TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2619423.2.1
(886 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN133080.1|CN133080 OX1_10_B10.b1_A002 Oxidatively-stres... 441 e-126
gb|CX617349.1|CX617349 GABR1_33_E12.b1_A002 GA- or brassino... 332 e-108
gb|CX610190.1|CX610190 ANR1_17_E01.b1_A002 Anaerobic roots ... 290 8e-097
gb|CD228356.1|CD228356 CCC1_7_A01.b1_A007 Callus culture/ce... 341 1e-096
gb|CX619836.1|CX619836 GABR1_48_D10.b1_A002 GA- or brassino... 285 2e-095
gb|CD231568.1|CD231568 SS1_22_H03.b1_A012 Salt-stressed see... 221 3e-076
gb|BG357389.1|BG357389 OV2_29_C07.g1_A002 Ovary 2 (OV2) Sor... 282 6e-075
gb|CD224939.1|CD224939 CCC1_37_A04.b1_A007 Callus culture/c... 256 3e-067
gb|BG103087.1|BG103087 RHIZ2_18_A04.g1_A003 Rhizome2 (RHIZ2... 233 3e-060
gb|CN130722.1|CN130722 RHOH1_43_H02.b1_A002 Acid- and alkal... 139 3e-052
gb|CD220761.1|CD220761 CCC1_69_C10.b1_A007 Callus culture/c... 139 3e-052
gb|BE355906.1|BE355906 DG1_11_D11.g1_A002 Dark Grown 1 (DG1... 203 4e-051
gb|BG051515.1|BG051515 FM1_57_E01.g1_A003 Floral-Induced Me... 187 2e-046
gb|BG102542.1|BG102542 RHIZ2_34_D03.g1_A003 Rhizome2 (RHIZ2... 183 3e-045
gb|BE355598.1|BE355598 DG1_115_H07.g1_A002 Dark Grown 1 (DG... 181 2e-044
gb|AW285351.1|AW285351 LG1_244_C06.g1_A002 Light Grown 1 (L... 178 8e-044
gb|BZ332129.1|BZ332129 hx25e11.g1 WGS-SbicolorF (JM107 adap... 147 2e-034
gb|CL155605.1|CL155605 104_341_10782265_114_31471_361 Sorgh... 84 1e-033
gb|CW022568.1|CW022568 104_162_10431922_1_30008 Sorghum met... 93 4e-031
gb|CD429838.1|CD429838 ETH1_15_D11.g1_A002 Ethylene-treated... 93 3e-030
gb|CX615617.1|CX615617 GABR1_21_E12.b1_A002 GA- or brassino... 93 2e-028
gb|BG558694.1|BG558694 RHIZ2_59_C03.g1_A003 Rhizome2 (RHIZ2... 46 7e-027
gb|CW099235.1|CW099235 104_466_11003441_116_34380_077 Sorgh... 79 9e-027
gb|CW262600.1|CW262600 104_730_11230165_148_35221_059 Sorgh... 88 5e-025
gb|CW171357.1|CW171357 104_582_11155697_148_36526_077 Sorgh... 88 5e-025
gb|CW184126.1|CW184126 104_600_11164986_148_36687_075 Sorgh... 72 5e-025
gb|CW315428.1|CW315428 104_806_11472354_116_35824_071 Sorgh... 88 5e-025
gb|CX610855.1|CX610855 ANR1_21_E10.b1_A002 Anaerobic roots ... 75 2e-024
gb|CX610480.1|CX610480 ANR1_19_B02.b1_A002 Anaerobic roots ... 75 5e-024
gb|CN127986.1|CN127986 RHOH1_26_G01.b1_A002 Acid- and alkal... 75 5e-024
gb|CX616799.1|CX616799 GABR1_30_B03.b1_A002 GA- or brassino... 75 5e-024
gb|CX607149.1|CX607149 ANR1_7_A11.b1_A002 Anaerobic roots S... 75 5e-024
gb|CX609879.1|CX609879 ANR1_15_G02.b1_A002 Anaerobic roots ... 75 5e-024
gb|CW083259.1|CW083259 104_425_10944176_116_32357_024 Sorgh... 85 6e-024
gb|CW034021.1|CW034021 104_263_10502300_114_30359 Sorghum m... 73 1e-023
gb|CW502316.1|CW502316 fsbb001f298j11k0 Sorghum methylation... 68 1e-023
gb|CW087130.1|CW087130 104_431_10947425_114_33024_071 Sorgh... 85 2e-023
gb|CX606141.1|CX606141 ANR1_1_H04.b1_A002 Anaerobic roots S... 70 1e-022
gb|CX607227.1|CX607227 ANR1_7_H10.b1_A002 Anaerobic roots S... 69 3e-022
gb|CN151897.1|CN151897 WOUND1_78_H11.b1_A002 Wounded leaves... 68 4e-022
gb|CW054283.1|CW054283 104_294_10516424_115_30183 Sorghum m... 82 4e-022
gb|CX615267.1|CX615267 GABR1_19_D03.b1_A002 GA- or brassino... 67 9e-022
gb|CN130798.1|CN130798 RHOH1_43_H02.g1_A002 Acid- and alkal... 105 1e-021
gb|CW159475.1|CW159475 104_565_11149377_148_36408_037 Sorgh... 89 3e-021
>gb|CN133080.1|CN133080 OX1_10_B10.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_10_B10_A002 3', mRNA sequence
Length = 679
Score = 441 bits (957), Expect(2) = e-126
Identities = 183/187 (97%), Positives = 183/187 (97%)
Frame = +2 / +2
Query: 2 APRFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATP 181
APRFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQ LQPPLPDGYFGNVIFTATP
Sbjct: 29 APRFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQRLQPPLPDGYFGNVIFTATP 208
Query: 182 LAEAGKVTSELAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGL 361
LAEAGKVTS LAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGL
Sbjct: 209 LAEAGKVTSGLAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGL 388
Query: 362 TSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRK 541
TSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRK
Sbjct: 389 TSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRK 568
Query: 542 LIGEA*T 562
LI E *T
Sbjct: 569 LICEV*T 589
Score = 377 bits (817), Expect(2) = e-107
Identities = 163/188 (86%), Positives = 166/188 (88%)
Frame = -2 / -2
Query: 564 TV*ASPISFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASW 385
+V* S ISFRNFSMCSAC EIAMDRLPSPFALGRTNARPSYA+PPGPMNTGRPHPKSASW
Sbjct: 591 SV*TSQISFRNFSMCSACKEIAMDRLPSPFALGRTNARPSYAIPPGPMNTGRPHPKSASW 412
Query: 384 IGRRTQLVSPRFGQRKVCAPXXXXXXXXXXXXXSNAERQ*SLSILSSAPWMTAAPSASSL 205
IGRRTQLVSPRFG RKVCAP S+AERQ*SLSILSSAPWMTAAPSAS L
Sbjct: 411 IGRRTQLVSPRFGHRKVCAPRTSADKSGCSSR*SSAERQ*SLSILSSAPWMTAAPSASPL 232
Query: 204 VTLPASASGVAVKMTLPKYPSGSGGCSV*RPSVAQYNLVGCSGGRLRARETHFQTCAAST 25
VTLPASASGVAVKMTLPK PSGSGGCS RPSVAQYNLVGCSGGRLRARETHFQTCAA T
Sbjct: 231 VTLPASASGVAVKMTLPK*PSGSGGCSRWRPSVAQYNLVGCSGGRLRARETHFQTCAART 52
Query: 24 AYVLNRGA 1
AYVLNRGA
Sbjct: 51 AYVLNRGA 28
Score = 376 bits (816), Expect(2) = e-106
Identities = 152/187 (81%), Positives = 159/187 (85%)
Frame = +1 / +1
Query: 1 CTPVQHICSASGTCLEMCLPCTQPTS*TTHQVVLRH*WPSNATASTTRWVLWQCHLHRDT 180
CTPVQHI S+S TCLEMCLPCTQPTS*TTHQVVLRH*W ATASTTRW+LW CHLH DT
Sbjct: 28 CTPVQHIRSSSSTCLEMCLPCTQPTS*TTHQVVLRH*WAPTATASTTRWLLW*CHLHCDT 207
Query: 181 TCXXXXXXXXXXRRSSSHPGSTG*DGQRLLPLSVRLPGASTGSVSTCAWSAYLPLPEPRA 360
TC RRSSSHPGSTG*DGQRLLPLS LPGA+TG VST AWS YLP+PEPRA
Sbjct: 208 TC*GGQGDQWAGRRSSSHPGSTG*DGQRLLPLSAGLPGAATGFVSTGAWSTYLPVPEPRA 387
Query: 361 HQLGAPSYP*C*LRMGPACVHGARWHCV*RSGVCPPKCKWRRQPVHCYLVAG*AHGEVPE 540
HQLG PSYP*C LRMGP+CVHGAR +C+*RSGVCPPKCKWR QPVHCYL AG*AHGEVPE
Sbjct: 388 HQLGTPSYP*CRLRMGPSCVHGARRYCI*RSGVCPPKCKWRWQPVHCYLFAG*AHGEVPE 567
Query: 541 ANRRSLN 561
AN RSLN
Sbjct: 568 ANLRSLN 588
Score = 371 bits (805), Expect(2) = e-103
Identities = 153/186 (82%), Positives = 161/186 (86%)
Frame = -1 / -1
Query: 559 LSFAD*LPELLHVLSLQRDSNGQAAVAICTWEDKRQTFIRNATWPHEHRPAPSEVSIMDR 380
L+FAD*LPELLHVLSLQRDSNGQAA++ICTWEDKRQTFI N WPHEHR APSEV IMDR
Sbjct: 586 LNFAD*LPELLHVLSLQRDSNGQAAISICTWEDKRQTFICNTAWPHEHRTAPSEVGIMDR 407
Query: 379 KAHPAGEP*VRAAEGMRSTHKC*QIRLKLQXXXXXXXXXXVHPIQCSLDDCCSFCQLTGH 200
KA+PAGEP*VRA EGM STH+C*QIRL+LQ VHPIQCSLDDCCSFCQ TGH
Sbjct: 406 KAYPAGEP*VRAPEGMCSTHQC*QIRLQLQVVQR*AAVVVVHPIQCSLDDCCSFCQPTGH 227
Query: 199 LARLSKWCRGEDDIAKVPIW*WRL*RLTAISGAIQLGGLFRR*AACKGDTFPDMCR*HCI 20
LARLSKWCR EDDI KV IW*WRL* L ISGAIQLGGLFRR*AACKGDTFPDMC *+C+
Sbjct: 226 LARLSKWCRSEDDITKVTIW*WRL*PLAPISGAIQLGGLFRR*AACKGDTFPDMCC*NCV 47
Query: 19 CAEPGC 2
CAEPGC
Sbjct: 46 CAEPGC 29
Score = 323 bits (700), Expect = 2e-087
Identities = 137/187 (73%), Positives = 139/187 (74%)
Frame = +3 / +3
Query: 3 HPGSAHMQC*RHMSGNVSPLHAAYLLNNPPSCIAPLMAVKRYSLHYQMGTLAMSXXXXXX 182
HPGSAH Q *+HMSGNVSPLHAAYLLNNPPSCIAPLM YSLHYQM TL MS
Sbjct: 30 HPGSAHTQF*QHMSGNVSPLHAAYLLNNPPSCIAPLMGANGYSLHYQMVTLVMSSSLRHH 209
Query: 183 XXXXXXXXVSWQKEQQSSREHWIGWXXXXXXXXXXXWSFNRICQHLCVERIPSAART*GS 362
V WQKEQQSSREHWIGW WS NRICQH CVE IPS ART*GS
Sbjct: 210 LLRRAR*PVGWQKEQQSSREHWIGWTTTTAAQRWTTWSCNRICQHWCVEHIPSGART*GS 389
Query: 363 PAGCAFLSMMLTSDGAGLCSWGQVALRMKVWRLSSQVQMATAACPLLSRCRLSTWRSSGS 542
PAG AFLSMM TSDGA LCSWGQ L MKVWRLSSQVQM AACPLLS CRLSTWRSSGS
Sbjct: 390 PAGYAFLSMMPTSDGAVLCSWGQAVLHMKVWRLSSQVQMEMAACPLLSLCRLSTWRSSGS 569
Query: 543 *SAKLKR 563
*SAK K+
Sbjct: 570 *SAKFKQ 590
Score = 214 bits (462), Expect(2) = 3e-094
Identities = 88/104 (84%), Positives = 91/104 (87%)
Frame = -3 / -3
Query: 560 FKLRRLASGTSPCAQPATR*QWTGCRRHLHLGGQTPDLHTQCHLAP*TQAGPIRSQHHG* 381
FKLRRLASGTSPCAQPA R*QWTGC HLHLGGQTPDLH Q LAP*TQ GPIRS+HHG*
Sbjct: 587 FKLRRLASGTSPCAQPAKR*QWTGCHLHLHLGGQTPDLHMQYRLAP*TQDGPIRSRHHG* 408
Query: 380 EGAPSW*ALGSGSGRYALHAQVLTDPVEAPGSLTLSGSSRCPSY 249
EG PSW*ALGSG+GRY LHA VLT+PV APGS LSGSSRCPSY
Sbjct: 407 EGVPSW*ALGSGTGRYVLHAPVLTNPVAAPGSPALSGSSRCPSY 276
Score = 153 bits (328), Expect(2) = 3e-094
Identities = 61/70 (87%), Positives = 62/70 (88%)
Frame = -3 / -3
Query: 212 AHWSPCPPQQVVSR*R*HCQSTHLVVEAVAFDGHQWRNTTWWVVQEVGCVQGRHISRHVP 33
AHWSPCPPQQVVS+*R*H QS HLVVEAVA HQWRNTTWWVVQEVGCVQGRHISRHV
Sbjct: 239 AHWSPCPPQQVVSQ*R*HYQSNHLVVEAVAVGAHQWRNTTWWVVQEVGCVQGRHISRHVL 60
Query: 32 LALHMC*TGV 3
L L MC*TGV
Sbjct: 59 LELRMC*TGV 30
Score = 34.5 bits (69), Expect(2) = e-126
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +1
Query: 560 TVPTVEGGCYWARRIMLCPNS 622
+ PT+EG CY AR ML PNS
Sbjct: 595 SAPTIEGWCYRARGFMLYPNS 657
Score = 33.1 bits (66), Expect(2) = e-107
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1 / -2
Query: 637 SVFYLRIWAEHNPSRPITSSFNS 569
S+ RIW +H S PIT SFNS
Sbjct: 672 SILSGRIWVQHKASCPITPSFNS 604
Score = 30.4 bits (60), Expect(2) = e-106
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3 / +2
Query: 567 QLLKEDVIGREGLCSAQIL 623
+LLK+ VIG+E LC QIL
Sbjct: 602 RLLKDGVIGQEALCCTQIL 658
Score = 26.7 bits (52), Expect(2) = e-103
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2 / -3
Query: 633 YFI*EFGQSIILLAQ*HPPSTVG 565
+++ EFG +I LA *H PS VG
Sbjct: 668 FYLGEFGYNIKPLAL*HHPSIVG 600
>gb|CX617349.1|CX617349 GABR1_33_E12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_33_E12_A002 3', mRNA sequence
Length = 790
Score = 332 bits (719), Expect(6) = e-108
Identities = 139/142 (97%), Positives = 139/142 (97%)
Frame = +2 / +2
Query: 137 LPDGYFGNVIFTATPLAEAGKVTSELAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSA 316
LPDGYFGNVIFTATPLAEAGKVTS LAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSA
Sbjct: 2 LPDGYFGNVIFTATPLAEAGKVTSGLAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSA 181
Query: 317 LVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLS 496
LVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLS
Sbjct: 182 LVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLS 361
Query: 497 IAISLQAEHMEKFRKLIGEA*T 562
IAISLQAEHMEKFRKLI E *T
Sbjct: 362 IAISLQAEHMEKFRKLICEV*T 427
Score = 281 bits (609), Expect(5) = 2e-088
Identities = 113/142 (79%), Positives = 119/142 (83%)
Frame = +1 / +1
Query: 136 TTRWVLWQCHLHRDTTCXXXXXXXXXXRRSSSHPGSTG*DGQRLLPLSVRLPGASTGSVS 315
TTRW+LW CHLH DTTC RRSSSHPGSTG*DGQRLLPLS LPGA+TG VS
Sbjct: 1 TTRWLLW*CHLHCDTTC*GGQGDQWAGRRSSSHPGSTG*DGQRLLPLSAGLPGAATGFVS 180
Query: 316 TCAWSAYLPLPEPRAHQLGAPSYP*C*LRMGPACVHGARWHCV*RSGVCPPKCKWRRQPV 495
T AWS YLP+PEPRAHQLG PSYP*C LRMGP+CVHGAR +C+*RSGVCPPKCKWR QPV
Sbjct: 181 TGAWSTYLPVPEPRAHQLGTPSYP*CRLRMGPSCVHGARRYCI*RSGVCPPKCKWRWQPV 360
Query: 496 HCYLVAG*AHGEVPEANRRSLN 561
HCYL AG*AHGEVPEAN RSLN
Sbjct: 361 HCYLFAG*AHGEVPEANLRSLN 426
Score = 277 bits (600), Expect(6) = 1e-092
Identities = 121/143 (84%), Positives = 124/143 (86%)
Frame = -2 / -2
Query: 564 TV*ASPISFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASW 385
+V* S ISFRNFSMCSAC EIAMDRLPSPFALGRTNARPSYA+PPGPMNTGRPHPKSASW
Sbjct: 429 SV*TSQISFRNFSMCSACKEIAMDRLPSPFALGRTNARPSYAIPPGPMNTGRPHPKSASW 250
Query: 384 IGRRTQLVSPRFGQRKVCAPXXXXXXXXXXXXXSNAERQ*SLSILSSAPWMTAAPSASSL 205
IGRRTQLVSPRFG RKVCAP S+AERQ*SLSILSSAPWMTAAPSAS L
Sbjct: 249 IGRRTQLVSPRFGHRKVCAPRTSADKSGCSSR*SSAERQ*SLSILSSAPWMTAAPSASPL 70
Query: 204 VTLPASASGVAVKMTLPKYPSGS 136
VTLPASASGVAVKMTLPK PSGS
Sbjct: 69 VTLPASASGVAVKMTLPK*PSGS 1
Score = 275 bits (596), Expect(4) = 4e-083
Identities = 114/141 (80%), Positives = 120/141 (85%)
Frame = -1 / -1
Query: 559 LSFAD*LPELLHVLSLQRDSNGQAAVAICTWEDKRQTFIRNATWPHEHRPAPSEVSIMDR 380
L+FAD*LPELLHVLSLQRDSNGQAA++ICTWEDKRQTFI N WPHEHR APSEV IMDR
Sbjct: 424 LNFAD*LPELLHVLSLQRDSNGQAAISICTWEDKRQTFICNTAWPHEHRTAPSEVGIMDR 245
Query: 379 KAHPAGEP*VRAAEGMRSTHKC*QIRLKLQXXXXXXXXXXVHPIQCSLDDCCSFCQLTGH 200
KA+PAGEP*VRA EGM STH+C*QIRL+LQ VHPIQCSLDDCCSFCQ TGH
Sbjct: 244 KAYPAGEP*VRAPEGMCSTHQC*QIRLQLQVVQR*AAVVVVHPIQCSLDDCCSFCQPTGH 65
Query: 199 LARLSKWCRGEDDIAKVPIW* 137
LARLSKWCR EDDI KV IW*
Sbjct: 64 LARLSKWCRSEDDITKVTIW* 2
Score = 230 bits (496), Expect(2) = 9e-066
Identities = 99/142 (69%), Positives = 100/142 (70%)
Frame = +3 / +3
Query: 138 YQMGTLAMSXXXXXXXXXXXXXXVSWQKEQQSSREHWIGWXXXXXXXXXXXWSFNRICQH 317
YQM TL MS V WQKEQQSSREHWIGW WS NRICQH
Sbjct: 3 YQMVTLVMSSSLRHHLLRRAR*PVGWQKEQQSSREHWIGWTTTTAAQRWTTWSCNRICQH 182
Query: 318 LCVERIPSAART*GSPAGCAFLSMMLTSDGAGLCSWGQVALRMKVWRLSSQVQMATAACP 497
CVE IPS ART*GSPAG AFLSMM TSDGA LCSWGQ L MKVWRLSSQVQM AACP
Sbjct: 183 WCVEHIPSGART*GSPAGYAFLSMMPTSDGAVLCSWGQAVLHMKVWRLSSQVQMEMAACP 362
Query: 498 LLSRCRLSTWRSSGS*SAKLKR 563
LLS CRLSTWRSSGS*SAK K+
Sbjct: 363 LLSLCRLSTWRSSGS*SAKFKQ 428
Score = 214 bits (462), Expect(4) = 4e-072
Identities = 88/104 (84%), Positives = 91/104 (87%)
Frame = -3 / -3
Query: 560 FKLRRLASGTSPCAQPATR*QWTGCRRHLHLGGQTPDLHTQCHLAP*TQAGPIRSQHHG* 381
FKLRRLASGTSPCAQPA R*QWTGC HLHLGGQTPDLH Q LAP*TQ GPIRS+HHG*
Sbjct: 425 FKLRRLASGTSPCAQPAKR*QWTGCHLHLHLGGQTPDLHMQYRLAP*TQDGPIRSRHHG* 246
Query: 380 EGAPSW*ALGSGSGRYALHAQVLTDPVEAPGSLTLSGSSRCPSY 249
EG PSW*ALGSG+GRY LHA VLT+PV APGS LSGSSRCPSY
Sbjct: 245 EGVPSW*ALGSGTGRYVLHAPVLTNPVAAPGSPALSGSSRCPSY 114
Score = 57.0 bits (118), Expect(4) = 4e-072
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = -3 / -3
Query: 212 AHWSPCPPQQVVSR*R*HCQSTHLV 138
AHWSPCPPQQVVS+*R*H QS HLV
Sbjct: 77 AHWSPCPPQQVVSQ*R*HYQSNHLV 3
Score = 46.4 bits (95), Expect(6) = e-108
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +3
Query: 620 SQIKY*SFK*TQWLHFHF 673
SQIKY*SFK*TQWLHFHF
Sbjct: 495 SQIKY*SFK*TQWLHFHF 548
Score = 44.6 bits (91), Expect(6) = 1e-092
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -2 / -1
Query: 672 K*KCSHWVHLKLQYFI*E 619
K*KCSHWVHLKLQYFI E
Sbjct: 547 K*KCSHWVHLKLQYFIWE 494
Score = 42.3 bits (86), Expect(2) = 9e-066
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3 / +1
Query: 624 R*NTEVSSEPSGCTFTLKTCRGNSWSLHF 710
R*NTEVSSEPSGCTFT + + + +F
Sbjct: 499 R*NTEVSSEPSGCTFTFEDLQSKFMATYF 585
Score = 40.9 bits (83), Expect(4) = 4e-083
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -1 / -3
Query: 673 KVKVQPLGSLETSVFYL 623
KVKVQPLGSLETSVFYL
Sbjct: 548 KVKVQPLGSLETSVFYL 498
Score = 37.7 bits (76), Expect(5) = 2e-088
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1 / +2
Query: 625 DKILKFQVNPVAALSL 672
DKILKFQVNPVAALSL
Sbjct: 500 DKILKFQVNPVAALSL 547
Score = 36.3 bits (73), Expect(4) = 4e-072
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -3 / -2
Query: 674 QSESAATGFT*NFSILS 624
+SESAATGFT*NFSILS
Sbjct: 549 KSESAATGFT*NFSILS 499
Score = 32.7 bits (65), Expect(6) = 1e-092
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1 / -1
Query: 799 RACYWSLFLTMIFYYVSSYNFYPF 728
R CYWSLFLTM F PF
Sbjct: 745 RVCYWSLFLTMSFTMFLHRKCLPF 674
Score = 32.2 bits (64), Expect(6) = 1e-092
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / -2
Query: 637 SVFYLRIWAEHNPSRPITSSFNS 569
S+ RIW H S PIT SFNS
Sbjct: 510 SILSGRIWVRHKASCPITPSFNS 442
Score = 31.8 bits (63), Expect(6) = e-108
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2 / +1
Query: 665 FHFEDLQRKFMVTSFC 712
F FEDLQ KFM T FC
Sbjct: 541 FTFEDLQSKFMATYFC 588
Score = 31.8 bits (63), Expect(6) = e-108
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +1
Query: 560 TVPTVEGGCYWARRIMLCPNS 622
+ PT+EG CY AR M PNS
Sbjct: 433 SAPTIEGWCYRARGFMSYPNS 495
Score = 30.4 bits (60), Expect(5) = 2e-088
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3 / +2
Query: 651 PSGCTFTLKTCRGNSWSLHFVRL 719
P LKTCR NSW L FV L
Sbjct: 527 PVAALSLLKTCRVNSWPLTFVPL 595
Score = 30.4 bits (60), Expect(5) = 2e-088
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3 / +2
Query: 567 QLLKEDVIGREGLCSAQIL 623
+LLK+ VIG+E LC QIL
Sbjct: 440 RLLKDGVIGQEALCRTQIL 496
Score = 26.3 bits (51), Expect(4) = 4e-083
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2 / -3
Query: 633 YFI*EFGQSIILLAQ*HPPSTVG 565
+++ EFG I LA *H PS VG
Sbjct: 506 FYLGEFGYDIKPLAL*HHPSIVG 438
Score = 26.3 bits (51), Expect(6) = 1e-092
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 712 TK*SDHEFPLQVFK 671
TK S HEF LQVFK
Sbjct: 588 TKVSGHEFTLQVFK 547
Score = 24.9 bits (48), Expect(4) = 4e-083
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2 / -3
Query: 711 QNEVTMNFLCKSSK*K 664
Q V MN LCKSSK K
Sbjct: 587 QK*VAMNLLCKSSKVK 540
Score = 24.4 bits (47), Expect(6) = e-108
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +2
Query: 761 KNHC*EQTPIAGS 799
K HC EQ PIA S
Sbjct: 707 KTHCKEQAPIANS 745
Score = 24.0 bits (46), Expect(5) = 2e-088
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 762 KIIVRNKLQ*Q 794
K+IVRNKLQ*Q
Sbjct: 708 KLIVRNKLQ*Q 740
Score = 23.1 bits (44), Expect(4) = 4e-072
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / -1
Query: 713 HKMK*P*ISSASLQ 672
HK K P*I SASLQ
Sbjct: 589 HKSKWP*IYSASLQ 548
Score = 22.6 bits (43), Expect(6) = e-108
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2 / +1
Query: 713 EINYRERVEI 742
+INYRERV+I
Sbjct: 658 KINYRERVDI 687
Score = 22.6 bits (43), Expect(6) = 1e-092
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1 / -2
Query: 742 NFYPFSIINLT 710
N YPFSII+L+
Sbjct: 687 NVYPFSIIDLS 655
>gb|CX610190.1|CX610190 ANR1_17_E01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_17_E01_A002 3', mRNA sequence
Length = 726
Score = 290 bits (628), Expect(6) = 8e-097
Identities = 122/125 (97%), Positives = 122/125 (97%)
Frame = +2 / +1
Query: 188 EAGKVTSELAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTS 367
EAGKVTS LAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTS
Sbjct: 1 EAGKVTSGLAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTS 180
Query: 368 WVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLI 547
WVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLI
Sbjct: 181 WVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLI 360
Query: 548 GEA*T 562
E *T
Sbjct: 361 CEV*T 375
Score = 247 bits (533), Expect(5) = 3e-078
Identities = 99/115 (86%), Positives = 104/115 (90%)
Frame = +1 / +3
Query: 217 RRSSSHPGSTG*DGQRLLPLSVRLPGASTGSVSTCAWSAYLPLPEPRAHQLGAPSYP*C* 396
RRSSSHPGSTG*DGQRLLPLS LPGA+TG VST AWS YLP+PEPRAHQLG PSYP*C
Sbjct: 30 RRSSSHPGSTG*DGQRLLPLSAGLPGAATGFVSTGAWSTYLPVPEPRAHQLGTPSYP*CR 209
Query: 397 LRMGPACVHGARWHCV*RSGVCPPKCKWRRQPVHCYLVAG*AHGEVPEANRRSLN 561
LRMGP+CVHGAR +C+*RSGVCPPKCKWR QPVHCYL AG*AHGEVPEAN RSLN
Sbjct: 210 LRMGPSCVHGARRYCI*RSGVCPPKCKWRWQPVHCYLFAG*AHGEVPEANLRSLN 374
Score = 242 bits (522), Expect(6) = 2e-082
Identities = 104/125 (83%), Positives = 107/125 (85%)
Frame = -2 / -2
Query: 564 TV*ASPISFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASW 385
+V* S ISFRNFSMCSAC EIAMDRLPSPFALGRTNARPSYA+PPGPMNTGRPHPKSASW
Sbjct: 377 SV*TSQISFRNFSMCSACKEIAMDRLPSPFALGRTNARPSYAIPPGPMNTGRPHPKSASW 198
Query: 384 IGRRTQLVSPRFGQRKVCAPXXXXXXXXXXXXXSNAERQ*SLSILSSAPWMTAAPSASSL 205
IGRRTQLVSPRFG RKVCAP S+AERQ*SLSILSSAPWMTAAPSAS L
Sbjct: 197 IGRRTQLVSPRFGHRKVCAPRTSADKSGCSSR*SSAERQ*SLSILSSAPWMTAAPSASPL 18
Query: 204 VTLPA 190
VTLPA
Sbjct: 17 VTLPA 3
Score = 237 bits (512), Expect(4) = 7e-072
Identities = 99/124 (79%), Positives = 106/124 (85%)
Frame = -1 / -1
Query: 559 LSFAD*LPELLHVLSLQRDSNGQAAVAICTWEDKRQTFIRNATWPHEHRPAPSEVSIMDR 380
L+FA+*LPELLHVLSLQRDSNGQAA++ICTWEDKRQTFI N WPHEHR APSEV IMDR
Sbjct: 372 LNFAN*LPELLHVLSLQRDSNGQAAISICTWEDKRQTFICNTAWPHEHRTAPSEVGIMDR 193
Query: 379 KAHPAGEP*VRAAEGMRSTHKC*QIRLKLQXXXXXXXXXXVHPIQCSLDDCCSFCQLTGH 200
KA+PAGEP*VRA EGM STH+C*QIRL+LQ VHPIQCSLDDCCSFCQ TGH
Sbjct: 192 KAYPAGEP*VRAPEGMCSTHQC*QIRLQLQVVQR*AAVVVVHPIQCSLDDCCSFCQPTGH 13
Query: 199 LARL 188
LARL
Sbjct: 12 LARL 1
Score = 219 bits (473), Expect(2) = 1e-062
Identities = 91/119 (76%), Positives = 92/119 (77%)
Frame = +3 / +2
Query: 207 VSWQKEQQSSREHWIGWXXXXXXXXXXXWSFNRICQHLCVERIPSAART*GSPAGCAFLS 386
V WQKEQQSSREHWIGW WS NRICQH CVE IPS ART*GSPAG AFLS
Sbjct: 20 VGWQKEQQSSREHWIGWTTTTAAQRWTTWSCNRICQHWCVEHIPSGART*GSPAGYAFLS 199
Query: 387 MMLTSDGAGLCSWGQVALRMKVWRLSSQVQMATAACPLLSRCRLSTWRSSGS*SAKLKR 563
MM TSDGA LCSWGQ L MKVWRLSSQVQM AACPLLS CRLSTWRSSGS* AK K+
Sbjct: 200 MMPTSDGAVLCSWGQAVLHMKVWRLSSQVQMEMAACPLLSLCRLSTWRSSGS*FAKFKQ 376
Score = 213 bits (459), Expect(4) = 2e-063
Identities = 87/104 (83%), Positives = 91/104 (87%)
Frame = -3 / -3
Query: 560 FKLRRLASGTSPCAQPATR*QWTGCRRHLHLGGQTPDLHTQCHLAP*TQAGPIRSQHHG* 381
FKLR+LASGTSPCAQPA R*QWTGC HLHLGGQTPDLH Q LAP*TQ GPIRS+HHG*
Sbjct: 373 FKLRKLASGTSPCAQPAKR*QWTGCHLHLHLGGQTPDLHMQYRLAP*TQDGPIRSRHHG* 194
Query: 380 EGAPSW*ALGSGSGRYALHAQVLTDPVEAPGSLTLSGSSRCPSY 249
EG PSW*ALGSG+GRY LHA VLT+PV APGS LSGSSRCPSY
Sbjct: 193 EGVPSW*ALGSGTGRYVLHAPVLTNPVAAPGSPALSGSSRCPSY 62
Score = 46.4 bits (95), Expect(6) = 8e-097
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +2
Query: 620 SQIKY*SFK*TQWLHFHF 673
SQIKY*SFK*TQWLHFHF
Sbjct: 443 SQIKY*SFK*TQWLHFHF 496
Score = 44.6 bits (91), Expect(6) = 2e-082
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -2 / -1
Query: 672 K*KCSHWVHLKLQYFI*E 619
K*KCSHWVHLKLQYFI E
Sbjct: 495 K*KCSHWVHLKLQYFIWE 442
Score = 42.3 bits (86), Expect(2) = 1e-062
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3 / +3
Query: 624 R*NTEVSSEPSGCTFTLKTCRGNSWSLHF 710
R*NTEVSSEPSGCTFT + + + +F
Sbjct: 447 R*NTEVSSEPSGCTFTFEDLQSKFMATYF 533
Score = 40.9 bits (83), Expect(4) = 7e-072
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -1 / -3
Query: 673 KVKVQPLGSLETSVFYL 623
KVKVQPLGSLETSVFYL
Sbjct: 496 KVKVQPLGSLETSVFYL 446
Score = 37.7 bits (76), Expect(5) = 3e-078
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1 / +1
Query: 625 DKILKFQVNPVAALSL 672
DKILKFQVNPVAALSL
Sbjct: 448 DKILKFQVNPVAALSL 495
Score = 36.3 bits (73), Expect(4) = 2e-063
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -3 / -2
Query: 674 QSESAATGFT*NFSILS 624
+SESAATGFT*NFSILS
Sbjct: 497 KSESAATGFT*NFSILS 447
Score = 34.5 bits (69), Expect(6) = 8e-097
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +3
Query: 560 TVPTVEGGCYWARRIMLCPNS 622
+ PT+EG CY AR ML PNS
Sbjct: 381 SAPTIEGWCYRARGFMLYPNS 443
Score = 33.1 bits (66), Expect(6) = 2e-082
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1 / -2
Query: 637 SVFYLRIWAEHNPSRPITSSFNS 569
S+ RIW +H S PIT SFNS
Sbjct: 458 SILSGRIWVQHKASCPITPSFNS 390
Score = 32.7 bits (65), Expect(6) = 2e-082
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1 / -1
Query: 799 RACYWSLFLTMIFYYVSSYNFYPF 728
R CYWSLFLTM F PF
Sbjct: 693 RVCYWSLFLTMSFTMFLHRKCLPF 622
Score = 31.8 bits (63), Expect(6) = 8e-097
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2 / +3
Query: 665 FHFEDLQRKFMVTSFC 712
F FEDLQ KFM T FC
Sbjct: 489 FTFEDLQSKFMATYFC 536
Score = 30.4 bits (60), Expect(5) = 3e-078
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3 / +1
Query: 651 PSGCTFTLKTCRGNSWSLHFVRL 719
P LKTCR NSW L FV L
Sbjct: 475 PVAALSLLKTCRVNSWPLTFVPL 543
Score = 30.4 bits (60), Expect(5) = 3e-078
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3 / +1
Query: 567 QLLKEDVIGREGLCSAQIL 623
+LLK+ VIG+E LC QIL
Sbjct: 388 RLLKDGVIGQEALCCTQIL 444
Score = 29.0 bits (57), Expect(4) = 2e-063
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / -3
Query: 212 AHWSPCPP 189
AHWSPCPP
Sbjct: 25 AHWSPCPP 2
Score = 26.7 bits (52), Expect(4) = 7e-072
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2 / -3
Query: 633 YFI*EFGQSIILLAQ*HPPSTVG 565
+++ EFG +I LA *H PS VG
Sbjct: 454 FYLGEFGYNIKPLAL*HHPSIVG 386
Score = 26.3 bits (51), Expect(6) = 2e-082
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 712 TK*SDHEFPLQVFK 671
TK S HEF LQVFK
Sbjct: 536 TKVSGHEFTLQVFK 495
Score = 24.9 bits (48), Expect(4) = 7e-072
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2 / -3
Query: 711 QNEVTMNFLCKSSK*K 664
Q V MN LCKSSK K
Sbjct: 535 QK*VAMNLLCKSSKVK 488
Score = 24.4 bits (47), Expect(6) = 8e-097
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +1
Query: 761 KNHC*EQTPIAGS 799
K HC EQ PIA S
Sbjct: 655 KTHCKEQAPIANS 693
Score = 24.0 bits (46), Expect(5) = 3e-078
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +2
Query: 762 KIIVRNKLQ*Q 794
K+IVRNKLQ*Q
Sbjct: 656 KLIVRNKLQ*Q 688
Score = 23.1 bits (44), Expect(4) = 2e-063
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / -1
Query: 713 HKMK*P*ISSASLQ 672
HK K P*I SASLQ
Sbjct: 537 HKSKWP*IYSASLQ 496
Score = 22.6 bits (43), Expect(6) = 8e-097
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2 / +3
Query: 713 EINYRERVEI 742
+INYRERV+I
Sbjct: 606 KINYRERVDI 635
Score = 22.6 bits (43), Expect(6) = 2e-082
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1 / -2
Query: 742 NFYPFSIINLT 710
N YPFSII+L+
Sbjct: 635 NVYPFSIIDLS 603
>gb|CD228356.1|CD228356 CCC1_7_A01.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_7_A01_A007 3', mRNA sequence
Length = 532
Score = 341 bits (738), Expect(2) = 1e-096
Identities = 142/145 (97%), Positives = 142/145 (97%)
Frame = +2 / +1
Query: 128 QPPLPDGYFGNVIFTATPLAEAGKVTSELAEGAAVIQGALDRMDNDYCRSALDYLELQPD 307
QPPLPDGYFGNVIFTATPLAEAGKVTS LAEGAAVIQGALDRMDNDYCRSALDYLELQPD
Sbjct: 1 QPPLPDGYFGNVIFTATPLAEAGKVTSGLAEGAAVIQGALDRMDNDYCRSALDYLELQPD 180
Query: 308 LSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDG 487
LSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDG
Sbjct: 181 LSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDG 360
Query: 488 SLSIAISLQAEHMEKFRKLIGEA*T 562
SLSIAISLQAEHMEKFRKLI E *T
Sbjct: 361 SLSIAISLQAEHMEKFRKLICEV*T 435
Score = 285 bits (617), Expect(2) = 8e-079
Identities = 115/144 (79%), Positives = 121/144 (84%)
Frame = +1 / +3
Query: 130 ASTTRWVLWQCHLHRDTTCXXXXXXXXXXRRSSSHPGSTG*DGQRLLPLSVRLPGASTGS 309
ASTTRW+LW CHLH DTTC RRSSSHPGSTG*DGQRLLPLS LPGA+TG
Sbjct: 3 ASTTRWLLW*CHLHCDTTC*GGQGDQWAGRRSSSHPGSTG*DGQRLLPLSAGLPGAATGF 182
Query: 310 VSTCAWSAYLPLPEPRAHQLGAPSYP*C*LRMGPACVHGARWHCV*RSGVCPPKCKWRRQ 489
VST AWS YLP+PEPRAHQLG PSYP*C LRMGP+CVHGAR +C+*RSGVCPPKCKWR Q
Sbjct: 183 VSTGAWSTYLPVPEPRAHQLGTPSYP*CRLRMGPSCVHGARRYCI*RSGVCPPKCKWRWQ 362
Query: 490 PVHCYLVAG*AHGEVPEANRRSLN 561
PVHCYL AG*AHGEVPEAN RSLN
Sbjct: 363 PVHCYLFAG*AHGEVPEANLRSLN 434
Score = 285 bits (616), Expect(2) = 3e-080
Identities = 117/144 (81%), Positives = 123/144 (85%)
Frame = -1 / -2
Query: 559 LSFAD*LPELLHVLSLQRDSNGQAAVAICTWEDKRQTFIRNATWPHEHRPAPSEVSIMDR 380
L+FAD*LPELLHVLSLQRDSNGQAA++ICTWEDKRQTFI N WPHEHR APSEV IMDR
Sbjct: 432 LNFAD*LPELLHVLSLQRDSNGQAAISICTWEDKRQTFICNTAWPHEHRTAPSEVGIMDR 253
Query: 379 KAHPAGEP*VRAAEGMRSTHKC*QIRLKLQXXXXXXXXXXVHPIQCSLDDCCSFCQLTGH 200
KA+PAGEP*VRA EGM STH+C*QIRL+LQ VHPIQCSLDDCCSFCQ TGH
Sbjct: 252 KAYPAGEP*VRAPEGMCSTHQC*QIRLQLQVVQR*AAVVVVHPIQCSLDDCCSFCQPTGH 73
Query: 199 LARLSKWCRGEDDIAKVPIW*WRL 128
LARLSKWCR EDDI KV IW*WRL
Sbjct: 72 LARLSKWCRSEDDITKVTIW*WRL 1
Score = 283 bits (612), Expect(2) = 5e-077
Identities = 123/145 (84%), Positives = 126/145 (86%)
Frame = -2 / -3
Query: 564 TV*ASPISFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASW 385
+V* S ISFRNFSMCSAC EIAMDRLPSPFALGRTNARPSYA+PPGPMNTGRPHPKSASW
Sbjct: 437 SV*TSQISFRNFSMCSACKEIAMDRLPSPFALGRTNARPSYAIPPGPMNTGRPHPKSASW 258
Query: 384 IGRRTQLVSPRFGQRKVCAPXXXXXXXXXXXXXSNAERQ*SLSILSSAPWMTAAPSASSL 205
IGRRTQLVSPRFG RKVCAP S+AERQ*SLSILSSAPWMTAAPSAS L
Sbjct: 257 IGRRTQLVSPRFGHRKVCAPRTSADKSGCSSR*SSAERQ*SLSILSSAPWMTAAPSASPL 78
Query: 204 VTLPASASGVAVKMTLPKYPSGSGG 130
VTLPASASGVAVKMTLPK PSGSGG
Sbjct: 77 VTLPASASGVAVKMTLPK*PSGSGG 3
Score = 237 bits (512), Expect = 2e-061
Identities = 102/145 (70%), Positives = 103/145 (71%)
Frame = +3 / +2
Query: 129 SLHYQMGTLAMSXXXXXXXXXXXXXXVSWQKEQQSSREHWIGWXXXXXXXXXXXWSFNRI 308
SLHYQM TL MS V WQKEQQSSREHWIGW WS NRI
Sbjct: 2 SLHYQMVTLVMSSSLRHHLLRRAR*PVGWQKEQQSSREHWIGWTTTTAAQRWTTWSCNRI 181
Query: 309 CQHLCVERIPSAART*GSPAGCAFLSMMLTSDGAGLCSWGQVALRMKVWRLSSQVQMATA 488
CQH CVE IPS ART*GSPAG AFLSMM TSDGA LCSWGQ L MKVWRLSSQVQM A
Sbjct: 182 CQHWCVEHIPSGART*GSPAGYAFLSMMPTSDGAVLCSWGQAVLHMKVWRLSSQVQMEMA 361
Query: 489 ACPLLSRCRLSTWRSSGS*SAKLKR 563
ACPLLS CRLSTWRSSGS*SAK K+
Sbjct: 362 ACPLLSLCRLSTWRSSGS*SAKFKQ 436
Score = 214 bits (462), Expect(2) = 3e-067
Identities = 88/104 (84%), Positives = 91/104 (87%)
Frame = -3 / -1
Query: 560 FKLRRLASGTSPCAQPATR*QWTGCRRHLHLGGQTPDLHTQCHLAP*TQAGPIRSQHHG* 381
FKLRRLASGTSPCAQPA R*QWTGC HLHLGGQTPDLH Q LAP*TQ GPIRS+HHG*
Sbjct: 433 FKLRRLASGTSPCAQPAKR*QWTGCHLHLHLGGQTPDLHMQYRLAP*TQDGPIRSRHHG* 254
Query: 380 EGAPSW*ALGSGSGRYALHAQVLTDPVEAPGSLTLSGSSRCPSY 249
EG PSW*ALGSG+GRY LHA VLT+PV APGS LSGSSRCPSY
Sbjct: 253 EGVPSW*ALGSGTGRYVLHAPVLTNPVAAPGSPALSGSSRCPSY 122
Score = 62.9 bits (131), Expect(2) = 3e-067
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = -3 / -1
Query: 212 AHWSPCPPQQVVSR*R*HCQSTHLVVEA 129
AHWSPCPPQQVVS+*R*H QS HLVVEA
Sbjct: 85 AHWSPCPPQQVVSQ*R*HYQSNHLVVEA 2
Score = 35.9 bits (72), Expect(2) = 3e-080
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -1 / -3
Query: 649 SLETSVFYLRIWAEHNPSRPITSSFNS 569
SL S+ RIW +H S PIT SFNS
Sbjct: 530 SLNFSILSGRIWVQHKASCPITPSFNS 450
Score = 34.5 bits (69), Expect(2) = 1e-096
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +3
Query: 560 TVPTVEGGCYWARRIMLCPNS 622
+ PT+EG CY AR ML PNS
Sbjct: 441 SAPTIEGWCYRARGFMLYPNS 503
Score = 30.4 bits (60), Expect(2) = 8e-079
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3 / +1
Query: 567 QLLKEDVIGREGLCSAQIL 623
+LLK+ VIG+E LC QIL
Sbjct: 448 RLLKDGVIGQEALCCTQIL 504
Score = 26.7 bits (52), Expect(2) = 5e-077
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2 / -1
Query: 633 YFI*EFGQSIILLAQ*HPPSTVG 565
+++ EFG +I LA *H PS VG
Sbjct: 514 FYLGEFGYNIKPLAL*HHPSIVG 446
>gb|CX619836.1|CX619836 GABR1_48_D10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_48_D10_A002 3', mRNA sequence
Length = 736
Score = 285 bits (617), Expect(6) = 2e-095
Identities = 120/124 (96%), Positives = 120/124 (96%)
Frame = +2 / +2
Query: 191 AGKVTSELAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSW 370
AGKVTS LAEGAAVIQGALDRMDNDYCRSALDYLELQPD SALVRGAHTFRCPNLGLTSW
Sbjct: 2 AGKVTSGLAEGAAVIQGALDRMDNDYCRSALDYLELQPDSSALVRGAHTFRCPNLGLTSW 181
Query: 371 VRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIG 550
VRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLI
Sbjct: 182 VRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIC 361
Query: 551 EA*T 562
E *T
Sbjct: 362 EV*T 373
Score = 247 bits (533), Expect(5) = 3e-078
Identities = 99/115 (86%), Positives = 104/115 (90%)
Frame = +1 / +1
Query: 217 RRSSSHPGSTG*DGQRLLPLSVRLPGASTGSVSTCAWSAYLPLPEPRAHQLGAPSYP*C* 396
RRSSSHPGSTG*DGQRLLPLS LPGA+TG VST AWS YLP+PEPRAHQLG PSYP*C
Sbjct: 28 RRSSSHPGSTG*DGQRLLPLSAGLPGAATGFVSTGAWSTYLPVPEPRAHQLGTPSYP*CR 207
Query: 397 LRMGPACVHGARWHCV*RSGVCPPKCKWRRQPVHCYLVAG*AHGEVPEANRRSLN 561
LRMGP+CVHGAR +C+*RSGVCPPKCKWR QPVHCYL AG*AHGEVPEAN RSLN
Sbjct: 208 LRMGPSCVHGARRYCI*RSGVCPPKCKWRWQPVHCYLFAG*AHGEVPEANLRSLN 372
Score = 242 bits (522), Expect(6) = 2e-082
Identities = 104/125 (83%), Positives = 107/125 (85%)
Frame = -2 / -2
Query: 564 TV*ASPISFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASW 385
+V* S ISFRNFSMCSAC EIAMDRLPSPFALGRTNARPSYA+PPGPMNTGRPHPKSASW
Sbjct: 375 SV*TSQISFRNFSMCSACKEIAMDRLPSPFALGRTNARPSYAIPPGPMNTGRPHPKSASW 196
Query: 384 IGRRTQLVSPRFGQRKVCAPXXXXXXXXXXXXXSNAERQ*SLSILSSAPWMTAAPSASSL 205
IGRRTQLVSPRFG RKVCAP S+AERQ*SLSILSSAPWMTAAPSAS L
Sbjct: 195 IGRRTQLVSPRFGHRKVCAPRTSADESGCSSR*SSAERQ*SLSILSSAPWMTAAPSASPL 16
Query: 204 VTLPA 190
VTLPA
Sbjct: 15 VTLPA 1
Score = 236 bits (509), Expect(4) = 2e-071
Identities = 98/123 (79%), Positives = 105/123 (85%)
Frame = -1 / -1
Query: 559 LSFAD*LPELLHVLSLQRDSNGQAAVAICTWEDKRQTFIRNATWPHEHRPAPSEVSIMDR 380
L+FAD*LPELLHVLSLQRDSNGQAA++ICTWEDKRQTFI N WPHEHR APSEV IMDR
Sbjct: 370 LNFAD*LPELLHVLSLQRDSNGQAAISICTWEDKRQTFICNTAWPHEHRTAPSEVGIMDR 191
Query: 379 KAHPAGEP*VRAAEGMRSTHKC*QIRLKLQXXXXXXXXXXVHPIQCSLDDCCSFCQLTGH 200
KA+PAGEP*VRA EGM STH+C*+IRL+LQ VHPIQCSLDDCCSFCQ TGH
Sbjct: 190 KAYPAGEP*VRAPEGMCSTHQC*RIRLQLQVVQR*AAVVVVHPIQCSLDDCCSFCQPTGH 11
Query: 199 LAR 191
LAR
Sbjct: 10 LAR 2
Score = 216 bits (467), Expect(2) = 9e-062
Identities = 91/119 (76%), Positives = 92/119 (77%)
Frame = +3 / +3
Query: 207 VSWQKEQQSSREHWIGWXXXXXXXXXXXWSFNRICQHLCVERIPSAART*GSPAGCAFLS 386
V WQKEQQSSREHWIGW WS NRI QH CVE IPS ART*GSPAG AFLS
Sbjct: 18 VGWQKEQQSSREHWIGWTTTTAAQRWTTWSCNRIRQHWCVEHIPSGART*GSPAGYAFLS 197
Query: 387 MMLTSDGAGLCSWGQVALRMKVWRLSSQVQMATAACPLLSRCRLSTWRSSGS*SAKLKR 563
MM TSDGA LCSWGQ L MKVWRLSSQVQM AACPLLS CRLSTWRSSGS*SAK K+
Sbjct: 198 MMPTSDGAVLCSWGQAVLHMKVWRLSSQVQMEMAACPLLSLCRLSTWRSSGS*SAKFKQ 374
Score = 214 bits (462), Expect(4) = 7e-063
Identities = 88/104 (84%), Positives = 91/104 (87%)
Frame = -3 / -3
Query: 560 FKLRRLASGTSPCAQPATR*QWTGCRRHLHLGGQTPDLHTQCHLAP*TQAGPIRSQHHG* 381
FKLRRLASGTSPCAQPA R*QWTGC HLHLGGQTPDLH Q LAP*TQ GPIRS+HHG*
Sbjct: 371 FKLRRLASGTSPCAQPAKR*QWTGCHLHLHLGGQTPDLHMQYRLAP*TQDGPIRSRHHG* 192
Query: 380 EGAPSW*ALGSGSGRYALHAQVLTDPVEAPGSLTLSGSSRCPSY 249
EG PSW*ALGSG+GRY LHA VLT+PV APGS LSGSSRCPSY
Sbjct: 191 EGVPSW*ALGSGTGRYVLHAPVLTNPVAAPGSPALSGSSRCPSY 60
Score = 46.4 bits (95), Expect(6) = 2e-095
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +3
Query: 620 SQIKY*SFK*TQWLHFHF 673
SQIKY*SFK*TQWLHFHF
Sbjct: 441 SQIKY*SFK*TQWLHFHF 494
Score = 44.6 bits (91), Expect(6) = 2e-082
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -2 / -1
Query: 672 K*KCSHWVHLKLQYFI*E 619
K*KCSHWVHLKLQYFI E
Sbjct: 493 K*KCSHWVHLKLQYFIWE 440
Score = 42.3 bits (86), Expect(2) = 9e-062
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3 / +1
Query: 624 R*NTEVSSEPSGCTFTLKTCRGNSWSLHF 710
R*NTEVSSEPSGCTFT + + + +F
Sbjct: 445 R*NTEVSSEPSGCTFTFEDLQSKFMATYF 531
Score = 40.9 bits (83), Expect(4) = 2e-071
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -1 / -3
Query: 673 KVKVQPLGSLETSVFYL 623
KVKVQPLGSLETSVFYL
Sbjct: 494 KVKVQPLGSLETSVFYL 444
Score = 37.7 bits (76), Expect(5) = 3e-078
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1 / +2
Query: 625 DKILKFQVNPVAALSL 672
DKILKFQVNPVAALSL
Sbjct: 446 DKILKFQVNPVAALSL 493
Score = 36.3 bits (73), Expect(4) = 7e-063
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -3 / -2
Query: 674 QSESAATGFT*NFSILS 624
+SESAATGFT*NFSILS
Sbjct: 495 KSESAATGFT*NFSILS 445
Score = 34.5 bits (69), Expect(6) = 2e-095
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +1
Query: 560 TVPTVEGGCYWARRIMLCPNS 622
+ PT+EG CY AR ML PNS
Sbjct: 379 SAPTIEGWCYRARGFMLYPNS 441
Score = 33.1 bits (66), Expect(6) = 2e-082
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1 / -2
Query: 637 SVFYLRIWAEHNPSRPITSSFNS 569
S+ RIW +H S PIT SFNS
Sbjct: 456 SILSGRIWVQHKASCPITPSFNS 388
Score = 32.7 bits (65), Expect(6) = 2e-082
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1 / -1
Query: 799 RACYWSLFLTMIFYYVSSYNFYPF 728
R CYWSLFLTM F PF
Sbjct: 691 RVCYWSLFLTMSFTMFLHRKCLPF 620
Score = 31.8 bits (63), Expect(6) = 2e-095
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2 / +1
Query: 665 FHFEDLQRKFMVTSFC 712
F FEDLQ KFM T FC
Sbjct: 487 FTFEDLQSKFMATYFC 534
Score = 30.4 bits (60), Expect(5) = 3e-078
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3 / +2
Query: 651 PSGCTFTLKTCRGNSWSLHFVRL 719
P LKTCR NSW L FV L
Sbjct: 473 PVAALSLLKTCRVNSWPLTFVPL 541
Score = 30.4 bits (60), Expect(5) = 3e-078
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3 / +2
Query: 567 QLLKEDVIGREGLCSAQIL 623
+LLK+ VIG+E LC QIL
Sbjct: 386 RLLKDGVIGQEALCCTQIL 442
Score = 26.7 bits (52), Expect(4) = 2e-071
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2 / -3
Query: 633 YFI*EFGQSIILLAQ*HPPSTVG 565
+++ EFG +I LA *H PS VG
Sbjct: 452 FYLGEFGYNIKPLAL*HHPSIVG 384
Score = 26.3 bits (51), Expect(6) = 2e-082
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 712 TK*SDHEFPLQVFK 671
TK S HEF LQVFK
Sbjct: 534 TKVSGHEFTLQVFK 493
Score = 25.8 bits (50), Expect(4) = 7e-063
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3 / -3
Query: 212 AHWSPCP 192
AHWSPCP
Sbjct: 23 AHWSPCP 3
Score = 24.9 bits (48), Expect(4) = 2e-071
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2 / -3
Query: 711 QNEVTMNFLCKSSK*K 664
Q V MN LCKSSK K
Sbjct: 533 QK*VAMNLLCKSSKVK 486
Score = 24.4 bits (47), Expect(6) = 2e-095
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +2
Query: 761 KNHC*EQTPIAGS 799
K HC EQ PIA S
Sbjct: 653 KTHCKEQAPIANS 691
Score = 24.0 bits (46), Expect(5) = 3e-078
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 762 KIIVRNKLQ*Q 794
K+IVRNKLQ*Q
Sbjct: 654 KLIVRNKLQ*Q 686
Score = 23.1 bits (44), Expect(4) = 7e-063
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / -1
Query: 713 HKMK*P*ISSASLQ 672
HK K P*I SASLQ
Sbjct: 535 HKSKWP*IYSASLQ 494
Score = 22.6 bits (43), Expect(6) = 2e-095
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2 / +1
Query: 713 EINYRERVEI 742
+INYRERV+I
Sbjct: 604 KINYRERVDI 633
Score = 22.6 bits (43), Expect(6) = 2e-082
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1 / -2
Query: 742 NFYPFSIINLT 710
N YPFSII+L+
Sbjct: 633 NVYPFSIIDLS 601
>gb|CD231568.1|CD231568 SS1_22_H03.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_22_H03_A012 3', mRNA sequence
Length = 634
Score = 221 bits (476), Expect(6) = 3e-076
Identities = 91/93 (97%), Positives = 91/93 (97%)
Frame = +2 / +2
Query: 284 DYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFV 463
DYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFV
Sbjct: 2 DYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFV 181
Query: 464 LPSANGDGSLSIAISLQAEHMEKFRKLIGEA*T 562
LPSANGDGSLSIAISLQAEHMEKFRKLI E *T
Sbjct: 182 LPSANGDGSLSIAISLQAEHMEKFRKLICEV*T 280
Score = 200 bits (431), Expect(5) = 2e-064
Identities = 78/92 (84%), Positives = 83/92 (90%)
Frame = +1 / +1
Query: 286 LPGASTGSVSTCAWSAYLPLPEPRAHQLGAPSYP*C*LRMGPACVHGARWHCV*RSGVCP 465
LPGA+TG VST AWS YLP+PEPRAHQLG PSYP*C LRMGP+CVHGAR +C+*RSGVCP
Sbjct: 4 LPGAATGFVSTGAWSTYLPVPEPRAHQLGTPSYP*CRLRMGPSCVHGARRYCI*RSGVCP 183
Query: 466 PKCKWRRQPVHCYLVAG*AHGEVPEANRRSLN 561
PKCKWR QPVHCYL AG*AHGEVPEAN RSLN
Sbjct: 184 PKCKWRWQPVHCYLFAG*AHGEVPEANLRSLN 279
Score = 191 bits (411), Expect(6) = 2e-067
Identities = 78/92 (84%), Positives = 81/92 (88%)
Frame = -3 / -3
Query: 560 FKLRRLASGTSPCAQPATR*QWTGCRRHLHLGGQTPDLHTQCHLAP*TQAGPIRSQHHG* 381
FKLRRLASGTSPCAQPA R*QWTGC HLHLGGQTPDLH Q LAP*TQ GPIRS+HHG*
Sbjct: 278 FKLRRLASGTSPCAQPAKR*QWTGCHLHLHLGGQTPDLHMQYRLAP*TQDGPIRSRHHG* 99
Query: 380 EGAPSW*ALGSGSGRYALHAQVLTDPVEAPGS 285
EG PSW*ALGSG+GRY LHA VLT+PV APGS
Sbjct: 98 EGVPSW*ALGSGTGRYVLHAPVLTNPVAAPGS 3
Score = 186 bits (401), Expect(4) = 8e-057
Identities = 77/90 (85%), Positives = 83/90 (92%)
Frame = -1 / -1
Query: 559 LSFAD*LPELLHVLSLQRDSNGQAAVAICTWEDKRQTFIRNATWPHEHRPAPSEVSIMDR 380
L+FAD*LPELLHVLSLQRDSNGQAA++ICTWEDKRQTFI N WPHEHR APSEV IMDR
Sbjct: 277 LNFAD*LPELLHVLSLQRDSNGQAAISICTWEDKRQTFICNTAWPHEHRTAPSEVGIMDR 98
Query: 379 KAHPAGEP*VRAAEGMRSTHKC*QIRLKLQ 290
KA+PAGEP*VRA EGM STH+C*QIRL+LQ
Sbjct: 97 KAYPAGEP*VRAPEGMCSTHQC*QIRLQLQ 8
Score = 185 bits (398), Expect(3) = 6e-052
Identities = 74/80 (92%), Positives = 76/80 (95%)
Frame = -2 / -2
Query: 564 TV*ASPISFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASW 385
+V* S ISFRNFSMCSAC EIAMDRLPSPFALGRTNARPSYA+PPGPMNTGRPHPKSASW
Sbjct: 282 SV*TSQISFRNFSMCSACKEIAMDRLPSPFALGRTNARPSYAIPPGPMNTGRPHPKSASW 103
Query: 384 IGRRTQLVSPRFGQRKVCAP 325
IGRRTQLVSPRFG RKVCAP
Sbjct: 102 IGRRTQLVSPRFGHRKVCAP 43
Score = 179 bits (385), Expect(2) = 1e-050
Identities = 76/91 (83%), Positives = 77/91 (84%)
Frame = +3 / +3
Query: 291 WSFNRICQHLCVERIPSAART*GSPAGCAFLSMMLTSDGAGLCSWGQVALRMKVWRLSSQ 470
WS NRICQH CVE IPS ART*GSPAG AFLSMM TSDGA LCSWGQ L MKVWRLSSQ
Sbjct: 9 WSCNRICQHWCVEHIPSGART*GSPAGYAFLSMMPTSDGAVLCSWGQAVLHMKVWRLSSQ 188
Query: 471 VQMATAACPLLSRCRLSTWRSSGS*SAKLKR 563
VQM AACPLLS CRLSTWRSSGS*SAK K+
Sbjct: 189 VQMEMAACPLLSLCRLSTWRSSGS*SAKFKQ 281
Score = 46.4 bits (95), Expect(6) = 3e-076
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +3
Query: 620 SQIKY*SFK*TQWLHFHF 673
SQIKY*SFK*TQWLHFHF
Sbjct: 348 SQIKY*SFK*TQWLHFHF 401
Score = 44.6 bits (91), Expect(6) = 2e-067
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -2 / -1
Query: 672 K*KCSHWVHLKLQYFI*E 619
K*KCSHWVHLKLQYFI E
Sbjct: 400 K*KCSHWVHLKLQYFIWE 347
Score = 42.3 bits (86), Expect(2) = 1e-050
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3 / +1
Query: 624 R*NTEVSSEPSGCTFTLKTCRGNSWSLHF 710
R*NTEVSSEPSGCTFT + + + +F
Sbjct: 352 R*NTEVSSEPSGCTFTFEDLQSKFMATYF 438
Score = 40.9 bits (83), Expect(4) = 8e-057
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -1 / -3
Query: 673 KVKVQPLGSLETSVFYL 623
KVKVQPLGSLETSVFYL
Sbjct: 401 KVKVQPLGSLETSVFYL 351
Score = 37.7 bits (76), Expect(5) = 2e-064
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1 / +2
Query: 625 DKILKFQVNPVAALSL 672
DKILKFQVNPVAALSL
Sbjct: 353 DKILKFQVNPVAALSL 400
Score = 36.3 bits (73), Expect(3) = 6e-052
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -3 / -2
Query: 674 QSESAATGFT*NFSILS 624
+SESAATGFT*NFSILS
Sbjct: 402 KSESAATGFT*NFSILS 352
Score = 34.5 bits (69), Expect(6) = 3e-076
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +1
Query: 560 TVPTVEGGCYWARRIMLCPNS 622
+ PT+EG CY AR ML PNS
Sbjct: 286 SAPTIEGWCYRARGFMLYPNS 348
Score = 33.1 bits (66), Expect(6) = 2e-067
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1 / -2
Query: 637 SVFYLRIWAEHNPSRPITSSFNS 569
S+ RIW +H S PIT SFNS
Sbjct: 363 SILSGRIWVQHKASCPITPSFNS 295
Score = 32.7 bits (65), Expect(6) = 2e-067
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1 / -1
Query: 799 RACYWSLFLTMIFYYVSSYNFYPF 728
R CYWSLFLTM F PF
Sbjct: 598 RVCYWSLFLTMSFTMFLHRKCLPF 527
Score = 31.8 bits (63), Expect(6) = 3e-076
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2 / +1
Query: 665 FHFEDLQRKFMVTSFC 712
F FEDLQ KFM T FC
Sbjct: 394 FTFEDLQSKFMATYFC 441
Score = 30.4 bits (60), Expect(5) = 2e-064
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3 / +2
Query: 651 PSGCTFTLKTCRGNSWSLHFVRL 719
P LKTCR NSW L FV L
Sbjct: 380 PVAALSLLKTCRVNSWPLTFVPL 448
Score = 30.4 bits (60), Expect(5) = 2e-064
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3 / +2
Query: 567 QLLKEDVIGREGLCSAQIL 623
+LLK+ VIG+E LC QIL
Sbjct: 293 RLLKDGVIGQEALCCTQIL 349
Score = 26.7 bits (52), Expect(4) = 8e-057
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2 / -3
Query: 633 YFI*EFGQSIILLAQ*HPPSTVG 565
+++ EFG +I LA *H PS VG
Sbjct: 359 FYLGEFGYNIKPLAL*HHPSIVG 291
Score = 26.3 bits (51), Expect(6) = 2e-067
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 712 TK*SDHEFPLQVFK 671
TK S HEF LQVFK
Sbjct: 441 TKVSGHEFTLQVFK 400
Score = 24.9 bits (48), Expect(4) = 8e-057
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2 / -3
Query: 711 QNEVTMNFLCKSSK*K 664
Q V MN LCKSSK K
Sbjct: 440 QK*VAMNLLCKSSKVK 393
Score = 24.4 bits (47), Expect(6) = 3e-076
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +2
Query: 761 KNHC*EQTPIAGS 799
K HC EQ PIA S
Sbjct: 560 KTHCKEQAPIANS 598
Score = 24.0 bits (46), Expect(5) = 2e-064
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 762 KIIVRNKLQ*Q 794
K+IVRNKLQ*Q
Sbjct: 561 KLIVRNKLQ*Q 593
Score = 23.1 bits (44), Expect(3) = 6e-052
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / -1
Query: 713 HKMK*P*ISSASLQ 672
HK K P*I SASLQ
Sbjct: 442 HKSKWP*IYSASLQ 401
Score = 22.6 bits (43), Expect(6) = 3e-076
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2 / +1
Query: 713 EINYRERVEI 742
+INYRERV+I
Sbjct: 511 KINYRERVDI 540
Score = 22.6 bits (43), Expect(6) = 2e-067
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1 / -2
Query: 742 NFYPFSIINLT 710
N YPFSII+L+
Sbjct: 540 NVYPFSIIDLS 508
>gb|BG357389.1|BG357389 OV2_29_C07.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 682
Score = 282 bits (610), Expect = 6e-075
Identities = 117/128 (91%), Positives = 121/128 (94%)
Frame = +2 / +1
Query: 164 IFTATPLAEAGKVTSELAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFR 343
IFTATPLA AG VT+ +AEGA VIQ ALDRMD+ YCRSALDYLELQPDLSALVRGAHTFR
Sbjct: 1 IFTATPLANAGTVTAGVAEGAPVIQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFR 180
Query: 344 CPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEH 523
CPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSAN DGSLS+AISLQAEH
Sbjct: 181 CPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEH 360
Query: 524 MEKFRKLI 547
MEKFRKLI
Sbjct: 361 MEKFRKLI 384
Score = 205 bits (442), Expect = 8e-052
Identities = 88/127 (69%), Positives = 97/127 (76%)
Frame = -2 / -3
Query: 546 ISFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQ 367
+SFRNFSMCSAC+E+A DRLPS ALG TNA PSYAMPPGPMNTGRPHPKSASW+GRRTQ
Sbjct: 383 MSFRNFSMCSACSEMATDRLPSRLALGSTNASPSYAMPPGPMNTGRPHPKSASWMGRRTQ 204
Query: 366 LVSPRFGQRKVCAPXXXXXXXXXXXXXSNAERQ*SLSILSSAPWMTAAPSASSLVTLPAS 187
LVSPR G R VCAP S+A+RQ SI SSA W+T APSA+ VT+PA
Sbjct: 203 LVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRSSAAWITGAPSATPAVTVPAF 24
Query: 186 ASGVAVK 166
ASGVAVK
Sbjct: 23 ASGVAVK 3
Score = 124 bits (265), Expect = 2e-027
Identities = 57/108 (52%), Positives = 73/108 (67%)
Frame = +1 / +3
Query: 235 PGSTG*DGQRLLPLSVRLPGASTGSVSTCAWSAYLPLPEPRAHQLGAPSYP*C*LRMGPA 414
PG G DG+R+LP+ LPGA+ G V A++P+P+P AHQLGAP++P LR+GPA
Sbjct: 72 PGGAGPDGRRVLPVGAGLPGAAAGPVGAGPRGAHVPVPQPGAHQLGAPAHPRRGLRVGPA 251
Query: 415 CVHGARWHCV*RSGVCPPKCKWRRQPVHCYLVAG*AHGEVPEANRRSL 558
VHG R H V + V P+ + RRQPV +L AG AHGEVPEA+ R L
Sbjct: 252 RVHGPRRHRVRGARVRAPQRQPRRQPVRGHLAAGGAHGEVPEAHLRLL 395
Score = 117 bits (250), Expect = 3e-025
Identities = 55/110 (50%), Positives = 69/110 (62%)
Frame = -1 / -2
Query: 562 RLSFAD*LPELLHVLSLQRDSNGQAAVAICTWEDKRQTFIRNATWPHEHRPAPSEVSIMD 383
R D LPELLHVL LQRD +GQAAVA+ E +R+ +R+A HEH PAP EV ++D
Sbjct: 399 RSEVVDELPELLHVLRLQRDGHGQAAVAVGAGEHEREPLVRDAAGAHEHGPAPPEVRVVD 220
Query: 382 RKAHPAGEP*VRAAEGMRSTHKC*QIRLKLQXXXXXXXXXXVHPIQCSLD 233
+AHPAGEP V A E +R + Q+RL+LQ VHP+Q LD
Sbjct: 219 GQAHPAGEPQVGAPERVRPADQRRQVRLQLQVVQRRPAVPVVHPVQRRLD 70
Score = 116 bits (247), Expect = 7e-025
Identities = 52/110 (47%), Positives = 58/110 (52%)
Frame = +3 / +2
Query: 213 WQKEQQSSREHWIGWXXXXXXXXXXXWSFNRICQHLCVERIPSAART*GSPAGCAFLSMM 392
W++ + SR W GW WS +R C+ R S A T GSPAGCA S
Sbjct: 50 WRRARP*SRRRWTGWTTGTAGRRWTTWSCSRTCRRWSAGRTRSGAPTWGSPAGCACPSTT 229
Query: 393 LTSDGAGLCSWGQVALRMKVWRLSSQVQMATAACPLLSRCRLSTWRSSGS 542
TS GAG CSW A R + R S ATAACP SRCR STWRSSGS
Sbjct: 230 RTSGGAGPCSWAPAASRTRGSRSCSPAPTATAACPWPSRCRRSTWRSSGS 379
Score = 111 bits (236), Expect = 2e-023
Identities = 55/110 (50%), Positives = 64/110 (58%)
Frame = -3 / -1
Query: 581 LLQQLAPFKLRRLASGTSPCAQPATR*QWTGCRRHLHLGGQTPDLHTQCHLAP*TQAGPI 402
LL + + + RR ASGTSPCA PA R TGCRR G +T T+C P*T+AGP
Sbjct: 418 LLGRSSEIRSRR*ASGTSPCAPPAARWPRTGCRRGWRWGARTRAPRTRCRRGP*TRAGPT 239
Query: 401 RSQHHG*EGAPSW*ALGSGSGRYALHAQVLTDPVEAPGSLTLSGSSRCPS 252
RS G GAPSW*A G G+G A T P APGS +GS+R PS
Sbjct: 238 RSPRRGWAGAPSW*APGWGTGTCAPRGPAPTGPAAAPGSPAPTGSTRRPS 89
>gb|CD224939.1|CD224939 CCC1_37_A04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_37_A04_A007 3', mRNA sequence
Length = 670
Score = 256 bits (554), Expect = 3e-067
Identities = 105/112 (93%), Positives = 108/112 (96%)
Frame = +2 / +2
Query: 212 LAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHD 391
+AEGAAVIQ ALDRMD+ YCRS LDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHD
Sbjct: 2 VAEGAAVIQAALDRMDDGYCRSPLDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHD 181
Query: 392 ADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLI 547
ADFGWGRPVFMGPGGIAYEGLAFVLPSAN DGSLS+AISLQAEHMEKFRKLI
Sbjct: 182 ADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLI 337
Score = 183 bits (394), Expect = 3e-045
Identities = 77/112 (68%), Positives = 85/112 (75%)
Frame = -2 / -2
Query: 546 ISFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQ 367
+SFRNFSMCSAC+E+A DRLPS ALG TNA PSYAMPPGPMNTGRPHPKSASW+GRRTQ
Sbjct: 336 MSFRNFSMCSACSEMATDRLPSRLALGSTNASPSYAMPPGPMNTGRPHPKSASWMGRRTQ 157
Query: 366 LVSPRFGQRKVCAPXXXXXXXXXXXXXSNAERQ*SLSILSSAPWMTAAPSAS 211
LVSPR G R VCAP S+ +RQ SI SSA W+TAAPSA+
Sbjct: 156 LVSPRLGHRNVCAPRTSADRSGCSSR*SSGDRQYPSSIRSSAAWITAAPSAT 1
Score = 124 bits (266), Expect = 2e-027
Identities = 57/108 (52%), Positives = 74/108 (68%)
Frame = +1 / +1
Query: 235 PGSTG*DGQRLLPLSVRLPGASTGSVSTCAWSAYLPLPEPRAHQLGAPSYP*C*LRMGPA 414
PG G DG+R+LP++ LPGA+ G V A++P+P+P AHQLGAP++P LR+GPA
Sbjct: 25 PGGAGPDGRRVLPVAAGLPGAAAGPVGAGPRGAHVPVPQPGAHQLGAPAHPRRGLRVGPA 204
Query: 415 CVHGARWHCV*RSGVCPPKCKWRRQPVHCYLVAG*AHGEVPEANRRSL 558
VHG R H V + V P+ + RRQPV +L AG AHGEVPEA+ R L
Sbjct: 205 RVHGPRRHRVRGARVRAPQRQPRRQPVRGHLAAGGAHGEVPEAHLRLL 348
Score = 117 bits (250), Expect = 3e-025
Identities = 55/110 (50%), Positives = 69/110 (62%)
Frame = -1 / -1
Query: 562 RLSFAD*LPELLHVLSLQRDSNGQAAVAICTWEDKRQTFIRNATWPHEHRPAPSEVSIMD 383
R D LPELLHVL LQRD +GQAAVA+ E +R+ +R+A HEH PAP EV ++D
Sbjct: 352 RSEVVDELPELLHVLRLQRDGHGQAAVAVGAGEHEREPLVRDAAGAHEHGPAPPEVRVVD 173
Query: 382 RKAHPAGEP*VRAAEGMRSTHKC*QIRLKLQXXXXXXXXXXVHPIQCSLD 233
+AHPAGEP V A E +R + Q+RL+LQ VHP+Q LD
Sbjct: 172 GQAHPAGEPQVGAPERVRPADQRRQVRLQLQVVQRRPAVPVVHPVQRRLD 23
Score = 116 bits (247), Expect = 7e-025
Identities = 52/110 (47%), Positives = 58/110 (52%)
Frame = +3 / +3
Query: 213 WQKEQQSSREHWIGWXXXXXXXXXXXWSFNRICQHLCVERIPSAART*GSPAGCAFLSMM 392
W++ + SR W GW WS +R C+ R S A T GSPAGCA S
Sbjct: 3 WRRARP*SRRRWTGWTTGTAGRRWTTWSCSRTCRRWSAGRTRSGAPTWGSPAGCACPSTT 182
Query: 393 LTSDGAGLCSWGQVALRMKVWRLSSQVQMATAACPLLSRCRLSTWRSSGS 542
TS GAG CSW A R + R S ATAACP SRCR STWRSSGS
Sbjct: 183 RTSGGAGPCSWAPAASRTRGSRSCSPAPTATAACPWPSRCRRSTWRSSGS 332
Score = 111 bits (238), Expect = 1e-023
Identities = 55/110 (50%), Positives = 64/110 (58%)
Frame = -3 / -3
Query: 581 LLQQLAPFKLRRLASGTSPCAQPATR*QWTGCRRHLHLGGQTPDLHTQCHLAP*TQAGPI 402
LL + + + RR ASGTSPCA PA R TGCRR G +T T+C P*T+AGP
Sbjct: 371 LLGRSSEIRSRR*ASGTSPCAPPAARWPRTGCRRGWRWGARTRAPRTRCRRGP*TRAGPT 192
Query: 401 RSQHHG*EGAPSW*ALGSGSGRYALHAQVLTDPVEAPGSLTLSGSSRCPS 252
RS G GAPSW*A G G+G A T P APGS +GS+R PS
Sbjct: 191 RSPRRGWAGAPSW*APGWGTGTCAPRGPAPTGPAAAPGSPAATGSTRRPS 42
>gb|BG103087.1|BG103087 RHIZ2_18_A04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 568
Score = 233 bits (503), Expect = 3e-060
Identities = 94/98 (95%), Positives = 96/98 (97%)
Frame = +2 / +3
Query: 254 MDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPG 433
MD+ YCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPG
Sbjct: 3 MDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPG 182
Query: 434 GIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLI 547
GIAYEGLAFVLPSAN DGSLS+AISLQAEHMEKFRKLI
Sbjct: 183 GIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLI 296
Score = 162 bits (348), Expect = 8e-039
Identities = 68/98 (69%), Positives = 74/98 (75%)
Frame = -2 / -1
Query: 546 ISFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQ 367
+SFRNFSMCSAC+E+A DRLPS ALG TNA PSYAMPPGPMNTGRPHPKSASW+GRRTQ
Sbjct: 295 MSFRNFSMCSACSEMATDRLPSRLALGSTNASPSYAMPPGPMNTGRPHPKSASWMGRRTQ 116
Query: 366 LVSPRFGQRKVCAPXXXXXXXXXXXXXSNAERQ*SLSI 253
LVSPR G R VCAP S+A+RQ SI
Sbjct: 115 LVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSI 2
Score = 115 bits (245), Expect = 1e-024
Identities = 53/102 (51%), Positives = 69/102 (67%)
Frame = +1 / +2
Query: 253 DGQRLLPLSVRLPGASTGSVSTCAWSAYLPLPEPRAHQLGAPSYP*C*LRMGPACVHGAR 432
DG+R+LP+ LPGA+ G V A++P+P+P AHQLGAP++P LR+GP VHG R
Sbjct: 2 DGRRVLPVGAGLPGAAAGPVGAGPRGAHVPVPQPGAHQLGAPAHPRRGLRVGPPRVHGPR 181
Query: 433 WHCV*RSGVCPPKCKWRRQPVHCYLVAG*AHGEVPEANRRSL 558
H V + V P+ + RRQPV +L AG AHGEVPEA+ R L
Sbjct: 182 RHRVRGARVRAPQRQPRRQPVRGHLAAGGAHGEVPEAHLRLL 307
Score = 108 bits (230), Expect = 1e-022
Identities = 54/110 (49%), Positives = 62/110 (56%)
Frame = -3 / -2
Query: 581 LLQQLAPFKLRRLASGTSPCAQPATR*QWTGCRRHLHLGGQTPDLHTQCHLAP*TQAGPI 402
LL + + RR ASGTSPCA PA R TGCRR G +T T+C P*T+ GP
Sbjct: 330 LLGRSLEIRSRR*ASGTSPCAPPAARWPRTGCRRGWRWGARTRAPRTRCRRGP*TRGGPT 151
Query: 401 RSQHHG*EGAPSW*ALGSGSGRYALHAQVLTDPVEAPGSLTLSGSSRCPS 252
RS G GAPSW*A G G+G A T P APGS +GS+R PS
Sbjct: 150 RSPRRGWAGAPSW*APGWGTGTCAPRGPAPTGPAAAPGSPAPTGSTRRPS 1
Score = 105 bits (225), Expect = 7e-022
Identities = 48/91 (52%), Positives = 61/91 (67%)
Frame = -1 / -3
Query: 562 RLSFAD*LPELLHVLSLQRDSNGQAAVAICTWEDKRQTFIRNATWPHEHRPAPSEVSIMD 383
R D LPELLHVL LQRD +GQAAVA+ E +R+ +R+A HEH AP EV ++D
Sbjct: 311 RSEVVDELPELLHVLRLQRDGHGQAAVAVGAGEHEREPLVRDAAGAHEHGAAPPEVRVVD 132
Query: 382 RKAHPAGEP*VRAAEGMRSTHKC*QIRLKLQ 290
+AHPAGEP V A E +R + Q+RL+LQ
Sbjct: 131 GQAHPAGEPQVGAPERVRPADQRRQVRLQLQ 39
>gb|CN130722.1|CN130722 RHOH1_43_H02.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_43_H02_A002 3', mRNA sequence
Length = 737
Score = 139 bits (298), Expect(6) = 3e-052
Identities = 55/60 (91%), Positives = 57/60 (95%)
Frame = -2 / -3
Query: 564 TV*ASPISFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASW 385
+V* S ISFRNFSMCSAC EIAMDRLPSPFALGRTNARPSYA+PPGPMNTGRPHPKSASW
Sbjct: 381 SV*TSQISFRNFSMCSACKEIAMDRLPSPFALGRTNARPSYAIPPGPMNTGRPHPKSASW 202
Score = 138 bits (295), Expect(5) = 2e-050
Identities = 57/60 (95%), Positives = 58/60 (96%)
Frame = +2 / +2
Query: 383 IHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGEA*T 562
+HDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLI E *T
Sbjct: 200 LHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLICEV*T 379
Score = 136 bits (292), Expect(5) = 4e-045
Identities = 54/75 (72%), Positives = 60/75 (80%)
Frame = +1 / +1
Query: 337 LPLPEPRAHQLGAPSYP*C*LRMGPACVHGARWHCV*RSGVCPPKCKWRRQPVHCYLVAG 516
+P + + G P P*C LRMGP+CVHGAR +C+*RSGVCPPKCKWR QPVHCYL AG
Sbjct: 154 MPFIDRTLIRAGDPPTP*CRLRMGPSCVHGARRYCI*RSGVCPPKCKWRWQPVHCYLFAG 333
Query: 517 *AHGEVPEANRRSLN 561
*AHGEVPEAN RSLN
Sbjct: 334 *AHGEVPEANLRSLN 378
Score = 132 bits (282), Expect(4) = 2e-040
Identities = 53/65 (81%), Positives = 56/65 (86%)
Frame = -3 / -1
Query: 560 FKLRRLASGTSPCAQPATR*QWTGCRRHLHLGGQTPDLHTQCHLAP*TQAGPIRSQHHG* 381
FKLRRLASGTSPCAQPA R*QWTGC HLHLGGQTPDLH Q LAP*TQ GPIRS+HHG
Sbjct: 377 FKLRRLASGTSPCAQPAKR*QWTGCHLHLHLGGQTPDLHMQYRLAP*TQDGPIRSRHHGV 198
Query: 380 EGAPS 366
G+P+
Sbjct: 197 GGSPA 183
Score = 127 bits (272), Expect(3) = 2e-034
Identities = 51/63 (80%), Positives = 55/63 (87%)
Frame = -1 / -2
Query: 559 LSFAD*LPELLHVLSLQRDSNGQAAVAICTWEDKRQTFIRNATWPHEHRPAPSEVSIMDR 380
L+FAD*LPELLHVLSLQRDSNGQAA++ICTWEDKRQTFI N WPHEHR APSEV IM+
Sbjct: 376 LNFAD*LPELLHVLSLQRDSNGQAAISICTWEDKRQTFICNTAWPHEHRTAPSEVGIMEL 197
Query: 379 KAH 371
H
Sbjct: 196 VDH 188
Score = 117 bits (250), Expect(2) = 3e-031
Identities = 50/60 (83%), Positives = 51/60 (85%)
Frame = +3 / +3
Query: 384 SMMLTSDGAGLCSWGQVALRMKVWRLSSQVQMATAACPLLSRCRLSTWRSSGS*SAKLKR 563
SMM TSDGA LCSWGQ L MKVWRLSSQVQM AACPLLS CRLSTWRSSGS*SAK K+
Sbjct: 201 SMMPTSDGAVLCSWGQAVLHMKVWRLSSQVQMEMAACPLLSLCRLSTWRSSGS*SAKFKQ 380
Score = 46.4 bits (95), Expect(5) = 2e-050
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +3
Query: 620 SQIKY*SFK*TQWLHFHF 673
SQIKY*SFK*TQWLHFHF
Sbjct: 447 SQIKY*SFK*TQWLHFHF 500
Score = 44.6 bits (91), Expect(6) = 3e-052
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -2 / -2
Query: 672 K*KCSHWVHLKLQYFI*E 619
K*KCSHWVHLKLQYFI E
Sbjct: 499 K*KCSHWVHLKLQYFIWE 446
Score = 39.6 bits (80), Expect(2) = 3e-031
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3 / +1
Query: 624 R*NTEVSSEPSGCTFTLKTCRGNSWSLHF 710
R*NTEVSSEPSGC FT + + + +F
Sbjct: 451 R*NTEVSSEPSGCIFTFEDLQSKFMATYF 537
Score = 39.6 bits (80), Expect(4) = 2e-040
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -1 / -1
Query: 673 KVKVQPLGSLETSVFYL 623
KVK+QPLGSLETSVFYL
Sbjct: 500 KVKMQPLGSLETSVFYL 450
Score = 35.9 bits (72), Expect(5) = 4e-045
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / +2
Query: 625 DKILKFQVNPVAALSL 672
DKILKFQVNPVAA SL
Sbjct: 452 DKILKFQVNPVAAFSL 499
Score = 35.0 bits (70), Expect(3) = 2e-034
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = -3 / -3
Query: 674 QSESAATGFT*NFSILS 624
+SE+AATGFT*NFSILS
Sbjct: 501 KSENAATGFT*NFSILS 451
Score = 34.5 bits (69), Expect(5) = 2e-050
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +1
Query: 560 TVPTVEGGCYWARRIMLCPNS 622
+ PT+EG CY AR ML PNS
Sbjct: 385 SAPTIEGWCYRARGFMLYPNS 447
Score = 33.1 bits (66), Expect(6) = 3e-052
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1 / -3
Query: 637 SVFYLRIWAEHNPSRPITSSFNS 569
S+ RIW +H S PIT SFNS
Sbjct: 462 SILSGRIWVQHKASCPITPSFNS 394
Score = 32.7 bits (65), Expect(6) = 3e-052
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1 / -2
Query: 799 RACYWSLFLTMIFYYVSSYNFYPF 728
R CYWSLFLTM F PF
Sbjct: 697 RVCYWSLFLTMSFTMFLHRKCLPF 626
Score = 31.8 bits (63), Expect(5) = 2e-050
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2 / +1
Query: 665 FHFEDLQRKFMVTSFC 712
F FEDLQ KFM T FC
Sbjct: 493 FTFEDLQSKFMATYFC 540
Score = 30.4 bits (60), Expect(5) = 4e-045
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3 / +2
Query: 567 QLLKEDVIGREGLCSAQIL 623
+LLK+ VIG+E LC QIL
Sbjct: 392 RLLKDGVIGQEALCCTQIL 448
Score = 29.9 bits (59), Expect(5) = 4e-045
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 672 LKTCRGNSWSLHFVRL 719
LKTCR NSW L FV L
Sbjct: 500 LKTCRVNSWPLTFVPL 547
Score = 26.7 bits (52), Expect(4) = 2e-040
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2 / -1
Query: 633 YFI*EFGQSIILLAQ*HPPSTVG 565
+++ EFG +I LA *H PS VG
Sbjct: 458 FYLGEFGYNIKPLAL*HHPSIVG 390
Score = 26.3 bits (51), Expect(6) = 3e-052
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 712 TK*SDHEFPLQVFK 671
TK S HEF LQVFK
Sbjct: 540 TKVSGHEFTLQVFK 499
Score = 24.9 bits (48), Expect(4) = 2e-040
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2 / -1
Query: 711 QNEVTMNFLCKSSK*K 664
Q V MN LCKSSK K
Sbjct: 539 QK*VAMNLLCKSSKVK 492
Score = 24.4 bits (47), Expect(5) = 2e-050
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +2
Query: 761 KNHC*EQTPIAGS 799
K HC EQ PIA S
Sbjct: 659 KTHCKEQAPIANS 697
Score = 24.0 bits (46), Expect(5) = 4e-045
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 762 KIIVRNKLQ*Q 794
K+IVRNKLQ*Q
Sbjct: 660 KLIVRNKLQ*Q 692
Score = 23.1 bits (44), Expect(3) = 2e-034
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / -2
Query: 713 HKMK*P*ISSASLQ 672
HK K P*I SASLQ
Sbjct: 541 HKSKWP*IYSASLQ 500
Score = 22.6 bits (43), Expect(6) = 3e-052
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1 / -3
Query: 742 NFYPFSIINLT 710
N YPFSII+L+
Sbjct: 639 NVYPFSIIDLS 607
>gb|CD220761.1|CD220761 CCC1_69_C10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_69_C10_A007 3', mRNA sequence
Length = 538
Score = 139 bits (298), Expect(6) = 3e-052
Identities = 55/60 (91%), Positives = 57/60 (95%)
Frame = -2 / -3
Query: 564 TV*ASPISFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASW 385
+V* S ISFRNFSMCSAC EIAMDRLPSPFALGRTNARPSYA+PPGPMNTGRPHPKSASW
Sbjct: 182 SV*TSQISFRNFSMCSACKEIAMDRLPSPFALGRTNARPSYAIPPGPMNTGRPHPKSASW 3
Score = 138 bits (297), Expect(6) = 3e-052
Identities = 58/60 (96%), Positives = 58/60 (96%)
Frame = +2 / +1
Query: 383 IHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGEA*T 562
IHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLI E *T
Sbjct: 1 IHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLICEV*T 180
Score = 132 bits (283), Expect(5) = 1e-044
Identities = 51/59 (86%), Positives = 54/59 (91%)
Frame = +1 / +3
Query: 385 P*C*LRMGPACVHGARWHCV*RSGVCPPKCKWRRQPVHCYLVAG*AHGEVPEANRRSLN 561
P*C LRMGP+CVHGAR +C+*RSGVCPPKCKWR QPVHCYL AG*AHGEVPEAN RSLN
Sbjct: 3 P*CRLRMGPSCVHGARRYCI*RSGVCPPKCKWRWQPVHCYLFAG*AHGEVPEANLRSLN 179
Score = 128 bits (274), Expect(4) = 1e-039
Identities = 51/59 (86%), Positives = 54/59 (91%)
Frame = -1 / -2
Query: 559 LSFAD*LPELLHVLSLQRDSNGQAAVAICTWEDKRQTFIRNATWPHEHRPAPSEVSIMD 383
L+FAD*LPELLHVLSLQRDSNGQAA++ICTWEDKRQTFI N WPHEHR APSEV IMD
Sbjct: 177 LNFAD*LPELLHVLSLQRDSNGQAAISICTWEDKRQTFICNTAWPHEHRTAPSEVGIMD 1
Score = 127 bits (273), Expect(3) = 6e-035
Identities = 51/59 (86%), Positives = 52/59 (88%)
Frame = -3 / -1
Query: 560 FKLRRLASGTSPCAQPATR*QWTGCRRHLHLGGQTPDLHTQCHLAP*TQAGPIRSQHHG 384
FKLRRLASGTSPCAQPA R*QWTGC HLHLGGQTPDLH Q LAP*TQ GPIRS+HHG
Sbjct: 178 FKLRRLASGTSPCAQPAKR*QWTGCHLHLHLGGQTPDLHMQYRLAP*TQDGPIRSRHHG 2
Score = 117 bits (250), Expect(2) = 4e-032
Identities = 50/60 (83%), Positives = 51/60 (85%)
Frame = +3 / +2
Query: 384 SMMLTSDGAGLCSWGQVALRMKVWRLSSQVQMATAACPLLSRCRLSTWRSSGS*SAKLKR 563
SMM TSDGA LCSWGQ L MKVWRLSSQVQM AACPLLS CRLSTWRSSGS*SAK K+
Sbjct: 2 SMMPTSDGAVLCSWGQAVLHMKVWRLSSQVQMEMAACPLLSLCRLSTWRSSGS*SAKFKQ 181
Score = 46.4 bits (95), Expect(6) = 3e-052
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +2
Query: 620 SQIKY*SFK*TQWLHFHF 673
SQIKY*SFK*TQWLHFHF
Sbjct: 248 SQIKY*SFK*TQWLHFHF 301
Score = 44.6 bits (91), Expect(6) = 3e-052
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -2 / -2
Query: 672 K*KCSHWVHLKLQYFI*E 619
K*KCSHWVHLKLQYFI E
Sbjct: 300 K*KCSHWVHLKLQYFIWE 247
Score = 42.3 bits (86), Expect(2) = 4e-032
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3 / +3
Query: 624 R*NTEVSSEPSGCTFTLKTCRGNSWSLHF 710
R*NTEVSSEPSGCTFT + + + +F
Sbjct: 252 R*NTEVSSEPSGCTFTFEDLQSKFMATYF 338
Score = 40.9 bits (83), Expect(4) = 1e-039
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -1 / -1
Query: 673 KVKVQPLGSLETSVFYL 623
KVKVQPLGSLETSVFYL
Sbjct: 301 KVKVQPLGSLETSVFYL 251
Score = 37.7 bits (76), Expect(5) = 1e-044
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1 / +1
Query: 625 DKILKFQVNPVAALSL 672
DKILKFQVNPVAALSL
Sbjct: 253 DKILKFQVNPVAALSL 300
Score = 36.3 bits (73), Expect(3) = 6e-035
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -3 / -3
Query: 674 QSESAATGFT*NFSILS 624
+SESAATGFT*NFSILS
Sbjct: 302 KSESAATGFT*NFSILS 252
Score = 34.5 bits (69), Expect(6) = 3e-052
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +3
Query: 560 TVPTVEGGCYWARRIMLCPNS 622
+ PT+EG CY AR ML PNS
Sbjct: 186 SAPTIEGWCYRARGFMLYPNS 248
Score = 33.1 bits (66), Expect(6) = 3e-052
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1 / -3
Query: 637 SVFYLRIWAEHNPSRPITSSFNS 569
S+ RIW +H S PIT SFNS
Sbjct: 263 SILSGRIWVQHKASCPITPSFNS 195
Score = 32.7 bits (65), Expect(6) = 3e-052
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1 / -2
Query: 799 RACYWSLFLTMIFYYVSSYNFYPF 728
R CYWSLFLTM F PF
Sbjct: 498 RVCYWSLFLTMSFTMFLHRKCLPF 427
Score = 31.8 bits (63), Expect(6) = 3e-052
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2 / +3
Query: 665 FHFEDLQRKFMVTSFC 712
F FEDLQ KFM T FC
Sbjct: 294 FTFEDLQSKFMATYFC 341
Score = 30.4 bits (60), Expect(5) = 1e-044
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3 / +1
Query: 651 PSGCTFTLKTCRGNSWSLHFVRL 719
P LKTCR NSW L FV L
Sbjct: 280 PVAALSLLKTCRVNSWPLTFVPL 348
Score = 30.4 bits (60), Expect(5) = 1e-044
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3 / +1
Query: 567 QLLKEDVIGREGLCSAQIL 623
+LLK+ VIG+E LC QIL
Sbjct: 193 RLLKDGVIGQEALCCTQIL 249
Score = 26.7 bits (52), Expect(4) = 1e-039
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2 / -1
Query: 633 YFI*EFGQSIILLAQ*HPPSTVG 565
+++ EFG +I LA *H PS VG
Sbjct: 259 FYLGEFGYNIKPLAL*HHPSIVG 191
Score = 26.3 bits (51), Expect(6) = 3e-052
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 712 TK*SDHEFPLQVFK 671
TK S HEF LQVFK
Sbjct: 341 TKVSGHEFTLQVFK 300
Score = 24.9 bits (48), Expect(4) = 1e-039
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2 / -1
Query: 711 QNEVTMNFLCKSSK*K 664
Q V MN LCKSSK K
Sbjct: 340 QK*VAMNLLCKSSKVK 293
Score = 24.4 bits (47), Expect(6) = 3e-052
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +1
Query: 761 KNHC*EQTPIAGS 799
K HC EQ PIA S
Sbjct: 460 KTHCKEQAPIANS 498
Score = 24.0 bits (46), Expect(5) = 1e-044
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +2
Query: 762 KIIVRNKLQ*Q 794
K+IVRNKLQ*Q
Sbjct: 461 KLIVRNKLQ*Q 493
Score = 23.1 bits (44), Expect(3) = 6e-035
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / -2
Query: 713 HKMK*P*ISSASLQ 672
HK K P*I SASLQ
Sbjct: 342 HKSKWP*IYSASLQ 301
Score = 22.6 bits (43), Expect(6) = 3e-052
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2 / +3
Query: 713 EINYRERVEI 742
+INYRERV+I
Sbjct: 411 KINYRERVDI 440
Score = 22.6 bits (43), Expect(6) = 3e-052
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1 / -3
Query: 742 NFYPFSIINLT 710
N YPFSII+L+
Sbjct: 440 NVYPFSIIDLS 408
>gb|BE355906.1|BE355906 DG1_11_D11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 254
Score = 203 bits (437), Expect = 4e-051
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +2 / +3
Query: 296 LQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSA 475
LQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSA
Sbjct: 3 LQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSA 182
Query: 476 NGDGSLSIAISLQAEHMEKFRKLI 547
N DGSLS+AISLQAEHMEKFRKLI
Sbjct: 183 NRDGSLSVAISLQAEHMEKFRKLI 254
Score = 159 bits (341), Expect = 7e-038
Identities = 62/74 (83%), Positives = 66/74 (89%)
Frame = -2 / -2
Query: 546 ISFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQ 367
+SFRNFSMCSAC+E+A DRLPS ALG TNA PSYAMPPGPMNTGRPHPKSASW+GRRTQ
Sbjct: 253 MSFRNFSMCSACSEMATDRLPSRLALGSTNASPSYAMPPGPMNTGRPHPKSASWMGRRTQ 74
Query: 366 LVSPRFGQRKVCAP 325
LVSPR G R VCAP
Sbjct: 73 LVSPRLGHRNVCAP 32
Score = 103 bits (220), Expect = 3e-021
Identities = 45/82 (54%), Positives = 58/82 (70%)
Frame = -1 / -1
Query: 541 LPELLHVLSLQRDSNGQAAVAICTWEDKRQTFIRNATWPHEHRPAPSEVSIMDRKAHPAG 362
LPELLHVL LQRD +GQAAVA+ E +R+ +R+A HEH PAP EV ++D +AHPAG
Sbjct: 248 LPELLHVLRLQRDGHGQAAVAVGAGEHEREPLVRDAAGAHEHGPAPPEVRVVDGQAHPAG 69
Query: 361 EP*VRAAEGMRSTHKC*QIRLK 296
EP V A E +R + Q+RL+
Sbjct: 68 EPQVGAPERVRPADQRRQVRLQ 3
>gb|BG051515.1|BG051515 FM1_57_E01.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 504
Score = 187 bits (403), Expect = 2e-046
Identities = 75/77 (97%), Positives = 76/77 (98%)
Frame = +2 / +2
Query: 317 LVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLS 496
LVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSAN DGSLS
Sbjct: 2 LVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLS 181
Query: 497 IAISLQAEHMEKFRKLI 547
+AISLQAEHMEKFRKLI
Sbjct: 182 VAISLQAEHMEKFRKLI 232
Score = 159 bits (341), Expect = 7e-038
Identities = 62/74 (83%), Positives = 66/74 (89%)
Frame = -2 / -1
Query: 546 ISFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQ 367
+SFRNFSMCSAC+E+A DRLPS ALG TNA PSYAMPPGPMNTGRPHPKSASW+GRRTQ
Sbjct: 231 MSFRNFSMCSACSEMATDRLPSRLALGSTNASPSYAMPPGPMNTGRPHPKSASWMGRRTQ 52
Query: 366 LVSPRFGQRKVCAP 325
LVSPR G R VCAP
Sbjct: 51 LVSPRLGHRNVCAP 10
>gb|BG102542.1|BG102542 RHIZ2_34_D03.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 493
Score = 183 bits (395), Expect = 3e-045
Identities = 73/75 (97%), Positives = 74/75 (98%)
Frame = +2 / +3
Query: 323 RGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIA 502
RGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSAN DGSLS+A
Sbjct: 3 RGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVA 182
Query: 503 ISLQAEHMEKFRKLI 547
ISLQAEHMEKFRKLI
Sbjct: 183 ISLQAEHMEKFRKLI 227
Score = 159 bits (341), Expect = 7e-038
Identities = 62/74 (83%), Positives = 66/74 (89%)
Frame = -2 / -1
Query: 546 ISFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQ 367
+SFRNFSMCSAC+E+A DRLPS ALG TNA PSYAMPPGPMNTGRPHPKSASW+GRRTQ
Sbjct: 226 MSFRNFSMCSACSEMATDRLPSRLALGSTNASPSYAMPPGPMNTGRPHPKSASWMGRRTQ 47
Query: 366 LVSPRFGQRKVCAP 325
LVSPR G R VCAP
Sbjct: 46 LVSPRLGHRNVCAP 5
>gb|BE355598.1|BE355598 DG1_115_H07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 464
Score = 181 bits (389), Expect = 2e-044
Identities = 72/78 (92%), Positives = 75/78 (96%)
Frame = +2 / +1
Query: 314 ALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSL 493
ALVRGAHTFRCPN+GLTSWVR+PIHD DFGWGRPVFMGPGGIAYEGLAFVLPSAN DGSL
Sbjct: 1 ALVRGAHTFRCPNMGLTSWVRVPIHDTDFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSL 180
Query: 494 SIAISLQAEHMEKFRKLI 547
S+AISLQAEHM KFRKLI
Sbjct: 181 SVAISLQAEHM*KFRKLI 234
Score = 149 bits (319), Expect = 8e-035
Identities = 58/74 (78%), Positives = 62/74 (83%)
Frame = -2 / -1
Query: 546 ISFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQ 367
+SFRNF MCSAC+E+A DRLPS ALG TNA PSYAMPPGPMNTGRPHPKS SW+G RTQ
Sbjct: 233 MSFRNFYMCSACSEMATDRLPSRLALGSTNASPSYAMPPGPMNTGRPHPKSVSWMGTRTQ 54
Query: 366 LVSPRFGQRKVCAP 325
LVSP G R VCAP
Sbjct: 53 LVSPMLGHRNVCAP 12
>gb|AW285351.1|AW285351 LG1_244_C06.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 538
Score = 178 bits (384), Expect = 8e-044
Identities = 71/73 (97%), Positives = 72/73 (98%)
Frame = +2 / +1
Query: 329 AHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAIS 508
AHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSAN DGSLS+AIS
Sbjct: 1 AHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAIS 180
Query: 509 LQAEHMEKFRKLI 547
LQAEHMEKFRKLI
Sbjct: 181 LQAEHMEKFRKLI 219
Score = 154 bits (330), Expect = 2e-036
Identities = 60/72 (83%), Positives = 64/72 (88%)
Frame = -2 / -3
Query: 546 ISFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQ 367
+SFRNFSMCSAC+E+A DRLPS ALG TNA PSYAMPPGPMNTGRPHPKSASW+GRRTQ
Sbjct: 218 MSFRNFSMCSACSEMATDRLPSRLALGSTNASPSYAMPPGPMNTGRPHPKSASWMGRRTQ 39
Query: 366 LVSPRFGQRKVC 331
LVSPR G R VC
Sbjct: 38 LVSPRLGHRNVC 3
>gb|BZ332129.1|BZ332129 hx25e11.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx25e11 5', DNA sequence
Length = 463
Score = 147 bits (316), Expect = 2e-034
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +2 / +2
Query: 2 APRFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATP 181
APRFSTYAVLAAHVW+C SLAR LP +QPTKLYCATDGRQ LQPPLP+GYFGNVIFTATP
Sbjct: 263 APRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVIFTATP 442
Query: 182 LAEAGKV 202
LA AG V
Sbjct: 443 LANAGTV 463
Score = 120 bits (256), Expect = 4e-026
Identities = 53/67 (79%), Positives = 57/67 (85%)
Frame = -2 / -2
Query: 201 TLPASASGVAVKMTLPKYPSGSGGCSV*RPSVAQYNLVGCSGGRLRARETHFQTCAASTA 22
T+PA ASGVAVK+TLPK PSGSGGCS RPSVAQY+LVG S GR RAR+ H TCAASTA
Sbjct: 462 TVPAFASGVAVKITLPK*PSGSGGCSRCRPSVAQYSLVGWSAGRPRARDAHRHTCAASTA 283
Query: 21 YVLNRGA 1
YVLNRGA
Sbjct: 282 YVLNRGA 262
>gb|CL155605.1|CL155605 104_341_10782265_114_31471_361 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782265, DNA
sequence
Length = 737
Score = 83.5 bits (176), Expect(2) = 1e-033
Identities = 38/87 (43%), Positives = 47/87 (54%)
Frame = +2 / -2
Query: 35 AHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEAGKVTSEL 214
A VW+C ARSLP + T+L+ D R L PPLP GYFGN + + LA G+V
Sbjct: 736 ALVWQCACRARSLPADAETRLFSMVDMRARLAPPLPPGYFGNAVIRTSALATVGEVVGNP 557
Query: 215 AEGAAVIQGALDRMDNDYCRSALDYLE 295
AA A +DY RS +DYLE
Sbjct: 556 VGYAARRALAATSQGDDYARSLVDYLE 476
Score = 81.7 bits (172), Expect(2) = 1e-033
Identities = 28/68 (41%), Positives = 47/68 (69%)
Frame = +2 / -2
Query: 350 NLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHME 529
+L SW+ + +HD+DFGWG PVFMGP + Y G +V+ + +G++++A+SL+ E M
Sbjct: 430 HLRAISWMGMSLHDSDFGWGAPVFMGPALMYYSGFVYVMQAPGKEGAVALALSLEPESMP 251
Query: 530 KFRKLIGE 553
+FRK+ +
Sbjct: 250 EFRKVFAD 227
>gb|CW022568.1|CW022568 104_162_10431922_1_30008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10431922, DNA
sequence
Length = 626
Score = 92.7 bits (196), Expect(2) = 4e-031
Identities = 36/107 (33%), Positives = 63/107 (58%)
Frame = +2 / -3
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I+ A+DR+D+ Y RS +DYLE++ + + +L + SW+ +P++DADFG
Sbjct: 354 AQAIKDAVDRVDDAYVRSVVDYLEVESEKGSQAARGQLMPESDLWVVSWLGMPMYDADFG 175
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKL 544
WG P F+ P + G A+V AN D +++ L+ ++++ F K+
Sbjct: 174 WGTPRFVAPAQMFGSGTAYVTQRANKDDGIAVLFGLEPQYLQCFEKV 34
Score = 63.8 bits (133), Expect(2) = 4e-031
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = +2 / -3
Query: 2 APRFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVI 166
AP STY + AH+W+C+ +AR L P T+L + R L+P LP YFGN I
Sbjct: 579 APGVSTYCAVTAHLWRCMCVARGLAPCSDTRLRVPANVRHRLRPALPRSYFGNAI 415
>gb|CD429838.1|CD429838 ETH1_15_D11.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_15_D11_A002 5', mRNA sequence
Length = 718
Score = 92.7 bits (196), Expect(2) = 3e-030
Identities = 36/107 (33%), Positives = 63/107 (58%)
Frame = +2 / -3
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I+ A+DR+D+ Y RS +DYLE++ + + +L + SW+ +P++DADFG
Sbjct: 437 AQAIKDAVDRVDDAYVRSVVDYLEVESEKGSQAARGQLMPESDLWVVSWLGMPMYDADFG 258
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKL 544
WG P F+ P + G A+V AN D +++ L+ ++++ F K+
Sbjct: 257 WGTPRFVAPAQMFGSGTAYVTQRANKDDGIAVLFGLEPQYLQCFEKV 117
Score = 60.6 bits (126), Expect(2) = 3e-030
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = +2 / -3
Query: 2 APRFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVI 166
AP STY + AH+W+C+ +AR L P T+L + R +P LP YFGN I
Sbjct: 662 APGVSTYCAVTAHLWRCMCVARGLAPCSDTRLRVPANVRHRPRPALPRSYFGNAI 498
>gb|CX615617.1|CX615617 GABR1_21_E12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_21_E12_A002 3', mRNA sequence
Length = 656
Score = 92.7 bits (196), Expect(2) = 2e-028
Identities = 36/107 (33%), Positives = 63/107 (58%)
Frame = +2 / +1
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I+ A+DR+D+ Y RS +DYLE++ + + +L + SW+ +P++DADFG
Sbjct: 202 AQAIKDAVDRVDDAYVRSVVDYLEVESEKGSQAARGQLMPESDLWVVSWLGMPMYDADFG 381
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKL 544
WG P F+ P + G A+V AN D +++ L+ ++++ F K+
Sbjct: 382 WGTPRFVAPAQMFGSGTAYVTQRANKDDGIAVLFGLEPQYLQCFEKV 522
Score = 54.7 bits (113), Expect(2) = 2e-028
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +2 / +1
Query: 29 LAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVI 166
+ AH+W+C+ +AR L P T+L R L+P LP GYFGN I
Sbjct: 4 VTAHLWRCMCVARGLAPCSDTRLRVPAXVRHRLRPALPRGYFGNAI 141
>gb|BG558694.1|BG558694 RHIZ2_59_C03.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 425
Score = 46.4 bits (95), Expect(6) = 6e-025
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +3
Query: 620 SQIKY*SFK*TQWLHFHF 673
SQIKY*SFK*TQWLHFHF
Sbjct: 129 SQIKY*SFK*TQWLHFHF 182
Score = 45.1 bits (92), Expect(6) = 7e-027
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -3 / -1
Query: 560 FKLRRLASGTSPCAQPATR 504
FKLRRLASGTSPCAQPA R
Sbjct: 59 FKLRRLASGTSPCAQPAKR 3
Score = 44.6 bits (91), Expect(6) = 7e-027
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -2 / -2
Query: 672 K*KCSHWVHLKLQYFI*E 619
K*KCSHWVHLKLQYFI E
Sbjct: 181 K*KCSHWVHLKLQYFIWE 128
Score = 42.8 bits (87), Expect(6) = 6e-025
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +1 / +1
Query: 502 YLVAG*AHGEVPEANRRSLN 561
YL AG*AHGEVPEAN RSLN
Sbjct: 1 YLFAG*AHGEVPEANLRSLN 60
Score = 38.2 bits (77), Expect(6) = 7e-027
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1 / -3
Query: 637 SVFYLRIWAEHNPSRPITSSFNSW 566
S+ RIW +H S PIT SFNSW
Sbjct: 144 SILSGRIWVQHKASCPITPSFNSW 73
Score = 34.5 bits (69), Expect(6) = 6e-025
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +1
Query: 560 TVPTVEGGCYWARRIMLCPNS 622
+ PT+EG CY AR ML PNS
Sbjct: 67 SAPTIEGWCYRARGFMLYPNS 129
Score = 32.7 bits (65), Expect(6) = 7e-027
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1 / -2
Query: 799 RACYWSLFLTMIFYYVSSYNFYPF 728
R CYWSLFLTM F PF
Sbjct: 379 RVCYWSLFLTMSFTMFLHRKCLPF 308
Score = 31.8 bits (63), Expect(6) = 6e-025
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2 / +1
Query: 665 FHFEDLQRKFMVTSFC 712
F FEDLQ KFM T FC
Sbjct: 175 FTFEDLQSKFMATYFC 222
Score = 26.3 bits (51), Expect(6) = 7e-027
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 712 TK*SDHEFPLQVFK 671
TK S HEF LQVFK
Sbjct: 222 TKVSGHEFTLQVFK 181
Score = 24.4 bits (47), Expect(6) = 6e-025
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +2
Query: 761 KNHC*EQTPIAGS 799
K HC EQ PIA S
Sbjct: 341 KTHCKEQAPIANS 379
Score = 22.6 bits (43), Expect(6) = 6e-025
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2 / +1
Query: 713 EINYRERVEI 742
+INYRERV+I
Sbjct: 292 KINYRERVDI 321
Score = 22.6 bits (43), Expect(6) = 7e-027
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1 / -3
Query: 742 NFYPFSIINLT 710
N YPFSII+L+
Sbjct: 321 NVYPFSIIDLS 289
>gb|CW099235.1|CW099235 104_466_11003441_116_34380_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11003441, DNA
sequence
Length = 629
Score = 79.0 bits (166), Expect(2) = 9e-027
Identities = 29/68 (42%), Positives = 45/68 (66%)
Frame = +2 / -1
Query: 350 NLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHME 529
+L SWV + ++ ADFGWG P FMGP + Y G +V+ +A +G+L++ +SL+ E M
Sbjct: 377 HLRAISWVGMSLYKADFGWGAPAFMGPALMYYSGFVYVMNAAGKEGALALVLSLEPETMP 198
Query: 530 KFRKLIGE 553
+FRK+ E
Sbjct: 197 EFRKVFAE 174
Score = 62.9 bits (131), Expect(2) = 9e-027
Identities = 30/69 (43%), Positives = 36/69 (52%)
Frame = +2 / -1
Query: 89 TKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEAGKVTSELAEGAAVIQGALDRMDNDY 268
T+LY D R L PPLP GYFGN + + A AG+V AA A +DY
Sbjct: 629 TRLYSMIDMRSRLDPPLPPGYFGNAVVRTSVSATAGEVVGNPVGYAARRALAATSQGDDY 450
Query: 269 CRSALDYLE 295
RS +DYLE
Sbjct: 449 ARSLVDYLE 423
>gb|CW262600.1|CW262600 104_730_11230165_148_35221_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11230165, DNA
sequence
Length = 651
Score = 88.1 bits (186), Expect(3) = 5e-025
Identities = 38/63 (60%), Positives = 43/63 (68%)
Frame = +2 / -1
Query: 92 KLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEAGKVTSELAEGAAVIQGALDRMDNDYC 271
++YC TD Q L PL DGYF NVIFTAT +A KV LA+G AVIQ AL MDNDYC
Sbjct: 507 RIYCGTDR*QRLHLPLLDGYFSNVIFTATSFVKASKVARGLADGVAVIQEALSLMDNDYC 328
Query: 272 RSA 280
+A
Sbjct: 327 PTA 319
Score = 41.4 bits (84), Expect(3) = 5e-025
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +2 / -2
Query: 305 DLSALVRGAHTFRCPNLGLTSWVR 376
+L AL+ GAH ++ PNLGLTSWV+
Sbjct: 290 ELLALIDGAHIYQFPNLGLTSWVQ 219
Score = 24.0 bits (46), Expect(3) = 5e-025
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2 / -1
Query: 14 STYAVLAAHVWKCVSL 61
STY +LA W CVS+
Sbjct: 567 STYDMLAEDAW*CVSV 520
>gb|CW171357.1|CW171357 104_582_11155697_148_36526_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11155697, DNA
sequence
Length = 632
Score = 88.1 bits (186), Expect(3) = 5e-025
Identities = 38/63 (60%), Positives = 43/63 (68%)
Frame = +2 / +2
Query: 92 KLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEAGKVTSELAEGAAVIQGALDRMDNDYC 271
++YC TD Q L PL DGYF NVIFTAT +A KV LA+G AVIQ AL MDNDYC
Sbjct: 209 RIYCGTDR*QRLHLPLLDGYFSNVIFTATSFVKASKVARGLADGVAVIQEALSLMDNDYC 388
Query: 272 RSA 280
+A
Sbjct: 389 PTA 397
Score = 41.4 bits (84), Expect(3) = 5e-025
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +2 / +3
Query: 305 DLSALVRGAHTFRCPNLGLTSWVR 376
+L AL+ GAH ++ PNLGLTSWV+
Sbjct: 426 ELLALIDGAHIYQFPNLGLTSWVQ 497
Score = 24.0 bits (46), Expect(3) = 5e-025
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2 / +2
Query: 14 STYAVLAAHVWKCVSL 61
STY +LA W CVS+
Sbjct: 149 STYDMLAEDAW*CVSV 196
>gb|CW184126.1|CW184126 104_600_11164986_148_36687_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164986, DNA
sequence
Length = 632
Score = 71.6 bits (150), Expect(3) = 5e-025
Identities = 25/63 (39%), Positives = 38/63 (60%)
Frame = +2 / +1
Query: 14 STYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEA 193
ST+ L+A +W+C + R LPPE ++ D R+ ++PPLPD YFGN +F A
Sbjct: 37 STFCTLSALIWQCTCVVRQLPPESEVRIVFPADLRRRMRPPLPDHYFGNAVFRLCATGAA 216
Query: 194 GKV 202
G++
Sbjct: 217 GEI 225
Score = 42.8 bits (87), Expect(3) = 5e-025
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2 / +1
Query: 350 NLGLTSWVRLPIHDADFGWGRPVFM 424
++ +TSW P +DADFGWG+P FM
Sbjct: 373 DMHITSWFGRPQYDADFGWGKPQFM 447
Score = 39.1 bits (79), Expect(3) = 5e-025
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2 / +1
Query: 203 TSELAEGAAVIQGALDRMDNDYCRSALDYLEL 298
T L AA I+GA++RMD++ RSA+DY E+
Sbjct: 229 TVALGSVAARIKGAIERMDDELVRSAIDYFEM 324
>gb|CW315428.1|CW315428 104_806_11472354_116_35824_071 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472354, DNA
sequence
Length = 566
Score = 88.1 bits (186), Expect(3) = 5e-025
Identities = 38/63 (60%), Positives = 43/63 (68%)
Frame = +2 / -2
Query: 92 KLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEAGKVTSELAEGAAVIQGALDRMDNDYC 271
++YC TD Q L PL DGYF NVIFTAT +A KV LA+G AVIQ AL MDNDYC
Sbjct: 301 RIYCGTDR*QRLHLPLLDGYFSNVIFTATSFVKASKVARGLADGVAVIQEALSLMDNDYC 122
Query: 272 RSA 280
+A
Sbjct: 121 PTA 113
Score = 41.4 bits (84), Expect(3) = 5e-025
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +2 / -3
Query: 305 DLSALVRGAHTFRCPNLGLTSWVR 376
+L AL+ GAH ++ PNLGLTSWV+
Sbjct: 84 ELLALIDGAHIYQFPNLGLTSWVQ 13
Score = 24.0 bits (46), Expect(3) = 5e-025
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2 / -2
Query: 14 STYAVLAAHVWKCVSL 61
STY +LA W CVS+
Sbjct: 361 STYDMLAEDAW*CVSV 314
>gb|CX610855.1|CX610855 ANR1_21_E10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_21_E10_A002 3', mRNA sequence
Length = 766
Score = 74.8 bits (157), Expect(2) = 2e-024
Identities = 37/86 (43%), Positives = 46/86 (53%)
Frame = +2 / +2
Query: 8 RFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLA 187
R +T+ L+ VW+ + A L PEQ TKL A DGR+ PPLP GYFGN I LA
Sbjct: 35 RCTTFEALSGLVWRARTKALGLAPEQRTKLLFAVDGRRRFSPPLPRGYFGNGIVLTNALA 214
Query: 188 EAGKVTSELAEGAAVIQGALDRMDND 265
AG++ S AA + RM D
Sbjct: 215 TAGELLSAPVSRAAGLVQEAVRMVTD 292
Score = 58.8 bits (122), Expect(2) = 2e-024
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +2 / +2
Query: 359 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFR 538
+T+W RL H ADFGWG PV GP + + + L S+++ + L A M+ F+
Sbjct: 365 ITTWSRLEFHGADFGWGEPVMSGPVALPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 544
Query: 539 KLIGE 553
+L+ E
Sbjct: 545 ELMDE 559
>gb|CX610480.1|CX610480 ANR1_19_B02.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_19_B02_A002 3', mRNA sequence
Length = 794
Score = 74.8 bits (157), Expect(2) = 5e-024
Identities = 37/86 (43%), Positives = 46/86 (53%)
Frame = +2 / +3
Query: 8 RFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLA 187
R +T+ L+ VW+ + A L PEQ TKL A DGR+ PPLP GYFGN I LA
Sbjct: 63 RCTTFEALSGLVWRARTKALGLAPEQRTKLLFAVDGRRRFSPPLPRGYFGNGIVLTNALA 242
Query: 188 EAGKVTSELAEGAAVIQGALDRMDND 265
AG++ S AA + RM D
Sbjct: 243 TAGELLSAPVSRAAGLVQEAVRMVTD 320
Score = 57.9 bits (120), Expect(2) = 5e-024
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +2 / +3
Query: 359 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFR 538
+T+W RL H ADFGWG PV GP + + + L S+++ + L A M+ F+
Sbjct: 393 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 572
Query: 539 KLIGE 553
+L+ E
Sbjct: 573 ELMDE 587
>gb|CN127986.1|CN127986 RHOH1_26_G01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_26_G01_A002 3', mRNA sequence
Length = 778
Score = 74.8 bits (157), Expect(2) = 5e-024
Identities = 37/86 (43%), Positives = 46/86 (53%)
Frame = +2 / +3
Query: 8 RFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLA 187
R +T+ L+ VW+ + A L PEQ TKL A DGR+ PPLP GYFGN I LA
Sbjct: 78 RCTTFEALSGLVWRARTKALGLAPEQRTKLLFAVDGRRRFSPPLPRGYFGNGIVLTNALA 257
Query: 188 EAGKVTSELAEGAAVIQGALDRMDND 265
AG++ S AA + RM D
Sbjct: 258 TAGELLSAPVSRAAGLVQEAVRMVTD 335
Score = 57.9 bits (120), Expect(2) = 5e-024
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +2 / +3
Query: 359 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFR 538
+T+W RL H ADFGWG PV GP + + + L S+++ + L A M+ F+
Sbjct: 408 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 587
Query: 539 KLIGE 553
+L+ E
Sbjct: 588 ELMDE 602
>gb|CX616799.1|CX616799 GABR1_30_B03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_30_B03_A002 3', mRNA sequence
Length = 746
Score = 74.8 bits (157), Expect(2) = 5e-024
Identities = 37/86 (43%), Positives = 46/86 (53%)
Frame = +2 / +1
Query: 8 RFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLA 187
R +T+ L+ VW+ + A L PEQ TKL A DGR+ PPLP GYFGN I LA
Sbjct: 49 RCTTFEALSGLVWRARTKALGLAPEQRTKLLFAVDGRRRFSPPLPRGYFGNGIVLTNALA 228
Query: 188 EAGKVTSELAEGAAVIQGALDRMDND 265
AG++ S AA + RM D
Sbjct: 229 TAGELLSAPVSRAAGLVQEAVRMVTD 306
Score = 57.9 bits (120), Expect(2) = 5e-024
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +2 / +1
Query: 359 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFR 538
+T+W RL H ADFGWG PV GP + + + L S+++ + L A M+ F+
Sbjct: 379 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 558
Query: 539 KLIGE 553
+L+ E
Sbjct: 559 ELMDE 573
>gb|CX607149.1|CX607149 ANR1_7_A11.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_7_A11_A002 3', mRNA sequence
Length = 708
Score = 74.8 bits (157), Expect(2) = 5e-024
Identities = 37/86 (43%), Positives = 46/86 (53%)
Frame = +2 / +1
Query: 8 RFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLA 187
R +T+ L+ VW+ + A L PEQ TKL A DGR+ PPLP GYFGN I LA
Sbjct: 58 RCTTFEALSGLVWRARTKALGLAPEQRTKLLFAVDGRRRFSPPLPRGYFGNGIVLTNALA 237
Query: 188 EAGKVTSELAEGAAVIQGALDRMDND 265
AG++ S AA + RM D
Sbjct: 238 TAGELLSAPVSRAAGLVQEAVRMVTD 315
Score = 57.9 bits (120), Expect(2) = 5e-024
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +2 / +1
Query: 359 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFR 538
+T+W RL H ADFGWG PV GP + + + L S+++ + L A M+ F+
Sbjct: 388 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 567
Query: 539 KLIGE 553
+L+ E
Sbjct: 568 ELMDE 582
>gb|CX609879.1|CX609879 ANR1_15_G02.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_15_G02_A002 3', mRNA sequence
Length = 708
Score = 74.8 bits (157), Expect(2) = 5e-024
Identities = 37/86 (43%), Positives = 46/86 (53%)
Frame = +2 / +3
Query: 8 RFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLA 187
R +T+ L+ VW+ + A L PEQ TKL A DGR+ PPLP GYFGN I LA
Sbjct: 96 RCTTFEALSGLVWRARTKALGLAPEQRTKLLFAVDGRRRFSPPLPRGYFGNGIVLTNALA 275
Query: 188 EAGKVTSELAEGAAVIQGALDRMDND 265
AG++ S AA + RM D
Sbjct: 276 TAGELLSAPVSRAAGLVQEAVRMVTD 353
Score = 57.9 bits (120), Expect(2) = 5e-024
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +2 / +3
Query: 359 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFR 538
+T+W RL H ADFGWG PV GP + + + L S+++ + L A M+ F+
Sbjct: 426 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 605
Query: 539 KLIGE 553
+L+ E
Sbjct: 606 ELMDE 620
>gb|CW083259.1|CW083259 104_425_10944176_116_32357_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944176, DNA
sequence
Length = 734
Score = 85.4 bits (180), Expect(2) = 6e-024
Identities = 31/83 (37%), Positives = 52/83 (62%)
Frame = +2 / -1
Query: 305 DLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGD 484
D + L +G +L + SW LPI+DADFGWGRP FMG + + GL +++P +GD
Sbjct: 530 DAAGLRKGEWVMPETDLWVISWQGLPIYDADFGWGRPAFMGRACLQFSGLVYLVPGPDGD 351
Query: 485 GSLSIAISLQAEHMEKFRKLIGE 553
G L + ++++ + + +F++L E
Sbjct: 350 GRLDVVVAMEPKSLARFKELFYE 282
Score = 46.9 bits (96), Expect(2) = 6e-024
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +2 / -1
Query: 128 QPPLPDGYFGNVIFTATPLAEAGKVTSELAEGAA 229
+PPLP+GY GN IF A+ +A+AG V SE + A
Sbjct: 713 RPPLPEGYLGNAIFRASTVAKAGDVVSEPLDAVA 612
>gb|CW034021.1|CW034021 104_263_10502300_114_30359 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502300, DNA
sequence
Length = 641
Score = 73.5 bits (154), Expect(2) = 1e-023
Identities = 36/84 (42%), Positives = 45/84 (53%)
Frame = +2 / -2
Query: 14 STYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEA 193
+T+ L+ VW+ + A L PEQ TKL A DGR+ PPLP GYFGN I LA A
Sbjct: 637 TTFEALSGLVWRARTKALGLAPEQRTKLLFAVDGRRRFSPPLPRGYFGNGIVLTNALATA 458
Query: 194 GKVTSELAEGAAVIQGALDRMDND 265
G++ S AA + RM D
Sbjct: 457 GELLSAPVSRAAGLVQEAVRMVTD 386
Score = 57.9 bits (120), Expect(2) = 1e-023
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +2 / -2
Query: 359 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFR 538
+T+W RL H ADFGWG PV GP + + + L S+++ + L A M+ F+
Sbjct: 313 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 134
Query: 539 KLIGE 553
+L+ E
Sbjct: 133 ELMDE 119
>gb|CW502316.1|CW502316 fsbb001f298j11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f298j11, DNA
sequence
Length = 520
Score = 67.5 bits (141), Expect(2) = 1e-023
Identities = 26/66 (39%), Positives = 41/66 (62%)
Frame = +2 / +1
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I+ A+DR+D+ Y RS +DYLE++ + + +L + SW+ +P++DADFG
Sbjct: 322 AQAIKDAVDRVDDAYVRSVVDYLEVESEKGSQAARGQLMPESDLWVVSWLGMPMYDADFG 501
Query: 404 WGRPVF 421
WG P F
Sbjct: 502 WGTPRF 519
Score = 63.8 bits (133), Expect(2) = 1e-023
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = +2 / +1
Query: 2 APRFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVI 166
AP STY + AH+W+C+ +AR L P T+L + R L+P LP YFGN I
Sbjct: 97 APGVSTYCAVTAHLWRCMCVARGLAPCSDTRLRVPANVRHRLRPALPRSYFGNAI 261
>gb|CW087130.1|CW087130 104_431_10947425_114_33024_071 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10947425, DNA
sequence
Length = 578
Score = 84.9 bits (179), Expect(2) = 2e-023
Identities = 36/94 (38%), Positives = 51/94 (54%)
Frame = +2 / -3
Query: 14 STYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEA 193
+T+ LA VW + A + P + +KL A DGR PPLP GYFGN I + A
Sbjct: 525 TTFEALAGXVWSARTRALGMRPSRRSKLLFAVDGRPRFSPPLPAGYFGNAIVLTSAACPA 346
Query: 194 GKVTSELAEGAAVIQGALDRMDNDYCRSALDYLE 295
G++ S L +++GA + + Y RSA+DY E
Sbjct: 345 GELASSLPRAVRLVRGAAAAVTDVYMRSAVDYFE 244
Score = 45.5 bits (93), Expect(2) = 2e-023
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2 / -3
Query: 359 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDG 487
+T+W RLP ADFGWG P GP + + +A L G
Sbjct: 204 ITAWSRLPFRAADFGWGSPAACGPAALPEKEVALFLSCGEEGG 76
>gb|CX606141.1|CX606141 ANR1_1_H04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_H04_A002 3', mRNA sequence
Length = 716
Score = 69.8 bits (146), Expect(2) = 1e-022
Identities = 35/79 (44%), Positives = 42/79 (53%)
Frame = +2 / +3
Query: 29 LAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEAGKVTS 208
L+ VW+ + A L PEQ TKL A DGR+ PPLP GYFGN I LA AG++ S
Sbjct: 6 LSGLVWRARTKALGLAPEQRTKLLFAVDGRRRFSPPLPRGYFGNGIVLTNALATAGELLS 185
Query: 209 ELAEGAAVIQGALDRMDND 265
AA + RM D
Sbjct: 186 APVSRAAGLVQEAVRMVTD 242
Score = 57.9 bits (120), Expect(2) = 1e-022
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +2 / +3
Query: 359 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFR 538
+T+W RL H ADFGWG PV GP + + + L S+++ + L A M+ F+
Sbjct: 315 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 494
Query: 539 KLIGE 553
+L+ E
Sbjct: 495 ELMDE 509
>gb|CX607227.1|CX607227 ANR1_7_H10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_7_H10_A002 3', mRNA sequence
Length = 634
Score = 68.9 bits (144), Expect(2) = 3e-022
Identities = 34/75 (45%), Positives = 40/75 (53%)
Frame = +2 / +1
Query: 41 VWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEAGKVTSELAE 220
VW+ + A L PEQ TKL A DGR+ PPLP GYFGN I LA AG++ S
Sbjct: 7 VWRARTKALGLAPEQRTKLLFAVDGRRRFSPPLPRGYFGNGIVLTNALATAGELLSAPVS 186
Query: 221 GAAVIQGALDRMDND 265
AA + RM D
Sbjct: 187 RAAGLVQEAVRMVTD 231
Score = 57.9 bits (120), Expect(2) = 3e-022
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +2 / +1
Query: 359 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFR 538
+T+W RL H ADFGWG PV GP + + + L S+++ + L A M+ F+
Sbjct: 304 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 483
Query: 539 KLIGE 553
+L+ E
Sbjct: 484 ELMDE 498
>gb|CN151897.1|CN151897 WOUND1_78_H11.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_78_H11_A002 3', mRNA sequence
Length = 654
Score = 68.4 bits (143), Expect(2) = 4e-022
Identities = 34/79 (43%), Positives = 42/79 (53%)
Frame = +2 / +2
Query: 29 LAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEAGKVTS 208
L+ +W+ + A L PEQ TKL A DGR+ PPLP GYFGN I LA AG++ S
Sbjct: 5 LSGLLWRARTKALGLAPEQRTKLLFAVDGRRRFSPPLPRGYFGNGIVLTNALATAGELLS 184
Query: 209 ELAEGAAVIQGALDRMDND 265
AA + RM D
Sbjct: 185 APVSRAAGLVQEAVRMVTD 241
Score = 57.9 bits (120), Expect(2) = 4e-022
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +2 / +2
Query: 359 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFR 538
+T+W RL H ADFGWG PV GP + + + L S+++ + L A M+ F+
Sbjct: 314 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 493
Query: 539 KLIGE 553
+L+ E
Sbjct: 494 ELMDE 508
>gb|CW054283.1|CW054283 104_294_10516424_115_30183 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10516424, DNA
sequence
Length = 490
Score = 81.7 bits (172), Expect(2) = 4e-022
Identities = 28/68 (41%), Positives = 47/68 (69%)
Frame = +2 / +1
Query: 350 NLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHME 529
+L SW+ + +HD+DFGWG PVFMGP + Y G +V+ + +G++++A+SL+ E M
Sbjct: 202 HLRAISWMGMSLHDSDFGWGAPVFMGPALMYYSGFVYVMQAPGKEGAVALALSLEPESMP 381
Query: 530 KFRKLIGE 553
+FRK+ +
Sbjct: 382 EFRKVFAD 405
Score = 44.6 bits (91), Expect(2) = 4e-022
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +2 / +1
Query: 140 PDGYFGNVIFTATPLAEAGKVTSELAEGAAVIQGALDRMDNDYCRSALDYLE 295
P GYFGN + + LA G+V AA A +DY RS +DYLE
Sbjct: 1 PPGYFGNAVIRTSALATVGEVVGNPVGYAARRALAATSQGDDYARSLVDYLE 156
>gb|CX615267.1|CX615267 GABR1_19_D03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_19_D03_A002 3', mRNA sequence
Length = 690
Score = 67.0 bits (140), Expect(2) = 9e-022
Identities = 33/74 (44%), Positives = 39/74 (52%)
Frame = +2 / +3
Query: 44 WKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEAGKVTSELAEG 223
W+ + A L PEQ TKL A DGR+ PPLP GYFGN I LA AG++ S
Sbjct: 3 WRARTKALGLAPEQRTKLLFAVDGRRRFSPPLPRGYFGNGIVLTNALATAGELLSAPVSR 182
Query: 224 AAVIQGALDRMDND 265
AA + RM D
Sbjct: 183 AAGLVQEAVRMVTD 224
Score = 57.9 bits (120), Expect(2) = 9e-022
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +2 / +3
Query: 359 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFR 538
+T+W RL H ADFGWG PV GP + + + L S+++ + L A M+ F+
Sbjct: 297 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 476
Query: 539 KLIGE 553
+L+ E
Sbjct: 477 ELMDE 491
>gb|CN130798.1|CN130798 RHOH1_43_H02.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_43_H02_A002 5', mRNA sequence
Length = 834
Score = 105 bits (223), Expect = 1e-021
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -2 / -1
Query: 507 EIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASW 385
EIAMDRLPSPFALGRTNARPSYA+PPGPMNTGRPHPKSASW
Sbjct: 834 EIAMDRLPSPFALGRTNARPSYAIPPGPMNTGRPHPKSASW 712
Score = 102 bits (218), Expect = 7e-021
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2 / +2
Query: 383 IHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAI 505
+HDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAI
Sbjct: 710 LHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAI 832
>gb|CW159475.1|CW159475 104_565_11149377_148_36408_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149377, DNA
sequence
Length = 519
Score = 89.0 bits (188), Expect(2) = 3e-021
Identities = 40/94 (42%), Positives = 51/94 (54%)
Frame = +2 / -2
Query: 14 STYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEA 193
ST+ + A VW+C ARSLP + T+L+ D R L PPLP GYFGN + + LA
Sbjct: 389 STFRAVVALVWQCACRARSLPADAETRLFSMVDMRARLAPPLPPGYFGNAVIRTSALATV 210
Query: 194 GKVTSELAEGAAVIQGALDRMDNDYCRSALDYLE 295
G+V AA A +DY RS +DYLE
Sbjct: 209 GEVVGNPVGYAARRALAATSQGDDYARSLVDYLE 108
Score = 34.1 bits (68), Expect(2) = 3e-021
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2 / -2
Query: 350 NLGLTSWVRLPIHDADFGWG 409
+L SW+ + +HD+DFGWG
Sbjct: 62 HLRAISWMGMSLHDSDFGWG 3
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,205,856,976
Number of Sequences: 832831
Number of extensions: 19738969
Number of successful extensions: 138164
Number of sequences better than 1.0e-020: 48
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 28515283680
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)