TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2591032.2.1
(735 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN134750.1|CN134750 OX1_28_E12.b1_A002 Oxidatively-stres... 313 5e-086
gb|CF489387.1|CF489387 POL1_57_F11.b1_A002 Pollen Sorghum b... 310 1e-085
gb|CW365891.1|CW365891 fsbb001f038k04k0 Sorghum methylation... 310 1e-085
gb|CW365890.1|CW365890 fsbb001f038k04f0 Sorghum methylation... 310 1e-085
gb|CW353450.1|CW353450 fsbb001f016d09f0 Sorghum methylation... 309 2e-083
gb|BG103243.1|BG103243 RHIZ2_19_H12.g1_A003 Rhizome2 (RHIZ2... 305 6e-082
gb|CX606300.1|CX606300 ANR1_2_F08.b1_A002 Anaerobic roots S... 295 3e-081
gb|CD209113.1|CD209113 HS1_46_A12.b1_A012 Heat-shocked seed... 300 2e-080
gb|CF489555.1|CF489555 POL1_58_F10.b1_A002 Pollen Sorghum b... 282 2e-077
gb|BE597334.1|BE597334 PI1_72_B09.g1_A002 Pathogen induced ... 257 1e-069
gb|AW565318.1|AW565318 LG1_342_A06.g1_A002 Light Grown 1 (L... 255 5e-069
gb|CW363768.1|CW363768 fsbb001f035i09k0 Sorghum methylation... 259 3e-068
gb|CW176244.1|CW176244 104_589_11158384_148_36680_062 Sorgh... 248 7e-065
gb|CW105163.1|CW105163 104_474_11012772_116_34453_042 Sorgh... 246 3e-064
gb|CW403691.1|CW403691 fsbb001f095i13k0 Sorghum methylation... 246 3e-064
gb|CN149831.1|CN149831 WOUND1_65_D05.b1_A002 Wounded leaves... 246 3e-064
gb|BF705043.1|BF705043 RHIZ2_1_F10.g1_A003 Rhizome2 (RHIZ2)... 235 5e-063
gb|CN147521.1|CN147521 WOUND1_50_F12.b1_A002 Wounded leaves... 236 4e-061
gb|CW223651.1|CW223651 104_659_11203029_148_37186_085 Sorgh... 137 6e-060
gb|BF422042.1|BF422042 FM1_12_C02.g1_A003 Floral-Induced Me... 222 4e-057
gb|CW073807.1|CW073807 104_340_10781623_116_31470_103 Sorgh... 220 3e-056
gb|BG357481.1|BG357481 OV2_30_D12.g1_A002 Ovary 2 (OV2) Sor... 213 4e-056
gb|CW308233.1|CW308233 104_796_11468560_116_35731_054 Sorgh... 217 2e-055
gb|BE594970.1|BE594970 PI1_48_B08.g1_A002 Pathogen induced ... 210 3e-055
gb|AW923900.1|AW923900 WS1_30_E12.b1_A002 Water-stressed 1 ... 188 3e-055
gb|CN126293.1|CN126293 RHOH1_16_G04.b1_A002 Acid- and alkal... 207 3e-054
gb|CF074385.1|CF074385 FE1_24_H07.b1_A002 Iron-deficient se... 202 6e-053
gb|CX613644.1|CX613644 GABR1_9_H06.b1_A002 GA- or brassinol... 195 2e-051
gb|CD427064.1|CD427064 SA1_17_G05.b1_A002 Salicylic acid-tr... 202 4e-051
gb|BG052508.1|BG052508 RHIZ2_26_A04.g1_A003 Rhizome2 (RHIZ2... 200 2e-050
gb|CN126382.1|CN126382 RHOH1_16_G04.g1_A002 Acid- and alkal... 198 8e-050
gb|CW311717.1|CW311717 104_801_11470377_116_36277_041 Sorgh... 138 2e-049
gb|CF485574.1|CF485574 POL1_32_G12.b1_A002 Pollen Sorghum b... 189 5e-049
gb|BF480784.1|BF480784 FM1_14_H09.g1_A003 Floral-Induced Me... 182 3e-047
gb|CD423436.1|CD423436 SA1_23_C04.b1_A002 Salicylic acid-tr... 181 2e-046
gb|CW403690.1|CW403690 fsbb001f095i13f0 Sorghum methylation... 160 2e-046
gb|CN147606.1|CN147606 WOUND1_50_F12.g1_A002 Wounded leaves... 182 7e-045
gb|CW088288.1|CW088288 104_433_10948097_114_32572_075 Sorgh... 123 9e-045
gb|CW088290.1|CW088290 104_433_10948097_250_32620_075 Sorgh... 123 9e-045
gb|BE596005.1|BE596005 PI1_51_B03.g1_A002 Pathogen induced ... 178 7e-044
gb|BM329541.1|BM329541 PIC1_39_D08.g1_A002 Pathogen-infecte... 178 7e-044
gb|CD462204.1|CD462204 SA1_40_B09.b1_A002 Salicylic acid-tr... 178 7e-044
gb|AW679681.1|AW679681 WS1_30_E12.g1_A002 Water-stressed 1 ... 170 4e-043
gb|BG053517.1|BG053517 RHIZ2_10_B08.g1_A003 Rhizome2 (RHIZ2... 164 1e-041
gb|CW430454.1|CW430454 fsbb001f144c20f0 Sorghum methylation... 168 7e-041
gb|CW368244.1|CW368244 fsbb001f042b22k0 Sorghum methylation... 165 7e-040
gb|CW280288.1|CW280288 104_755_11407540_148_35446_008 Sorgh... 155 5e-037
gb|CW363767.1|CW363767 fsbb001f035i09f0 Sorghum methylation... 155 5e-037
gb|BM330114.1|BM330114 PIC1_47_C12.g1_A002 Pathogen-infecte... 154 2e-036
gb|CW038426.1|CW038426 104_270_10504920_115_30386 Sorghum m... 94 7e-036
gb|BM329226.1|BM329226 PIC1_35_A07.g1_A002 Pathogen-infecte... 147 2e-034
gb|BM331672.1|BM331672 PIC1_59_C05.g1_A002 Pathogen-infecte... 147 2e-034
gb|AW671681.1|AW671681 LG1_349_E04.b1_A002 Light Grown 1 (L... 144 1e-033
gb|CD236116.1|CD236116 SS1_32_H04.b1_A012 Salt-stressed see... 141 1e-032
gb|CW034726.1|CW034726 104_265_10502729_114_30378 Sorghum m... 138 1e-031
gb|CW492772.1|CW492772 fsbb001f283d16k0 Sorghum methylation... 132 8e-030
gb|BE362057.1|BE362057 DG1_84_G12.b1_A002 Dark Grown 1 (DG1... 131 1e-029
gb|CW183962.1|CW183962 104_600_11164896_148_36687_096 Sorgh... 123 3e-029
gb|CW111205.1|CW111205 104_484_11104174_148_34528_089 Sorgh... 129 4e-029
gb|AZ922789.1|AZ922789 SLCot4E02 Sorghum bicolor SLCot Sorg... 113 2e-028
gb|CW308234.1|CW308234 104_796_11468560_148_35739_054 Sorgh... 125 9e-028
gb|CW310536.1|CW310536 104_799_11469765_116_37434_083 Sorgh... 124 1e-027
gb|CW105164.1|CW105164 104_474_11012772_148_34449_042 Sorgh... 124 2e-027
gb|CW311718.1|CW311718 104_801_11470377_148_36278_041 Sorgh... 123 3e-027
gb|CW270918.1|CW270918 104_742_11402708_148_35335_066 Sorgh... 113 5e-026
gb|BM328737.1|BM328737 PIC1_26_A01.g1_A002 Pathogen-infecte... 119 6e-026
gb|BM329963.1|BM329963 PIC1_45_E03.g1_A002 Pathogen-infecte... 117 2e-025
gb|CW151320.1|CW151320 104_552_11143873_148_36316_013 Sorgh... 98 1e-023
gb|CW441737.1|CW441737 fsbb001f161a13f0 Sorghum methylation... 109 6e-023
gb|CF486256.1|CF486256 POL1_36_E02.g1_A002 Pollen Sorghum b... 108 8e-023
gb|CW378681.1|CW378681 fsbb001f057i24f0 Sorghum methylation... 107 2e-022
gb|CW143027.1|CW143027 104_534_11137188_148_34947_038 Sorgh... 107 2e-022
gb|CW501464.1|CW501464 fsbb001f297e18f0 Sorghum methylation... 93 1e-021
gb|CW328501.1|CW328501 104_824_11479337_116_35987_069 Sorgh... 93 1e-021
gb|BG465823.1|BG465823 RHIZ2_45_A06.g1_A003 Rhizome2 (RHIZ2... 95 4e-021
gb|CW491307.1|CW491307 fsbb001f281b24f0 Sorghum methylation... 93 5e-021
gb|CW023183.1|CW023183 104_162_10432303_1_30008 Sorghum met... 101 1e-020
>gb|CN134750.1|CN134750 OX1_28_E12.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_28_E12_A002 3', mRNA sequence
Length = 842
Score = 313 bits (678), Expect(2) = 5e-086
Identities = 124/138 (89%), Positives = 131/138 (94%)
Frame = -2 / +1
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
LIAEP+DARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFG+FLYELLFGKTPFKGS NRA
Sbjct: 211 LIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA 390
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TLFNV+GQ LRFPE P VSFSARDLIRGLLVK+PQ RL YKRG TEIKQHPFFEGVNWAL
Sbjct: 391 TLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYKRGTTEIKQHPFFEGVNWAL 570
Query: 374 IRCASPPEVPKPVEIERP 321
IRCASPP+VPKPVE++RP
Sbjct: 571 IRCASPPDVPKPVELDRP 624
Score = 243 bits (525), Expect = 2e-063
Identities = 106/140 (75%), Positives = 114/140 (81%)
Frame = +1 / -1
Query: 316 FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAE 495
F G S STGFGTSGGLAH ++AQFTPSK GCCLISV PRL* RC GS TS PLI+SLAE
Sbjct: 629 FGGRSSSTGFGTSGGLAHRINAQFTPSKNGCCLISVVPRL*PRRCCGSLTSNPLIKSLAE 450
Query: 496 KLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGA 675
KLT G SG R P TL SVAR DPLKGV PN SS +N PKVHQSTALPWPSPL+ISGA
Sbjct: 449 KLTIGDSGNRRG*PTTLKSVARFPDPLKGVLPNRSS*RNIPKVHQSTALPWPSPLIISGA 270
Query: 676 RYSCVPTNDIDRASLGSAMS 735
+YS VPTNDI+RAS+GSAMS
Sbjct: 269 KYSWVPTNDIERASVGSAMS 210
Score = 123 bits (263), Expect = 3e-027
Identities = 56/133 (42%), Positives = 81/133 (60%)
Frame = +3 / -3
Query: 327 LDLDRLWYLRWACAPYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREADG 506
+ LDRLWY+R AC P +RPIH LKE +LLDL + V + +L + +Q+ Q+P E
Sbjct: 618 IQLDRLWYIRRACTPNQRPIHTLKERVLLDLSSPSFVAKTMLRVFDQQSSYQVPS*ETHN 439
Query: 507 RVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQEYPEGPPVDGAAMALAFDDLGGQVLV 686
L E + L N+IE+ PV+ LER L + +L++EY +GPP+ AMA + D QVL+
Sbjct: 438 WGLWEPKGLTNNIEECSPVS*PLERGLTK*ELIKEYTKGPPIHSTAMAFSLDYFWRQVLM 259
Query: 687 RPNERHRPCVAGL 725
N+ HR + L
Sbjct: 258 GANK*HRASIGWL 220
Score = 117 bits (251), Expect = 1e-025
Identities = 60/141 (42%), Positives = 83/141 (58%)
Frame = -1 / +3
Query: 735 AHSRAQRRTVDVVRWDARVPGPRDHQRRGPWQRRRLVDLRGILVRAAVREDAFQGIQQPG 556
AH A R ++ V+ W V G R++Q R PWQ LVDL I + A + D FQG+++PG
Sbjct: 210 AHCGANRCSLYVICWHP*VLGARNNQGRRPWQCCGLVDLWYIPL*APIW*DPFQGVRKPG 389
Query: 555 HAVQCHWPAAALPGVPGRQLLGEGSDQGSACEGAPATAGLQAWSHGDQAASLL*GRELGA 376
+ +QC W A ++P VP + L G D+ A + A++ LQ + DQAA +L*G ELG
Sbjct: 390 YTLQCCWSAPSVPRVPNCEFLS*GLDKRIAGQRPAASSWLQTRDY*DQAAPVL*GCELGV 569
Query: 375 HKVRKPTGGTKACRDREAVKS 313
V KP+G TKACR K+
Sbjct: 570 DSVCKPSGCTKACRAGSPTKT 632
Score = 26.3 bits (51), Expect(2) = 5e-086
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2 / +1
Query: 260 QKGVDGYLEFGFF*QTCGFFY 198
QKG D +LEF FF* F +
Sbjct: 670 QKGPDNFLEFEFF*SCFPFSF 732
>gb|CF489387.1|CF489387 POL1_57_F11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_F11_A002 3', mRNA sequence
Length = 712
Score = 310 bits (671), Expect(2) = 1e-085
Identities = 124/138 (89%), Positives = 130/138 (94%)
Frame = -2 / +2
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFG+FLYELLFGKTPFKG+ NRA
Sbjct: 5 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGTGNRA 184
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TLFNVIGQ LRFPEYP VSF ARDLIR LLVKEPQQRL +KRGATEIKQHPFFEGVNWAL
Sbjct: 185 TLFNVIGQPLRFPEYPVVSFPARDLIRSLLVKEPQQRLGFKRGATEIKQHPFFEGVNWAL 364
Query: 374 IRCASPPEVPKPVEIERP 321
IRCASPPEVP+ +IE+P
Sbjct: 365 IRCASPPEVPRHFDIEKP 418
Score = 250 bits (541), Expect = 1e-065
Identities = 110/150 (73%), Positives = 119/150 (79%)
Frame = +1 / -2
Query: 286 AAAPDGDEG*FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFT 465
AA D D G F G S+S GTSGGLA ++AQFTPSK GCC ISVAPRL +RCWGS T
Sbjct: 453 AALSDVDTGCFGGFSMSKCLGTSGGLAQRINAQFTPSKNGCCFISVAPRLKPNRCWGSLT 274
Query: 466 SRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALP 645
R LI+SLA KLT GYSGKR PMTLNSVAR PL GVFPN SSY+N PKVHQSTALP
Sbjct: 273 RRLLIKSLAGKLTTGYSGKRKG*PMTLNSVARFPVPLNGVFPNRSSYRNIPKVHQSTALP 94
Query: 646 WPSPLMISGARYSCVPTNDIDRASLGSAMS 735
PSPL+ISGA+YSCVPTNDIDRASLGSA+S
Sbjct: 93 *PSPLIISGAKYSCVPTNDIDRASLGSAIS 4
Score = 125 bits (268), Expect = 7e-028
Identities = 59/136 (43%), Positives = 80/136 (58%)
Frame = +3 / -1
Query: 327 LDLDRLWYLRWACAPYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREADG 506
L++ W L Y+ P+H LK+ +L L G+TL Q LLGL ++T IP EA
Sbjct: 412 LNVKMPWNLWRTRTAYQCPVHTLKKWVLFYLGGTTLKTQSLLGLFDQETSY*IPSWEAHN 233
Query: 507 RVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQEYPEGPPVDGAAMALAFDDLGGQVLV 686
+ RE Q L NDIEQ PV + E P+Q+L+ EY +GPPV+ M L FD+LG QVL+
Sbjct: 232 WIFRETQGLTNDIEQCRPVPRAFEWCFPKQELI*EYTKGPPVNSTTMTLTFDNLGCQVLM 53
Query: 687 RPNERHRPCVAGLCYE 734
N+ HR C+ CY+
Sbjct: 52 CTNK*HRSCITRFCYK 5
Score = 107 bits (229), Expect(2) = 2e-023
Identities = 58/150 (38%), Positives = 81/150 (54%)
Frame = -1 / +1
Query: 735 AHSRAQRRTVDVVRWDARVPGPRDHQRRGPWQRRRLVDLRGILVRAAVREDAFQGIQQPG 556
A+SR T+DV+ W V G RD+QR G W LVDL I + A V E+ Q +PG
Sbjct: 4 AYSRT**CTIDVICWYT*VLGTRDYQR*GSW*CC*LVDLWYIPI*APVWENTIQRHGEPG 183
Query: 555 HAVQCHWPAAALPGVPGRQLLGEGSDQGSACEGAPATAGLQAWSHGDQAASLL*GRELGA 376
VQCHW A A P + +L G ++ S + AP T G AW H D+ A + *G ELG
Sbjct: 184 DTVQCHWSALAFP*ISSCELPS*GFNKKSPGQRAPTTIGF*AWCHRDKTAPIF*GCELGI 363
Query: 375 HKVRKPTGGTKACRDREAVKSSFIAVWSCC 286
+ + + G+KA EA +++ + + CC
Sbjct: 364 DTLCESSRGSKAF*H*EAPEAACVNIRECC 453
Score = 28.1 bits (55), Expect(2) = 1e-085
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +2
Query: 260 QKGVDGYLEFGFF* 219
Q G D YLEFGFF*
Sbjct: 455 QNGGDNYLEFGFF* 496
Score = 22.1 bits (42), Expect(2) = 2e-023
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1 / +1
Query: 276 LRWCTPERCRRLLGVWFLL 220
+R C PE L VWFLL
Sbjct: 439 IRECCPEWW**LFRVWFLL 495
>gb|CW365891.1|CW365891 fsbb001f038k04k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038k04, DNA
sequence
Length = 693
Score = 310 bits (671), Expect(2) = 1e-085
Identities = 124/138 (89%), Positives = 130/138 (94%)
Frame = -2 / -2
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFG+FLYELLFGKTPFKG+ NRA
Sbjct: 548 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGTGNRA 369
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TLFNVIGQ LRFPEYP VSF ARDLIR LLVKEPQQRL +KRGATEIKQHPFFEGVNWAL
Sbjct: 368 TLFNVIGQPLRFPEYPVVSFPARDLIRSLLVKEPQQRLGFKRGATEIKQHPFFEGVNWAL 189
Query: 374 IRCASPPEVPKPVEIERP 321
IRCASPPEVP+ +IE+P
Sbjct: 188 IRCASPPEVPRHFDIEKP 135
Score = 250 bits (541), Expect = 1e-065
Identities = 110/150 (73%), Positives = 119/150 (79%)
Frame = +1 / +1
Query: 286 AAAPDGDEG*FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFT 465
AA D D G F G S+S GTSGGLA ++AQFTPSK GCC ISVAPRL +RCWGS T
Sbjct: 100 AALSDVDTGCFGGFSMSKCLGTSGGLAQRINAQFTPSKNGCCFISVAPRLKPNRCWGSLT 279
Query: 466 SRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALP 645
R LI+SLA KLT GYSGKR PMTLNSVAR PL GVFPN SSY+N PKVHQSTALP
Sbjct: 280 RRLLIKSLAGKLTTGYSGKRKG*PMTLNSVARFPVPLNGVFPNRSSYRNIPKVHQSTALP 459
Query: 646 WPSPLMISGARYSCVPTNDIDRASLGSAMS 735
PSPL+ISGA+YSCVPTNDIDRASLGSA+S
Sbjct: 460 *PSPLIISGAKYSCVPTNDIDRASLGSAIS 549
Score = 125 bits (268), Expect = 7e-028
Identities = 59/136 (43%), Positives = 80/136 (58%)
Frame = +3 / +3
Query: 327 LDLDRLWYLRWACAPYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREADG 506
L++ W L Y+ P+H LK+ +L L G+TL Q LLGL ++T IP EA
Sbjct: 141 LNVKMPWNLWRTRTAYQCPVHTLKKWVLFYLGGTTLKTQSLLGLFDQETSY*IPSWEAHN 320
Query: 507 RVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQEYPEGPPVDGAAMALAFDDLGGQVLV 686
+ RE Q L NDIEQ PV + E P+Q+L+ EY +GPPV+ M L FD+LG QVL+
Sbjct: 321 WIFRETQGLTNDIEQCRPVPRAFEWCFPKQELI*EYTKGPPVNSTTMTLTFDNLGCQVLM 500
Query: 687 RPNERHRPCVAGLCYE 734
N+ HR C+ CY+
Sbjct: 501 CTNK*HRSCITRFCYK 548
Score = 107 bits (229), Expect(2) = 2e-023
Identities = 58/150 (38%), Positives = 81/150 (54%)
Frame = -1 / -1
Query: 735 AHSRAQRRTVDVVRWDARVPGPRDHQRRGPWQRRRLVDLRGILVRAAVREDAFQGIQQPG 556
A+SR T+DV+ W V G RD+QR G W LVDL I + A V E+ Q +PG
Sbjct: 549 AYSRT**CTIDVICWYT*VLGTRDYQR*GSW*CC*LVDLWYIPI*APVWENTIQRHGEPG 370
Query: 555 HAVQCHWPAAALPGVPGRQLLGEGSDQGSACEGAPATAGLQAWSHGDQAASLL*GRELGA 376
VQCHW A A P + +L G ++ S + AP T G AW H D+ A + *G ELG
Sbjct: 369 DTVQCHWSALAFP*ISSCELPS*GFNKKSPGQRAPTTIGF*AWCHRDKTAPIF*GCELGI 190
Query: 375 HKVRKPTGGTKACRDREAVKSSFIAVWSCC 286
+ + + G+KA EA +++ + + CC
Sbjct: 189 DTLCESSRGSKAF*H*EAPEAACVNIRECC 100
Score = 28.1 bits (55), Expect(2) = 1e-085
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -2
Query: 260 QKGVDGYLEFGFF* 219
Q G D YLEFGFF*
Sbjct: 98 QNGGDNYLEFGFF* 57
Score = 22.1 bits (42), Expect(2) = 2e-023
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1 / -1
Query: 276 LRWCTPERCRRLLGVWFLL 220
+R C PE L VWFLL
Sbjct: 114 IRECCPEWW**LFRVWFLL 58
>gb|CW365890.1|CW365890 fsbb001f038k04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038k04, DNA
sequence
Length = 678
Score = 310 bits (671), Expect(2) = 1e-085
Identities = 124/138 (89%), Positives = 130/138 (94%)
Frame = -2 / +2
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFG+FLYELLFGKTPFKG+ NRA
Sbjct: 143 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGTGNRA 322
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TLFNVIGQ LRFPEYP VSF ARDLIR LLVKEPQQRL +KRGATEIKQHPFFEGVNWAL
Sbjct: 323 TLFNVIGQPLRFPEYPVVSFPARDLIRSLLVKEPQQRLGFKRGATEIKQHPFFEGVNWAL 502
Query: 374 IRCASPPEVPKPVEIERP 321
IRCASPPEVP+ +IE+P
Sbjct: 503 IRCASPPEVPRHFDIEKP 556
Score = 250 bits (541), Expect = 1e-065
Identities = 110/150 (73%), Positives = 119/150 (79%)
Frame = +1 / -1
Query: 286 AAAPDGDEG*FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFT 465
AA D D G F G S+S GTSGGLA ++AQFTPSK GCC ISVAPRL +RCWGS T
Sbjct: 591 AALSDVDTGCFGGFSMSKCLGTSGGLAQRINAQFTPSKNGCCFISVAPRLKPNRCWGSLT 412
Query: 466 SRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALP 645
R LI+SLA KLT GYSGKR PMTLNSVAR PL GVFPN SSY+N PKVHQSTALP
Sbjct: 411 RRLLIKSLAGKLTTGYSGKRKG*PMTLNSVARFPVPLNGVFPNRSSYRNIPKVHQSTALP 232
Query: 646 WPSPLMISGARYSCVPTNDIDRASLGSAMS 735
PSPL+ISGA+YSCVPTNDIDRASLGSA+S
Sbjct: 231 *PSPLIISGAKYSCVPTNDIDRASLGSAIS 142
Score = 125 bits (268), Expect = 7e-028
Identities = 59/136 (43%), Positives = 80/136 (58%)
Frame = +3 / -3
Query: 327 LDLDRLWYLRWACAPYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREADG 506
L++ W L Y+ P+H LK+ +L L G+TL Q LLGL ++T IP EA
Sbjct: 550 LNVKMPWNLWRTRTAYQCPVHTLKKWVLFYLGGTTLKTQSLLGLFDQETSY*IPSWEAHN 371
Query: 507 RVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQEYPEGPPVDGAAMALAFDDLGGQVLV 686
+ RE Q L NDIEQ PV + E P+Q+L+ EY +GPPV+ M L FD+LG QVL+
Sbjct: 370 WIFRETQGLTNDIEQCRPVPRAFEWCFPKQELI*EYTKGPPVNSTTMTLTFDNLGCQVLM 191
Query: 687 RPNERHRPCVAGLCYE 734
N+ HR C+ CY+
Sbjct: 190 CTNK*HRSCITRFCYK 143
Score = 107 bits (229), Expect(2) = 2e-023
Identities = 58/150 (38%), Positives = 81/150 (54%)
Frame = -1 / +1
Query: 735 AHSRAQRRTVDVVRWDARVPGPRDHQRRGPWQRRRLVDLRGILVRAAVREDAFQGIQQPG 556
A+SR T+DV+ W V G RD+QR G W LVDL I + A V E+ Q +PG
Sbjct: 142 AYSRT**CTIDVICWYT*VLGTRDYQR*GSW*CC*LVDLWYIPI*APVWENTIQRHGEPG 321
Query: 555 HAVQCHWPAAALPGVPGRQLLGEGSDQGSACEGAPATAGLQAWSHGDQAASLL*GRELGA 376
VQCHW A A P + +L G ++ S + AP T G AW H D+ A + *G ELG
Sbjct: 322 DTVQCHWSALAFP*ISSCELPS*GFNKKSPGQRAPTTIGF*AWCHRDKTAPIF*GCELGI 501
Query: 375 HKVRKPTGGTKACRDREAVKSSFIAVWSCC 286
+ + + G+KA EA +++ + + CC
Sbjct: 502 DTLCESSRGSKAF*H*EAPEAACVNIRECC 591
Score = 28.1 bits (55), Expect(2) = 1e-085
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +2
Query: 260 QKGVDGYLEFGFF* 219
Q G D YLEFGFF*
Sbjct: 593 QNGGDNYLEFGFF* 634
Score = 22.1 bits (42), Expect(2) = 2e-023
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1 / +1
Query: 276 LRWCTPERCRRLLGVWFLL 220
+R C PE L VWFLL
Sbjct: 577 IRECCPEWW**LFRVWFLL 633
>gb|CW353450.1|CW353450 fsbb001f016d09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f016d09, DNA
sequence
Length = 730
Score = 309 bits (670), Expect = 2e-083
Identities = 122/136 (89%), Positives = 130/136 (95%)
Frame = -2 / +3
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
LIAEP+DARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFG+FLYELLFGKTPFKGS NRA
Sbjct: 261 LIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA 440
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TLFNV+GQ LRFPE P VSFSARD+IRGLLVK+PQ RL YKRGATEIKQHPFFEGVNWAL
Sbjct: 441 TLFNVVGQPLRFPESPIVSFSARDMIRGLLVKDPQHRLGYKRGATEIKQHPFFEGVNWAL 620
Query: 374 IRCASPPEVPKPVEIE 327
IRCASPP++PKPVE+E
Sbjct: 621 IRCASPPDIPKPVELE 668
Score = 248 bits (536), Expect = 7e-065
Identities = 109/153 (71%), Positives = 117/153 (76%)
Frame = +1 / -1
Query: 277 ASSAAAPDGDEG*FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWG 456
A+ A P D F S STGFG SGGLAHLM AQFTPSKKGCC ISVAPRL SRC G
Sbjct: 718 ATGATFPFADGTCFGRHSSSTGFGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCG 539
Query: 457 SFTSRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQST 636
S TS PLI SLAEKLT G SG WP TL SVARL +PL GV PN++SYKN PKVHQST
Sbjct: 538 SLTSNPLIMSLAEKLTIGDSGNLKGWPTTLKSVARLPEPLNGVLPNNNSYKNMPKVHQST 359
Query: 637 ALPWPSPLMISGARYSCVPTNDIDRASLGSAMS 735
ALPWPSP +ISGA+YS VPT DI+RAS+GSAMS
Sbjct: 358 ALPWPSPFIISGAKYSWVPTKDIERASVGSAMS 260
Score = 142 bits (305), Expect = 5e-033
Identities = 69/147 (46%), Positives = 92/147 (62%)
Frame = -1 / +2
Query: 735 AHSRAQRRTVDVVRWDARVPGPRDHQRRGPWQRRRLVDLRGILVRAAVREDAFQGIQQPG 556
AH A +++V+ W V GPR+++R GPW+ LVDL ILVR V +D Q +QPG
Sbjct: 260 AHC*AN*CSLNVLCWHP*VLGPRNNKRGGPWKCCGLVDLWHILVRVVVWQDPVQRFRQPG 439
Query: 555 HAVQCHWPAAALPGVPGRQLLGEGSDQGSACEGAPATAGLQAWSHGDQAASLL*GRELGA 376
+ +Q PA +P VP +LL EG D+G A +G A +QAW + D+A S L*G ELG+
Sbjct: 440 YTLQRCGPALEVPRVPNCELLCEGHDKGIASQGPAAPTWVQAWCYRDKATSFL*GCELGS 619
Query: 375 HKVRKPTGGTKACRDREAVKSSFIAVW 295
HKVRKP+ TKAC R K+S I+ W
Sbjct: 620 HKVRKPSRHTKAC*ARVPPKASAISKW 700
Score = 142 bits (304), Expect = 7e-033
Identities = 67/136 (49%), Positives = 90/136 (66%)
Frame = +3 / -3
Query: 327 LDLDRLWYLRWACAPYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREADG 506
L+L+RLWY+ ACAPYE P+H LKE MLL L +TLV + +L +L Q+P +PRREA
Sbjct: 668 LELNRLWYVWRACAPYESPVHTLKERMLLYLGSTTLVPKSVLRVLD*QSPYHVPRREAHN 489
Query: 507 RVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQEYPEGPPVDGAAMALAFDDLGGQVLV 686
L E Q LA+++E+ PVA + ER L +QQLVQEY +GPP+ +MAL F GQVL+
Sbjct: 488 WGLWEPQGLAHNVEECSPVA*TFERGLAKQQLVQEYAKGPPIHSTSMALPFYYFWGQVLM 309
Query: 687 RPNERHRPCVAGLCYE 734
N+ H ++ L E
Sbjct: 308 GANKGH*ASISWLSNE 261
>gb|BG103243.1|BG103243 RHIZ2_19_H12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 691
Score = 305 bits (660), Expect = 6e-082
Identities = 123/172 (71%), Positives = 138/172 (80%)
Frame = -2 / +1
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
L+AEP+ ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFG+FL+ELL+GKTPFKGS NRA
Sbjct: 43 LVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRA 222
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TLFNV+GQQL+FPE P+ S+S+RDLIRGLLVKEPQ RL KRGATEIKQHPFFEGVNWAL
Sbjct: 223 TLFNVVGQQLKFPESPSTSYSSRDLIRGLLVKEPQSRLGVKRGATEIKQHPFFEGVNWAL 402
Query: 374 IRCASPPEVPKPVEIERPSNHXXXXXXXXXXXXXXXXPQKGVDGYLEFGFF* 219
IRC++PPEVP+PVE E P + K YL+F FF*
Sbjct: 403 IRCSTPPEVPRPVEAELPVKYGVAEAIGSNSKRIAGADVKSGGKYLDFEFF* 558
Score = 215 bits (463), Expect = 8e-055
Identities = 97/140 (69%), Positives = 103/140 (73%)
Frame = +1 / -3
Query: 316 FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAE 495
F G S STG GTSGG+ H M AQFTPSKKGCCLISVAPR R GS T PL+RSL E
Sbjct: 461 FTGSSASTGLGTSGGVLHRMRAQFTPSKKGCCLISVAPRFTPRRLCGSLTRSPLMRSLLE 282
Query: 496 KLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGA 675
L G SG SC P TLN VAR DPL GV P SSS++ PKVHQSTALP PSPLMISGA
Sbjct: 281 *LVDGDSGNFSC*PTTLNRVARFPDPLNGVLPYSSSWRKMPKVHQSTALPCPSPLMISGA 102
Query: 676 RYSCVPTNDIDRASLGSAMS 735
+YS VPTNDIDRA +GSA S
Sbjct: 101 KYS*VPTNDIDRADVGSATS 42
Score = 114 bits (244), Expect = 1e-024
Identities = 60/129 (46%), Positives = 75/129 (58%)
Frame = +3 / -2
Query: 321 RPLDLDRLWYLRWACAPYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREA 500
R L LD L AP E P+HAL+EG+LLDLR S L + L L ++ PD+I A
Sbjct: 456 RQLGLDGPGDLGRGAAPDESPVHALEEGVLLDLRRSPLHAEAALRFLDQEPPDEISA*VA 277
Query: 501 DGRVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQEYPEGPPVDGAAMALAFDDLGGQV 680
GR L + QLL + +EQ G V LE QQLV+E EGPPVDGA+M DD G V
Sbjct: 276 RGRRLWKFQLLTDHVEQSGAVP*PLEWGFAVQQLVEEDAEGPPVDGASMPFTLDDFRG*V 97
Query: 681 LVRPNERHR 707
+ P++ HR
Sbjct: 96 FMSPDK*HR 70
Score = 114 bits (244), Expect = 1e-024
Identities = 58/135 (42%), Positives = 81/135 (60%)
Frame = -1 / +3
Query: 726 RAQRRTVDVVRWDARVPGPRDHQRRGPWQRRRLVDLRGILVRAAVREDAFQGIQQPGHAV 547
RA +DV+ D+ + P +HQ W+RRRLVDLR + RAAVR++ QG+++P H+V
Sbjct: 51 RANISPIDVICRDS*ILSP*NHQG*RAWKRRRLVDLRHLPPRAAVRQNPIQGVREPRHSV 230
Query: 546 QCHWPAAALPGVPGRQLLGEGSDQGSACEGAPATAGLQAWSHGDQAASLL*GRELGAHKV 367
Q A + V +LL + S QG+ +G +A S GDQAA LL GRELG+H V
Sbjct: 231 QRGRSATEISRVAVHELLKQRSHQGAPGQGTAEPPRREAGSDGDQAAPLLRGRELGSHPV 410
Query: 366 RKPTGGTKACRDREA 322
+ P+ G +A R R A
Sbjct: 411 QHPSRGPQARRGRAA 455
>gb|CX606300.1|CX606300 ANR1_2_F08.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_2_F08_A002 3', mRNA sequence
Length = 593
Score = 295 bits (639), Expect(2) = 3e-081
Identities = 120/141 (85%), Positives = 125/141 (88%)
Frame = -2 / +2
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFG+FL ELLFGKTPFKG+ NRA
Sbjct: 5 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFL*ELLFGKTPFKGTGNRA 184
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TLFNVIG LRFPEYP VSF ARDLIR LLVKEPQQRL +KRG EIKQ PFFEGVNWAL
Sbjct: 185 TLFNVIGHPLRFPEYPVVSFPARDLIRSLLVKEPQQRLGFKRGPPEIKQPPFFEGVNWAL 364
Query: 374 IRCASPPEVPKPVEIERPSNH 312
IRCASPPEVP+ +IE P H
Sbjct: 365 IRCASPPEVPRHFDIENPPKH 427
Score = 238 bits (514), Expect = 8e-062
Identities = 106/149 (71%), Positives = 115/149 (77%)
Frame = +1 / -3
Query: 289 AAPDGDEG*FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTS 468
A D D G F G S+S GTSGGLA ++AQFTPSK G C IS PRL +RCWGS T
Sbjct: 450 ALSDVDTGCFGGFSMSKCLGTSGGLAQRINAQFTPSKNGGCFISGGPRLKPNRCWGSLTR 271
Query: 469 RPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPW 648
R LI+SLA KLT GYSGKR PMTLNSVAR PL GVFPN SSY+N PKVHQSTALP
Sbjct: 270 RLLIKSLAGKLTTGYSGKRKG*PMTLNSVARFPVPLNGVFPNRSSYRNIPKVHQSTALP* 91
Query: 649 PSPLMISGARYSCVPTNDIDRASLGSAMS 735
PSPL+ISGA+YSCVPTNDIDRASLGSA+S
Sbjct: 90 PSPLIISGAKYSCVPTNDIDRASLGSAIS 4
Score = 126 bits (269), Expect = 5e-028
Identities = 59/136 (43%), Positives = 80/136 (58%)
Frame = +3 / -2
Query: 327 LDLDRLWYLRWACAPYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREADG 506
L++ W L Y+ P+H LK+ L L G+TL Q LLGL ++T IP EA
Sbjct: 412 LNVKMPWNLWRTRTAYQCPVHTLKKWGLFYLGGTTLKTQSLLGLFDQETSY*IPSWEAHN 233
Query: 507 RVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQEYPEGPPVDGAAMALAFDDLGGQVLV 686
+ RE Q + NDIEQ PV + E P+Q+L+ EY +GPPV+ M L FD+LGGQVL+
Sbjct: 232 WIFRETQGVTNDIEQCRPVPRAFEWGFPKQELL*EYTKGPPVNSTTMTLTFDNLGGQVLM 53
Query: 687 RPNERHRPCVAGLCYE 734
N+ HR C+ CY+
Sbjct: 52 CTNK*HRSCITRFCYK 5
Score = 100 bits (212), Expect(2) = 3e-021
Identities = 54/132 (40%), Positives = 72/132 (54%)
Frame = -1 / +1
Query: 735 AHSRAQRRTVDVVRWDARVPGPRDHQRRGPWQRRRLVDLRGILVRAAVREDAFQGIQQPG 556
A+SR T+DV+ W V GPRD+QR G W LVDL I + A V E+ Q +PG
Sbjct: 4 AYSRT**CTIDVICWYT*VLGPRDYQR*GSW*CC*LVDLWYIPIGAPVWENPIQRHGEPG 183
Query: 555 HAVQCHWPAAALPGVPGRQLLGEGSDQGSACEGAPATAGLQAWSHGDQAASLL*GRELGA 376
VQCHW A P + +L G ++ S + AP T G AWS D+ A + *G ELG
Sbjct: 184 DTVQCHWSPLAFP*ISSCELPS*GFNKKSPGQRAPTTIGF*AWSPRDKTAPIF*GCELGI 363
Query: 375 HKVRKPTGGTKA 340
+ + + G+KA
Sbjct: 364 DTLCESSRGSKA 399
Score = 28.1 bits (55), Expect(2) = 3e-081
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +2
Query: 260 QKGVDGYLEFGFF* 219
Q G D YLEFGFF*
Sbjct: 455 QNGGDNYLEFGFF* 496
Score = 23.1 bits (44), Expect(2) = 3e-021
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1 / +1
Query: 276 LRWCTPERCRRLLGVWFLL 220
+R C+PE L VWFLL
Sbjct: 439 IRECSPEWW**LFRVWFLL 495
>gb|CD209113.1|CD209113 HS1_46_A12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_46_A12_A012 3', mRNA sequence
Length = 651
Score = 300 bits (649), Expect = 2e-080
Identities = 121/169 (71%), Positives = 135/169 (79%)
Frame = -2 / +1
Query: 725 EPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLF 546
EP+ ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFG+FL+ELL+GKTPFKGS NRATLF
Sbjct: 1 EPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLF 180
Query: 545 NVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRC 366
NV+GQQL+FPE P+ S+S+RDLIRGLLVKEPQ RL KRGATEIKQHPFFEGVNWALIRC
Sbjct: 181 NVVGQQLKFPESPSTSYSSRDLIRGLLVKEPQSRLGVKRGATEIKQHPFFEGVNWALIRC 360
Query: 365 ASPPEVPKPVEIERPSNHXXXXXXXXXXXXXXXXPQKGVDGYLEFGFF* 219
++PPEVP+PVE E P + K YL+F FF*
Sbjct: 361 STPPEVPRPVEAELPVKYGVAEAIGSNSKRIAGADVKSGGKYLDFEFF* 507
Score = 210 bits (452), Expect = 3e-053
Identities = 94/136 (69%), Positives = 100/136 (73%)
Frame = +1 / -2
Query: 316 FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAE 495
F G S STG GTSGG+ H M AQFTPSKKGCCLISVAPR R GS T PL+RSL E
Sbjct: 410 FTGSSASTGLGTSGGVLHRMRAQFTPSKKGCCLISVAPRFTPRRLCGSLTRSPLMRSLLE 231
Query: 496 KLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGA 675
L G SG SC P TLN VAR DPL GV P SSS++ PKVHQSTALP PSPLMISGA
Sbjct: 230 *LVDGDSGNFSC*PTTLNRVARFPDPLNGVLPYSSSWRKMPKVHQSTALPCPSPLMISGA 51
Query: 676 RYSCVPTNDIDRASLG 723
+YS VPTNDIDRA +G
Sbjct: 50 KYS*VPTNDIDRADVG 3
Score = 121 bits (259), Expect = 1e-026
Identities = 63/129 (48%), Positives = 76/129 (58%)
Frame = +3 / -1
Query: 321 RPLDLDRLWYLRWACAPYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREA 500
R L LD LR AP E P+HALKEG+LLDLR S L + L L ++ PD+I A
Sbjct: 405 RQLGLDGPGDLRRGAAPDESPVHALKEGVLLDLRRSPLHAEAALRFLDQEPPDEISA*VA 226
Query: 501 DGRVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQEYPEGPPVDGAAMALAFDDLGGQV 680
GR L + QLL + +EQ G V LE QQLV+E EGPPVDGA+M DD G V
Sbjct: 225 RGRRLWKFQLLTDHVEQSGAVP*PLEWGFAVQQLVEEDAEGPPVDGASMPFTLDDFRG*V 46
Query: 681 LVRPNERHR 707
+ P+E HR
Sbjct: 45 FMSPDE*HR 19
Score = 117 bits (251), Expect = 1e-025
Identities = 58/129 (44%), Positives = 81/129 (62%)
Frame = -1 / +3
Query: 708 VDVVRWDARVPGPRDHQRRGPWQRRRLVDLRGILVRAAVREDAFQGIQQPGHAVQCHWPA 529
+DV+R D+ + P +HQ W+RRRLVDLR + RAAVR++ QG+++P H+VQ A
Sbjct: 18 IDVIRRDS*ILSP*NHQG*RAWKRRRLVDLRHLPPRAAVRQNPIQGVREPRHSVQRGRSA 197
Query: 528 AALPGVPGRQLLGEGSDQGSACEGAPATAGLQAWSHGDQAASLL*GRELGAHKVRKPTGG 349
+ V +LL + S QG+ +G +A S GDQAA LL*GRELG+H V+ P+ G
Sbjct: 198 TEISRVAVHELLKQRSHQGAPGQGTAEPPRREAGSDGDQAAPLL*GRELGSHPVQHPS*G 377
Query: 348 TKACRDREA 322
+A R R A
Sbjct: 378 PQARRGRAA 404
>gb|CF489555.1|CF489555 POL1_58_F10.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_58_F10_A002 3', mRNA sequence
Length = 692
Score = 282 bits (611), Expect(2) = 2e-077
Identities = 113/132 (85%), Positives = 120/132 (90%)
Frame = -2 / +2
Query: 716 DARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVI 537
DARSMSFVGTHEYLAPEIIKGEGHGS VDW FG+FLYELLFGKTPFKG+ RATLFNVI
Sbjct: 2 DARSMSFVGTHEYLAPEIIKGEGHGSVVDWCPFGIFLYELLFGKTPFKGTGTRATLFNVI 181
Query: 536 GQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASP 357
GQ LRFPEYP VSF ARDLIR LLVK+PQQRL +KRGATEIKQHPFFEGVNWALIRCASP
Sbjct: 182 GQPLRFPEYPVVSFPARDLIRSLLVKDPQQRLGFKRGATEIKQHPFFEGVNWALIRCASP 361
Query: 356 PEVPKPVEIERP 321
PEVP+ +IE+P
Sbjct: 362 PEVPRHFDIEKP 397
Score = 236 bits (509), Expect = 4e-061
Identities = 103/144 (71%), Positives = 112/144 (77%)
Frame = +1 / -3
Query: 286 AAAPDGDEG*FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFT 465
AA D D G F G S+S GTSGGLA ++AQFTPSK GCC ISVAPRL +RCWGS T
Sbjct: 432 AALSDVDTGCFGGFSMSKCLGTSGGLAQRINAQFTPSKNGCCFISVAPRLKPNRCWGSLT 253
Query: 466 SRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALP 645
R LI+SLA KLT GYSGKR PMTLNSVAR+ PL GVFPN SSY+N PK HQST LP
Sbjct: 252 KRLLIKSLAGKLTTGYSGKRKG*PMTLNSVARVPVPLNGVFPNRSSYRNIPKGHQSTTLP 73
Query: 646 WPSPLMISGARYSCVPTNDIDRAS 717
PSPL+ISGA+YSCVPTNDIDRAS
Sbjct: 72 *PSPLIISGAKYSCVPTNDIDRAS 1
Score = 114 bits (243), Expect = 2e-024
Identities = 55/130 (42%), Positives = 76/130 (58%)
Frame = +3 / -2
Query: 327 LDLDRLWYLRWACAPYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREADG 506
L++ W L Y+ P+H LK+ +L L G+TL Q LLG+ ++T IP EA
Sbjct: 391 LNVKMPWNLWRTRTAYQCPVHTLKKWVLFYLGGTTLKTQSLLGVFDQETSY*IPSWEAHN 212
Query: 507 RVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQEYPEGPPVDGAAMALAFDDLGGQVLV 686
+ RE Q L NDIEQR P + E P+Q+L+ EY +G PV+ M L FD+LG QVL+
Sbjct: 211 WIFRETQGLTNDIEQRRPGPRAFEWCFPKQELI*EYTKGAPVNNTTMTLTFDNLGCQVLM 32
Query: 687 RPNERHRPCV 716
N+ HR C+
Sbjct: 31 CTNK*HRSCI 2
Score = 101 bits (215), Expect(2) = 2e-021
Identities = 54/142 (38%), Positives = 75/142 (52%)
Frame = -1 / +1
Query: 711 TVDVVRWDARVPGPRDHQRRGPWQRRRLVDLRGILVRAAVREDAFQGIQQPGHAVQCHWP 532
T+DV+ W V G RD+QR G W LV L I + A V E+ Q PG AVQCHW
Sbjct: 7 TIDVICWYT*VLGTRDYQR*GSW*CC*LVPLWYIPI*APVWENTIQRHGDPGDAVQCHWS 186
Query: 531 AAALPGVPGRQLLGEGSDQGSACEGAPATAGLQAWSHGDQAASLL*GRELGAHKVRKPTG 352
A A P + +L G ++ S + P T G AW H D+ A + *G ELG + + +
Sbjct: 187 ALAFP*ISSCELPS*GFNKKSLGQRPPTTIGF*AWCHRDKTAPIF*GCELGIDTLCESSR 366
Query: 351 GTKACRDREAVKSSFIAVWSCC 286
G+KA EA +++ + + CC
Sbjct: 367 GSKAF*H*EAPEAACVNIRECC 432
Score = 28.1 bits (55), Expect(2) = 2e-077
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +2
Query: 260 QKGVDGYLEFGFF* 219
Q G D YLEFGFF*
Sbjct: 434 QNGGDNYLEFGFF* 475
Score = 22.1 bits (42), Expect(2) = 2e-021
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1 / +1
Query: 276 LRWCTPERCRRLLGVWFLL 220
+R C PE L VWFLL
Sbjct: 418 IRECCPEWW**LFRVWFLL 474
>gb|BE597334.1|BE597334 PI1_72_B09.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 614
Score = 257 bits (556), Expect(2) = 1e-069
Identities = 100/113 (88%), Positives = 107/113 (94%)
Frame = -2 / +1
Query: 665 IIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSAR 486
IIKGEGHGSAVDWWTFG+FLYELLFGKTPFKGS NRATLFNV+GQ LRFPE P VSFSAR
Sbjct: 1 IIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSAR 180
Query: 485 DLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPKPVEIE 327
D+IRGLLVK+PQ RL YKRGATEIKQHPFFEGVNWALIRCASPP++PKPVE+E
Sbjct: 181 DMIRGLLVKDPQHRLGYKRGATEIKQHPFFEGVNWALIRCASPPDIPKPVELE 339
Score = 205 bits (442), Expect = 7e-052
Identities = 90/129 (69%), Positives = 95/129 (73%)
Frame = +1 / -1
Query: 277 ASSAAAPDGDEG*FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWG 456
A+ A P D F S STGFG SGGLAHLM AQFTPSKKGCC ISVAPRL SRC G
Sbjct: 389 ATGATFPFADGTCFGRHSSSTGFGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCG 210
Query: 457 SFTSRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQST 636
S TS PLI SLAEKLT G SG WP TL SVARL +PL GV PN++SYKN PKVHQST
Sbjct: 209 SLTSNPLIMSLAEKLTIGDSGNLKGWPTTLKSVARLPEPLNGVLPNNNSYKNMPKVHQST 30
Query: 637 ALPWPSPLM 663
ALPWPSP +
Sbjct: 29 ALPWPSPFI 3
Score = 131 bits (280), Expect = 1e-029
Identities = 59/111 (53%), Positives = 78/111 (70%)
Frame = +3 / -3
Query: 327 LDLDRLWYLRWACAPYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREADG 506
L+L+RLWY+ ACAPYE P+H LKE MLL L +TLV + +L +L Q+P +PRREA
Sbjct: 339 LELNRLWYVWRACAPYESPVHTLKERMLLYLGSTTLVPKSVLRVLD*QSPYHVPRREAHN 160
Query: 507 RVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQEYPEGPPVDGAAMALAF 659
L E Q LA+++E+ PVA + ER L +QQLVQEY +GPP+ +MAL F
Sbjct: 159 WGLWEPQGLAHNVEECSPVA*TFERGLAKQQLVQEYAKGPPIHSTSMALPF 7
Score = 127 bits (271), Expect = 3e-028
Identities = 60/123 (48%), Positives = 78/123 (63%)
Frame = -1 / +3
Query: 663 HQRRGPWQRRRLVDLRGILVRAAVREDAFQGIQQPGHAVQCHWPAAALPGVPGRQLLGEG 484
++R GPW+ LVDL ILVR V +D Q +QPG+ +Q PA +P VP +LL EG
Sbjct: 3 NKRGGPWKCCGLVDLWHILVRVVVWQDPVQRFRQPGYTLQRCGPALEVPRVPNCELLCEG 182
Query: 483 SDQGSACEGAPATAGLQAWSHGDQAASLL*GRELGAHKVRKPTGGTKACRDREAVKSSFI 304
D+G A +G A +QAW + D+A S L*G ELG+HKVRKP+ TKAC R K+S I
Sbjct: 183 HDKGIASQGPAAPTWVQAWCYRDKATSFL*GCELGSHKVRKPSRHTKAC*ARVPPKASAI 362
Query: 303 AVW 295
+ W
Sbjct: 363 SKW 371
Score = 27.2 bits (53), Expect(2) = 1e-069
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +1
Query: 260 QKGVDGYLEFGFF* 219
QKG D YLEF FF*
Sbjct: 394 QKGPDNYLEFEFF* 435
>gb|AW565318.1|AW565318 LG1_342_A06.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 698
Score = 255 bits (552), Expect(2) = 5e-069
Identities = 99/112 (88%), Positives = 106/112 (94%)
Frame = -2 / +3
Query: 662 IKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSARD 483
IKGEGHGSAVDWWTFG+FLYELLFGKTPFKGS NRATLFNV+GQ LRFPE P VSFSARD
Sbjct: 3 IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARD 182
Query: 482 LIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPKPVEIE 327
+IRGLLVK+PQ RL YKRGATEIKQHPFFEGVNWALIRCASPP++PKPVE+E
Sbjct: 183 MIRGLLVKDPQHRLGYKRGATEIKQHPFFEGVNWALIRCASPPDIPKPVELE 338
Score = 205 bits (442), Expect = 7e-052
Identities = 90/129 (69%), Positives = 95/129 (73%)
Frame = +1 / -2
Query: 277 ASSAAAPDGDEG*FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWG 456
A+ A P D F S STGFG SGGLAHLM AQFTPSKKGCC ISVAPRL SRC G
Sbjct: 388 ATGATFPFADGTCFGRHSSSTGFGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCG 209
Query: 457 SFTSRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQST 636
S TS PLI SLAEKLT G SG WP TL SVARL +PL GV PN++SYKN PKVHQST
Sbjct: 208 SLTSNPLIMSLAEKLTIGDSGNLKGWPTTLKSVARLPEPLNGVLPNNNSYKNMPKVHQST 29
Query: 637 ALPWPSPLM 663
ALPWPSP +
Sbjct: 28 ALPWPSPFI 2
Score = 131 bits (280), Expect = 1e-029
Identities = 59/111 (53%), Positives = 78/111 (70%)
Frame = +3 / -1
Query: 327 LDLDRLWYLRWACAPYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREADG 506
L+L+RLWY+ ACAPYE P+H LKE MLL L +TLV + +L +L Q+P +PRREA
Sbjct: 338 LELNRLWYVWRACAPYESPVHTLKERMLLYLGSTTLVPKSVLRVLD*QSPYHVPRREAHN 159
Query: 507 RVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQEYPEGPPVDGAAMALAF 659
L E Q LA+++E+ PVA + ER L +QQLVQEY +GPP+ +MAL F
Sbjct: 158 WGLWEPQGLAHNVEECSPVA*TFERGLAKQQLVQEYAKGPPIHSTSMALPF 6
Score = 127 bits (271), Expect = 3e-028
Identities = 60/123 (48%), Positives = 78/123 (63%)
Frame = -1 / +2
Query: 663 HQRRGPWQRRRLVDLRGILVRAAVREDAFQGIQQPGHAVQCHWPAAALPGVPGRQLLGEG 484
++R GPW+ LVDL ILVR V +D Q +QPG+ +Q PA +P VP +LL EG
Sbjct: 2 NKRGGPWKCCGLVDLWHILVRVVVWQDPVQRFRQPGYTLQRCGPALEVPRVPNCELLCEG 181
Query: 483 SDQGSACEGAPATAGLQAWSHGDQAASLL*GRELGAHKVRKPTGGTKACRDREAVKSSFI 304
D+G A +G A +QAW + D+A S L*G ELG+HKVRKP+ TKAC R K+S I
Sbjct: 182 HDKGIASQGPAAPTWVQAWCYRDKATSFL*GCELGSHKVRKPSRHTKAC*ARVPPKASAI 361
Query: 303 AVW 295
+ W
Sbjct: 362 SKW 370
Score = 27.2 bits (53), Expect(2) = 5e-069
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +3
Query: 260 QKGVDGYLEFGFF* 219
QKG D YLEF FF*
Sbjct: 393 QKGPDNYLEFEFF* 434
>gb|CW363768.1|CW363768 fsbb001f035i09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f035i09, DNA
sequence
Length = 716
Score = 259 bits (561), Expect = 3e-068
Identities = 102/138 (73%), Positives = 116/138 (84%)
Frame = -2 / +2
Query: 728 AEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATL 549
AEP+ ARSMSFVGTHEYLAPEII+G+GHGSAVDWWTFG+FLYELL G TPFKGS NRATL
Sbjct: 59 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFLYELLHGATPFKGSGNRATL 238
Query: 548 FNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIR 369
FNV+ Q LRFP+ PAVS +ARDLIRGLL KEP RLA +RGA E+KQHPFFEGVNWAL+R
Sbjct: 239 FNVVAQPLRFPDAPAVSAAARDLIRGLLAKEPHNRLASRRGAAEVKQHPFFEGVNWALVR 418
Query: 368 CASPPEVPKPVEIERPSN 315
A PP +P ++ S+
Sbjct: 419 SAQPPYIPDAAAVDHCSS 472
Score = 185 bits (398), Expect = 8e-046
Identities = 87/136 (63%), Positives = 95/136 (69%)
Frame = +1 / -3
Query: 328 SISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTA 507
S + G GG A L SAQ TPSKKGCC S APR ASR GS SRP +RSLA LTA
Sbjct: 459 STAAASGM*GGWALLTSAQLTPSKKGCCFTSAAPRRDASRLCGSLASRPRMRSLAAALTA 280
Query: 508 GYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSC 687
G SG S TL SVAR +PLKGV P SS + PKVHQSTALPWPSP MISGARYS
Sbjct: 279 GASGNLSGCATTLKSVARFPEPLKGVAPCRSS*RKMPKVHQSTALPWPSPRMISGARYSW 100
Query: 688 VPTNDIDRASLGSAMS 735
VPTND+DRA +GSA++
Sbjct: 99 VPTNDMDRALVGSAVN 52
Score = 122 bits (260), Expect = 8e-027
Identities = 57/115 (49%), Positives = 78/115 (67%)
Frame = +3 / -2
Query: 366 APYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREADGRVLREAQLLANDI 545
AP E P+ A +E +LL L + +P++ LL +Q PD++P R AD R + E + L +D+
Sbjct: 421 APDECPVDAFEERVLLHLGRAAAGREPVVRLLGQQAPDEVPGRGADRRRVGEPERLRDDV 242
Query: 546 EQRGPVAGSLERRLPEQQLVQEYPEGPPVDGAAMALAFDDLGGQVLVRPNERHRP 710
E+RG V G+LE R Q+LV+E EGPPVDGAA+A+A DDL QVLV +ERH P
Sbjct: 241 EERGAVPGALEGRGAVQELVEEDAEGPPVDGAAVAVAADDLRRQVLVGAHERHGP 77
Score = 106 bits (227), Expect = 3e-022
Identities = 55/123 (44%), Positives = 68/123 (55%)
Frame = -1 / +1
Query: 732 HSRAQRRTVDVVRWDARVPGPRDHQRRGPWQRRRLVDLRGILVRAAVREDAFQGIQQPGH 553
H RA R V VVR RVPG DH RR P QRRRLVDLR + +RA R A QG+++P H
Sbjct: 55 HGRADERAVHVVRGHPRVPGAGDHPRRRPRQRRRLVDLRHLPLRAPARRHALQGLREPRH 234
Query: 552 AVQCHWPAAALPGVPGRQLLGEGSDQGSACEGAPATAGLQAWSHGDQAASLL*GRELGAH 373
A+Q AA +P G Q G+G G A +GA A + +AA L R+LG
Sbjct: 235 ALQRRRAAAQVPRRAGGQRRGQGPHPGPAGQGAAQPARVPPRRGRGEAAPFLRRRQLGTR 414
Query: 372 KVR 364
+ R
Sbjct: 415 QER 423
>gb|CW176244.1|CW176244 104_589_11158384_148_36680_062 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11158384, DNA
sequence
Length = 724
Score = 248 bits (536), Expect = 7e-065
Identities = 97/134 (72%), Positives = 113/134 (84%)
Frame = -2 / -1
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
L+ EP++ARS SFVGTHEYLAPEII+G+GHGS+VDWWT G+FLYELL+GKTPFKG N
Sbjct: 625 LVVEPTEARSNSFVGTHEYLAPEIIRGDGHGSSVDWWTLGIFLYELLYGKTPFKGPGNEE 446
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TL NVI Q L+FP+ PAVSF ARDLIRGLLVKEP+ RL RGA EIK+HPFFEG+NWAL
Sbjct: 445 TLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPECRLGSSRGAAEIKRHPFFEGLNWAL 266
Query: 374 IRCASPPEVPKPVE 333
IR +PPE PK ++
Sbjct: 265 IRWTAPPETPKNID 224
Score = 174 bits (374), Expect = 2e-042
Identities = 82/136 (60%), Positives = 92/136 (67%)
Frame = +1 / +3
Query: 328 SISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTA 507
++S FG SGG H + AQF PSKKGC LIS AP SR GSFTS PLIRS A KLTA
Sbjct: 219 AVSMFFGVSGGAVHRIKAQFRPSKKGCRLISAAPLDEPSRHSGSFTSSPLIRSRAWKLTA 398
Query: 508 GYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSC 687
G SG +T SV+ L PL GV P S+S + P+VHQST LPWPSP MISGARYS
Sbjct: 399 GLSGNFKPCEITFESVSSLPGPLNGVLP*SNS*RKIPRVHQSTELPWPSPRMISGARYSW 578
Query: 688 VPTNDIDRASLGSAMS 735
VPTN+ D AS+GS S
Sbjct: 579 VPTNEFDLASVGSTTS 626
>gb|CW105163.1|CW105163 104_474_11012772_116_34453_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11012772, DNA
sequence
Length = 714
Score = 246 bits (531), Expect = 3e-064
Identities = 97/128 (75%), Positives = 110/128 (85%)
Frame = -2 / +1
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
L+ EP+DARS SFVGTHEYLAPEIIKG+GHGSAVDWWTFGVFLYELL+GKTPF+G N
Sbjct: 112 LVVEPTDARSNSFVGTHEYLAPEIIKGDGHGSAVDWWTFGVFLYELLYGKTPFRGPGNDE 291
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TL NV+ Q LRFP+ P+VS +A+DLIRGLLVKEP+ R RGA EIKQHPFFEG+NWAL
Sbjct: 292 TLANVVSQNLRFPDNPSVSSNAKDLIRGLLVKEPENRFGSLRGAAEIKQHPFFEGLNWAL 471
Query: 374 IRCASPPE 351
IR A+PPE
Sbjct: 472 IRSAAPPE 495
Score = 141 bits (303), Expect(2) = 2e-041
Identities = 62/94 (65%), Positives = 70/94 (74%)
Frame = +1 / -2
Query: 454 GSFTSRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQS 633
GSFTS+PLIRSLA LT G SG R T +V+ PLKGV P SS + TPKVHQS
Sbjct: 392 GSFTSKPLIRSLALLLTDGLSGNRRFCETTFANVSSFPGPLKGVLPYKSS*RKTPKVHQS 213
Query: 634 TALPWPSPLMISGARYSCVPTNDIDRASLGSAMS 735
TALPWPSPLMISGARYSCVPT +++RAS+GS S
Sbjct: 212 TALPWPSPLMISGARYSCVPTKELERASVGSTTS 111
Score = 48.7 bits (100), Expect(2) = 2e-041
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +1 / -2
Query: 352 SGGLAHLMSAQFTPSKKGCCLISVAP 429
SGG A + AQF PSKKGCCLIS AP
Sbjct: 494 SGGAAERIRAQFNPSKKGCCLISAAP 417
>gb|CW403691.1|CW403691 fsbb001f095i13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f095i13, DNA
sequence
Length = 681
Score = 246 bits (531), Expect = 3e-064
Identities = 97/128 (75%), Positives = 110/128 (85%)
Frame = -2 / +3
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
L+ EP+DARS SFVGTHEYLAPEIIKG+GHGSAVDWWTFGVFLYELL+GKTPF+G N
Sbjct: 258 LVVEPTDARSNSFVGTHEYLAPEIIKGDGHGSAVDWWTFGVFLYELLYGKTPFRGPGNDE 437
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TL NV+ Q LRFP+ P+VS +A+DLIRGLLVKEP+ R RGA EIKQHPFFEG+NWAL
Sbjct: 438 TLANVVSQNLRFPDNPSVSSNAKDLIRGLLVKEPENRFGSLRGAAEIKQHPFFEGLNWAL 617
Query: 374 IRCASPPE 351
IR A+PPE
Sbjct: 618 IRSAAPPE 641
Score = 141 bits (303), Expect(2) = 2e-041
Identities = 62/94 (65%), Positives = 70/94 (74%)
Frame = +1 / -3
Query: 454 GSFTSRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQS 633
GSFTS+PLIRSLA LT G SG R T +V+ PLKGV P SS + TPKVHQS
Sbjct: 538 GSFTSKPLIRSLALLLTDGLSGNRRFCETTFANVSSFPGPLKGVLPYKSS*RKTPKVHQS 359
Query: 634 TALPWPSPLMISGARYSCVPTNDIDRASLGSAMS 735
TALPWPSPLMISGARYSCVPT +++RAS+GS S
Sbjct: 358 TALPWPSPLMISGARYSCVPTKELERASVGSTTS 257
Score = 48.7 bits (100), Expect(2) = 2e-041
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +1 / -3
Query: 352 SGGLAHLMSAQFTPSKKGCCLISVAP 429
SGG A + AQF PSKKGCCLIS AP
Sbjct: 640 SGGAAERIRAQFNPSKKGCCLISAAP 563
>gb|CN149831.1|CN149831 WOUND1_65_D05.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_65_D05_A002 3', mRNA sequence
Length = 685
Score = 246 bits (531), Expect = 3e-064
Identities = 97/128 (75%), Positives = 110/128 (85%)
Frame = -2 / +2
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
L+ EP+DARS SFVGTHEYLAPEIIKG+GHGSAVDWWTFGVFLYELL+GKTPF+G N
Sbjct: 56 LVVEPTDARSNSFVGTHEYLAPEIIKGDGHGSAVDWWTFGVFLYELLYGKTPFRGPGNDE 235
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TL NV+ Q LRFP+ P+VS +A+DLIRGLLVKEP+ R RGA EIKQHPFFEG+NWAL
Sbjct: 236 TLANVVSQNLRFPDNPSVSSNAKDLIRGLLVKEPENRFGSLRGAAEIKQHPFFEGLNWAL 415
Query: 374 IRCASPPE 351
IR A+PPE
Sbjct: 416 IRSAAPPE 439
Score = 141 bits (303), Expect(2) = 2e-041
Identities = 62/94 (65%), Positives = 70/94 (74%)
Frame = +1 / -2
Query: 454 GSFTSRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQS 633
GSFTS+PLIRSLA LT G SG R T +V+ PLKGV P SS + TPKVHQS
Sbjct: 336 GSFTSKPLIRSLALLLTDGLSGNRRFCETTFANVSSFPGPLKGVLPYKSS*RKTPKVHQS 157
Query: 634 TALPWPSPLMISGARYSCVPTNDIDRASLGSAMS 735
TALPWPSPLMISGARYSCVPT +++RAS+GS S
Sbjct: 156 TALPWPSPLMISGARYSCVPTKELERASVGSTTS 55
Score = 48.7 bits (100), Expect(2) = 2e-041
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +1 / -2
Query: 352 SGGLAHLMSAQFTPSKKGCCLISVAP 429
SGG A + AQF PSKKGCCLIS AP
Sbjct: 438 SGGAAERIRAQFNPSKKGCCLISAAP 361
>gb|BF705043.1|BF705043 RHIZ2_1_F10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 639
Score = 235 bits (508), Expect(2) = 5e-063
Identities = 91/104 (87%), Positives = 98/104 (94%)
Frame = -2 / +1
Query: 638 AVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSARDLIRGLLVK 459
AVDWWTFG+FLYELLFGKTPFKGS NRATLFNV+GQ LRFPE P VSFSARD+IRGLLVK
Sbjct: 1 AVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDMIRGLLVK 180
Query: 458 EPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPKPVEIE 327
+PQ RL YKRGATEIKQHPFFEGVNWALIRCASPP++PKPVE+E
Sbjct: 181 DPQHRLGYKRGATEIKQHPFFEGVNWALIRCASPPDIPKPVELE 312
Score = 184 bits (397), Expect = 1e-045
Identities = 83/120 (69%), Positives = 87/120 (72%)
Frame = +1 / -2
Query: 277 ASSAAAPDGDEG*FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWG 456
A+ A P D F S STGFG SGGLAHLM AQFTPSKKGCC ISVAPRL SRC G
Sbjct: 362 ATGATFPFADGTCFGRHSSSTGFGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCG 183
Query: 457 SFTSRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQST 636
S TS PLI SLAEKLT G SG WP TL SVARL +PL GV PN++SYKN PKVHQST
Sbjct: 182 SLTSNPLIMSLAEKLTIGDSGNLKGWPTTLKSVARLPEPLNGVLPNNNSYKNMPKVHQST 3
Score = 122 bits (262), Expect = 4e-027
Identities = 55/102 (53%), Positives = 73/102 (71%)
Frame = +3 / -1
Query: 327 LDLDRLWYLRWACAPYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREADG 506
L+L+RLWY+ ACAPYE P+H LKE MLL L +TLV + +L +L Q+P +PRREA
Sbjct: 312 LELNRLWYVWRACAPYESPVHTLKERMLLYLGSTTLVPKSVLRVLD*QSPYHVPRREAHN 133
Query: 507 RVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQEYPEGPPV 632
L E Q LA+++E+ PVA + ER L +QQLVQEY +GPP+
Sbjct: 132 WGLWEPQGLAHNVEECSPVA*TFERGLAKQQLVQEYAKGPPI 7
Score = 116 bits (249), Expect = 3e-025
Identities = 56/112 (50%), Positives = 71/112 (63%)
Frame = -1 / +3
Query: 630 LVDLRGILVRAAVREDAFQGIQQPGHAVQCHWPAAALPGVPGRQLLGEGSDQGSACEGAP 451
LVDL ILVR V +D Q +QPG+ +Q PA +P VP +LL EG D+G A +G
Sbjct: 9 LVDLWHILVRVVVWQDPVQRFRQPGYTLQRCGPALEVPRVPNCELLCEGHDKGIASQGPA 188
Query: 450 ATAGLQAWSHGDQAASLL*GRELGAHKVRKPTGGTKACRDREAVKSSFIAVW 295
A +QAW + D+A S L*G ELG+HKVRKP+ TKAC R K+S I+ W
Sbjct: 189 APTWVQAWCYRDKATSFL*GCELGSHKVRKPSRHTKAC*ARVPPKASAISKW 344
Score = 27.2 bits (53), Expect(2) = 5e-063
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +1
Query: 260 QKGVDGYLEFGFF* 219
QKG D YLEF FF*
Sbjct: 367 QKGPDNYLEFEFF* 408
>gb|CN147521.1|CN147521 WOUND1_50_F12.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_50_F12_A002 3', mRNA sequence
Length = 763
Score = 236 bits (509), Expect = 4e-061
Identities = 94/128 (73%), Positives = 107/128 (83%)
Frame = -2 / +3
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
L+ EP+DARS SFVGTHEYLAPEIIKG+GHGSAVD WTFGVFLYELL+GKTPF+G N
Sbjct: 51 LVVEPTDARSNSFVGTHEYLAPEIIKGDGHGSAVDRWTFGVFLYELLYGKTPFRGPGNDE 230
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TL NV+ Q LRFP+ P+VS +A+DLIRGLLVKEP+ R RG EIKQHPFFEG+NWAL
Sbjct: 231 TLANVVSQNLRFPDNPSVSSNAKDLIRGLLVKEPENRFGSLRGVAEIKQHPFFEGLNWAL 410
Query: 374 IRCASPPE 351
IR +PPE
Sbjct: 411 IRSGAPPE 434
Score = 139 bits (299), Expect(2) = 1e-039
Identities = 61/94 (64%), Positives = 70/94 (74%)
Frame = +1 / -1
Query: 454 GSFTSRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQS 633
GSFTS+PLIRSLA LT G SG R T +V+ PLKGV P SS + TPKVH+S
Sbjct: 331 GSFTSKPLIRSLALLLTDGLSGNRRFCETTFANVSSFPGPLKGVLPYKSS*RKTPKVHRS 152
Query: 634 TALPWPSPLMISGARYSCVPTNDIDRASLGSAMS 735
TALPWPSPLMISGARYSCVPT +++RAS+GS S
Sbjct: 151 TALPWPSPLMISGARYSCVPTKELERASVGSTTS 50
Score = 44.6 bits (91), Expect(2) = 1e-039
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +1 / -1
Query: 352 SGGLAHLMSAQFTPSKKGCCLISVAP 429
SGG + AQF PSKKGCCLIS P
Sbjct: 433 SGGAPERIRAQFNPSKKGCCLISATP 356
>gb|CW223651.1|CW223651 104_659_11203029_148_37186_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11203029, DNA
sequence
Length = 726
Score = 137 bits (294), Expect(2) = 6e-060
Identities = 54/64 (84%), Positives = 57/64 (89%)
Frame = -2 / +1
Query: 707 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQ 528
SMSFVGTHEYLAPEII+GEGHGSAVDWWT G+FLYELL G TPFKG+ NRATL NVI Q
Sbjct: 1 SMSFVGTHEYLAPEIIRGEGHGSAVDWWTLGIFLYELLHGSTPFKGAGNRATLCNVIEQP 180
Query: 527 LRFP 516
LRFP
Sbjct: 181 LRFP 192
Score = 115 bits (245), Expect(2) = 6e-060
Identities = 45/62 (72%), Positives = 53/62 (85%)
Frame = -2 / +1
Query: 509 PAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPKPVEI 330
PAVS ARDLIRGLLVK+PQ+R+A+ RGATEIKQHPFFEGVNWAL+R +PP VP PV+
Sbjct: 214 PAVSSVARDLIRGLLVKDPQKRIAFTRGATEIKQHPFFEGVNWALVRSMTPPSVPDPVDF 393
Query: 329 ER 324
+
Sbjct: 394 RQ 399
Score = 109 bits (233), Expect(2) = 2e-043
Identities = 48/63 (76%), Positives = 51/63 (80%)
Frame = +1 / -2
Query: 517 GKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSCVPT 696
GKRS MTL+SVARL PLKGV P SSS + P VHQSTALPWPSP MISGARYSCVPT
Sbjct: 191 GKRSGCSMTLHSVARLPAPLKGVEPCSSS*RKMPSVHQSTALPWPSPRMISGARYSCVPT 12
Query: 697 NDI 705
ND+
Sbjct: 11 NDM 3
Score = 87.7 bits (185), Expect(2) = 2e-043
Identities = 40/59 (67%), Positives = 44/59 (74%)
Frame = +1 / -2
Query: 334 STGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTAG 510
STG GT GG+ L SAQ TPSK GCCLISVAP + A R GS TSRP +RSLA +LTAG
Sbjct: 389 STGSGTDGGVMLLTSAQLTPSKNGCCLISVAPLVKAIRFCGSLTSRPRMRSLATELTAG 213
>gb|BF422042.1|BF422042 FM1_12_C02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 591
Score = 222 bits (480), Expect = 4e-057
Identities = 87/114 (76%), Positives = 98/114 (85%)
Frame = -2 / +3
Query: 692 GTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQLRFPE 513
GTHEYLAPEIIKG+GHGSAVDWWTFGVFLYELL+GKTPF+G N TL NV+ Q LRFP+
Sbjct: 3 GTHEYLAPEIIKGDGHGSAVDWWTFGVFLYELLYGKTPFRGPGNDETLANVVSQNLRFPD 182
Query: 512 YPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPE 351
P+VS +A+DLIRGLLVKEP+ R RGA EIKQHPFFEG+NWALIR A+PPE
Sbjct: 183 NPSVSSNAKDLIRGLLVKEPENRFGSLRGAAEIKQHPFFEGLNWALIRSAAPPE 344
Score = 124 bits (265), Expect(2) = 5e-036
Identities = 55/80 (68%), Positives = 59/80 (73%)
Frame = +1 / -3
Query: 454 GSFTSRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQS 633
GSFTS+PLIRSLA LT G SG R T +V+ PLKGV P SS + TPKVHQS
Sbjct: 241 GSFTSKPLIRSLALLLTDGLSGNRRFCETTFANVSSFPGPLKGVLPYKSS*RKTPKVHQS 62
Query: 634 TALPWPSPLMISGARYSCVP 693
TALPWPSPLMISGARYSCVP
Sbjct: 61 TALPWPSPLMISGARYSCVP 2
Score = 48.3 bits (99), Expect(2) = 5e-036
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +1 / -3
Query: 352 SGGLAHLMSAQFTPSKKGCCLISVAP 429
SGG A + AQF PSKKGCCLIS AP
Sbjct: 343 SGGAAERIRAQFKPSKKGCCLISAAP 266
>gb|CW073807.1|CW073807 104_340_10781623_116_31470_103 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10781623, DNA
sequence
Length = 596
Score = 220 bits (474), Expect = 3e-056
Identities = 85/121 (70%), Positives = 99/121 (81%)
Frame = -2 / -3
Query: 677 LAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVS 498
LAPEII+G+GHG AVDWWTFG+FLYEL+ G TPFKGS NRATLFNV+ Q LRFP+ PAVS
Sbjct: 594 LAPEIIRGDGHGRAVDWWTFGIFLYELMHGATPFKGSGNRATLFNVVAQPLRFPDAPAVS 415
Query: 497 FSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPKPVEIERPS 318
+ARDLIRGLL KEP RLA +RGA E+KQHPFFEGVNWAL+R A PP +P ++ S
Sbjct: 414 AAARDLIRGLLAKEPHNRLASRRGAAEVKQHPFFEGVNWALVRSAQPPYIPDAAAVDHCS 235
Query: 317 N 315
+
Sbjct: 234 S 232
Score = 154 bits (330), Expect = 2e-036
Identities = 74/117 (63%), Positives = 78/117 (66%)
Frame = +1 / +2
Query: 328 SISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTA 507
S + G GG A L SAQ TPSKKGCC S APR ASR GS SRP +RSLA LTA
Sbjct: 245 STAAASGM*GGWALLTSAQLTPSKKGCCFTSAAPRRDASRLCGSLASRPRMRSLAAALTA 424
Query: 508 GYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGAR 678
G SG S TL SVAR +PLKGV P SS + PKVHQSTALPWPSP MISGAR
Sbjct: 425 GASGNLSGCATTLKSVARFPEPLKGVAPCMSS*RKMPKVHQSTALPWPSPRMISGAR 595
Score = 103 bits (219), Expect = 4e-021
Identities = 48/104 (46%), Positives = 69/104 (66%)
Frame = +3 / +1
Query: 366 APYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREADGRVLREAQLLANDI 545
AP E P+ A +E +LL L + +P++ LL +Q PD++P R AD R + E + L +D+
Sbjct: 283 APDECPVDAFEERVLLHLGRAAAGREPVVRLLGQQAPDEVPGRGADRRRVGEPERLRDDV 462
Query: 546 EQRGPVAGSLERRLPEQQLVQEYPEGPPVDGAAMALAFDDLGGQ 677
E+RG V G+LE R +LV+E EGPPVDG+A+A+A DDL Q
Sbjct: 463 EERGAVPGALEGRGAVHELVEEDAEGPPVDGSAVAVAADDLRRQ 594
>gb|BG357481.1|BG357481 OV2_30_D12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 658
Score = 213 bits (460), Expect(2) = 4e-056
Identities = 85/97 (87%), Positives = 90/97 (92%)
Frame = -2 / +2
Query: 611 FLYELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYK 432
FLYELLFGKTPFKGS NRATLFNV+GQ LRFPE P VSFSARDLIRGLLVK+PQ RL YK
Sbjct: 2 FLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYK 181
Query: 431 RGATEIKQHPFFEGVNWALIRCASPPEVPKPVEIERP 321
RG TEIKQHPFFEGVNWALIRCASPP+VPKPVE++RP
Sbjct: 182 RGTTEIKQHPFFEGVNWALIRCASPPDVPKPVELDRP 292
Score = 158 bits (339), Expect = 1e-037
Identities = 71/99 (71%), Positives = 75/99 (75%)
Frame = +1 / -2
Query: 316 FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAE 495
F G S STGFGTSGGLAH ++AQFTPSK GCCLISV PRL* RC GS TS PLI+SLAE
Sbjct: 297 FGGRSSSTGFGTSGGLAHRINAQFTPSKNGCCLISVVPRL*PRRCCGSLTSNPLIKSLAE 118
Query: 496 KLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKN 612
KLT G SG R P TL SVAR DPLKGV PN SS +N
Sbjct: 117 KLTIGDSGNRRG*PTTLKSVARFPDPLKGVLPNRSS*RN 1
Score = 26.3 bits (51), Expect(2) = 4e-056
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2 / +2
Query: 260 QKGVDGYLEFGFF*QTCGFFY 198
QKG D +LEF FF* F +
Sbjct: 338 QKGPDNFLEFEFF*SCFPFSF 400
>gb|CW308233.1|CW308233 104_796_11468560_116_35731_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468560, DNA
sequence
Length = 613
Score = 217 bits (468), Expect = 2e-055
Identities = 84/134 (62%), Positives = 102/134 (76%)
Frame = -2 / -3
Query: 731 IAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRAT 552
+AEP + RSMSFVGTHEYLAPEI+ GEGHGS+VDWWT GVF++ELL+G TPFKG T
Sbjct: 563 VAEPVELRSMSFVGTHEYLAPEIVSGEGHGSSVDWWTLGVFVFELLYGVTPFKGYDIEMT 384
Query: 551 LFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALI 372
L N++ + L FP PAVS +ARDL+ LL K+P +RL GA IK+HPFF GVNWAL+
Sbjct: 383 LANIVARALEFPRDPAVSSAARDLVTALLAKDPARRLGATVGAAAIKRHPFFGGVNWALL 204
Query: 371 RCASPPEVPKPVEI 330
RCA+PP VP P +
Sbjct: 203 RCATPPYVPPPFSV 162
Score = 134 bits (287), Expect = 2e-030
Identities = 70/135 (51%), Positives = 78/135 (57%)
Frame = +1 / +1
Query: 325 LSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLT 504
L+ G GT GG+A AQ TP K G LI+ AP + R GS + RSLA T
Sbjct: 157 LATLNGGGT*GGVAQRSRAQLTPPKNGWRLIAAAPTVAPRRRAGSLARSAVTRSLAADDT 336
Query: 505 AGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYS 684
AG G S L SV + PL GV P SS TP VHQST LP PSP ISGARYS
Sbjct: 337 AGSRGNSSARATMLASVISMS*PLNGVTP*RSSKTKTPSVHQSTELPCPSPDTISGARYS 516
Query: 685 CVPTNDIDRASLGSA 729
CVPTND+DR+S GSA
Sbjct: 517 CVPTNDMDRSSTGSA 561
>gb|BE594970.1|BE594970 PI1_48_B08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 645
Score = 210 bits (452), Expect(2) = 3e-055
Identities = 83/95 (87%), Positives = 89/95 (93%)
Frame = -2 / +3
Query: 611 FLYELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYK 432
FLYELLFGKTPFKGS NRATLFNV+GQ LRFPE P VSFSARD+IRGLLVK+PQ RL YK
Sbjct: 3 FLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDMIRGLLVKDPQHRLGYK 182
Query: 431 RGATEIKQHPFFEGVNWALIRCASPPEVPKPVEIE 327
RGATEIKQHPFFEGVNWALIRCASPP++PKPVE+E
Sbjct: 183 RGATEIKQHPFFEGVNWALIRCASPPDIPKPVELE 287
Score = 167 bits (360), Expect = 1e-040
Identities = 76/112 (67%), Positives = 80/112 (71%)
Frame = +1 / -3
Query: 277 ASSAAAPDGDEG*FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWG 456
A+ A P D F S STGFG SGGLAHLM AQFTPSKKGCC ISVAPRL SRC G
Sbjct: 337 ATGATFPFADGTCFGRHSSSTGFGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCG 158
Query: 457 SFTSRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKN 612
S TS PLI SLAEKLT G SG WP TL SVARL +PL GV PN++SYKN
Sbjct: 157 SLTSNPLIMSLAEKLTIGDSGNLKGWPTTLKSVARLPEPLNGVLPNNNSYKN 2
Score = 111 bits (236), Expect = 2e-023
Identities = 52/106 (49%), Positives = 67/106 (63%)
Frame = -1 / +2
Query: 612 ILVRAAVREDAFQGIQQPGHAVQCHWPAAALPGVPGRQLLGEGSDQGSACEGAPATAGLQ 433
ILVR V +D Q +QPG+ +Q PA +P VP +LL EG D+G A +G A +Q
Sbjct: 2 ILVRVVVWQDPVQRFRQPGYTLQRCGPALEVPRVPNCELLCEGHDKGIASQGPAAPTWVQ 181
Query: 432 AWSHGDQAASLL*GRELGAHKVRKPTGGTKACRDREAVKSSFIAVW 295
AW + D+A S L*G ELG+HKVRKP+ TKAC R K+S I+ W
Sbjct: 182 AWCYRDKATSFL*GCELGSHKVRKPSRHTKAC*ARVPPKASAISKW 319
Score = 109 bits (232), Expect = 6e-023
Identities = 51/95 (53%), Positives = 67/95 (70%)
Frame = +3 / -2
Query: 327 LDLDRLWYLRWACAPYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREADG 506
L+L+RLWY+ ACAPYE P+H LKE MLL L +TLV + +L +L Q+P +PRREA
Sbjct: 287 LELNRLWYVWRACAPYESPVHTLKERMLLYLGSTTLVPKSVLRVLD*QSPYHVPRREAHN 108
Query: 507 RVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQE 611
L E Q LA+++E+ PVA + ER L +QQLVQE
Sbjct: 107 WGLWEPQGLAHNVEECSPVA*TFERGLAKQQLVQE 3
Score = 27.2 bits (53), Expect(2) = 3e-055
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +3
Query: 260 QKGVDGYLEFGFF* 219
QKG D YLEF FF*
Sbjct: 342 QKGPDNYLEFEFF* 383
>gb|AW923900.1|AW923900 WS1_30_E12.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 569
Score = 188 bits (404), Expect(3) = 3e-055
Identities = 74/87 (85%), Positives = 80/87 (91%)
Frame = -2 / +2
Query: 581 PFKGSSNRATLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHP 402
PF+GS NRATLFNV+GQ LRFPE P VSFSARDLIRGLLVK+PQ RL YKRG TEIKQHP
Sbjct: 44 PFQGSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYKRGTTEIKQHP 223
Query: 401 FFEGVNWALIRCASPPEVPKPVEIERP 321
FFEGVNWALIRCASPP+VPKPVE++RP
Sbjct: 224 FFEGVNWALIRCASPPDVPKPVELDRP 304
Score = 142 bits (304), Expect(2) = 9e-036
Identities = 64/91 (70%), Positives = 68/91 (74%)
Frame = +1 / -3
Query: 316 FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAE 495
F G S STGFGTSGGLAH ++AQFTPSK GCCLISV PRL* RC GS TS PLI+SLAE
Sbjct: 309 FGGRSSSTGFGTSGGLAHRINAQFTPSKNGCCLISVVPRL*PRRCCGSLTSNPLIKSLAE 130
Query: 496 KLTAGYSGKRSCWPMTLNSVARLLDPLKGVF 588
KLT G SG R P TL SVAR DP KG +
Sbjct: 129 KLTIGDSGNRRG*PTTLKSVARFPDP*KGSY 37
Score = 41.4 bits (84), Expect(3) = 3e-055
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -2 / +3
Query: 623 TFGVFLYELLFGKTPFKG 570
T G+FLYELLFGKTPF+G
Sbjct: 3 TRGIFLYELLFGKTPFRG 56
Score = 29.5 bits (58), Expect(2) = 9e-036
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1 / -2
Query: 571 PLKGVFPNSSSYKNTPKV 624
PLKGV PN SS +N P V
Sbjct: 55 PLKGVLPNRSS*RNIPLV 2
Score = 26.3 bits (51), Expect(3) = 3e-055
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2 / +2
Query: 260 QKGVDGYLEFGFF*QTCGFFY 198
QKG D +LEF FF* F +
Sbjct: 350 QKGPDNFLEFEFF*SCFPFSF 412
>gb|CN126293.1|CN126293 RHOH1_16_G04.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_16_G04_A002 3', mRNA sequence
Length = 820
Score = 207 bits (446), Expect(2) = 3e-054
Identities = 84/101 (83%), Positives = 89/101 (88%)
Frame = -2 / +1
Query: 617 GVFLYELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLA 438
G F LLFGKTPFKGS NRATLFNV+GQ LRFPE P VSFSARDLIRGLLVK+PQ RL
Sbjct: 127 GSFQCLLLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLG 306
Query: 437 YKRGATEIKQHPFFEGVNWALIRCASPPEVPKPVEIERPSN 315
YKRG TEIKQHPFFEGVNWALIRCASPP+VPKPVE++RP N
Sbjct: 307 YKRGTTEIKQHPFFEGVNWALIRCASPPDVPKPVELDRPPN 429
Score = 157 bits (338), Expect = 1e-037
Identities = 71/103 (68%), Positives = 75/103 (72%)
Frame = +1 / -3
Query: 310 G*FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSL 489
G F G S STGFGTSGGLAH ++AQFTPSK GCCLISV PRL* RC GS TS PLI+SL
Sbjct: 434 GRFGGRSSSTGFGTSGGLAHRINAQFTPSKNGCCLISVVPRL*PRRCCGSLTSNPLIKSL 255
Query: 490 AEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTP 618
AEKLT G SG R P TL SVAR DPLKGV PN S + P
Sbjct: 254 AEKLTIGDSGNRRG*PTTLKSVARFPDPLKGVLPNRSKHWKDP 126
Score = 26.3 bits (51), Expect(2) = 3e-054
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2 / +3
Query: 260 QKGVDGYLEFGFF*QTCGFFY 198
QKG D +LEF FF* F +
Sbjct: 468 QKGPDNFLEFEFF*SCFPFSF 530
>gb|CF074385.1|CF074385 FE1_24_H07.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_24_H07_A002 3', mRNA sequence
Length = 635
Score = 202 bits (435), Expect(2) = 6e-053
Identities = 80/92 (86%), Positives = 86/92 (93%)
Frame = -2 / +3
Query: 602 ELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGA 423
ELLFGKTPFKGS NRATLFNV+GQ LRFPE P VSFSARD+IRGLLVK+PQ RL YKRGA
Sbjct: 3 ELLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDMIRGLLVKDPQHRLGYKRGA 182
Query: 422 TEIKQHPFFEGVNWALIRCASPPEVPKPVEIE 327
TEIKQHPFFEGVNWALIRCASPP++PKPVE+E
Sbjct: 183 TEIKQHPFFEGVNWALIRCASPPDIPKPVELE 278
Score = 159 bits (342), Expect = 4e-038
Identities = 73/109 (66%), Positives = 77/109 (70%)
Frame = +1 / -2
Query: 277 ASSAAAPDGDEG*FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWG 456
A+ A P D F S STGFG SGGLAHLM AQFTPSKKGCC ISVAPRL SRC G
Sbjct: 328 ATGATFPFADGTCFGRHSSSTGFGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCG 149
Query: 457 SFTSRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSS 603
S TS PLI SLAEKLT G SG WP TL SVARL +PL GV PN++S
Sbjct: 148 SLTSNPLIMSLAEKLTIGDSGNLKGWPTTLKSVARLPEPLNGVLPNNNS 2
Score = 105 bits (224), Expect = 8e-022
Identities = 49/103 (47%), Positives = 64/103 (62%)
Frame = -1 / +2
Query: 603 RAAVREDAFQGIQQPGHAVQCHWPAAALPGVPGRQLLGEGSDQGSACEGAPATAGLQAWS 424
R V +D Q +QPG+ +Q PA +P VP +LL EG D+G A +G A +QAW
Sbjct: 2 RVVVWQDPVQRFRQPGYTLQRCGPALEVPRVPNCELLCEGHDKGIASQGPAAPTWVQAWC 181
Query: 423 HGDQAASLL*GRELGAHKVRKPTGGTKACRDREAVKSSFIAVW 295
+ D+A S L*G ELG+HKVRKP+ TKAC R K+S I+ W
Sbjct: 182 YRDKATSFL*GCELGSHKVRKPSRHTKAC*ARVPPKASAISKW 310
Score = 102 bits (218), Expect = 5e-021
Identities = 48/92 (52%), Positives = 64/92 (69%)
Frame = +3 / -1
Query: 327 LDLDRLWYLRWACAPYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREADG 506
L+L+RLWY+ ACAPYE P+H LKE MLL L +TLV + +L +L Q+P +PRREA
Sbjct: 278 LELNRLWYVWRACAPYESPVHTLKERMLLYLGSTTLVPKSVLRVLD*QSPYHVPRREAHN 99
Query: 507 RVLREAQLLANDIEQRGPVAGSLERRLPEQQL 602
L E Q LA+++E+ PVA + ER L +QQL
Sbjct: 98 WGLWEPQGLAHNVEECSPVA*TFERGLAKQQL 3
Score = 27.2 bits (53), Expect(2) = 6e-053
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +3
Query: 260 QKGVDGYLEFGFF* 219
QKG D YLEF FF*
Sbjct: 333 QKGPDNYLEFEFF* 374
>gb|CX613644.1|CX613644 GABR1_9_H06.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_9_H06_A002 3', mRNA sequence
Length = 508
Score = 195 bits (421), Expect(2) = 2e-051
Identities = 78/94 (82%), Positives = 83/94 (88%)
Frame = -2 / +3
Query: 602 ELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGA 423
E LFGKTPFKG+ NR TLFNVIGQ LRFPEYP VSF ARDLIR LVKEPQQRL +KRGA
Sbjct: 3 EFLFGKTPFKGTGNRGTLFNVIGQPLRFPEYPVVSFPARDLIRSFLVKEPQQRLGFKRGA 182
Query: 422 TEIKQHPFFEGVNWALIRCASPPEVPKPVEIERP 321
TEIKQHPFFEGVNWALIRCASPPEVP+ +IE+P
Sbjct: 183 TEIKQHPFFEGVNWALIRCASPPEVPRHFDIEKP 284
Score = 154 bits (330), Expect = 2e-036
Identities = 69/106 (65%), Positives = 76/106 (71%)
Frame = +1 / -1
Query: 286 AAAPDGDEG*FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFT 465
AA D D G F G S+S GTSGGLA ++AQFTPSK GCC ISVAPRL +RCWGS T
Sbjct: 319 AALSDVDTGCFGGFSMSKCLGTSGGLAQRINAQFTPSKNGCCFISVAPRLKPNRCWGSLT 140
Query: 466 SRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSS 603
+ LI+SLA KLT GYSGKR PMTLNSV R PL GVFPN +S
Sbjct: 139 RKLLIKSLAGKLTTGYSGKRKG*PMTLNSVPRFPVPLNGVFPNRNS 2
Score = 28.1 bits (55), Expect(2) = 2e-051
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +3
Query: 260 QKGVDGYLEFGFF* 219
Q G D YLEFGFF*
Sbjct: 321 QNGGDNYLEFGFF* 362
>gb|CD427064.1|CD427064 SA1_17_G05.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_17_G05_A002 3', mRNA sequence
Length = 652
Score = 202 bits (436), Expect = 4e-051
Identities = 84/130 (64%), Positives = 96/130 (73%)
Frame = -2 / +3
Query: 608 LYELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKR 429
L+ELL+GKTPFKGS NRATLFNV+GQQL+FPE P+ S+S+RD IRGLLVKEPQ RL KR
Sbjct: 3 LHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPSTSYSSRDPIRGLLVKEPQSRLGVKR 182
Query: 428 GATEIKQHPFFEGVNWALIRCASPPEVPKPVEIERPSNHXXXXXXXXXXXXXXXXPQKGV 249
GATEIKQHPFFEGVNWALIRC++PPEVP+PVE E P + K
Sbjct: 183 GATEIKQHPFFEGVNWALIRCSTPPEVPRPVEAELPVKYGVAEAIGSNSKRIAGADVKSG 362
Query: 248 DGYLEFGFF* 219
YL+F FF*
Sbjct: 363 GKYLDFEFF* 392
Score = 134 bits (288), Expect = 1e-030
Identities = 62/98 (63%), Positives = 66/98 (67%)
Frame = +1 / -1
Query: 316 FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAE 495
F G S STG GTSGG+ H M AQFTPSKKGCCLISVAPR R GS T PL+ SL E
Sbjct: 295 FTGSSASTGLGTSGGVLHRMRAQFTPSKKGCCLISVAPRFTPRRLCGSLTRSPLMGSLLE 116
Query: 496 KLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYK 609
L G SG SC P TLN VAR DPL GV P SSS++
Sbjct: 115 *LVDGDSGNFSC*PTTLNKVARFPDPLNGVLPYSSSWR 2
>gb|BG052508.1|BG052508 RHIZ2_26_A04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 520
Score = 200 bits (432), Expect = 2e-050
Identities = 83/127 (65%), Positives = 94/127 (74%)
Frame = -2 / +2
Query: 599 LLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGAT 420
LL+GKTPFKGS NRATLFNV+GQQL+FPE P+ S+S+RDLIRGLLVKEPQ RL KRGAT
Sbjct: 2 LLYGKTPFKGSGNRATLFNVVGQQLKFPESPSTSYSSRDLIRGLLVKEPQSRLGVKRGAT 181
Query: 419 EIKQHPFFEGVNWALIRCASPPEVPKPVEIERPSNHXXXXXXXXXXXXXXXXPQKGVDGY 240
EIKQHPFFEGVNWALIRC++PPEVP+PVE E P + K Y
Sbjct: 182 EIKQHPFFEGVNWALIRCSTPPEVPRPVEAELPVKYGVAEAIGSNSKRIAGADVKSGGKY 361
Query: 239 LEFGFF* 219
L+F FF*
Sbjct: 362 LDFEFF* 382
Score = 133 bits (286), Expect = 2e-030
Identities = 62/95 (65%), Positives = 64/95 (67%)
Frame = +1 / -2
Query: 316 FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAE 495
F G S STG GTSGG+ H M AQFTPSKKGCCLISVAPR R GS T PL+RSL E
Sbjct: 285 FTGSSASTGLGTSGGVLHRMRAQFTPSKKGCCLISVAPRFTPRRLCGSLTRSPLMRSLLE 106
Query: 496 KLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSS 600
L G SG SC P TLN VAR DPL GV P SS
Sbjct: 105 *LVDGDSGNFSC*PTTLNRVARFPDPLNGVLPYSS 1
>gb|CN126382.1|CN126382 RHOH1_16_G04.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_16_G04_A002 5', mRNA sequence
Length = 724
Score = 198 bits (427), Expect = 8e-050
Identities = 81/96 (84%), Positives = 85/96 (88%)
Frame = -2 / +2
Query: 617 GVFLYELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLA 438
G F LLFGKTPFKGS NRATLFNV+GQ LRFPE P VSFSARDLIRGLLVK+PQ RL
Sbjct: 437 GSFQCLLLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLG 616
Query: 437 YKRGATEIKQHPFFEGVNWALIRCASPPEVPKPVEI 330
YKRG TEIKQHPFFEGVNWALIRCASPP+VPKPVE+
Sbjct: 617 YKRGTTEIKQHPFFEGVNWALIRCASPPDVPKPVEL 724
Score = 151 bits (325), Expect = 9e-036
Identities = 67/95 (70%), Positives = 71/95 (74%)
Frame = +1 / -2
Query: 334 STGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTAGY 513
STGFGTSGGLAH ++AQFTPSK GCCLISV PRL* RC GS TS PLI+SLAEKLT G
Sbjct: 720 STGFGTSGGLAHRINAQFTPSKNGCCLISVVPRL*PRRCCGSLTSNPLIKSLAEKLTIGD 541
Query: 514 SGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTP 618
SG R P TL SVAR DPLKGV PN S + P
Sbjct: 540 SGNRRG*PTTLKSVARFPDPLKGVLPNRSKHWKDP 436
>gb|CW311717.1|CW311717 104_801_11470377_116_36277_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470377, DNA
sequence
Length = 698
Score = 138 bits (295), Expect(2) = 2e-049
Identities = 51/79 (64%), Positives = 61/79 (77%)
Frame = -2 / -3
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
L+ EP ARS SFVGTHEYLAPE+I G+GHGSAVDWWT GVF+YE+++G+TPFKG +N
Sbjct: 600 LVVEPVSARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFMYEMMYGRTPFKGENNEK 421
Query: 554 TLFNVIGQQLRFPEYPAVS 498
TL N+I Q L FP S
Sbjct: 420 TLVNIIKQPLAFPRVAVAS 364
Score = 107 bits (229), Expect(2) = 9e-032
Identities = 48/79 (60%), Positives = 50/79 (63%)
Frame = +1 / +2
Query: 499 LTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGAR 678
L GK S M L SV L PL GV P SY NTP VHQSTALPWP P + SGAR
Sbjct: 365 LATATRGKASGCLMMLTSVFSLFSPLNGVRPYIISYMNTPSVHQSTALPWPCPEITSGAR 544
Query: 679 YSCVPTNDIDRASLGSAMS 735
YSCVPTND+DRA GS S
Sbjct: 545 YSCVPTNDLDRAETGSTTS 601
Score = 79.4 bits (167), Expect(2) = 2e-049
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = -2 / -3
Query: 491 ARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPKPVEIERPS 318
A+DL+ LL K P++RL G+ E+K+H FF+GVNWAL+R PPEVPKP + P+
Sbjct: 336 AQDLMTQLLAKNPKKRLGSCTGSAEVKRHDFFKGVNWALVRSVRPPEVPKPPVVPAPA 163
Score = 78.0 bits (164), Expect(2) = 7e-021
Identities = 39/76 (51%), Positives = 48/76 (63%)
Frame = +3 / +1
Query: 483 IPRREADGRVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQEYPEGPPVDGAAMALAFD 662
+P A R RE Q L +D++QR V +LERR P LV E+P+ PPVDGAA+AL D
Sbjct: 349 VPLPAAGHRDTREGQRLLDDVDQRLLVVLALERRPPVHHLVHEHPQRPPVDGAAVALPGD 528
Query: 663 DLGGQVLVRPNERHRP 710
L QVLVR +ER P
Sbjct: 529 HLRRQVLVRAHERLGP 576
Score = 50.6 bits (104), Expect(2) = 9e-032
Identities = 26/62 (41%), Positives = 31/62 (50%)
Frame = +1 / +2
Query: 322 GLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKL 501
G + G GTSGG L SAQFTP KK C S P SR G +IRS A +
Sbjct: 167 GAGTTGGLGTSGGRTDLTSAQFTPLKKSCLFTSADPVQLPSRFLGFLARSWVIRSCARRC 346
Query: 502 TA 507
++
Sbjct: 347 SS 352
Score = 43.7 bits (89), Expect(2) = 7e-021
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +3 / +1
Query: 339 RLWYLRWACAPYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRRE 497
RL +L P ERP+HAL+E + L LR QPLLG+L ++ Q+ R +
Sbjct: 184 RLGHLGGTD*PDERPVHALEEVVPLHLRRPRAAAQPLLGVLGQELGHQVLRAQ 342
>gb|CF485574.1|CF485574 POL1_32_G12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_32_G12_A002 3', mRNA sequence
Length = 563
Score = 189 bits (408), Expect(2) = 5e-049
Identities = 75/87 (86%), Positives = 80/87 (91%)
Frame = -2 / +2
Query: 581 PFKGSSNRATLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHP 402
PFKGS NRATLFNV+GQ LRFPE P VSFSARDLIRGLLVK+PQ RL YKRG TEIKQHP
Sbjct: 2 PFKGSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYKRGTTEIKQHP 181
Query: 401 FFEGVNWALIRCASPPEVPKPVEIERP 321
FFEGVNWALIRCASPP+VPKPVE++RP
Sbjct: 182 FFEGVNWALIRCASPPDVPKPVELDRP 262
Score = 145 bits (311), Expect = 8e-034
Identities = 65/89 (73%), Positives = 68/89 (76%)
Frame = +1 / -3
Query: 316 FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAE 495
F G S STGFGTSGGLAH ++AQFTPSK GCCLISV PRL* RC GS TS PLI+SLAE
Sbjct: 267 FGGRSSSTGFGTSGGLAHRINAQFTPSKNGCCLISVVPRL*PRRCCGSLTSNPLIKSLAE 88
Query: 496 KLTAGYSGKRSCWPMTLNSVARLLDPLKG 582
KLT G SG R P TL SVAR DPLKG
Sbjct: 87 KLTIGDSGNRRG*PTTLKSVARFPDPLKG 1
Score = 26.3 bits (51), Expect(2) = 5e-049
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2 / +2
Query: 260 QKGVDGYLEFGFF*QTCGFFY 198
QKG D +LEF FF* F +
Sbjct: 308 QKGPDNFLEFEFF*SCFPFSF 370
>gb|BF480784.1|BF480784 FM1_14_H09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 569
Score = 182 bits (393), Expect(2) = 3e-047
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = -2 / +3
Query: 578 FKGSSNRATLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPF 399
FKGS NRATLFNV+GQ LRFPE P VSFSARD+IRGLLVK+PQ RL YKRGATEIKQHPF
Sbjct: 3 FKGSGNRATLFNVVGQPLRFPESPIVSFSARDMIRGLLVKDPQHRLGYKRGATEIKQHPF 182
Query: 398 FEGVNWALIRCASPPEVPKPVEIE 327
FEGVNWALIRCASPP++PKPVE+E
Sbjct: 183 FEGVNWALIRCASPPDIPKPVELE 254
Score = 146 bits (313), Expect = 4e-034
Identities = 68/100 (68%), Positives = 70/100 (70%)
Frame = +1 / -2
Query: 277 ASSAAAPDGDEG*FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWG 456
A+ A P D F S STGFG SGGLAHLM AQFTPSKKGCC ISVAPRL SRC G
Sbjct: 304 ATGATFPFADGTCFGRHSSSTGFGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCG 125
Query: 457 SFTSRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPL 576
S TS PLI SLAEKLT G SG WP TL SVARL +PL
Sbjct: 124 SLTSNPLIMSLAEKLTIGDSGNLKGWPTTLKSVARLPEPL 5
Score = 27.2 bits (53), Expect(2) = 3e-047
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +3
Query: 260 QKGVDGYLEFGFF* 219
QKG D YLEF FF*
Sbjct: 309 QKGPDNYLEFEFF* 350
>gb|CD423436.1|CD423436 SA1_23_C04.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_23_C04_A002 3', mRNA sequence
Length = 643
Score = 181 bits (390), Expect(2) = 2e-046
Identities = 72/84 (85%), Positives = 77/84 (91%)
Frame = -2 / +3
Query: 572 GSSNRATLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFE 393
GS NRATLFNV+GQ LRFPE P VSFSARDLIRGLLVK+PQ RL YKRG TEIKQHPFFE
Sbjct: 3 GSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYKRGTTEIKQHPFFE 182
Query: 392 GVNWALIRCASPPEVPKPVEIERP 321
GVNWALIRCASPP+VPKPVE++RP
Sbjct: 183 GVNWALIRCASPPDVPKPVELDRP 254
Score = 138 bits (296), Expect = 9e-032
Identities = 62/86 (72%), Positives = 65/86 (75%)
Frame = +1 / -1
Query: 316 FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAE 495
F G S STGFGTSGGLAH ++AQFTPSK GCCLISV PRL* RC GS TS PLI+SLAE
Sbjct: 259 FGGRSSSTGFGTSGGLAHRINAQFTPSKNGCCLISVVPRL*PRRCCGSLTSNPLIKSLAE 80
Query: 496 KLTAGYSGKRSCWPMTLNSVARLLDP 573
KLT G SG R P TL SVAR DP
Sbjct: 79 KLTIGDSGNRRG*PTTLKSVARFPDP 2
Score = 26.3 bits (51), Expect(2) = 2e-046
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2 / +3
Query: 260 QKGVDGYLEFGFF*QTCGFFY 198
QKG D +LEF FF* F +
Sbjct: 300 QKGPDNFLEFEFF*SCFPFSF 362
>gb|CW403690.1|CW403690 fsbb001f095i13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f095i13, DNA
sequence
Length = 615
Score = 160 bits (343), Expect(2) = 2e-046
Identities = 64/90 (71%), Positives = 74/90 (82%)
Frame = -2 / -1
Query: 620 FGVFLYELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRL 441
FGVFLYELL+GKTPF+G N TL NV+ Q LRFP+ P+VS +A+DLIRGLLVKEP+ R
Sbjct: 564 FGVFLYELLYGKTPFRGPGNDETLANVVSQNLRFPDNPSVSSNAKDLIRGLLVKEPENRF 385
Query: 440 AYKRGATEIKQHPFFEGVNWALIRCASPPE 351
RGA EIKQHPFFEG+NWALIR A+PPE
Sbjct: 384 GSLRGAAEIKQHPFFEGLNWALIRSAAPPE 295
Score = 63.4 bits (132), Expect(3) = 4e-026
Identities = 31/56 (55%), Positives = 35/56 (62%)
Frame = +1 / +2
Query: 454 GSFTSRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPK 621
GSFTS+PLIRSLA LT G SG R T +V+ PLKGV P SS + TPK
Sbjct: 398 GSFTSKPLIRSLALLLTDGLSGNRRFCETTFANVSSFPGPLKGVLPYKSS*RKTPK 565
Score = 48.7 bits (100), Expect(3) = 4e-026
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +1 / +2
Query: 352 SGGLAHLMSAQFTPSKKGCCLISVAP 429
SGG A + AQF PSKKGCCLIS AP
Sbjct: 296 SGGAAERIRAQFNPSKKGCCLISAAP 373
Score = 47.3 bits (97), Expect(2) = 2e-046
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -2 / -3
Query: 668 EIIKGEGHGSAVDWWTF 618
EIIKG+GHGSAVDWWTF
Sbjct: 613 EIIKGDGHGSAVDWWTF 563
Score = 45.1 bits (92), Expect(3) = 4e-026
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1 / +3
Query: 619 KVHQSTALPWPSPLMIS 669
KVHQSTALPWPSPLMIS
Sbjct: 564 KVHQSTALPWPSPLMIS 614
>gb|CN147606.1|CN147606 WOUND1_50_F12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_50_F12_A002 5', mRNA sequence
Length = 818
Score = 182 bits (391), Expect = 7e-045
Identities = 72/93 (77%), Positives = 82/93 (88%)
Frame = -2 / +1
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
L+ EP+DARS SFVGTHEYLAPEIIKG+GHGSAVDWWTFGVFLYELL+GKTPF+G N
Sbjct: 538 LVVEPTDARSNSFVGTHEYLAPEIIKGDGHGSAVDWWTFGVFLYELLYGKTPFRGPGNDE 717
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKE 456
TL NV+ Q LRFP+ P+VS +A+DLIRGLLVKE
Sbjct: 718 TLANVVSQNLRFPDNPSVSSNAKDLIRGLLVKE 816
Score = 141 bits (303), Expect = 1e-032
Identities = 62/94 (65%), Positives = 70/94 (74%)
Frame = +1 / -1
Query: 454 GSFTSRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQS 633
GSFTS+PLIRSLA LT G SG R T +V+ PLKGV P SS + TPKVHQS
Sbjct: 818 GSFTSKPLIRSLALLLTDGLSGNRRFCETTFANVSSFPGPLKGVLPYKSS*RKTPKVHQS 639
Query: 634 TALPWPSPLMISGARYSCVPTNDIDRASLGSAMS 735
TALPWPSPLMISGARYSCVPT +++RAS+GS S
Sbjct: 638 TALPWPSPLMISGARYSCVPTKELERASVGSTTS 537
>gb|CW088288.1|CW088288 104_433_10948097_114_32572_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948097, DNA
sequence
Length = 640
Score = 123 bits (263), Expect(2) = 9e-045
Identities = 43/73 (58%), Positives = 58/73 (79%)
Frame = -2 / -1
Query: 731 IAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRAT 552
+AEP+ A S VGTHEYLAPE++ G GHG+ VDWW FGVFLYEL++G+TPFKG + AT
Sbjct: 472 VAEPTAASSKDCVGTHEYLAPELVSGSGHGNGVDWWAFGVFLYELVYGRTPFKGHTKEAT 293
Query: 551 LFNVIGQQLRFPE 513
L N++ +Q+ +P+
Sbjct: 292 LKNILSKQVTYPQ 254
Score = 90.9 bits (192), Expect(2) = 2e-026
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +1 / +3
Query: 526 SCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSCVPTNDI 705
+C VA L+ PLKGV P +SS + TPK HQST LPWP PL SGARYSCVPT +
Sbjct: 267 TCLERMFLRVASLVWPLKGVRP*TSS*RKTPKAHQSTPLPWPLPLTSSGARYSCVPTQSL 446
Query: 706 DRASLGSA 729
+ A++GSA
Sbjct: 447 ELAAVGSA 470
Score = 78.5 bits (165), Expect(2) = 9e-045
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = -2 / -1
Query: 488 RDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVP 345
RDL+ LL ++P++R+ RGA EIK+HPFF GV+WALIRC +PP VP
Sbjct: 223 RDLVGRLLERDPRRRMGATRGAAEIKRHPFFAGVDWALIRCVAPPVVP 80
Score = 49.6 bits (102), Expect(2) = 2e-026
Identities = 27/57 (47%), Positives = 34/57 (59%)
Frame = +1 / +3
Query: 346 GTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTAGYS 516
GT+GG H M AQ TP+KKG LIS APR+ R GS +S RS + + +A S
Sbjct: 81 GTTGGATHRMRAQSTPAKKGWRLISAAPRVAPMRRRGSRSSSRPTRSRSWEASASPS 251
>gb|CW088290.1|CW088290 104_433_10948097_250_32620_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948097, DNA
sequence
Length = 612
Score = 123 bits (263), Expect(2) = 9e-045
Identities = 43/73 (58%), Positives = 58/73 (79%)
Frame = -2 / -3
Query: 731 IAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRAT 552
+AEP+ A S VGTHEYLAPE++ G GHG+ VDWW FGVFLYEL++G+TPFKG + AT
Sbjct: 445 VAEPTAASSKDCVGTHEYLAPELVSGSGHGNGVDWWAFGVFLYELVYGRTPFKGHTKEAT 266
Query: 551 LFNVIGQQLRFPE 513
L N++ +Q+ +P+
Sbjct: 265 LKNILSKQVTYPQ 227
Score = 90.9 bits (192), Expect(2) = 2e-026
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +1 / +3
Query: 526 SCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSCVPTNDI 705
+C VA L+ PLKGV P +SS + TPK HQST LPWP PL SGARYSCVPT +
Sbjct: 240 TCLERMFLRVASLVWPLKGVRP*TSS*RKTPKAHQSTPLPWPLPLTSSGARYSCVPTQSL 419
Query: 706 DRASLGSA 729
+ A++GSA
Sbjct: 420 ELAAVGSA 443
Score = 78.5 bits (165), Expect(2) = 9e-045
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = -2 / -3
Query: 488 RDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVP 345
RDL+ LL ++P++R+ RGA EIK+HPFF GV+WALIRC +PP VP
Sbjct: 196 RDLVGRLLERDPRRRMGATRGAAEIKRHPFFAGVDWALIRCVAPPVVP 53
Score = 49.6 bits (102), Expect(2) = 2e-026
Identities = 27/57 (47%), Positives = 34/57 (59%)
Frame = +1 / +3
Query: 346 GTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTAGYS 516
GT+GG H M AQ TP+KKG LIS APR+ R GS +S RS + + +A S
Sbjct: 54 GTTGGATHRMRAQSTPAKKGWRLISAAPRVAPMRRRGSRSSSRPTRSRSWEASASPS 224
>gb|BE596005.1|BE596005 PI1_51_B03.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 644
Score = 178 bits (384), Expect = 7e-044
Identities = 69/125 (55%), Positives = 89/125 (71%)
Frame = -2 / +2
Query: 707 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQ 528
S SFVGT EY+APEII G GH SAVDWW G+ LYE+L+G TPF+G + + T N++ +
Sbjct: 68 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 247
Query: 527 LRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEV 348
+RFP VS +AR LI LL ++P RL GA EIKQHPFF G+NWAL+R A+PPE+
Sbjct: 248 IRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAIEIKQHPFFRGINWALVRAATPPEL 427
Query: 347 PKPVE 333
P++
Sbjct: 428 EAPLQ 442
Score = 120 bits (256), Expect = 3e-026
Identities = 60/123 (48%), Positives = 71/123 (57%)
Frame = +1 / -3
Query: 340 GFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTAGYSG 519
G SGG+A AQF P KKGCCLIS+AP S GS S I LA +LT +G
Sbjct: 435 GASNSGGVAARTRAQFMPRKKGCCLISIAPS*EPSLFAGSRCSNLYINCLAARLT*MLAG 256
Query: 520 KRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSCVPTN 699
L V L+ PLKGV P + SY+ P HQSTAL WP+P++ISGA YS VPT
Sbjct: 255 NLISLCRILAKVLCLVFPLKGV*PYNISYRRIPSAHQSTALVWPAPVIISGAMYSSVPTK 76
Query: 700 DID 708
+ D
Sbjct: 75 EFD 67
>gb|BM329541.1|BM329541 PIC1_39_D08.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 657
Score = 178 bits (384), Expect = 7e-044
Identities = 69/125 (55%), Positives = 89/125 (71%)
Frame = -2 / +3
Query: 707 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQ 528
S SFVGT EY+APEII G GH SAVDWW G+ LYE+L+G TPF+G + + T N++ +
Sbjct: 45 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 224
Query: 527 LRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEV 348
+RFP VS +AR LI LL ++P RL GA EIKQHPFF G+NWAL+R A+PPE+
Sbjct: 225 IRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAIEIKQHPFFRGINWALVRAATPPEL 404
Query: 347 PKPVE 333
P++
Sbjct: 405 EAPLQ 419
Score = 120 bits (256), Expect = 3e-026
Identities = 60/123 (48%), Positives = 71/123 (57%)
Frame = +1 / -3
Query: 340 GFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTAGYSG 519
G SGG+A AQF P KKGCCLIS+AP S GS S I LA +LT +G
Sbjct: 412 GASNSGGVAARTRAQFMPRKKGCCLISIAPS*EPSLFAGSRCSNLYINCLAARLT*MLAG 233
Query: 520 KRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSCVPTN 699
L V L+ PLKGV P + SY+ P HQSTAL WP+P++ISGA YS VPT
Sbjct: 232 NLISLCRILAKVLCLVFPLKGV*PYNISYRRIPSAHQSTALVWPAPVIISGAMYSSVPTK 53
Query: 700 DID 708
+ D
Sbjct: 52 EFD 44
>gb|CD462204.1|CD462204 SA1_40_B09.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_40_B09_A002 3', mRNA sequence
Length = 674
Score = 178 bits (384), Expect = 7e-044
Identities = 69/125 (55%), Positives = 89/125 (71%)
Frame = -2 / +3
Query: 707 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQ 528
S SFVGT EY+APEII G GH SAVDWW G+ LYE+L+G TPF+G + + T N++ +
Sbjct: 81 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 260
Query: 527 LRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEV 348
+RFP VS +AR LI LL ++P RL GA EIKQHPFF G+NWAL+R A+PPE+
Sbjct: 261 IRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAIEIKQHPFFRGINWALVRAATPPEL 440
Query: 347 PKPVE 333
P++
Sbjct: 441 EAPLQ 455
Score = 120 bits (256), Expect = 3e-026
Identities = 60/123 (48%), Positives = 71/123 (57%)
Frame = +1 / -2
Query: 340 GFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTAGYSG 519
G SGG+A AQF P KKGCCLIS+AP S GS S I LA +LT +G
Sbjct: 448 GASNSGGVAARTRAQFMPRKKGCCLISIAPS*EPSLFAGSRCSNLYINCLAARLT*MLAG 269
Query: 520 KRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSCVPTN 699
L V L+ PLKGV P + SY+ P HQSTAL WP+P++ISGA YS VPT
Sbjct: 268 NLISLCRILAKVLCLVFPLKGV*PYNISYRRIPSAHQSTALVWPAPVIISGAMYSSVPTK 89
Query: 700 DID 708
+ D
Sbjct: 88 EFD 80
>gb|AW679681.1|AW679681 WS1_30_E12.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 637
Score = 170 bits (365), Expect(2) = 4e-043
Identities = 67/78 (85%), Positives = 72/78 (92%)
Frame = -2 / +3
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TLFNV+GQ LRFPE P VSFSARDLIRGLLVK+PQ RL YKRG TEIKQHPFFEGVNWAL
Sbjct: 3 TLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYKRGTTEIKQHPFFEGVNWAL 182
Query: 374 IRCASPPEVPKPVEIERP 321
IRCASPP+VPKPVE++RP
Sbjct: 183 IRCASPPDVPKPVELDRP 236
Score = 129 bits (277), Expect = 4e-029
Identities = 58/80 (72%), Positives = 61/80 (76%)
Frame = +1 / -1
Query: 316 FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAE 495
F G S STGFGTSGGLAH ++AQFTPSK GCCLISV PRL* RC GS TS PLI+SLAE
Sbjct: 241 FGGRSSSTGFGTSGGLAHRINAQFTPSKNGCCLISVVPRL*PRRCCGSLTSNPLIKSLAE 62
Query: 496 KLTAGYSGKRSCWPMTLNSV 555
KLT G SG R P TL SV
Sbjct: 61 KLTIGDSGNRRG*PTTLKSV 2
Score = 26.3 bits (51), Expect(2) = 4e-043
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2 / +3
Query: 260 QKGVDGYLEFGFF*QTCGFFY 198
QKG D +LEF FF* F +
Sbjct: 282 QKGPDNFLEFEFF*SCFPFSF 344
>gb|BG053517.1|BG053517 RHIZ2_10_B08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 515
Score = 164 bits (352), Expect(2) = 1e-041
Identities = 64/75 (85%), Positives = 70/75 (93%)
Frame = -2 / +2
Query: 551 LFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALI 372
LFNV+GQ LRFPE P VSFSARD+IRGLLVK+PQ RL YKRGATEIKQHPFFEGVNWALI
Sbjct: 2 LFNVVGQPLRFPESPIVSFSARDMIRGLLVKDPQHRLGYKRGATEIKQHPFFEGVNWALI 181
Query: 371 RCASPPEVPKPVEIE 327
RCASPP++PKPVE+E
Sbjct: 182 RCASPPDIPKPVELE 226
Score = 133 bits (286), Expect = 2e-030
Identities = 62/92 (67%), Positives = 63/92 (68%)
Frame = +1 / -3
Query: 277 ASSAAAPDGDEG*FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWG 456
A+ A P D F S STGFG SGGLAHLM AQFTPSKKGCC ISVAPRL SRC G
Sbjct: 276 ATGATFPFADGTCFGRHSSSTGFGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCG 97
Query: 457 SFTSRPLIRSLAEKLTAGYSGKRSCWPMTLNS 552
S TS PLI SLAEKLT G SG WP TL S
Sbjct: 96 SLTSNPLIMSLAEKLTIGDSGNLKGWPTTLKS 1
Score = 27.2 bits (53), Expect(2) = 1e-041
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +2
Query: 260 QKGVDGYLEFGFF* 219
QKG D YLEF FF*
Sbjct: 281 QKGPDNYLEFEFF* 322
>gb|CW430454.1|CW430454 fsbb001f144c20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f144c20, DNA
sequence
Length = 611
Score = 168 bits (362), Expect = 7e-041
Identities = 70/112 (62%), Positives = 80/112 (71%)
Frame = -2 / +1
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TLFNV+GQQL+FPE P+ S+S+RDLIRGLLVKEPQ RL KRGATEIKQHPFFEGVNWAL
Sbjct: 1 TLFNVVGQQLKFPESPSTSYSSRDLIRGLLVKEPQSRLGVKRGATEIKQHPFFEGVNWAL 180
Query: 374 IRCASPPEVPKPVEIERPSNHXXXXXXXXXXXXXXXXPQKGVDGYLEFGFF* 219
IRC++PPEVP+PVE E P + K YL+F FF*
Sbjct: 181 IRCSTPPEVPRPVEAELPVKYGVAEAIGSNSKRIAGADVKSGGKYLDFEFF* 336
Score = 111 bits (237), Expect = 1e-023
Identities = 51/78 (65%), Positives = 53/78 (67%)
Frame = +1 / -1
Query: 316 FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAE 495
F G S STG GTSGG+ H M AQFTPSKKGCCLISVAPR R GS T PL+RSL E
Sbjct: 239 FTGSSASTGLGTSGGVLHRMRAQFTPSKKGCCLISVAPRFTPRRLCGSLTRSPLMRSLLE 60
Query: 496 KLTAGYSGKRSCWPMTLN 549
L G SG SC P TLN
Sbjct: 59 *LVDGDSGNFSC*PTTLN 6
>gb|CW368244.1|CW368244 fsbb001f042b22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f042b22, DNA
sequence
Length = 403
Score = 165 bits (355), Expect = 7e-040
Identities = 64/90 (71%), Positives = 76/90 (84%)
Frame = -2 / -2
Query: 602 ELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGA 423
EL++GK PFKG + RATLFNV+GQQL+FP+ P S ++RDLI+GLL KEPQ RL KRGA
Sbjct: 402 ELMYGKPPFKGQTTRATLFNVVGQQLKFPDCPGTSNASRDLIKGLLAKEPQSRLGVKRGA 223
Query: 422 TEIKQHPFFEGVNWALIRCASPPEVPKPVE 333
EIKQHPFFEGVNWALIRC++PP VP+ VE
Sbjct: 222 AEIKQHPFFEGVNWALIRCSTPPGVPRAVE 133
Score = 127 bits (273), Expect = 1e-028
Identities = 56/90 (62%), Positives = 61/90 (67%)
Frame = +1 / +2
Query: 334 STGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTAGY 513
ST GT GG+ H +SAQ TPSKKGCC IS APRL SR WGS SRPL+RSL L G
Sbjct: 134 STALGTPGGVLHRISAQLTPSKKGCCFISAAPRLTPSRLWGSLASRPLMRSLLALLVPGQ 313
Query: 514 SGKRSCWPMTLNSVARLLDPLKGVFPNSSS 603
SG SC P TLNSVAR++ PL G P SS
Sbjct: 314 SGNLSCCPTTLNSVARVVCPLNGGLPYMSS 403
>gb|CW280288.1|CW280288 104_755_11407540_148_35446_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11407540, DNA
sequence
Length = 652
Score = 155 bits (334), Expect = 5e-037
Identities = 60/71 (84%), Positives = 65/71 (91%)
Frame = -2 / +3
Query: 728 AEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATL 549
AEP+ ARSMSFVGTHEYLAPEII+G+GHGSAVDWWTFG+FLYELL G TPFKGS NRATL
Sbjct: 435 AEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFLYELLHGATPFKGSGNRATL 614
Query: 548 FNVIGQQLRFP 516
FNV+ Q LRFP
Sbjct: 615 FNVVAQPLRFP 647
Score = 110 bits (234), Expect = 3e-023
Identities = 49/73 (67%), Positives = 55/73 (75%)
Frame = +1 / -1
Query: 517 GKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSCVPT 696
G S TL SVAR +PLKGV P SS + PKVHQSTALPWPSP MISGARYS VPT
Sbjct: 646 GNLSGCATTLKSVARFPEPLKGVAPCRSS*RKMPKVHQSTALPWPSPRMISGARYSWVPT 467
Query: 697 NDIDRASLGSAMS 735
ND+DRA +GSA++
Sbjct: 466 NDMDRALVGSAVN 428
>gb|CW363767.1|CW363767 fsbb001f035i09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f035i09, DNA
sequence
Length = 650
Score = 155 bits (334), Expect = 5e-037
Identities = 62/92 (67%), Positives = 72/92 (78%)
Frame = -2 / -2
Query: 590 GKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIK 411
G TPFKGS NRATLFNV+ Q LRFP+ PAVS +ARDLIRGLL KEP RLA +RGA E+K
Sbjct: 646 GATPFKGSGNRATLFNVVAQPLRFPDAPAVSAAARDLIRGLLAKEPHNRLASRRGAAEVK 467
Query: 410 QHPFFEGVNWALIRCASPPEVPKPVEIERPSN 315
QHPFFEGVNWAL+R A PP +P ++ S+
Sbjct: 466 QHPFFEGVNWALVRSAQPPYIPDAAAVDHCSS 371
Score = 104 bits (221), Expect = 2e-021
Identities = 52/88 (59%), Positives = 55/88 (62%)
Frame = +1 / +3
Query: 328 SISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTA 507
S + G GG A L SAQ TPSKKGCC S APR ASR GS SRP +RSLA LTA
Sbjct: 384 STAAASGM*GGWALLTSAQLTPSKKGCCFTSAAPRRDASRLCGSLASRPRMRSLAAALTA 563
Query: 508 GYSGKRSCWPMTLNSVARLLDPLKGVFP 591
G SG S TL SVAR +PLKGV P
Sbjct: 564 GASGNLSGCATTLKSVARFPEPLKGVAP 647
>gb|BM330114.1|BM330114 PIC1_47_C12.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 606
Score = 154 bits (330), Expect = 2e-036
Identities = 59/111 (53%), Positives = 77/111 (69%)
Frame = -2 / +3
Query: 668 EIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSA 489
EII G GH SAVDWW G+ LYE+L+G TPF+G + + T N++ + +RFP VS +A
Sbjct: 33 EIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKDIRFPASIQVSLAA 212
Query: 488 RDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPKPV 336
R LI LL ++P RL GA EIKQHPFF G+NWAL+R A+PPE+ P+
Sbjct: 213 RQLIYRLLHRDPANRLGSYEGAIEIKQHPFFRGINWALVRAATPPELEAPL 365
>gb|CW038426.1|CW038426 104_270_10504920_115_30386 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504920, DNA
sequence
Length = 680
Score = 93.6 bits (198), Expect(2) = 7e-036
Identities = 30/53 (56%), Positives = 43/53 (81%)
Frame = -2 / +2
Query: 671 PEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQLRFPE 513
PE++ G GHG+ VDWW FGVFLYEL++G+TPFKG + ATL N++ +Q+ +P+
Sbjct: 2 PELVSGSGHGNGVDWWAFGVFLYELVYGRTPFKGHTKEATLKNILSKQVTYPQ 160
Score = 78.5 bits (165), Expect(2) = 7e-036
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = -2 / +2
Query: 488 RDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVP 345
RDL+ LL ++P++R+ RGA EIK+HPFF GV+WALIRC +PP VP
Sbjct: 191 RDLVGRLLERDPRRRMGATRGAAEIKRHPFFAGVDWALIRCVAPPVVP 334
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 945,409,018
Number of Sequences: 832831
Number of extensions: 15238073
Number of successful extensions: 181382
Number of sequences better than 1.0e-020: 77
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 22574599580
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)