TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2623104.2.3
(1540 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW271205.1|CW271205 104_743_11402872_116_35341_060 Sorgh... 528 e-148
gb|CF480740.1|CF480740 POL1_67_D01.g1_A002 Pollen Sorghum b... 443 e-145
gb|CW309832.1|CW309832 104_798_11469399_116_35733_052 Sorgh... 340 e-142
gb|CF489422.1|CF489422 POL1_57_B05.g1_A002 Pollen Sorghum b... 338 e-135
gb|CW241738.1|CW241738 104_701_11218937_148_37556_079 Sorgh... 483 e-135
gb|CF482996.1|CF482996 POL1_10_C07.g1_A002 Pollen Sorghum b... 227 e-133
gb|CF489932.1|CF489932 POL1_61_B02.g1_A002 Pollen Sorghum b... 288 e-132
gb|CL155266.1|CL155266 104_341_10782005_116_31472_101 Sorgh... 351 e-131
gb|CF487417.1|CF487417 POL1_43_D12.g1_A002 Pollen Sorghum b... 288 e-130
gb|CW323759.1|CW323759 104_818_11476800_148_35909_096 Sorgh... 332 e-129
gb|CW309833.1|CW309833 104_798_11469399_148_35741_052 Sorgh... 417 e-128
gb|CW160105.1|CW160105 104_566_11149707_116_36428_008 Sorgh... 274 e-128
gb|CW312481.1|CW312481 104_802_11470780_116_35783_010 Sorgh... 291 e-127
gb|CF488397.1|CF488397 POL1_49_E07.g1_A002 Pollen Sorghum b... 280 e-125
gb|CF489809.1|CF489809 POL1_59_F04.g1_A002 Pollen Sorghum b... 262 e-124
gb|CF486455.1|CF486455 POL1_37_F12.g1_A002 Pollen Sorghum b... 260 e-124
gb|CF480256.1|CF480256 POL1_64_D11.g1_A002 Pollen Sorghum b... 214 e-123
gb|CF489443.1|CF489443 POL1_57_D04.g1_A002 Pollen Sorghum b... 259 e-123
gb|CF480747.1|CF480747 POL1_67_D09.g1_A002 Pollen Sorghum b... 182 e-121
gb|CF483347.1|CF483347 POL1_21_D07.g1_A002 Pollen Sorghum b... 249 e-119
gb|CF481397.1|CF481397 POL1_71_F02.g1_A002 Pollen Sorghum b... 244 e-119
gb|CL196999.1|CL196999 104_423_10943444_114_32326_070 Sorgh... 421 e-117
gb|CF488060.1|CF488060 POL1_47_C02.g1_A002 Pollen Sorghum b... 237 e-117
gb|CW270778.1|CW270778 104_742_11402626_148_35337_037 Sorgh... 415 e-114
gb|CL155265.1|CL155265 104_341_10782005_114_31471_101 Sorgh... 215 e-110
gb|CF480173.1|CF480173 POL1_64_D11.b1_A002 Pollen Sorghum b... 398 e-110
gb|CW463315.1|CW463315 fsbb001f211n16k0 Sorghum methylation... 211 e-109
gb|BG322873.1|BG322873 EM1_15_B11.b1_A002 Embryo 1 (EM1) So... 396 e-109
gb|CF488665.1|CF488665 POL1_51_A10.g1_A002 Pollen Sorghum b... 246 e-109
gb|BZ423602.1|BZ423602 id51c01.g1 WGS-SbicolorF (DH5a methy... 396 e-109
gb|CF485801.1|CF485801 POL1_33_F06.g1_A002 Pollen Sorghum b... 338 e-108
gb|CF487334.1|CF487334 POL1_43_D12.b1_A002 Pollen Sorghum b... 386 e-106
gb|CF489185.1|CF489185 POL1_55_F02.b1_A002 Pollen Sorghum b... 382 e-105
gb|CF486033.1|CF486033 POL1_35_F09.b1_A002 Pollen Sorghum b... 378 e-104
gb|CF486111.1|CF486111 POL1_35_F09.g1_A002 Pollen Sorghum b... 190 e-102
gb|CL187602.1|CL187602 104_403_10901000_116_32464_026 Sorgh... 273 e-101
gb|CF483650.1|CF483650 POL1_23_F06.g1_A002 Pollen Sorghum b... 190 e-100
gb|CW160106.1|CW160106 104_566_11149707_148_36427_008 Sorgh... 342 2e-099
gb|BG411749.1|BG411749 OV2_37_E12.g1_A002 Ovary 2 (OV2) Sor... 360 1e-098
gb|CW330184.1|CW330184 104_827_11480239_148_36008_032 Sorgh... 361 1e-098
gb|BG355410.1|BG355410 EM1_16_B04.b1_A002 Embryo 1 (EM1) So... 356 5e-097
gb|CF485728.1|CF485728 POL1_33_F06.b1_A002 Pollen Sorghum b... 355 9e-097
gb|CF489342.1|CF489342 POL1_57_B05.b1_A002 Pollen Sorghum b... 353 1e-096
gb|CF481344.1|CF481344 POL1_71_A04.g1_A002 Pollen Sorghum b... 188 1e-095
gb|CW323366.1|CW323366 104_817_11476592_148_35963_024 Sorgh... 282 4e-094
gb|CF484527.1|CF484527 POL1_25_H01.g1_A002 Pollen Sorghum b... 190 6e-094
gb|BG412065.1|BG412065 OV2_37_E12.b1_A002 Ovary 2 (OV2) Sor... 344 2e-093
gb|CL149387.1|CL149387 104_330_10777794_114_31353_114 Sorgh... 231 5e-091
gb|BH246023.1|BH246023 pSB1633.1 S. bicolor BTx623 PstI-dig... 335 1e-090
gb|CF480188.1|CF480188 POL1_64_G01.b1_A002 Pollen Sorghum b... 308 5e-090
gb|CL165002.1|CL165002 104_359_10808294_114_31816_278 Sorgh... 330 1e-089
gb|CW333143.1|CW333143 104_831_11481784_148_36046_064 Sorgh... 266 1e-089
gb|CW258561.1|CW258561 104_724_11227944_148_35167_088 Sorgh... 278 2e-089
gb|CF481389.1|CF481389 POL1_71_E06.g1_A002 Pollen Sorghum b... 172 5e-088
gb|CW182308.1|CW182308 104_597_11164002_116_36658_067 Sorgh... 319 7e-086
gb|CF484989.1|CF484989 POL1_28_F08.g1_A002 Pollen Sorghum b... 190 6e-085
gb|CW330183.1|CW330183 104_827_11480239_116_36007_032 Sorgh... 308 2e-082
gb|CL187601.1|CL187601 104_403_10901000_114_32460_026 Sorgh... 278 9e-082
gb|CF486235.1|CF486235 POL1_36_C04.g1_A002 Pollen Sorghum b... 190 4e-080
gb|CW446664.1|CW446664 fsbb001f179g22f0 Sorghum methylation... 289 3e-079
gb|CF480656.1|CF480656 POL1_67_D01.b1_A002 Pollen Sorghum b... 181 2e-078
gb|CF490094.1|CF490094 POL1_62_A05.g1_A002 Pollen Sorghum b... 255 5e-077
gb|CF486155.1|CF486155 POL1_36_C04.b1_A002 Pollen Sorghum b... 284 6e-076
gb|CF481701.1|CF481701 POL1_73_B09.g1_A002 Pollen Sorghum b... 190 8e-076
gb|CF490015.1|CF490015 POL1_62_A05.b1_A002 Pollen Sorghum b... 184 2e-075
gb|CF483278.1|CF483278 POL1_21_D07.b1_A002 Pollen Sorghum b... 172 2e-072
gb|CL197000.1|CL197000 104_423_10943444_116_32330_070 Sorgh... 273 4e-072
gb|CW406843.1|CW406843 fsbb001f100a22k0 Sorghum methylation... 167 4e-072
gb|BG239833.1|BG239833 OV1_29_F03.g1_A002 Ovary 1 (OV1) Sor... 271 6e-072
gb|BG240402.1|BG240402 OV1_29_F03.b1_A002 Ovary 1 (OV1) Sor... 271 6e-072
gb|CF480280.1|CF480280 POL1_64_G01.g1_A002 Pollen Sorghum b... 147 6e-071
gb|CF485486.1|CF485486 POL1_31_G04.g1_A002 Pollen Sorghum b... 190 2e-070
gb|CW494638.1|CW494638 fsbb001f286a15k0 Sorghum methylation... 210 6e-070
gb|CW217188.1|CW217188 104_650_11195523_116_37129_010 Sorgh... 149 2e-069
gb|CF485402.1|CF485402 POL1_31_G04.b1_A002 Pollen Sorghum b... 230 2e-064
gb|CW043621.1|CW043621 104_279_10508479_114_30273 Sorghum m... 247 3e-064
gb|CF484792.1|CF484792 POL1_27_B10.g1_A002 Pollen Sorghum b... 149 3e-061
gb|CF481307.1|CF481307 POL1_71_E06.b1_A002 Pollen Sorghum b... 232 4e-060
gb|CF489359.1|CF489359 POL1_57_D04.b1_A002 Pollen Sorghum b... 230 1e-059
gb|CF488593.1|CF488593 POL1_51_A10.b1_A002 Pollen Sorghum b... 228 5e-059
gb|CF487982.1|CF487982 POL1_47_C02.b1_A002 Pollen Sorghum b... 228 5e-059
gb|CF480663.1|CF480663 POL1_67_D09.b1_A002 Pollen Sorghum b... 229 8e-059
gb|CF481619.1|CF481619 POL1_73_B09.b1_A002 Pollen Sorghum b... 228 1e-058
gb|CF489851.1|CF489851 POL1_61_B02.b1_A002 Pollen Sorghum b... 225 1e-057
gb|CF481930.1|CF481930 POL1_75_E11.b1_A002 Pollen Sorghum b... 224 3e-057
gb|CF481975.1|CF481975 POL1_75_D02.g1_A002 Pollen Sorghum b... 190 3e-055
gb|CF481916.1|CF481916 POL1_75_D02.b1_A002 Pollen Sorghum b... 215 4e-055
gb|CF482926.1|CF482926 POL1_10_C07.b1_A002 Pollen Sorghum b... 191 1e-053
gb|BG739374.1|BG739374 EM1_82_B09.g1_A002 Embryo 1 (EM1) So... 126 1e-053
gb|CW197885.1|CW197885 104_622_11181920_148_36831_026 Sorgh... 208 5e-053
gb|CF486365.1|CF486365 POL1_37_F12.b1_A002 Pollen Sorghum b... 199 5e-053
gb|CW463314.1|CW463314 fsbb001f211n16f0 Sorghum methylation... 139 9e-053
gb|CW097817.1|CW097817 104_464_11002670_148_34365_061 Sorgh... 201 2e-050
gb|CW245686.1|CW245686 104_706_11221077_148_35074_085 Sorgh... 201 2e-050
gb|CW245687.1|CW245687 104_706_11221077_148_37594_085 Sorgh... 201 2e-050
gb|BZ422085.1|BZ422085 id49d07.b1 WGS-SbicolorF (DH5a methy... 199 7e-050
gb|CW237483.1|CW237483 104_693_11216193_148_37517_033 Sorgh... 199 7e-050
gb|BZ422208.1|BZ422208 id51a01.b1 WGS-SbicolorF (DH5a methy... 199 1e-049
gb|BG323126.1|BG323126 EM1_15_B11.g1_A002 Embryo 1 (EM1) So... 199 1e-049
gb|CF489718.1|CF489718 POL1_59_F04.b1_A002 Pollen Sorghum b... 166 3e-049
gb|CW390139.1|CW390139 fsbb001f075k21k0 Sorghum methylation... 196 6e-049
gb|BG739541.1|BG739541 EM1_82_B09.b1_A002 Embryo 1 (EM1) So... 150 2e-048
gb|CL196651.1|CL196651 104_423_10943198_116_32330_063 Sorgh... 194 2e-048
gb|CW039367.1|CW039367 104_272_10505460_115_30390 Sorghum m... 191 2e-047
gb|CL165003.1|CL165003 104_359_10808294_116_31817_278 Sorgh... 171 5e-046
gb|CW333142.1|CW333142 104_831_11481784_116_36045_064 Sorgh... 126 5e-044
gb|CW401940.1|CW401940 fsbb001f093a03f0 Sorghum methylation... 87 2e-043
gb|CW260257.1|CW260257 104_726_11228865_148_35188_033 Sorgh... 163 2e-042
gb|CL196650.1|CL196650 104_423_10943198_114_32326_063 Sorgh... 155 2e-041
gb|CF481922.1|CF481922 POL1_75_D09.b1_A002 Pollen Sorghum b... 167 8e-041
gb|CW241737.1|CW241737 104_701_11218937_116_37555_079 Sorgh... 165 4e-040
gb|CL149388.1|CL149388 104_330_10777794_116_31354_114 Sorgh... 109 8e-040
gb|CW346939.1|CW346939 fsbb001f006k08f0 Sorghum methylation... 109 8e-040
gb|CW299046.1|CW299046 104_781_11462903_116_35658_082 Sorgh... 109 8e-040
gb|CW217189.1|CW217189 104_650_11195523_148_37130_010 Sorgh... 151 2e-039
gb|CW406842.1|CW406842 fsbb001f100a22f0 Sorghum methylation... 109 4e-039
gb|CW036659.1|CW036659 104_268_10503899_114_30381 Sorghum m... 159 5e-039
gb|BI098442.1|BI098442 IP1_32_D12.b1_A002 Immature pannicle... 140 6e-039
gb|CW299047.1|CW299047 104_781_11462903_148_35654_082 Sorgh... 109 7e-039
gb|CL191437.1|CL191437 104_410_10906802_116_32537_007 Sorgh... 140 3e-037
gb|CF481266.1|CF481266 POL1_71_A04.b1_A002 Pollen Sorghum b... 152 1e-036
gb|CW323365.1|CW323365 104_817_11476592_116_35962_024 Sorgh... 149 2e-036
gb|CW194908.1|CW194908 104_618_11180352_148_36800_092 Sorgh... 122 3e-036
gb|CW145709.1|CW145709 104_538_11138608_148_34981_058 Sorgh... 122 2e-035
gb|CW320260.1|CW320260 104_813_11474922_116_35901_077 Sorgh... 103 2e-035
gb|CD213604.1|CD213604 HS1_52_B12.b1_A012 Heat-shocked seed... 87 2e-034
gb|CD462003.1|CD462003 SA1_36_H06.b1_A002 Salicylic acid-tr... 87 2e-034
gb|BE597262.1|BE597262 PI1_70_B02.g1_A002 Pathogen induced ... 87 2e-034
gb|CW102281.1|CW102281 104_470_11011256_148_34413_024 Sorgh... 147 4e-034
gb|CW231979.1|CW231979 104_681_11211414_148_37350_023 Sorgh... 122 5e-034
gb|CW070897.1|CW070897 104_323_10591301_114_30471 Sorghum m... 88 2e-033
gb|BG240550.1|BG240550 OV1_31_D01.b1_A002 Ovary 1 (OV1) Sor... 144 2e-033
gb|CF482113.1|CF482113 POL1_76_F02.g1_A002 Pollen Sorghum b... 90 4e-033
gb|CW181409.1|CW181409 104_596_11163492_116_36654_042 Sorgh... 126 5e-033
gb|CW320261.1|CW320261 104_813_11474922_148_35897_077 Sorgh... 79 1e-032
gb|CW264408.1|CW264408 104_733_11231276_116_35256_078 Sorgh... 115 2e-032
gb|CW461512.1|CW461512 fsbb001f209d11f0 Sorghum methylation... 109 1e-031
gb|CL175908.1|CL175908 104_381_10892772_148_31764_372 Sorgh... 81 1e-031
gb|CW191731.1|CW191731 104_613_11178652_148_36941_002 Sorgh... 81 1e-031
gb|CW369343.1|CW369343 fsbb001f043l11k0 Sorghum methylation... 138 3e-031
gb|CW346940.1|CW346940 fsbb001f006k08k0 Sorghum methylation... 109 2e-030
gb|CW086368.1|CW086368 104_430_10946932_116_33018_012 Sorgh... 86 2e-030
gb|BI098131.1|BI098131 IP1_32_D12.g1_A002 Immature pannicle... 87 5e-030
gb|CW215045.1|CW215045 104_647_11194336_148_37163_060 Sorgh... 133 1e-029
gb|CL175907.1|CL175907 104_381_10892772_116_31765_372 Sorgh... 72 1e-029
gb|CW231978.1|CW231978 104_681_11211414_116_37346_023 Sorgh... 100 1e-029
gb|CW030834.1|CW030834 104_259_10500452_116_30398 Sorghum m... 89 5e-028
gb|CF480287.1|CF480287 POL1_64_G08.g1_A002 Pollen Sorghum b... 79 5e-028
gb|CW327366.1|CW327366 104_823_11478707_148_35980_048 Sorgh... 124 3e-027
gb|CD212571.1|CD212571 HS1_6_F12.b1_A012 Heat-shocked seedl... 87 1e-026
gb|CW346335.1|CW346335 104_849_11488970_116_36220_003 Sorgh... 120 5e-026
gb|CW133225.1|CW133225 104_516_11116645_116_34806_049 Sorgh... 107 2e-025
gb|CF488327.1|CF488327 POL1_49_E07.b1_A002 Pollen Sorghum b... 118 2e-025
gb|CF430289.1|CF430289 PH1_27_G01.b1_A002 Phosphorous-defic... 65 4e-025
gb|CW473599.1|CW473599 fsbb001f229a17k0 Sorghum methylation... 72 1e-024
gb|CW072348.1|CW072348 104_325_10592218_114_30536 Sorghum m... 73 1e-024
gb|CW181410.1|CW181410 104_596_11163492_148_36653_042 Sorgh... 69 1e-024
gb|CW032166.1|CW032166 104_261_10501225_114_30363 Sorghum m... 115 2e-024
gb|CW394746.1|CW394746 fsbb001f082h21k0 Sorghum methylation... 114 4e-024
gb|CW279013.1|CW279013 104_753_11406855_116_35427_054 Sorgh... 98 5e-024
gb|CW279015.1|CW279015 104_753_11406856_116_35428_054 Sorgh... 98 5e-024
gb|CW208653.1|CW208653 104_638_11188789_148_36982_059 Sorgh... 111 2e-023
gb|CW233309.1|CW233309 104_686_11213332_148_37371_008 Sorgh... 111 2e-023
gb|CW194907.1|CW194907 104_618_11180352_116_36796_092 Sorgh... 76 2e-022
gb|CW191730.1|CW191730 104_613_11178652_116_36942_002 Sorgh... 81 3e-022
gb|CW232350.1|CW232350 104_685_11212772_116_37364_080 Sorgh... 87 4e-022
gb|CF488802.1|CF488802 POL1_52_G02.b1_A002 Pollen Sorghum b... 107 4e-022
gb|CF481907.1|CF481907 POL1_75_C02.b1_A002 Pollen Sorghum b... 107 5e-022
gb|CX609536.1|CX609536 ANR1_13_F11.b1_A002 Anaerobic roots ... 96 7e-022
gb|BG355623.1|BG355623 EM1_16_B04.g1_A002 Embryo 1 (EM1) So... 105 2e-021
gb|CW412966.1|CW412966 fsbb001f108o03f0 Sorghum methylation... 56 7e-021
gb|BG048591.1|BG048591 OV1_14_E10.b1_A002 Ovary 1 (OV1) Sor... 100 8e-021
gb|CF481314.1|CF481314 POL1_71_F02.b1_A002 Pollen Sorghum b... 100 8e-021
gb|BG048519.1|BG048519 OV1_14_E10.g2_A002 Ovary 1 (OV1) Sor... 100 8e-021
>gb|CW271205.1|CW271205 104_743_11402872_116_35341_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402872, DNA
sequence
Length = 709
Score = 528 bits (1146), Expect = e-148
Identities = 212/235 (90%), Positives = 229/235 (97%)
Frame = +2 / +3
Query: 419 LVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNM 598
LVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGITLLN+KFFHMN+
Sbjct: 3 LVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNV 182
Query: 599 YKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITG 778
++CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVTI NTVIGVGDDCISIGPGT+KVNITG
Sbjct: 183 FQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVNITG 362
Query: 779 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASKIHYE 958
VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT+NG+RIKAYEDAASVLTASKIHYE
Sbjct: 363 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYE 542
Query: 959 NIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNLLC 1123
NIKMEDS PIIIDMKYCPNK+CTA+GASKVT +DV+FKN+TGTS++PEAV+LLC
Sbjct: 543 NIKMEDSSNPIIIDMKYCPNKICTASGASKVTRQDVSFKNVTGTSASPEAVSLLC 707
Score = 461 bits (1001), Expect = e-128
Identities = 202/236 (85%), Positives = 210/236 (88%)
Frame = -2 / -1
Query: 1125 EQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WI 946
EQSRLTASG+ EVPV FLK TS VTLEAPLAV LLGQYFMSM+MG ESSIL+FS*WI
Sbjct: 709 EQSRLTASGLAEVPVTFLKETS*RVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WI 530
Query: 945 LEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMF 766
LEAVSTEAASSYAL+R PL VF SVQS TL+SVTSFSSLYRPRLPMLMPWPGP VTPVMF
Sbjct: 529 LEAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMF 350
Query: 765 TLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMW 586
TL VPGPMEMQSSPTPMTV MVTPDESPMWMPSVLGLSPGAVT+TSLI+MSLH FMW
Sbjct: 349 TLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMW 170
Query: 585 KNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTR 418
KNL SSVIPDTSPLFT S TSELGRILQSYFL EFLLHTAGPCPSSFPLPV+TR
Sbjct: 169 KNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITR 2
Score = 161 bits (347), Expect(2) = 1e-071
Identities = 68/86 (79%), Positives = 72/86 (83%)
Frame = +1 / +2
Query: 418 PCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHAAQLQVLPHEH 597
P HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHAA+ QVLPHE
Sbjct: 2 PGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHAAKRQVLPHER 181
Query: 598 VQVQGHADQGRQCDGARGQPQHGRHP 675
V VQGH D G GARGQPQHGRHP
Sbjct: 182 VPVQGHVD*GCDGHGARGQPQHGRHP 259
Score = 134 bits (287), Expect(2) = 1e-071
Identities = 56/71 (78%), Positives = 62/71 (87%)
Frame = +1 / +2
Query: 823 AVQGREGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL*EYQDGGLGLPHHHRH 1002
AVQGREGRHG+QR+GL+A ED QR P QGV GRRLRAHRLQDPL*E+QDGGL PH+HRH
Sbjct: 407 AVQGREGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRH 586
Query: 1003 EVLPQQVMHRQ 1035
EVLP Q +HRQ
Sbjct: 587 EVLP*QNLHRQ 619
Score = 69.8 bits (146), Expect(3) = 2e-032
Identities = 30/48 (62%), Positives = 31/48 (64%)
Frame = -1 / -3
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGD 425
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD
Sbjct: 152 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGD 9
Score = 69.8 bits (146), Expect(3) = 2e-032
Identities = 38/69 (55%), Positives = 38/69 (55%)
Frame = -3 / -2
Query: 1028 CITCWGSTSCR**WGXXXXXXXXXXXXSWXXXXXXXRPHTP*CGRRWPSS*ACSP*R*YP 849
C C GSTSCR**WG SW RP TP* G R SS A SP R* P
Sbjct: 612 CRFC*GSTSCR**WGSTSPPS*CSHSGSWRR*ARRRRPRTP*SGGRCSSSSAYSPSR*CP 433
Query: 848 *RPSRPCTA 822
*RPSRPCTA
Sbjct: 432 *RPSRPCTA 406
Score = 45.5 bits (93), Expect(3) = 2e-032
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / -3
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 272 RVAHVDAVRVGAVPGRRDRHILNQ 201
>gb|CF480740.1|CF480740 POL1_67_D01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_D01_A002 5', mRNA sequence
Length = 692
Score = 443 bits (962), Expect(2) = e-145
Identities = 178/190 (93%), Positives = 187/190 (98%)
Frame = +2 / +2
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 122 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 301
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISI 745
LLN+KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVTI NTVIGVGDDCISI
Sbjct: 302 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 481
Query: 746 GPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAA 925
GPGT+KVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT+NG+RIKAYEDAA
Sbjct: 482 GPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAA 661
Query: 926 SVLTASKIHY 955
SVLTASKIHY
Sbjct: 662 SVLTASKIHY 691
Score = 392 bits (851), Expect(2) = e-129
Identities = 168/190 (88%), Positives = 173/190 (91%)
Frame = -2 / -3
Query: 954 *WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTP 775
*WILEAVSTEAASSYAL+R PL VF SVQS TL+SVTSFSSLYRPRLPMLMPWPGP VTP
Sbjct: 690 *WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTP 511
Query: 774 VMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYM 595
VMFTL VPGPMEMQSSPTPMTV MVTPDESPMWMPSVLGLSPGAVT+TSLI+MSLH
Sbjct: 510 VMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNT 331
Query: 594 FMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRL 415
FMWKNL SSVIPDTSPLFT S TSELGRILQSYFL EFLLHTAGPCPSSFPLPV+TRL
Sbjct: 330 FMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRL 151
Query: 414 STRRISIQLP 385
STRRISIQLP
Sbjct: 150 STRRISIQLP 121
Score = 175 bits (376), Expect(3) = 2e-083
Identities = 75/96 (78%), Positives = 79/96 (82%)
Frame = +1 / +1
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 124 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 303
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
A+ QVLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 304 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 411
Score = 96.4 bits (204), Expect(2) = e-145
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = +2 / +2
Query: 260 LIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYK 379
LIPKGD+LVGPLNFTGPCKGDVTIQV+GNLLATTDLSQYK
Sbjct: 2 LIPKGDYLVGPLNFTGPCKGDVTIQVDGNLLATTDLSQYK 121
Score = 95.5 bits (202), Expect(3) = 2e-083
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = +1 / +1
Query: 259 PHPQGRLPRRTTQLHRPMQGRRDHPGEWQSAGDHGPKPVQG 381
PHP GRLPRRTTQLHRP+QGRRDHPG QSAGDHGP+PVQG
Sbjct: 1 PHP*GRLPRRTTQLHRPVQGRRDHPGGRQSAGDHGPEPVQG 123
Score = 93.6 bits (198), Expect(2) = e-129
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = -2 / -3
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMR 259
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMR
Sbjct: 120 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMR 1
Score = 91.3 bits (193), Expect(4) = 9e-049
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / -2
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 304 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 125
Query: 388 TMIL 377
T++L
Sbjct: 124 TLVL 113
Score = 86.3 bits (182), Expect(3) = 2e-083
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = +1 / +1
Query: 823 AVQGREGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL 954
AVQGREGRHG+QR+GL+A ED QR P QGV GRRLRAHRLQDPL
Sbjct: 559 AVQGREGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL 690
Score = 75.3 bits (158), Expect(4) = 9e-049
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = -1 / -2
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDE 260
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DE
Sbjct: 121 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDE 2
Score = 68.9 bits (144), Expect(3) = 2e-021
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +3
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 123 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 251
Score = 47.8 bits (98), Expect(3) = 2e-021
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +3
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 57 RAT*PSRWTAICWRPRT*ASTRV 125
Score = 47.3 bits (97), Expect(4) = 9e-049
Identities = 25/41 (60%), Positives = 25/41 (60%)
Frame = -3 / -1
Query: 944 WXXXXXXXRPHTP*CGRRWPSS*ACSP*R*YP*RPSRPCTA 822
W RP TP* G R SS A SP R* P*RPSRPCTA
Sbjct: 680 WRR*ARRRRPRTP*SGGRCSSSSAYSPSR*CP*RPSRPCTA 558
Score = 45.5 bits (93), Expect(4) = 9e-049
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / -2
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 424 RVAHVDAVRVGAVPGRRDRHILNQ 353
Score = 30.9 bits (61), Expect(3) = 2e-021
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 384 GTAPTRTASTW 416
>gb|CW309832.1|CW309832 104_798_11469399_116_35733_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469399, DNA
sequence
Length = 701
Score = 340 bits (737), Expect(2) = e-142
Identities = 135/145 (93%), Positives = 142/145 (97%)
Frame = +2 / +1
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 265 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 444
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISI 745
LLN+KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVTI NTVIGVGDDCISI
Sbjct: 445 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 624
Query: 746 GPGTSKVNITGVTCGPGHGISIGSL 820
GPGT+KVNITGVTCGPGHGISIGSL
Sbjct: 625 GPGTTKVNITGVTCGPGHGISIGSL 699
Score = 305 bits (661), Expect(2) = e-132
Identities = 129/146 (88%), Positives = 132/146 (90%)
Frame = -2 / -1
Query: 822 PRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPG 643
PRLPMLMP PGP VTPVMFTL VPGPMEMQSSPTPMTV MVTPDESPMWMPSVLGLSPG
Sbjct: 701 PRLPMLMPCPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPG 522
Query: 642 AVTLTSLISMSLHLYMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHT 463
AVT+TSLI+MSLH FMWKNL SSVIPDTSPLFT S TSELGRILQSYFL EFLLHT
Sbjct: 521 AVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHT 342
Query: 462 AGPCPSSFPLPVMTRLSTRRISIQLP 385
AGPCPSSFPLPV+TRLSTRRISIQLP
Sbjct: 341 AGPCPSSFPLPVITRLSTRRISIQLP 264
Score = 190 bits (410), Expect(2) = e-132
Identities = 76/83 (91%), Positives = 77/83 (92%)
Frame = -2 / -1
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAFV
Sbjct: 263 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFV 84
Query: 198 LSVLPLPEAPNLVMSKDPPGPDA 130
LS LP PEAPNL+MS DPPGPDA
Sbjct: 83 LSFLPSPEAPNLLMSNDPPGPDA 15
Score = 187 bits (402), Expect(2) = e-142
Identities = 75/81 (92%), Positives = 79/81 (97%)
Frame = +2 / +1
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVGPLNFTGPCK
Sbjct: 22 GPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCK 201
Query: 317 GDVTIQVNGNLLATTDLSQYK 379
GDVTIQV+GNLLATTDLSQYK
Sbjct: 202 GDVTIQVDGNLLATTDLSQYK 264
Score = 175 bits (376), Expect(2) = 4e-086
Identities = 75/96 (78%), Positives = 79/96 (82%)
Frame = +1 / +3
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 267 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 446
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
A+ QVLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 447 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 554
Score = 166 bits (356), Expect(2) = 4e-086
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +3
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPM 312
VRA V+RH QVGRL + Q+G HEGCAGG+ +GVRRHREADDPHP GRLPRRTTQLHRP+
Sbjct: 18 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 197
Query: 313 QGRRDHPGEWQSAGDHGPKPVQG 381
QGRRDHPG QSAGDHGP+PVQG
Sbjct: 198 QGRRDHPGGRQSAGDHGPEPVQG 266
Score = 116 bits (248), Expect(3) = 3e-054
Identities = 56/83 (67%), Positives = 57/83 (68%)
Frame = -1 / -3
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCPXXXXXXX 200
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 264 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHSLR 85
Query: 199 XXXXXXXXXAQLGDVEGPTGPGR 131
AQL DVE P PGR
Sbjct: 84 AVLLAVAGGAQLADVERPARPGR 16
Score = 91.3 bits (193), Expect(3) = 3e-054
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / -3
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 447 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 268
Query: 388 TMIL 377
T++L
Sbjct: 267 TLVL 256
Score = 68.9 bits (144), Expect(4) = 7e-025
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +2
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 266 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 394
Score = 68.4 bits (143), Expect(2) = 2e-023
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / -2
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRRTP PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 127 CRRTPTSMPPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 8
Score = 63.4 bits (132), Expect(2) = 2e-023
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -2
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 265 PCTGSGPWSPADCRPPGWSRRPC 197
Score = 47.8 bits (98), Expect(4) = 7e-025
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +2
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 200 RAT*PSRWTAICWRPRT*ASTRV 268
Score = 45.5 bits (93), Expect(3) = 3e-054
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / -3
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 567 RVAHVDAVRVGAVPGRRDRHILNQ 496
Score = 30.9 bits (61), Expect(4) = 7e-025
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +2
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 527 GTAPTRTASTW 559
Score = 30.4 bits (60), Expect(4) = 7e-025
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +2
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 11 KRRPGLAGRSTSASWAP 61
>gb|CF489422.1|CF489422 POL1_57_B05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_B05_A002 5', mRNA sequence
Length = 715
Score = 338 bits (733), Expect(3) = e-135
Identities = 134/144 (93%), Positives = 141/144 (97%)
Frame = +2 / +2
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 284 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 463
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISI 745
LLN+KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVTI NTVIGVGDDCISI
Sbjct: 464 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 643
Query: 746 GPGTSKVNITGVTCGPGHGISIGS 817
GPGT+KVNITGVTCGPGHGISIGS
Sbjct: 644 GPGTTKVNITGVTCGPGHGISIGS 715
Score = 306 bits (662), Expect(3) = e-125
Identities = 128/144 (88%), Positives = 131/144 (90%)
Frame = -2 / -2
Query: 816 LPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAV 637
LPMLMPWPGP VTPVMFTL VPGPMEMQSSPTPMTV MVTPDESPMWMPSVLGLSPGAV
Sbjct: 714 LPMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAV 535
Query: 636 TLTSLISMSLHLYMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAG 457
T+TSLI+MSLH FMWKNL SSVIPDTSPLFT S TSELGRILQSYFL EFLLHTAG
Sbjct: 534 TVTSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAG 355
Query: 456 PCPSSFPLPVMTRLSTRRISIQLP 385
PCPSSFPLPV+TRLSTRRISIQLP
Sbjct: 354 PCPSSFPLPVITRLSTRRISIQLP 283
Score = 175 bits (376), Expect(3) = 2e-084
Identities = 75/96 (78%), Positives = 79/96 (82%)
Frame = +1 / +1
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 286 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 465
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
A+ QVLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 466 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 573
Score = 147 bits (316), Expect(3) = e-125
Identities = 59/62 (95%), Positives = 59/62 (95%)
Frame = -2 / -2
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAFV
Sbjct: 282 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFV 103
Query: 198 LS 193
LS
Sbjct: 102 LS 97
Score = 147 bits (316), Expect(3) = e-135
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +2 / +2
Query: 194 DSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQ 373
DSTKAVQEAW SACGGTGKQTILIPKGD+LVGPLNFTGPCKGDVTIQV+GNLLATTDLSQ
Sbjct: 98 DSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQVDGNLLATTDLSQ 277
Query: 374 YK 379
YK
Sbjct: 278 YK 283
Score = 143 bits (307), Expect(3) = 2e-084
Identities = 54/64 (84%), Positives = 59/64 (92%)
Frame = +1 / +1
Query: 190 DG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPMQGRRDHPGEWQSAGDHGPK 369
+G HEGCAGG+ +GVRRHREADDPHP GRLPRRTTQLHRP+QGRRDHPG QSAGDHGP+
Sbjct: 94 EGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPVQGRRDHPGGRQSAGDHGPE 273
Query: 370 PVQG 381
PVQG
Sbjct: 274 PVQG 285
Score = 101 bits (216), Expect(4) = 8e-059
Identities = 46/53 (86%), Positives = 47/53 (88%)
Frame = -1 / -1
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCP 221
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 283 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRP 125
Score = 91.3 bits (193), Expect(4) = 8e-059
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / -1
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 466 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 287
Query: 388 TMIL 377
T++L
Sbjct: 286 TLVL 275
Score = 68.9 bits (144), Expect(4) = 5e-025
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +3
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 285 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 413
Score = 48.3 bits (99), Expect(4) = 8e-059
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -3 / -3
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPT 165
CRRTP PPAQPSC PS H +RR T
Sbjct: 146 CRRTPTSMPPAQPSCCPSQHARRRRT 69
Score = 47.8 bits (98), Expect(4) = 5e-025
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +3
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 219 RAT*PSRWTAICWRPRT*ASTRV 287
Score = 45.5 bits (93), Expect(4) = 8e-059
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / -1
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 586 RVAHVDAVRVGAVPGRRDRHILNQ 515
Score = 39.1 bits (79), Expect(3) = e-135
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +2
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 23 KMACTGNAMRAFFLLAFVCAAH 88
Score = 36.8 bits (74), Expect(3) = e-125
Identities = 16/28 (57%), Positives = 16/28 (57%)
Frame = -3 / -3
Query: 116 PLTLPSHHARCRRALEGTRLSLHCLYMP 33
P PS HAR RR G RLS HCL P
Sbjct: 110 PSCCPSQHARRRRTPGGRRLSSHCLCTP 27
Score = 36.3 bits (73), Expect(3) = 2e-084
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +1 / +1
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGKVKG 117
+ ++G++RQC+ESL+P L RA EG+ +G
Sbjct: 16 TNKNGVHRQCDESLLPPGVRLRRACWEGQHEG 111
Score = 30.9 bits (61), Expect(4) = 5e-025
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 546 GTAPTRTASTW 578
Score = 30.9 bits (61), Expect(4) = 5e-025
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3 / +3
Query: 30 RWHV*TMQ*EPCSF*RSSAPCMVRRQSQR 116
+W M+*EP S RSSAP M+ R ++R
Sbjct: 24 KWRAQAMR*EPSSSWRSSAPRMLGRTARR 110
>gb|CW241738.1|CW241738 104_701_11218937_148_37556_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218937, DNA
sequence
Length = 656
Score = 483 bits (1048), Expect = e-135
Identities = 194/218 (88%), Positives = 211/218 (96%)
Frame = +2 / +1
Query: 578 KFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGT 757
KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVTI NTVIGVGDDCISIGPGT
Sbjct: 1 KFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPGT 180
Query: 758 SKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLT 937
+KVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT+NG+RIKAYEDAASVLT
Sbjct: 181 TKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLT 360
Query: 938 ASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNL 1117
ASKIHYENIKMEDS PIIIDMKYCPNK+CTA+GASKVTVKDV+FKN+TGTS++PEAV+L
Sbjct: 361 ASKIHYENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSASPEAVSL 540
Query: 1118 LCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSA 1231
LCS KIPCTGVTMD+V ++YSG NNKTMAVC+NAKGSA
Sbjct: 541 LCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQNAKGSA 654
Score = 396 bits (860), Expect = e-109
Identities = 177/218 (81%), Positives = 186/218 (85%)
Frame = -2 / -1
Query: 1233 LALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVPVMFLKVTSLT 1054
+ALPLAF HTA LT SMVTPV GIL+EQSRLTASG+ EVPV FLK TSLT
Sbjct: 656 VALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPVTFLKETSLT 477
Query: 1053 VTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLS 874
VTLEAPLAV LLGQYFMSM+MG ESSIL+FS*WILEAVSTEAASSYAL+R PL VF S
Sbjct: 476 VTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFS 297
Query: 873 VQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVT 694
VQS TL+SVTSFSSLYRPRLPMLMPWPGP VTPVMFTL VPGPMEMQSSPTPMTV MVT
Sbjct: 296 VQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVT 117
Query: 693 PDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKN 580
PDESPMWMPSVLGLSPGAVT+TSLI+MSLH FMWKN
Sbjct: 116 PDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKN 3
Score = 134 bits (287), Expect(4) = 4e-048
Identities = 56/71 (78%), Positives = 62/71 (87%)
Frame = +1 / +3
Query: 823 AVQGREGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL*EYQDGGLGLPHHHRH 1002
AVQGREGRHG+QR+GL+A ED QR P QGV GRRLRAHRLQDPL*E+QDGGL PH+HRH
Sbjct: 246 AVQGREGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRH 425
Query: 1003 EVLPQQVMHRQ 1035
EVLP Q +HRQ
Sbjct: 426 EVLP*QNLHRQ 458
Score = 69.8 bits (146), Expect(3) = 4e-024
Identities = 38/69 (55%), Positives = 38/69 (55%)
Frame = -3 / -2
Query: 1028 CITCWGSTSCR**WGXXXXXXXXXXXXSWXXXXXXXRPHTP*CGRRWPSS*ACSP*R*YP 849
C C GSTSCR**WG SW RP TP* G R SS A SP R* P
Sbjct: 451 CRFC*GSTSCR**WGSTSPPS*CSHSGSWRR*ARRRRPRTP*SGGRCSSSSAYSPSR*CP 272
Query: 848 *RPSRPCTA 822
*RPSRPCTA
Sbjct: 271 *RPSRPCTA 245
Score = 61.1 bits (127), Expect(4) = 4e-048
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +1 / +3
Query: 580 VLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
VLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 3 VLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 98
Score = 45.5 bits (93), Expect(3) = 4e-024
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / -3
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 111 RVAHVDAVRVGAVPGRRDRHILNQ 40
Score = 41.4 bits (84), Expect(3) = 4e-024
Identities = 20/39 (51%), Positives = 21/39 (53%)
Frame = -1 / -3
Query: 1231 GAALSVLAYGHXXXXXXXXXXXXXVHGDAGAWDLGRAEQ 1115
GAAL VLAYGH +HGDA A DL AEQ
Sbjct: 654 GAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAEQ 538
Score = 32.7 bits (65), Expect(4) = 4e-048
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3 / +2
Query: 1194 RPWPYARTLRAAP 1232
RPWPYA+T RAAP
Sbjct: 617 RPWPYAKTPRAAP 655
Score = 29.0 bits (57), Expect(4) = 4e-048
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1 / +3
Query: 1099 PGGRQPALLCQDPM 1140
P GRQPALL QDP+
Sbjct: 522 PRGRQPALLRQDPL 563
>gb|CF482996.1|CF482996 POL1_10_C07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_10_C07_A002 5', mRNA sequence
Length = 768
Score = 227 bits (490), Expect(4) = e-133
Identities = 90/99 (90%), Positives = 97/99 (97%)
Frame = +2 / +3
Query: 515 NSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSG 694
NSLV+D+VNNGEVSGITLLN+KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMGDSSG
Sbjct: 471 NSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSG 650
Query: 695 VTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISI 811
VTI NTVIGVGDDCISIGPGT+KVNITGVTCGPGHGISI
Sbjct: 651 VTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISI 767
Score = 204 bits (439), Expect(4) = e-125
Identities = 85/98 (86%), Positives = 87/98 (88%)
Frame = -2 / -3
Query: 810 MLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTL 631
MLMPWPGP VTPVMFTL VPGPMEMQSSPTPMTV MVTPDESPMWMPSVLGLSPGAVT+
Sbjct: 766 MLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTV 587
Query: 630 TSLISMSLHLYMFMWKNLELSSVIPDTSPLFTKSITSE 517
TSLI+MSLH FMWKNL SSVIPDTSPLFT S TSE
Sbjct: 586 TSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSE 473
Score = 190 bits (410), Expect(4) = e-125
Identities = 76/83 (91%), Positives = 77/83 (92%)
Frame = -2 / -3
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAFV
Sbjct: 379 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFV 200
Query: 198 LSVLPLPEAPNLVMSKDPPGPDA 130
LS LP PEAPNL+MS DPPGPDA
Sbjct: 199 LSFLPSPEAPNLLMSNDPPGPDA 131
Score = 187 bits (402), Expect(4) = e-133
Identities = 75/81 (92%), Positives = 79/81 (97%)
Frame = +2 / +3
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVGPLNFTGPCK
Sbjct: 138 GPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCK 317
Query: 317 GDVTIQVNGNLLATTDLSQYK 379
GDVTIQV+GNLLATTDLSQYK
Sbjct: 318 GDVTIQVDGNLLATTDLSQYK 380
Score = 166 bits (356), Expect(4) = 5e-079
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +2
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPM 312
VRA V+RH QVGRL + Q+G HEGCAGG+ +GVRRHREADDPHP GRLPRRTTQLHRP+
Sbjct: 134 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 313
Query: 313 QGRRDHPGEWQSAGDHGPKPVQG 381
QGRRDHPG QSAGDHGP+PVQG
Sbjct: 314 QGRRDHPGGRQSAGDHGPEPVQG 382
Score = 116 bits (248), Expect(4) = 3e-050
Identities = 56/83 (67%), Positives = 57/83 (68%)
Frame = -1 / -2
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCPXXXXXXX 200
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 380 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHSLR 201
Query: 199 XXXXXXXXXAQLGDVEGPTGPGR 131
AQL DVE P PGR
Sbjct: 200 AVLLAVAGGAQLADVERPARPGR 132
Score = 102 bits (218), Expect(4) = 5e-079
Identities = 42/54 (77%), Positives = 44/54 (81%)
Frame = +1 / +2
Query: 514 QLAGDGLREQRGGVRDHAAQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
+LAG GLREQRGGVRDHAA+ QVLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 470 ELAGAGLREQRGGVRDHAAKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 631
Score = 84.9 bits (179), Expect(4) = e-133
Identities = 34/37 (91%), Positives = 34/37 (91%)
Frame = +2 / +3
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKY 496
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNS V Y
Sbjct: 381 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSLVLDY 491
Score = 79.9 bits (168), Expect(4) = e-125
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = -2 / -3
Query: 486 TQEFLLHTAGPCPSSFPLPVMTRLSTRRISIQLP 385
T EFLLHTAGPCPSSFPLPV+TRLSTRRISIQLP
Sbjct: 481 TSEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 380
Score = 68.4 bits (143), Expect(2) = 2e-023
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / -1
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRRTP PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 243 CRRTPTSMPPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 124
Score = 63.4 bits (132), Expect(2) = 2e-023
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -1
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 381 PCTGSGPWSPADCRPPGWSRRPC 313
Score = 52.8 bits (109), Expect(5) = 1e-023
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +1 / +2
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQ 504
*LDRD GQP HRQG+ARRAG RVEQEL +R Q
Sbjct: 383 *LDRDPACGQPGDHRQGEARRAGPRRVEQELAGAGLREQ 499
Score = 52.4 bits (108), Expect(4) = 3e-050
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = -1 / -2
Query: 469 PHGWPLPVELSLAGDDKVVHA*NLDPITMIL 377
PHG LPVEL LAGD +VVH +LDP+T++L
Sbjct: 464 PHGGALPVELPLAGDHQVVHTQDLDPVTLVL 372
Score = 51.5 bits (106), Expect(4) = 5e-079
Identities = 22/31 (70%), Positives = 22/31 (70%)
Frame = +3 / +1
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGART 479
V GSR WTT SPAR SSTGR PCGART
Sbjct: 382 VTGSRSCVWTTW*SPARGSSTGRAPPCGART 474
Score = 47.8 bits (98), Expect(5) = 1e-023
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +1
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 316 RAT*PSRWTAICWRPRT*ASTRV 384
Score = 45.5 bits (93), Expect(4) = 3e-050
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / -2
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 644 RVAHVDAVRVGAVPGRRDRHILNQ 573
Score = 43.2 bits (88), Expect(4) = 3e-050
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1 / -2
Query: 568 QRDPGHLPVVHEVHHQRV 515
QRDPGHLPVVH V HQRV
Sbjct: 524 QRDPGHLPVVHVVQHQRV 471
Score = 39.1 bits (79), Expect(4) = e-133
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +3
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 24 KMACTGNAMRAFFLLAFVCAAH 89
Score = 35.4 bits (71), Expect(4) = e-125
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -1
Query: 104 PSHHARCRRALEGTRLSLHCLYMP 33
PS HAR RR G RLS HCL P
Sbjct: 99 PSQHARRRRTPGGRRLSSHCLCTP 28
Score = 35.0 bits (70), Expect(4) = 5e-079
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1 / +2
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGK 108
+ ++G++RQC+ESL+P L RA EG+
Sbjct: 17 TNKNGVHRQCDESLLPPGVRLRRACWEGR 103
Score = 30.9 bits (61), Expect(5) = 1e-023
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +1
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 604 GTAPTRTASTW 636
Score = 30.4 bits (60), Expect(5) = 1e-023
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 127 KRRPGLAGRSTSASWAP 177
Score = 29.5 bits (58), Expect(5) = 1e-023
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3 / +1
Query: 30 RWHV*TMQ*EPCSF*RSSAPCMVRRQSQRTTIQKRPGP 143
+W M+*EP S RSSAP M+ R T ++ P
Sbjct: 25 KWRAQAMR*EPSSSWRSSAPRMLGRTLLPRTAMRKRRP 138
>gb|CF489932.1|CF489932 POL1_61_B02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_61_B02_A002 5', mRNA sequence
Length = 733
Score = 288 bits (624), Expect(3) = e-132
Identities = 114/123 (92%), Positives = 120/123 (97%)
Frame = +2 / +2
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 365 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 544
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISI 745
LLN+KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVTI NTVIGVGDDCISI
Sbjct: 545 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 724
Query: 746 GPG 754
GPG
Sbjct: 725 GPG 733
Score = 258 bits (557), Expect(3) = e-123
Identities = 109/123 (88%), Positives = 112/123 (91%)
Frame = -2 / -2
Query: 753 PGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLE 574
PGPMEMQSSPTPMTV MVTPDESPMWMPSVLGLSPGAVT+TSLI+MSLH FMWKNL
Sbjct: 732 PGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLA 553
Query: 573 LSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTRRISI 394
SSVIPDTSPLFT S TSELGRILQSYFL EFLLHTAGPCPSSFPLPV+TRLSTRRISI
Sbjct: 552 FSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISI 373
Query: 393 QLP 385
QLP
Sbjct: 372 QLP 364
Score = 190 bits (410), Expect(3) = e-123
Identities = 76/83 (91%), Positives = 77/83 (92%)
Frame = -2 / -2
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAFV
Sbjct: 363 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFV 184
Query: 198 LSVLPLPEAPNLVMSKDPPGPDA 130
LS LP PEAPNL+MS DPPGPDA
Sbjct: 183 LSFLPSPEAPNLLMSNDPPGPDA 115
Score = 187 bits (402), Expect(3) = e-132
Identities = 75/81 (92%), Positives = 79/81 (97%)
Frame = +2 / +2
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVGPLNFTGPCK
Sbjct: 122 GPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCK 301
Query: 317 GDVTIQVNGNLLATTDLSQYK 379
GDVTIQV+GNLLATTDLSQYK
Sbjct: 302 GDVTIQVDGNLLATTDLSQYK 364
Score = 175 bits (376), Expect(3) = 8e-091
Identities = 75/96 (78%), Positives = 79/96 (82%)
Frame = +1 / +1
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 367 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 546
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
A+ QVLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 547 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 654
Score = 166 bits (356), Expect(3) = 8e-091
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +1
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPM 312
VRA V+RH QVGRL + Q+G HEGCAGG+ +GVRRHREADDPHP GRLPRRTTQLHRP+
Sbjct: 118 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 297
Query: 313 QGRRDHPGEWQSAGDHGPKPVQG 381
QGRRDHPG QSAGDHGP+PVQG
Sbjct: 298 QGRRDHPGGRQSAGDHGPEPVQG 366
Score = 116 bits (248), Expect(3) = 3e-054
Identities = 56/83 (67%), Positives = 57/83 (68%)
Frame = -1 / -1
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCPXXXXXXX 200
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 364 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHSLR 185
Query: 199 XXXXXXXXXAQLGDVEGPTGPGR 131
AQL DVE P PGR
Sbjct: 184 AVLLAVAGGAQLADVERPARPGR 116
Score = 91.3 bits (193), Expect(3) = 3e-054
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / -1
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 547 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 368
Query: 388 TMIL 377
T++L
Sbjct: 367 TLVL 356
Score = 68.9 bits (144), Expect(5) = 3e-028
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +3
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 366 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 494
Score = 68.4 bits (143), Expect(2) = 2e-023
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / -3
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRRTP PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 227 CRRTPTSMPPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 108
Score = 63.4 bits (132), Expect(2) = 2e-023
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -3
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 365 PCTGSGPWSPADCRPPGWSRRPC 297
Score = 47.8 bits (98), Expect(5) = 3e-028
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +3
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 300 RAT*PSRWTAICWRPRT*ASTRV 368
Score = 45.5 bits (93), Expect(3) = 3e-054
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / -1
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 667 RVAHVDAVRVGAVPGRRDRHILNQ 596
Score = 39.1 bits (79), Expect(3) = e-132
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +2
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 8 KMACTGNAMRAFFLLAFVCAAH 73
Score = 35.4 bits (71), Expect(3) = e-123
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -3
Query: 104 PSHHARCRRALEGTRLSLHCLYMP 33
PS HAR RR G RLS HCL P
Sbjct: 83 PSQHARRRRTPGGRRLSSHCLCTP 12
Score = 35.0 bits (70), Expect(3) = 8e-091
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1 / +1
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGK 108
+ ++G++RQC+ESL+P L RA EG+
Sbjct: 1 TNKNGVHRQCDESLLPPGVRLRRACWEGR 87
Score = 30.9 bits (61), Expect(5) = 3e-028
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 627 GTAPTRTASTW 659
Score = 30.4 bits (60), Expect(5) = 3e-028
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +3
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 111 KRRPGLAGRSTSASWAP 161
Score = 29.5 bits (58), Expect(5) = 3e-028
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3 / +3
Query: 30 RWHV*TMQ*EPCSF*RSSAPCMVRRQSQRTTIQKRPGP 143
+W M+*EP S RSSAP M+ R T ++ P
Sbjct: 9 KWRAQAMR*EPSSSWRSSAPRMLGRTLLPRTAMRKRRP 122
>gb|CL155266.1|CL155266 104_341_10782005_116_31472_101 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782005, DNA
sequence
Length = 641
Score = 351 bits (760), Expect(2) = e-131
Identities = 139/149 (93%), Positives = 146/149 (97%)
Frame = +2 / -3
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 447 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 268
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISI 745
LLN+KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVTI NTVIGVGDDCISI
Sbjct: 267 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 88
Query: 746 GPGTSKVNITGVTCGPGHGISIGSLGRYK 832
GPGT+KVNITGVTCGPGHGISIGSLGRYK
Sbjct: 87 GPGTTKVNITGVTCGPGHGISIGSLGRYK 1
Score = 319 bits (690), Expect(2) = e-123
Identities = 133/149 (89%), Positives = 136/149 (91%)
Frame = -2 / +2
Query: 831 LYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGL 652
LYRPRLPMLMPWPGP VTPVMFTL VPGPMEMQSSPTPMTV MVTPDESPMWMPSVLGL
Sbjct: 2 LYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGL 181
Query: 651 SPGAVTLTSLISMSLHLYMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFL 472
SPGAVT+TSLI+MSLH FMWKNL SSVIPDTSPLFT S TSELGRILQSYFL EFL
Sbjct: 182 SPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFL 361
Query: 471 LHTAGPCPSSFPLPVMTRLSTRRISIQLP 385
LHTAGPCPSSFPLPV+TRLSTRRISIQLP
Sbjct: 362 LHTAGPCPSSFPLPVITRLSTRRISIQLP 448
Score = 175 bits (376), Expect(2) = 4e-077
Identities = 75/96 (78%), Positives = 79/96 (82%)
Frame = +1 / -2
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 445 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 266
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
A+ QVLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 265 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 158
Score = 144 bits (310), Expect(2) = e-123
Identities = 59/64 (92%), Positives = 59/64 (92%)
Frame = -2 / +2
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPL GPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAFV
Sbjct: 449 LYWLRSVVASRLPSTWMVTSPLLGPVKLSGPTRYSPLGMRIVCFPVPPHADVHASCTAFV 628
Query: 198 LSVL 187
LS L
Sbjct: 629 LSFL 640
Score = 140 bits (301), Expect(2) = e-131
Identities = 53/65 (81%), Positives = 58/65 (89%)
Frame = +1 / -2
Query: 187 QDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPMQGRRDHPGEWQSAGDHGP 366
Q+G HEGCAGG+ +GVRRHREADDPHP GR+PR TTQLHRP QGRRDHPG QSAGDHGP
Sbjct: 640 QEGQHEGCAGGMNVGVRRHREADDPHP*GRIPRGTTQLHRPEQGRRDHPGGRQSAGDHGP 461
Query: 367 KPVQG 381
+PVQG
Sbjct: 460 EPVQG 446
Score = 136 bits (291), Expect(2) = 4e-077
Identities = 57/64 (89%), Positives = 60/64 (93%)
Frame = +2 / -3
Query: 188 KTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDL 367
K DSTKAVQEA SACGGTGKQTILIPKG++LVGPLNFTGP KGDVTIQV+GNLLATTDL
Sbjct: 639 KKDSTKAVQEA*TSACGGTGKQTILIPKGEYLVGPLNFTGPSKGDVTIQVDGNLLATTDL 460
Query: 368 SQYK 379
SQYK
Sbjct: 459 SQYK 448
Score = 94.5 bits (200), Expect(4) = 6e-055
Identities = 43/51 (84%), Positives = 44/51 (86%)
Frame = -1 / +1
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARR 227
LVLA VRGRQQIA+HLDGHVALA A EVEWS E AL DEDRLLPGAAARR
Sbjct: 448 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSHEVFALRDEDRLLPGAAARR 600
Score = 91.3 bits (193), Expect(4) = 6e-055
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / +1
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 265 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 444
Query: 388 TMIL 377
T++L
Sbjct: 445 TLVL 456
Score = 68.9 bits (144), Expect(3) = 2e-021
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / -1
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 446 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 318
Score = 47.8 bits (98), Expect(3) = 2e-021
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / -1
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 512 RAT*PSRWTAICWRPRT*ASTRV 444
Score = 45.5 bits (93), Expect(4) = 6e-055
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / +1
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 145 RVAHVDAVRVGAVPGRRDRHILNQ 216
Score = 42.3 bits (86), Expect(4) = 6e-055
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -3 / +3
Query: 242 CRRTPMPTPPAQPSCYPSC 186
CRRTP PPAQPSC PSC
Sbjct: 585 CRRTPTFMPPAQPSCCPSC 641
Score = 30.9 bits (61), Expect(3) = 2e-021
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -1
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 185 GTAPTRTASTW 153
>gb|CF487417.1|CF487417 POL1_43_D12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_D12_A002 5', mRNA sequence
Length = 742
Score = 288 bits (624), Expect(3) = e-130
Identities = 114/123 (92%), Positives = 120/123 (97%)
Frame = +2 / +2
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 374 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 553
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISI 745
LLN+KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVTI NTVIGVGDDCISI
Sbjct: 554 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 733
Query: 746 GPG 754
GPG
Sbjct: 734 GPG 742
Score = 258 bits (557), Expect(3) = e-122
Identities = 109/123 (88%), Positives = 112/123 (91%)
Frame = -2 / -2
Query: 753 PGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLE 574
PGPMEMQSSPTPMTV MVTPDESPMWMPSVLGLSPGAVT+TSLI+MSLH FMWKNL
Sbjct: 741 PGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLA 562
Query: 573 LSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTRRISI 394
SSVIPDTSPLFT S TSELGRILQSYFL EFLLHTAGPCPSSFPLPV+TRLSTRRISI
Sbjct: 561 FSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISI 382
Query: 393 QLP 385
QLP
Sbjct: 381 QLP 373
Score = 187 bits (402), Expect(3) = e-122
Identities = 75/83 (90%), Positives = 76/83 (91%)
Frame = -2 / -2
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPP AD HASCTAFV
Sbjct: 372 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPRADVHASCTAFV 193
Query: 198 LSVLPLPEAPNLVMSKDPPGPDA 130
LS LP PEAPNL+MS DPPGPDA
Sbjct: 192 LSFLPSPEAPNLLMSNDPPGPDA 124
Score = 181 bits (390), Expect(3) = e-130
Identities = 74/81 (91%), Positives = 78/81 (96%)
Frame = +2 / +2
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DSTKAVQEAW SA GGTGKQTILIPKGD+LVGPLNFTGPCK
Sbjct: 131 GPGGSFDISKLGASGDGKKDSTKAVQEAWTSARGGTGKQTILIPKGDYLVGPLNFTGPCK 310
Query: 317 GDVTIQVNGNLLATTDLSQYK 379
GDVTIQV+GNLLATTDLSQYK
Sbjct: 311 GDVTIQVDGNLLATTDLSQYK 373
Score = 175 bits (376), Expect(3) = 2e-090
Identities = 75/96 (78%), Positives = 79/96 (82%)
Frame = +1 / +1
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 376 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 555
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
A+ QVLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 556 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 663
Score = 164 bits (352), Expect(3) = 2e-090
Identities = 65/83 (78%), Positives = 72/83 (86%)
Frame = +1 / +1
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPM 312
VRA V+RH QVGRL + Q+G HEGCAGG+ +G RRHREADDPHP GRLPRRTTQLHRP+
Sbjct: 127 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGARRHREADDPHP*GRLPRRTTQLHRPV 306
Query: 313 QGRRDHPGEWQSAGDHGPKPVQG 381
QGRRDHPG QSAGDHGP+PVQG
Sbjct: 307 QGRRDHPGGRQSAGDHGPEPVQG 375
Score = 116 bits (248), Expect(3) = 3e-054
Identities = 56/83 (67%), Positives = 57/83 (68%)
Frame = -1 / -1
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCPXXXXXXX 200
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 373 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHSLR 194
Query: 199 XXXXXXXXXAQLGDVEGPTGPGR 131
AQL DVE P PGR
Sbjct: 193 AVLLAVAGGAQLADVERPARPGR 125
Score = 91.3 bits (193), Expect(3) = 3e-054
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / -1
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 556 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 377
Query: 388 TMIL 377
T++L
Sbjct: 376 TLVL 365
Score = 68.9 bits (144), Expect(5) = 2e-028
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +3
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 375 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 503
Score = 66.1 bits (138), Expect(2) = 8e-023
Identities = 26/40 (65%), Positives = 29/40 (72%)
Frame = -3 / -3
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRR P PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 236 CRRAPTSMPPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 117
Score = 63.4 bits (132), Expect(2) = 8e-023
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -3
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 374 PCTGSGPWSPADCRPPGWSRRPC 306
Score = 47.8 bits (98), Expect(5) = 2e-028
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +3
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 309 RAT*PSRWTAICWRPRT*ASTRV 377
Score = 45.5 bits (93), Expect(3) = 3e-054
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / -1
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 676 RVAHVDAVRVGAVPGRRDRHILNQ 605
Score = 39.1 bits (79), Expect(3) = e-130
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +2
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 17 KMACTGNAMRAFFLLAFVCAAH 82
Score = 35.4 bits (71), Expect(3) = e-122
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -3
Query: 104 PSHHARCRRALEGTRLSLHCLYMP 33
PS HAR RR G RLS HCL P
Sbjct: 92 PSQHARRRRTPGGRRLSSHCLCTP 21
Score = 35.4 bits (71), Expect(3) = 2e-090
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1 / +1
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGKVKGQR 123
+ ++G++RQC+ESL+P L RA EG+ + R
Sbjct: 10 TNKNGVHRQCDESLLPPGVRLRRACWEGRSRQGR 111
Score = 30.9 bits (61), Expect(5) = 2e-028
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 636 GTAPTRTASTW 668
Score = 30.4 bits (60), Expect(5) = 2e-028
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +3
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 120 KRRPGLAGRSTSASWAP 170
Score = 29.9 bits (59), Expect(5) = 2e-028
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3 / +3
Query: 30 RWHV*TMQ*EPCSF*RSSAPCMVRRQSQRTTIQKRPGP 143
+W M+*EP S RSSAP M+ R T ++ P
Sbjct: 18 KWRAQAMR*EPSSSWRSSAPRMLGRTLPPRTAMRKRRP 131
>gb|CW323759.1|CW323759 104_818_11476800_148_35909_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476800, DNA
sequence
Length = 622
Score = 332 bits (719), Expect(2) = e-129
Identities = 131/141 (92%), Positives = 138/141 (97%)
Frame = +2 / -2
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 423 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 244
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISI 745
LLN+KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVTI NTVIGVGDDCISI
Sbjct: 243 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 64
Query: 746 GPGTSKVNITGVTCGPGHGIS 808
GPGT+KVNITGVTCGPGHGIS
Sbjct: 63 GPGTTKVNITGVTCGPGHGIS 1
Score = 298 bits (646), Expect(2) = e-119
Identities = 125/141 (88%), Positives = 128/141 (90%)
Frame = -2 / +2
Query: 807 LMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLT 628
LMPWPGP VTPVMFTL VPGPMEMQSSPTPMTV MVTPDESPMWMPSVLGLSPGAVT+T
Sbjct: 2 LMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVT 181
Query: 627 SLISMSLHLYMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCP 448
SLI+MSLH FMWKNL SSVIPDTSPLFT S TSELGRILQSYFL EFLLHTAGPCP
Sbjct: 182 SLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCP 361
Query: 447 SSFPLPVMTRLSTRRISIQLP 385
SSFPLPV+TRLSTRRISIQLP
Sbjct: 362 SSFPLPVITRLSTRRISIQLP 424
Score = 175 bits (376), Expect(2) = 5e-080
Identities = 75/96 (78%), Positives = 79/96 (82%)
Frame = +1 / -1
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 421 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 242
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
A+ QVLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 241 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 134
Score = 152 bits (327), Expect(2) = e-129
Identities = 61/66 (92%), Positives = 64/66 (96%)
Frame = +2 / -2
Query: 182 NGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATT 361
+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVGPLNFTGPCKGDVTIQV+GNLLATT
Sbjct: 621 DGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQVDGNLLATT 442
Query: 362 DLSQYK 379
DLSQYK
Sbjct: 441 DLSQYK 424
Score = 152 bits (326), Expect(2) = e-119
Identities = 61/65 (93%), Positives = 61/65 (93%)
Frame = -2 / +2
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAFV
Sbjct: 425 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFV 604
Query: 198 LSVLP 184
LS LP
Sbjct: 605 LSFLP 619
Score = 145 bits (312), Expect(2) = 5e-080
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = +1 / -1
Query: 187 QDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPMQGRRDHPGEWQSAGDHGP 366
Q+G HEGCAGG+ +GVRRHREADDPHP GRLPRRTTQLHRP+QGRRDHPG QSAGDHGP
Sbjct: 616 QEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPVQGRRDHPGGRQSAGDHGP 437
Query: 367 KPVQG 381
+PVQG
Sbjct: 436 EPVQG 422
Score = 101 bits (216), Expect(4) = 2e-057
Identities = 46/53 (86%), Positives = 47/53 (88%)
Frame = -1 / +1
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCP 221
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 424 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRP 582
Score = 91.3 bits (193), Expect(4) = 2e-057
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / +1
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 241 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 420
Query: 388 TMIL 377
T++L
Sbjct: 421 TLVL 432
Score = 68.9 bits (144), Expect(3) = 2e-021
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / -3
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 422 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 294
Score = 47.8 bits (98), Expect(3) = 2e-021
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / -3
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 488 RAT*PSRWTAICWRPRT*ASTRV 420
Score = 45.5 bits (93), Expect(4) = 2e-057
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / +1
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 121 RVAHVDAVRVGAVPGRRDRHILNQ 192
Score = 43.7 bits (89), Expect(4) = 2e-057
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -3 / +3
Query: 242 CRRTPMPTPPAQPSCYPSC 186
CRRTP PPAQPSC PSC
Sbjct: 561 CRRTPTSMPPAQPSCCPSC 617
Score = 30.9 bits (61), Expect(3) = 2e-021
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -3
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 161 GTAPTRTASTW 129
>gb|CW309833.1|CW309833 104_798_11469399_148_35741_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469399, DNA
sequence
Length = 614
Score = 417 bits (905), Expect(2) = e-128
Identities = 166/178 (93%), Positives = 175/178 (98%)
Frame = +2 / -3
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 534 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 355
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISI 745
LLN+KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVTI NTVIGVGDDCISI
Sbjct: 354 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 175
Query: 746 GPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYED 919
GPGT+KVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT+NG+RIKAYED
Sbjct: 174 GPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYED 1
Score = 367 bits (796), Expect(2) = e-113
Identities = 156/178 (87%), Positives = 161/178 (90%)
Frame = -2 / +2
Query: 918 SSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPME 739
SSYAL+R PL VF SVQS TL+SVTSFSSLYRPRLPMLMPWPGP VTPVMFTL VPGPME
Sbjct: 2 SSYALIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPME 181
Query: 738 MQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVI 559
MQSSPTPMTV MVTPDESPMWMPSVLGLSPGAVT+TSLI+MSLH FMWKNL SSVI
Sbjct: 182 MQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVI 361
Query: 558 PDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTRRISIQLP 385
PDTSPLFT S TSELGRILQSYFL EFLLHTAGPCPSSFPLPV+TRLSTRRISIQLP
Sbjct: 362 PDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 535
Score = 175 bits (376), Expect(3) = 1e-065
Identities = 75/96 (78%), Positives = 79/96 (82%)
Frame = +1 / -2
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 532 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 353
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
A+ QVLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 352 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 245
Score = 91.3 bits (193), Expect(4) = 3e-045
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / +1
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 352 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 531
Query: 388 TMIL 377
T++L
Sbjct: 532 TLVL 543
Score = 68.9 bits (144), Expect(3) = 2e-021
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / -1
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 533 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 405
Score = 64.8 bits (135), Expect(2) = e-113
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -2 / +2
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPV 301
LYWLRSVVASRLP TWMVTSPLHGPV
Sbjct: 536 LYWLRSVVASRLPSTWMVTSPLHGPV 613
Score = 63.8 bits (133), Expect(2) = e-128
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +1 / -2
Query: 301 HRPMQGRRDHPGEWQSAGDHGPKPVQG 381
HRP+QGRRDHPG QSAGDHGP+PVQG
Sbjct: 613 HRPVQGRRDHPGGRQSAGDHGPEPVQG 533
Score = 63.4 bits (132), Expect(4) = 3e-045
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / +3
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 534 PCTGSGPWSPADCRPPGWSRRPC 602
Score = 63.4 bits (132), Expect(3) = 1e-065
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2 / -3
Query: 302 TGPCKGDVTIQVNGNLLATTDLSQYK 379
TGPCKGDVTIQV+GNLLATTDLSQYK
Sbjct: 612 TGPCKGDVTIQVDGNLLATTDLSQYK 535
Score = 57.9 bits (120), Expect(3) = 1e-065
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1 / -2
Query: 823 AVQGREGRHGYQRQGLHA*EDGQRRPHQGV*G 918
AVQGREGRHG+QR+GL+A ED QR P QGV G
Sbjct: 97 AVQGREGRHGHQREGLYAEEDEQRPPDQGVRG 2
Score = 47.8 bits (98), Expect(3) = 2e-021
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / -1
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 599 RAT*PSRWTAICWRPRT*ASTRV 531
Score = 46.9 bits (96), Expect(4) = 3e-045
Identities = 23/32 (71%), Positives = 23/32 (71%)
Frame = -3 / +3
Query: 917 PHTP*CGRRWPSS*ACSP*R*YP*RPSRPCTA 822
P TP* G R SS A SP R* P*RPSRPCTA
Sbjct: 3 PRTP*SGGRCSSSSAYSPSR*CP*RPSRPCTA 98
Score = 45.5 bits (93), Expect(4) = 3e-045
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / +1
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 232 RVAHVDAVRVGAVPGRRDRHILNQ 303
Score = 30.9 bits (61), Expect(3) = 2e-021
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -1
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 272 GTAPTRTASTW 240
>gb|CW160105.1|CW160105 104_566_11149707_116_36428_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149707, DNA
sequence
Length = 725
Score = 274 bits (593), Expect(3) = e-128
Identities = 108/117 (92%), Positives = 114/117 (97%)
Frame = +2 / +2
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 374 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 553
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDC 736
LLN+KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVTI NTVIGVGDDC
Sbjct: 554 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDC 724
Score = 242 bits (522), Expect(3) = e-118
Identities = 103/117 (88%), Positives = 106/117 (90%)
Frame = -2 / -3
Query: 735 QSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVIP 556
QSSPTPMTV MVTPDESPMWMPSVLGLSPGAVT+TSLI+MSLH FMWKNL SSVIP
Sbjct: 723 QSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIP 544
Query: 555 DTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTRRISIQLP 385
DTSPLFT S TSELGRILQSYFL EFLLHTAGPCPSSFPLPV+TRLSTRRISIQLP
Sbjct: 543 DTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 373
Score = 190 bits (410), Expect(3) = e-118
Identities = 76/83 (91%), Positives = 77/83 (92%)
Frame = -2 / -3
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAFV
Sbjct: 372 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFV 193
Query: 198 LSVLPLPEAPNLVMSKDPPGPDA 130
LS LP PEAPNL+MS DPPGPDA
Sbjct: 192 LSFLPSPEAPNLLMSNDPPGPDA 124
Score = 187 bits (402), Expect(3) = e-128
Identities = 75/81 (92%), Positives = 79/81 (97%)
Frame = +2 / +2
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVGPLNFTGPCK
Sbjct: 131 GPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCK 310
Query: 317 GDVTIQVNGNLLATTDLSQYK 379
GDVTIQV+GNLLATTDLSQYK
Sbjct: 311 GDVTIQVDGNLLATTDLSQYK 373
Score = 175 bits (376), Expect(3) = 8e-091
Identities = 75/96 (78%), Positives = 79/96 (82%)
Frame = +1 / +1
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 376 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 555
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
A+ QVLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 556 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 663
Score = 166 bits (356), Expect(3) = 8e-091
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +1
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPM 312
VRA V+RH QVGRL + Q+G HEGCAGG+ +GVRRHREADDPHP GRLPRRTTQLHRP+
Sbjct: 127 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 306
Query: 313 QGRRDHPGEWQSAGDHGPKPVQG 381
QGRRDHPG QSAGDHGP+PVQG
Sbjct: 307 QGRRDHPGGRQSAGDHGPEPVQG 375
Score = 116 bits (248), Expect(3) = 3e-054
Identities = 56/83 (67%), Positives = 57/83 (68%)
Frame = -1 / -2
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCPXXXXXXX 200
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 373 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHSLR 194
Query: 199 XXXXXXXXXAQLGDVEGPTGPGR 131
AQL DVE P PGR
Sbjct: 193 AVLLAVAGGAQLADVERPARPGR 125
Score = 91.3 bits (193), Expect(3) = 3e-054
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / -2
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 556 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 377
Query: 388 TMIL 377
T++L
Sbjct: 376 TLVL 365
Score = 68.9 bits (144), Expect(5) = 3e-028
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +3
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 375 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 503
Score = 68.4 bits (143), Expect(2) = 2e-023
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / -1
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRRTP PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 236 CRRTPTSMPPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 117
Score = 63.4 bits (132), Expect(2) = 2e-023
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -1
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 374 PCTGSGPWSPADCRPPGWSRRPC 306
Score = 47.8 bits (98), Expect(5) = 3e-028
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +3
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 309 RAT*PSRWTAICWRPRT*ASTRV 377
Score = 45.5 bits (93), Expect(3) = 3e-054
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / -2
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 676 RVAHVDAVRVGAVPGRRDRHILNQ 605
Score = 39.1 bits (79), Expect(3) = e-128
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +2
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 17 KMACTGNAMRAFFLLAFVCAAH 82
Score = 35.4 bits (71), Expect(3) = e-118
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -1
Query: 104 PSHHARCRRALEGTRLSLHCLYMP 33
PS HAR RR G RLS HCL P
Sbjct: 92 PSQHARRRRTPGGRRLSSHCLCTP 21
Score = 35.0 bits (70), Expect(3) = 8e-091
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1 / +1
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGK 108
+ ++G++RQC+ESL+P L RA EG+
Sbjct: 10 TNKNGVHRQCDESLLPPGVRLRRACWEGR 96
Score = 30.9 bits (61), Expect(5) = 3e-028
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 636 GTAPTRTASTW 668
Score = 30.4 bits (60), Expect(5) = 3e-028
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +3
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 120 KRRPGLAGRSTSASWAP 170
Score = 29.5 bits (58), Expect(5) = 3e-028
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3 / +3
Query: 30 RWHV*TMQ*EPCSF*RSSAPCMVRRQSQRTTIQKRPGP 143
+W M+*EP S RSSAP M+ R T ++ P
Sbjct: 18 KWRAQAMR*EPSSSWRSSAPRMLGRTLLPRTAMRKRRP 131
>gb|CW312481.1|CW312481 104_802_11470780_116_35783_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470780, DNA
sequence
Length = 675
Score = 291 bits (629), Expect(2) = e-127
Identities = 115/124 (92%), Positives = 121/124 (97%)
Frame = +2 / -3
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 373 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 194
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISI 745
LLN+KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVTI NTVIGVGDDCISI
Sbjct: 193 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 14
Query: 746 GPGT 757
GPGT
Sbjct: 13 GPGT 2
Score = 259 bits (561), Expect(2) = e-119
Identities = 110/124 (88%), Positives = 113/124 (91%)
Frame = -2 / +3
Query: 756 VPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNL 577
VPGPMEMQSSPTPMTV MVTPDESPMWMPSVLGLSPGAVT+TSLI+MSLH FMWKNL
Sbjct: 3 VPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNL 182
Query: 576 ELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTRRIS 397
SSVIPDTSPLFT S TSELGRILQSYFL EFLLHTAGPCPSSFPLPV+TRLSTRRIS
Sbjct: 183 AFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRIS 362
Query: 396 IQLP 385
IQLP
Sbjct: 363 IQLP 374
Score = 190 bits (410), Expect(2) = e-119
Identities = 76/83 (91%), Positives = 77/83 (92%)
Frame = -2 / +3
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAFV
Sbjct: 375 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFV 554
Query: 198 LSVLPLPEAPNLVMSKDPPGPDA 130
LS LP PEAPNL+MS DPPGPDA
Sbjct: 555 LSFLPSPEAPNLLMSNDPPGPDA 623
Score = 187 bits (402), Expect(2) = e-127
Identities = 75/81 (92%), Positives = 79/81 (97%)
Frame = +2 / -3
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVGPLNFTGPCK
Sbjct: 616 GPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCK 437
Query: 317 GDVTIQVNGNLLATTDLSQYK 379
GDVTIQV+GNLLATTDLSQYK
Sbjct: 436 GDVTIQVDGNLLATTDLSQYK 374
Score = 175 bits (376), Expect(2) = 4e-086
Identities = 75/96 (78%), Positives = 79/96 (82%)
Frame = +1 / -2
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 371 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 192
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
A+ QVLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 191 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 84
Score = 166 bits (356), Expect(2) = 4e-086
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / -2
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPM 312
VRA V+RH QVGRL + Q+G HEGCAGG+ +GVRRHREADDPHP GRLPRRTTQLHRP+
Sbjct: 620 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 441
Query: 313 QGRRDHPGEWQSAGDHGPKPVQG 381
QGRRDHPG QSAGDHGP+PVQG
Sbjct: 440 QGRRDHPGGRQSAGDHGPEPVQG 372
Score = 116 bits (248), Expect(3) = 3e-054
Identities = 56/83 (67%), Positives = 57/83 (68%)
Frame = -1 / +2
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCPXXXXXXX 200
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 374 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHSLR 553
Query: 199 XXXXXXXXXAQLGDVEGPTGPGR 131
AQL DVE P PGR
Sbjct: 554 AVLLAVAGGAQLADVERPARPGR 622
Score = 91.3 bits (193), Expect(3) = 3e-054
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / +2
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 191 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 370
Query: 388 TMIL 377
T++L
Sbjct: 371 TLVL 382
Score = 68.9 bits (144), Expect(4) = 6e-025
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / -1
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 372 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 244
Score = 68.4 bits (143), Expect(2) = 2e-023
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / +1
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRRTP PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 511 CRRTPTSMPPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 630
Score = 63.4 bits (132), Expect(2) = 2e-023
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / +1
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 373 PCTGSGPWSPADCRPPGWSRRPC 441
Score = 47.8 bits (98), Expect(4) = 6e-025
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / -1
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 438 RAT*PSRWTAICWRPRT*ASTRV 370
Score = 45.5 bits (93), Expect(3) = 3e-054
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / +2
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 71 RVAHVDAVRVGAVPGRRDRHILNQ 142
Score = 30.9 bits (61), Expect(4) = 6e-025
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -1
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 111 GTAPTRTASTW 79
Score = 30.4 bits (60), Expect(4) = 6e-025
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / -1
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 627 KRRPGLAGRSTSASWAP 577
>gb|CF488397.1|CF488397 POL1_49_E07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_49_E07_A002 5', mRNA sequence
Length = 699
Score = 280 bits (605), Expect(3) = e-125
Identities = 111/120 (92%), Positives = 117/120 (97%)
Frame = +2 / +1
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 340 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 519
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISI 745
LLN+KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVTI NTVIGVGDDCISI
Sbjct: 520 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 699
Score = 248 bits (537), Expect(3) = e-116
Identities = 106/120 (88%), Positives = 109/120 (90%)
Frame = -2 / -2
Query: 744 MEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSS 565
MEMQSSPTPMTV MVTPDESPMWMPSVLGLSPGAVT+TSLI+MSLH FMWKNL SS
Sbjct: 698 MEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSS 519
Query: 564 VIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTRRISIQLP 385
VIPDTSPLFT S TSELGRILQSYFL EFLLHTAGPCPSSFPLPV+TRLSTRRISIQLP
Sbjct: 518 VIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 339
Score = 185 bits (398), Expect(3) = e-116
Identities = 74/83 (89%), Positives = 76/83 (91%)
Frame = -2 / -2
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSG TR SPLG+RIVCFPVPPHAD HASCTAFV
Sbjct: 338 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGQTR*SPLGVRIVCFPVPPHADVHASCTAFV 159
Query: 198 LSVLPLPEAPNLVMSKDPPGPDA 130
LS LP PEAPNL+MS DPPGPDA
Sbjct: 158 LSFLPSPEAPNLLMSNDPPGPDA 90
Score = 180 bits (387), Expect(3) = e-125
Identities = 73/81 (90%), Positives = 77/81 (95%)
Frame = +2 / +1
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTIL PKGD+LV PLNFTGPCK
Sbjct: 97 GPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILTPKGDYLV*PLNFTGPCK 276
Query: 317 GDVTIQVNGNLLATTDLSQYK 379
GDVTIQV+GNLLATTDLSQYK
Sbjct: 277 GDVTIQVDGNLLATTDLSQYK 339
Score = 175 bits (376), Expect(3) = 6e-087
Identities = 75/96 (78%), Positives = 79/96 (82%)
Frame = +1 / +3
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 342 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 521
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
A+ QVLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 522 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 629
Score = 162 bits (349), Expect(3) = 6e-087
Identities = 65/83 (78%), Positives = 72/83 (86%)
Frame = +1 / +3
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPM 312
VRA V+RH QVGRL + Q+G HEGCAGG+ +GVRRHREADDPHP GRLPR TTQLHRP+
Sbjct: 93 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRLTTQLHRPV 272
Query: 313 QGRRDHPGEWQSAGDHGPKPVQG 381
QGRRDHPG QSAGDHGP+PVQG
Sbjct: 273 QGRRDHPGGRQSAGDHGPEPVQG 341
Score = 113 bits (241), Expect(3) = 3e-053
Identities = 55/83 (66%), Positives = 56/83 (67%)
Frame = -1 / -1
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCPXXXXXXX 200
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL EDRLLPGAAARR P
Sbjct: 339 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRGEDRLLPGAAARRRPCLLHSLR 160
Query: 199 XXXXXXXXXAQLGDVEGPTGPGR 131
AQL DVE P PGR
Sbjct: 159 AVLLAVAGGAQLADVERPARPGR 91
Score = 91.3 bits (193), Expect(3) = 3e-053
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / -1
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 522 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 343
Query: 388 TMIL 377
T++L
Sbjct: 342 TLVL 331
Score = 68.9 bits (144), Expect(5) = 4e-027
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +2
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 341 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 469
Score = 68.4 bits (143), Expect(2) = 2e-023
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / -3
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRRTP PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 202 CRRTPTSMPPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 83
Score = 63.4 bits (132), Expect(2) = 2e-023
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -3
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 340 PCTGSGPWSPADCRPPGWSRRPC 272
Score = 47.8 bits (98), Expect(5) = 4e-027
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +2
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 275 RAT*PSRWTAICWRPRT*ASTRV 343
Score = 45.5 bits (93), Expect(3) = 3e-053
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / -1
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 642 RVAHVDAVRVGAVPGRRDRHILNQ 571
Score = 30.9 bits (61), Expect(5) = 4e-027
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +2
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 602 GTAPTRTASTW 634
Score = 30.4 bits (60), Expect(5) = 4e-027
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +2
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 86 KRRPGLAGRSTSASWAP 136
Score = 29.5 bits (58), Expect(3) = e-125
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2 / +1
Query: 47 NAMRALFLLALFCTVH 94
NAMRA FLLA C H
Sbjct: 1 NAMRAFFLLAFVCAAH 48
Score = 27.6 bits (54), Expect(3) = e-116
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3 / -3
Query: 104 PSHHARCRRALEGTRLSLH 48
PS HAR RR G RLS H
Sbjct: 58 PSQHARRRRTPGGRRLSSH 2
Score = 25.4 bits (49), Expect(3) = 6e-087
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3 / +2
Query: 48 MQ*EPCSF*RSSAPCMVRRQSQRTTIQKRPGP 143
M+*EP S RSSAP M+ R T ++ P
Sbjct: 2 MR*EPSSSWRSSAPRMLGRTLLPRTAMRKRRP 97
Score = 24.9 bits (48), Expect(5) = 4e-027
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1 / +3
Query: 49 CNESLVPSSALLHRAW*EGK 108
C+ESL+P L RA EG+
Sbjct: 3 CDESLLPPGVRLRRACWEGR 62
>gb|CF489809.1|CF489809 POL1_59_F04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_59_F04_A002 5', mRNA sequence
Length = 716
Score = 262 bits (566), Expect(3) = e-124
Identities = 104/113 (92%), Positives = 110/113 (97%)
Frame = +2 / +3
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 378 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 557
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGV 724
LLN+KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVTI NTVIGV
Sbjct: 558 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGV 716
Score = 232 bits (502), Expect(3) = e-115
Identities = 99/113 (87%), Positives = 102/113 (90%)
Frame = -2 / -2
Query: 723 TPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVIPDTSP 544
TPMTV MVTPDESPMWMPSVLGLSPGAVT+TSLI+MSLH FMWKNL SSVIPDTSP
Sbjct: 715 TPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSP 536
Query: 543 LFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTRRISIQLP 385
LFT S TSELGRILQSYFL EFLLHTAGPCPSSFPLPV+TRLSTRRISIQLP
Sbjct: 535 LFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 377
Score = 190 bits (410), Expect(3) = e-115
Identities = 76/83 (91%), Positives = 77/83 (92%)
Frame = -2 / -2
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAFV
Sbjct: 376 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFV 197
Query: 198 LSVLPLPEAPNLVMSKDPPGPDA 130
LS LP PEAPNL+MS DPPGPDA
Sbjct: 196 LSFLPSPEAPNLLMSNDPPGPDA 128
Score = 187 bits (402), Expect(3) = e-124
Identities = 75/81 (92%), Positives = 79/81 (97%)
Frame = +2 / +3
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVGPLNFTGPCK
Sbjct: 135 GPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCK 314
Query: 317 GDVTIQVNGNLLATTDLSQYK 379
GDVTIQV+GNLLATTDLSQYK
Sbjct: 315 GDVTIQVDGNLLATTDLSQYK 377
Score = 175 bits (376), Expect(3) = 8e-091
Identities = 75/96 (78%), Positives = 79/96 (82%)
Frame = +1 / +2
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 380 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 559
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
A+ QVLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 560 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 667
Score = 166 bits (356), Expect(3) = 8e-091
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +2
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPM 312
VRA V+RH QVGRL + Q+G HEGCAGG+ +GVRRHREADDPHP GRLPRRTTQLHRP+
Sbjct: 131 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 310
Query: 313 QGRRDHPGEWQSAGDHGPKPVQG 381
QGRRDHPG QSAGDHGP+PVQG
Sbjct: 311 QGRRDHPGGRQSAGDHGPEPVQG 379
Score = 116 bits (248), Expect(3) = 3e-054
Identities = 56/83 (67%), Positives = 57/83 (68%)
Frame = -1 / -1
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCPXXXXXXX 200
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 377 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHSLR 198
Query: 199 XXXXXXXXXAQLGDVEGPTGPGR 131
AQL DVE P PGR
Sbjct: 197 AVLLAVAGGAQLADVERPARPGR 129
Score = 91.3 bits (193), Expect(3) = 3e-054
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / -1
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 560 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 381
Query: 388 TMIL 377
T++L
Sbjct: 380 TLVL 369
Score = 68.9 bits (144), Expect(5) = 2e-028
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +1
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 379 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 507
Score = 68.4 bits (143), Expect(2) = 2e-023
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / -3
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRRTP PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 240 CRRTPTSMPPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 121
Score = 63.4 bits (132), Expect(2) = 2e-023
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -3
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 378 PCTGSGPWSPADCRPPGWSRRPC 310
Score = 47.8 bits (98), Expect(5) = 2e-028
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +1
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 313 RAT*PSRWTAICWRPRT*ASTRV 381
Score = 45.5 bits (93), Expect(3) = 3e-054
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / -1
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 680 RVAHVDAVRVGAVPGRRDRHILNQ 609
Score = 39.1 bits (79), Expect(3) = e-124
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +3
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 21 KMACTGNAMRAFFLLAFVCAAH 86
Score = 35.4 bits (71), Expect(3) = e-115
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -3
Query: 104 PSHHARCRRALEGTRLSLHCLYMP 33
PS HAR RR G RLS HCL P
Sbjct: 96 PSQHARRRRTPGGRRLSSHCLCTP 25
Score = 35.0 bits (70), Expect(3) = 8e-091
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1 / +2
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGK 108
+ ++G++RQC+ESL+P L RA EG+
Sbjct: 14 TNKNGVHRQCDESLLPPGVRLRRACWEGR 100
Score = 30.9 bits (61), Expect(5) = 2e-028
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +1
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 640 GTAPTRTASTW 672
Score = 30.4 bits (60), Expect(5) = 2e-028
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 124 KRRPGLAGRSTSASWAP 174
Score = 29.5 bits (58), Expect(5) = 2e-028
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3 / +1
Query: 30 RWHV*TMQ*EPCSF*RSSAPCMVRRQSQRTTIQKRPGP 143
+W M+*EP S RSSAP M+ R T ++ P
Sbjct: 22 KWRAQAMR*EPSSSWRSSAPRMLGRTLLPRTAMRKRRP 135
>gb|CF486455.1|CF486455 POL1_37_F12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_37_F12_A002 5', mRNA sequence
Length = 719
Score = 260 bits (562), Expect(3) = e-124
Identities = 103/112 (91%), Positives = 109/112 (97%)
Frame = +2 / +1
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 382 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 561
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIG 721
LLN+KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVTI NTVIG
Sbjct: 562 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIG 717
Score = 232 bits (502), Expect(3) = e-115
Identities = 99/113 (87%), Positives = 102/113 (90%)
Frame = -2 / -1
Query: 723 TPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVIPDTSP 544
TPMTV MVTPDESPMWMPSVLGLSPGAVT+TSLI+MSLH FMWKNL SSVIPDTSP
Sbjct: 719 TPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSP 540
Query: 543 LFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTRRISIQLP 385
LFT S TSELGRILQSYFL EFLLHTAGPCPSSFPLPV+TRLSTRRISIQLP
Sbjct: 539 LFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 381
Score = 190 bits (410), Expect(3) = e-115
Identities = 76/83 (91%), Positives = 77/83 (92%)
Frame = -2 / -1
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAFV
Sbjct: 380 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFV 201
Query: 198 LSVLPLPEAPNLVMSKDPPGPDA 130
LS LP PEAPNL+MS DPPGPDA
Sbjct: 200 LSFLPSPEAPNLLMSNDPPGPDA 132
Score = 187 bits (402), Expect(3) = e-124
Identities = 75/81 (92%), Positives = 79/81 (97%)
Frame = +2 / +1
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVGPLNFTGPCK
Sbjct: 139 GPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCK 318
Query: 317 GDVTIQVNGNLLATTDLSQYK 379
GDVTIQV+GNLLATTDLSQYK
Sbjct: 319 GDVTIQVDGNLLATTDLSQYK 381
Score = 175 bits (376), Expect(3) = 8e-091
Identities = 75/96 (78%), Positives = 79/96 (82%)
Frame = +1 / +3
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 384 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 563
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
A+ QVLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 564 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 671
Score = 166 bits (356), Expect(3) = 8e-091
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +3
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPM 312
VRA V+RH QVGRL + Q+G HEGCAGG+ +GVRRHREADDPHP GRLPRRTTQLHRP+
Sbjct: 135 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 314
Query: 313 QGRRDHPGEWQSAGDHGPKPVQG 381
QGRRDHPG QSAGDHGP+PVQG
Sbjct: 315 QGRRDHPGGRQSAGDHGPEPVQG 383
Score = 116 bits (248), Expect(3) = 3e-054
Identities = 56/83 (67%), Positives = 57/83 (68%)
Frame = -1 / -3
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCPXXXXXXX 200
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 381 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHSLR 202
Query: 199 XXXXXXXXXAQLGDVEGPTGPGR 131
AQL DVE P PGR
Sbjct: 201 AVLLAVAGGAQLADVERPARPGR 133
Score = 91.3 bits (193), Expect(3) = 3e-054
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / -3
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 564 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 385
Query: 388 TMIL 377
T++L
Sbjct: 384 TLVL 373
Score = 68.9 bits (144), Expect(5) = 2e-028
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +2
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 383 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 511
Score = 68.4 bits (143), Expect(2) = 2e-023
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / -2
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRRTP PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 244 CRRTPTSMPPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 125
Score = 63.4 bits (132), Expect(2) = 2e-023
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -2
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 382 PCTGSGPWSPADCRPPGWSRRPC 314
Score = 47.8 bits (98), Expect(5) = 2e-028
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +2
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 317 RAT*PSRWTAICWRPRT*ASTRV 385
Score = 45.5 bits (93), Expect(3) = 3e-054
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / -3
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 684 RVAHVDAVRVGAVPGRRDRHILNQ 613
Score = 39.1 bits (79), Expect(3) = e-124
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +1
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 25 KMACTGNAMRAFFLLAFVCAAH 90
Score = 35.4 bits (71), Expect(3) = e-115
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -2
Query: 104 PSHHARCRRALEGTRLSLHCLYMP 33
PS HAR RR G RLS HCL P
Sbjct: 100 PSQHARRRRTPGGRRLSSHCLCTP 29
Score = 35.0 bits (70), Expect(3) = 8e-091
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1 / +3
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGK 108
+ ++G++RQC+ESL+P L RA EG+
Sbjct: 18 TNKNGVHRQCDESLLPPGVRLRRACWEGR 104
Score = 30.9 bits (61), Expect(5) = 2e-028
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +2
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 644 GTAPTRTASTW 676
Score = 30.4 bits (60), Expect(5) = 2e-028
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +2
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 128 KRRPGLAGRSTSASWAP 178
Score = 29.5 bits (58), Expect(5) = 2e-028
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3 / +2
Query: 30 RWHV*TMQ*EPCSF*RSSAPCMVRRQSQRTTIQKRPGP 143
+W M+*EP S RSSAP M+ R T ++ P
Sbjct: 26 KWRAQAMR*EPSSSWRSSAPRMLGRTLLPRTAMRKRRP 139
>gb|CF480256.1|CF480256 POL1_64_D11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_D11_A002 5', mRNA sequence
Length = 691
Score = 214 bits (461), Expect(4) = e-123
Identities = 85/92 (92%), Positives = 90/92 (97%)
Frame = +2 / +2
Query: 542 NGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIG 721
NGEVSGITLLN+KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVTI NTVIG
Sbjct: 413 NGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIG 592
Query: 722 VGDDCISIGPGTSKVNITGVTCGPGHGISIGS 817
VGDDCISIGPGT+KVNITGVTCGPGHGISIGS
Sbjct: 593 VGDDCISIGPGTTKVNITGVTCGPGHGISIGS 688
Score = 196 bits (423), Expect(4) = e-112
Identities = 80/91 (87%), Positives = 82/91 (90%)
Frame = -2 / -2
Query: 816 LPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAV 637
LPMLMPWPGP VTPVMFTL VPGPMEMQSSPTPMTV MVTPDESPMWMPSVLGLSPGAV
Sbjct: 687 LPMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAV 508
Query: 636 TLTSLISMSLHLYMFMWKNLELSSVIPDTSP 544
T+TSLI+MSLH FMWKNL SSVIPDTSP
Sbjct: 507 TVTSLINMSLHWNTFMWKNLAFSSVIPDTSP 415
Score = 129 bits (276), Expect(4) = e-123
Identities = 50/58 (86%), Positives = 52/58 (89%)
Frame = +2 / +3
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSG 559
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+V G G
Sbjct: 258 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVKTGRCPG 431
Score = 123 bits (264), Expect(4) = e-112
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = -2 / -1
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHAD 226
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD
Sbjct: 256 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHAD 104
Score = 123 bits (263), Expect(4) = 5e-072
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +2 / +3
Query: 227 SACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYK 379
SACGGTGKQTILIPKGD+LVGPLNFTGPCKGDVTIQV+GNLLATTDLSQYK
Sbjct: 105 SACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQVDGNLLATTDLSQYK 257
Score = 123 bits (263), Expect(4) = e-123
Identities = 48/61 (78%), Positives = 51/61 (83%)
Frame = +1 / +2
Query: 199 HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPMQGRRDHPGEWQSAGDHGPKPVQ 378
H G +GVRRHREADDPHP GRLPRRTTQLHRP+QGRRDHPG QSAGDHGP+PVQ
Sbjct: 77 HAGKDAPAKVGVRRHREADDPHP*GRLPRRTTQLHRPVQGRRDHPGGRQSAGDHGPEPVQ 256
Query: 379 G 381
G
Sbjct: 257 G 259
Score = 115 bits (245), Expect(4) = e-112
Identities = 49/58 (84%), Positives = 51/58 (87%)
Frame = -2 / -1
Query: 558 PDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTRRISIQLP 385
P P+FT S TSELGRILQSYFL EFLLHTAGPCPSSFPLPV+TRLSTRRISIQLP
Sbjct: 430 PGHLPVFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 257
Score = 100 bits (212), Expect(5) = 2e-046
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = -1 / -3
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARR 227
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR
Sbjct: 257 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARR 105
Score = 90.9 bits (192), Expect(4) = 5e-072
Identities = 40/51 (78%), Positives = 43/51 (84%)
Frame = +1 / +2
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLRE 540
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLRE
Sbjct: 260 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLRE 412
Score = 85.4 bits (180), Expect(4) = 5e-072
Identities = 34/45 (75%), Positives = 36/45 (80%)
Frame = +1 / +1
Query: 541 QRGGVRDHAAQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
+RGGVRDHAA+ QVLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 412 KRGGVRDHAAKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 546
Score = 68.9 bits (144), Expect(4) = 3e-024
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +1
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 259 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 387
Score = 67.0 bits (140), Expect(5) = 2e-046
Identities = 29/57 (50%), Positives = 35/57 (61%)
Frame = -1 / -3
Query: 547 PVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPITMIL 377
P H V HQRVG+ APHG LPVEL LAGD +VVH +LDP+T++L
Sbjct: 419 PRFHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 249
Score = 47.8 bits (98), Expect(4) = 3e-024
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +1
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 193 RAT*PSRWTAICWRPRT*ASTRV 261
Score = 45.5 bits (93), Expect(5) = 2e-046
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / -1
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 559 RVAHVDAVRVGAVPGRRDRHILNQ 488
Score = 38.2 bits (77), Expect(4) = e-123
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +2
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 14 KMACTCNAMRAFFLLAFVCAAH 79
Score = 32.7 bits (65), Expect(4) = e-112
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -3 / -3
Query: 104 PSHHARCRRALEGTRLSLHCLYMP 33
PS HAR RR G RLS HC P
Sbjct: 89 PSQHARRRRTPGGRRLSSHCKCTP 18
Score = 31.8 bits (63), Expect(4) = 5e-072
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1 / +1
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGK 108
+ ++G++ QC+ESL+P L RA EG+
Sbjct: 7 TNKNGVHLQCDESLLPPGVRLRRACWEGR 93
Score = 30.9 bits (61), Expect(4) = 3e-024
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 519 GTAPTRTASTW 551
Score = 28.1 bits (55), Expect(4) = 3e-024
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3 / +3
Query: 30 RWHV*TMQ*EPCSF*RSSAPCMVRR 104
+W M+*EP S RSSAP M+ R
Sbjct: 15 KWRALAMR*EPSSSWRSSAPRMLGR 89
Score = 26.7 bits (52), Expect(5) = 2e-046
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 568 QRDPGHLPV 542
QRDPGHLPV
Sbjct: 439 QRDPGHLPV 413
Score = 23.1 bits (44), Expect(5) = 2e-046
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -3 / -2
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRR 171
CRRTP + P+C + +R+
Sbjct: 120 CRRTPTLAGASFPACAAQTNARRK 49
>gb|CF489443.1|CF489443 POL1_57_D04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_D04_A002 5', mRNA sequence
Length = 711
Score = 259 bits (559), Expect(3) = e-123
Identities = 102/112 (91%), Positives = 109/112 (97%)
Frame = +2 / +1
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKG+LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 376 GNWIEILRVDNLVITGKGRLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 555
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIG 721
LLN+KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVTI NTVIG
Sbjct: 556 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIG 711
Score = 227 bits (491), Expect(3) = e-114
Identities = 97/112 (86%), Positives = 100/112 (89%)
Frame = -2 / -2
Query: 720 PMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVIPDTSPL 541
PMTV MVTPDESPMWMPSVLGLSPGAVT+TSLI+MSLH FMWKNL SSVIPDTSPL
Sbjct: 710 PMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPL 531
Query: 540 FTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTRRISIQLP 385
FT S TSELGRILQSYFL EFLLHTAGPCPSS PLPV+TRLSTRRISIQLP
Sbjct: 530 FT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSLPLPVITRLSTRRISIQLP 375
Score = 190 bits (410), Expect(3) = e-114
Identities = 76/83 (91%), Positives = 77/83 (92%)
Frame = -2 / -2
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAFV
Sbjct: 374 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFV 195
Query: 198 LSVLPLPEAPNLVMSKDPPGPDA 130
LS LP PEAPNL+MS DPPGPDA
Sbjct: 194 LSFLPSPEAPNLLMSNDPPGPDA 126
Score = 187 bits (402), Expect(3) = e-123
Identities = 75/81 (92%), Positives = 79/81 (97%)
Frame = +2 / +1
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVGPLNFTGPCK
Sbjct: 133 GPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCK 312
Query: 317 GDVTIQVNGNLLATTDLSQYK 379
GDVTIQV+GNLLATTDLSQYK
Sbjct: 313 GDVTIQVDGNLLATTDLSQYK 375
Score = 175 bits (376), Expect(3) = 8e-091
Identities = 75/96 (78%), Positives = 79/96 (82%)
Frame = +1 / +3
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 378 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 557
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
A+ QVLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 558 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 665
Score = 166 bits (356), Expect(3) = 8e-091
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +3
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPM 312
VRA V+RH QVGRL + Q+G HEGCAGG+ +GVRRHREADDPHP GRLPRRTTQLHRP+
Sbjct: 129 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 308
Query: 313 QGRRDHPGEWQSAGDHGPKPVQG 381
QGRRDHPG QSAGDHGP+PVQG
Sbjct: 309 QGRRDHPGGRQSAGDHGPEPVQG 377
Score = 116 bits (248), Expect(3) = 3e-053
Identities = 56/83 (67%), Positives = 57/83 (68%)
Frame = -1 / -1
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCPXXXXXXX 200
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 375 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHSLR 196
Query: 199 XXXXXXXXXAQLGDVEGPTGPGR 131
AQL DVE P PGR
Sbjct: 195 AVLLAVAGGAQLADVERPARPGR 127
Score = 88.1 bits (186), Expect(3) = 3e-053
Identities = 37/64 (57%), Positives = 43/64 (67%)
Frame = -1 / -1
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVE LAGD +VVH +LDP+
Sbjct: 558 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVEPPLAGDHQVVHTQDLDPV 379
Query: 388 TMIL 377
T++L
Sbjct: 378 TLVL 367
Score = 68.4 bits (143), Expect(2) = 2e-023
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / -3
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRRTP PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 238 CRRTPTSMPPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 119
Score = 67.0 bits (140), Expect(5) = 8e-028
Identities = 30/43 (69%), Positives = 30/43 (69%)
Frame = +3 / +2
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR STGR PCGART A RSTTARS P
Sbjct: 377 VTGSRSCVWTTW*SPARGGSTGRAPPCGARTRAPRSTTARSCP 505
Score = 63.4 bits (132), Expect(2) = 2e-023
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -3
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 376 PCTGSGPWSPADCRPPGWSRRPC 308
Score = 47.8 bits (98), Expect(5) = 8e-028
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +2
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 311 RAT*PSRWTAICWRPRT*ASTRV 379
Score = 45.5 bits (93), Expect(3) = 3e-053
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / -1
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 678 RVAHVDAVRVGAVPGRRDRHILNQ 607
Score = 39.1 bits (79), Expect(3) = e-123
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +1
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 19 KMACTGNAMRAFFLLAFVCAAH 84
Score = 35.4 bits (71), Expect(3) = e-114
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -3
Query: 104 PSHHARCRRALEGTRLSLHCLYMP 33
PS HAR RR G RLS HCL P
Sbjct: 94 PSQHARRRRTPGGRRLSSHCLCTP 23
Score = 35.0 bits (70), Expect(3) = 8e-091
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1 / +3
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGK 108
+ ++G++RQC+ESL+P L RA EG+
Sbjct: 12 TNKNGVHRQCDESLLPPGVRLRRACWEGR 98
Score = 30.9 bits (61), Expect(5) = 8e-028
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +2
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 638 GTAPTRTASTW 670
Score = 30.4 bits (60), Expect(5) = 8e-028
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +2
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 122 KRRPGLAGRSTSASWAP 172
Score = 29.5 bits (58), Expect(5) = 8e-028
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3 / +2
Query: 30 RWHV*TMQ*EPCSF*RSSAPCMVRRQSQRTTIQKRPGP 143
+W M+*EP S RSSAP M+ R T ++ P
Sbjct: 20 KWRAQAMR*EPSSSWRSSAPRMLGRTLLPRTAMRKRRP 133
>gb|CF480747.1|CF480747 POL1_67_D09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_D09_A002 5', mRNA sequence
Length = 748
Score = 182 bits (391), Expect(5) = e-121
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +2 / +3
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+V NGEVSGIT
Sbjct: 378 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVTNGEVSGIT 557
Query: 566 LLNSKFFHMNMYKCKDML 619
LLN+KFFHMN+++CKDML
Sbjct: 558 LLNAKFFHMNVFQCKDML 611
Score = 154 bits (330), Expect(5) = e-113
Identities = 62/66 (93%), Positives = 62/66 (93%)
Frame = -2 / -1
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAFV
Sbjct: 376 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFV 197
Query: 198 LSVLPL 181
LS LPL
Sbjct: 196 LSFLPL 179
Score = 154 bits (330), Expect(5) = e-113
Identities = 66/78 (84%), Positives = 68/78 (87%)
Frame = -2 / -1
Query: 618 SMSLHLYMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSF 439
+MSLH FMWKNL SSVIPDTSPL T S TSELGRILQSYFL EFLLHTAGPCPSSF
Sbjct: 610 NMSLHWNTFMWKNLAFSSVIPDTSPLVT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSF 431
Query: 438 PLPVMTRLSTRRISIQLP 385
PLPV+TRLSTRRISIQLP
Sbjct: 430 PLPVITRLSTRRISIQLP 377
Score = 152 bits (327), Expect(5) = e-121
Identities = 61/66 (92%), Positives = 64/66 (96%)
Frame = +2 / +3
Query: 182 NGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATT 361
+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVGPLNFTGPCKGDVTIQV+GNLLATT
Sbjct: 180 SGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQVDGNLLATT 359
Query: 362 DLSQYK 379
DLSQYK
Sbjct: 360 DLSQYK 377
Score = 145 bits (312), Expect(5) = 3e-083
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = +1 / +2
Query: 187 QDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPMQGRRDHPGEWQSAGDHGP 366
Q+G HEGCAGG+ +GVRRHREADDPHP GRLPRRTTQLHRP+QGRRDHPG QSAGDHGP
Sbjct: 185 QEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPVQGRRDHPGGRQSAGDHGP 364
Query: 367 KPVQG 381
+PVQG
Sbjct: 365 EPVQG 379
Score = 140 bits (300), Expect(5) = 3e-083
Identities = 60/76 (78%), Positives = 65/76 (85%)
Frame = +1 / +2
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLR+QRGGVRDHA
Sbjct: 380 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLRDQRGGVRDHA 559
Query: 568 AQLQVLPHEHVQVQGH 615
A+ QVLPHE V VQGH
Sbjct: 560 AKRQVLPHERVPVQGH 607
Score = 104 bits (222), Expect(5) = e-121
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = +2 / +2
Query: 620 IKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPG 754
++DV VTAPGDSPNTDGIHMGDSSGVTI NTVIGVGDDCISIGPG
Sbjct: 614 LRDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPG 748
Score = 101 bits (216), Expect(5) = 1e-059
Identities = 46/53 (86%), Positives = 47/53 (88%)
Frame = -1 / -3
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCP 221
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 377 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRP 219
Score = 101 bits (216), Expect(5) = e-113
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = -2 / -2
Query: 753 PGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSL 622
PGPMEMQSSPTPMTV MVTPDESPMWMPSVLGLSPGAVT+TSL
Sbjct: 747 PGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSL 616
Score = 88.1 bits (186), Expect(5) = 1e-059
Identities = 37/64 (57%), Positives = 43/64 (67%)
Frame = -1 / -3
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPV H V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 560 QRDPGHLPVGHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 381
Query: 388 TMIL 377
T++L
Sbjct: 380 TLVL 369
Score = 68.9 bits (144), Expect(5) = 3e-027
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +1
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 379 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 507
Score = 47.8 bits (98), Expect(5) = 1e-059
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = -3 / -2
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRR 171
CRRTP PPAQPSC PSC +RR
Sbjct: 240 CRRTPTSMPPAQPSCCPSCRFRRR 169
Score = 47.8 bits (98), Expect(5) = 3e-027
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +1
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 313 RAT*PSRWTAICWRPRT*ASTRV 381
Score = 42.3 bits (86), Expect(5) = e-113
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -2 / -1
Query: 180 PEAPNLVMSKDPPGPDA 130
PEAPNL+MS DPPGPDA
Sbjct: 175 PEAPNLLMSNDPPGPDA 125
Score = 41.8 bits (85), Expect(5) = 1e-059
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -1 / -1
Query: 688 RVAHVDAVRVGAVPGRR 638
RVAHVDAVRVGAVPGRR
Sbjct: 682 RVAHVDAVRVGAVPGRR 632
Score = 39.1 bits (79), Expect(5) = e-121
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +3
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 18 KMACTGNAMRAFFLLAFVCAAH 83
Score = 37.3 bits (75), Expect(5) = e-121
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2 / +3
Query: 137 GPGGSFDITKLGASG 181
GPGGSFDI+KLGASG
Sbjct: 132 GPGGSFDISKLGASG 176
Score = 35.9 bits (72), Expect(5) = 3e-083
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1 / +1
Query: 640 GARGQPQHGRHP 675
GARGQPQHGRHP
Sbjct: 634 GARGQPQHGRHP 669
Score = 35.4 bits (71), Expect(5) = e-113
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -2
Query: 104 PSHHARCRRALEGTRLSLHCLYMP 33
PS HAR RR G RLS HCL P
Sbjct: 93 PSQHARRRRTPGGRRLSSHCLCTP 22
Score = 35.0 bits (70), Expect(5) = 3e-083
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1 / +2
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGK 108
+ ++G++RQC+ESL+P L RA EG+
Sbjct: 11 TNKNGVHRQCDESLLPPGVRLRRACWEGR 97
Score = 30.9 bits (61), Expect(5) = 3e-027
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 642 GTAPTRTASTW 674
Score = 30.9 bits (61), Expect(5) = 3e-027
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3 / +1
Query: 30 RWHV*TMQ*EPCSF*RSSAPCMVRRQSQRTTIQKRPGP 143
+W M+*EP S RSSAP M+ R T +R P
Sbjct: 19 KWRAQAMR*EPSSSWRSSAPRMLGRTLLPRTAMRRRRP 132
Score = 30.4 bits (60), Expect(5) = 3e-083
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 121 RRRPGLAGRSTSASWAP 171
Score = 28.1 bits (55), Expect(5) = 1e-059
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3 / -2
Query: 179 QRRPTW*CRRTHRART 132
+RRPT *CR T +ART
Sbjct: 174 RRRPTC*CRTTRQART 127
Score = 25.4 bits (49), Expect(5) = 3e-027
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1 / +2
Query: 133 VRARWVLRHHQVGRL 177
VRA V+RH QVGRL
Sbjct: 128 VRAWRVVRHQQVGRL 172
>gb|CF483347.1|CF483347 POL1_21_D07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_21_D07_A002 5', mRNA sequence
Length = 709
Score = 249 bits (538), Expect(3) = e-119
Identities = 98/106 (92%), Positives = 104/106 (98%)
Frame = +2 / +3
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 390 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 569
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTI 703
LLN+KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVTI
Sbjct: 570 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTI 707
Score = 221 bits (478), Expect(3) = e-111
Identities = 94/106 (88%), Positives = 97/106 (91%)
Frame = -2 / -1
Query: 702 MVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVIPDTSPLFTKSIT 523
MVTPDESPMWMPSVLGLSPGAVT+TSLI+MSLH FMWKNL SSVIPDTSPLFT S T
Sbjct: 706 MVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SST 527
Query: 522 SELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTRRISIQLP 385
SELGRILQSYFL EFLLHTAGPCPSSFPLPV+TRLSTRRISIQLP
Sbjct: 526 SELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 389
Score = 187 bits (402), Expect(3) = e-111
Identities = 75/83 (90%), Positives = 76/83 (91%)
Frame = -2 / -1
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVC PVPPHAD HASCTAFV
Sbjct: 388 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCSPVPPHADVHASCTAFV 209
Query: 198 LSVLPLPEAPNLVMSKDPPGPDA 130
LS LP PEAPNL+MS DPPGPDA
Sbjct: 208 LSFLPSPEAPNLLMSNDPPGPDA 140
Score = 185 bits (398), Expect(3) = e-119
Identities = 74/81 (91%), Positives = 79/81 (97%)
Frame = +2 / +3
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTG+QTILIPKGD+LVGPLNFTGPCK
Sbjct: 147 GPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGEQTILIPKGDYLVGPLNFTGPCK 326
Query: 317 GDVTIQVNGNLLATTDLSQYK 379
GDVTIQV+GNLLATTDLSQYK
Sbjct: 327 GDVTIQVDGNLLATTDLSQYK 389
Score = 175 bits (376), Expect(3) = 2e-089
Identities = 75/96 (78%), Positives = 79/96 (82%)
Frame = +1 / +2
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 392 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 571
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
A+ QVLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 572 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 679
Score = 162 bits (349), Expect(3) = 2e-089
Identities = 65/83 (78%), Positives = 72/83 (86%)
Frame = +1 / +2
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPM 312
VRA V+RH QVGRL + Q+G HEGCAGG+ +GVRRHR ADDPHP GRLPRRTTQLHRP+
Sbjct: 143 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHRGADDPHP*GRLPRRTTQLHRPV 322
Query: 313 QGRRDHPGEWQSAGDHGPKPVQG 381
QGRRDHPG QSAGDHGP+PVQG
Sbjct: 323 QGRRDHPGGRQSAGDHGPEPVQG 391
Score = 116 bits (248), Expect(3) = 3e-054
Identities = 56/83 (67%), Positives = 57/83 (68%)
Frame = -1 / -3
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCPXXXXXXX 200
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 389 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHSLR 210
Query: 199 XXXXXXXXXAQLGDVEGPTGPGR 131
AQL DVE P PGR
Sbjct: 209 AVLLAVAGGAQLADVERPARPGR 141
Score = 91.3 bits (193), Expect(3) = 3e-054
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / -3
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 572 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 393
Query: 388 TMIL 377
T++L
Sbjct: 392 TLVL 381
Score = 68.9 bits (144), Expect(5) = 2e-028
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +1
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 391 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 519
Score = 68.4 bits (143), Expect(2) = 2e-023
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / -2
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRRTP PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 252 CRRTPTSMPPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 133
Score = 63.4 bits (132), Expect(2) = 2e-023
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -2
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 390 PCTGSGPWSPADCRPPGWSRRPC 322
Score = 47.8 bits (98), Expect(5) = 2e-028
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +1
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 325 RAT*PSRWTAICWRPRT*ASTRV 393
Score = 45.5 bits (93), Expect(3) = 3e-054
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / -3
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 692 RVAHVDAVRVGAVPGRRDRHILNQ 621
Score = 38.2 bits (77), Expect(3) = e-119
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +3
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 33 KMACRGNAMRAFFLLAFVCAAH 98
Score = 35.4 bits (71), Expect(3) = e-111
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -2
Query: 104 PSHHARCRRALEGTRLSLHCLYMP 33
PS HAR RR G RLS HCL P
Sbjct: 108 PSQHARRRRTPGGRRLSSHCLCTP 37
Score = 33.6 bits (67), Expect(3) = 2e-089
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1 / +2
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGK 108
+ ++G+ RQC+ESL+P L RA EG+
Sbjct: 26 TNKNGVQRQCDESLLPPGVRLRRACWEGR 112
Score = 30.9 bits (61), Expect(5) = 2e-028
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +1
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 652 GTAPTRTASTW 684
Score = 30.4 bits (60), Expect(5) = 2e-028
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 136 KRRPGLAGRSTSASWAP 186
Score = 29.5 bits (58), Expect(5) = 2e-028
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3 / +1
Query: 30 RWHV*TMQ*EPCSF*RSSAPCMVRRQSQRTTIQKRPGP 143
+W M+*EP S RSSAP M+ R T ++ P
Sbjct: 34 KWRAEAMR*EPSSSWRSSAPRMLGRTLLPRTAMRKRRP 147
>gb|CF481397.1|CF481397 POL1_71_F02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_71_F02_A002 5', mRNA sequence
Length = 693
Score = 244 bits (528), Expect(3) = e-119
Identities = 96/106 (90%), Positives = 104/106 (98%)
Frame = +2 / +3
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VN+GEVSGIT
Sbjct: 375 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNDGEVSGIT 554
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTI 703
LLN+KFFHMN+++CKDMLIKDV VTAPGDSP+TDGIHMGDSSGVTI
Sbjct: 555 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPHTDGIHMGDSSGVTI 692
Score = 216 bits (466), Expect(3) = e-110
Identities = 92/106 (86%), Positives = 95/106 (89%)
Frame = -2 / -3
Query: 702 MVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVIPDTSPLFTKSIT 523
MVTPDESPMWMPSV GLSPGAVT+TSLI+MSLH FMWKNL SSVIPDTSP FT S T
Sbjct: 691 MVTPDESPMWMPSVWGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPSFT*SST 512
Query: 522 SELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTRRISIQLP 385
SELGRILQSYFL EFLLHTAGPCPSSFPLPV+TRLSTRRISIQLP
Sbjct: 511 SELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 374
Score = 190 bits (410), Expect(3) = e-110
Identities = 76/83 (91%), Positives = 77/83 (92%)
Frame = -2 / -3
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAFV
Sbjct: 373 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFV 194
Query: 198 LSVLPLPEAPNLVMSKDPPGPDA 130
LS LP PEAPNL+MS DPPGPDA
Sbjct: 193 LSFLPSPEAPNLLMSNDPPGPDA 125
Score = 187 bits (402), Expect(3) = e-119
Identities = 75/81 (92%), Positives = 79/81 (97%)
Frame = +2 / +3
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVGPLNFTGPCK
Sbjct: 132 GPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCK 311
Query: 317 GDVTIQVNGNLLATTDLSQYK 379
GDVTIQV+GNLLATTDLSQYK
Sbjct: 312 GDVTIQVDGNLLATTDLSQYK 374
Score = 170 bits (366), Expect(3) = 2e-089
Identities = 73/96 (76%), Positives = 78/96 (81%)
Frame = +1 / +2
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLRE+RGGVRDHA
Sbjct: 377 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLRERRGGVRDHA 556
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
A+ QVLPHE V VQGH D G GARGQP HGRHP
Sbjct: 557 AKRQVLPHERVPVQGHVD*GCDGHGARGQPPHGRHP 664
Score = 166 bits (356), Expect(3) = 2e-089
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +2
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPM 312
VRA V+RH QVGRL + Q+G HEGCAGG+ +GVRRHREADDPHP GRLPRRTTQLHRP+
Sbjct: 128 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 307
Query: 313 QGRRDHPGEWQSAGDHGPKPVQG 381
QGRRDHPG QSAGDHGP+PVQG
Sbjct: 308 QGRRDHPGGRQSAGDHGPEPVQG 376
Score = 116 bits (248), Expect(3) = 3e-054
Identities = 56/83 (67%), Positives = 57/83 (68%)
Frame = -1 / -2
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCPXXXXXXX 200
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 374 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHSLR 195
Query: 199 XXXXXXXXXAQLGDVEGPTGPGR 131
AQL DVE P PGR
Sbjct: 194 AVLLAVAGGAQLADVERPARPGR 126
Score = 91.3 bits (193), Expect(3) = 3e-054
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / -2
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 557 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 378
Query: 388 TMIL 377
T++L
Sbjct: 377 TLVL 366
Score = 68.9 bits (144), Expect(5) = 2e-028
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +1
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 376 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 504
Score = 68.4 bits (143), Expect(2) = 2e-023
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / -1
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRRTP PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 237 CRRTPTSMPPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 118
Score = 63.4 bits (132), Expect(2) = 2e-023
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -1
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 375 PCTGSGPWSPADCRPPGWSRRPC 307
Score = 47.8 bits (98), Expect(5) = 2e-028
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +1
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 310 RAT*PSRWTAICWRPRT*ASTRV 378
Score = 45.5 bits (93), Expect(3) = 3e-054
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / -2
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 677 RVAHVDAVRVGAVPGRRDRHILNQ 606
Score = 39.1 bits (79), Expect(3) = e-119
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +3
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 18 KMACTGNAMRAFFLLAFVCAAH 83
Score = 35.4 bits (71), Expect(3) = e-110
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -1
Query: 104 PSHHARCRRALEGTRLSLHCLYMP 33
PS HAR RR G RLS HCL P
Sbjct: 93 PSQHARRRRTPGGRRLSSHCLCTP 22
Score = 35.0 bits (70), Expect(3) = 2e-089
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1 / +2
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGK 108
+ ++G++RQC+ESL+P L RA EG+
Sbjct: 11 TNKNGVHRQCDESLLPPGVRLRRACWEGR 97
Score = 30.9 bits (61), Expect(5) = 2e-028
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +1
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 637 GTAPTRTASTW 669
Score = 30.4 bits (60), Expect(5) = 2e-028
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 121 KRRPGLAGRSTSASWAP 171
Score = 29.5 bits (58), Expect(5) = 2e-028
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3 / +1
Query: 30 RWHV*TMQ*EPCSF*RSSAPCMVRRQSQRTTIQKRPGP 143
+W M+*EP S RSSAP M+ R T ++ P
Sbjct: 19 KWRAQAMR*EPSSSWRSSAPRMLGRTLLPRTAMRKRRP 132
>gb|CL196999.1|CL196999 104_423_10943444_114_32326_070 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943444, DNA
sequence
Length = 699
Score = 421 bits (913), Expect(2) = e-117
Identities = 169/207 (81%), Positives = 188/207 (90%)
Frame = +2 / +1
Query: 518 SLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGV 697
+LV+DF NN VSGITLLNSKFFHMN+++CK + IKDV VTAPGDSPNTDGIH+GDSS V
Sbjct: 61 TLVLDFCNNATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKV 240
Query: 698 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 877
TIT T IGVGDDCISIGPG++ +N+TGVTCGPGHGIS+GSLGRYKDEKDVTDINVKDCTL
Sbjct: 241 TITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTL 420
Query: 878 KKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTV 1057
KKT+NGVRIK+YEDAA V+TASK+HYENI M+D PIIIDMKYCPNK+CTA G SKVTV
Sbjct: 421 KKTSNGVRIKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKICTAKGDSKVTV 600
Query: 1058 KDVTFKNITGTSSTPEAVNLLCSAKIP 1138
KDVTFKNITGTSSTPEAV+LLCS K P
Sbjct: 601 KDVTFKNITGTSSTPEAVSLLCSEKSP 681
Score = 343 bits (744), Expect(2) = 1e-093
Identities = 156/206 (75%), Positives = 168/206 (81%)
Frame = -2 / -2
Query: 1137 GILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIF 958
G +EQSRLTASGV+EVPVMFL VTSLTVTLE+PLAV LLGQYFMSMMMG SS+ +F
Sbjct: 680 GDFSEQSRLTASGVDEVPVMFLNVTSLTVTLESPLAVQILLGQYFMSMMMGLATSSMAMF 501
Query: 957 S*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVT 778
S*W LEAV T AASS L+RTPL VFLSVQSLTL+SVTSFSSLY PRLP LMPWPGPQVT
Sbjct: 500 S*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQVT 321
Query: 777 PVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLY 598
PV +PGPMEMQSSPTPM V VMVT +ESPMWMPSVLGLSPGAVT+TSLI LH
Sbjct: 320 PVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMPSVLGLSPGAVTVTSLIVTPLHWN 141
Query: 597 MFMWKNLELSSVIPDTSPLFTKSITS 520
FMWKNLE S VIP+T L KS T+
Sbjct: 140 TFMWKNLEFSRVIPETVALLQKSSTN 63
Score = 100 bits (214), Expect(4) = 3e-040
Identities = 45/70 (64%), Positives = 50/70 (71%)
Frame = +1 / +3
Query: 826 VQGREGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL*EYQDGGLGLPHHHRHE 1005
VQG EG G+QRQGLHA ED Q RP Q + GRR+R H LQ PL E+ G G PHHHRHE
Sbjct: 369 VQG*EGCDGHQRQGLHAQEDQQWRPDQVLRGRRVRDHCLQAPLREHSHGRRGQPHHHRHE 548
Query: 1006 VLPQQVMHRQ 1035
VLPQQ +H Q
Sbjct: 549 VLPQQDLHCQ 578
Score = 74.4 bits (156), Expect(4) = 3e-040
Identities = 32/51 (62%), Positives = 35/51 (68%)
Frame = +1 / +3
Query: 523 GDGLREQRGGVRDHAAQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
G L +QR +RDH A+LQVLPHE V VQ DQGR ARGQPQH RHP
Sbjct: 66 GARLLQQRHRLRDHPAELQVLPHERVPVQRRDDQGRDRHRARGQPQHRRHP 218
Score = 71.2 bits (149), Expect(3) = 1e-021
Identities = 35/68 (51%), Positives = 37/68 (54%)
Frame = -3 / -3
Query: 1028 CITCWGSTSCR**WGXXXXXXXXXXXXSWXXXXXXXRPHTP*CGRRWPSS*ACSP*R*YP 849
C +CWGSTSCR**WG +W RP * GR SS*ACSP*R* P
Sbjct: 571 CRSCWGSTSCR**WGWPRRPWLCSRSGAWRQ*SRTRRPRRT*SGRHCWSS*ACSP*R*CP 392
Query: 848 *RPSRPCT 825
PS PCT
Sbjct: 391 SHPSHPCT 368
Score = 48.3 bits (99), Expect(3) = 1e-021
Identities = 26/57 (45%), Positives = 30/57 (52%)
Frame = -1 / -1
Query: 685 VAHVDAVRVGAVPGRRHIDVLDQXXXXXXXXXXXXXXXEQRDPGHLPVVHEVHHQRV 515
V +VDAV VGAVPGR VLD+ +Q DPG VV EV HQR+
Sbjct: 228 VTNVDAVGVGAVPGRGDGHVLDRHAFALEHVHVEELGVQQGDPGDGGVVAEVEHQRL 58
Score = 25.8 bits (50), Expect(4) = 3e-040
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 1099 PGGRQPALLCQDP 1137
PGGRQPALL + P
Sbjct: 642 PGGRQPALLRKIP 680
Score = 24.0 bits (46), Expect(2) = e-117
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2 / +3
Query: 1130 KIPCTGVTM 1156
KIPC+GVTM
Sbjct: 672 KIPCSGVTM 698
Score = 23.5 bits (45), Expect(3) = 1e-021
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2 / -2
Query: 795 PGPQVTPVMFTLE 757
P P V PVM TLE
Sbjct: 269 PTPMVVPVMVTLE 231
Score = 22.6 bits (43), Expect(4) = 3e-040
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / +1
Query: 755 TSKVNITGVTCGPG 796
+SKV ITG T G G
Sbjct: 229 SSKVTITGTTIGVG 270
Score = 22.6 bits (43), Expect(2) = 1e-093
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3 / -1
Query: 1157 PW*RRCMG 1134
PW*RRC G
Sbjct: 699 PW*RRCRG 676
>gb|CF488060.1|CF488060 POL1_47_C02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_47_C02_A002 5', mRNA sequence
Length = 682
Score = 237 bits (512), Expect(3) = e-117
Identities = 92/101 (91%), Positives = 99/101 (98%)
Frame = +2 / +3
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 378 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 557
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDS 688
L+N+KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMGDS
Sbjct: 558 LVNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDS 680
Score = 210 bits (454), Expect(3) = e-109
Identities = 89/102 (87%), Positives = 93/102 (91%)
Frame = -2 / -1
Query: 690 DESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVIPDTSPLFTKSITSELG 511
DESPMWMPSVLGLSPGAVT+TSLI+MSLH FMWKNL +SVIPDTSPLFT S TSELG
Sbjct: 682 DESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFTSVIPDTSPLFT*SSTSELG 503
Query: 510 RILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTRRISIQLP 385
RILQSYFL EFLLHTAGPCPSSFPLPV+TRLSTRRISIQLP
Sbjct: 502 RILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 377
Score = 190 bits (410), Expect(3) = e-109
Identities = 76/83 (91%), Positives = 77/83 (92%)
Frame = -2 / -1
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAFV
Sbjct: 376 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFV 197
Query: 198 LSVLPLPEAPNLVMSKDPPGPDA 130
LS LP PEAPNL+MS DPPGPDA
Sbjct: 196 LSFLPSPEAPNLLMSNDPPGPDA 128
Score = 187 bits (402), Expect(3) = e-117
Identities = 75/81 (92%), Positives = 79/81 (97%)
Frame = +2 / +3
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVGPLNFTGPCK
Sbjct: 135 GPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCK 314
Query: 317 GDVTIQVNGNLLATTDLSQYK 379
GDVTIQV+GNLLATTDLSQYK
Sbjct: 315 GDVTIQVDGNLLATTDLSQYK 377
Score = 173 bits (372), Expect(3) = 3e-090
Identities = 74/96 (77%), Positives = 78/96 (81%)
Frame = +1 / +2
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 380 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 559
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
+ QVLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 560 GKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 667
Score = 166 bits (356), Expect(3) = 3e-090
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +2
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPM 312
VRA V+RH QVGRL + Q+G HEGCAGG+ +GVRRHREADDPHP GRLPRRTTQLHRP+
Sbjct: 131 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 310
Query: 313 QGRRDHPGEWQSAGDHGPKPVQG 381
QGRRDHPG QSAGDHGP+PVQG
Sbjct: 311 QGRRDHPGGRQSAGDHGPEPVQG 379
Score = 127 bits (271), Expect(2) = 7e-057
Identities = 57/104 (54%), Positives = 65/104 (62%)
Frame = -1 / -3
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQXXXXXXXXXXXXXXXEQRDPGHLPVVHEVHHQRVGK 509
RVAHVDAVRVGAVPGRR +L+Q QRDPGHLPVVH V HQRVG+
Sbjct: 680 RVAHVDAVRVGAVPGRRDRHILNQHVLALEHVHVEELGVYQRDPGHLPVVHVVQHQRVGQ 501
Query: 508 XXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPITMIL 377
APHG LPVEL LAGD +VVH +LDP+T++L
Sbjct: 500 DLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 369
Score = 116 bits (248), Expect(2) = 7e-057
Identities = 56/83 (67%), Positives = 57/83 (68%)
Frame = -1 / -3
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCPXXXXXXX 200
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 377 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHSLR 198
Query: 199 XXXXXXXXXAQLGDVEGPTGPGR 131
AQL DVE P PGR
Sbjct: 197 AVLLAVAGGAQLADVERPARPGR 129
Score = 68.9 bits (144), Expect(5) = 2e-028
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +1
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 379 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 507
Score = 68.4 bits (143), Expect(2) = 2e-023
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / -2
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRRTP PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 240 CRRTPTSMPPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 121
Score = 63.4 bits (132), Expect(2) = 2e-023
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -2
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 378 PCTGSGPWSPADCRPPGWSRRPC 310
Score = 47.8 bits (98), Expect(5) = 2e-028
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +1
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 313 RAT*PSRWTAICWRPRT*ASTRV 381
Score = 39.1 bits (79), Expect(3) = e-117
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +3
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 21 KMACTGNAMRAFFLLAFVCAAH 86
Score = 35.4 bits (71), Expect(3) = e-109
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -2
Query: 104 PSHHARCRRALEGTRLSLHCLYMP 33
PS HAR RR G RLS HCL P
Sbjct: 96 PSQHARRRRTPGGRRLSSHCLCTP 25
Score = 35.0 bits (70), Expect(3) = 3e-090
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1 / +2
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGK 108
+ ++G++RQC+ESL+P L RA EG+
Sbjct: 14 TNKNGVHRQCDESLLPPGVRLRRACWEGR 100
Score = 30.9 bits (61), Expect(5) = 2e-028
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +1
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 640 GTAPTRTASTW 672
Score = 30.4 bits (60), Expect(5) = 2e-028
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 124 KRRPGLAGRSTSASWAP 174
Score = 29.5 bits (58), Expect(5) = 2e-028
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3 / +1
Query: 30 RWHV*TMQ*EPCSF*RSSAPCMVRRQSQRTTIQKRPGP 143
+W M+*EP S RSSAP M+ R T ++ P
Sbjct: 22 KWRAQAMR*EPSSSWRSSAPRMLGRTLLPRTAMRKRRP 135
>gb|CW270778.1|CW270778 104_742_11402626_148_35337_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402626, DNA
sequence
Length = 671
Score = 415 bits (900), Expect = e-114
Identities = 166/202 (82%), Positives = 185/202 (91%)
Frame = +2 / +1
Query: 518 SLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGV 697
+LV+DF NN VSGITLLNSKFFHMN+++CK + IKDV VTAPGDSPNTDGIH+GDSS V
Sbjct: 64 TLVLDFCNNATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKV 243
Query: 698 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 877
TIT T IGVGDDCISIGPG++ +N+TGVTCGPGHGIS+GSLGRYKDEKDVTDINVKDCTL
Sbjct: 244 TITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTL 423
Query: 878 KKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTV 1057
KKT+NGVRIK+YEDAA V+TASK+HYENI M+D PIIIDMKYCPNK+CTA G SKVTV
Sbjct: 424 KKTSNGVRIKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKICTAKGDSKVTV 603
Query: 1058 KDVTFKNITGTSSTPEAVNLLC 1123
KDVTFKNITGTSSTPEAV+LLC
Sbjct: 604 KDVTFKNITGTSSTPEAVSLLC 669
Score = 341 bits (740), Expect = 1e-092
Identities = 155/202 (76%), Positives = 166/202 (82%)
Frame = -2 / -1
Query: 1125 EQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WI 946
EQSRLTASGV+EVPVMFL VTSLTVTLE+PLAV LLGQYFMSMMMG SS+ +FS*W
Sbjct: 671 EQSRLTASGVDEVPVMFLNVTSLTVTLESPLAVQILLGQYFMSMMMGLATSSMAMFS*WS 492
Query: 945 LEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMF 766
LEAV T AASS L+RTPL VFLSVQSLTL+SVTSFSSLY PRLP LMPWPGPQVTPV
Sbjct: 491 LEAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQVTPVTL 312
Query: 765 TLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMW 586
+PGPMEMQSSPTPM V VMVT +ESPMWMPSVLGLSPGAVT+TSLI LH FMW
Sbjct: 311 IPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMPSVLGLSPGAVTVTSLIVTPLHWNTFMW 132
Query: 585 KNLELSSVIPDTSPLFTKSITS 520
KNLE S VIP+T L KS T+
Sbjct: 131 KNLEFSRVIPETVALLQKSSTN 66
Score = 100 bits (214), Expect(4) = 4e-039
Identities = 45/70 (64%), Positives = 50/70 (71%)
Frame = +1 / +3
Query: 826 VQGREGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL*EYQDGGLGLPHHHRHE 1005
VQG EG G+QRQGLHA ED Q RP Q + GRR+R H LQ PL E+ G G PHHHRHE
Sbjct: 372 VQG*EGCDGHQRQGLHAQEDQQWRPDQVLRGRRVRDHCLQAPLREHSHGRRGQPHHHRHE 551
Query: 1006 VLPQQVMHRQ 1035
VLPQQ +H Q
Sbjct: 552 VLPQQDLHCQ 581
Score = 74.4 bits (156), Expect(4) = 4e-039
Identities = 32/51 (62%), Positives = 35/51 (68%)
Frame = +1 / +3
Query: 523 GDGLREQRGGVRDHAAQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
G L +QR +RDH A+LQVLPHE V VQ DQGR ARGQPQH RHP
Sbjct: 69 GARLLQQRHRLRDHPAELQVLPHERVPVQRRDDQGRDRHRARGQPQHRRHP 221
Score = 71.2 bits (149), Expect(3) = 1e-021
Identities = 35/68 (51%), Positives = 37/68 (54%)
Frame = -3 / -2
Query: 1028 CITCWGSTSCR**WGXXXXXXXXXXXXSWXXXXXXXRPHTP*CGRRWPSS*ACSP*R*YP 849
C +CWGSTSCR**WG +W RP * GR SS*ACSP*R* P
Sbjct: 574 CRSCWGSTSCR**WGWPRRPWLCSRSGAWRQ*SRTRRPRRT*SGRHCWSS*ACSP*R*CP 395
Query: 848 *RPSRPCT 825
PS PCT
Sbjct: 394 SHPSHPCT 371
Score = 48.3 bits (99), Expect(3) = 1e-021
Identities = 26/57 (45%), Positives = 30/57 (52%)
Frame = -1 / -3
Query: 685 VAHVDAVRVGAVPGRRHIDVLDQXXXXXXXXXXXXXXXEQRDPGHLPVVHEVHHQRV 515
V +VDAV VGAVPGR VLD+ +Q DPG VV EV HQR+
Sbjct: 231 VTNVDAVGVGAVPGRGDGHVLDRHAFALEHVHVEELGVQQGDPGDGGVVAEVEHQRL 61
Score = 23.5 bits (45), Expect(3) = 1e-021
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2 / -1
Query: 795 PGPQVTPVMFTLE 757
P P V PVM TLE
Sbjct: 272 PTPMVVPVMVTLE 234
Score = 22.6 bits (43), Expect(4) = 4e-039
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / +1
Query: 755 TSKVNITGVTCGPG 796
+SKV ITG T G G
Sbjct: 232 SSKVTITGTTIGVG 273
Score = 22.1 bits (42), Expect(4) = 4e-039
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +3
Query: 1099 PGGRQPALL 1125
PG RQPALL
Sbjct: 645 PGSRQPALL 671
>gb|CL155265.1|CL155265 104_341_10782005_114_31471_101 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782005, DNA
sequence
Length = 706
Score = 215 bits (465), Expect(3) = e-110
Identities = 84/92 (91%), Positives = 90/92 (97%)
Frame = +2 / +1
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 430 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 609
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPN 661
LLN+KFFHMN+++CKDMLIKDV VTAPGDSPN
Sbjct: 610 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPN 705
Score = 190 bits (410), Expect(3) = e-101
Identities = 76/83 (91%), Positives = 77/83 (92%)
Frame = -2 / -3
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAFV
Sbjct: 428 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFV 249
Query: 198 LSVLPLPEAPNLVMSKDPPGPDA 130
LS LP PEAPNL+MS DPPGPDA
Sbjct: 248 LSFLPSPEAPNLLMSNDPPGPDA 180
Score = 187 bits (402), Expect(3) = e-110
Identities = 75/81 (92%), Positives = 79/81 (97%)
Frame = +2 / +1
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVGPLNFTGPCK
Sbjct: 187 GPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCK 366
Query: 317 GDVTIQVNGNLLATTDLSQYK 379
GDVTIQV+GNLLATTDLSQYK
Sbjct: 367 GDVTIQVDGNLLATTDLSQYK 429
Score = 185 bits (399), Expect(3) = e-101
Identities = 80/92 (86%), Positives = 83/92 (90%)
Frame = -2 / -3
Query: 660 LGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQ 481
LGLSPGAVT+TSLI+MSLH FMWKNL SSVIPDTSPLFT S TSELGRILQSYFL
Sbjct: 704 LGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAH 525
Query: 480 EFLLHTAGPCPSSFPLPVMTRLSTRRISIQLP 385
EFLLHTAGPCPSSFPLPV+TRLSTRRISIQLP
Sbjct: 524 EFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 429
Score = 166 bits (356), Expect(3) = 5e-085
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +3
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPM 312
VRA V+RH QVGRL + Q+G HEGCAGG+ +GVRRHREADDPHP GRLPRRTTQLHRP+
Sbjct: 183 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 362
Query: 313 QGRRDHPGEWQSAGDHGPKPVQG 381
QGRRDHPG QSAGDHGP+PVQG
Sbjct: 363 QGRRDHPGGRQSAGDHGPEPVQG 431
Score = 155 bits (334), Expect(3) = 5e-085
Identities = 69/91 (75%), Positives = 73/91 (80%)
Frame = +1 / +3
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 432 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 611
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQ 660
A+ QVLPHE V VQGH D GARGQPQ
Sbjct: 612 AKRQVLPHERVPVQGHVD*RCDGHGARGQPQ 704
Score = 116 bits (248), Expect(3) = 1e-047
Identities = 56/83 (67%), Positives = 57/83 (68%)
Frame = -1 / -2
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCPXXXXXXX 200
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 429 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHSLR 250
Query: 199 XXXXXXXXXAQLGDVEGPTGPGR 131
AQL DVE P PGR
Sbjct: 249 AVLLAVAGGAQLADVERPARPGR 181
Score = 91.3 bits (193), Expect(3) = 1e-047
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / -2
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 612 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 433
Query: 388 TMIL 377
T++L
Sbjct: 432 TLVL 421
Score = 68.9 bits (144), Expect(4) = 2e-024
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +2
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 431 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 559
Score = 68.4 bits (143), Expect(2) = 2e-023
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / -1
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRRTP PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 292 CRRTPTSMPPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 173
Score = 63.4 bits (132), Expect(2) = 2e-023
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -1
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 430 PCTGSGPWSPADCRPPGWSRRPC 362
Score = 47.8 bits (98), Expect(4) = 2e-024
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +2
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 365 RAT*PSRWTAICWRPRT*ASTRV 433
Score = 39.1 bits (79), Expect(3) = e-110
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +1
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 73 KMACTGNAMRAFFLLAFVCAAH 138
Score = 35.4 bits (71), Expect(3) = e-101
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -1
Query: 104 PSHHARCRRALEGTRLSLHCLYMP 33
PS HAR RR G RLS HCL P
Sbjct: 148 PSQHARRRRTPGGRRLSSHCLCTP 77
Score = 35.0 bits (70), Expect(3) = 5e-085
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1 / +3
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGK 108
+ ++G++RQC+ESL+P L RA EG+
Sbjct: 66 TNKNGVHRQCDESLLPPGVRLRRACWEGR 152
Score = 30.4 bits (60), Expect(4) = 2e-024
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +2
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 176 KRRPGLAGRSTSASWAP 226
Score = 29.5 bits (58), Expect(4) = 2e-024
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3 / +2
Query: 30 RWHV*TMQ*EPCSF*RSSAPCMVRRQSQRTTIQKRPGP 143
+W M+*EP S RSSAP M+ R T ++ P
Sbjct: 74 KWRAQAMR*EPSSSWRSSAPRMLGRTLLPRTAMRKRRP 187
Score = 23.5 bits (45), Expect(3) = 1e-047
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1 / -2
Query: 661 VGAVPGRRHIDVLDQ 617
VGAVPGRR + +Q
Sbjct: 705 VGAVPGRRDRHIFNQ 661
>gb|CF480173.1|CF480173 POL1_64_D11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_D11_A002 3', mRNA sequence
Length = 637
Score = 398 bits (864), Expect(2) = e-110
Identities = 161/185 (87%), Positives = 175/185 (94%)
Frame = +2 / +2
Query: 725 GDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRI 904
GDDCISIGPGT+KVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT+NG+RI
Sbjct: 2 GDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRI 181
Query: 905 KAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNIT 1084
KAYEDAASVLTASKIHYENIKMEDS PIIIDMKYCPNK+CTA+GASKVTVKDV+FKN+T
Sbjct: 182 KAYEDAASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVT 361
Query: 1085 GTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELACF* 1264
GTS++PEAV+LLCS KIPCTGVTMD+V ++YSG NNKTMAVC+NAKGSA GCLKELACF*
Sbjct: 362 GTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF* 541
Query: 1265 NHHRP 1279
P
Sbjct: 542 TSIHP 556
Score = 319 bits (692), Expect = 5e-086
Identities = 146/180 (81%), Positives = 153/180 (85%)
Frame = -2 / -2
Query: 1263 *KHASSLRQPLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVP 1084
*KHASSLRQP+ALPLAF HTA LT SMVTPV GIL+EQSRLTASG+ EVP
Sbjct: 540 *KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVP 361
Query: 1083 VMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYAL 904
V FLK TSLTVTLEAPLAV LLGQYFMSM+MG ESSIL+FS*WILEAVSTEAASSYAL
Sbjct: 360 VTFLKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYAL 181
Query: 903 MRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSP 724
+R PL VF SVQS TL+SVTSFSSLYRPRLPMLMPWPGP VTPVMFTL VPGPMEMQSSP
Sbjct: 180 IRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQSSP 1
Score = 134 bits (287), Expect(3) = 4e-043
Identities = 56/71 (78%), Positives = 62/71 (87%)
Frame = +1 / +1
Query: 823 AVQGREGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL*EYQDGGLGLPHHHRH 1002
AVQGREGRHG+QR+GL+A ED QR P QGV GRRLRAHRLQDPL*E+QDGGL PH+HRH
Sbjct: 100 AVQGREGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRH 279
Query: 1003 EVLPQQVMHRQ 1035
EVLP Q +HRQ
Sbjct: 280 EVLP*QNLHRQ 312
Score = 69.8 bits (146), Expect(2) = 3e-023
Identities = 38/69 (55%), Positives = 38/69 (55%)
Frame = -3 / -3
Query: 1028 CITCWGSTSCR**WGXXXXXXXXXXXXSWXXXXXXXRPHTP*CGRRWPSS*ACSP*R*YP 849
C C GSTSCR**WG SW RP TP* G R SS A SP R* P
Sbjct: 305 CRFC*GSTSCR**WGSTSPPS*CSHSGSWRR*ARRRRPRTP*SGGRCSSSSAYSPSR*CP 126
Query: 848 *RPSRPCTA 822
*RPSRPCTA
Sbjct: 125 *RPSRPCTA 99
Score = 69.3 bits (145), Expect(3) = 4e-021
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = -1 / -1
Query: 1018 VGAVLHVDDDGVARVLHLDILIVDLXXXXXXXGVLIRLDADAVGRLLK 875
V AVLHVDD+GV RVLHLD+LIVDL GVL+RLD +AV RLL+
Sbjct: 295 VRAVLHVDDNGVRRVLHLDVLIVDLGGGEHGGGVLVRLDPEAVARLLQ 152
Score = 61.1 bits (127), Expect(2) = 3e-023
Identities = 29/50 (58%), Positives = 30/50 (60%)
Frame = -1 / -1
Query: 1264 LEACELLEATLGAALSVLAYGHXXXXXXXXXXXXXVHGDAGAWDLGRAEQ 1115
LEACELLEA GAAL VLAYGH +HGDA A DL AEQ
Sbjct: 541 LEACELLEAACGAALGVLAYGHGLVVFATVLDLDVIHGDASAGDLVGAEQ 392
Score = 52.4 bits (108), Expect(3) = 4e-043
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3 / +3
Query: 1194 RPWPYARTLRAAPRVASRSSHASR 1265
RPWPYA+T RAAP+ ASRSSHASR
Sbjct: 471 RPWPYAKTPRAAPQAASRSSHASR 542
Score = 47.8 bits (98), Expect(3) = 4e-021
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -3 / -3
Query: 1265 SRSMRAP*GNPWRCP*RSCIRPWS 1194
SRSMRAP*G+ WRCP R IRPWS
Sbjct: 542 SRSMRAP*GSLWRCPWRFGIRPWS 471
Score = 29.0 bits (57), Expect(3) = 4e-043
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1 / +1
Query: 1099 PGGRQPALLCQDPM 1140
P GRQPALL QDP+
Sbjct: 376 PRGRQPALLRQDPL 417
Score = 24.0 bits (46), Expect(3) = 4e-021
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 1163 RRPW*RRCMGS 1131
R PW*R+C GS
Sbjct: 440 RYPW*RQCRGS 408
Score = 22.6 bits (43), Expect(2) = e-110
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1 / +3
Query: 1267 PPSTHLSSYTMCLVV 1311
PPSTHL+ Y + +V
Sbjct: 543 PPSTHLALYLVISLV 587
>gb|CW463315.1|CW463315 fsbb001f211n16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f211n16, DNA
sequence
Length = 695
Score = 211 bits (456), Expect(3) = e-109
Identities = 82/91 (90%), Positives = 89/91 (97%)
Frame = +2 / +1
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 421 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 600
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSP 658
L+N+KFFHMN+++CKDMLIKDV VTAPGDSP
Sbjct: 601 LVNAKFFHMNVFQCKDMLIKDVTVTAPGDSP 693
Score = 190 bits (410), Expect(3) = e-101
Identities = 76/83 (91%), Positives = 77/83 (92%)
Frame = -2 / -1
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAFV
Sbjct: 419 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFV 240
Query: 198 LSVLPLPEAPNLVMSKDPPGPDA 130
LS LP PEAPNL+MS DPPGPDA
Sbjct: 239 LSFLPSPEAPNLLMSNDPPGPDA 171
Score = 187 bits (402), Expect(3) = e-109
Identities = 75/81 (92%), Positives = 79/81 (97%)
Frame = +2 / +1
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVGPLNFTGPCK
Sbjct: 178 GPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCK 357
Query: 317 GDVTIQVNGNLLATTDLSQYK 379
GDVTIQV+GNLLATTDLSQYK
Sbjct: 358 GDVTIQVDGNLLATTDLSQYK 420
Score = 184 bits (396), Expect(3) = e-101
Identities = 79/92 (85%), Positives = 83/92 (90%)
Frame = -2 / -1
Query: 660 LGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQ 481
LGLSPGAVT+TSLI+MSLH FMWKNL +SVIPDTSPLFT S TSELGRILQSYFL
Sbjct: 695 LGLSPGAVTVTSLINMSLHWNTFMWKNLAFTSVIPDTSPLFT*SSTSELGRILQSYFLAH 516
Query: 480 EFLLHTAGPCPSSFPLPVMTRLSTRRISIQLP 385
EFLLHTAGPCPSSFPLPV+TRLSTRRISIQLP
Sbjct: 515 EFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 420
Score = 166 bits (356), Expect(3) = 1e-085
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +3
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPM 312
VRA V+RH QVGRL + Q+G HEGCAGG+ +GVRRHREADDPHP GRLPRRTTQLHRP+
Sbjct: 174 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 353
Query: 313 QGRRDHPGEWQSAGDHGPKPVQG 381
QGRRDHPG QSAGDHGP+PVQG
Sbjct: 354 QGRRDHPGGRQSAGDHGPEPVQG 422
Score = 157 bits (338), Expect(3) = 1e-085
Identities = 69/91 (75%), Positives = 73/91 (80%)
Frame = +1 / +3
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 423 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 602
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQ 660
+ QVLPHE V VQGH D G GARGQPQ
Sbjct: 603 GKRQVLPHERVPVQGHVD*GCDGHGARGQPQ 695
Score = 116 bits (248), Expect(2) = 3e-050
Identities = 56/83 (67%), Positives = 57/83 (68%)
Frame = -1 / -3
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCPXXXXXXX 200
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 420 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHSLR 241
Query: 199 XXXXXXXXXAQLGDVEGPTGPGR 131
AQL DVE P PGR
Sbjct: 240 AVLLAVAGGAQLADVERPARPGR 172
Score = 105 bits (223), Expect(2) = 3e-050
Identities = 47/94 (50%), Positives = 55/94 (58%)
Frame = -1 / -3
Query: 658 GAVPGRRHIDVLDQXXXXXXXXXXXXXXXEQRDPGHLPVVHEVHHQRVGKXXXXXXXXXX 479
GAVPGRR +L+Q QRDPGHLPVVH V HQRVG+
Sbjct: 693 GAVPGRRDRHILNQHVLALEHVHVEELGVYQRDPGHLPVVHVVQHQRVGQDLAVVLLGAR 514
Query: 478 XXAPHGWPLPVELSLAGDDKVVHA*NLDPITMIL 377
APHG LPVEL LAGD +VVH +LDP+T++L
Sbjct: 513 VLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 412
Score = 68.9 bits (144), Expect(4) = 2e-024
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +2
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 422 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 550
Score = 68.4 bits (143), Expect(2) = 2e-023
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / -2
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRRTP PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 283 CRRTPTSMPPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 164
Score = 63.4 bits (132), Expect(2) = 2e-023
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -2
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 421 PCTGSGPWSPADCRPPGWSRRPC 353
Score = 47.8 bits (98), Expect(4) = 2e-024
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +2
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 356 RAT*PSRWTAICWRPRT*ASTRV 424
Score = 39.1 bits (79), Expect(3) = e-109
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +1
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 64 KMACTGNAMRAFFLLAFVCAAH 129
Score = 35.4 bits (71), Expect(3) = e-101
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -2
Query: 104 PSHHARCRRALEGTRLSLHCLYMP 33
PS HAR RR G RLS HCL P
Sbjct: 139 PSQHARRRRTPGGRRLSSHCLCTP 68
Score = 35.0 bits (70), Expect(3) = 1e-085
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1 / +3
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGK 108
+ ++G++RQC+ESL+P L RA EG+
Sbjct: 57 TNKNGVHRQCDESLLPPGVRLRRACWEGR 143
Score = 30.4 bits (60), Expect(4) = 2e-024
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +2
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 167 KRRPGLAGRSTSASWAP 217
Score = 29.5 bits (58), Expect(4) = 2e-024
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3 / +2
Query: 30 RWHV*TMQ*EPCSF*RSSAPCMVRRQSQRTTIQKRPGP 143
+W M+*EP S RSSAP M+ R T ++ P
Sbjct: 65 KWRAQAMR*EPSSSWRSSAPRMLGRTLLPRTAMRKRRP 178
>gb|BG322873.1|BG322873 EM1_15_B11.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 580
Score = 396 bits (860), Expect = e-109
Identities = 157/190 (82%), Positives = 175/190 (92%)
Frame = +2 / +1
Query: 623 KDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHG 802
KDV VTAPGDSPNTDGIH+GDSS VTIT T IGVGDDCISIGPG++ +N+TGVTCGPGHG
Sbjct: 10 KDVTVTAPGDSPNTDGIHIGDSSKVTITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHG 189
Query: 803 ISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSG 982
IS+GSLGRYKDEKDVTDINVKDCTLKKT+NGVRIK+YEDAA V+TASK+HYENI M+D
Sbjct: 190 ISVGSLGRYKDEKDVTDINVKDCTLKKTSNGVRIKSYEDAACVITASKLHYENIAMDDVA 369
Query: 983 YPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDD 1162
PIIIDMKYCPNK+CTA G SKVTVKDVTFKNITGTSSTPEAV+LLCS KIPC+GVTMD+
Sbjct: 370 NPIIIDMKYCPNKICTAKGDSKVTVKDVTFKNITGTSSTPEAVSLLCSDKIPCSGVTMDN 549
Query: 1163 VNIKYSGTNN 1192
+ ++Y GTNN
Sbjct: 550 IKVEYKGTNN 579
Score = 320 bits (694), Expect = 3e-086
Identities = 144/179 (80%), Positives = 155/179 (86%)
Frame = -2 / -3
Query: 1158 SMVTPVHGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*P 979
SMVTP+ GIL+EQSRLTASGV+EVPVMFL VTSLTVTLE+PLAV LLGQYFMSMMMG
Sbjct: 545 SMVTPLQGILSEQSRLTASGVDEVPVMFLNVTSLTVTLESPLAVQILLGQYFMSMMMGLA 366
Query: 978 ESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMP 799
SS+ +FS*W LEAV T AASS L+RTPL VFLSVQSLTL+SVTSFSSLY PRLP LMP
Sbjct: 365 TSSMAMFS*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMP 186
Query: 798 WPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSL 622
WPGPQVTPV +PGPMEMQSSPTPM V VMVT +ESPMWMPSVLGLSPGAVT+TSL
Sbjct: 185 WPGPQVTPVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMPSVLGLSPGAVTVTSL 9
Score = 100 bits (214), Expect(4) = 9e-030
Identities = 45/70 (64%), Positives = 50/70 (71%)
Frame = +1 / +3
Query: 826 VQGREGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL*EYQDGGLGLPHHHRHE 1005
VQG EG G+QRQGLHA ED Q RP Q + GRR+R H LQ PL E+ G G PHHHRHE
Sbjct: 213 VQG*EGCDGHQRQGLHAQEDQQWRPDQVLRGRRVRDHCLQAPLREHSHGRRGQPHHHRHE 392
Query: 1006 VLPQQVMHRQ 1035
VLPQQ +H Q
Sbjct: 393 VLPQQDLHCQ 422
Score = 34.1 bits (68), Expect(4) = 9e-030
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +1 / +3
Query: 622 QGRQCDGARGQPQHGRHP 675
QGR ARGQPQH RHP
Sbjct: 9 QGRDRHRARGQPQHRRHP 62
Score = 30.4 bits (60), Expect(4) = 9e-030
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1 / +3
Query: 1099 PGGRQPALLCQDPM 1140
PGGRQPALL Q+P+
Sbjct: 486 PGGRQPALLRQNPL 527
Score = 22.6 bits (43), Expect(4) = 9e-030
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / +1
Query: 755 TSKVNITGVTCGPG 796
+SKV ITG T G G
Sbjct: 73 SSKVTITGTTIGVG 114
>gb|CF488665.1|CF488665 POL1_51_A10.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_51_A10_A002 5', mRNA sequence
Length = 651
Score = 246 bits (532), Expect(4) = e-109
Identities = 97/105 (92%), Positives = 102/105 (97%)
Frame = +2 / +2
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 335 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 514
Query: 566 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVT 700
LLN+KFFHMN++ CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVT
Sbjct: 515 LLNAKFFHMNVFXCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVT 649
Score = 217 bits (469), Expect(4) = e-101
Identities = 93/106 (87%), Positives = 96/106 (90%)
Frame = -2 / -1
Query: 702 MVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVIPDTSPLFTKSIT 523
MVTPDESPMWMPSVLGLSPGAVT+TSLI+MSL FMWKNL SSVIPDTSPLFT S T
Sbjct: 651 MVTPDESPMWMPSVLGLSPGAVTVTSLINMSLXWNTFMWKNLAFSSVIPDTSPLFT*SST 472
Query: 522 SELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTRRISIQLP 385
SELGRILQSYFL EFLLHTAGPCPSSFPLPV+TRLSTRRISIQLP
Sbjct: 471 SELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 334
Score = 172 bits (371), Expect(4) = 5e-080
Identities = 74/96 (77%), Positives = 78/96 (81%)
Frame = +1 / +1
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 337 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 516
Query: 568 AQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
A+ QVLPHE V QGH D G GARGQPQHGRHP
Sbjct: 517 AKRQVLPHERVPXQGHVD*GCDGHGARGQPQHGRHP 624
Score = 116 bits (249), Expect(4) = e-101
Identities = 46/52 (88%), Positives = 47/52 (90%)
Frame = -2 / -2
Query: 285 TRKSPLGMRIVCFPVPPHADAHASCTAFVLSVLPLPEAPNLVMSKDPPGPDA 130
TR SPLGMRIVCFPVPPHAD HASCTAFVLS LP PEAPNL+MS DPPGPDA
Sbjct: 239 TR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLMSNDPPGPDA 84
Score = 113 bits (242), Expect(4) = e-109
Identities = 47/61 (77%), Positives = 51/61 (83%)
Frame = +2 / +1
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LV P +
Sbjct: 91 GPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVCISQLHRPVQ 270
Query: 317 G 319
G
Sbjct: 271 G 273
Score = 94.1 bits (199), Expect(4) = 5e-080
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = +1 / +3
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPR 285
VRA V+RH QVGRL + Q+G HEGCAGG+ +GVRRHREADDPHP GRLPR
Sbjct: 87 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPR 239
Score = 91.3 bits (193), Expect(4) = 2e-053
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / -3
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 517 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 338
Query: 388 TMIL 377
T++L
Sbjct: 337 TLVL 326
Score = 70.7 bits (148), Expect(4) = e-109
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +2 / +2
Query: 293 LNFTGPCKGDVTIQVNGNLLATTDLSQYK 379
LNFTGPCKGDVTIQV+GNLLATTDLSQYK
Sbjct: 248 LNFTGPCKGDVTIQVDGNLLATTDLSQYK 334
Score = 68.9 bits (144), Expect(4) = 5e-025
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +3
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 336 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 464
Score = 68.9 bits (144), Expect(4) = e-101
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = -2 / -1
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKL 295
LYWLRSVVASRLP TWMVTSPLHGPVKL
Sbjct: 333 LYWLRSVVASRLPSTWMVTSPLHGPVKL 250
Score = 68.9 bits (144), Expect(4) = 5e-080
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +1 / +1
Query: 265 PQGRLPRRTTQLHRPMQGRRDHPGEWQSAGDHGPKPVQG 381
P+G +QLHRP+QGRRDHPG QSAGDHGP+PVQG
Sbjct: 220 PKGDYLVCISQLHRPVQGRRDHPGGRQSAGDHGPEPVQG 336
Score = 68.4 bits (143), Expect(4) = 2e-053
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / -3
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRRTP PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 196 CRRTPTSMPPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 77
Score = 63.4 bits (132), Expect(4) = 2e-053
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -2
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 335 PCTGSGPWSPADCRPPGWSRRPC 267
Score = 47.8 bits (98), Expect(4) = 5e-025
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +3
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 270 RAT*PSRWTAICWRPRT*ASTRV 338
Score = 45.5 bits (93), Expect(4) = 2e-053
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / -3
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 637 RVAHVDAVRVGAVPGRRDRHILNQ 566
Score = 30.9 bits (61), Expect(4) = 5e-025
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 648 GTAPTRTASTW 680
GTAPTRTASTW
Sbjct: 597 GTAPTRTASTW 629
Score = 30.4 bits (60), Expect(4) = 5e-025
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +2
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 80 KRRPGLAGRSTSASWAP 130
Score = 24.9 bits (48), Expect(4) = e-101
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3 / -3
Query: 104 PSHHARCRRALEGTRLS 54
PS HAR RR G RLS
Sbjct: 52 PSQHARRRRTPGGRRLS 2
Score = 24.9 bits (48), Expect(4) = e-109
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2 / +1
Query: 53 MRALFLLALFCTVH 94
MRA FLLA C H
Sbjct: 1 MRAFFLLAFVCAAH 42
Score = 22.6 bits (43), Expect(4) = 5e-080
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3 / +2
Query: 54 *EPCSF*RSSAPCMVRRQSQRTTIQKRPGP 143
*EP S RSSAP M+ R T ++ P
Sbjct: 2 *EPSSSWRSSAPRMLGRTLLPRTAMRKRRP 91
>gb|BZ423602.1|BZ423602 id51c01.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id51c01 5', DNA sequence
Length = 574
Score = 396 bits (858), Expect = e-109
Identities = 158/191 (82%), Positives = 174/191 (91%)
Frame = +2 / +1
Query: 530 DFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITN 709
DF NN VSGITLLNSKFFHMN+++CK + IKDV VTAPGDSPNTDGIH+GDSS VTIT
Sbjct: 1 DFCNNATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKVTITG 180
Query: 710 TVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTA 889
T IGVGDDCISIGPG++ +N+TGVTCGPGHGIS+GSLGRYKDEKDVTDINVKDCTLKKT+
Sbjct: 181 TTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTLKKTS 360
Query: 890 NGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVT 1069
NGVRIK+YEDAA V+TASK+HYENI M+D PIIIDMKYCPNK+CTA G SKVTVKDVT
Sbjct: 361 NGVRIKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKICTAKGDSKVTVKDVT 540
Query: 1070 FKNITGTSSTP 1102
FKNITGTSSTP
Sbjct: 541 FKNITGTSSTP 573
Score = 321 bits (696), Expect = 1e-086
Identities = 145/190 (76%), Positives = 155/190 (81%)
Frame = -2 / -3
Query: 1101 GVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEA 922
GV+EVPVMFL VTSLTVTLE+PLAV LLGQYFMSMMMG SS+ +FS*W LEAV T A
Sbjct: 572 GVDEVPVMFLNVTSLTVTLESPLAVQILLGQYFMSMMMGLATSSMAMFS*WSLEAVITHA 393
Query: 921 ASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPM 742
ASS L+RTPL VFLSVQSLTL+SVTSFSSLY PRLP LMPWPGPQVTPV +PGPM
Sbjct: 392 ASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQVTPVTLIPVLPGPM 213
Query: 741 EMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSV 562
EMQSSPTPM V VMVT +ESPMWMPSVLGLSPGAVT+TSLI LH FMWKNLE S V
Sbjct: 212 EMQSSPTPMVVPVMVTLEESPMWMPSVLGLSPGAVTVTSLIVTPLHWNTFMWKNLEFSRV 33
Query: 561 IPDTSPLFTK 532
IP+T L K
Sbjct: 32 IPETVALLQK 3
Score = 100 bits (214), Expect(3) = 2e-037
Identities = 45/70 (64%), Positives = 50/70 (71%)
Frame = +1 / +3
Query: 826 VQGREGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL*EYQDGGLGLPHHHRHE 1005
VQG EG G+QRQGLHA ED Q RP Q + GRR+R H LQ PL E+ G G PHHHRHE
Sbjct: 297 VQG*EGCDGHQRQGLHAQEDQQWRPDQVLRGRRVRDHCLQAPLREHSHGRRGQPHHHRHE 476
Query: 1006 VLPQQVMHRQ 1035
VLPQQ +H Q
Sbjct: 477 VLPQQDLHCQ 506
Score = 73.5 bits (154), Expect(3) = 2e-037
Identities = 31/48 (64%), Positives = 34/48 (70%)
Frame = +1 / +3
Query: 532 LREQRGGVRDHAAQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
L +QR +RDH A+LQVLPHE V VQ DQGR ARGQPQH RHP
Sbjct: 3 LLQQRHRLRDHPAELQVLPHERVPVQRRDDQGRDRHRARGQPQHRRHP 146
Score = 22.6 bits (43), Expect(3) = 2e-037
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / +1
Query: 755 TSKVNITGVTCGPG 796
+SKV ITG T G G
Sbjct: 157 SSKVTITGTTIGVG 198
>gb|CF485801.1|CF485801 POL1_33_F06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F06_A002 5', mRNA sequence
Length = 663
Score = 338 bits (733), Expect(3) = e-108
Identities = 136/147 (92%), Positives = 143/147 (97%)
Frame = +2 / +3
Query: 590 MNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVN 769
MN+++CKDMLIKDV VTAPGDSPNTDGIHMGDSSGVTI NTVIGVGDDCISIGPGT+KVN
Sbjct: 222 MNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVN 401
Query: 770 ITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASKI 949
ITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT+NG+RIKAYEDAASVLTASKI
Sbjct: 402 ITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKI 581
Query: 950 HYENIKMEDSGYPIIIDMKYCPNKLCT 1030
HYENIKMEDS PIIIDMKYCPNK+CT
Sbjct: 582 HYENIKMEDSSNPIIIDMKYCPNKICT 662
Score = 290 bits (628), Expect(3) = 4e-095
Identities = 126/147 (85%), Positives = 132/147 (89%)
Frame = -2 / -3
Query: 1029 VHNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLIS 850
V LLGQYFMSM+MG ESSIL+FS*WILEAVSTEAASSYAL+R PL VF SVQS TL+S
Sbjct: 661 VQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMS 482
Query: 849 VTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWM 670
VTSFSSLYRPRLPMLMPWPGP VTPVMFTL VPGPMEMQSSPTPMTV MVTPDESPMWM
Sbjct: 481 VTSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWM 302
Query: 669 PSVLGLSPGAVTLTSLISMSLHLYMFM 589
PSVLGLSPGAVT+TSLI+MSLH FM
Sbjct: 301 PSVLGLSPGAVTVTSLINMSLHWNTFM 221
Score = 129 bits (277), Expect(4) = 2e-051
Identities = 54/69 (78%), Positives = 60/69 (86%)
Frame = +1 / +2
Query: 823 AVQGREGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL*EYQDGGLGLPHHHRH 1002
AVQGREGRHG+QR+GL+A ED QR P QGV GRRLRAHRLQDPL*E+QDGGL PH+HRH
Sbjct: 455 AVQGREGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRH 634
Query: 1003 EVLPQQVMH 1029
EVLP Q +H
Sbjct: 635 EVLP*QNLH 661
Score = 69.8 bits (146), Expect(3) = 4e-095
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = -2 / -2
Query: 222 HASCTAFVLSVLPLPEAPNLVMSKDPPGPDA 130
HASCTAFVLS LP PEAPNL+MS DPPGPDA
Sbjct: 224 HASCTAFVLSFLPSPEAPNLLMSNDPPGPDA 132
Score = 69.8 bits (146), Expect(3) = 3e-028
Identities = 38/69 (55%), Positives = 38/69 (55%)
Frame = -3 / -1
Query: 1028 CITCWGSTSCR**WGXXXXXXXXXXXXSWXXXXXXXRPHTP*CGRRWPSS*ACSP*R*YP 849
C C GSTSCR**WG SW RP TP* G R SS A SP R* P
Sbjct: 660 CRFC*GSTSCR**WGSTSPPS*CSHSGSWRR*ARRRRPRTP*SGGRCSSSSAYSPSR*CP 481
Query: 848 *RPSRPCTA 822
*RPSRPCTA
Sbjct: 480 *RPSRPCTA 454
Score = 61.6 bits (128), Expect(3) = e-108
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +2 / +1
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEA 220
GPGGSFDI+KLGASG+GK DSTKAVQEA
Sbjct: 139 GPGGSFDISKLGASGDGKKDSTKAVQEA 222
Score = 55.6 bits (115), Expect(3) = 3e-028
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = -3 / -3
Query: 218 PPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 220 PPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 125
Score = 54.2 bits (112), Expect(4) = 2e-051
Identities = 21/29 (72%), Positives = 21/29 (72%)
Frame = +1 / +2
Query: 589 HEHVQVQGHADQGRQCDGARGQPQHGRHP 675
HE V VQGH D G GARGQPQHGRHP
Sbjct: 221 HERVPVQGHVD*GCDGHGARGQPQHGRHP 307
Score = 49.2 bits (101), Expect(4) = 2e-051
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = +1 / +3
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGI 228
VRA V+RH QVGRL + Q+G HEGCAGG+ +
Sbjct: 135 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMNV 230
Score = 45.5 bits (93), Expect(3) = 3e-028
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / -2
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 320 RVAHVDAVRVGAVPGRRDRHILNQ 249
Score = 39.1 bits (79), Expect(3) = e-108
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +1
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 25 KMACTGNAMRAFFLLAFVCAAH 90
Score = 35.4 bits (71), Expect(3) = 4e-095
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -3
Query: 104 PSHHARCRRALEGTRLSLHCLYMP 33
PS HAR RR G RLS HCL P
Sbjct: 100 PSQHARRRRTPGGRRLSSHCLCTP 29
Score = 35.0 bits (70), Expect(4) = 2e-051
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1 / +3
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGK 108
+ ++G++RQC+ESL+P L RA EG+
Sbjct: 18 TNKNGVHRQCDESLLPPGVRLRRACWEGR 104
>gb|CF487334.1|CF487334 POL1_43_D12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_D12_A002 3', mRNA sequence
Length = 637
Score = 386 bits (837), Expect(2) = e-106
Identities = 157/181 (86%), Positives = 171/181 (94%)
Frame = +2 / +1
Query: 737 ISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYE 916
ISIGPGT+KVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT+NG+RIKAYE
Sbjct: 1 ISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYE 180
Query: 917 DAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSS 1096
DAASVLTASKIHYENIKMEDS PIIIDMKYCPNK+CTA+GASKVTVKDV+FKN+TGTS+
Sbjct: 181 DAASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSA 360
Query: 1097 TPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELACF*NHHR 1276
+PEAV+LLCS KIPCTGVTMD+V ++YSG NNKTMAVC+NAKGSA GCLKELACF*
Sbjct: 361 SPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF*TSIH 540
Query: 1277 P 1279
P
Sbjct: 541 P 543
Score = 308 bits (667), Expect = 1e-082
Identities = 141/175 (80%), Positives = 148/175 (84%)
Frame = -2 / -3
Query: 1263 *KHASSLRQPLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVP 1084
*KHASSLRQP+ALPLAF HTA LT SMVTPV GIL+EQSRLTASG+ EVP
Sbjct: 527 *KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVP 348
Query: 1083 VMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYAL 904
V FLK TSLTVTLEAPLAV LLGQYFMSM+MG ESSIL+FS*WILEAVSTEAASSYAL
Sbjct: 347 VTFLKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYAL 168
Query: 903 MRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPME 739
+R PL VF SVQS TL+SVTSFSSLYRPRLPMLMPWPGP VTPVMFTL VPGPME
Sbjct: 167 IRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPME 3
Score = 134 bits (287), Expect(3) = 4e-043
Identities = 56/71 (78%), Positives = 62/71 (87%)
Frame = +1 / +3
Query: 823 AVQGREGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL*EYQDGGLGLPHHHRH 1002
AVQGREGRHG+QR+GL+A ED QR P QGV GRRLRAHRLQDPL*E+QDGGL PH+HRH
Sbjct: 87 AVQGREGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRH 266
Query: 1003 EVLPQQVMHRQ 1035
EVLP Q +HRQ
Sbjct: 267 EVLP*QNLHRQ 299
Score = 69.8 bits (146), Expect(2) = 3e-023
Identities = 38/69 (55%), Positives = 38/69 (55%)
Frame = -3 / -1
Query: 1028 CITCWGSTSCR**WGXXXXXXXXXXXXSWXXXXXXXRPHTP*CGRRWPSS*ACSP*R*YP 849
C C GSTSCR**WG SW RP TP* G R SS A SP R* P
Sbjct: 292 CRFC*GSTSCR**WGSTSPPS*CSHSGSWRR*ARRRRPRTP*SGGRCSSSSAYSPSR*CP 113
Query: 848 *RPSRPCTA 822
*RPSRPCTA
Sbjct: 112 *RPSRPCTA 86
Score = 69.3 bits (145), Expect(3) = 4e-021
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = -1 / -2
Query: 1018 VGAVLHVDDDGVARVLHLDILIVDLXXXXXXXGVLIRLDADAVGRLLK 875
V AVLHVDD+GV RVLHLD+LIVDL GVL+RLD +AV RLL+
Sbjct: 282 VRAVLHVDDNGVRRVLHLDVLIVDLGGGEHGGGVLVRLDPEAVARLLQ 139
Score = 61.1 bits (127), Expect(2) = 3e-023
Identities = 29/50 (58%), Positives = 30/50 (60%)
Frame = -1 / -2
Query: 1264 LEACELLEATLGAALSVLAYGHXXXXXXXXXXXXXVHGDAGAWDLGRAEQ 1115
LEACELLEA GAAL VLAYGH +HGDA A DL AEQ
Sbjct: 528 LEACELLEAACGAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAEQ 379
Score = 52.4 bits (108), Expect(3) = 4e-043
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3 / +2
Query: 1194 RPWPYARTLRAAPRVASRSSHASR 1265
RPWPYA+T RAAP+ ASRSSHASR
Sbjct: 458 RPWPYAKTPRAAPQAASRSSHASR 529
Score = 47.8 bits (98), Expect(3) = 4e-021
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -3 / -1
Query: 1265 SRSMRAP*GNPWRCP*RSCIRPWS 1194
SRSMRAP*G+ WRCP R IRPWS
Sbjct: 529 SRSMRAP*GSLWRCPWRFGIRPWS 458
Score = 29.0 bits (57), Expect(3) = 4e-043
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1 / +3
Query: 1099 PGGRQPALLCQDPM 1140
P GRQPALL QDP+
Sbjct: 363 PRGRQPALLRQDPL 404
Score = 24.0 bits (46), Expect(3) = 4e-021
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 1163 RRPW*RRCMGS 1131
R PW*R+C GS
Sbjct: 427 RYPW*RQCRGS 395
Score = 22.6 bits (43), Expect(2) = e-106
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1 / +2
Query: 1267 PPSTHLSSYTMCLVV 1311
PPSTHL+ Y + +V
Sbjct: 530 PPSTHLALYLVISLV 574
>gb|CF489185.1|CF489185 POL1_55_F02.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_55_F02_A002 3', mRNA sequence
Length = 619
Score = 382 bits (829), Expect(2) = e-105
Identities = 155/179 (86%), Positives = 169/179 (94%)
Frame = +2 / +3
Query: 743 IGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDA 922
IGPGT+KVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT+NG+RIKAYEDA
Sbjct: 3 IGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDA 182
Query: 923 ASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTP 1102
ASVLTASKIHYENIKMEDS PIIIDMKYCPNK+CTA+GASKVTVKDV+FKN+TGTS++P
Sbjct: 183 ASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSASP 362
Query: 1103 EAVNLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELACF*NHHRP 1279
EAV+LLCS KIPCTGVTMD+V ++YSG NNKTMAVC+NAKGSA GCLKELACF* P
Sbjct: 363 EAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF*TSIHP 539
Score = 306 bits (662), Expect = 7e-082
Identities = 140/174 (80%), Positives = 147/174 (84%)
Frame = -2 / -1
Query: 1263 *KHASSLRQPLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVP 1084
*KHASSLRQP+ALPLAF HTA LT SMVTPV GIL+EQSRLTASG+ EVP
Sbjct: 523 *KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVP 344
Query: 1083 VMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYAL 904
V FLK TSLTVTLEAPLAV LLGQYFMSM+MG ESSIL+FS*WILEAVSTEAASSYAL
Sbjct: 343 VTFLKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYAL 164
Query: 903 MRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPM 742
+R PL VF SVQS TL+SVTSFSSLYRPRLPMLMPWPGP VTPVMFTL VPGPM
Sbjct: 163 IRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPM 2
Score = 134 bits (287), Expect(3) = 3e-042
Identities = 56/71 (78%), Positives = 62/71 (87%)
Frame = +1 / +2
Query: 823 AVQGREGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL*EYQDGGLGLPHHHRH 1002
AVQGREGRHG+QR+GL+A ED QR P QGV GRRLRAHRLQDPL*E+QDGGL PH+HRH
Sbjct: 83 AVQGREGRHGHQREGLYAKEDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRH 262
Query: 1003 EVLPQQVMHRQ 1035
EVLP Q +HRQ
Sbjct: 263 EVLP*QNLHRQ 295
Score = 69.8 bits (146), Expect(2) = 1e-022
Identities = 38/69 (55%), Positives = 38/69 (55%)
Frame = -3 / -2
Query: 1028 CITCWGSTSCR**WGXXXXXXXXXXXXSWXXXXXXXRPHTP*CGRRWPSS*ACSP*R*YP 849
C C GSTSCR**WG SW RP TP* G R SS A SP R* P
Sbjct: 288 CRFC*GSTSCR**WGSTSPPS*CSHSGSWRR*ARRRRPRTP*SGGRCSSSLAYSPSR*CP 109
Query: 848 *RPSRPCTA 822
*RPSRPCTA
Sbjct: 108 *RPSRPCTA 82
Score = 59.3 bits (123), Expect(2) = 1e-022
Identities = 28/50 (56%), Positives = 30/50 (60%)
Frame = -1 / -3
Query: 1264 LEACELLEATLGAALSVLAYGHXXXXXXXXXXXXXVHGDAGAWDLGRAEQ 1115
L+ACELLEA GAAL VLAYGH +HGDA A DL AEQ
Sbjct: 524 LKACELLEAACGAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAEQ 375
Score = 49.6 bits (102), Expect(3) = 3e-042
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +3 / +1
Query: 1194 RPWPYARTLRAAPRVASRSSHASR 1265
RPWPYA+T RAAP+ ASRSSHA R
Sbjct: 454 RPWPYAKTPRAAPQAASRSSHAFR 525
Score = 29.0 bits (57), Expect(3) = 3e-042
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1 / +2
Query: 1099 PGGRQPALLCQDPM 1140
P GRQPALL QDP+
Sbjct: 359 PRGRQPALLRQDPL 400
Score = 22.6 bits (43), Expect(2) = e-105
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 1267 PPSTHLSSYTMCLVV 1311
PPSTHL+ Y + +V
Sbjct: 526 PPSTHLALYLVISLV 570
>gb|CF486033.1|CF486033 POL1_35_F09.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_F09_A002 3', mRNA sequence
Length = 618
Score = 378 bits (819), Expect(2) = e-104
Identities = 153/177 (86%), Positives = 167/177 (94%)
Frame = +2 / +1
Query: 749 PGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAAS 928
PGT+KVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT+NG+RIKAYEDAAS
Sbjct: 1 PGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAAS 180
Query: 929 VLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEA 1108
VLTASKIHYENIKMEDS PIIIDMKYCPNK+CTA+GASKVTVKDV+FKN+TGTS++PEA
Sbjct: 181 VLTASKIHYENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSASPEA 360
Query: 1109 VNLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELACF*NHHRP 1279
V+LLCS KIPCTGVTMD+V ++YSG NNKTMAVC+NAKGSA GCLKELACF* P
Sbjct: 361 VSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF*TSIHP 531
Score = 297 bits (644), Expect = 2e-079
Identities = 137/171 (80%), Positives = 144/171 (84%)
Frame = -2 / -2
Query: 1263 *KHASSLRQPLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVP 1084
*KHASSLRQP+ALPLAF HTA LT SMVTPV GIL+EQSRLTASG+ EVP
Sbjct: 515 *KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVP 336
Query: 1083 VMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYAL 904
V FLK TSLTVTLEAPLAV LLGQYFMSM+MG ESSIL+FS*WILEAVSTEAASSYAL
Sbjct: 335 VTFLKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYAL 156
Query: 903 MRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVP 751
+R PL VF SVQS TL+SVTSFSSLYRPRLPMLMPWPGP VTPVMFTL VP
Sbjct: 155 IRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVP 3
Score = 134 bits (287), Expect(3) = 3e-042
Identities = 56/71 (78%), Positives = 62/71 (87%)
Frame = +1 / +3
Query: 823 AVQGREGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL*EYQDGGLGLPHHHRH 1002
AVQGREGRHG+QR+GL+A ED QR P QGV GRRLRAHRLQDPL*E+QDGGL PH+HRH
Sbjct: 75 AVQGREGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRH 254
Query: 1003 EVLPQQVMHRQ 1035
EVLP Q +HRQ
Sbjct: 255 EVLP*QNLHRQ 287
Score = 69.8 bits (146), Expect(2) = 4e-022
Identities = 38/69 (55%), Positives = 38/69 (55%)
Frame = -3 / -3
Query: 1028 CITCWGSTSCR**WGXXXXXXXXXXXXSWXXXXXXXRPHTP*CGRRWPSS*ACSP*R*YP 849
C C GSTSCR**WG SW RP TP* G R SS A SP R* P
Sbjct: 280 CRFC*GSTSCR**WGSTSPPS*CSHSGSWRR*ARRRRPRTP*SGGRCSSSSAYSPSR*CP 101
Query: 848 *RPSRPCTA 822
*RPSRPCTA
Sbjct: 100 *RPSRPCTA 74
Score = 57.4 bits (119), Expect(2) = 4e-022
Identities = 27/50 (54%), Positives = 30/50 (60%)
Frame = -1 / -1
Query: 1264 LEACELLEATLGAALSVLAYGHXXXXXXXXXXXXXVHGDAGAWDLGRAEQ 1115
L+ACELLEA GAAL VLAYGH +HGDA A DL A+Q
Sbjct: 516 LKACELLEAACGAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAKQ 367
Score = 49.6 bits (102), Expect(3) = 3e-042
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +3 / +2
Query: 1194 RPWPYARTLRAAPRVASRSSHASR 1265
RPWPYA+T RAAP+ ASRSSHA R
Sbjct: 446 RPWPYAKTPRAAPQAASRSSHAFR 517
Score = 29.0 bits (57), Expect(3) = 3e-042
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1 / +3
Query: 1099 PGGRQPALLCQDPM 1140
P GRQPALL QDP+
Sbjct: 351 PRGRQPALLRQDPL 392
Score = 22.6 bits (43), Expect(2) = e-104
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1 / +2
Query: 1267 PPSTHLSSYTMCLVV 1311
PPSTHL+ Y + +V
Sbjct: 518 PPSTHLALYLVISLV 562
>gb|CF486111.1|CF486111 POL1_35_F09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_F09_A002 5', mRNA sequence
Length = 645
Score = 190 bits (410), Expect(3) = 7e-090
Identities = 76/83 (91%), Positives = 77/83 (92%)
Frame = -2 / -1
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAFV
Sbjct: 378 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFV 199
Query: 198 LSVLPLPEAPNLVMSKDPPGPDA 130
LS LP PEAPNL+MS DPPGPDA
Sbjct: 198 LSFLPSPEAPNLLMSNDPPGPDA 130
Score = 187 bits (402), Expect(4) = e-102
Identities = 75/81 (92%), Positives = 79/81 (97%)
Frame = +2 / +2
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVGPLNFTGPCK
Sbjct: 137 GPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCK 316
Query: 317 GDVTIQVNGNLLATTDLSQYK 379
GDVTIQV+GNLLATTDLSQYK
Sbjct: 317 GDVTIQVDGNLLATTDLSQYK 379
Score = 166 bits (357), Expect(4) = e-102
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2 / +2
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 380 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCTKKYDCKILPNSLVLDYVNNGEVSGIT 559
Query: 566 LLNSKFFHM 592
LLN+KFFHM
Sbjct: 560 LLNAKFFHM 586
Score = 166 bits (356), Expect(4) = 1e-077
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +1
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPM 312
VRA V+RH QVGRL + Q+G HEGCAGG+ +GVRRHREADDPHP GRLPRRTTQLHRP+
Sbjct: 133 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 312
Query: 313 QGRRDHPGEWQSAGDHGPKPVQG 381
QGRRDHPG QSAGDHGP+PVQG
Sbjct: 313 QGRRDHPGGRQSAGDHGPEPVQG 381
Score = 146 bits (314), Expect(3) = 7e-090
Identities = 62/69 (89%), Positives = 63/69 (91%)
Frame = -2 / -1
Query: 591 MWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLS 412
MWKNL SSVIPDTSPLFT S TSELGRILQSYFL EFLLHTAGPCPSSFPLPV+TRLS
Sbjct: 585 MWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLVHEFLLHTAGPCPSSFPLPVITRLS 406
Query: 411 TRRISIQLP 385
TRRISIQLP
Sbjct: 405 TRRISIQLP 379
Score = 125 bits (267), Expect(4) = 1e-077
Identities = 54/68 (79%), Positives = 58/68 (85%)
Frame = +1 / +1
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+ QEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 382 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVHQEVRLQDPAQLAGAGLREQRGGVRDHA 561
Query: 568 AQLQVLPH 591
A+ QVLPH
Sbjct: 562 AKRQVLPH 585
Score = 116 bits (248), Expect(2) = 4e-046
Identities = 56/83 (67%), Positives = 57/83 (68%)
Frame = -1 / -3
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCPXXXXXXX 200
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 379 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHSLR 200
Query: 199 XXXXXXXXXAQLGDVEGPTGPGR 131
AQL DVE P PGR
Sbjct: 199 AVLLAVAGGAQLADVERPARPGR 131
Score = 91.3 bits (193), Expect(2) = 4e-046
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / -3
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 562 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 383
Query: 388 TMIL 377
T++L
Sbjct: 382 TLVL 371
Score = 68.9 bits (144), Expect(4) = 1e-024
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +3
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 381 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 509
Score = 68.4 bits (143), Expect(3) = 1e-029
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / -2
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRRTP PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 242 CRRTPTSMPPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 123
Score = 63.4 bits (132), Expect(3) = 1e-029
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -2
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 380 PCTGSGPWSPADCRPPGWSRRPC 312
Score = 47.8 bits (98), Expect(4) = 1e-024
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +3
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 315 RAT*PSRWTAICWRPRT*ASTRV 383
Score = 41.8 bits (85), Expect(4) = e-102
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +2 / +3
Query: 593 NMYKCKDMLIKDVNVTAPG 649
N+++CKDMLIKDV VTAPG
Sbjct: 588 NVFQCKDMLIKDVTVTAPG 644
Score = 39.1 bits (79), Expect(4) = e-102
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +2
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 23 KMACTGNAMRAFFLLAFVCAAH 88
Score = 38.6 bits (78), Expect(3) = 1e-029
Identities = 25/72 (34%), Positives = 32/72 (44%)
Frame = -2 / -3
Query: 648 PGAVTLTSLISMSLHLYMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLL 469
PGAVT+TSLI+MSLH F + L + P P+ +G+ L L L
Sbjct: 643 PGAVTVTSLINMSLHWNTFHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLA 464
Query: 468 HTAGPCPSSFPL 433
G P PL
Sbjct: 463 PHGGALPVELPL 428
Score = 35.4 bits (71), Expect(3) = 7e-090
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -2
Query: 104 PSHHARCRRALEGTRLSLHCLYMP 33
PS HAR RR G RLS HCL P
Sbjct: 98 PSQHARRRRTPGGRRLSSHCLCTP 27
Score = 35.0 bits (70), Expect(4) = 1e-077
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1 / +1
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGK 108
+ ++G++RQC+ESL+P L RA EG+
Sbjct: 16 TNKNGVHRQCDESLLPPGVRLRRACWEGR 102
Score = 30.4 bits (60), Expect(4) = 1e-024
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +3
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 126 KRRPGLAGRSTSASWAP 176
Score = 29.5 bits (58), Expect(4) = 1e-024
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3 / +3
Query: 30 RWHV*TMQ*EPCSF*RSSAPCMVRRQSQRTTIQKRPGP 143
+W M+*EP S RSSAP M+ R T ++ P
Sbjct: 24 KWRAQAMR*EPSSSWRSSAPRMLGRTLLPRTAMRKRRP 137
Score = 24.4 bits (47), Expect(4) = 1e-077
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1 / +2
Query: 592 EHVQVQGHADQGRQCDGAR 648
E V VQGH D G GAR
Sbjct: 587 ERVPVQGHVD*GCDGHGAR 643
>gb|CL187602.1|CL187602 104_403_10901000_116_32464_026 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10901000, DNA
sequence
Length = 712
Score = 273 bits (590), Expect(2) = e-101
Identities = 107/164 (65%), Positives = 131/164 (79%)
Frame = +2 / -3
Query: 536 VNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTV 715
V NG VSGI LLNSKFFH+N+ K++ +KDVN+TAPGD NTDG+H+G S+ V+ITN+
Sbjct: 710 VTNGTVSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKVSITNST 531
Query: 716 IGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANG 895
IG GDDCIS+GPG+ V + + CGPG GISIG LGRYKDEKDVTD+ V+DC LKKT NG
Sbjct: 530 IGTGDDCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVLKKTTNG 351
Query: 896 VRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLC 1027
VRIK+YEDA SVLTAS + +ENI+ME+ PIIID +CP K+C
Sbjct: 350 VRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVC 219
Score = 213 bits (459), Expect(2) = 5e-070
Identities = 99/164 (60%), Positives = 112/164 (68%)
Frame = -2 / +1
Query: 1026 HNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISV 847
H GQ + SMMMG SSIL+FS +AVST++ASSY LMRTPL VFLS QS T+ SV
Sbjct: 220 HTFSGQKYWSMMMGFATSSILMFSKVRCDAVSTDSASSYDLMRTPLVVFLSTQSRTVTSV 399
Query: 846 TSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMP 667
TSFSSL RPR PMLMP PGPQ+ T +PGP EMQSSP PM LVM+T + P W P
Sbjct: 400 TSFSSL*RPRQPMLMPCPGPQMMLFTMTPSLPGPTEMQSSPVPMVELVMLTLVDIPTWTP 579
Query: 666 SVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVIPDTSPLFT 535
SV SPGAV TS M + MWKNLELSS+IP+T PL T
Sbjct: 580 SVFSTSPGAVMFTSFTVMFFEASILMWKNLELSSLIPETVPLVT 711
Score = 118 bits (253), Expect(2) = e-101
Identities = 46/66 (69%), Positives = 58/66 (87%)
Frame = +2 / -3
Query: 1040 ASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNA 1219
+S V VKDVTF+NITGTSSTP+A++LLCS PC+GV++ DVN++Y+G NNKTMAVC NA
Sbjct: 200 SSHVIVKDVTFRNITGTSSTPQAISLLCSQSQPCSGVSLIDVNVEYAGKNNKTMAVCSNA 21
Query: 1220 KGSAKG 1237
KG+AKG
Sbjct: 20 KGTAKG 3
Score = 74.4 bits (156), Expect(2) = 5e-070
Identities = 36/68 (52%), Positives = 41/68 (60%)
Frame = -2 / +1
Query: 1236 PLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVPVMFLKVTSL 1057
PLA+PLA LHTA TS TP+HG EQSRL A GV++VPVM VTSL
Sbjct: 4 PLAVPLALLHTAMVLLFLPAYSTFTSMSDTPLHGCDCEQSRLMACGVDDVPVMLRNVTSL 183
Query: 1056 TVTLEAPL 1033
T+T E L
Sbjct: 184 TMT*EESL 207
>gb|CF483650.1|CF483650 POL1_23_F06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_23_F06_A002 5', mRNA sequence
Length = 616
Score = 190 bits (410), Expect(3) = 1e-092
Identities = 76/83 (91%), Positives = 77/83 (92%)
Frame = -2 / -1
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAFV
Sbjct: 379 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFV 200
Query: 198 LSVLPLPEAPNLVMSKDPPGPDA 130
LS LP PEAPNL+MS DPPGPDA
Sbjct: 199 LSFLPSPEAPNLLMSNDPPGPDA 131
Score = 187 bits (402), Expect(3) = e-100
Identities = 75/81 (92%), Positives = 79/81 (97%)
Frame = +2 / +3
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVGPLNFTGPCK
Sbjct: 138 GPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCK 317
Query: 317 GDVTIQVNGNLLATTDLSQYK 379
GDVTIQV+GNLLATTDLSQYK
Sbjct: 318 GDVTIQVDGNLLATTDLSQYK 380
Score = 182 bits (393), Expect(3) = e-100
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +2 / +3
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVW KNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 381 GNWIEILRVDNLVITGKGKLDGQGPAVWGKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 560
Query: 566 LLNSKFFHMNMYKCKDML 619
LLN+KFFHMN+++CKDML
Sbjct: 561 LLNAKFFHMNVFQCKDML 614
Score = 166 bits (356), Expect(3) = 1e-080
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +2
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPM 312
VRA V+RH QVGRL + Q+G HEGCAGG+ +GVRRHREADDPHP GRLPRRTTQLHRP+
Sbjct: 134 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 313
Query: 313 QGRRDHPGEWQSAGDHGPKPVQG 381
QGRRDHPG QSAGDHGP+PVQG
Sbjct: 314 QGRRDHPGGRQSAGDHGPEPVQG 382
Score = 155 bits (334), Expect(3) = 1e-092
Identities = 67/79 (84%), Positives = 69/79 (87%)
Frame = -2 / -1
Query: 621 ISMSLHLYMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSS 442
I+MSLH FMWKNL SSVIPDTSPLFT S TSELGRILQSYFL EFL HTAGPCPSS
Sbjct: 616 INMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLPHTAGPCPSS 437
Query: 441 FPLPVMTRLSTRRISIQLP 385
FPLPV+TRLSTRRISIQLP
Sbjct: 436 FPLPVITRLSTRRISIQLP 380
Score = 141 bits (302), Expect(3) = 1e-080
Identities = 61/78 (78%), Positives = 65/78 (83%)
Frame = +1 / +2
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RV QEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 383 *LDRDPACGQPGDHRQGEARRAGPRRVGQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 562
Query: 568 AQLQVLPHEHVQVQGHAD 621
A+ QVLPHE V VQGH D
Sbjct: 563 AKRQVLPHERVPVQGHVD 616
Score = 116 bits (248), Expect(2) = 4e-046
Identities = 56/83 (67%), Positives = 57/83 (68%)
Frame = -1 / -3
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCPXXXXXXX 200
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 380 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHSLR 201
Query: 199 XXXXXXXXXAQLGDVEGPTGPGR 131
AQL DVE P PGR
Sbjct: 200 AVLLAVAGGAQLADVERPARPGR 132
Score = 91.3 bits (193), Expect(2) = 4e-046
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / -3
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 563 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 384
Query: 388 TMIL 377
T++L
Sbjct: 383 TLVL 372
Score = 68.9 bits (144), Expect(4) = 1e-024
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +1
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 382 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 510
Score = 68.4 bits (143), Expect(2) = 2e-023
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / -2
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRRTP PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 243 CRRTPTSMPPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 124
Score = 63.4 bits (132), Expect(2) = 2e-023
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -2
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 381 PCTGSGPWSPADCRPPGWSRRPC 313
Score = 47.8 bits (98), Expect(4) = 1e-024
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +1
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 316 RAT*PSRWTAICWRPRT*ASTRV 384
Score = 39.1 bits (79), Expect(3) = e-100
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +3
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 24 KMACTGNAMRAFFLLAFVCAAH 89
Score = 35.4 bits (71), Expect(3) = 1e-092
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -2
Query: 104 PSHHARCRRALEGTRLSLHCLYMP 33
PS HAR RR G RLS HCL P
Sbjct: 99 PSQHARRRRTPGGRRLSSHCLCTP 28
Score = 35.0 bits (70), Expect(3) = 1e-080
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1 / +2
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGK 108
+ ++G++RQC+ESL+P L RA EG+
Sbjct: 17 TNKNGVHRQCDESLLPPGVRLRRACWEGR 103
Score = 30.4 bits (60), Expect(4) = 1e-024
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 127 KRRPGLAGRSTSASWAP 177
Score = 29.5 bits (58), Expect(4) = 1e-024
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3 / +1
Query: 30 RWHV*TMQ*EPCSF*RSSAPCMVRRQSQRTTIQKRPGP 143
+W M+*EP S RSSAP M+ R T ++ P
Sbjct: 25 KWRAQAMR*EPSSSWRSSAPRMLGRTLLPRTAMRKRRP 138
>gb|CW160106.1|CW160106 104_566_11149707_148_36427_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149707, DNA
sequence
Length = 526
Score = 342 bits (742), Expect(2) = 2e-099
Identities = 139/150 (92%), Positives = 148/150 (98%)
Frame = +2 / -3
Query: 503 KILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMG 682
KILPNSLV+D+VNNGEVSGITLLN+KFFHMN+++CKDMLIKDV VTAPGDSPNTDGIHMG
Sbjct: 524 KILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMG 345
Query: 683 DSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINV 862
DSSGVTI NTVIGVGDDCISIGPGT+KVNITGVTCGPGHGISIGSLGRYKDEKDVTDINV
Sbjct: 344 DSSGVTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINV 165
Query: 863 KDCTLKKTANGVRIKAYEDAASVLTASKIH 952
KDCTLKKT+NG+RIKAYEDAASVLTASKIH
Sbjct: 164 KDCTLKKTSNGLRIKAYEDAASVLTASKIH 75
Score = 306 bits (662), Expect(2) = 5e-087
Identities = 132/151 (87%), Positives = 136/151 (90%)
Frame = -2 / +1
Query: 954 *WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTP 775
*WILEAVSTEAASSYAL+R PL VF SVQS TL+SVTSFSSLYRPRLPMLMPWPGP VTP
Sbjct: 73 *WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTP 252
Query: 774 VMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYM 595
VMFTL VPGPMEMQSSPTPMTV MVTPDESPMWMPSVLGLSPGAVT+TSLI+MSLH
Sbjct: 253 VMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNT 432
Query: 594 FMWKNLELSSVIPDTSPLFTKSITSELGRIL 502
FMWKNL SSVIPDTSPLFT S TSELGRIL
Sbjct: 433 FMWKNLAFSSVIPDTSPLFT*SSTSELGRIL 525
Score = 112 bits (240), Expect(3) = 6e-047
Identities = 46/58 (79%), Positives = 48/58 (82%)
Frame = +1 / -2
Query: 502 QDPSQLAGDGLREQRGGVRDHAAQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
QDP+QLAG GLREQRGGVRDHAA+ QVLPHE V VQGH D G GARGQPQHGRHP
Sbjct: 525 QDPAQLAGAGLREQRGGVRDHAAKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHP 352
Score = 86.3 bits (182), Expect(3) = 6e-047
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = +1 / -2
Query: 823 AVQGREGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL 954
AVQGREGRHG+QR+GL+A ED QR P QGV GRRLRAHRLQDPL
Sbjct: 204 AVQGREGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL 73
Score = 47.3 bits (97), Expect(4) = 7e-022
Identities = 25/41 (60%), Positives = 25/41 (60%)
Frame = -3 / +2
Query: 944 WXXXXXXXRPHTP*CGRRWPSS*ACSP*R*YP*RPSRPCTA 822
W RP TP* G R SS A SP R* P*RPSRPCTA
Sbjct: 83 WRR*ARRRRPRTP*SGGRCSSSSAYSPSR*CP*RPSRPCTA 205
Score = 46.4 bits (95), Expect(4) = 7e-022
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1 / +3
Query: 568 QRDPGHLPVVHEVHHQRVGK 509
QRDPGHLPVVH V HQRVG+
Sbjct: 459 QRDPGHLPVVHVVQHQRVGQ 518
Score = 45.5 bits (93), Expect(4) = 7e-022
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1 / +3
Query: 688 RVAHVDAVRVGAVPGRRHIDVLDQ 617
RVAHVDAVRVGAVPGRR +L+Q
Sbjct: 339 RVAHVDAVRVGAVPGRRDRHILNQ 410
Score = 42.8 bits (87), Expect(2) = 2e-099
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +2 / -2
Query: 956 ENIKMEDSGYPIIIDMKYCPNKL 1024
ENIK ED PII+D KYCPNK+
Sbjct: 72 ENIKREDWSNPIIMDRKYCPNKI 4
Score = 38.2 bits (77), Expect(2) = 5e-087
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = -2 / +2
Query: 1020 LLGQYFMSMMMG*PESSILIFS 955
LLGQYF+SM+MG +SS+L+FS
Sbjct: 8 LLGQYFLSMIMGFDQSSLLMFS 73
Score = 34.1 bits (68), Expect(3) = 6e-047
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1 / -1
Query: 958 EYQDGGLGLPHHHRHEVLPQQ 1020
E+Q+GGL PH+H EVLP Q
Sbjct: 70 EHQEGGLVEPHYHGQEVLP*Q 8
Score = 26.7 bits (52), Expect(4) = 7e-022
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -1 / +1
Query: 1018 VGAVLHVDDDGVARVLHLDIL 956
V AVL V D+GV VL LD+L
Sbjct: 10 VRAVLPVHDNGVRPVLPLDVL 72
>gb|BG411749.1|BG411749 OV2_37_E12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 670
Score = 360 bits (781), Expect(2) = 1e-098
Identities = 146/169 (86%), Positives = 159/169 (94%)
Frame = +2 / +2
Query: 773 TGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASKIH 952
TGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT+NG+RIKAYEDAASVLTASKIH
Sbjct: 2 TGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIH 181
Query: 953 YENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNLLCSAK 1132
YENIKMEDS PIIIDMKYCPNK+CTA+GASKVTVKDV+FKN+TGTS++PEAV+LLCS K
Sbjct: 182 YENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSASPEAVSLLCSDK 361
Query: 1133 IPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELACF*NHHRP 1279
IPCTGVTMD+V ++YSG NNKTMAVC+NAKGSA GCLKELACF* P
Sbjct: 362 IPCTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF*TSIHP 508
Score = 284 bits (615), Expect = 2e-075
Identities = 131/164 (79%), Positives = 138/164 (84%)
Frame = -2 / -2
Query: 1263 *KHASSLRQPLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVP 1084
*KHASSLRQP+ALPLAF HTA LT SMVTPV GIL+EQSRLTASG+ EVP
Sbjct: 492 *KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVP 313
Query: 1083 VMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYAL 904
V FLK TSLTVTLEAPLAV LLGQYFMSM+MG ESSIL+FS*WILEAVSTEAASSYAL
Sbjct: 312 VTFLKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYAL 133
Query: 903 MRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPV 772
+R PL VF SVQS TL+SVTSFSSLYRPRLPMLMPWPGP VTPV
Sbjct: 132 IRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPV 1
Score = 134 bits (287), Expect(3) = 4e-043
Identities = 56/71 (78%), Positives = 62/71 (87%)
Frame = +1 / +1
Query: 823 AVQGREGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL*EYQDGGLGLPHHHRH 1002
AVQGREGRHG+QR+GL+A ED QR P QGV GRRLRAHRLQDPL*E+QDGGL PH+HRH
Sbjct: 52 AVQGREGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRH 231
Query: 1003 EVLPQQVMHRQ 1035
EVLP Q +HRQ
Sbjct: 232 EVLP*QNLHRQ 264
Score = 69.8 bits (146), Expect(2) = 3e-023
Identities = 38/69 (55%), Positives = 38/69 (55%)
Frame = -3 / -3
Query: 1028 CITCWGSTSCR**WGXXXXXXXXXXXXSWXXXXXXXRPHTP*CGRRWPSS*ACSP*R*YP 849
C C GSTSCR**WG SW RP TP* G R SS A SP R* P
Sbjct: 257 CRFC*GSTSCR**WGSTSPPS*CSHSGSWRR*ARRRRPRTP*SGGRCSSSSAYSPSR*CP 78
Query: 848 *RPSRPCTA 822
*RPSRPCTA
Sbjct: 77 *RPSRPCTA 51
Score = 69.3 bits (145), Expect(3) = 4e-021
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = -1 / -1
Query: 1018 VGAVLHVDDDGVARVLHLDILIVDLXXXXXXXGVLIRLDADAVGRLLK 875
V AVLHVDD+GV RVLHLD+LIVDL GVL+RLD +AV RLL+
Sbjct: 247 VRAVLHVDDNGVRRVLHLDVLIVDLGGGEHGGGVLVRLDPEAVARLLQ 104
Score = 61.1 bits (127), Expect(2) = 3e-023
Identities = 29/50 (58%), Positives = 30/50 (60%)
Frame = -1 / -1
Query: 1264 LEACELLEATLGAALSVLAYGHXXXXXXXXXXXXXVHGDAGAWDLGRAEQ 1115
LEACELLEA GAAL VLAYGH +HGDA A DL AEQ
Sbjct: 493 LEACELLEAACGAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAEQ 344
Score = 52.4 bits (108), Expect(3) = 4e-043
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3 / +3
Query: 1194 RPWPYARTLRAAPRVASRSSHASR 1265
RPWPYA+T RAAP+ ASRSSHASR
Sbjct: 423 RPWPYAKTPRAAPQAASRSSHASR 494
Score = 47.8 bits (98), Expect(3) = 4e-021
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -3 / -3
Query: 1265 SRSMRAP*GNPWRCP*RSCIRPWS 1194
SRSMRAP*G+ WRCP R IRPWS
Sbjct: 494 SRSMRAP*GSLWRCPWRFGIRPWS 423
Score = 29.0 bits (57), Expect(3) = 4e-043
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1 / +1
Query: 1099 PGGRQPALLCQDPM 1140
P GRQPALL QDP+
Sbjct: 328 PRGRQPALLRQDPL 369
Score = 24.0 bits (46), Expect(3) = 4e-021
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 1163 RRPW*RRCMGS 1131
R PW*R+C GS
Sbjct: 392 RYPW*RQCRGS 360
Score = 22.6 bits (43), Expect(2) = 1e-098
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1 / +3
Query: 1267 PPSTHLSSYTMCLVV 1311
PPSTHL+ Y + +V
Sbjct: 495 PPSTHLALYLVISLV 539
>gb|CW330184.1|CW330184 104_827_11480239_148_36008_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480239, DNA
sequence
Length = 729
Score = 361 bits (783), Expect = 1e-098
Identities = 144/229 (62%), Positives = 176/229 (76%)
Frame = +2 / +2
Query: 581 FFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTS 760
FFH+N++ K++LI V V APG+SPNTDGIHMGDS VTI+ T IGVGDDCISIGPG+
Sbjct: 2 FFHLNIFASKNVLIDKVTVKAPGNSPNTDGIHMGDSENVTISGTTIGVGDDCISIGPGSK 181
Query: 761 KVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLTA 940
+ I GV CGPGHGIS+GSLGRYKDEKDV D+ VK CTL T NG+RIK+YED+ S
Sbjct: 182 TIRIDGVKCGPGHGISVGSLGRYKDEKDVEDVKVKGCTLVGTTNGLRIKSYEDSKSSPKV 361
Query: 941 SKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNLL 1120
+K YE++ M++ YPIIID KYCPN +C +GASKV V DV FKNI GTS+TPEA+ L
Sbjct: 362 TKFVYEDVTMDNVSYPIIIDQKYCPNNICVRSGASKVAVTDVVFKNIHGTSNTPEAITLN 541
Query: 1121 CSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELACF*N 1267
C+ +PC GV + +V+IKY+ +NNKTMAVCKNA G + G KELAC *+
Sbjct: 542 CADNLPCQGVQLHNVDIKYNKSNNKTMAVCKNAVGKSFGLSKELACI*S 688
Score = 250 bits (541), Expect = 3e-065
Identities = 122/226 (53%), Positives = 140/226 (61%)
Frame = -2 / -1
Query: 1257 HASSLRQPLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVPVM 1078
HASS +P LP AFL TA T TP HG L+ Q + ASGV EVP M
Sbjct: 678 HASSFDKPKDLPTAFLQTAMVLLLDLLYLMSTLWSCTPWHGRLSAQLSVMASGVLEVPWM 499
Query: 1077 FLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMR 898
FLK TS+T TL+AP L GQYF SMM+G S++ S L + + SSY LMR
Sbjct: 498 FLKTTSVTATLDAPDLTQMLFGQYFWSMMIGYETLSMVTSSYTNLVTLGDDLESSYDLMR 319
Query: 897 TPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTP 718
PL V SVQ T S TSFSSLY PRLP LMPWPGP +TP + + +PGPMEMQSSPTP
Sbjct: 318 RPLVVPTSVQPFTFTSSTSFSSLYLPRLPTLMPWPGPHLTPSIRIVLLPGPMEMQSSPTP 139
Query: 717 MTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKN 580
M V +MVT ESPMW+PSVLGL PGA T+T I+ L M WKN
Sbjct: 138 MVVPLMVTFSESPMWIPSVLGLFPGAFTVTLSINTFLLAKMLRWKN 1
>gb|BG355410.1|BG355410 EM1_16_B04.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 522
Score = 356 bits (772), Expect = 5e-097
Identities = 144/171 (84%), Positives = 157/171 (91%)
Frame = +2 / +1
Query: 623 KDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHG 802
KDV VTAPGDSPNTDGIH+GDSS VTIT T IGVGDDCISIGPG++ +N+TGVTCGPGHG
Sbjct: 10 KDVTVTAPGDSPNTDGIHIGDSSKVTITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHG 189
Query: 803 ISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSG 982
IS+GSLGRYKDEKDVTDINVKDCTLKKT+NGVRIK+YEDAA V+TASK+HYENI M+D
Sbjct: 190 ISVGSLGRYKDEKDVTDINVKDCTLKKTSNGVRIKSYEDAACVITASKLHYENIAMDDVA 369
Query: 983 YPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNLLCSAKI 1135
PIIIDMKYCPNK+CTA G SKVTVKDVTFKNITGTSSTP AV+LLCS KI
Sbjct: 370 NPIIIDMKYCPNKICTAKGDSKVTVKDVTFKNITGTSSTPGAVSLLCSDKI 522
Score = 303 bits (657), Expect = 3e-081
Identities = 137/171 (80%), Positives = 147/171 (85%)
Frame = -2 / -2
Query: 1134 ILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS 955
IL+EQSRLTA GV+EVPVMFL VTSLTVTLE+PLAV LLGQYFMSMMMG SS+ +FS
Sbjct: 521 ILSEQSRLTAPGVDEVPVMFLNVTSLTVTLESPLAVQILLGQYFMSMMMGLATSSMAMFS 342
Query: 954 *WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTP 775
*W LEAV T AASS L+RTPL VFLSVQSLTL+SVTSFSSLY PRLP LMPWPGPQVTP
Sbjct: 341 *WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQVTP 162
Query: 774 VMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSL 622
V +PGPMEMQSSPTPM V VMVT +ESPMWMPSVLGLSPGAVT+TSL
Sbjct: 161 VTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMPSVLGLSPGAVTVTSL 9
Score = 100 bits (214), Expect(4) = 9e-028
Identities = 45/70 (64%), Positives = 50/70 (71%)
Frame = +1 / +3
Query: 826 VQGREGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL*EYQDGGLGLPHHHRHE 1005
VQG EG G+QRQGLHA ED Q RP Q + GRR+R H LQ PL E+ G G PHHHRHE
Sbjct: 213 VQG*EGCDGHQRQGLHAQEDQQWRPDQVLRGRRVRDHCLQAPLREHSHGRRGQPHHHRHE 392
Query: 1006 VLPQQVMHRQ 1035
VLPQQ +H Q
Sbjct: 393 VLPQQDLHCQ 422
Score = 34.1 bits (68), Expect(4) = 9e-028
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +1 / +3
Query: 622 QGRQCDGARGQPQHGRHP 675
QGR ARGQPQH RHP
Sbjct: 9 QGRDRHRARGQPQHRRHP 62
Score = 23.5 bits (45), Expect(4) = 9e-028
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / +3
Query: 1099 PGGRQPALLCQD 1134
PG RQPALL Q+
Sbjct: 486 PGSRQPALLRQN 521
Score = 22.6 bits (43), Expect(4) = 9e-028
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / +1
Query: 755 TSKVNITGVTCGPG 796
+SKV ITG T G G
Sbjct: 73 SSKVTITGTTIGVG 114
>gb|CF485728.1|CF485728 POL1_33_F06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F06_A002 3', mRNA sequence
Length = 609
Score = 355 bits (770), Expect = 9e-097
Identities = 144/167 (86%), Positives = 157/167 (94%)
Frame = +2 / +3
Query: 779 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASKIHYE 958
VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT+NG+RIKAYEDAASVLTASKIHYE
Sbjct: 3 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYE 182
Query: 959 NIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIP 1138
NIKMEDS PIIIDMKYCPNK+CTA+GASKVTVKDV+FKN+TGTS++PEAV+LLCS KIP
Sbjct: 183 NIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIP 362
Query: 1139 CTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELACF*NHHRP 1279
CTGVTMD+V ++YSG NNKTMAVC+NAKGSA GCLKELACF* P
Sbjct: 363 CTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF*TSIHP 503
Score = 279 bits (604), Expect = 7e-074
Identities = 129/162 (79%), Positives = 136/162 (83%)
Frame = -2 / -3
Query: 1263 *KHASSLRQPLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVP 1084
*KHASSLRQP+ALPLAF HTA LT SMVTPV GIL+EQSRLTASG+ EVP
Sbjct: 487 *KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVP 308
Query: 1083 VMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYAL 904
V FLK TSLTVTLEAPLAV LLGQYFMSM+MG ESSIL+FS*WILEAVSTEAASSYAL
Sbjct: 307 VTFLKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYAL 128
Query: 903 MRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVT 778
+R PL VF SVQS TL+SVTSFSSLYRPRLPMLMPWPGP VT
Sbjct: 127 IRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVT 2
Score = 134 bits (287), Expect(3) = 4e-043
Identities = 56/71 (78%), Positives = 62/71 (87%)
Frame = +1 / +2
Query: 823 AVQGREGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL*EYQDGGLGLPHHHRH 1002
AVQGREGRHG+QR+GL+A ED QR P QGV GRRLRAHRLQDPL*E+QDGGL PH+HRH
Sbjct: 47 AVQGREGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRH 226
Query: 1003 EVLPQQVMHRQ 1035
EVLP Q +HRQ
Sbjct: 227 EVLP*QNLHRQ 259
Score = 69.8 bits (146), Expect(2) = 3e-023
Identities = 38/69 (55%), Positives = 38/69 (55%)
Frame = -3 / -1
Query: 1028 CITCWGSTSCR**WGXXXXXXXXXXXXSWXXXXXXXRPHTP*CGRRWPSS*ACSP*R*YP 849
C C GSTSCR**WG SW RP TP* G R SS A SP R* P
Sbjct: 252 CRFC*GSTSCR**WGSTSPPS*CSHSGSWRR*ARRRRPRTP*SGGRCSSSSAYSPSR*CP 73
Query: 848 *RPSRPCTA 822
*RPSRPCTA
Sbjct: 72 *RPSRPCTA 46
Score = 69.3 bits (145), Expect(3) = 4e-021
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = -1 / -2
Query: 1018 VGAVLHVDDDGVARVLHLDILIVDLXXXXXXXGVLIRLDADAVGRLLK 875
V AVLHVDD+GV RVLHLD+LIVDL GVL+RLD +AV RLL+
Sbjct: 242 VRAVLHVDDNGVRRVLHLDVLIVDLGGGEHGGGVLVRLDPEAVARLLQ 99
Score = 61.1 bits (127), Expect(2) = 3e-023
Identities = 29/50 (58%), Positives = 30/50 (60%)
Frame = -1 / -2
Query: 1264 LEACELLEATLGAALSVLAYGHXXXXXXXXXXXXXVHGDAGAWDLGRAEQ 1115
LEACELLEA GAAL VLAYGH +HGDA A DL AEQ
Sbjct: 488 LEACELLEAACGAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAEQ 339
Score = 52.4 bits (108), Expect(3) = 4e-043
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3 / +1
Query: 1194 RPWPYARTLRAAPRVASRSSHASR 1265
RPWPYA+T RAAP+ ASRSSHASR
Sbjct: 418 RPWPYAKTPRAAPQAASRSSHASR 489
Score = 47.8 bits (98), Expect(3) = 4e-021
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -3 / -1
Query: 1265 SRSMRAP*GNPWRCP*RSCIRPWS 1194
SRSMRAP*G+ WRCP R IRPWS
Sbjct: 489 SRSMRAP*GSLWRCPWRFGIRPWS 418
Score = 29.0 bits (57), Expect(3) = 4e-043
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1 / +2
Query: 1099 PGGRQPALLCQDPM 1140
P GRQPALL QDP+
Sbjct: 323 PRGRQPALLRQDPL 364
Score = 24.0 bits (46), Expect(3) = 4e-021
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 1163 RRPW*RRCMGS 1131
R PW*R+C GS
Sbjct: 387 RYPW*RQCRGS 355
>gb|CF489342.1|CF489342 POL1_57_B05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_B05_A002 3', mRNA sequence
Length = 670
Score = 353 bits (766), Expect(2) = 1e-096
Identities = 143/166 (86%), Positives = 156/166 (93%)
Frame = +2 / +3
Query: 782 TCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASKIHYEN 961
TCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT+NG+RIKAYEDAASVLTASKIHYEN
Sbjct: 3 TCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYEN 182
Query: 962 IKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPC 1141
IKMEDS PIIIDMKYCPNK+CTA+GASKVTVKDV+FKN+TGTS++PEAV+LLCS KIPC
Sbjct: 183 IKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPC 362
Query: 1142 TGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELACF*NHHRP 1279
TGVTMD+V ++YSG NNKTMAVC+NAKGSA GCLKELACF* P
Sbjct: 363 TGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF*TSIHP 500
Score = 277 bits (599), Expect = 3e-073
Identities = 128/161 (79%), Positives = 135/161 (83%)
Frame = -2 / -1
Query: 1263 *KHASSLRQPLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVP 1084
*KHASSLRQP+ALPLAF HTA LT SMVTPV GIL+EQSRLTASG+ EVP
Sbjct: 484 *KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVP 305
Query: 1083 VMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYAL 904
V FLK TSLTVTLEAPLAV LLGQYFMSM+MG ESSIL+FS*WILEAVSTEAASSYAL
Sbjct: 304 VTFLKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYAL 125
Query: 903 MRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQV 781
+R PL VF SVQS TL+SVTSFSSLYRPRLPMLMPWPGP V
Sbjct: 124 IRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHV 2
Score = 134 bits (287), Expect(3) = 4e-043
Identities = 56/71 (78%), Positives = 62/71 (87%)
Frame = +1 / +2
Query: 823 AVQGREGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL*EYQDGGLGLPHHHRH 1002
AVQGREGRHG+QR+GL+A ED QR P QGV GRRLRAHRLQDPL*E+QDGGL PH+HRH
Sbjct: 44 AVQGREGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRH 223
Query: 1003 EVLPQQVMHRQ 1035
EVLP Q +HRQ
Sbjct: 224 EVLP*QNLHRQ 256
Score = 69.8 bits (146), Expect(2) = 3e-023
Identities = 38/69 (55%), Positives = 38/69 (55%)
Frame = -3 / -2
Query: 1028 CITCWGSTSCR**WGXXXXXXXXXXXXSWXXXXXXXRPHTP*CGRRWPSS*ACSP*R*YP 849
C C GSTSCR**WG SW RP TP* G R SS A SP R* P
Sbjct: 249 CRFC*GSTSCR**WGSTSPPS*CSHSGSWRR*ARRRRPRTP*SGGRCSSSSAYSPSR*CP 70
Query: 848 *RPSRPCTA 822
*RPSRPCTA
Sbjct: 69 *RPSRPCTA 43
Score = 69.3 bits (145), Expect(3) = 4e-021
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = -1 / -3
Query: 1018 VGAVLHVDDDGVARVLHLDILIVDLXXXXXXXGVLIRLDADAVGRLLK 875
V AVLHVDD+GV RVLHLD+LIVDL GVL+RLD +AV RLL+
Sbjct: 239 VRAVLHVDDNGVRRVLHLDVLIVDLGGGEHGGGVLVRLDPEAVARLLQ 96
Score = 61.1 bits (127), Expect(2) = 3e-023
Identities = 29/50 (58%), Positives = 30/50 (60%)
Frame = -1 / -3
Query: 1264 LEACELLEATLGAALSVLAYGHXXXXXXXXXXXXXVHGDAGAWDLGRAEQ 1115
LEACELLEA GAAL VLAYGH +HGDA A DL AEQ
Sbjct: 485 LEACELLEAACGAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAEQ 336
Score = 52.4 bits (108), Expect(3) = 4e-043
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3 / +1
Query: 1194 RPWPYARTLRAAPRVASRSSHASR 1265
RPWPYA+T RAAP+ ASRSSHASR
Sbjct: 415 RPWPYAKTPRAAPQAASRSSHASR 486
Score = 47.8 bits (98), Expect(3) = 4e-021
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -3 / -2
Query: 1265 SRSMRAP*GNPWRCP*RSCIRPWS 1194
SRSMRAP*G+ WRCP R IRPWS
Sbjct: 486 SRSMRAP*GSLWRCPWRFGIRPWS 415
Score = 29.0 bits (57), Expect(3) = 4e-043
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1 / +2
Query: 1099 PGGRQPALLCQDPM 1140
P GRQPALL QDP+
Sbjct: 320 PRGRQPALLRQDPL 361
Score = 24.0 bits (46), Expect(3) = 4e-021
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -2
Query: 1163 RRPW*RRCMGS 1131
R PW*R+C GS
Sbjct: 384 RYPW*RQCRGS 352
Score = 22.6 bits (43), Expect(2) = 1e-096
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 1267 PPSTHLSSYTMCLVV 1311
PPSTHL+ Y + +V
Sbjct: 487 PPSTHLALYLVISLV 531
>gb|CF481344.1|CF481344 POL1_71_A04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_71_A04_A002 5', mRNA sequence
Length = 592
Score = 188 bits (406), Expect(3) = 4e-089
Identities = 75/83 (90%), Positives = 76/83 (91%)
Frame = -2 / -2
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAF
Sbjct: 375 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFA 196
Query: 198 LSVLPLPEAPNLVMSKDPPGPDA 130
LS LP PEAPNL+MS DPPGPDA
Sbjct: 195 LSFLPSPEAPNLLMSNDPPGPDA 127
Score = 184 bits (397), Expect(3) = 1e-095
Identities = 74/81 (91%), Positives = 78/81 (96%)
Frame = +2 / +2
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DS KAVQEAW SACGGTGKQTILIPKGD+LVGPLNFTGPCK
Sbjct: 134 GPGGSFDISKLGASGDGKKDSAKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCK 313
Query: 317 GDVTIQVNGNLLATTDLSQYK 379
GDVTIQV+GNLLATTDLSQYK
Sbjct: 314 GDVTIQVDGNLLATTDLSQYK 376
Score = 168 bits (361), Expect(3) = 1e-095
Identities = 65/72 (90%), Positives = 70/72 (97%)
Frame = +2 / +2
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+V NGEVSGIT
Sbjct: 377 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVTNGEVSGIT 556
Query: 566 LLNSKFFHMNMY 601
LLN+KFFHMN++
Sbjct: 557 LLNAKFFHMNVF 592
Score = 162 bits (348), Expect(3) = 3e-076
Identities = 65/83 (78%), Positives = 72/83 (86%)
Frame = +1 / +1
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPM 312
VRA V+RH QVGRL + Q+G EGCAGG+ +GVRRHREADDPHP GRLPRRTTQLHRP+
Sbjct: 130 VRAWRVVRHQQVGRLRRRQEGQREGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 309
Query: 313 QGRRDHPGEWQSAGDHGPKPVQG 381
QGRRDHPG QSAGDHGP+PVQG
Sbjct: 310 QGRRDHPGGRQSAGDHGPEPVQG 378
Score = 146 bits (313), Expect(3) = 4e-089
Identities = 62/70 (88%), Positives = 63/70 (90%)
Frame = -2 / -2
Query: 594 FMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRL 415
FMWKNL SSVIPDTSPL T S TSELGRILQSYFL EFLLHTAGPCPSSFPLPV+TRL
Sbjct: 585 FMWKNLAFSSVIPDTSPLVT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRL 406
Query: 414 STRRISIQLP 385
STRRISIQLP
Sbjct: 405 STRRISIQLP 376
Score = 130 bits (278), Expect(3) = 3e-076
Identities = 56/71 (78%), Positives = 61/71 (85%)
Frame = +1 / +1
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLR+QRGGVRDHA
Sbjct: 379 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLRDQRGGVRDHA 558
Query: 568 AQLQVLPHEHV 600
A+ QVLPHE V
Sbjct: 559 AKRQVLPHERV 591
Score = 116 bits (248), Expect(2) = 3e-045
Identities = 56/83 (67%), Positives = 57/83 (68%)
Frame = -1 / -1
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCPXXXXXXX 200
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 376 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHSLR 197
Query: 199 XXXXXXXXXAQLGDVEGPTGPGR 131
AQL DVE P PGR
Sbjct: 196 AVLLAVAGGAQLADVERPARPGR 128
Score = 88.1 bits (186), Expect(2) = 3e-045
Identities = 37/64 (57%), Positives = 43/64 (67%)
Frame = -1 / -1
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPV H V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 559 QRDPGHLPVGHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 380
Query: 388 TMIL 377
T++L
Sbjct: 379 TLVL 368
Score = 68.9 bits (144), Expect(4) = 1e-024
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +3
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 378 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 506
Score = 63.4 bits (132), Expect(2) = 7e-022
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -3
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 377 PCTGSGPWSPADCRPPGWSRRPC 309
Score = 62.9 bits (131), Expect(2) = 7e-022
Identities = 26/40 (65%), Positives = 29/40 (72%)
Frame = -3 / -3
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRRTP PPAQPS PSC +RRPT *CR T +ART L+
Sbjct: 239 CRRTPTSMPPAQPSRCPSCRRRRRPTC*CRTTRQARTPLS 120
Score = 47.8 bits (98), Expect(4) = 1e-024
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +3
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 312 RAT*PSRWTAICWRPRT*ASTRV 380
Score = 39.1 bits (79), Expect(3) = 1e-095
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +2
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 20 KMACTGNAMRAFFLLAFVCAAH 85
Score = 35.4 bits (71), Expect(3) = 4e-089
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -3
Query: 104 PSHHARCRRALEGTRLSLHCLYMP 33
PS HAR RR G RLS HCL P
Sbjct: 95 PSQHARRRRTPGGRRLSSHCLCTP 24
Score = 35.0 bits (70), Expect(3) = 3e-076
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1 / +1
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGK 108
+ ++G++RQC+ESL+P L RA EG+
Sbjct: 13 TNKNGVHRQCDESLLPPGVRLRRACWEGR 99
Score = 30.4 bits (60), Expect(4) = 1e-024
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +3
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 123 KRRPGLAGRSTSASWAP 173
Score = 29.5 bits (58), Expect(4) = 1e-024
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3 / +3
Query: 30 RWHV*TMQ*EPCSF*RSSAPCMVRRQSQRTTIQKRPGP 143
+W M+*EP S RSSAP M+ R T ++ P
Sbjct: 21 KWRAQAMR*EPSSSWRSSAPRMLGRTLLPRTAMRKRRP 134
>gb|CW323366.1|CW323366 104_817_11476592_148_35963_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476592, DNA
sequence
Length = 680
Score = 282 bits (610), Expect(2) = 4e-094
Identities = 111/135 (82%), Positives = 125/135 (92%)
Frame = +2 / -3
Query: 518 SLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGV 697
+LV+DF NN VSGITLLNSKFFHMN+++CK + IKDV VTAPGDSPNTDGIH+GDSS V
Sbjct: 405 TLVLDFCNNATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKV 226
Query: 698 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 877
TIT T IGVGDDCISIGPG++ +N+TGVTCGPGHGIS+GSLGRYKDEKDVTDINVKDCTL
Sbjct: 225 TITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTL 46
Query: 878 KKTANGVRIKAYEDA 922
KKT+NGVRIK+YEDA
Sbjct: 45 KKTSNGVRIKSYEDA 1
Score = 227 bits (491), Expect(2) = 2e-070
Identities = 101/134 (75%), Positives = 108/134 (80%)
Frame = -2 / +2
Query: 921 ASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPM 742
ASS L+RTPL VFLSVQSLTL+SVTSFSSLY PRLP LMPWPGPQVTPV +PGPM
Sbjct: 2 ASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQVTPVTLIPVLPGPM 181
Query: 741 EMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSV 562
EMQSSPTPM V VMVT +ESPMWMPSVLGLSPGAVT+TSLI LH FMWKNLE S V
Sbjct: 182 EMQSSPTPMVVPVMVTLEESPMWMPSVLGLSPGAVTVTSLIVTPLHWNTFMWKNLEFSRV 361
Query: 561 IPDTSPLFTKSITS 520
IP+T L KS T+
Sbjct: 362 IPETVALLQKSSTN 403
Score = 85.8 bits (181), Expect(2) = 4e-094
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = +2 / -3
Query: 389 NWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPN 517
NWIEI VDNLVI+GKG LDGQG VW N C +KYDCKILPN
Sbjct: 651 NWIEIEHVDNLVISGKGTLDGQGKQVWDNNKCAQKYDCKILPN 523
Score = 74.4 bits (156), Expect(4) = 1e-030
Identities = 32/51 (62%), Positives = 35/51 (68%)
Frame = +1 / -2
Query: 523 GDGLREQRGGVRDHAAQLQVLPHEHVQVQGHADQGRQCDGARGQPQHGRHP 675
G L +QR +RDH A+LQVLPHE V VQ DQGR ARGQPQH RHP
Sbjct: 400 GARLLQQRHRLRDHPAELQVLPHERVPVQRRDDQGRDRHRARGQPQHRRHP 248
Score = 61.1 bits (127), Expect(2) = 2e-070
Identities = 29/43 (67%), Positives = 30/43 (69%)
Frame = -2 / +2
Query: 516 LGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTRRISIQL 388
LGRILQSYF L HT P PS PLP+MTRLST ISIQL
Sbjct: 524 LGRILQSYF*AHLLLSHTCLPWPSRVPLPLMTRLSTCSISIQL 652
Score = 56.1 bits (116), Expect(4) = 1e-030
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +1 / -2
Query: 391 LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQ 516
LDRD R QPCH RQ RR G + + Q+ + E+RLQDP+Q
Sbjct: 649 LDRDRARRQPCHQRQRHPRRPGQTSMGQQQMCSEIRLQDPAQ 524
Score = 44.6 bits (91), Expect(4) = 1e-030
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +1 / -2
Query: 826 VQGREGRHGYQRQGLHA*EDGQRRPHQGV*GR 921
VQG EG G+QRQGLHA ED Q RP Q + GR
Sbjct: 97 VQG*EGCDGHQRQGLHAQEDQQWRPDQVLRGR 2
Score = 22.6 bits (43), Expect(4) = 1e-030
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / -3
Query: 755 TSKVNITGVTCGPG 796
+SKV ITG T G G
Sbjct: 237 SSKVTITGTTIGVG 196
>gb|CF484527.1|CF484527 POL1_25_H01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_25_H01_A002 5', mRNA sequence
Length = 586
Score = 190 bits (410), Expect(3) = 4e-089
Identities = 76/83 (91%), Positives = 77/83 (92%)
Frame = -2 / -1
Query: 378 LYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFV 199
LYWLRSVVASRLP TWMVTSPLHGPVKLSGPTR SPLGMRIVCFPVPPHAD HASCTAFV
Sbjct: 382 LYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFV 203
Query: 198 LSVLPLPEAPNLVMSKDPPGPDA 130
LS LP PEAPNL+MS DPPGPDA
Sbjct: 202 LSFLPSPEAPNLLMSNDPPGPDA 134
Score = 187 bits (402), Expect(3) = 6e-094
Identities = 75/81 (92%), Positives = 79/81 (97%)
Frame = +2 / +3
Query: 137 GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCK 316
GPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVGPLNFTGPCK
Sbjct: 141 GPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCK 320
Query: 317 GDVTIQVNGNLLATTDLSQYK 379
GDVTIQV+GNLLATTDLSQYK
Sbjct: 321 GDVTIQVDGNLLATTDLSQYK 383
Score = 166 bits (356), Expect(3) = 2e-075
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +2
Query: 133 VRARWVLRHHQVGRLWQWQDG*HEGCAGGVGIGVRRHREADDPHPQGRLPRRTTQLHRPM 312
VRA V+RH QVGRL + Q+G HEGCAGG+ +GVRRHREADDPHP GRLPRRTTQLHRP+
Sbjct: 137 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 316
Query: 313 QGRRDHPGEWQSAGDHGPKPVQG 381
QGRRDHPG QSAGDHGP+PVQG
Sbjct: 317 QGRRDHPGGRQSAGDHGPEPVQG 385
Score = 160 bits (344), Expect(3) = 6e-094
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +2 / +3
Query: 386 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 565
GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSGIT
Sbjct: 384 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 563
Query: 566 LLNSKFF 586
LLN+KFF
Sbjct: 564 LLNAKFF 584
Score = 144 bits (309), Expect(3) = 4e-089
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = -2 / -1
Query: 588 WKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLST 409
WKNL SSVIPDTSPLFT S TSELGRILQSYFL EFLLHTAGPCPSSFPLPV+TRLST
Sbjct: 586 WKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLST 407
Query: 408 RRISIQLP 385
RRISIQLP
Sbjct: 406 RRISIQLP 383
Score = 123 bits (264), Expect(3) = 2e-075
Identities = 54/67 (80%), Positives = 58/67 (86%)
Frame = +1 / +2
Query: 388 *LDRDSTRGQPCHHRQGKARRAGASRVEQELLRQEVRLQDPSQLAGDGLREQRGGVRDHA 567
*LDRD GQP HRQG+ARRAG RVEQEL+RQEVRLQDP+QLAG GLREQRGGVRDHA
Sbjct: 386 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 565
Query: 568 AQLQVLP 588
A+ QVLP
Sbjct: 566 AKRQVLP 586
Score = 116 bits (248), Expect(2) = 4e-046
Identities = 56/83 (67%), Positives = 57/83 (68%)
Frame = -1 / -3
Query: 379 LVLA*VRGRQQIAIHLDGHVALAWACEVEWSDEEVALGDEDRLLPGAAARRCPXXXXXXX 200
LVLA VRGRQQIA+HLDGHVALA A EVEWSDE VAL DEDRLLPGAAARR P
Sbjct: 383 LVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHSLR 204
Query: 199 XXXXXXXXXAQLGDVEGPTGPGR 131
AQL DVE P PGR
Sbjct: 203 AVLLAVAGGAQLADVERPARPGR 135
Score = 91.3 bits (193), Expect(2) = 4e-046
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1 / -3
Query: 568 QRDPGHLPVVHEVHHQRVGKXXXXXXXXXXXXAPHGWPLPVELSLAGDDKVVHA*NLDPI 389
QRDPGHLPVVH V HQRVG+ APHG LPVEL LAGD +VVH +LDP+
Sbjct: 566 QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPV 387
Query: 388 TMIL 377
T++L
Sbjct: 386 TLVL 375
Score = 68.9 bits (144), Expect(4) = 9e-025
Identities = 31/43 (72%), Positives = 31/43 (72%)
Frame = +3 / +1
Query: 387 VIGSRFYAWTTLSSPARESSTGRGQPCGARTPASRSTTARSFP 515
V GSR WTT SPAR SSTGR PCGART A RSTTARS P
Sbjct: 385 VTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 513
Score = 68.4 bits (143), Expect(2) = 2e-023
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / -2
Query: 242 CRRTPMPTPPAQPSCYPSCHCQRRPTW*CRRTHRARTLLN 123
CRRTP PPAQPSC PSC +RRPT *CR T +ART L+
Sbjct: 246 CRRTPTSMPPAQPSCCPSCRRRRRPTC*CRTTRQARTPLS 127
Score = 63.4 bits (132), Expect(2) = 2e-023
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -2
Query: 380 PCTGLGPWSPADCHSPGWSRRPC 312
PCTG GPWSPADC PGWSRRPC
Sbjct: 384 PCTGSGPWSPADCRPPGWSRRPC 316
Score = 47.8 bits (98), Expect(4) = 9e-025
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +1
Query: 315 RAT*PSR*MAICWRPRT*ASTRI 383
RAT*PSR AICWRPRT*ASTR+
Sbjct: 319 RAT*PSRWTAICWRPRT*ASTRV 387
Score = 39.1 bits (79), Expect(3) = 6e-094
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +3
Query: 29 KMACIDNAMRALFLLALFCTVH 94
KMAC NAMRA FLLA C H
Sbjct: 27 KMACTGNAMRAFFLLAFVCAAH 92
Score = 35.4 bits (71), Expect(3) = 4e-089
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -2
Query: 104 PSHHARCRRALEGTRLSLHCLYMP 33
PS HAR RR G RLS HCL P
Sbjct: 102 PSQHARRRRTPGGRRLSSHCLCTP 31
Score = 35.0 bits (70), Expect(3) = 2e-075
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1 / +2
Query: 22 SQQDGMYRQCNESLVPSSALLHRAW*EGK 108
+ ++G++RQC+ESL+P L RA EG+
Sbjct: 20 TNKNGVHRQCDESLLPPGVRLRRACWEGR 106
Score = 30.4 bits (60), Expect(4) = 9e-025
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 126 QKRPGPVGPSTSPSWAP 176
++RPG G STS SWAP
Sbjct: 130 KRRPGLAGRSTSASWAP 180
Score = 29.5 bits (58), Expect(4) = 9e-025
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3 / +1
Query: 30 RWHV*TMQ*EPCSF*RSSAPCMVRRQSQRTTIQKRPGP 143
+W M+*EP S RSSAP M+ R T ++ P
Sbjct: 28 KWRAQAMR*EPSSSWRSSAPRMLGRTLLPRTAMRKRRP 141
>gb|BG412065.1|BG412065 OV2_37_E12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 459
Score = 344 bits (746), Expect = 2e-093
Identities = 140/153 (91%), Positives = 149/153 (97%)
Frame = +2 / +1
Query: 641 APGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSL 820
A GDSPNTDGIHMGDSSGVTI NTVIGVGDDCISIGPGT+KVNITGVTCGPGHGISIGSL
Sbjct: 1 ARGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISIGSL 180
Query: 821 GRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIID 1000
GRYKDEKDVTDINVKDCTLKKT+NG+RIKAYEDAASVLTASKIHYENIKMEDS PIIID
Sbjct: 181 GRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYENIKMEDSSNPIIID 360
Query: 1001 MKYCPNKLCTANGASKVTVKDVTFKNITGTSST 1099
MKYCPNK+CTA+GASKVTVKDV+FKN+TGTS++
Sbjct: 361 MKYCPNKICTASGASKVTVKDVSFKNVTGTSAS 459
Score = 300 bits (650), Expect = 3e-080
Identities = 131/149 (87%), Positives = 135/149 (90%)
Frame = -2 / -2
Query: 1092 EVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASS 913
EVPV FLK TSLTVTLEAPLAV LLGQYFMSM+MG ESSIL+FS*WILEAVSTEAASS
Sbjct: 452 EVPVTFLKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASS 273
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
YAL+R PL VF SVQS TL+SVTSFSSLYRPRLPMLMPWPGP VTPVMFTL VPGPMEMQ
Sbjct: 272 YALIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQ 93
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSP 646
SSPTPMTV MVTPDESPMWMPSVLGLSP
Sbjct: 92 SSPTPMTVFSMVTPDESPMWMPSVLGLSP 6
Score = 134 bits (287), Expect(2) = 8e-033
Identities = 56/71 (78%), Positives = 62/71 (87%)
Frame = +1 / +3
Query: 823 AVQGREGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL*EYQDGGLGLPHHHRH 1002
AVQGREGRHG+QR+GL+A ED QR P QGV GRRLRAHRLQDPL*E+QDGGL PH+HRH
Sbjct: 183 AVQGREGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRH 362
Query: 1003 EVLPQQVMHRQ 1035
EVLP Q +HRQ
Sbjct: 363 EVLP*QNLHRQ 395
Score = 31.3 bits (62), Expect(2) = 8e-033
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / +3
Query: 646 RGQPQHGRHP 675
RGQPQHGRHP
Sbjct: 6 RGQPQHGRHP 35
>gb|CL149387.1|CL149387 104_330_10777794_114_31353_114 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10777794, DNA
sequence
Length = 711
Score = 231 bits (498), Expect(2) = 5e-091
Identities = 89/134 (66%), Positives = 108/134 (80%)
Frame = +2 / -2
Query: 626 DVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGI 805
DVN+TAPGD NTDG+H+G S+ V+ITN+ IG GDDCIS+GPG+ V + + CGPG GI
Sbjct: 710 DVNITAPGDVENTDGVHVGMSTKVSITNSTIGTGDDCISVGPGSDGVMVNNIICGPGQGI 531
Query: 806 SIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGY 985
SIG LGRYKDEKDVTD+ V+DC LKKT NGVRIK+YEDA SVLTAS + +ENI+ME+
Sbjct: 530 SIGCLGRYKDEKDVTDVTVRDCVLKKTTNGVRIKSYEDAESVLTASHLTFENIRMEEVAN 351
Query: 986 PIIIDMKYCPNKLC 1027
PIIID +CP K+C
Sbjct: 350 PIIIDQYFCPEKVC 309
Score = 177 bits (381), Expect(2) = 1e-060
Identities = 83/134 (61%), Positives = 93/134 (69%)
Frame = -2 / +1
Query: 1026 HNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISV 847
H GQ + SMMMG SSIL+FS +AVST++ASSY LMRTPL VFLS QS T+ SV
Sbjct: 310 HTFSGQKYWSMMMGFATSSILMFSKVRCDAVSTDSASSYDLMRTPLVVFLSTQSRTVTSV 489
Query: 846 TSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMP 667
TSFSSL RPR PMLMP PGPQ+ T +PGP EMQSSP PM LVM+T + P W P
Sbjct: 490 TSFSSL*RPRQPMLMPCPGPQMMLFTMTPSLPGPTEMQSSPVPMVELVMLTLVDIPTWTP 669
Query: 666 SVLGLSPGAVTLTS 625
SV SPGAV TS
Sbjct: 670 SVFSTSPGAVMFTS 711
Score = 126 bits (270), Expect(2) = 5e-091
Identities = 49/73 (67%), Positives = 63/73 (86%)
Frame = +2 / -2
Query: 1040 ASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNA 1219
+S V VKDVTF+NITGTSSTP+A++LLCS PC+GV++ DVN++Y+G NNKTMAVC NA
Sbjct: 290 SSHVIVKDVTFRNITGTSSTPQAISLLCSQSQPCSGVSLIDVNVEYAGKNNKTMAVCSNA 111
Query: 1220 KGSAKGCLKELAC 1258
KG+AKG ++ LAC
Sbjct: 110 KGTAKGSVEALAC 72
Score = 78.5 bits (165), Expect(2) = 1e-060
Identities = 38/76 (50%), Positives = 45/76 (59%)
Frame = -2 / +1
Query: 1260 KHASSLRQPLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVPV 1081
+HA + PLA+PLA LHTA TS TP+HG EQSRL A GV++VPV
Sbjct: 70 RHARASTLPLAVPLALLHTAMVLLFLPAYSTFTSMSDTPLHGCDCEQSRLMACGVDDVPV 249
Query: 1080 MFLKVTSLTVTLEAPL 1033
M VTSLT+T E L
Sbjct: 250 MLRNVTSLTMT*EESL 297
>gb|BH246023.1|BH246023 pSB1633.1 S. bicolor BTx623 PstI-digested total genomic DNA library
Sorghum bicolor genomic clone pSB1633 similar to PG gene
for polygalacturonase (X66422), DNA sequence
Length = 479
Score = 335 bits (726), Expect = 1e-090
Identities = 134/159 (84%), Positives = 147/159 (92%)
Frame = +2 / -1
Query: 665 DGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKD 844
DGIH+GDSS VTIT T IGVGDDCISIGPG++ +N+TGVTCGPGHGIS+GSLGRYKDEKD
Sbjct: 479 DGIHIGDSSKVTITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKD 300
Query: 845 VTDINVKDCTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKL 1024
VTDINVKDCTLKKT+NGVRIK+YEDAA V+TASK+HYENI M+D PIIIDMKYCPNK+
Sbjct: 299 VTDINVKDCTLKKTSNGVRIKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKI 120
Query: 1025 CTANGASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPC 1141
CTA G SKVTVKDVTFKNITGTSSTPEAV+LLCS KIPC
Sbjct: 119 CTAKGDSKVTVKDVTFKNITGTSSTPEAVSLLCSDKIPC 3
Score = 279 bits (603), Expect = 1e-073
Identities = 125/159 (78%), Positives = 135/159 (84%)
Frame = -2 / +1
Query: 1143 VHGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSIL 964
+ GIL+EQSRLTASGV+EVPVMFL VTSLTVTLE+PLAV LLGQYFMSMMMG SS+
Sbjct: 1 LQGILSEQSRLTASGVDEVPVMFLNVTSLTVTLESPLAVQILLGQYFMSMMMGLATSSMA 180
Query: 963 IFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQ 784
+FS*W LEAV T AASS L+RTPL VFLSVQSLTL+SVTSFSSLY PRLP LMPWPGPQ
Sbjct: 181 MFS*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQ 360
Query: 783 VTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMP 667
VTPV +PGPMEMQSSPTPM V VMVT +ESPMWMP
Sbjct: 361 VTPVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMP 477
Score = 100 bits (214), Expect(3) = 7e-025
Identities = 45/70 (64%), Positives = 50/70 (71%)
Frame = +1 / -3
Query: 826 VQGREGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL*EYQDGGLGLPHHHRHE 1005
VQG EG G+QRQGLHA ED Q RP Q + GRR+R H LQ PL E+ G G PHHHRHE
Sbjct: 318 VQG*EGCDGHQRQGLHAQEDQQWRPDQVLRGRRVRDHCLQAPLREHSHGRRGQPHHHRHE 139
Query: 1006 VLPQQVMHRQ 1035
VLPQQ +H Q
Sbjct: 138 VLPQQDLHCQ 109
Score = 30.4 bits (60), Expect(3) = 7e-025
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1 / -3
Query: 1099 PGGRQPALLCQDPM 1140
PGGRQPALL Q+P+
Sbjct: 45 PGGRQPALLRQNPL 4
Score = 22.6 bits (43), Expect(3) = 7e-025
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / -1
Query: 755 TSKVNITGVTCGPG 796
+SKV ITG T G G
Sbjct: 458 SSKVTITGTTIGVG 417
>gb|CF480188.1|CF480188 POL1_64_G01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_G01_A002 3', mRNA sequence
Length = 709
Score = 308 bits (667), Expect(3) = 5e-090
Identities = 126/152 (82%), Positives = 140/152 (92%)
Frame = +2 / +2
Query: 824 RYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDM 1003
R DEKDVTDINVKDCTLKKT+NG+RIKAYEDAASVLTASKIHYENIKMEDS PIIIDM
Sbjct: 47 READEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYENIKMEDSSNPIIIDM 226
Query: 1004 KYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSG 1183
KYCPNK+CTA+GASKVTVKDV+FK++TGTS++PEAV+LLCS KIPCTGVTMD+V ++YSG
Sbjct: 227 KYCPNKICTASGASKVTVKDVSFKDVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSG 406
Query: 1184 TNNKTMAVCKNAKGSAKGCLKELACF*NHHRP 1279
NNKTMAVC+NAKGSA GCLKELACF* P
Sbjct: 407 KNNKTMAVCQNAKGSATGCLKELACF*TSIHP 502
Score = 232 bits (500), Expect(2) = 5e-068
Identities = 113/149 (75%), Positives = 120/149 (80%)
Frame = -2 / -2
Query: 1263 *KHASSLRQPLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVP 1084
*KHASSLRQP+ALPLAF HTA LT SMVTPV GIL+EQSRLTASG+ EVP
Sbjct: 486 *KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVP 307
Query: 1083 VMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYAL 904
V LK TSLTVTLEAPLAV LLGQYFMSM+MG ESSIL+FS*WILEAVSTEAASSYAL
Sbjct: 306 VTSLKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYAL 127
Query: 903 MRTPLAVFLSVQSLTLISVTSFSSLYRPR 817
+R PL VF SVQS TL+SVTSFSS R R
Sbjct: 126 IRRPLLVFFSVQSFTLMSVTSFSSASRCR 40
Score = 125 bits (268), Expect(4) = 3e-047
Identities = 52/67 (77%), Positives = 58/67 (86%)
Frame = +1 / +1
Query: 835 REGRHGYQRQGLHA*EDGQRRPHQGV*GRRLRAHRLQDPL*EYQDGGLGLPHHHRHEVLP 1014
REGRHG+QR+GL+A ED QR P QGV GRRLRAHRLQDPL*E+QDGGL PH+HRHEVLP
Sbjct: 58 REGRHGHQREGLYAEEDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRHEVLP 237
Query: 1015 QQVMHRQ 1035
Q +HRQ
Sbjct: 238 *QNLHRQ 258
Score = 69.3 bits (145), Expect(3) = 9e-027
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = -1 / -1
Query: 1018 VGAVLHVDDDGVARVLHLDILIVDLXXXXXXXGVLIRLDADAVGRLLK 875
V AVLHVDD+GV RVLHLD+LIVDL GVL+RLD +AV RLL+
Sbjct: 241 VRAVLHVDDNGVRRVLHLDVLIVDLGGGEHGGGVLVRLDPEAVARLLQ 98
Score = 61.1 bits (127), Expect(3) = 9e-027
Identities = 29/50 (58%), Positives = 30/50 (60%)
Frame = -1 / -1
Query: 1264 LEACELLEATLGAALSVLAYGHXXXXXXXXXXXXXVHGDAGAWDLGRAEQ 1115
LEACELLEA GAAL VLAYGH +HGDA A DL AEQ
Sbjct: 487 LEACELLEAACGAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAEQ 338
Score = 52.4 bits (108), Expect(2) = 5e-068
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = -2 / -1
Query: 258 IVCFPVPPHADAHASCTAFV 199
+VCFPVPPHAD HASCTAFV
Sbjct: 61 LVCFPVPPHADVHASCTAFV 2
Score = 52.4 bits (108), Expect(4) = 3e-047
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3 / +3
Query: 1194 RPWPYARTLRAAPRVASRSSHASR 1265
RPWPYA+T RAAP+ ASRSSHASR
Sbjct: 417 RPWPYAKTPRAAPQAASRSSHASR 488
Score = 47.8 bits (98), Expect(3) = 5e-090
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +3
Query: 200 TKAVQEAWASACGGTGKQT 256
TKAVQEAW SACGGTGKQT
Sbjct: 3 TKAVQEAWTSACGGTGKQT 59
Score = 47.3 bits (97), Expect(4) = 3e-047
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1 / +2
Query: 199 HEGCAGGVGIGVRRHREADD 258
HEGCAGG+ +GVRRHREAD+
Sbjct: 2 HEGCAGGMDVGVRRHREADE 61
Score = 35.4 bits (71), Expect(3) = 9e-027
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3 / -2
Query: 242 CRRTPMPTPPAQPSC 198
CRRTP PPAQPSC
Sbjct: 45 CRRTPTSMPPAQPSC 1
Score = 29.0 bits (57), Expect(4) = 3e-047
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1 / +1
Query: 1099 PGGRQPALLCQDPM 1140
P GRQPALL QDP+
Sbjct: 322 PRGRQPALLRQDPL 363
Score = 22.6 bits (43), Expect(3) = 5e-090
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1 / +3
Query: 1267 PPSTHLSSYTMCLVV 1311
PPSTHL+ Y + +V
Sbjct: 489 PPSTHLALYLVISLV 533
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,659,735,140
Number of Sequences: 832831
Number of extensions: 26094643
Number of successful extensions: 225883
Number of sequences better than 1.0e-020: 191
length of database: 163,786,556
effective HSP length: 56
effective length of database: 117,148,020
effective search space used: 53419497120
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)