 343
Score = 58.3 bits (121), Expect(2) = 3e-032
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = +2 / +2
Query: 491 SKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELR 670
++L+ + R + GEEL LSV++LQ+LEK LE L + K+Q +++++ L
Sbjct: 389 ARLKQELAETSLKLRQMRGEELQRLSVQQLQELEKTLESGLGSVLKTKSQKILDEISGLE 568
Query: 671 RKERHLGEMNRQLKHKL 721
RK L E N +LK ++
Sbjct: 569 RKRMELIEENSRLKEQV 619
>gb|CN134777.1|CN134777 OX1_28_A03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_28_A03_A002 5', mRNA sequence
Length = 775
Score = 102 bits (218), Expect(2) = 3e-032
Identities = 45/88 (51%), Positives = 59/88 (67%)
Frame = +2 / +2
Query: 185 EGS*RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSR 364
E S R +A R R+ ++RI+N RQVTFSKRR GL KKA ELS+LCDAEV L++FS+
Sbjct: 68 EDSKRGTMAGKRERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSAA 247
Query: 365 GKLYEFGSAGITKTLERYQHCCYNAQDS 448
GKL+ F S + + ++RY N Q S
Sbjct: 248 GKLFHFASTSMKQVIDRYDSHSKNLQKS 331
Score = 58.3 bits (121), Expect(2) = 3e-032
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = +2 / +2
Query: 491 SKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELR 670
++L+ + R + GEEL LSV++LQ+LEK LE L + K+Q +++++ L
Sbjct: 377 ARLKQELAETSLKLRQMRGEELQRLSVQQLQELEKTLESGLGSVLKTKSQKILDEISGLE 556
Query: 671 RKERHLGEMNRQLKHKL 721
RK L E N +LK ++
Sbjct: 557 RKRMELIEENSRLKEQV 607
>gb|CN132011.1|CN132011 OX1_3_C05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_3_C05_A002 5', mRNA sequence
Length = 723
Score = 102 bits (218), Expect(2) = 3e-032
Identities = 45/88 (51%), Positives = 59/88 (67%)
Frame = +2 / +2
Query: 185 EGS*RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSR 364
E S R +A R R+ ++RI+N RQVTFSKRR GL KKA ELS+LCDAEV L++FS+
Sbjct: 80 EDSKRGTMAGKRERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSAT 259
Query: 365 GKLYEFGSAGITKTLERYQHCCYNAQDS 448
GKL+ F S + + ++RY N Q S
Sbjct: 260 GKLFHFASTSMKQVIDRYDSHSKNLQKS 343
Score = 58.3 bits (121), Expect(2) = 3e-032
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = +2 / +2
Query: 491 SKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELR 670
++L+ + R + GEEL LSV++LQ+LEK LE L + K+Q +++++ L
Sbjct: 389 ARLKQELAETSLKLRQMRGEELQRLSVQQLQELEKTLESGLGSVLKTKSQKILDEISGLE 568
Query: 671 RKERHLGEMNRQLKHKL 721
RK L E N +LK ++
Sbjct: 569 RKRMELIEENSRLKEQV 619
>gb|CF431741.1|CF431741 NIT1_10_D03.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_10_D03_A002 5', mRNA sequence
Length = 457
Score = 118 bits (253), Expect(2) = 3e-032
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG V L+RIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVALI+FS++GKLYE+ S
Sbjct: 92 MGRGPVPLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVALIVFSAKGKLYEYSS 268
Score = 42.3 bits (86), Expect(2) = 3e-032
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +2 / +2
Query: 458 LSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSV 571
+ + +W E +L++K +ALQ++QR LLGE+L L++
Sbjct: 344 IEDQANWGDEYVRLKSKLDALQKSQRQLLGEQLDSLTI 457
>gb|BM323459.1|BM323459 PIC1_19_E07.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 499
Score = 139 bits (299), Expect = 7e-032
Identities = 59/113 (52%), Positives = 77/113 (68%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRG++ ++RI+N +RQVTFSKRRNGLLKKA ELS+LCDAEV LIIFSS G+LYEF S
Sbjct: 159 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIIFSSTGRLYEFSST 338
Query: 392 GITKTLERYQHCCYNAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGE 550
+ ++RY +N A SE W +E + LR + LQ + + L+GE
Sbjct: 339 NMKAVIDRYGKAKEEQIGTNNATSELMLWQREAASLRQQLHNLQESHKQLMGE 497
>gb|BI098309.1|BI098309 IP1_30_G10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 509
Score = 131 bits (281), Expect(2) = 3e-031
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +2 / +3
Query: 209 AMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
AMGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S
Sbjct: 180 AMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 359
Score = 25.8 bits (50), Expect(2) = 3e-031
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2 / +3
Query: 395 ITKTLERYQHCCYNAQDS 448
ITKTLERY+ Y D+
Sbjct: 369 ITKTLERYEKSNYGGPDT 422
>gb|BG948060.1|BG948060 IP1_8_H04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 440
Score = 131 bits (281), Expect(2) = 3e-031
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +2 / +3
Query: 209 AMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
AMGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S
Sbjct: 183 AMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 362
Score = 25.8 bits (50), Expect(2) = 3e-031
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2 / +3
Query: 395 ITKTLERYQHCCYNAQDS 448
ITKTLERY+ Y D+
Sbjct: 372 ITKTLERYEKSNYGGPDT 425
>gb|CW380917.1|CW380917 fsbb001f062a07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f062a07, DNA
sequence
Length = 270
Score = 136 bits (292), Expect = 6e-031
Identities = 60/65 (92%), Positives = 61/65 (93%)
Frame = +2 / -1
Query: 200 SYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYE 379
S VAMGRGRVELKRIENKINRQVT SKRRNGLLKKAYELSVLC AEVALI+FSSRGKLYE
Sbjct: 249 SEVAMGRGRVELKRIENKINRQVTLSKRRNGLLKKAYELSVLCGAEVALIVFSSRGKLYE 70
Query: 380 FGSAG 394
GSAG
Sbjct: 69 LGSAG 55
>gb|CN135407.1|CN135407 OX1_32_D03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_32_D03_A002 5', mRNA sequence
Length = 740
Score = 102 bits (218), Expect(2) = 3e-030
Identities = 45/88 (51%), Positives = 59/88 (67%)
Frame = +2 / +2
Query: 185 EGS*RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSR 364
E S R +A R R+ ++RI+N RQVTFSKRR GL KKA ELS+LCDAEV L++FS+
Sbjct: 227 EDSKRGTMAGKRERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSAT 406
Query: 365 GKLYEFGSAGITKTLERYQHCCYNAQDS 448
GKL+ F S + + ++RY N Q S
Sbjct: 407 GKLFHFASTSMKQVIDRYDSHSKNLQKS 490
Score = 51.5 bits (106), Expect(2) = 3e-030
Identities = 24/68 (35%), Positives = 39/68 (57%)
Frame = +2 / +2
Query: 491 SKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELR 670
++L+ + R + GEEL LSV++LQ+LEK LE L + K+Q +++++ L
Sbjct: 536 ARLKQELAETSLKLRQMRGEELQRLSVQQLQELEKTLESGLGSVLKTKSQKILDEISGLE 715
Query: 671 RKERHLGE 694
RK L E
Sbjct: 716 RKRMELIE 739
>gb|CW034003.1|CW034003 104_263_10502289_114_30359 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502289, DNA
sequence
Length = 697
Score = 133 bits (284), Expect = 8e-030
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +2 / -1
Query: 188 GS*RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRG 367
G R+ MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RG
Sbjct: 475 GGGRAATNMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRG 296
Query: 368 KLYEFGS 388
KLYEF S
Sbjct: 295 KLYEFSS 275
>gb|CW034004.1|CW034004 104_263_10502289_115_30360 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502289, DNA
sequence
Length = 716
Score = 133 bits (284), Expect = 8e-030
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +2 / +1
Query: 188 GS*RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRG 367
G R+ MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RG
Sbjct: 442 GGGRAATNMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRG 621
Query: 368 KLYEFGS 388
KLYEF S
Sbjct: 622 KLYEFSS 642
>gb|BE596704.1|BE596704 PI1_58_F04.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 581
Score = 133 bits (284), Expect = 8e-030
Identities = 56/109 (51%), Positives = 74/109 (67%)
Frame = +2 / +1
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRG++ ++RI+N +RQVTFSKRRNGLLKKA ELS+LCDAEV LIIFSS G+LYEF S
Sbjct: 97 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIIFSSTGRLYEFSST 276
Query: 392 GITKTLERYQHCCYNAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRH 538
+ ++RY +N A SE W +E + LR + LQ + ++
Sbjct: 277 NMKAVIDRYGKAKEEQIGTNNATSELMLWQREAASLRQQLHNLQESHKY 423
>gb|BG054385.1|BG054385 OV2_3_G06.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 377
Score = 133 bits (284), Expect = 8e-030
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +2 / +1
Query: 188 GS*RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRG 367
G R+ MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RG
Sbjct: 139 GGGRAATNMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRG 318
Query: 368 KLYEFGS 388
KLYEF S
Sbjct: 319 KLYEFSS 339
>gb|BF317935.1|BF317935 OV1_9_F09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 551
Score = 132 bits (283), Expect = 1e-029
Identities = 55/93 (59%), Positives = 69/93 (74%)
Frame = +2 / +3
Query: 215 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 394
GRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 228 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 407
Query: 395 ITKTLERYQHCCYNAQDSNGALSETQSWYQEMS 493
+ T+ERY+ + +S + YQ+ S
Sbjct: 408 VKSTIERYKKANSDTSNSGTVAEVSAQHYQQES 506
>gb|BF657695.1|BF657695 OV2_20_F03.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 508
Score = 132 bits (283), Expect = 1e-029
Identities = 55/93 (59%), Positives = 69/93 (74%)
Frame = +2 / +3
Query: 215 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 394
GRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 156 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 335
Query: 395 ITKTLERYQHCCYNAQDSNGALSETQSWYQEMS 493
+ T+ERY+ + +S + YQ+ S
Sbjct: 336 VKSTIERYKKANSDTSNSGTVAEVSAQHYQQES 434
>gb|BG412023.1|BG412023 OV2_37_A12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 507
Score = 132 bits (283), Expect = 1e-029
Identities = 55/93 (59%), Positives = 69/93 (74%)
Frame = +2 / +3
Query: 215 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 394
GRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 132 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 311
Query: 395 ITKTLERYQHCCYNAQDSNGALSETQSWYQEMS 493
+ T+ERY+ + +S + YQ+ S
Sbjct: 312 VKSTIERYKKANSDTSNSGTVAEVSAQHYQQES 410
>gb|CW365810.1|CW365810 fsbb001f038i06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038i06, DNA
sequence
Length = 725
Score = 132 bits (282), Expect = 2e-029
Identities = 57/64 (89%), Positives = 60/64 (93%)
Frame = +2 / -1
Query: 197 RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLY 376
R+ MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLY
Sbjct: 719 RAATNMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLY 540
Query: 377 EFGS 388
EF S
Sbjct: 539 EFSS 528
>gb|CW081771.1|CW081771 104_422_10942807_114_32316_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942807, DNA
sequence
Length = 682
Score = 131 bits (281), Expect = 2e-029
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +2 / -3
Query: 209 AMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
AMGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S
Sbjct: 554 AMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 375
>gb|CW081772.1|CW081772 104_422_10942807_114_32345_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942807, DNA
sequence
Length = 712
Score = 131 bits (281), Expect = 2e-029
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +2 / -3
Query: 209 AMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
AMGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S
Sbjct: 554 AMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 375
>gb|CW344565.1|CW344565 104_847_11488020_148_36203_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488020, DNA
sequence
Length = 575
Score = 131 bits (281), Expect = 2e-029
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +2 / -1
Query: 209 AMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
AMGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S
Sbjct: 185 AMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 6
>gb|BE354988.1|BE354988 DG1_10_H09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 463
Score = 130 bits (279), Expect = 4e-029
Identities = 54/118 (45%), Positives = 75/118 (63%)
Frame = +2 / +2
Query: 197 RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLY 376
RS MGRG++ ++RI+N +RQVTFSKRRNG+ KKA EL +LCDAEV L+IFSS G+LY
Sbjct: 110 RSLTTMGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKARELGILCDAEVGLVIFSSTGRLY 289
Query: 377 EFGSAGITKTLERYQHCCYNAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGE 550
E+ S + ++RY Q +E + W +E + LR + LQ R L+G+
Sbjct: 290 EYASTSMKSVIDRYGRAKEEQQLVANPNTELKFWQREATSLRQQLHNLQENHRQLMGQ 463
>gb|BF657564.1|BF657564 OV2_23_G05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 434
Score = 128 bits (274), Expect = 2e-028
Identities = 51/69 (73%), Positives = 61/69 (88%)
Frame = +2 / +1
Query: 215 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 394
GRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 166 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 345
Query: 395 ITKTLERYQ 421
+ T+ERY+
Sbjct: 346 VKSTIERYK 372
>gb|BG240312.1|BG240312 OV1_20_E03.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 436
Score = 128 bits (274), Expect = 2e-028
Identities = 51/69 (73%), Positives = 61/69 (88%)
Frame = +2 / +2
Query: 215 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 394
GRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 176 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 355
Query: 395 ITKTLERYQ 421
+ T+ERY+
Sbjct: 356 VKSTIERYK 382
>gb|AW745210.1|AW745210 LG1_387_D10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 575
Score = 127 bits (273), Expect = 3e-028
Identities = 52/84 (61%), Positives = 66/84 (78%)
Frame = +2 / +3
Query: 215 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 394
G+G+ E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 291 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 470
Query: 395 ITKTLERYQHCCYNAQDSNGALSE 466
+ T+ERY+ + + G ++E
Sbjct: 471 VKATIERYKKANSDNSSAAGTIAE 542
>gb|BG357712.1|BG357712 OV2_29_D08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 569
Score = 127 bits (273), Expect = 3e-028
Identities = 52/84 (61%), Positives = 66/84 (78%)
Frame = +2 / +3
Query: 215 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 394
G+G+ E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 288 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 467
Query: 395 ITKTLERYQHCCYNAQDSNGALSE 466
+ T+ERY+ + + G ++E
Sbjct: 468 VKATIERYKKANSDNSSAAGTIAE 539
>gb|BG357882.1|BG357882 OV2_31_D08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 540
Score = 127 bits (273), Expect = 3e-028
Identities = 52/84 (61%), Positives = 66/84 (78%)
Frame = +2 / +3
Query: 215 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 394
G+G+ E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 288 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 467
Query: 395 ITKTLERYQHCCYNAQDSNGALSE 466
+ T+ERY+ + + G ++E
Sbjct: 468 VKATIERYKKANSDNSSAAGTIAE 539
>gb|CF486426.1|CF486426 POL1_37_D04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_37_D04_A002 5', mRNA sequence
Length = 679
Score = 101 bits (215), Expect(2) = 7e-028
Identities = 44/73 (60%), Positives = 55/73 (75%)
Frame = +2 / +3
Query: 200 SYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYE 379
S M R R E+KRIE+ RQVTFSKRR GL KKA ELSVLCDA+VALI+FSS GKL +
Sbjct: 225 SAAGMARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSQ 404
Query: 380 FGSAGITKTLERY 418
F S+ + + +++Y
Sbjct: 405 FASSSMNEIIDKY 443
Score = 47.8 bits (98), Expect(2) = 7e-028
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2 / +2
Query: 545 GEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQV 658
GEEL LSV+ELQQLEK LE L + Q K Q +EQ+
Sbjct: 566 GEELEGLSVEELQQLEKNLETGLHRVLQTKDQQFLEQI 679
>gb|BM324399.1|BM324399 PIC1_27_G12.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 561
Score = 101 bits (215), Expect(2) = 1e-027
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +2 / +2
Query: 185 EGS*RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSR 364
E S R +A R R+ ++RI+N RQVTF+KRR GL KKA ELS+LCDAEV L++FS+
Sbjct: 83 EDSKRGTMAGKRERIAIRRIDNLAARQVTFAKRRRGLFKKAEELSILCDAEVGLVVFSAT 262
Query: 365 GKLYEFGSAGITKTLERYQHCCYNAQDS 448
GKL+ F S + + ++RY N Q S
Sbjct: 263 GKLFHFASTSMKQVIDRYDSHSKNLQKS 346
Score = 44.1 bits (90), Expect(2) = 1e-027
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = +2 / +2
Query: 491 SKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQV 658
++L+ + R + GEEL LSV++LQ+LEK LE L + K+Q +++++
Sbjct: 392 ARLKQELAETSLKLRQMRGEELQRLSVQQLQELEKTLESGLGSVLKTKSQKILDEI 559
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,762,438,385
Number of Sequences: 832831
Number of extensions: 29461315
Number of successful extensions: 180195
Number of sequences better than 1.0e-020: 125
length of database: 163,786,556
effective HSP length: 56
effective length of database: 117,148,020
effective search space used: 45336283740
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)