TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2591258.2.1
(819 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX609214.1|CX609214 ANR1_11_G12.b1_A002 Anaerobic roots ... 244 7e-090
gb|CX609300.1|CX609300 ANR1_11_G12.g1_A002 Anaerobic roots ... 241 6e-076
gb|CW124219.1|CW124219 104_503_11111651_148_34693_034 Sorgh... 181 3e-059
gb|BZ628759.1|BZ628759 ih62b02.g1 WGS-SbicolorF (DH5a methy... 172 2e-057
gb|CW318949.1|CW318949 104_811_11474228_148_35883_074 Sorgh... 172 2e-055
gb|CW249841.1|CW249841 104_711_11223062_116_35044_051 Sorgh... 182 6e-053
gb|CN127238.1|CN127238 RHOH1_21_G07.g3_A002 Acid- and alkal... 148 3e-052
gb|CN127149.1|CN127149 RHOH1_21_G07.b1_A002 Acid- and alkal... 150 1e-051
gb|CN146262.1|CN146262 WOUND1_39_D11.b1_A002 Wounded leaves... 172 9e-050
gb|BG559195.1|BG559195 RHIZ2_55_G08.g1_A003 Rhizome2 (RHIZ2... 181 3e-049
gb|BZ628758.1|BZ628758 ih62b02.b1 WGS-SbicolorF (DH5a methy... 172 2e-048
gb|CN137489.1|CN137489 OX1_57_D04.g1_A002 Oxidatively-stres... 142 3e-048
gb|CN138077.1|CN138077 OX1_61_C04.g1_A002 Oxidatively-stres... 153 7e-048
gb|CN146340.1|CN146340 WOUND1_39_D11.g1_A002 Wounded leaves... 137 8e-047
gb|CW247562.1|CW247562 104_708_11221843_116_35017_070 Sorgh... 166 2e-046
gb|CX612853.1|CX612853 GABR1_4_G09.g1_A002 GA- or brassinol... 133 1e-045
gb|CW463139.1|CW463139 fsbb001f211j12f0 Sorghum methylation... 139 2e-045
gb|BG356843.1|BG356843 OV2_10_F11.g1_A002 Ovary 2 (OV2) Sor... 183 3e-045
gb|CN137990.1|CN137990 OX1_61_C04.b1_A002 Oxidatively-stres... 183 3e-045
gb|CF480279.1|CF480279 POL1_64_F12.g1_A002 Pollen Sorghum b... 182 6e-045
gb|CN128942.1|CN128942 RHOH1_32_C05.g1_A002 Acid- and alkal... 180 2e-044
gb|BE361254.1|BE361254 DG1_70_D12.g1_A002 Dark Grown 1 (DG1... 133 3e-044
gb|CN128863.1|CN128863 RHOH1_32_C05.b1_A002 Acid- and alkal... 178 7e-044
gb|CD429550.1|CD429550 ETH1_14_C02.b1_A002 Ethylene-treated... 177 3e-043
gb|CF428636.1|CF428636 PH1_9_G09.g1_A002 Phosphorous-defici... 113 5e-042
gb|CW180236.1|CW180236 104_594_11160530_116_36635_003 Sorgh... 120 6e-042
gb|CW265394.1|CW265394 104_734_11231851_148_35263_070 Sorgh... 130 3e-041
gb|CD430220.1|CD430220 ETH1_17_C09.g1_A002 Ethylene-treated... 100 1e-040
gb|CF427166.1|CF427166 PH1_4_H04.b1_A002 Phosphorous-defici... 162 7e-039
gb|CX612764.1|CX612764 GABR1_4_G09.b1_A002 GA- or brassinol... 160 3e-038
gb|BG241494.1|BG241494 RHIZ2_50_A05.g1_A003 Rhizome2 (RHIZ2... 159 6e-038
gb|BE125749.1|BE125749 DG1_55_H11.b1_A002 Dark Grown 1 (DG1... 118 1e-037
gb|BE360322.1|BE360322 DG1_62_C12.g1_A002 Dark Grown 1 (DG1... 156 4e-037
gb|CD236128.1|CD236128 SS1_32_B09.b1_A012 Salt-stressed see... 155 8e-037
gb|BE361185.1|BE361185 DG1_70_D12.b1_A002 Dark Grown 1 (DG1... 100 3e-036
gb|CW249842.1|CW249842 104_711_11223062_148_35048_051 Sorgh... 102 6e-036
gb|CD430207.1|CD430207 ETH1_17_H03.g1_A002 Ethylene-treated... 94 5e-034
gb|CF479933.1|CF479933 POL1_62_E11.g1_A002 Pollen Sorghum b... 93 8e-034
gb|CN123933.1|CN123933 RHOH1_1_D01.g1_A002 Acid- and alkali... 104 2e-033
gb|CF433879.1|CF433879 NIT1_30_C03.g1_A002 Nitrogen-deficie... 105 2e-033
gb|CN132666.1|CN132666 OX1_7_B07.g1_A002 Oxidatively-stress... 109 2e-032
gb|BE360918.1|BE360918 DG1_67_F09.g1_A002 Dark Grown 1 (DG1... 130 2e-029
gb|CD229128.1|CD229128 CCC1_13_F11.b1_A007 Callus culture/c... 130 2e-029
gb|CL177459.1|CL177459 104_384_10893845_116_31916_293 Sorgh... 128 1e-028
gb|CF432632.1|CF432632 NIT1_18_G06.b1_A002 Nitrogen-deficie... 95 3e-028
gb|BG101966.1|BG101966 RHIZ2_22_A05.g1_A003 Rhizome2 (RHIZ2... 125 1e-027
gb|CD229208.1|CD229208 CCC1_13_F11.g1_A007 Callus culture/c... 81 2e-026
gb|BE363001.2|BE363001 DG1_92_G01.g1_A002 Dark Grown 1 (DG1... 120 2e-026
gb|CF432712.1|CF432712 NIT1_18_A03.g1_A002 Nitrogen-deficie... 66 8e-026
gb|BE363151.1|BE363151 DG1_9_E08.g1_A002 Dark Grown 1 (DG1)... 111 1e-023
gb|AW282821.1|AW282821 LG1_305_H12.g1_A002 Light Grown 1 (L... 105 9e-022
gb|CW180237.1|CW180237 104_594_11160530_148_36631_003 Sorgh... 103 4e-021
gb|BE356814.1|BE356814 DG1_12_D07.g1_A002 Dark Grown 1 (DG1... 103 4e-021
>gb|CX609214.1|CX609214 ANR1_11_G12.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_G12_A002 3', mRNA sequence
Length = 617
Score = 244 bits (528), Expect(4) = 7e-090
Identities = 102/111 (91%), Positives = 108/111 (97%)
Frame = -3 / +1
Query: 631 TALALPDDGKIVAIDVTRESYDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKG 452
TALALPD+GKIVAIDVTRESYDQIGSPVI+KAGVAHKIDFRVGLALPVLDQMV+EEGNKG
Sbjct: 64 TALALPDNGKIVAIDVTRESYDQIGSPVIDKAGVAHKIDFRVGLALPVLDQMVAEEGNKG 243
Query: 451 KFDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTLWGGSVAAPHDEPLS 299
+FDFAFVDADKVNFLNYHERLLQL+RVGGLIAYDNTLWGGSV A DEPL+
Sbjct: 244 RFDFAFVDADKVNFLNYHERLLQLVRVGGLIAYDNTLWGGSVVASPDEPLA 396
Score = 205 bits (443), Expect(4) = 4e-081
Identities = 90/102 (88%), Positives = 91/102 (89%)
Frame = +3 / -1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T+PPHSVLS*AMRPPTL W*LRKFTLSAST AKSNLPLFPSS TIWSSTGSASP
Sbjct: 368 TEPPHSVLS*AMRPPTLTSCSSRSW*LRKFTLSASTKAKSNLPLFPSSATIWSSTGSASP 189
Query: 507 TRKSILCATPAFSITGDPIWS*LSRVTSMATILPSSGRARAV 632
TRKSILCATPA SITGDPIWS*LSRVTSMATILP SGRARAV
Sbjct: 188 TRKSILCATPALSITGDPIWS*LSRVTSMATILPLSGRARAV 63
Score = 105 bits (224), Expect(5) = 4e-053
Identities = 43/51 (84%), Positives = 48/51 (94%)
Frame = +2 / -3
Query: 461 PLLGNHLVQHGQREPDAEVDLVRHAGLLDHRRPNLVVALAGNVDGHNLAVV 613
PLLG+HLVQH QREPDAEVDLVRHAGL+DHRR LVVALAG+VDGH+LA+V
Sbjct: 234 PLLGHHLVQHRQREPDAEVDLVRHAGLVDHRRSYLVVALAGDVDGHDLAIV 82
Score = 80.8 bits (170), Expect(6) = 1e-046
Identities = 32/44 (72%), Positives = 35/44 (79%)
Frame = -2 / +3
Query: 605 QDCGHRRYPRELRPDWVAGDREGRRGAQDRLPXXXXXXXAGPDG 474
QD GHRR+PRELRPD +AGDR+GRRGAQDRLP AGPDG
Sbjct: 90 QDRGHRRHPRELRPDRIAGDRQGRRGAQDRLPRRARAAGAGPDG 221
Score = 79.0 bits (166), Expect(4) = 4e-081
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +2 / -3
Query: 179 DAAAQREPVGDGDLADVNAGIGGHGRVELPGGRSERAV 292
DAAAQREPVGDGDLADV+AGIGG G VELPGGR ER V
Sbjct: 495 DAAAQREPVGDGDLADVHAGIGGDGGVELPGGRGERLV 382
Score = 78.0 bits (164), Expect(4) = 7e-090
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = -1 / +2
Query: 291 TARSLRPPGSSTRPWPPIPAFTSARSPSPTGSRCAAAS 178
T+RS RPPGSST P PPIPA TSARSPSPTGSRCAAAS
Sbjct: 383 TSRSPRPPGSSTPPSPPIPACTSARSPSPTGSRCAAAS 496
Score = 68.0 bits (142), Expect(5) = 4e-053
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = +2 / -3
Query: 299 GERFVVGRGHGPAPQRVVVGDEAPDPEQLQQP 394
GER V GR HG APQRVVVGDEAPDP+QLQQP
Sbjct: 396 GERLVGGRDHGAAPQRVVVGDEAPDPDQLQQP 301
Score = 53.8 bits (111), Expect(6) = 1e-046
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -3 / +1
Query: 241 DPRVHVCQVAIADGLXLCRRVA 176
DPRVHVCQVAIADGL LCRRVA
Sbjct: 433 DPRVHVCQVAIADGLTLCRRVA 498
Score = 46.9 bits (96), Expect(5) = 4e-053
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +3 / -1
Query: 177 ATRRHSXSPSAMATWQT*TRG 239
ATRRHS SPSAMATWQT TRG
Sbjct: 497 ATRRHSVSPSAMATWQTCTRG 435
Score = 44.6 bits (91), Expect(6) = 1e-046
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = -2 / +3
Query: 410 PQLPRXXXXXAQGRGPHRLRQH 345
PQLPR QGRGPHRLRQH
Sbjct: 285 PQLPRAAAAAGQGRGPHRLRQH 350
Score = 39.6 bits (80), Expect(4) = 4e-081
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = +1 / -3
Query: 55 FHSSPVRYYRPWPFQAQSSQXGSDSP 132
F PVRYY PWPF QSS S P
Sbjct: 600 FSLRPVRYYTPWPFSVQSSVSHSRQP 523
Score = 38.2 bits (77), Expect(4) = 7e-090
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -3 / +2
Query: 685 APRTPSRLASSPGTRCS 635
APRTPSR ASSP TRCS
Sbjct: 11 APRTPSRSASSPATRCS 61
Score = 37.3 bits (75), Expect(6) = 1e-046
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -2 / +1
Query: 686 GAKNAIEVGVFTGYS 642
GAKNA+EVGVFTGYS
Sbjct: 10 GAKNAVEVGVFTGYS 54
Score = 36.8 bits (74), Expect(4) = 4e-081
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3 / -3
Query: 636 EQRVPGEDANLDGVLGAKNL 695
E RV GEDA+LDGVLGA++L
Sbjct: 60 EXRVAGEDADLDGVLGAEHL 1
Score = 35.9 bits (72), Expect(6) = 1e-046
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1 / +2
Query: 342 CGAGPWPRPTTNRSPSGTARSLRP 271
CGA PW RP T+RSP S P
Sbjct: 353 CGAAPWSRPPTSRSPRPPGSSTPP 424
Score = 32.2 bits (64), Expect(5) = 4e-053
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1 / -1
Query: 40 GWGIYFHSSPVRYYRPWPFQAQSSQXGSDSPQLC 141
GW IYF S FQ ++ +DSPQLC
Sbjct: 614 GWWIYFRSDRFVITHHGHFQYRAVSATADSPQLC 513
Score = 31.8 bits (63), Expect(5) = 4e-053
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1 / -1
Query: 637 SSEYPVKTPTSMAFLAP 687
+ E PVKTPTS AFLAP
Sbjct: 59 NXE*PVKTPTSTAFLAP 9
Score = 29.5 bits (58), Expect(4) = 7e-090
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -2 / +2
Query: 107 LCA*NGHGL**RTGL 63
LC NGHG+**RTGL
Sbjct: 548 LCTENGHGV**RTGL 592
Score = 26.7 bits (52), Expect(6) = 1e-046
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -3 / +3
Query: 106 SVLEMAMVCNSE 71
SVL+MAMVCN+E
Sbjct: 549 SVLKMAMVCNNE 584
>gb|CX609300.1|CX609300 ANR1_11_G12.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_G12_A002 5', mRNA sequence
Length = 659
Score = 241 bits (520), Expect(2) = 6e-076
Identities = 101/111 (90%), Positives = 107/111 (96%)
Frame = -3 / +1
Query: 631 TALALPDDGKIVAIDVTRESYDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKG 452
TALALPD+GKIVAIDVTRESYDQIGSPVI+KAGVAHKIDFRV LALPVLDQMV+EEGNKG
Sbjct: 322 TALALPDNGKIVAIDVTRESYDQIGSPVIDKAGVAHKIDFRVRLALPVLDQMVAEEGNKG 501
Query: 451 KFDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTLWGGSVAAPHDEPLS 299
+FDFAFVDADKVNFLNYHERLLQL+RVGGLIAYDNTLWGGSV A DEPL+
Sbjct: 502 RFDFAFVDADKVNFLNYHERLLQLVRVGGLIAYDNTLWGGSVVASPDEPLA 654
Score = 201 bits (434), Expect(2) = 4e-069
Identities = 90/108 (83%), Positives = 91/108 (84%)
Frame = +3 / -1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T+PPHSVLS*AMRPPTL W*LRKFTLSAST AKSNLPLFPSS TIWSSTGSAS
Sbjct: 626 TEPPHSVLS*AMRPPTLTSCSSRSW*LRKFTLSASTKAKSNLPLFPSSATIWSSTGSASL 447
Query: 507 TRKSILCATPAFSITGDPIWS*LSRVTSMATILPSSGRARAVNEQRVP 650
TRKSILCATPA SITGDPIWS*LSRVTSMATILP SGRARAV P
Sbjct: 446 TRKSILCATPALSITGDPIWS*LSRVTSMATILPLSGRARAVASSE*P 303
Score = 105 bits (224), Expect(3) = 4e-049
Identities = 43/51 (84%), Positives = 48/51 (94%)
Frame = +2 / -3
Query: 461 PLLGNHLVQHGQREPDAEVDLVRHAGLLDHRRPNLVVALAGNVDGHNLAVV 613
PLLG+HLVQH QREPDAEVDLVRHAGL+DHRR LVVALAG+VDGH+LA+V
Sbjct: 492 PLLGHHLVQHRQREPDAEVDLVRHAGLVDHRRSYLVVALAGDVDGHDLAIV 340
Score = 81.7 bits (172), Expect(2) = 4e-069
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +3 / -3
Query: 636 EQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGVG 758
EQRV GEDA+LDGVLGA++LDQE QQLHLVRRR HA HGVG
Sbjct: 318 EQRVAGEDADLDGVLGAEHLDQEPQQLHLVRRRRHASHGVG 196
Score = 80.8 bits (170), Expect(4) = 1e-035
Identities = 32/44 (72%), Positives = 35/44 (79%)
Frame = -2 / +3
Query: 605 QDCGHRRYPRELRPDWVAGDREGRRGAQDRLPXXXXXXXAGPDG 474
QD GHRR+PRELRPD +AGDR+GRRGAQDRLP AGPDG
Sbjct: 348 QDRGHRRHPRELRPDRIAGDRQGRRGAQDRLPRQARAAGAGPDG 479
Score = 68.0 bits (142), Expect(3) = 4e-049
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = +2 / -3
Query: 299 GERFVVGRGHGPAPQRVVVGDEAPDPEQLQQP 394
GER V GR HG APQRVVVGDEAPDP+QLQQP
Sbjct: 654 GERLVGGRDHGAAPQRVVVGDEAPDPDQLQQP 559
Score = 65.2 bits (136), Expect(2) = 6e-076
Identities = 29/41 (70%), Positives = 30/41 (73%)
Frame = -2 / +1
Query: 758 THPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
THPMAGMAASPD LGAKNA+EVGVFTGYSLL
Sbjct: 196 THPMAGMAASPDEVQLLGLLIEMLGAKNAVEVGVFTGYSLL 318
Score = 61.6 bits (128), Expect(3) = 4e-049
Identities = 27/46 (58%), Positives = 28/46 (60%)
Frame = +1 / -1
Query: 637 SSEYPVKTPTSMAFLAPXXXXXXXXXXXXXGDAAMPAMGWVRCSCR 774
SSE PVKTPTS AFLAP GDAAMPAMGWV + R
Sbjct: 317 SSE*PVKTPTSTAFLAPSISIRSPSSCTSSGDAAMPAMGWVAVATR 180
Score = 47.3 bits (97), Expect(4) = 1e-035
Identities = 21/42 (50%), Positives = 23/42 (54%)
Frame = -1 / +3
Query: 768 RAPHPPHXXXXXXXXXXXXXXAPDRDSWRQERHRGWRLHRVL 643
R HPPH APDRD+ RQER RG RLHR+L
Sbjct: 186 RHRHPPHGWHGGVAGRGAAAGAPDRDARRQERRRGRRLHRLL 311
Score = 44.6 bits (91), Expect(4) = 1e-035
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = -2 / +3
Query: 410 PQLPRXXXXXAQGRGPHRLRQH 345
PQLPR QGRGPHRLRQH
Sbjct: 543 PQLPRAAAAAGQGRGPHRLRQH 608
Score = 34.5 bits (69), Expect(4) = 1e-035
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / +2
Query: 342 CGAGPWPRPTTNRSP 298
CGA PW RP T+RSP
Sbjct: 611 CGAAPWSRPPTSRSP 655
>gb|CW124219.1|CW124219 104_503_11111651_148_34693_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11111651, DNA
sequence
Length = 594
Score = 181 bits (389), Expect(3) = 3e-059
Identities = 72/130 (55%), Positives = 92/130 (70%)
Frame = -3 / -3
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHER 392
Y +G P+I+KAGVAHK+DFR G AL LD ++++E N G FDFAFVDADK N++ YHE+
Sbjct: 391 YYDLGRPIIDKAGVAHKVDFREGPALEHLDALLADEANHGAFDFAFVDADKPNYVRYHEQ 212
Query: 391 LLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVA 212
LL+L+RVGG + YDNTLW G+VA P D P+S+ ADPRV VCQ+A
Sbjct: 211 LLRLVRVGGAVVYDNTLWDGTVALPPDAPMSDHDRRISAAVRDLNARLSADPRVEVCQLA 32
Query: 211 IADGLXLCRR 182
IADG+ +CRR
Sbjct: 31 IADGVTICRR 2
Score = 77.1 bits (162), Expect(3) = 1e-028
Identities = 39/78 (50%), Positives = 42/78 (53%)
Frame = +3 / +3
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T P HSVLS PPT W LSAST AKSN P SS + S SA P
Sbjct: 147 TVPSHSVLSYTTAPPTRTRRSSCSWYRT*LGLSASTKAKSNAPWLASSASSASRCSSAGP 326
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCATPA S+ G P
Sbjct: 327 SRKSTLCATPALSMMGRP 380
Score = 55.1 bits (114), Expect(3) = 1e-028
Identities = 25/46 (54%), Positives = 30/46 (65%)
Frame = +3 / +2
Query: 603 LPSSGRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSH 740
LP G+ + ++R GEDA+LDGV A LDQ QQL LVRRR H
Sbjct: 419 LPVVGQRQRRGQERAAGEDAHLDGVPRAAQLDQHPQQLRLVRRRRH 556
Score = 47.3 bits (97), Expect(3) = 3e-059
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = -3 / -3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALPDDGK+VA+DV+RE YD
Sbjct: 448 TALALPDDGKVVAVDVSREYYD 383
Score = 40.9 bits (83), Expect(3) = 3e-059
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -2 / -3
Query: 740 MAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
MA PD GA+NAIEVGVFTG SLL
Sbjct: 556 MATPPDEAQLLRMLIKLSGARNAIEVGVFTGCSLL 452
Score = 33.6 bits (67), Expect(3) = 1e-028
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3 / +3
Query: 183 RRHSXSPSAMATWQT*TRG 239
RR +PSAMA+WQT TRG
Sbjct: 3 RRQMVTPSAMASWQTSTRG 59
>gb|BZ628759.1|BZ628759 ih62b02.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih62b02 5', DNA sequence
Length = 645
Score = 172 bits (371), Expect(3) = 2e-057
Identities = 70/131 (53%), Positives = 89/131 (67%)
Frame = -3 / +1
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHER 392
Y IG P IE AGVAHK+DFR G AL LD ++++E N G FDFAFVDADK N++ YHE+
Sbjct: 229 YYDIGRPFIESAGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADKPNYVRYHEQ 408
Query: 391 LLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVA 212
LL+L+RVGG I YDNTLW G+VA P + P+++ D RV VCQ+A
Sbjct: 409 LLRLVRVGGSIVYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKDERVEVCQLA 588
Query: 211 IADGLXLCRRV 179
IADG+ +CRR+
Sbjct: 589 IADGITICRRL 621
Score = 85.4 bits (180), Expect(3) = 2e-023
Identities = 42/79 (53%), Positives = 46/79 (58%)
Frame = +3 / -2
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T P HSVLS M PPTL W LSASTNAKSN P SS + S SA P
Sbjct: 473 TVPAHSVLSYTMLPPTLTRRSSCSWYRT*LGLSASTNAKSNAPWLASSASSASRPSSAGP 294
Query: 507 TRKSILCATPAFSITGDPI 563
+RKS LCATPA S+ G P+
Sbjct: 293 SRKSTLCATPALSMKGRPM 237
Score = 46.0 bits (94), Expect(3) = 2e-057
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3 / +1
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALPDDGK+VA DV+RE YD
Sbjct: 172 TALALPDDGKVVAFDVSREYYD 237
Score = 44.1 bits (90), Expect(3) = 2e-057
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = -2 / +1
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
H M +SPD GA+N +EVGVFTGYSLL
Sbjct: 49 HQWGFMQSSPDEAQLLRMLLKLTGARNTLEVGVFTGYSLL 168
Score = 32.7 bits (65), Expect(3) = 2e-023
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +3 / -2
Query: 567 S*LSRVTSMATILPSSGRARAVNEQRVP 650
S* S +TS AT LPSSGRA AV + P
Sbjct: 236 S*YSLLTSNATTLPSSGRASAVARRE*P 153
Score = 29.9 bits (59), Expect(3) = 2e-023
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / -2
Query: 183 RRHSXSPSAMATWQT*TR 236
RR PSAMA+WQT TR
Sbjct: 617 RRQMVMPSAMASWQTSTR 564
>gb|CW318949.1|CW318949 104_811_11474228_148_35883_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474228, DNA
sequence
Length = 708
Score = 172 bits (371), Expect(3) = 2e-055
Identities = 70/131 (53%), Positives = 89/131 (67%)
Frame = -3 / -2
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHER 392
Y IG P IE AGVAHK+DFR G AL LD ++++E N G FDFAFVDADK N++ YHE+
Sbjct: 572 YYDIGRPFIESAGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADKPNYVRYHEQ 393
Query: 391 LLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVA 212
LL+L+RVGG I YDNTLW G+VA P + P+++ D RV VCQ+A
Sbjct: 392 LLRLVRVGGSIVYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKDERVEVCQLA 213
Query: 211 IADGLXLCRRV 179
IADG+ +CRR+
Sbjct: 212 IADGITICRRL 180
Score = 85.4 bits (180), Expect(3) = 2e-023
Identities = 42/79 (53%), Positives = 46/79 (58%)
Frame = +3 / +1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T P HSVLS M PPTL W LSASTNAKSN P SS + S SA P
Sbjct: 328 TVPAHSVLSYTMLPPTLTRRSSCSWYRT*LGLSASTNAKSNAPWLASSASSASRPSSAGP 507
Query: 507 TRKSILCATPAFSITGDPI 563
+RKS LCATPA S+ G P+
Sbjct: 508 SRKSTLCATPALSMKGRPM 564
Score = 46.0 bits (94), Expect(3) = 2e-055
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3 / -2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALPDDGK+VA DV+RE YD
Sbjct: 629 TALALPDDGKVVAFDVSREYYD 564
Score = 37.3 bits (75), Expect(3) = 2e-055
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -2 / -2
Query: 686 GAKNAIEVGVFTGYSLL 636
GA+N +EVGVFTGYSLL
Sbjct: 683 GARNTLEVGVFTGYSLL 633
Score = 32.7 bits (65), Expect(3) = 2e-023
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +3 / +1
Query: 567 S*LSRVTSMATILPSSGRARAVNEQRVP 650
S* S +TS AT LPSSGRA AV + P
Sbjct: 565 S*YSLLTSNATTLPSSGRASAVARRE*P 648
Score = 29.9 bits (59), Expect(3) = 2e-023
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / +1
Query: 183 RRHSXSPSAMATWQT*TR 236
RR PSAMA+WQT TR
Sbjct: 184 RRQMVMPSAMASWQTSTR 237
>gb|CW249841.1|CW249841 104_711_11223062_116_35044_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223062, DNA
sequence
Length = 683
Score = 182 bits (391), Expect(2) = 6e-053
Identities = 73/131 (55%), Positives = 92/131 (70%)
Frame = -3 / -2
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHER 392
Y G P+I+KAGVAHK+DFR G AL LD ++++E N G FDFAFVDADK N++ YHE+
Sbjct: 622 YYDFGRPIIDKAGVAHKVDFREGPALEHLDALLADEANHGAFDFAFVDADKPNYVRYHEQ 443
Query: 391 LLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVA 212
LL+L+RVGG + YDNTLW G+VA P D P+S+ ADPRV VCQ+A
Sbjct: 442 LLRLVRVGGAVVYDNTLWDGTVALPPDAPMSDHDRRISAAVRDLNARLSADPRVEVCQLA 263
Query: 211 IADGLXLCRRV 179
IADG+ +CRRV
Sbjct: 262 IADGVTICRRV 230
Score = 47.3 bits (97), Expect(2) = 6e-053
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = -3 / -2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALPDDGK+VA+DV+RE YD
Sbjct: 679 TALALPDDGKVVAVDVSREYYD 614
>gb|CN127238.1|CN127238 RHOH1_21_G07.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_G07_A002 5', mRNA sequence
Length = 859
Score = 148 bits (317), Expect(4) = 3e-052
Identities = 57/88 (64%), Positives = 71/88 (80%)
Frame = -3 / +2
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAGVAHKIDFR G ALPVLD ++++E + G FDF FVDAD N+LNYH+RLL
Sbjct: 503 ELGLPCIEKAGVAHKIDFREGPALPVLDDLIADEKDHGSFDFVFVDADXDNYLNYHDRLL 682
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPL 302
+L+++GGLI YDNTLW GSV P D P+
Sbjct: 683 KLVKLGGLIGYDNTLWNGSVVLPDDAPM 766
Score = 90.9 bits (192), Expect(3) = 9e-027
Identities = 45/78 (57%), Positives = 50/78 (64%)
Frame = +3 / -2
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T+P HSVLS* MRPP+ W*LR + SAST KSN P SS S TGSA P
Sbjct: 741 TEPFHSVLS*PMRPPSFTSLSSRSW*LR*LSXSASTKTKSNDPWSFSSAMRSSRTGSAGP 562
Query: 507 TRKSILCATPAFSITGDP 560
+RKSIL ATPAFS+ G P
Sbjct: 561 SRKSILWATPAFSMQGRP 508
Score = 39.6 bits (80), Expect(4) = 3e-052
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DG I+A+D+ RE+Y+
Sbjct: 440 TALALPEDGTILAMDINRENYE 505
Score = 38.2 bits (77), Expect(4) = 3e-052
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -2 / +2
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M S D +GAK +E+GV+TGYSLL
Sbjct: 317 HPWNLMTTSADEGQFLNMLIKLIGAKKTMEIGVYTGYSLL 436
Score = 37.7 bits (76), Expect(4) = 3e-052
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -3 / +2
Query: 235 RVHVCQVAIADGLXLCRRVAKKKY 164
RV +CQ+ + DG+ LCRRV KK+
Sbjct: 788 RVEICQLPVGDGVTLCRRVK*KKH 859
Score = 35.0 bits (70), Expect(3) = 9e-027
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +3 / -2
Query: 567 S*LSRVTSMATILPSSGRARAVNEQRVP 650
S* SR+ SMA I+PSSGRA AV + P
Sbjct: 504 S*FSRLMSMAKIVPSSGRASAVARRE*P 421
Score = 33.6 bits (67), Expect(3) = 9e-027
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2 / -1
Query: 164 VFFFCDAAAQREPVGDGDLADVNA 235
+FF DAAA+ + V DG+LAD++A
Sbjct: 859 MFFSLDAAAEGDAVADGELADLDA 788
>gb|CN127149.1|CN127149 RHOH1_21_G07.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_G07_A002 3', mRNA sequence
Length = 819
Score = 150 bits (323), Expect(4) = 1e-051
Identities = 58/88 (65%), Positives = 72/88 (81%)
Frame = -3 / +2
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAGVAHKIDFR G ALPVLD ++++E + G FDF FVDADK N+LNYH+RLL
Sbjct: 155 ELGLPCIEKAGVAHKIDFREGPALPVLDDLIADEKDHGSFDFVFVDADKDNYLNYHDRLL 334
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPL 302
+L+++GGLI YDNTLW GSV P D P+
Sbjct: 335 KLVKLGGLIGYDNTLWNGSVVLPDDAPM 418
Score = 93.2 bits (197), Expect(3) = 4e-028
Identities = 46/78 (58%), Positives = 51/78 (65%)
Frame = +3 / -1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T+P HSVLS* MRPP+ W*LR +LSAST KSN P SS S TGSA P
Sbjct: 393 TEPFHSVLS*PMRPPSFTSLSSRSW*LR*LSLSASTKTKSNDPWSFSSAMRSSRTGSAGP 214
Query: 507 TRKSILCATPAFSITGDP 560
+RKSIL ATPAFS+ G P
Sbjct: 213 SRKSILWATPAFSMQGRP 160
Score = 39.6 bits (80), Expect(4) = 1e-051
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DG I+A+D+ RE+Y+
Sbjct: 92 TALALPEDGTILAMDINRENYE 157
Score = 37.7 bits (76), Expect(4) = 1e-051
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3 / +2
Query: 235 RVHVCQVAIADGLXLCRRVAKKKYRLSASKCSRA 134
RV +CQ+ + DG+ LCRRV KK L+ + A
Sbjct: 440 RVEICQLPVGDGVTLCRRVK*KKTCLATDGAAAA 541
Score = 35.9 bits (72), Expect(3) = 4e-028
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -3
Query: 152 GG*PVFFFCDAAAQREPVGDGDLADVNA 235
GG FF DAAA+ + V DG+LAD++A
Sbjct: 523 GGQACFFSLDAAAEGDAVADGELADLDA 440
Score = 35.0 bits (70), Expect(3) = 4e-028
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +3 / -1
Query: 567 S*LSRVTSMATILPSSGRARAVNEQRVP 650
S* SR+ SMA I+PSSGRA AV + P
Sbjct: 156 S*FSRLMSMAKIVPSSGRASAVARRE*P 73
Score = 33.6 bits (67), Expect(4) = 1e-051
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -2 / +2
Query: 686 GAKNAIEVGVFTGYSLL 636
GAK +E+GV+TGYSLL
Sbjct: 38 GAKKTMEIGVYTGYSLL 88
>gb|CN146262.1|CN146262 WOUND1_39_D11.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_39_D11_A002 3', mRNA sequence
Length = 713
Score = 172 bits (371), Expect(2) = 9e-050
Identities = 70/131 (53%), Positives = 89/131 (67%)
Frame = -3 / +1
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHER 392
Y IG P IE AGVAHK+DFR G AL LD ++++E N G FDFAFVDADK N++ YHE+
Sbjct: 82 YYDIGRPFIESAGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADKPNYVRYHEQ 261
Query: 391 LLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVA 212
LL+L+RVGG I YDNTLW G+VA P + P+++ D RV VCQ+A
Sbjct: 262 LLRLVRVGGSIVYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKDERVEVCQLA 441
Query: 211 IADGLXLCRRV 179
IADG+ +CRR+
Sbjct: 442 IADGITICRRL 474
Score = 85.4 bits (180), Expect(3) = 2e-023
Identities = 42/79 (53%), Positives = 46/79 (58%)
Frame = +3 / -1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T P HSVLS M PPTL W LSASTNAKSN P SS + S SA P
Sbjct: 326 TVPAHSVLSYTMLPPTLTRRSSCSWYRT*LGLSASTNAKSNAPWLASSASSASRPSSAGP 147
Query: 507 TRKSILCATPAFSITGDPI 563
+RKS LCATPA S+ G P+
Sbjct: 146 SRKSTLCATPALSMKGRPM 90
Score = 46.0 bits (94), Expect(2) = 9e-050
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3 / +1
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALPDDGK+VA DV+RE YD
Sbjct: 25 TALALPDDGKVVAFDVSREYYD 90
Score = 32.7 bits (65), Expect(3) = 2e-023
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +3 / -1
Query: 567 S*LSRVTSMATILPSSGRARAVNEQRVP 650
S* S +TS AT LPSSGRA AV + P
Sbjct: 89 S*YSLLTSNATTLPSSGRASAVARRE*P 6
Score = 29.9 bits (59), Expect(3) = 2e-023
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / -1
Query: 183 RRHSXSPSAMATWQT*TR 236
RR PSAMA+WQT TR
Sbjct: 470 RRQMVMPSAMASWQTSTR 417
>gb|BG559195.1|BG559195 RHIZ2_55_G08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 449
Score = 181 bits (390), Expect(2) = 3e-049
Identities = 73/129 (56%), Positives = 90/129 (69%)
Frame = -3 / +1
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAGVAHKIDFR G ALPVLD ++++E N G FDF FVDADK N+LNYHERLL
Sbjct: 58 ELGLPCIEKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHERLL 237
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIA 206
+L+++GGLI YDNTLW GSV P D P+ + AD RV +CQ+ +
Sbjct: 238 KLVKLGGLIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADERVEICQLPVG 417
Query: 205 DGLXLCRRV 179
DG+ LCRRV
Sbjct: 418 DGVTLCRRV 444
Score = 96.8 bits (205), Expect(3) = 2e-024
Identities = 47/78 (60%), Positives = 52/78 (66%)
Frame = +3 / -1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T+P HSVLS* MRPP+ W*LR +LSAST KSN P F SS S TGSA P
Sbjct: 296 TEPFHSVLS*PMRPPSFTSLSSRSW*LR*LSLSASTKTKSNDPWFFSSAMRSSRTGSAGP 117
Query: 507 TRKSILCATPAFSITGDP 560
+RKSIL ATPAFS+ G P
Sbjct: 116 SRKSILWATPAFSMQGRP 63
Score = 35.4 bits (71), Expect(2) = 3e-049
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = -3 / +1
Query: 625 LALPDDGKIVAIDVTRESYD 566
LALP+DG I+A+D+ RE+Y+
Sbjct: 1 LALPEDGTILAMDINRENYE 60
Score = 30.9 bits (61), Expect(3) = 2e-024
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3 / -1
Query: 567 S*LSRVTSMATILPSSGRA 623
S* SR+ SMA I+PSSGRA
Sbjct: 59 S*FSRLMSMAKIVPSSGRA 3
Score = 23.5 bits (45), Expect(3) = 2e-024
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3 / -1
Query: 180 TRRHSXSPSAMATWQT*TR 236
TRR +PS +WQ TR
Sbjct: 443 TRRQRVTPSPTGSWQISTR 387
>gb|BZ628758.1|BZ628758 ih62b02.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih62b02 5', DNA sequence
Length = 564
Score = 172 bits (371), Expect(2) = 2e-048
Identities = 70/131 (53%), Positives = 89/131 (67%)
Frame = -3 / -1
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHER 392
Y IG P IE AGVAHK+DFR G AL LD ++++E N G FDFAFVDADK N++ YHE+
Sbjct: 513 YYDIGRPFIESAGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADKPNYVRYHEQ 334
Query: 391 LLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVA 212
LL+L+RVGG I YDNTLW G+VA P + P+++ D RV VCQ+A
Sbjct: 333 LLRLVRVGGSIVYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKDERVEVCQLA 154
Query: 211 IADGLXLCRRV 179
IADG+ +CRR+
Sbjct: 153 IADGITICRRL 121
Score = 85.4 bits (180), Expect(3) = 3e-022
Identities = 42/79 (53%), Positives = 46/79 (58%)
Frame = +3 / +2
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T P HSVLS M PPTL W LSASTNAKSN P SS + S SA P
Sbjct: 269 TVPAHSVLSYTMLPPTLTRRSSCSWYRT*LGLSASTNAKSNAPWLASSASSASRPSSAGP 448
Query: 507 TRKSILCATPAFSITGDPI 563
+RKS LCATPA S+ G P+
Sbjct: 449 SRKSTLCATPALSMKGRPM 505
Score = 41.8 bits (85), Expect(2) = 2e-048
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3 / -1
Query: 625 LALPDDGKIVAIDVTRESYD 566
LALPDDGK+VA DV+RE YD
Sbjct: 564 LALPDDGKVVAFDVSREYYD 505
Score = 29.9 bits (59), Expect(3) = 3e-022
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / +2
Query: 183 RRHSXSPSAMATWQT*TR 236
RR PSAMA+WQT TR
Sbjct: 125 RRQMVMPSAMASWQTSTR 178
Score = 28.6 bits (56), Expect(3) = 3e-022
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3 / +2
Query: 567 S*LSRVTSMATILPSSGRA 623
S* S +TS AT LPSSGRA
Sbjct: 506 S*YSLLTSNATTLPSSGRA 562
>gb|CN137489.1|CN137489 OX1_57_D04.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_57_D04_A002 5', mRNA sequence
Length = 786
Score = 142 bits (304), Expect(3) = 3e-048
Identities = 56/92 (60%), Positives = 71/92 (77%)
Frame = -3 / +2
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHER 392
Y IG P IE AGVAHK+DFR G AL LD ++++E N G FDFAFVDADK N++ YHE+
Sbjct: 461 YYDIGRPFIESAGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADKPNYVRYHEQ 640
Query: 391 LLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSE 296
LL+L+RVGG I YDNTLW G+VA P + P+++
Sbjct: 641 LLRLVRVGGSIVYDNTLWAGTVALPPETPMND 736
Score = 46.0 bits (94), Expect(3) = 3e-048
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALPDDGK+VA DV+RE YD
Sbjct: 404 TALALPDDGKVVAFDVSREYYD 469
Score = 44.1 bits (90), Expect(3) = 3e-048
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = -2 / +2
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
H M +SPD GA+N +EVGVFTGYSLL
Sbjct: 281 HQWGFMQSSPDEAQLLRMLLKLTGARNTLEVGVFTGYSLL 400
>gb|CN138077.1|CN138077 OX1_61_C04.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_61_C04_A002 5', mRNA sequence
Length = 809
Score = 153 bits (328), Expect(3) = 7e-048
Identities = 59/88 (67%), Positives = 72/88 (81%)
Frame = -3 / +2
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAGVAHKIDFR G ALPVLD ++++E N G FDF FVDADK N+LNYH+RLL
Sbjct: 509 ELGLPCIEKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLL 688
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPL 302
+L+++GGLI YDNTLW GSV P D P+
Sbjct: 689 KLVKLGGLIGYDNTLWNGSVVLPDDAPM 772
Score = 96.8 bits (205), Expect(2) = 8e-024
Identities = 47/78 (60%), Positives = 52/78 (66%)
Frame = +3 / -3
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T+P HSVLS* MRPP+ W*LR +LSAST KSN P F SS S TGSA P
Sbjct: 747 TEPFHSVLS*PMRPPSFTSLSSRSW*LR*LSLSASTKTKSNDPWFFSSAMRSSRTGSAGP 568
Query: 507 TRKSILCATPAFSITGDP 560
+RKSIL ATPAFS+ G P
Sbjct: 567 SRKSILWATPAFSMQGRP 514
Score = 39.6 bits (80), Expect(3) = 7e-048
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DG I+A+D+ RE+Y+
Sbjct: 446 TALALPEDGTILAMDINRENYE 511
Score = 38.2 bits (77), Expect(3) = 7e-048
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -2 / +2
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M S D +GAK +E+GV+TGYSLL
Sbjct: 323 HPWNLMTTSADEGQFLNMLIKLIGAKKTMEIGVYTGYSLL 442
Score = 35.0 bits (70), Expect(2) = 8e-024
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +3 / -3
Query: 567 S*LSRVTSMATILPSSGRARAVNEQRVP 650
S* SR+ SMA I+PSSGRA AV + P
Sbjct: 510 S*FSRLMSMAKIVPSSGRASAVARRE*P 427
>gb|CN146340.1|CN146340 WOUND1_39_D11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_39_D11_A002 5', mRNA sequence
Length = 719
Score = 137 bits (293), Expect(3) = 8e-047
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = -3 / +1
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHER 392
Y IG P IE AGVAHK+DFR G AL LD ++++E N G FDFAFVDADK N++ YHE+
Sbjct: 463 YYDIGRPFIESAGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADKPNYVRYHEQ 642
Query: 391 LLQLLRVGGLIAYDNTLWGGSVAAP 317
LL+L+RVGG I YDNTLW G+VA P
Sbjct: 643 LLRLVRVGGSIVYDNTLWAGTVALP 717
Score = 46.0 bits (94), Expect(3) = 8e-047
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3 / +1
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALPDDGK+VA DV+RE YD
Sbjct: 406 TALALPDDGKVVAFDVSREYYD 471
Score = 44.1 bits (90), Expect(3) = 8e-047
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = -2 / +1
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
H M +SPD GA+N +EVGVFTGYSLL
Sbjct: 283 HQWGFMQSSPDEAQLLRMLLKLTGARNTLEVGVFTGYSLL 402
>gb|CW247562.1|CW247562 104_708_11221843_116_35017_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221843, DNA
sequence
Length = 570
Score = 166 bits (356), Expect(2) = 2e-046
Identities = 70/128 (54%), Positives = 88/128 (68%)
Frame = -3 / -2
Query: 562 IGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLLQ 383
+G PV+ +AGVAHK+DFR GLA LD +++ E N G FDFAFVDADK ++ YHERLL+
Sbjct: 482 LGLPVLTRAGVAHKVDFREGLASEHLDALLAAESNLGAFDFAFVDADKESYGGYHERLLR 303
Query: 382 LLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIAD 203
L+ VGG++AYDNTLWGGSVA P D PL++ AD RV V Q+ +AD
Sbjct: 302 LVLVGGVLAYDNTLWGGSVAFPDDAPLTDDDREVRDHIRAFNAVIAADARVEVVQLPVAD 123
Query: 202 GLXLCRRV 179
G+ LCRRV
Sbjct: 122 GITLCRRV 99
Score = 41.4 bits (84), Expect(2) = 2e-046
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = -3 / -2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALA+P DG++VAIDV+RE +D
Sbjct: 548 TALAIPPDGRVVAIDVSREDFD 483
>gb|CX612853.1|CX612853 GABR1_4_G09.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_4_G09_A002 5', mRNA sequence
Length = 732
Score = 133 bits (284), Expect(3) = 1e-045
Identities = 54/85 (63%), Positives = 65/85 (76%)
Frame = -3 / +3
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHER 392
Y IG P IE AGVAHK+DFR G AL LD ++++E N G FDFAFVDAD N++ YHE+
Sbjct: 477 YYDIGRPFIESAGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDAD*PNYVRYHEQ 656
Query: 391 LLQLLRVGGLIAYDNTLWGGSVAAP 317
LL+L+RVGG I YDNTLW G+VA P
Sbjct: 657 LLRLVRVGGSIVYDNTLWAGTVALP 731
Score = 46.0 bits (94), Expect(3) = 1e-045
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALPDDGK+VA DV+RE YD
Sbjct: 420 TALALPDDGKVVAFDVSREYYD 485
Score = 44.1 bits (90), Expect(3) = 1e-045
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = -2 / +3
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
H M +SPD GA+N +EVGVFTGYSLL
Sbjct: 297 HQWGFMQSSPDEAQLLRMLLKLTGARNTLEVGVFTGYSLL 416
>gb|CW463139.1|CW463139 fsbb001f211j12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f211j12, DNA
sequence
Length = 739
Score = 139 bits (298), Expect(3) = 2e-045
Identities = 56/88 (63%), Positives = 70/88 (79%)
Frame = -3 / +3
Query: 562 IGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLLQ 383
+G PV+ +AGVAHK+DFR GLA LD +++ E N G FDFAFVDADK ++ YHERLL+
Sbjct: 474 LGLPVLTRAGVAHKVDFREGLASEHLDALLAAESNLGAFDFAFVDADKESYGGYHERLLR 653
Query: 382 LLRVGGLIAYDNTLWGGSVAAPHDEPLS 299
L+ VGG++AYDNTLWGGSVA P D PL+
Sbjct: 654 LVLVGGVLAYDNTLWGGSVAFPDDAPLT 737
Score = 41.8 bits (85), Expect(3) = 2e-045
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -2 / +3
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
H +++ PD GA+N IEVGVFTGYS+L
Sbjct: 285 HSSGFISSPPDSAALLAMLLKLTGARNTIEVGVFTGYSVL 404
Score = 41.4 bits (84), Expect(3) = 2e-045
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALA+P DG++VAIDV+RE +D
Sbjct: 408 TALAIPPDGRVVAIDVSREDFD 473
>gb|BG356843.1|BG356843 OV2_10_F11.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 541
Score = 183 bits (394), Expect = 3e-045
Identities = 76/144 (52%), Positives = 96/144 (66%)
Frame = -3 / +1
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAGVAHKIDFR G ALPVLD ++++E N G FDF FVDADK N+LNYH+RLL
Sbjct: 22 ELGLPCIEKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLL 201
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIA 206
+L+++GGLI YDNTLW GSV P D P+ + AD RV +CQ+ +
Sbjct: 202 KLVKLGGLIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADERVEICQLPVG 381
Query: 205 DGLXLCRRVAKKKYRLSASKCSRA 134
DG+ LCRRV KK L+ + A
Sbjct: 382 DGVTLCRRVK*KKTCLATDGAAAA 453
Score = 96.8 bits (205), Expect(2) = 9e-022
Identities = 47/78 (60%), Positives = 52/78 (66%)
Frame = +3 / -3
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T+P HSVLS* MRPP+ W*LR +LSAST KSN P F SS S TGSA P
Sbjct: 260 TEPFHSVLS*PMRPPSFTSLSSRSW*LR*LSLSASTKTKSNDPWFFSSAMRSSRTGSAGP 81
Query: 507 TRKSILCATPAFSITGDP 560
+RKSIL ATPAFS+ G P
Sbjct: 80 SRKSILWATPAFSMQGRP 27
Score = 28.1 bits (55), Expect(2) = 9e-022
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3 / -3
Query: 168 FFFATRRHSXSPSAMATWQT*TR 236
FF TRR +PS +WQ TR
Sbjct: 419 FFHLTRRQRVTPSPTGSWQISTR 351
>gb|CN137990.1|CN137990 OX1_61_C04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_61_C04_A002 3', mRNA sequence
Length = 716
Score = 183 bits (394), Expect = 3e-045
Identities = 76/144 (52%), Positives = 96/144 (66%)
Frame = -3 / +3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAGVAHKIDFR G ALPVLD ++++E N G FDF FVDADK N+LNYH+RLL
Sbjct: 30 ELGLPCIEKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLL 209
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIA 206
+L+++GGLI YDNTLW GSV P D P+ + AD RV +CQ+ +
Sbjct: 210 KLVKLGGLIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADERVEICQLPVG 389
Query: 205 DGLXLCRRVAKKKYRLSASKCSRA 134
DG+ LCRRV KK L+ + A
Sbjct: 390 DGVTLCRRVK*KKTCLATDGAAAA 461
Score = 96.8 bits (205), Expect(2) = 9e-022
Identities = 47/78 (60%), Positives = 52/78 (66%)
Frame = +3 / -2
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T+P HSVLS* MRPP+ W*LR +LSAST KSN P F SS S TGSA P
Sbjct: 268 TEPFHSVLS*PMRPPSFTSLSSRSW*LR*LSLSASTKTKSNDPWFFSSAMRSSRTGSAGP 89
Query: 507 TRKSILCATPAFSITGDP 560
+RKSIL ATPAFS+ G P
Sbjct: 88 SRKSILWATPAFSMQGRP 35
Score = 28.1 bits (55), Expect(2) = 9e-022
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3 / -2
Query: 168 FFFATRRHSXSPSAMATWQT*TR 236
FF TRR +PS +WQ TR
Sbjct: 427 FFHLTRRQRVTPSPTGSWQISTR 359
>gb|CF480279.1|CF480279 POL1_64_F12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_F12_A002 5', mRNA sequence
Length = 649
Score = 182 bits (392), Expect = 6e-045
Identities = 76/144 (52%), Positives = 95/144 (65%)
Frame = -3 / -3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAGVAHKIDFR G ALPVLD ++++E N G FDF FVDADK N+LNYH+RLL
Sbjct: 617 ELGLPCIEKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLL 438
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIA 206
+L ++GGLI YDNTLW GSV P D P+ + AD RV +CQ+ +
Sbjct: 437 KLAKLGGLIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADERVEICQLPVG 258
Query: 205 DGLXLCRRVAKKKYRLSASKCSRA 134
DG+ LCRRV KK L+ + A
Sbjct: 257 DGVTLCRRVK*KKTCLATDGAAAA 186
Score = 96.8 bits (205), Expect(2) = 9e-022
Identities = 47/78 (60%), Positives = 52/78 (66%)
Frame = +3 / +1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T+P HSVLS* MRPP+ W*LR +LSAST KSN P F SS S TGSA P
Sbjct: 379 TEPFHSVLS*PMRPPSFASLSSRSW*LR*LSLSASTKTKSNDPWFFSSAMRSSRTGSAGP 558
Query: 507 TRKSILCATPAFSITGDP 560
+RKSIL ATPAFS+ G P
Sbjct: 559 SRKSILWATPAFSMQGRP 612
Score = 28.1 bits (55), Expect(2) = 9e-022
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3 / +1
Query: 168 FFFATRRHSXSPSAMATWQT*TR 236
FF TRR +PS +WQ TR
Sbjct: 220 FFHLTRRQRVTPSPTGSWQISTR 288
>gb|CN128942.1|CN128942 RHOH1_32_C05.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_32_C05_A002 5', mRNA sequence
Length = 826
Score = 180 bits (388), Expect = 2e-044
Identities = 73/134 (54%), Positives = 92/134 (68%)
Frame = -3 / +2
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAGVAHKIDFR G ALPVLD ++++E N G FDF FVDADK N+LNYH+RLL
Sbjct: 383 ELGLPCIEKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLL 562
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIA 206
+L+++GGLI YDNTLW GSV P D P+ + AD RV +CQ+ +
Sbjct: 563 KLVKLGGLIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADERVEICQLPVG 742
Query: 205 DGLXLCRRVAKKKY 164
D + LCRRV KK+
Sbjct: 743 DSVTLCRRVK*KKH 784
>gb|BE361254.1|BE361254 DG1_70_D12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 408
Score = 133 bits (286), Expect(3) = 3e-044
Identities = 51/82 (62%), Positives = 66/82 (80%)
Frame = -3 / +2
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHER 392
Y +G P+I+KAGVAHK+DFR G AL LD ++++E N G FDFAFVDADK N++ YHE+
Sbjct: 161 YYDLGRPIIDKAGVAHKVDFREGPALEHLDALLADEANHGAFDFAFVDADKPNYVRYHEQ 340
Query: 391 LLQLLRVGGLIAYDNTLWGGSV 326
LL+L+RVGG + YDNTLW G+V
Sbjct: 341 LLRLVRVGGAVVYDNTLWDGTV 406
Score = 77.1 bits (162), Expect(2) = 5e-023
Identities = 39/78 (50%), Positives = 42/78 (53%)
Frame = +3 / -1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T P HSVLS PPT W LSAST AKSN P SS + S SA P
Sbjct: 405 TVPSHSVLSYTTAPPTRTRRSSCSWYRT*LGLSASTKAKSNAPWLASSASSASRCSSAGP 226
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCATPA S+ G P
Sbjct: 225 SRKSTLCATPALSMMGRP 172
Score = 51.9 bits (107), Expect(2) = 5e-023
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +3 / -3
Query: 603 LPSSGRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRR 734
LP G+ + ++R GEDA+LDGV A LDQ QQL LVRRR
Sbjct: 133 LPVVGQRQRRGQERAAGEDAHLDGVPRAAQLDQHPQQLRLVRRR 2
Score = 47.3 bits (97), Expect(3) = 3e-044
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALPDDGK+VA+DV+RE YD
Sbjct: 104 TALALPDDGKVVAVDVSREYYD 169
Score = 37.3 bits (75), Expect(3) = 3e-044
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -2 / +2
Query: 728 PDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
PD GA+NAIEVGVFTG SLL
Sbjct: 8 PDEAQLLRMLIKLSGARNAIEVGVFTGCSLL 100
>gb|CN128863.1|CN128863 RHOH1_32_C05.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_32_C05_A002 3', mRNA sequence
Length = 752
Score = 178 bits (384), Expect = 7e-044
Identities = 73/134 (54%), Positives = 92/134 (68%)
Frame = -3 / +2
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAGVAHKIDFR G ALPVLD ++++E N G FDF FVDADK N+LNYH+RLL
Sbjct: 137 ELGLPCIEKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLL 316
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIA 206
+L+++GGLI YDNTLW GSV P D P+ + AD RV + Q+ +
Sbjct: 317 KLVKLGGLIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADERVEISQLPVG 496
Query: 205 DGLXLCRRVAKKKY 164
DG+ LCRRV KK+
Sbjct: 497 DGVTLCRRVK*KKH 538
Score = 96.8 bits (205), Expect(2) = 9e-025
Identities = 47/78 (60%), Positives = 52/78 (66%)
Frame = +3 / -3
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T+P HSVLS* MRPP+ W*LR +LSAST KSN P F SS S TGSA P
Sbjct: 375 TEPFHSVLS*PMRPPSFTSLSSRSW*LR*LSLSASTKTKSNDPWFFSSAMRSSRTGSAGP 196
Query: 507 TRKSILCATPAFSITGDP 560
+RKSIL ATPAFS+ G P
Sbjct: 195 SRKSILWATPAFSMQGRP 142
Score = 38.2 bits (77), Expect(2) = 9e-025
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2 / -2
Query: 164 VFFFCDAAAQREPVGDGDLADVNAGIGGHGRVE 262
+FF DAAA+ + V DG+L D++A +GG VE
Sbjct: 538 MFFSLDAAAEGDAVPDGELGDLDALVGGERLVE 440
>gb|CD429550.1|CD429550 ETH1_14_C02.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_14_C02_A002 3', mRNA sequence
Length = 604
Score = 177 bits (380), Expect = 3e-043
Identities = 74/138 (53%), Positives = 92/138 (66%)
Frame = -3 / +3
Query: 547 IEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLLQLLRVG 368
IEKAGVAHKIDFR G ALPVLD ++++E N G FDF FVDADK N+LNYH+RLL+L+++G
Sbjct: 6 IEKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLLKLVKLG 185
Query: 367 GLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIADGLXLC 188
GLI YDNTLW GSV P D P+ + AD RV +CQ+ + DG+ LC
Sbjct: 186 GLIGYDNTLWNGSVVLPDDAPMRKYVRFYRDFVLVLNKALAADERVEICQLPVGDGVTLC 365
Query: 187 RRVAKKKYRLSASKCSRA 134
RRV KK L+ + A
Sbjct: 366 RRVK*KKTCLATDGAAAA 419
>gb|CF428636.1|CF428636 PH1_9_G09.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_9_G09_A002 5', mRNA sequence
Length = 756
Score = 113 bits (241), Expect(4) = 5e-042
Identities = 44/67 (65%), Positives = 55/67 (82%)
Frame = -3 / +2
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAGVAHKIDFR G ALPVLD ++++E N G FDF FVDAD N+LNYH+RLL
Sbjct: 512 ELGLPCIEKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADXDNYLNYHDRLL 691
Query: 385 QLLRVGG 365
+L++ GG
Sbjct: 692 KLVKAGG 712
Score = 39.6 bits (80), Expect(4) = 5e-042
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DG I+A+D+ RE+Y+
Sbjct: 449 TALALPEDGTILAMDINRENYE 514
Score = 38.2 bits (77), Expect(4) = 5e-042
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -2 / +2
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M S D +GAK +E+GV+TGYSLL
Sbjct: 326 HPWNLMTTSADEGQFLNMLIKLIGAKKTMEIGVYTGYSLL 445
Score = 37.7 bits (76), Expect(4) = 5e-042
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -3 / +3
Query: 376 RVGGLIAYDNTLWGGSV 326
++GGLI YDNTLW GSV
Sbjct: 702 KLGGLIGYDNTLWNGSV 752
>gb|CW180236.1|CW180236 104_594_11160530_116_36635_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11160530, DNA
sequence
Length = 688
Score = 120 bits (257), Expect(3) = 6e-042
Identities = 49/76 (64%), Positives = 59/76 (77%)
Frame = -3 / +3
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHER 392
Y IG P IE AGVAHK+DFR G AL LD ++++E N G FDFAFVDADK N++ YHE+
Sbjct: 459 YYDIGRPFIESAGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADKPNYVRYHEQ 638
Query: 391 LLQLLRVGGLIAYDNT 344
LL+L+RVGG I YDNT
Sbjct: 639 LLRLVRVGGSIVYDNT 686
Score = 46.0 bits (94), Expect(3) = 6e-042
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALPDDGK+VA DV+RE YD
Sbjct: 402 TALALPDDGKVVAFDVSREYYD 467
Score = 44.1 bits (90), Expect(3) = 6e-042
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = -2 / +3
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
H M +SPD GA+N +EVGVFTGYSLL
Sbjct: 279 HQWGFMQSSPDEAQLLRMLLKLTGARNTLEVGVFTGYSLL 398
>gb|CW265394.1|CW265394 104_734_11231851_148_35263_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11231851, DNA
sequence
Length = 649
Score = 130 bits (278), Expect(2) = 3e-041
Identities = 54/112 (48%), Positives = 69/112 (61%)
Frame = -3 / -1
Query: 469 EEGNKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXX 290
+E N G FDF FVDADK N+LNYH+RLL+L+++GGLI YDNTLW GSV P D P+ +
Sbjct: 448 QEKNHGSFDFVFVDADKDNYLNYHDRLLKLVKLGGLIGYDNTLWNGSVVLPDDAPMRKYI 269
Query: 289 XXXXXXXXXXXXXXXADPRVHVCQVAIADGLXLCRRVAKKKYRLSASKCSRA 134
AD RV +CQ+ + DG+ LCRRV KK L+ + A
Sbjct: 268 RFYRDFVLVLNKALAADERVEICQLPVGDGVTLCRRVK*KKTCLATDGAAAA 113
Score = 60.2 bits (125), Expect(2) = 3e-041
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = -3 / -1
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNK 455
++G P IEKAGVAHKIDFR G ALPVLD ++++ NK
Sbjct: 625 ELGLPCIEKAGVAHKIDFREGPALPVLDDLIADVRNK 515
>gb|CD430220.1|CD430220 ETH1_17_C09.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_17_C09_A002 5', mRNA sequence
Length = 744
Score = 100 bits (212), Expect(4) = 1e-040
Identities = 41/68 (60%), Positives = 51/68 (75%)
Frame = -3 / +3
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHER 392
Y IG P IE AGVAHK+DFR G AL LD ++++E N G FDFAFVDAD N++ YHE+
Sbjct: 486 YYDIGRPFIESAGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADXPNYVRYHEQ 665
Query: 391 LLQLLRVG 368
LL+L+R G
Sbjct: 666 LLRLVRGG 689
Score = 46.0 bits (94), Expect(4) = 1e-040
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALPDDGK+VA DV+RE YD
Sbjct: 429 TALALPDDGKVVAFDVSREYYD 494
Score = 46.0 bits (94), Expect(4) = 1e-040
Identities = 20/41 (48%), Positives = 23/41 (56%)
Frame = -2 / +3
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLLV 633
H M +SPD GA+N +EVGVFTGYSLLV
Sbjct: 306 HQWGFMQSSPDEAQLLRMLLKLTGARNTLEVGVFTGYSLLV 428
Score = 32.2 bits (64), Expect(4) = 1e-040
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -3 / +1
Query: 373 VGGLIAYDNTLWGGS 329
VGG I YDNTLW G+
Sbjct: 685 VGGSIVYDNTLWAGT 729
>gb|CF427166.1|CF427166 PH1_4_H04.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_4_H04_A002 3', mRNA sequence
Length = 573
Score = 162 bits (348), Expect = 7e-039
Identities = 67/131 (51%), Positives = 85/131 (64%)
Frame = -3 / +2
Query: 526 HKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDN 347
HKIDFR G ALPVLD ++++E N G FDF FVDADK N+LNYH+RLL+L+++GGLI YDN
Sbjct: 2 HKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLLKLVKLGGLIGYDN 181
Query: 346 TLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIADGLXLCRRVAKKK 167
TLW GSV P D P+ + AD RV +CQ+ + DG+ LCRRV KK
Sbjct: 182 TLWNGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADERVEICQLPVGDGVTLCRRVK*KK 361
Query: 166 YRLSASKCSRA 134
L+ + A
Sbjct: 362 TCLATDGAAAA 394
>gb|CX612764.1|CX612764 GABR1_4_G09.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_4_G09_A002 3', mRNA sequence
Length = 661
Score = 160 bits (343), Expect = 3e-038
Identities = 64/120 (53%), Positives = 83/120 (69%)
Frame = -3 / +2
Query: 538 AGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLI 359
AGVAHK+DFR G AL LD ++++E N G FDFAFVDADK N++ YHE+LL+L+RVGG I
Sbjct: 5 AGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADKPNYVRYHEQLLRLVRVGGSI 184
Query: 358 AYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIADGLXLCRRV 179
YDNTLW G+VA P + P+++ D RV VCQ+AIADG+ +CRR+
Sbjct: 185 VYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKDERVEVCQLAIADGITICRRL 364
>gb|BG241494.1|BG241494 RHIZ2_50_A05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 526
Score = 159 bits (341), Expect = 6e-038
Identities = 64/120 (53%), Positives = 83/120 (69%)
Frame = -3 / +2
Query: 538 AGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLI 359
AGVAHK+DFR G AL LD ++++E N G FDFAFVDADK N++ YHE+LL+L+RVGG I
Sbjct: 5 AGVAHKVDFREGPALYGLDALLADEANHGAFDFAFVDADKPNYVRYHEQLLRLVRVGGSI 184
Query: 358 AYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIADGLXLCRRV 179
YDNTLW G+VA P + P+++ D RV VCQ+AIADG+ +CRR+
Sbjct: 185 VYDNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKDERVEVCQLAIADGITICRRL 364
>gb|BE125749.1|BE125749 DG1_55_H11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 464
Score = 118 bits (252), Expect(3) = 1e-037
Identities = 46/68 (67%), Positives = 58/68 (85%)
Frame = -3 / +1
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAGVAHKIDFR G ALPVLD ++++E N G FDF FVDADK N+LNYH+RLL
Sbjct: 259 ELGLPCIEKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLL 438
Query: 385 QLLRVGGL 362
+L+++GGL
Sbjct: 439 KLVKLGGL 462
Score = 39.6 bits (80), Expect(3) = 1e-037
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = -3 / +1
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DG I+A+D+ RE+Y+
Sbjct: 196 TALALPEDGTILAMDINRENYE 261
Score = 38.2 bits (77), Expect(3) = 1e-037
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -2 / +1
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M S D +GAK +E+GV+TGYSLL
Sbjct: 73 HPWNLMTTSADEGQFLNMLIKLIGAKKTMEIGVYTGYSLL 192
>gb|BE360322.1|BE360322 DG1_62_C12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 572
Score = 156 bits (335), Expect = 4e-037
Identities = 65/129 (50%), Positives = 83/129 (64%)
Frame = -3 / +1
Query: 520 IDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTL 341
IDFR G ALPVLD ++++E N G FDF FVDADK N+LNYH+RLL+L+++GGLI YDNTL
Sbjct: 1 IDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLLKLVKLGGLIGYDNTL 180
Query: 340 WGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIADGLXLCRRVAKKKYR 161
W GSV P D P+ + AD RV +CQ+ + DG+ LCRRV KK
Sbjct: 181 WNGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADERVEICQLPVGDGVTLCRRVK*KKTC 360
Query: 160 LSASKCSRA 134
L+ + A
Sbjct: 361 LATDGAAAA 387
>gb|CD236128.1|CD236128 SS1_32_B09.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_32_B09_A012 3', mRNA sequence
Length = 591
Score = 155 bits (333), Expect = 8e-037
Identities = 62/118 (52%), Positives = 81/118 (68%)
Frame = -3 / +3
Query: 532 VAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLIAY 353
VAHK+DFR G AL LD ++++E N G FDFAFVDADK N++ YHE+LL+L+RVGG I Y
Sbjct: 3 VAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADKPNYVRYHEQLLRLVRVGGSIVY 182
Query: 352 DNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIADGLXLCRRV 179
DNTLW G+VA P + P+++ D RV VCQ+AIADG+ +CRR+
Sbjct: 183 DNTLWAGTVALPPETPMNDLDRRFSAAIKDLNVRLSKDERVEVCQLAIADGITICRRL 356
>gb|BE361185.1|BE361185 DG1_70_D12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 532
Score = 100 bits (214), Expect(3) = 3e-036
Identities = 39/65 (60%), Positives = 52/65 (80%)
Frame = -3 / +3
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHER 392
Y +G P+I+KAGVAHK+DFR G AL LD ++++E N G FDFAFVDADK N++ YHE+
Sbjct: 336 YYDLGRPIIDKAGVAHKVDFREGPALEHLDALLADEANHGAFDFAFVDADKPNYVRYHEQ 515
Query: 391 LLQLL 377
LL+L+
Sbjct: 516 LLRLV 530
Score = 47.3 bits (97), Expect(3) = 3e-036
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALPDDGK+VA+DV+RE YD
Sbjct: 279 TALALPDDGKVVAVDVSREYYD 344
Score = 43.2 bits (88), Expect(3) = 3e-036
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +3
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
H MA PD GA+NAIEVGVFTG SLL
Sbjct: 156 HERRNMATPPDEAQLLRMLIKLSGARNAIEVGVFTGCSLL 275
>gb|CW249842.1|CW249842 104_711_11223062_148_35048_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223062, DNA
sequence
Length = 695
Score = 102 bits (217), Expect(3) = 6e-036
Identities = 40/67 (59%), Positives = 53/67 (79%)
Frame = -3 / +1
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHER 392
Y +G P+I+KAGVAHK+DFR G AL LD ++++E N G FDFAFVDAD N++ YHE+
Sbjct: 493 YYDLGRPIIDKAGVAHKVDFREGPALEHLDALLADEANHGAFDFAFVDADXPNYVRYHEQ 672
Query: 391 LLQLLRV 371
LL+L+RV
Sbjct: 673 LLRLVRV 693
Score = 47.3 bits (97), Expect(3) = 6e-036
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = -3 / +1
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALPDDGK+VA+DV+RE YD
Sbjct: 436 TALALPDDGKVVAVDVSREYYD 501
Score = 40.9 bits (83), Expect(3) = 6e-036
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -2 / +1
Query: 740 MAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
MA PD GA+NAIEVGVFTG SLL
Sbjct: 328 MATPPDEAQLLRMLIKLSGARNAIEVGVFTGCSLL 432
>gb|CD430207.1|CD430207 ETH1_17_H03.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_17_H03_A002 5', mRNA sequence
Length = 681
Score = 94.1 bits (199), Expect(3) = 5e-034
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = -3 / +3
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHER 392
Y IG P IE AGVAHK+DFR G AL LD ++++E N G FDFAFVDAD N++ YHE+
Sbjct: 492 YYDIGRPFIESAGVAHKVDFREGPALDGLDALLADEANHGAFDFAFVDADXPNYVRYHEQ 671
Query: 391 LLQ 383
LL+
Sbjct: 672 LLR 680
Score = 46.0 bits (94), Expect(3) = 5e-034
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALPDDGK+VA DV+RE YD
Sbjct: 435 TALALPDDGKVVAFDVSREYYD 500
Score = 44.1 bits (90), Expect(3) = 5e-034
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = -2 / +3
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
H M +SPD GA+N +EVGVFTGYSLL
Sbjct: 312 HQWGFMQSSPDEAQLLRMLLKLTGARNTLEVGVFTGYSLL 431
>gb|CF479933.1|CF479933 POL1_62_E11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_62_E11_A002 5', mRNA sequence
Length = 651
Score = 93.2 bits (197), Expect(4) = 8e-034
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = -3 / +3
Query: 469 EEGNKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTLWGGSVAAPHDEPL 302
+E N G FDF FVDADK N+LNYH+RLL +GGLI YDNTLW GSV P D P+
Sbjct: 423 DEKNHGSFDFVFVDADKDNYLNYHDRLLSW*SLGGLIGYDNTLWNGSVVLPDDAPM 590
Score = 39.6 bits (80), Expect(4) = 8e-034
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = -3 / +1
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DG I+A+D+ RE+Y+
Sbjct: 259 TALALPEDGTILAMDINRENYE 324
Score = 38.2 bits (77), Expect(4) = 8e-034
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -2 / +1
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M S D +GAK +E+GV+TGYSLL
Sbjct: 136 HPWNLMTTSADEGQFLNMLIKLIGAKKTMEIGVYTGYSLL 255
Score = 29.9 bits (59), Expect(4) = 8e-034
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -3 / +1
Query: 565 QIGSPVIEKAGVAHK 521
++G P IEKAGVAHK
Sbjct: 322 ELGLPCIEKAGVAHK 366
>gb|CN123933.1|CN123933 RHOH1_1_D01.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_1_D01_A002 5', mRNA sequence
Length = 702
Score = 104 bits (222), Expect(3) = 2e-033
Identities = 41/61 (67%), Positives = 50/61 (81%)
Frame = -3 / +1
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAGVAHKIDFR G ALPVLD ++++E N G FDF FVDAD N+LNYH+RLL
Sbjct: 520 ELGLPCIEKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADXDNYLNYHDRLL 699
Query: 385 Q 383
+
Sbjct: 700 K 702
Score = 39.6 bits (80), Expect(3) = 2e-033
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = -3 / +1
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DG I+A+D+ RE+Y+
Sbjct: 457 TALALPEDGTILAMDINRENYE 522
Score = 38.2 bits (77), Expect(3) = 2e-033
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -2 / +1
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M S D +GAK +E+GV+TGYSLL
Sbjct: 334 HPWNLMTTSADEGQFLNMLIKLIGAKKTMEIGVYTGYSLL 453
>gb|CF433879.1|CF433879 NIT1_30_C03.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_30_C03_A002 5', mRNA sequence
Length = 670
Score = 105 bits (223), Expect(3) = 2e-033
Identities = 41/60 (68%), Positives = 49/60 (81%)
Frame = -3 / +1
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAGV HKIDFR G ALPVLD ++++E N G FDF FVDADK N+LNYH+RLL
Sbjct: 490 ELGLPCIEKAGVTHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYHDRLL 669
Score = 39.1 bits (79), Expect(3) = 2e-033
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3 / +1
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DG ++A+D+ RE+Y+
Sbjct: 427 TALALPEDGTVLAMDINRENYE 492
Score = 38.2 bits (77), Expect(3) = 2e-033
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -2 / +1
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M S D +GAK +E+GV+TGYSLL
Sbjct: 304 HPWNLMTTSADEGQFLNMLIKLIGAKKTMEIGVYTGYSLL 423
>gb|CN132666.1|CN132666 OX1_7_B07.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_7_B07_A002 5', mRNA sequence
Length = 773
Score = 109 bits (233), Expect(3) = 2e-032
Identities = 44/89 (49%), Positives = 57/89 (64%)
Frame = -3 / +2
Query: 433 VDADKVNFLNYHERLLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXX 254
+DADK N+LNYH+RLL+L+++GGLI YDNTLW GSV P D P+ +
Sbjct: 491 MDADKDNYLNYHDRLLKLVKLGGLIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLVLNK 670
Query: 253 XXXADPRVHVCQVAIADGLXLCRRVAKKK 167
AD RV +CQ+ + DG+ LCRRV KK
Sbjct: 671 ALAADERVEICQLPVGDGVTLCRRVK*KK 757
Score = 38.2 bits (77), Expect(3) = 2e-032
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -2 / +2
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M S D +GAK +E+GV+TGYSLL
Sbjct: 329 HPWNLMTTSADEGQFLNMLIKLIGAKKTMEIGVYTGYSLL 448
Score = 34.1 bits (68), Expect(3) = 2e-032
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESY 569
TALALP+DG I+A+D +++Y
Sbjct: 452 TALALPEDGTILAMDADKDNY 514
>gb|BE360918.1|BE360918 DG1_67_F09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 586
Score = 130 bits (279), Expect = 2e-029
Identities = 54/113 (47%), Positives = 70/113 (61%)
Frame = -3 / +1
Query: 472 SEEGNKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSEX 293
++E N G FDF FVDADK N+LNYH+RLL+L+++GGLI YDNTLW GSV P D P+ +
Sbjct: 79 ADEKNHGSFDFVFVDADKDNYLNYHDRLLKLVKLGGLIGYDNTLWNGSVVLPDDAPMRKY 258
Query: 292 XXXXXXXXXXXXXXXXADPRVHVCQVAIADGLXLCRRVAKKKYRLSASKCSRA 134
AD RV +CQ+ + DG+ LCRRV KK L+ + A
Sbjct: 259 IRFYRDFVLVLNKALAADERVEICQLPVGDGVTLCRRVK*KKTCLATDGAAAA 417
>gb|CD229128.1|CD229128 CCC1_13_F11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_13_F11_A007 3', mRNA sequence
Length = 542
Score = 130 bits (279), Expect = 2e-029
Identities = 54/113 (47%), Positives = 70/113 (61%)
Frame = -3 / +2
Query: 472 SEEGNKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSEX 293
++E N G FDF FVDADK N+LNYH+RLL+L+++GGLI YDNTLW GSV P D P+ +
Sbjct: 2 ADEKNHGSFDFVFVDADKDNYLNYHDRLLKLVKLGGLIGYDNTLWNGSVVLPDDAPMRKY 181
Query: 292 XXXXXXXXXXXXXXXXADPRVHVCQVAIADGLXLCRRVAKKKYRLSASKCSRA 134
AD RV +CQ+ + DG+ LCRRV KK L+ + A
Sbjct: 182 IRFYRDFVLVLNKALAADERVEICQLPVGDGVTLCRRVK*KKTCLATDGAAAA 340
>gb|CL177459.1|CL177459 104_384_10893845_116_31916_293 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10893845, DNA
sequence
Length = 545
Score = 128 bits (274), Expect = 1e-028
Identities = 50/97 (51%), Positives = 65/97 (67%)
Frame = -3 / +3
Query: 469 EEGNKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXX 290
+E N G FDFAFVDADK N++ YHE+LL+L+RVGG I YDNTLW G+VA P + P+++
Sbjct: 3 DEANHGAFDFAFVDADKPNYVRYHEQLLRLVRVGGSIVYDNTLWAGTVALPPETPMNDLD 182
Query: 289 XXXXXXXXXXXXXXXADPRVHVCQVAIADGLXLCRRV 179
D RV VCQ+AIADG+ +CRR+
Sbjct: 183 RRFSAAIKDLNVRLSKDERVEVCQLAIADGITICRRL 293
>gb|CF432632.1|CF432632 NIT1_18_G06.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_18_G06_A002 3', mRNA sequence
Length = 610
Score = 95.5 bits (202), Expect(2) = 3e-028
Identities = 40/63 (63%), Positives = 45/63 (71%)
Frame = -3 / +1
Query: 553 PVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLLQLLR 374
P IEKAGVAHKIDFR G ALPVLD ++++E N G FDF FVDADK N+LNY Q
Sbjct: 4 PCIEKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDADKDNYLNYPRPAAQAGE 183
Query: 373 VGG 365
GG
Sbjct: 184 AGG 192
Score = 51.5 bits (106), Expect(2) = 3e-028
Identities = 28/64 (43%), Positives = 32/64 (50%)
Frame = -1 / +3
Query: 342 CGAGPWPRPTTNRSPSGTARSLRPPGSSTRPWPPIPAFTSARSPSPTGSRCAAASQKKNT 163
CG PTT S +A + SSTR PP A SA SPS T S AAAS +K
Sbjct: 216 CGTALSCSPTTPPCASTSASTATSCSSSTRRSPPTSASRSASSPSATASPSAAASSEKKH 395
Query: 162 GYPP 151
+PP
Sbjct: 396 AWPP 407
>gb|BG101966.1|BG101966 RHIZ2_22_A05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 546
Score = 125 bits (267), Expect = 1e-027
Identities = 49/94 (52%), Positives = 63/94 (67%)
Frame = -3 / +1
Query: 460 NKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXX 281
N G FDFAFVDADK N++ YHE+LL+L+RVGG I YDNTLW G+VA P + P+++
Sbjct: 1 NHGAFDFAFVDADKPNYVRYHEQLLRLVRVGGSIVYDNTLWAGTVALPPETPMNDLDRRF 180
Query: 280 XXXXXXXXXXXXADPRVHVCQVAIADGLXLCRRV 179
D RV VCQ+AIADG+ +CRR+
Sbjct: 181 SAAIKDLNVRLSKDERVEVCQLAIADGITICRRL 282
>gb|CD229208.1|CD229208 CCC1_13_F11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_13_F11_A007 5', mRNA sequence
Length = 653
Score = 80.8 bits (170), Expect(3) = 2e-026
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = -3 / +1
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDA 425
++G P IEKAGVAHKIDFR G ALPVLD ++++E N G FDF FVDA
Sbjct: 511 ELGLPCIEKAGVAHKIDFREGPALPVLDDLIADEKNHGSFDFVFVDA 651
Score = 39.6 bits (80), Expect(3) = 2e-026
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = -3 / +1
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DG I+A+D+ RE+Y+
Sbjct: 448 TALALPEDGTILAMDINRENYE 513
Score = 38.2 bits (77), Expect(3) = 2e-026
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -2 / +1
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M S D +GAK +E+GV+TGYSLL
Sbjct: 325 HPWNLMTTSADEGQFLNMLIKLIGAKKTMEIGVYTGYSLL 444
>gb|BE363001.2|BE363001 DG1_92_G01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 519
Score = 120 bits (257), Expect = 2e-026
Identities = 47/90 (52%), Positives = 61/90 (67%)
Frame = -3 / +1
Query: 448 FDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXX 269
FDFAFVDADK N++ YHE+LL+L+RVGG I YDNTLW G+VA P + P+++
Sbjct: 4 FDFAFVDADKPNYVRYHEQLLRLVRVGGSIVYDNTLWAGTVALPPETPMNDLDRRFSAAI 183
Query: 268 XXXXXXXXADPRVHVCQVAIADGLXLCRRV 179
D RV VCQ+AIADG+ +CRR+
Sbjct: 184 KDLNVRLSKDERVEVCQLAIADGITICRRL 273
>gb|CF432712.1|CF432712 NIT1_18_A03.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_18_A03_A002 5', mRNA sequence
Length = 631
Score = 66.1 bits (138), Expect(3) = 8e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -3 / +3
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFV 431
Y IG P IE AGVAHK+DFR AL LD ++++E N G FDFAFV
Sbjct: 489 YYDIGRPFIESAGVAHKVDFRERPALDGLDALLADEANHGAFDFAFV 629
Score = 46.0 bits (94), Expect(3) = 8e-026
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALPDDGK+VA DV+RE YD
Sbjct: 432 TALALPDDGKVVAFDVSREYYD 497
Score = 44.1 bits (90), Expect(3) = 8e-026
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = -2 / +3
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
H M +SPD GA+N +EVGVFTGYSLL
Sbjct: 309 HQWGFMQSSPDEAQLLRMLLKLTGARNTLEVGVFTGYSLL 428
>gb|BE363151.1|BE363151 DG1_9_E08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 440
Score = 111 bits (238), Expect = 1e-023
Identities = 44/90 (48%), Positives = 57/90 (63%)
Frame = -3 / +2
Query: 472 SEEGNKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSEX 293
++E N G FDF FVDADK N+LNYH+RLL+L+++GGLI YDNTLW GSV P D P+ +
Sbjct: 170 ADEKNHGSFDFVFVDADKDNYLNYHDRLLKLVKLGGLIGYDNTLWNGSVVLPDDAPMRKY 349
Query: 292 XXXXXXXXXXXXXXXXADPRVHVCQVAIAD 203
AD RV +CQ+ + D
Sbjct: 350 IRFYRDFVLVLNKALAADERVEICQLPVGD 439
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 801,755,674
Number of Sequences: 832831
Number of extensions: 10894816
Number of successful extensions: 212692
Number of sequences better than 1.0e-020: 61
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 25901382676
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)