TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2576652.2.4
(870 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AI724233.1|AI724233 RHIZ1_7_H09.y2_A001 Rhizome1 (RHIZ1)... 274 3e-090
gb|BE356061.1|BE356061 DG1_122_B07.b1_A002 Dark Grown 1 (DG... 313 2e-084
gb|BE595210.1|BE595210 PI1_47_C10.b1_A002 Pathogen induced ... 311 8e-084
gb|BM318248.1|BM318248 PI1_80_C05.g9_A002 Pathogen induced ... 211 1e-077
gb|BE356104.1|BE356104 DG1_122_B07.g1_A002 Dark Grown 1 (DG... 287 2e-076
gb|BE594899.1|BE594899 PI1_47_C10.g1_A002 Pathogen induced ... 284 2e-075
gb|BE600096.1|BE600096 PI1_79_C07.b1_A002 Pathogen induced ... 263 3e-069
gb|BE600178.1|BE600178 PI1_80_C05.b1_A002 Pathogen induced ... 237 2e-061
gb|CF486594.1|CF486594 POL1_38_D04.g1_A002 Pollen Sorghum b... 122 1e-055
gb|CN129249.1|CN129249 RHOH1_34_G11.b3_A002 Acid- and alkal... 122 8e-055
gb|BM318165.1|BM318165 PI1_79_C07.g9_A002 Pathogen induced ... 121 2e-051
gb|CN129333.1|CN129333 RHOH1_34_G11.g1_A002 Acid- and alkal... 119 2e-031
gb|CL183302.1|CL183302 104_395_10898081_116_31918_305 Sorgh... 69 5e-029
gb|CW149327.1|CW149327 104_548_11142430_148_36291_091 Sorgh... 69 5e-028
>gb|AI724233.1|AI724233 RHIZ1_7_H09.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 522
Score = 274 bits (593), Expect(3) = 9e-089
Identities = 112/114 (98%), Positives = 114/114 (100%)
Frame = +3 / +2
Query: 63 LFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLLY 242
LFLHMSKDPIRTGEIVVFN+DGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLLY
Sbjct: 8 LFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLLY 187
Query: 243 AHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLLIGALGLLVITSKD* 404
AHGQLWLQQHHIMGRAVGYLPYVGW+TIIMTEKPFIKYLLIGALGLLVITSKD*
Sbjct: 188 AHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD* 349
Score = 268 bits (580), Expect(3) = 3e-090
Identities = 107/115 (93%), Positives = 110/115 (95%)
Frame = -2 / -3
Query: 407 TLIFRRYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI**SV 228
+LIFRRYDQQAQC NQQVLNKWFLSHDNCNPANIWKVAH TSHNVMLLEPKLPMCI**SV
Sbjct: 352 SLIFRRYDQQAQCANQQVLNKWFLSHDNCNPANIWKVAHGTSHNVMLLEPKLPMCI**SV 173
Query: 227 IPKIIVTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQ 63
IPKIIVTFGEDVHFCSVLTFMDLN+ V+NWNFT IDIENNYFS ANRIFAHMQKQ
Sbjct: 172 IPKIIVTFGEDVHFCSVLTFMDLNHTVNNWNFTTIDIENNYFSRANRIFAHMQKQ 8
Score = 261 bits (564), Expect(3) = 2e-084
Identities = 104/114 (91%), Positives = 105/114 (92%)
Frame = +2 / +1
Query: 65 VFAYEQRSYSHRRNSCFQYRWP*NSNCPPRN*GP*TSGHCRSGHPHQR*Q*FWG*PTIIC 244
VFAYEQRSYSH RNSCFQ RW *NSNC P +*GP*TSGHCRSGHPHQR*Q*FWG*PTIIC
Sbjct: 10 VFAYEQRSYSHGRNSCFQCRWS*NSNCSPCD*GP*TSGHCRSGHPHQR*Q*FWG*PTIIC 189
Query: 245 TWAALAPATSHYGTCCGLPSICWLDYNYHD*ETIY*VPADWCTGLAGHNVERLE 406
TWAALAPATSHYGTC GLPSICWL YNYHD*ETIY*VPADW GLAGHNVERLE
Sbjct: 190 TWAALAPATSHYGTCRGLPSICWLGYNYHD*ETIY*VPADWRIGLAGHNVERLE 351
Score = 255 bits (551), Expect(3) = 6e-079
Identities = 108/115 (93%), Positives = 110/115 (95%)
Frame = +1 / +3
Query: 61 SCFCI*AKILFAQEK*LFSISMAVKFQLSTA*LRSMNVRTLQKWTSSPKVTIILGMTDYY 240
SCFCI*AKILFA+EK*LFS+SM VKFQL T *LRSMNVRTLQKWTSSPKVTIILGMTDYY
Sbjct: 6 SCFCI*AKILFAREK*LFSMSMVVKFQLFTV*LRSMNVRTLQKWTSSPKVTIILGMTDYY 185
Query: 241 MHMGSFGSSNITLWDVLWATFHMLAGLQLS*LRNHLLSTC*LVHWACWS*RRKIR 405
MHMGSFGSSNITLWDV WATFHMLAGLQLS*LRNHLLSTC*L HWACWS*RRKIR
Sbjct: 186 MHMGSFGSSNITLWDVPWATFHMLAGLQLS*LRNHLLSTC*LAHWACWS*RRKIR 350
Score = 254 bits (549), Expect(3) = 9e-083
Identities = 110/114 (96%), Positives = 111/114 (97%)
Frame = -3 / -1
Query: 406 L*SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRS 227
L*SFDVMTSKP+APISRYLINGFSVMIIV QPTYGR*PTARPIM*CCWSQSCPCAYNSRS
Sbjct: 351 L*SFDVMTSKPNAPISRYLINGFSVMIIVTQPTYGR*PTARPIM*CCWSQSCPCAYNSRS 172
Query: 226 SPKLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKN 65
SPKLLSPLVRMSTSAVS*RSWTLITR TIGISRPS LKTTISPVRIGSLLICKN
Sbjct: 171 SPKLLSPLVRMSTSAVS*RSWTLITR*TIGISRPSTLKTTISPVRIGSLLICKN 10
Score = 244 bits (528), Expect(3) = 1e-074
Identities = 104/114 (91%), Positives = 107/114 (93%)
Frame = -1 / -2
Query: 405 SNLSTL*PASPVHQSAGT**MVSQS**L*SSQHMEGSPQHVP*CDVAGAKAAHVHIIVGH 226
SNLSTL*PASP+ QSAGT**MVSQS**L* SQHMEGSP+HVP*CDVAGAKAAHVHIIVGH
Sbjct: 350 SNLSTL*PASPMRQSAGT**MVSQS**L*PSQHMEGSPRHVP*CDVAGAKAAHVHIIVGH 171
Query: 225 PQNYCHLW*GCPLLQCPDVHGP*LRGGQLEFHGHRY*KQLFLLCE*DLCSYAKT 64
PQNYCHLW*GCPLLQCPDVHGP* G QLEFH HR+*KQLFL CE*DLCSYAKT
Sbjct: 170 PQNYCHLW*GCPLLQCPDVHGP*SHGEQLEFHDHRH*KQLFLPCE*DLCSYAKT 9
Score = 68.9 bits (144), Expect(3) = 3e-090
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = -2 / -1
Query: 536 LSVYKQIFSFDPWCNRTASLNAAKPITSDVAP*EQNLY 423
L+V K+ FSFD W NRTASLNAAKP+TS VAP*EQNL+
Sbjct: 483 LTVDKEFFSFDTWWNRTASLNAAKPLTSAVAP*EQNLH 370
Score = 64.8 bits (135), Expect(3) = 9e-083
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = -3 / -2
Query: 535 SQSINKYSRLIHGATERLLLTQQSQ*PLMLHHKSKIYTA 419
SQ I SRLIHG TERLLLT +S *PL+LHHKSKIY A
Sbjct: 482 SQ*IKNSSRLIHGGTERLLLTLRSH*PLLLHHKSKIYMA 366
Score = 62.0 bits (129), Expect(3) = 2e-084
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +1 / +2
Query: 427 RFCSYGATSEVIGFAALREAVLLHHGSNENICL*T 531
RFCSYGAT+EV GFAALREAVL HH SNE L T
Sbjct: 374 RFCSYGATAEVSGFAALREAVLFHHVSNEKNSLST 478
Score = 62.0 bits (129), Expect(3) = 9e-089
Identities = 27/36 (75%), Positives = 28/36 (77%)
Frame = +3 / +1
Query: 420 AV*ILLLWCNIRGYWLCCVKRSRSVAPWIKREYLFI 527
A+*ILLLWCN RG WL VKRSRSV P IKRE FI
Sbjct: 367 AM*ILLLWCNSRGQWLRSVKRSRSVPPCIKREEFFI 474
Score = 54.2 bits (112), Expect(3) = 6e-079
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +2 / +3
Query: 425 IDFALMVQHQRLLALLR*EKPFCCTMDQTRIFVYRL 532
+DFALMVQ QR +A R*EKPFC TM QTR +Y L
Sbjct: 372 VDFALMVQQQRSVASQR*EKPFCSTMYQTRRILYLL 479
Score = 50.1 bits (103), Expect(3) = 1e-074
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = -1 / -3
Query: 516 ILV*SMVQQNGFS*RSKANNL*CCTIRAKS 427
+LV* MV+QNGFS*R +A +L CCTIRAKS
Sbjct: 463 LLV*YMVEQNGFS*RCEATDLCCCTIRAKS 374
Score = 35.9 bits (72), Expect(3) = 3e-090
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = -1 / -1
Query: 573 LDENRLSN*WAGALSL 526
LDENRLSN*WAGAL++
Sbjct: 522 LDENRLSN*WAGALTV 475
Score = 31.8 bits (63), Expect(3) = 9e-089
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2 / +2
Query: 530 LRAPAH*LDSRFSS 571
+RAPAH*LDSRFSS
Sbjct: 479 VRAPAH*LDSRFSS 520
Score = 30.9 bits (61), Expect(3) = 2e-084
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / +3
Query: 510 REYLFID*EHLPTN*IVGSHP 572
R L++ * HLPTN IVG HP
Sbjct: 459 RRILYLL*GHLPTNWIVGFHP 521
Score = 29.0 bits (57), Expect(3) = 9e-083
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -2
Query: 572 WMRTDYLISGQVLS 531
WM+TDY ISGQV S
Sbjct: 521 WMKTDYPISGQVPS 480
Score = 26.3 bits (51), Expect(3) = 1e-074
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -3 / -3
Query: 571 G*EPTI*LVGRCSQS 527
G*+PTI LVGRC S
Sbjct: 520 G*KPTIQLVGRCPHS 476
Score = 25.8 bits (50), Expect(3) = 6e-079
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / +1
Query: 532 ESTCPLIR*SVLIQ 573
E TCPLI *SV IQ
Sbjct: 481 EGTCPLIG*SVFIQ 522
>gb|BE356061.1|BE356061 DG1_122_B07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 600
Score = 313 bits (678), Expect = 2e-084
Identities = 128/131 (97%), Positives = 131/131 (100%)
Frame = +3 / +1
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFN+DGREIPIVHRVIKVHERQDT
Sbjct: 208 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDT 387
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGW+TIIMTEKPFIKYLL
Sbjct: 388 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLL 567
Query: 363 IGALGLLVITS 395
IGALGLLVITS
Sbjct: 568 IGALGLLVITS 600
Score = 310 bits (671), Expect = 2e-083
Identities = 121/130 (93%), Positives = 124/130 (95%)
Frame = -2 / -1
Query: 395 RRYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI**SVIPKI 216
RRYDQQAQC NQQVLNKWFLSHDNCNPANIWKVAH TSHNVMLLEPKLPMCI**SV+PKI
Sbjct: 600 RRYDQQAQCANQQVLNKWFLSHDNCNPANIWKVAHGTSHNVMLLEPKLPMCI**SVVPKI 421
Query: 215 IVTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQDITPFKSRF 36
IVTFGEDVHFCSVLTFMDLN+ V+NWNFT IDIENNYFS ANRIFAHMQKQDITPFKSR
Sbjct: 420 IVTFGEDVHFCSVLTFMDLNHTVNNWNFTTIDIENNYFSRANRIFAHMQKQDITPFKSRL 241
Query: 35 HATRENHYNW 6
HATRENHYNW
Sbjct: 240 HATRENHYNW 211
Score = 297 bits (644), Expect = 1e-079
Identities = 118/130 (90%), Positives = 119/130 (91%)
Frame = +2 / +3
Query: 5 TSCSGSLW*HGTWI*KG*YPVFAYEQRSYSHRRNSCFQYRWP*NSNCPPRN*GP*TSGHC 184
TSCSGSLW*HG WI*KG*YPVFAYEQRSYSH RNSCFQ RW *NSNC P +*GP*TSGHC
Sbjct: 210 TSCSGSLW*HGAWI*KG*YPVFAYEQRSYSHGRNSCFQCRWS*NSNCSPCD*GP*TSGHC 389
Query: 185 RSGHPHQR*Q*FWG*PTIICTWAALAPATSHYGTCCGLPSICWLDYNYHD*ETIY*VPAD 364
RSGHPHQR*Q*FWG PTIICTWAALAPATSHYGTC GLPSICWL YNYHD*ETIY*VPAD
Sbjct: 390 RSGHPHQR*Q*FWGRPTIICTWAALAPATSHYGTCRGLPSICWLGYNYHD*ETIY*VPAD 569
Query: 365 WCTGLAGHNV 394
W GLAGHNV
Sbjct: 570 WRIGLAGHNV 599
Score = 294 bits (637), Expect = 1e-078
Identities = 126/130 (96%), Positives = 127/130 (97%)
Frame = -3 / -2
Query: 394 DVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSPKL 215
DVMTSKP+APISRYLINGFSVMIIV QPTYGR*PTARPIM*CCWSQSCPCAYNSRSSPKL
Sbjct: 599 DVMTSKPNAPISRYLINGFSVMIIVTQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSPKL 420
Query: 214 LSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISPLLNPGS 35
LSPLVRMSTSAVS*RSWTLITR TIGISRPS LKTTISPVRIGSLLICKNRISPLLNPGS
Sbjct: 419 LSPLVRMSTSAVS*RSWTLITR*TIGISRPSTLKTTISPVRIGSLLICKNRISPLLNPGS 240
Query: 34 MLPERTTTTG 5
MLPERTTTTG
Sbjct: 239 MLPERTTTTG 210
Score = 287 bits (622), Expect = 1e-076
Identities = 121/130 (93%), Positives = 124/130 (95%)
Frame = +1 / +2
Query: 4 HQL*WFSLVAWNLDLKGVISCFCI*AKILFAQEK*LFSISMAVKFQLSTA*LRSMNVRTL 183
HQL*WFSLVAW+LDLKGVISCFCI*AKILFA+EK*LFS+SM VKFQL T *LRSMNVRTL
Sbjct: 209 HQL*WFSLVAWSLDLKGVISCFCI*AKILFAREK*LFSMSMVVKFQLFTV*LRSMNVRTL 388
Query: 184 QKWTSSPKVTIILGMTDYYMHMGSFGSSNITLWDVLWATFHMLAGLQLS*LRNHLLSTC* 363
QKWTSSPKVTIILG TDYYMHMGSFGSSNITLWDV WATFHMLAGLQLS*LRNHLLSTC*
Sbjct: 389 QKWTSSPKVTIILGTTDYYMHMGSFGSSNITLWDVPWATFHMLAGLQLS*LRNHLLSTC* 568
Query: 364 LVHWACWS*R 393
L HWACWS*R
Sbjct: 569 LAHWACWS*R 598
Score = 281 bits (608), Expect = 1e-074
Identities = 118/130 (90%), Positives = 121/130 (93%)
Frame = -1 / -3
Query: 393 TL*PASPVHQSAGT**MVSQS**L*SSQHMEGSPQHVP*CDVAGAKAAHVHIIVGHPQNY 214
TL*PASP+ QSAGT**MVSQS**L* SQHMEGSP+HVP*CDVAGAKAAHVHIIVG PQNY
Sbjct: 598 TL*PASPMRQSAGT**MVSQS**L*PSQHMEGSPRHVP*CDVAGAKAAHVHIIVGRPQNY 419
Query: 213 CHLW*GCPLLQCPDVHGP*LRGGQLEFHGHRY*KQLFLLCE*DLCSYAKTGYHPF*IQVP 34
CHLW*GCPLLQCPDVHGP* G QLEFH HR+*KQLFL CE*DLCSYAKTGYHPF*IQ P
Sbjct: 418 CHLW*GCPLLQCPDVHGP*SHGEQLEFHDHRH*KQLFLPCE*DLCSYAKTGYHPF*IQAP 239
Query: 33 CYQREPLQLV 4
CYQREPLQLV
Sbjct: 238 CYQREPLQLV 209
>gb|BE595210.1|BE595210 PI1_47_C10.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 580
Score = 311 bits (674), Expect = 8e-084
Identities = 127/130 (97%), Positives = 130/130 (100%)
Frame = +3 / +1
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFN+DGREIPIVHRVIKVHERQDT
Sbjct: 190 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDT 369
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGW+TIIMTEKPFIKYLL
Sbjct: 370 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLL 549
Query: 363 IGALGLLVIT 392
IGALGLLVIT
Sbjct: 550 IGALGLLVIT 579
Score = 308 bits (666), Expect = 1e-082
Identities = 120/129 (93%), Positives = 123/129 (95%)
Frame = -2 / -2
Query: 392 RYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI**SVIPKII 213
RYDQQAQC NQQVLNKWFLSHDNCNPANIWKVAH TSHNVMLLEPKLPMCI**SV+PKII
Sbjct: 579 RYDQQAQCANQQVLNKWFLSHDNCNPANIWKVAHGTSHNVMLLEPKLPMCI**SVVPKII 400
Query: 212 VTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQDITPFKSRFH 33
VTFGEDVHFCSVLTFMDLN+ V+NWNFT IDIENNYFS ANRIFAHMQKQDITPFKSR H
Sbjct: 399 VTFGEDVHFCSVLTFMDLNHTVNNWNFTTIDIENNYFSRANRIFAHMQKQDITPFKSRLH 220
Query: 32 ATRENHYNW 6
ATRENHYNW
Sbjct: 219 ATRENHYNW 193
Score = 296 bits (640), Expect = 4e-079
Identities = 117/129 (90%), Positives = 118/129 (91%)
Frame = +2 / +3
Query: 5 TSCSGSLW*HGTWI*KG*YPVFAYEQRSYSHRRNSCFQYRWP*NSNCPPRN*GP*TSGHC 184
TSCSGSLW*HG WI*KG*YPVFAYEQRSYSH RNSCFQ RW *NSNC P +*GP*TSGHC
Sbjct: 192 TSCSGSLW*HGAWI*KG*YPVFAYEQRSYSHGRNSCFQCRWS*NSNCSPCD*GP*TSGHC 371
Query: 185 RSGHPHQR*Q*FWG*PTIICTWAALAPATSHYGTCCGLPSICWLDYNYHD*ETIY*VPAD 364
RSGHPHQR*Q*FWG PTIICTWAALAPATSHYGTC GLPSICWL YNYHD*ETIY*VPAD
Sbjct: 372 RSGHPHQR*Q*FWGRPTIICTWAALAPATSHYGTCRGLPSICWLGYNYHD*ETIY*VPAD 551
Query: 365 WCTGLAGHN 391
W GLAGHN
Sbjct: 552 WRIGLAGHN 578
Score = 292 bits (631), Expect = 7e-078
Identities = 125/129 (96%), Positives = 126/129 (97%)
Frame = -3 / -3
Query: 391 VMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSPKLL 212
VMTSKP+APISRYLINGFSVMIIV QPTYGR*PTARPIM*CCWSQSCPCAYNSRSSPKLL
Sbjct: 578 VMTSKPNAPISRYLINGFSVMIIVTQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSPKLL 399
Query: 211 SPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISPLLNPGSM 32
SPLVRMSTSAVS*RSWTLITR TIGISRPS LKTTISPVRIGSLLICKNRISPLLNPGSM
Sbjct: 398 SPLVRMSTSAVS*RSWTLITR*TIGISRPSTLKTTISPVRIGSLLICKNRISPLLNPGSM 219
Query: 31 LPERTTTTG 5
LPERTTTTG
Sbjct: 218 LPERTTTTG 192
Score = 287 bits (622), Expect = 1e-076
Identities = 121/130 (93%), Positives = 124/130 (95%)
Frame = +1 / +2
Query: 4 HQL*WFSLVAWNLDLKGVISCFCI*AKILFAQEK*LFSISMAVKFQLSTA*LRSMNVRTL 183
HQL*WFSLVAW+LDLKGVISCFCI*AKILFA+EK*LFS+SM VKFQL T *LRSMNVRTL
Sbjct: 191 HQL*WFSLVAWSLDLKGVISCFCI*AKILFAREK*LFSMSMVVKFQLFTV*LRSMNVRTL 370
Query: 184 QKWTSSPKVTIILGMTDYYMHMGSFGSSNITLWDVLWATFHMLAGLQLS*LRNHLLSTC* 363
QKWTSSPKVTIILG TDYYMHMGSFGSSNITLWDV WATFHMLAGLQLS*LRNHLLSTC*
Sbjct: 371 QKWTSSPKVTIILGTTDYYMHMGSFGSSNITLWDVPWATFHMLAGLQLS*LRNHLLSTC* 550
Query: 364 LVHWACWS*R 393
L HWACWS*R
Sbjct: 551 LAHWACWS*R 580
Score = 281 bits (608), Expect = 1e-074
Identities = 118/130 (90%), Positives = 121/130 (93%)
Frame = -1 / -1
Query: 393 TL*PASPVHQSAGT**MVSQS**L*SSQHMEGSPQHVP*CDVAGAKAAHVHIIVGHPQNY 214
TL*PASP+ QSAGT**MVSQS**L* SQHMEGSP+HVP*CDVAGAKAAHVHIIVG PQNY
Sbjct: 580 TL*PASPMRQSAGT**MVSQS**L*PSQHMEGSPRHVP*CDVAGAKAAHVHIIVGRPQNY 401
Query: 213 CHLW*GCPLLQCPDVHGP*LRGGQLEFHGHRY*KQLFLLCE*DLCSYAKTGYHPF*IQVP 34
CHLW*GCPLLQCPDVHGP* G QLEFH HR+*KQLFL CE*DLCSYAKTGYHPF*IQ P
Sbjct: 400 CHLW*GCPLLQCPDVHGP*SHGEQLEFHDHRH*KQLFLPCE*DLCSYAKTGYHPF*IQAP 221
Query: 33 CYQREPLQLV 4
CYQREPLQLV
Sbjct: 220 CYQREPLQLV 191
>gb|BM318248.1|BM318248 PI1_80_C05.g9_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 625
Score = 211 bits (455), Expect(4) = 1e-077
Identities = 86/87 (98%), Positives = 87/87 (100%)
Frame = +3 / +1
Query: 144 VHRVIKVHERQDTAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWIT 323
VHRVIKVHERQDTAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGW+T
Sbjct: 1 VHRVIKVHERQDTAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVT 180
Query: 324 IIMTEKPFIKYLLIGALGLLVITSKD* 404
IIMTEKPFIKYLLIGALGLLVITSKD*
Sbjct: 181 IIMTEKPFIKYLLIGALGLLVITSKD* 261
Score = 205 bits (443), Expect(3) = 2e-076
Identities = 81/88 (92%), Positives = 85/88 (96%)
Frame = -2 / -2
Query: 407 TLIFRRYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI**SV 228
+LIFRRYDQQAQC NQQVLNKWFLSHDNCNPANIWKVAH TSHNVMLLEPKLPMCI**SV
Sbjct: 264 SLIFRRYDQQAQCANQQVLNKWFLSHDNCNPANIWKVAHGTSHNVMLLEPKLPMCI**SV 85
Query: 227 IPKIIVTFGEDVHFCSVLTFMDLNYAVD 144
+PKIIVTFGEDVHFCSVLTFMDLN+ V+
Sbjct: 84 VPKIIVTFGEDVHFCSVLTFMDLNHTVN 1
Score = 199 bits (429), Expect(3) = 1e-071
Identities = 79/86 (91%), Positives = 80/86 (93%)
Frame = +2 / +3
Query: 149 PRN*GP*TSGHCRSGHPHQR*Q*FWG*PTIICTWAALAPATSHYGTCCGLPSICWLDYNY 328
P +*GP*TSGHCRSGHPHQR*Q*FWG PTIICTWAALAPATSHYGTC GLPSICWL YNY
Sbjct: 6 PCD*GP*TSGHCRSGHPHQR*Q*FWGRPTIICTWAALAPATSHYGTCRGLPSICWLGYNY 185
Query: 329 HD*ETIY*VPADWCTGLAGHNVERLE 406
HD*ETIY*VPADW GLAGHNVERLE
Sbjct: 186 HD*ETIY*VPADWRIGLAGHNVERLE 263
Score = 198 bits (427), Expect(3) = 9e-067
Identities = 82/86 (95%), Positives = 82/86 (95%)
Frame = +1 / +2
Query: 148 TA*LRSMNVRTLQKWTSSPKVTIILGMTDYYMHMGSFGSSNITLWDVLWATFHMLAGLQL 327
T *LRSMNVRTLQKWTSSPKVTIILG TDYYMHMGSFGSSNITLWDV WATFHMLAGLQL
Sbjct: 5 TV*LRSMNVRTLQKWTSSPKVTIILGTTDYYMHMGSFGSSNITLWDVPWATFHMLAGLQL 184
Query: 328 S*LRNHLLSTC*LVHWACWS*RRKIR 405
S*LRNHLLSTC*L HWACWS*RRKIR
Sbjct: 185 S*LRNHLLSTC*LAHWACWS*RRKIR 262
Score = 198 bits (426), Expect(3) = 2e-072
Identities = 84/86 (97%), Positives = 85/86 (98%)
Frame = -3 / -3
Query: 406 L*SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRS 227
L*SFDVMTSKP+APISRYLINGFSVMIIV QPTYGR*PTARPIM*CCWSQSCPCAYNSRS
Sbjct: 263 L*SFDVMTSKPNAPISRYLINGFSVMIIVTQPTYGR*PTARPIM*CCWSQSCPCAYNSRS 84
Query: 226 SPKLLSPLVRMSTSAVS*RSWTLITR 149
SPKLLSPLVRMSTSAVS*RSWTLITR
Sbjct: 83 SPKLLSPLVRMSTSAVS*RSWTLITR 6
Score = 185 bits (399), Expect(3) = 2e-063
Identities = 79/86 (91%), Positives = 81/86 (94%)
Frame = -1 / -1
Query: 405 SNLSTL*PASPVHQSAGT**MVSQS**L*SSQHMEGSPQHVP*CDVAGAKAAHVHIIVGH 226
SNLSTL*PASP+ QSAGT**MVSQS**L* SQHMEGSP+HVP*CDVAGAKAAHVHIIVG
Sbjct: 262 SNLSTL*PASPMRQSAGT**MVSQS**L*PSQHMEGSPRHVP*CDVAGAKAAHVHIIVGR 83
Query: 225 PQNYCHLW*GCPLLQCPDVHGP*LRG 148
PQNYCHLW*GCPLLQCPDVHGP* G
Sbjct: 82 PQNYCHLW*GCPLLQCPDVHGP*SHG 5
Score = 68.9 bits (144), Expect(3) = 2e-076
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = -2 / -3
Query: 536 LSVYKQIFSFDPWCNRTASLNAAKPITSDVAP*EQNLY 423
L+V K+ FSFD W NRTASLNAAKP+TS VAP*EQNL+
Sbjct: 395 LTVDKEFFSFDTWWNRTASLNAAKPLTSAVAP*EQNLH 282
Score = 64.8 bits (135), Expect(3) = 2e-072
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = -3 / -1
Query: 535 SQSINKYSRLIHGATERLLLTQQSQ*PLMLHHKSKIYTA 419
SQ I SRLIHG TERLLLT +S *PL+LHHKSKIY A
Sbjct: 394 SQ*IKNSSRLIHGGTERLLLTLRSH*PLLLHHKSKIYMA 278
Score = 62.0 bits (129), Expect(3) = 1e-071
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +1 / +1
Query: 427 RFCSYGATSEVIGFAALREAVLLHHGSNENICL*T 531
RFCSYGAT+EV GFAALREAVL HH SNE L T
Sbjct: 286 RFCSYGATAEVSGFAALREAVLFHHVSNEKNSLST 390
Score = 62.0 bits (129), Expect(4) = 1e-077
Identities = 27/36 (75%), Positives = 28/36 (77%)
Frame = +3 / +3
Query: 420 AV*ILLLWCNIRGYWLCCVKRSRSVAPWIKREYLFI 527
A+*ILLLWCN RG WL VKRSRSV P IKRE FI
Sbjct: 279 AM*ILLLWCNSRGQWLRSVKRSRSVPPCIKREEFFI 386
Score = 54.2 bits (112), Expect(3) = 9e-067
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +2 / +2
Query: 425 IDFALMVQHQRLLALLR*EKPFCCTMDQTRIFVYRL 532
+DFALMVQ QR +A R*EKPFC TM QTR +Y L
Sbjct: 284 VDFALMVQQQRSVASQR*EKPFCSTMYQTRRILYLL 391
Score = 52.4 bits (108), Expect(3) = 2e-076
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -1 / -3
Query: 627 NNELVQLIS*AKNTKRWMLDENRLSN*WAGALSL 526
+ L+QLIS TKR MLDENRLSN*WAGAL++
Sbjct: 488 HRRLIQLISYGTTTKR*MLDENRLSN*WAGALTV 387
Score = 50.6 bits (104), Expect(4) = 1e-077
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +2 / +1
Query: 530 LRAPAH*LDSRFSSSIHLLVFLA*LMS*TS 619
+RAPAH*LDSRFSSSIHL V + *LMS* S
Sbjct: 391 VRAPAH*LDSRFSSSIHLFVVVP*LMS*IS 480
Score = 50.6 bits (104), Expect(3) = 2e-072
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = -2 / -1
Query: 638 SSNRTTNWFNSLARLKIPKDGCWMRTDYLISGQVLS 531
S+ T + FNSLA ++ KD CWMRTDY ISGQV S
Sbjct: 499 SNITTDD*FNSLAMAQLQKDECWMRTDYPISGQVPS 392
Score = 50.1 bits (103), Expect(3) = 2e-063
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = -1 / -2
Query: 516 ILV*SMVQQNGFS*RSKANNL*CCTIRAKS 427
+LV* MV+QNGFS*R +A +L CCTIRAKS
Sbjct: 375 LLV*YMVEQNGFS*RCEATDLCCCTIRAKS 286
Score = 49.2 bits (101), Expect(3) = 1e-071
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +1 / +3
Query: 532 ESTCPLIR*SVLIQHPSFGIFSLANELNQFVVLFDD 639
E TCPLI *SVLIQH SF ++ANELNQ V+ D
Sbjct: 393 EGTCPLIG*SVLIQHSSFCSCAIANELNQSSVVIFD 500
Score = 47.8 bits (98), Expect(3) = 2e-063
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = -3 / -2
Query: 619 TGSTH*LG*KYQKMDAG*EPTI*LVGRCSQS 527
T STH*L Y+KM+AG*EPTI LVGRC S
Sbjct: 480 TDSTH*LWHNYKKMNAG*EPTIQLVGRCPHS 388
Score = 41.8 bits (85), Expect(3) = 9e-067
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +3 / +2
Query: 510 REYLFID*EHLPTN*IVGSHPASIFWYF*PS**VEPV 620
R L++ * HLPTN IVGSHPA IF S**VE V
Sbjct: 371 RRILYLL*GHLPTNWIVGSHPAFIFL*LCHS**VESV 481
Score = 25.4 bits (49), Expect(4) = 1e-077
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2 / +1
Query: 623 LFYLMITIHCSFPGN 667
L+ + IT+HCS GN
Sbjct: 490 LYSMKITLHCSLAGN 534
>gb|BE356104.1|BE356104 DG1_122_B07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 460
Score = 287 bits (621), Expect = 2e-076
Identities = 115/118 (97%), Positives = 118/118 (100%)
Frame = +3 / +2
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFN+DGREIPIVHRVIKVHERQDT
Sbjct: 107 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDT 286
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKY 356
AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGW+TIIMTEKPFIKY
Sbjct: 287 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKY 460
Score = 279 bits (604), Expect = 4e-074
Identities = 109/117 (93%), Positives = 112/117 (95%)
Frame = -2 / -1
Query: 356 VLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI**SVIPKIIVTFGEDVHFCSV 177
VLNKWFLSHDNCNPANIWKVAH TSHNVMLLEPKLPMCI**SV+PKIIVTFGEDVHFCSV
Sbjct: 460 VLNKWFLSHDNCNPANIWKVAHGTSHNVMLLEPKLPMCI**SVVPKIIVTFGEDVHFCSV 281
Query: 176 LTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQDITPFKSRFHATRENHYNW 6
LTFMDLN+ V+NWNFT IDIENNYFS ANRIFAHMQKQDITPFKSR HATRENHYNW
Sbjct: 280 LTFMDLNHTVNNWNFTTIDIENNYFSRANRIFAHMQKQDITPFKSRLHATRENHYNW 110
Score = 269 bits (582), Expect = 4e-071
Identities = 107/117 (91%), Positives = 108/117 (92%)
Frame = +2 / +1
Query: 5 TSCSGSLW*HGTWI*KG*YPVFAYEQRSYSHRRNSCFQYRWP*NSNCPPRN*GP*TSGHC 184
TSCSGSLW*HG WI*KG*YPVFAYEQRSYSH RNSCFQ RW *NSNC P +*GP*TSGHC
Sbjct: 109 TSCSGSLW*HGAWI*KG*YPVFAYEQRSYSHGRNSCFQCRWS*NSNCSPCD*GP*TSGHC 288
Query: 185 RSGHPHQR*Q*FWG*PTIICTWAALAPATSHYGTCCGLPSICWLDYNYHD*ETIY*V 355
RSGHPHQR*Q*FWG PTIICTWAALAPATSHYGTC GLPSICWL YNYHD*ETIY*V
Sbjct: 289 RSGHPHQR*Q*FWGRPTIICTWAALAPATSHYGTCRGLPSICWLGYNYHD*ETIY*V 459
Score = 266 bits (576), Expect = 3e-070
Identities = 114/117 (97%), Positives = 114/117 (97%)
Frame = -3 / -2
Query: 355 YLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSPKLLSPLVRMSTSAVS 176
YLINGFSVMIIV QPTYGR*PTARPIM*CCWSQSCPCAYNSRSSPKLLSPLVRMSTSAVS
Sbjct: 459 YLINGFSVMIIVTQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSPKLLSPLVRMSTSAVS 280
Query: 175 *RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISPLLNPGSMLPERTTTTG 5
*RSWTLITR TIGISRPS LKTTISPVRIGSLLICKNRISPLLNPGSMLPERTTTTG
Sbjct: 279 *RSWTLITR*TIGISRPSTLKTTISPVRIGSLLICKNRISPLLNPGSMLPERTTTTG 109
Score = 257 bits (556), Expect = 2e-067
Identities = 107/117 (91%), Positives = 109/117 (93%)
Frame = -1 / -3
Query: 354 T**MVSQS**L*SSQHMEGSPQHVP*CDVAGAKAAHVHIIVGHPQNYCHLW*GCPLLQCP 175
T**MVSQS**L* SQHMEGSP+HVP*CDVAGAKAAHVHIIVG PQNYCHLW*GCPLLQCP
Sbjct: 458 T**MVSQS**L*PSQHMEGSPRHVP*CDVAGAKAAHVHIIVGRPQNYCHLW*GCPLLQCP 279
Query: 174 DVHGP*LRGGQLEFHGHRY*KQLFLLCE*DLCSYAKTGYHPF*IQVPCYQREPLQLV 4
DVHGP* G QLEFH HR+*KQLFL CE*DLCSYAKTGYHPF*IQ PCYQREPLQLV
Sbjct: 278 DVHGP*SHGEQLEFHDHRH*KQLFLPCE*DLCSYAKTGYHPF*IQAPCYQREPLQLV 108
Score = 254 bits (550), Expect = 1e-066
Identities = 109/117 (93%), Positives = 112/117 (95%)
Frame = +1 / +3
Query: 4 HQL*WFSLVAWNLDLKGVISCFCI*AKILFAQEK*LFSISMAVKFQLSTA*LRSMNVRTL 183
HQL*WFSLVAW+LDLKGVISCFCI*AKILFA+EK*LFS+SM VKFQL T *LRSMNVRTL
Sbjct: 108 HQL*WFSLVAWSLDLKGVISCFCI*AKILFAREK*LFSMSMVVKFQLFTV*LRSMNVRTL 287
Query: 184 QKWTSSPKVTIILGMTDYYMHMGSFGSSNITLWDVLWATFHMLAGLQLS*LRNHLLS 354
QKWTSSPKVTIILG TDYYMHMGSFGSSNITLWDV WATFHMLAGLQLS*LRNHLLS
Sbjct: 288 QKWTSSPKVTIILGTTDYYMHMGSFGSSNITLWDVPWATFHMLAGLQLS*LRNHLLS 458
>gb|BE594899.1|BE594899 PI1_47_C10.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 476
Score = 284 bits (614), Expect = 2e-075
Identities = 114/117 (97%), Positives = 117/117 (100%)
Frame = +3 / +2
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFN+DGREIPIVHRVIKVHERQDT
Sbjct: 125 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDT 304
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIK 353
AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGW+TIIMTEKPFIK
Sbjct: 305 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIK 475
Score = 277 bits (600), Expect = 1e-073
Identities = 108/116 (93%), Positives = 111/116 (95%)
Frame = -2 / -2
Query: 353 LNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI**SVIPKIIVTFGEDVHFCSVL 174
LNKWFLSHDNCNPANIWKVAH TSHNVMLLEPKLPMCI**SV+PKIIVTFGEDVHFCSVL
Sbjct: 475 LNKWFLSHDNCNPANIWKVAHGTSHNVMLLEPKLPMCI**SVVPKIIVTFGEDVHFCSVL 296
Query: 173 TFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQDITPFKSRFHATRENHYNW 6
TFMDLN+ V+NWNFT IDIENNYFS ANRIFAHMQKQDITPFKSR HATRENHYNW
Sbjct: 295 TFMDLNHTVNNWNFTTIDIENNYFSRANRIFAHMQKQDITPFKSRLHATRENHYNW 128
Score = 267 bits (578), Expect = 1e-070
Identities = 106/116 (91%), Positives = 107/116 (92%)
Frame = +2 / +1
Query: 5 TSCSGSLW*HGTWI*KG*YPVFAYEQRSYSHRRNSCFQYRWP*NSNCPPRN*GP*TSGHC 184
TSCSGSLW*HG WI*KG*YPVFAYEQRSYSH RNSCFQ RW *NSNC P +*GP*TSGHC
Sbjct: 127 TSCSGSLW*HGAWI*KG*YPVFAYEQRSYSHGRNSCFQCRWS*NSNCSPCD*GP*TSGHC 306
Query: 185 RSGHPHQR*Q*FWG*PTIICTWAALAPATSHYGTCCGLPSICWLDYNYHD*ETIY* 352
RSGHPHQR*Q*FWG PTIICTWAALAPATSHYGTC GLPSICWL YNYHD*ETIY*
Sbjct: 307 RSGHPHQR*Q*FWGRPTIICTWAALAPATSHYGTCRGLPSICWLGYNYHD*ETIY* 474
Score = 263 bits (569), Expect = 2e-069
Identities = 113/116 (97%), Positives = 113/116 (97%)
Frame = -3 / -3
Query: 352 LINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSPKLLSPLVRMSTSAVS* 173
LINGFSVMIIV QPTYGR*PTARPIM*CCWSQSCPCAYNSRSSPKLLSPLVRMSTSAVS*
Sbjct: 474 LINGFSVMIIVTQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSPKLLSPLVRMSTSAVS* 295
Query: 172 RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISPLLNPGSMLPERTTTTG 5
RSWTLITR TIGISRPS LKTTISPVRIGSLLICKNRISPLLNPGSMLPERTTTTG
Sbjct: 294 RSWTLITR*TIGISRPSTLKTTISPVRIGSLLICKNRISPLLNPGSMLPERTTTTG 127
Score = 257 bits (556), Expect = 2e-067
Identities = 107/117 (91%), Positives = 109/117 (93%)
Frame = -1 / -1
Query: 354 T**MVSQS**L*SSQHMEGSPQHVP*CDVAGAKAAHVHIIVGHPQNYCHLW*GCPLLQCP 175
T**MVSQS**L* SQHMEGSP+HVP*CDVAGAKAAHVHIIVG PQNYCHLW*GCPLLQCP
Sbjct: 476 T**MVSQS**L*PSQHMEGSPRHVP*CDVAGAKAAHVHIIVGRPQNYCHLW*GCPLLQCP 297
Query: 174 DVHGP*LRGGQLEFHGHRY*KQLFLLCE*DLCSYAKTGYHPF*IQVPCYQREPLQLV 4
DVHGP* G QLEFH HR+*KQLFL CE*DLCSYAKTGYHPF*IQ PCYQREPLQLV
Sbjct: 296 DVHGP*SHGEQLEFHDHRH*KQLFLPCE*DLCSYAKTGYHPF*IQAPCYQREPLQLV 126
Score = 254 bits (550), Expect = 1e-066
Identities = 109/117 (93%), Positives = 112/117 (95%)
Frame = +1 / +3
Query: 4 HQL*WFSLVAWNLDLKGVISCFCI*AKILFAQEK*LFSISMAVKFQLSTA*LRSMNVRTL 183
HQL*WFSLVAW+LDLKGVISCFCI*AKILFA+EK*LFS+SM VKFQL T *LRSMNVRTL
Sbjct: 126 HQL*WFSLVAWSLDLKGVISCFCI*AKILFAREK*LFSMSMVVKFQLFTV*LRSMNVRTL 305
Query: 184 QKWTSSPKVTIILGMTDYYMHMGSFGSSNITLWDVLWATFHMLAGLQLS*LRNHLLS 354
QKWTSSPKVTIILG TDYYMHMGSFGSSNITLWDV WATFHMLAGLQLS*LRNHLLS
Sbjct: 306 QKWTSSPKVTIILGTTDYYMHMGSFGSSNITLWDVPWATFHMLAGLQLS*LRNHLLS 476
>gb|BE600096.1|BE600096 PI1_79_C07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 537
Score = 263 bits (568), Expect = 3e-069
Identities = 105/108 (97%), Positives = 108/108 (100%)
Frame = +3 / +1
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFN+DGREIPIVHRVIKVHERQDT
Sbjct: 214 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDT 393
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITI 326
AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGW+TI
Sbjct: 394 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTI 537
Score = 247 bits (534), Expect = 2e-064
Identities = 98/107 (91%), Positives = 101/107 (94%)
Frame = -2 / -1
Query: 326 NCNPANIWKVAHSTSHNVMLLEPKLPMCI**SVIPKIIVTFGEDVHFCSVLTFMDLNYAV 147
N NPANIWKVAH TSHNVMLLEPKLPMCI**SV+PKIIVTFGEDVHFCSVLTFMDLN+ V
Sbjct: 537 NGNPANIWKVAHGTSHNVMLLEPKLPMCI**SVVPKIIVTFGEDVHFCSVLTFMDLNHTV 358
Query: 146 DNWNFTAIDIENNYFSCANRIFAHMQKQDITPFKSRFHATRENHYNW 6
+NWNFT IDIENNYFS ANRIFAHMQKQDITPFKSR HATRENHYNW
Sbjct: 357 NNWNFTTIDIENNYFSRANRIFAHMQKQDITPFKSRLHATRENHYNW 217
Score = 245 bits (529), Expect = 8e-064
Identities = 96/107 (89%), Positives = 98/107 (91%)
Frame = +2 / +3
Query: 5 TSCSGSLW*HGTWI*KG*YPVFAYEQRSYSHRRNSCFQYRWP*NSNCPPRN*GP*TSGHC 184
TSCSGSLW*HG WI*KG*YPVFAYEQRSYSH RNSCFQ RW *NSNC P +*GP*TSGHC
Sbjct: 216 TSCSGSLW*HGAWI*KG*YPVFAYEQRSYSHGRNSCFQCRWS*NSNCSPCD*GP*TSGHC 395
Query: 185 RSGHPHQR*Q*FWG*PTIICTWAALAPATSHYGTCCGLPSICWLDYN 325
RSGHPHQR*Q*FWG PTIICTWAALAPATSHYGTC GLPSICWL Y+
Sbjct: 396 RSGHPHQR*Q*FWGRPTIICTWAALAPATSHYGTCRGLPSICWLGYH 536
Score = 242 bits (523), Expect = 5e-063
Identities = 103/107 (96%), Positives = 104/107 (97%)
Frame = -3 / -2
Query: 325 IVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSPKLLSPLVRMSTSAVS*RSWTLITRW 146
+V QPTYGR*PTARPIM*CCWSQSCPCAYNSRSSPKLLSPLVRMSTSAVS*RSWTLITR
Sbjct: 536 MVTQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSPKLLSPLVRMSTSAVS*RSWTLITR* 357
Query: 145 TIGISRPSILKTTISPVRIGSLLICKNRISPLLNPGSMLPERTTTTG 5
TIGISRPS LKTTISPVRIGSLLICKNRISPLLNPGSMLPERTTTTG
Sbjct: 356 TIGISRPSTLKTTISPVRIGSLLICKNRISPLLNPGSMLPERTTTTG 216
Score = 241 bits (521), Expect = 1e-062
Identities = 95/104 (91%), Positives = 97/104 (93%)
Frame = -1 / -3
Query: 315 SQHMEGSPQHVP*CDVAGAKAAHVHIIVGHPQNYCHLW*GCPLLQCPDVHGP*LRGGQLE 136
SQHMEGSP+HVP*CDVAGAKAAHVHIIVG PQNYCHLW*GCPLLQCPDVHGP* G QLE
Sbjct: 526 SQHMEGSPRHVP*CDVAGAKAAHVHIIVGRPQNYCHLW*GCPLLQCPDVHGP*SHGEQLE 347
Query: 135 FHGHRY*KQLFLLCE*DLCSYAKTGYHPF*IQVPCYQREPLQLV 4
FH HR+*KQLFL CE*DLCSYAKTGYHPF*IQ PCYQREPLQLV
Sbjct: 346 FHDHRH*KQLFLPCE*DLCSYAKTGYHPF*IQAPCYQREPLQLV 215
Score = 232 bits (501), Expect = 6e-060
Identities = 98/106 (92%), Positives = 101/106 (95%)
Frame = +1 / +2
Query: 4 HQL*WFSLVAWNLDLKGVISCFCI*AKILFAQEK*LFSISMAVKFQLSTA*LRSMNVRTL 183
HQL*WFSLVAW+LDLKGVISCFCI*AKILFA+EK*LFS+SM VKFQL T *LRSMNVRTL
Sbjct: 215 HQL*WFSLVAWSLDLKGVISCFCI*AKILFAREK*LFSMSMVVKFQLFTV*LRSMNVRTL 394
Query: 184 QKWTSSPKVTIILGMTDYYMHMGSFGSSNITLWDVLWATFHMLAGL 321
QKWTSSPKVTIILG TDYYMHMGSFGSSNITLWDV WATFHMLAGL
Sbjct: 395 QKWTSSPKVTIILGTTDYYMHMGSFGSSNITLWDVPWATFHMLAGL 532
>gb|BE600178.1|BE600178 PI1_80_C05.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 514
Score = 237 bits (511), Expect = 2e-061
Identities = 96/100 (96%), Positives = 99/100 (99%)
Frame = +3 / +1
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFN+DGREIPIVHRVIKVHERQDT
Sbjct: 214 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDT 393
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYL 302
A+VDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRA GYL
Sbjct: 394 AQVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAGGYL 513
Score = 228 bits (493), Expect = 7e-059
Identities = 89/100 (89%), Positives = 93/100 (93%)
Frame = -1 / -1
Query: 303 EGSPQHVP*CDVAGAKAAHVHIIVGHPQNYCHLW*GCPLLQCPDVHGP*LRGGQLEFHGH 124
EGSP+HVP*CDVAGA+AAHVHIIVG PQNYCHLW*GCPL+QCPDVHGP* G QLEFH H
Sbjct: 514 EGSPRHVP*CDVAGARAAHVHIIVGRPQNYCHLW*GCPLVQCPDVHGP*SHGEQLEFHDH 335
Query: 123 RY*KQLFLLCE*DLCSYAKTGYHPF*IQVPCYQREPLQLV 4
R+*KQLFL CE*DLCSYAKTGYHPF*IQ PCYQREPLQLV
Sbjct: 334 RH*KQLFLPCE*DLCSYAKTGYHPF*IQAPCYQREPLQLV 215
Score = 224 bits (484), Expect = 1e-057
Identities = 89/99 (89%), Positives = 90/99 (90%)
Frame = +2 / +3
Query: 5 TSCSGSLW*HGTWI*KG*YPVFAYEQRSYSHRRNSCFQYRWP*NSNCPPRN*GP*TSGHC 184
TSCSGSLW*HG WI*KG*YPVFAYEQRSYSH RNSCFQ RW *NSNC P +*GP*TSGHC
Sbjct: 216 TSCSGSLW*HGAWI*KG*YPVFAYEQRSYSHGRNSCFQCRWS*NSNCSPCD*GP*TSGHC 395
Query: 185 RSGHPHQR*Q*FWG*PTIICTWAALAPATSHYGTCCGLP 301
SGHPHQR*Q*FWG PTIICTWAALAPATSHYGTC GLP
Sbjct: 396 TSGHPHQR*Q*FWGRPTIICTWAALAPATSHYGTCRGLP 512
Score = 221 bits (478), Expect = 9e-057
Identities = 95/99 (95%), Positives = 95/99 (95%)
Frame = -3 / -3
Query: 301 R*PTARPIM*CCWSQSCPCAYNSRSSPKLLSPLVRMSTSAVS*RSWTLITRWTIGISRPS 122
R*P ARPIM*CCWSQSCPCAYNSRSSPKLLSPLVRMST AVS*RSWTLITR TIGISRPS
Sbjct: 512 R*PPARPIM*CCWSQSCPCAYNSRSSPKLLSPLVRMSTCAVS*RSWTLITR*TIGISRPS 333
Query: 121 ILKTTISPVRIGSLLICKNRISPLLNPGSMLPERTTTTG 5
LKTTISPVRIGSLLICKNRISPLLNPGSMLPERTTTTG
Sbjct: 332 TLKTTISPVRIGSLLICKNRISPLLNPGSMLPERTTTTG 216
Score = 219 bits (473), Expect = 4e-056
Identities = 88/99 (88%), Positives = 92/99 (92%)
Frame = -2 / -2
Query: 302 KVAHSTSHNVMLLEPKLPMCI**SVIPKIIVTFGEDVHFCSVLTFMDLNYAVDNWNFTAI 123
KVA TSHNVMLLEP+LPMCI**SV+PKIIVTFGEDVH CSVLTFMDLN+ V+NWNFT I
Sbjct: 513 KVAPGTSHNVMLLEPELPMCI**SVVPKIIVTFGEDVHLCSVLTFMDLNHTVNNWNFTTI 334
Query: 122 DIENNYFSCANRIFAHMQKQDITPFKSRFHATRENHYNW 6
DIENNYFS ANRIFAHMQKQDITPFKSR HATRENHYNW
Sbjct: 333 DIENNYFSRANRIFAHMQKQDITPFKSRLHATRENHYNW 217
Score = 206 bits (444), Expect = 4e-052
Identities = 89/100 (89%), Positives = 92/100 (92%)
Frame = +1 / +2
Query: 4 HQL*WFSLVAWNLDLKGVISCFCI*AKILFAQEK*LFSISMAVKFQLSTA*LRSMNVRTL 183
HQL*WFSLVAW+LDLKGVISCFCI*AKILFA+EK*LFS+SM VKFQL T *LRSMNVRTL
Sbjct: 215 HQL*WFSLVAWSLDLKGVISCFCI*AKILFAREK*LFSMSMVVKFQLFTV*LRSMNVRTL 394
Query: 184 QKWTSSPKVTIILGMTDYYMHMGSFGSSNITLWDVLWATF 303
KWTSSPKVTIILG TDYYMHMGS GSSNITLWDV ATF
Sbjct: 395 HKWTSSPKVTIILGTTDYYMHMGSSGSSNITLWDVPGATF 514
>gb|CF486594.1|CF486594 POL1_38_D04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_38_D04_A002 5', mRNA sequence
Length = 716
Score = 122 bits (261), Expect(2) = 1e-055
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +3 / +2
Query: 54 GDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDR 233
GDILFLHM+KDP+RTG+IVVFNI+GR+IPIVHRVIKVHER AE D+LTKGDNN DDR
Sbjct: 122 GDILFLHMNKDPVRTGDIVVFNIEGRDIPIVHRVIKVHERHGMAEFDVLTKGDNNRDDDR 301
Query: 234 L 236
+
Sbjct: 302 M 304
Score = 116 bits (247), Expect(2) = 1e-055
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +3 / +2
Query: 234 LLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLLIGALGLLVITSKD*S 407
+LYA+GQLWLQ+ HI+GRAVGYLPY GW+TI MTEKP +KYLLIGALGLLV+ SK+*S
Sbjct: 308 MLYANGQLWLQRQHIIGRAVGYLPYAGWLTIAMTEKPVLKYLLIGALGLLVVASKE*S 481
Score = 106 bits (227), Expect(2) = 3e-042
Identities = 47/60 (78%), Positives = 51/60 (85%)
Frame = -3 / -3
Query: 232 RSSPKLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISP 53
RSS +LLSP VR S SA+ RS TLITRWTIGISRPSILKTT+SPVR GSL +CKNRISP
Sbjct: 300 RSSSRLLSPFVRTSNSAIPWRS*TLITRWTIGISRPSILKTTMSPVRTGSLFMCKNRISP 121
Score = 89.5 bits (189), Expect(2) = 3e-034
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = -2 / -2
Query: 233 SVIPKIIVTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQDIT 54
SVI +IVTF ED+ FC + F++L++ +DNWN TA+DIENNY S A+R+ H+ KQDIT
Sbjct: 301 SVIVTVIVTFCEDIKFCHTMAFVNLDHTMDNWNITALDIENNYVSRADRVLIHV*KQDIT 122
Score = 86.8 bits (183), Expect(2) = 3e-042
Identities = 41/59 (69%), Positives = 42/59 (71%)
Frame = -3 / -3
Query: 412 LTL*SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYN 236
L L S D TS PSAPISRYL GFSVM IV P GR*PTARPIM C SQSCP AY+
Sbjct: 486 LQLHSLDATTSSPSAPISRYLRTGFSVMAIVSHPA*GR*PTARPIMCCR*SQSCPFAYS 310
Score = 81.3 bits (171), Expect(2) = 1e-026
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +2 / +1
Query: 239 ICTWAALAPATSHYGTCCGLPSICWLDYNYHD*ETIY*VPADWCTGLAGHNVERLECQTS 418
+C WAALA AT+HY T C L ++CW+ YN HD ET V A+WCTG AG +++ ++ +
Sbjct: 313 VCKWAALASATAHYWTGCWLSALCWVAYNRHDGETSPQVSANWCTGAAGCSIQGVKLKID 492
Query: 419 R 421
R
Sbjct: 493 R 495
Score = 77.6 bits (163), Expect(2) = 3e-034
Identities = 28/50 (56%), Positives = 39/50 (78%)
Frame = -2 / -2
Query: 389 YDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI 240
Y+QQ QCTN Q+L WFL H +C P +I ++A+S S+NV+ L+PKLP+CI
Sbjct: 463 YNQQPQCTN*QILEDWFLRHGDCKPPSIRQIANSPSNNVLSLKPKLPICI 314
Score = 71.6 bits (150), Expect(2) = 8e-023
Identities = 36/72 (50%), Positives = 38/72 (52%)
Frame = -1 / -1
Query: 267 AGAKAAHVHIIVGHPQNYCHLW*GCPLLQCPDVHGP*LRGGQLEFHGHRY*KQLFLLCE* 88
A A H GH YCHL *G +L V P* GQLE+HG RY*KQL L C
Sbjct: 335 AKAAHLHTAFPFGHRHGYCHLL*GHQILPYHGVREP*SHDGQLEYHGPRY*KQLCLPCGQ 156
Query: 87 DLCSYAKTGYHP 52
S KTGYHP
Sbjct: 155 GPYSCVKTGYHP 120
Score = 60.2 bits (125), Expect(2) = 1e-026
Identities = 30/55 (54%), Positives = 35/55 (63%)
Frame = +2 / +1
Query: 53 G*YPVFAYEQRSYSHRRNSCFQYRWP*NSNCPPRN*GP*TSGHCRSGHPHQR*Q* 217
G*YPVF +E H R+SCFQYR P* SNCP + G T + R PH+R*Q*
Sbjct: 121 G*YPVFTHE*GPCPHGRHSCFQYRGP*YSNCPSCDQGSRTPWYGRI*CPHKR*Q* 285
Score = 57.0 bits (118), Expect(2) = 8e-023
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = -1 / -1
Query: 384 PASPVHQSAGT**MVSQS**L*SSQHMEGSPQHVP*CDVAGAKAAHVH 241
PA+PVHQ A T* +VS S L*++QH S Q V *C VA AKAAH+H
Sbjct: 458 PAAPVHQLADT*GLVSPSWRL*ATQHKADSQQPVQ*CAVAEAKAAHLH 315
>gb|CN129249.1|CN129249 RHOH1_34_G11.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_G11_A002 3', mRNA sequence
Length = 814
Score = 122 bits (261), Expect(2) = 8e-055
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +3 / +1
Query: 54 GDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDR 233
GDILFLHM+KDP+RTG+IVVFNI+GR+IPIVHRVIKVHER AE D+LTKGDNN DDR
Sbjct: 277 GDILFLHMNKDPVRTGDIVVFNIEGRDIPIVHRVIKVHERHGMAEFDVLTKGDNNRDDDR 456
Query: 234 L 236
+
Sbjct: 457 M 459
Score = 113 bits (241), Expect(2) = 8e-055
Identities = 44/58 (75%), Positives = 52/58 (89%)
Frame = +3 / +1
Query: 234 LLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLLIGALGLLVITSKD*S 407
+LYA+GQLWLQ+ HI+GRAVGYLPY GW+TI MTEKP +KYLLIGALG LV+ SK+*S
Sbjct: 463 MLYANGQLWLQRQHIIGRAVGYLPYAGWLTIAMTEKPVLKYLLIGALGRLVVASKE*S 636
Score = 106 bits (227), Expect(2) = 2e-042
Identities = 47/60 (78%), Positives = 51/60 (85%)
Frame = -3 / -3
Query: 232 RSSPKLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISP 53
RSS +LLSP VR S SA+ RS TLITRWTIGISRPSILKTT+SPVR GSL +CKNRISP
Sbjct: 455 RSSSRLLSPFVRTSNSAIPWRS*TLITRWTIGISRPSILKTTMSPVRTGSLFMCKNRISP 276
Score = 87.7 bits (185), Expect(2) = 2e-042
Identities = 41/59 (69%), Positives = 43/59 (72%)
Frame = -3 / -3
Query: 412 LTL*SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYN 236
L L S D TS+PSAPISRYL GFSVM IV P GR*PTARPIM C SQSCP AY+
Sbjct: 641 LQLHSLDATTSRPSAPISRYLRTGFSVMAIVSHPA*GR*PTARPIMCCR*SQSCPFAYS 465
Score = 87.2 bits (184), Expect(2) = 9e-033
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = -2 / -2
Query: 233 SVIPKIIVTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQDIT 54
SVI +IVTF ED+ FC + F++L++ +DNWN TA++IENNY S A+R+ H+ KQDIT
Sbjct: 456 SVIVTVIVTFCEDIKFCHTMAFVNLDHTMDNWNITALNIENNYVSRADRVLIHV*KQDIT 277
Score = 81.3 bits (171), Expect(2) = 1e-025
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +2 / +3
Query: 239 ICTWAALAPATSHYGTCCGLPSICWLDYNYHD*ETIY*VPADWCTGLAGHNVERLECQTS 418
+C WAALA AT+HY T C L ++CW+ YN HD ET V A+WCTG AG +++ ++ +
Sbjct: 468 VCKWAALASATAHYWTGCWLSALCWVAYNRHDGETSPQVSANWCTGAAGCSIQGVKLKID 647
Query: 419 R 421
R
Sbjct: 648 R 650
Score = 74.8 bits (157), Expect(2) = 9e-033
Identities = 27/50 (54%), Positives = 38/50 (76%)
Frame = -2 / -2
Query: 389 YDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI 240
Y+Q QCTN Q+L WFL H +C P +I ++A+S S+NV+ L+PKLP+CI
Sbjct: 618 YNQPPQCTN*QILEDWFLRHGDCKPPSIRQIANSPSNNVLSLKPKLPICI 469
Score = 69.8 bits (146), Expect(2) = 3e-022
Identities = 35/72 (48%), Positives = 38/72 (52%)
Frame = -1 / -1
Query: 267 AGAKAAHVHIIVGHPQNYCHLW*GCPLLQCPDVHGP*LRGGQLEFHGHRY*KQLFLLCE* 88
A A H GH YCHL *G +L V P* GQLE+HG +Y*KQL L C
Sbjct: 490 AKAAHLHTAFPFGHRHGYCHLL*GHQILPYHGVREP*SHDGQLEYHGPQY*KQLCLPCGQ 311
Query: 87 DLCSYAKTGYHP 52
S KTGYHP
Sbjct: 310 GPYSCVKTGYHP 275
Score = 57.0 bits (118), Expect(2) = 1e-025
Identities = 32/61 (52%), Positives = 37/61 (60%)
Frame = +1 / +2
Query: 55 VISCFCI*AKILFAQEK*LFSISMAVKFQLSTA*LRSMNVRTLQKWTSSPKVTIILGMTD 234
VISCF * + L A+E *LFSI AV FQLS * R N Q SS KVTI + MT+
Sbjct: 278 VISCFYT*IRTLSARET*LFSILRAVIFQLSIV*SRFTNAMVWQNLMSSQKVTITVTMTE 457
Query: 235 Y 237
+
Sbjct: 458 W 460
Score = 57.0 bits (118), Expect(2) = 3e-022
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = -1 / -1
Query: 384 PASPVHQSAGT**MVSQS**L*SSQHMEGSPQHVP*CDVAGAKAAHVH 241
PA+PVHQ A T* +VS S L*++QH S Q V *C VA AKAAH+H
Sbjct: 613 PAAPVHQLADT*GLVSPSWRL*ATQHKADSQQPVQ*CAVAEAKAAHLH 470
>gb|BM318165.1|BM318165 PI1_79_C07.g9_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 511
Score = 121 bits (259), Expect(3) = 2e-051
Identities = 46/49 (93%), Positives = 47/49 (95%)
Frame = -2 / -2
Query: 407 TLIFRRYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLE 261
+LIFRRYDQQAQC NQQVLNKWFLSHDNCNPANIWKVAH TSHNVMLLE
Sbjct: 147 SLIFRRYDQQAQCANQQVLNKWFLSHDNCNPANIWKVAHGTSHNVMLLE 1
Score = 114 bits (244), Expect(4) = 6e-049
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = +3 / +1
Query: 261 LQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLLIGALGLLVITSKD* 404
LQQHHIMGRAVGYLPYVGW+TIIMTEKPFIKYLLIGALGLLVITSKD*
Sbjct: 1 LQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD* 144
Score = 113 bits (242), Expect(3) = 1e-041
Identities = 44/48 (91%), Positives = 44/48 (91%)
Frame = +2 / +3
Query: 263 PATSHYGTCCGLPSICWLDYNYHD*ETIY*VPADWCTGLAGHNVERLE 406
PATSHYGTC GLPSICWL YNYHD*ETIY*VPADW GLAGHNVERLE
Sbjct: 3 PATSHYGTCRGLPSICWLGYNYHD*ETIY*VPADWRIGLAGHNVERLE 146
Score = 113 bits (242), Expect(3) = 4e-046
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +1 / +2
Query: 262 SSNITLWDVLWATFHMLAGLQLS*LRNHLLSTC*LVHWACWS*RRKIR 405
SSNITLWDV WATFHMLAGLQLS*LRNHLLSTC*L HWACWS*RRKIR
Sbjct: 2 SSNITLWDVPWATFHMLAGLQLS*LRNHLLSTC*LAHWACWS*RRKIR 145
Score = 111 bits (236), Expect(3) = 2e-046
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = -3 / -3
Query: 406 L*SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCW 263
L*SFDVMTSKP+APISRYLINGFSVMIIV QPTYGR*PTARPIM*CCW
Sbjct: 146 L*SFDVMTSKPNAPISRYLINGFSVMIIVTQPTYGR*PTARPIM*CCW 3
Score = 94.1 bits (199), Expect(3) = 2e-036
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = -1 / -1
Query: 405 SNLSTL*PASPVHQSAGT**MVSQS**L*SSQHMEGSPQHVP*CDVAG 262
SNLSTL*PASP+ QSAGT**MVSQS**L* SQHMEGSP+HVP*CDVAG
Sbjct: 145 SNLSTL*PASPMRQSAGT**MVSQS**L*PSQHMEGSPRHVP*CDVAG 2
Score = 68.9 bits (144), Expect(3) = 2e-051
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = -2 / -3
Query: 536 LSVYKQIFSFDPWCNRTASLNAAKPITSDVAP*EQNLY 423
L+V K+ FSFD W NRTASLNAAKP+TS VAP*EQNL+
Sbjct: 278 LTVDKEFFSFDTWWNRTASLNAAKPLTSAVAP*EQNLH 165
Score = 64.8 bits (135), Expect(3) = 2e-046
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = -3 / -1
Query: 535 SQSINKYSRLIHGATERLLLTQQSQ*PLMLHHKSKIYTA 419
SQ I SRLIHG TERLLLT +S *PL+LHHKSKIY A
Sbjct: 277 SQ*IKNSSRLIHGGTERLLLTLRSH*PLLLHHKSKIYMA 161
Score = 62.0 bits (129), Expect(3) = 4e-046
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +1 / +1
Query: 427 RFCSYGATSEVIGFAALREAVLLHHGSNENICL*T 531
RFCSYGAT+EV GFAALREAVL HH SNE L T
Sbjct: 169 RFCSYGATAEVSGFAALREAVLFHHVSNEKNSLST 273
Score = 62.0 bits (129), Expect(4) = 6e-049
Identities = 27/36 (75%), Positives = 28/36 (77%)
Frame = +3 / +3
Query: 420 AV*ILLLWCNIRGYWLCCVKRSRSVAPWIKREYLFI 527
A+*ILLLWCN RG WL VKRSRSV P IKRE FI
Sbjct: 162 AM*ILLLWCNSRGQWLRSVKRSRSVPPCIKREEFFI 269
Score = 54.2 bits (112), Expect(3) = 1e-041
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +2 / +2
Query: 425 IDFALMVQHQRLLALLR*EKPFCCTMDQTRIFVYRL 532
+DFALMVQ QR +A R*EKPFC TM QTR +Y L
Sbjct: 167 VDFALMVQQQRSVASQR*EKPFCSTMYQTRRILYLL 274
Score = 52.4 bits (108), Expect(3) = 2e-051
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -1 / -3
Query: 627 NNELVQLIS*AKNTKRWMLDENRLSN*WAGALSL 526
+ L+QLIS TKR MLDENRLSN*WAGAL++
Sbjct: 371 HRRLIQLISYGTTTKR*MLDENRLSN*WAGALTV 270
Score = 50.6 bits (104), Expect(4) = 6e-049
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +2 / +1
Query: 530 LRAPAH*LDSRFSSSIHLLVFLA*LMS*TS 619
+RAPAH*LDSRFSSSIHL V + *LMS* S
Sbjct: 274 VRAPAH*LDSRFSSSIHLFVVVP*LMS*IS 363
Score = 50.6 bits (104), Expect(3) = 2e-046
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = -2 / -1
Query: 638 SSNRTTNWFNSLARLKIPKDGCWMRTDYLISGQVLS 531
S+ T + FNSLA ++ KD CWMRTDY ISGQV S
Sbjct: 382 SNITTDD*FNSLAMAQLQKDECWMRTDYPISGQVPS 275
Score = 50.1 bits (103), Expect(3) = 2e-036
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = -1 / -2
Query: 516 ILV*SMVQQNGFS*RSKANNL*CCTIRAKS 427
+LV* MV+QNGFS*R +A +L CCTIRAKS
Sbjct: 258 LLV*YMVEQNGFS*RCEATDLCCCTIRAKS 169
Score = 49.2 bits (101), Expect(3) = 4e-046
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +1 / +3
Query: 532 ESTCPLIR*SVLIQHPSFGIFSLANELNQFVVLFDD 639
E TCPLI *SVLIQH SF ++ANELNQ V+ D
Sbjct: 276 EGTCPLIG*SVLIQHSSFCSCAIANELNQSSVVIFD 383
Score = 47.8 bits (98), Expect(3) = 2e-036
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = -3 / -2
Query: 619 TGSTH*LG*KYQKMDAG*EPTI*LVGRCSQS 527
T STH*L Y+KM+AG*EPTI LVGRC S
Sbjct: 363 TDSTH*LWHNYKKMNAG*EPTIQLVGRCPHS 271
Score = 41.8 bits (85), Expect(3) = 1e-041
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +3 / +2
Query: 510 REYLFID*EHLPTN*IVGSHPASIFWYF*PS**VEPV 620
R L++ * HLPTN IVGSHPA IF S**VE V
Sbjct: 254 RRILYLL*GHLPTNWIVGSHPAFIFL*LCHS**VESV 364
Score = 25.4 bits (49), Expect(4) = 6e-049
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2 / +1
Query: 623 LFYLMITIHCSFPGN 667
L+ + IT+HCS GN
Sbjct: 373 LYSMKITLHCSLAGN 417
>gb|CN129333.1|CN129333 RHOH1_34_G11.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_G11_A002 5', mRNA sequence
Length = 825
Score = 119 bits (254), Expect(3) = 2e-031
Identities = 47/61 (77%), Positives = 54/61 (88%)
Frame = +3 / +3
Query: 54 GDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDR 233
GDILFLHM+KDP+RTG+IVVFNI+GR+IPIVHRVIKVHER AE D+LTKGDNN D R
Sbjct: 609 GDILFLHMNKDPVRTGDIVVFNIEGRDIPIVHRVIKVHERHGMAEFDVLTKGDNNRDDHR 788
Query: 234 L 236
+
Sbjct: 789 M 791
Score = 103 bits (219), Expect(2) = 2e-024
Identities = 46/60 (76%), Positives = 50/60 (83%)
Frame = -3 / -3
Query: 232 RSSPKLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISP 53
R S +LLSP VR S SA+ RS TLITRWTIGISRPSILKTT+SPVR GSL +CKNRISP
Sbjct: 787 R*SSRLLSPFVRTSNSAIPWRS*TLITRWTIGISRPSILKTTMSPVRTGSLFMCKNRISP 608
Score = 35.0 bits (70), Expect(3) = 2e-031
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3 / +2
Query: 3 APVVVVLSGSMEPGFKR 53
+PVVVVLS SMEPGF+R
Sbjct: 143 SPVVVVLSESMEPGFRR 193
Score = 33.1 bits (66), Expect(2) = 2e-024
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2 / -3
Query: 68 KQDITPFKSRFHATRENHYNW 6
K + P KSR HA R NH+NW
Sbjct: 208 KGGMNPSKSRLHAFR*NHHNW 146
Score = 24.9 bits (48), Expect(3) = 2e-031
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +3 / +3
Query: 234 LLYAHGQLWL 263
+LYA+GQLWL
Sbjct: 795 MLYANGQLWL 824
>gb|CL183302.1|CL183302 104_395_10898081_116_31918_305 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10898081, DNA
sequence
Length = 749
Score = 68.9 bits (144), Expect(3) = 1e-028
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = -2 / -1
Query: 536 LSVYKQIFSFDPWCNRTASLNAAKPITSDVAP*EQNLY 423
L+V K+ FSFD W NRTASLNAAKP+TS VAP*EQNL+
Sbjct: 227 LTVDKEFFSFDTWWNRTASLNAAKPLTSAVAP*EQNLH 114
Score = 64.8 bits (135), Expect(3) = 8e-026
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = -3 / -2
Query: 535 SQSINKYSRLIHGATERLLLTQQSQ*PLMLHHKSKIYTA 419
SQ I SRLIHG TERLLLT +S *PL+LHHKSKIY A
Sbjct: 226 SQ*IKNSSRLIHGGTERLLLTLRSH*PLLLHHKSKIYMA 110
Score = 62.0 bits (129), Expect(3) = 7e-025
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +1 / +1
Query: 427 RFCSYGATSEVIGFAALREAVLLHHGSNENICL*T 531
RFCSYGAT+EV GFAALREAVL HH SNE L T
Sbjct: 118 RFCSYGATAEVSGFAALREAVLFHHVSNEKNSLST 222
Score = 62.0 bits (129), Expect(4) = 5e-029
Identities = 27/36 (75%), Positives = 28/36 (77%)
Frame = +3 / +3
Query: 420 AV*ILLLWCNIRGYWLCCVKRSRSVAPWIKREYLFI 527
A+*ILLLWCN RG WL VKRSRSV P IKRE FI
Sbjct: 111 AM*ILLLWCNSRGQWLRSVKRSRSVPPCIKREEFFI 218
Score = 52.4 bits (108), Expect(3) = 1e-028
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -1 / -1
Query: 627 NNELVQLIS*AKNTKRWMLDENRLSN*WAGALSL 526
+ L+QLIS TKR MLDENRLSN*WAGAL++
Sbjct: 320 HRRLIQLISYGTTTKR*MLDENRLSN*WAGALTV 219
Score = 50.6 bits (104), Expect(3) = 8e-026
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = -2 / -2
Query: 638 SSNRTTNWFNSLARLKIPKDGCWMRTDYLISGQVLS 531
S+ T + FNSLA ++ KD CWMRTDY ISGQV S
Sbjct: 331 SNITTDD*FNSLAMAQLQKDECWMRTDYPISGQVPS 224
Score = 50.6 bits (104), Expect(4) = 5e-029
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +2 / +1
Query: 530 LRAPAH*LDSRFSSSIHLLVFLA*LMS*TS 619
+RAPAH*LDSRFSSSIHL V + *LMS* S
Sbjct: 223 VRAPAH*LDSRFSSSIHLFVVVP*LMS*IS 312
Score = 49.2 bits (101), Expect(3) = 7e-025
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +1 / +3
Query: 532 ESTCPLIR*SVLIQHPSFGIFSLANELNQFVVLFDD 639
E TCPLI *SVLIQH SF ++ANELNQ V+ D
Sbjct: 225 EGTCPLIG*SVLIQHSSFCSCAIANELNQSSVVIFD 332
Score = 46.4 bits (95), Expect(4) = 5e-029
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1 / +2
Query: 352 STC*LVHWACWS*RRKIR 405
STC*L HWACWS*RRKIR
Sbjct: 41 STC*LAHWACWS*RRKIR 94
Score = 44.6 bits (91), Expect(3) = 1e-028
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -2 / -3
Query: 407 TLIFRRYDQQAQCTNQQVLNK 345
+LIFRRYDQQAQC NQQVL +
Sbjct: 96 SLIFRRYDQQAQCANQQVLQQ 34
Score = 41.8 bits (85), Expect(3) = 7e-025
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2 / +3
Query: 353 VPADWCTGLAGHNVERLE 406
VPADW GLAGHNVERLE
Sbjct: 42 VPADWRIGLAGHNVERLE 95
Score = 40.9 bits (83), Expect(3) = 8e-026
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -3 / -1
Query: 406 L*SFDVMTSKPSAPISRY 353
L*SFDVMTSKP+APISRY
Sbjct: 95 L*SFDVMTSKPNAPISRY 42
Score = 25.4 bits (49), Expect(4) = 5e-029
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2 / +1
Query: 623 LFYLMITIHCSFPGN 667
L+ + IT+HCS GN
Sbjct: 322 LYSMKITLHCSLAGN 366
>gb|CW149327.1|CW149327 104_548_11142430_148_36291_091 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11142430, DNA
sequence
Length = 545
Score = 68.9 bits (144), Expect(3) = 1e-027
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = -2 / -3
Query: 536 LSVYKQIFSFDPWCNRTASLNAAKPITSDVAP*EQNLY 423
L+V K+ FSFD W NRTASLNAAKP+TS VAP*EQNL+
Sbjct: 231 LTVDKEFFSFDTWWNRTASLNAAKPLTSAVAP*EQNLH 118
Score = 64.8 bits (135), Expect(3) = 5e-025
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = -3 / -1
Query: 535 SQSINKYSRLIHGATERLLLTQQSQ*PLMLHHKSKIYTA 419
SQ I SRLIHG TERLLLT +S *PL+LHHKSKIY A
Sbjct: 230 SQ*IKNSSRLIHGGTERLLLTLRSH*PLLLHHKSKIYMA 114
Score = 62.0 bits (129), Expect(3) = 2e-024
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +1 / +2
Query: 427 RFCSYGATSEVIGFAALREAVLLHHGSNENICL*T 531
RFCSYGAT+EV GFAALREAVL HH SNE L T
Sbjct: 122 RFCSYGATAEVSGFAALREAVLFHHVSNEKNSLST 226
Score = 62.0 bits (129), Expect(4) = 5e-028
Identities = 27/36 (75%), Positives = 28/36 (77%)
Frame = +3 / +1
Query: 420 AV*ILLLWCNIRGYWLCCVKRSRSVAPWIKREYLFI 527
A+*ILLLWCN RG WL VKRSRSV P IKRE FI
Sbjct: 115 AM*ILLLWCNSRGQWLRSVKRSRSVPPCIKREEFFI 222
Score = 52.4 bits (108), Expect(3) = 1e-027
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -1 / -3
Query: 627 NNELVQLIS*AKNTKRWMLDENRLSN*WAGALSL 526
+ L+QLIS TKR MLDENRLSN*WAGAL++
Sbjct: 324 HRRLIQLISYGTTTKR*MLDENRLSN*WAGALTV 223
Score = 50.6 bits (104), Expect(4) = 5e-028
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +2 / +2
Query: 530 LRAPAH*LDSRFSSSIHLLVFLA*LMS*TS 619
+RAPAH*LDSRFSSSIHL V + *LMS* S
Sbjct: 227 VRAPAH*LDSRFSSSIHLFVVVP*LMS*IS 316
Score = 50.6 bits (104), Expect(3) = 5e-025
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = -2 / -1
Query: 638 SSNRTTNWFNSLARLKIPKDGCWMRTDYLISGQVLS 531
S+ T + FNSLA ++ KD CWMRTDY ISGQV S
Sbjct: 335 SNITTDD*FNSLAMAQLQKDECWMRTDYPISGQVPS 228
Score = 49.2 bits (101), Expect(3) = 2e-024
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +1 / +1
Query: 532 ESTCPLIR*SVLIQHPSFGIFSLANELNQFVVLFDD 639
E TCPLI *SVLIQH SF ++ANELNQ V+ D
Sbjct: 229 EGTCPLIG*SVLIQHSSFCSCAIANELNQSSVVIFD 336
Score = 43.2 bits (88), Expect(4) = 5e-028
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +1 / +3
Query: 352 STC*LVHWACWS*RRKIR 405
STC*L HWACWS*R KIR
Sbjct: 45 STC*LAHWACWS*RPKIR 98
Score = 41.4 bits (84), Expect(3) = 1e-027
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2 / -2
Query: 407 TLIFRRYDQQAQCTNQQVLNK 345
+LIF RYDQQAQC NQQVL +
Sbjct: 100 SLIFGRYDQQAQCANQQVLQQ 38
Score = 40.5 bits (82), Expect(3) = 2e-024
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2 / +1
Query: 353 VPADWCTGLAGHNVERLE 406
VPADW GLAGHNV+RLE
Sbjct: 46 VPADWRIGLAGHNVQRLE 99
Score = 38.2 bits (77), Expect(3) = 5e-025
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3 / -3
Query: 406 L*SFDVMTSKPSAPISRY 353
L*S DVMTSKP+APISRY
Sbjct: 99 L*SLDVMTSKPNAPISRY 46
Score = 25.4 bits (49), Expect(4) = 5e-028
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2 / +2
Query: 623 LFYLMITIHCSFPGN 667
L+ + IT+HCS GN
Sbjct: 326 LYSMKITLHCSLAGN 370
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,133,559,686
Number of Sequences: 832831
Number of extensions: 17072066
Number of successful extensions: 80041
Number of sequences better than 1.0e-020: 16
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 27921215270
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)