TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493944.2.1
(2055 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX611907.1|CX611907 ANR1_27_H10.b1_A002 Anaerobic roots ... 285 e-140
gb|CL159656.1|CL159656 104_349_10804417_116_31382_241 Sorgh... 240 2e-098
gb|CN135740.1|CN135740 OX1_38_E07.g1_A002 Oxidatively-stres... 255 1e-095
gb|CW276976.1|CW276976 104_750_11405776_148_35399_050 Sorgh... 240 4e-091
gb|CN127871.1|CN127871 RHOH1_25_C09.g1_A002 Acid- and alkal... 243 3e-089
gb|CD228117.1|CD228117 CCC1_5_A09.g1_A007 Callus culture/ce... 226 3e-084
gb|CD227732.1|CD227732 CCC1_53_H10.g1_A007 Callus culture/c... 244 4e-084
gb|CD227907.1|CD227907 CCC1_56_C12.g1_A007 Callus culture/c... 243 1e-083
gb|CF074446.1|CF074446 FE1_24_E03.g1_A002 Iron-deficient se... 244 1e-082
gb|CW276975.1|CW276975 104_750_11405776_116_35395_050 Sorgh... 169 6e-082
gb|CD222254.1|CD222254 CCC1_2_E04.g1_A007 Callus culture/ce... 243 8e-081
gb|CD204377.1|CD204377 HS1_7_F03.g1_A012 Heat-shocked seedl... 244 5e-076
gb|CW394782.1|CW394782 fsbb001f082i17f0 Sorghum methylation... 176 7e-074
gb|CF071286.1|CF071286 FE1_16_A06.g1_A002 Iron-deficient se... 237 1e-073
gb|CW457841.1|CW457841 fsbb001f203n07f0 Sorghum methylation... 165 5e-073
gb|CW449570.1|CW449570 fsbb001f183m13f0 Sorghum methylation... 169 9e-073
gb|CW283797.1|CW283797 104_760_11409436_148_35488_010 Sorgh... 144 5e-072
gb|CD222241.1|CD222241 CCC1_2_D02.g1_A007 Callus culture/ce... 244 6e-072
gb|CF485817.1|CF485817 POL1_33_G12.g1_A002 Pollen Sorghum b... 153 1e-071
gb|CX607759.1|CX607759 ANR1_30_C08.g1_A002 Anaerobic roots ... 89 3e-071
gb|CF488213.1|CF488213 POL1_48_A10.g1_A002 Pollen Sorghum b... 181 2e-070
gb|CF480551.1|CF480551 POL1_66_A09.g1_A002 Pollen Sorghum b... 181 3e-070
gb|CF480721.1|CF480721 POL1_67_B05.g1_A002 Pollen Sorghum b... 181 3e-070
gb|CF486748.1|CF486748 POL1_39_B11.g1_A002 Pollen Sorghum b... 181 3e-070
gb|CF483368.1|CF483368 POL1_21_F08.g1_A002 Pollen Sorghum b... 181 3e-070
gb|CF487273.1|CF487273 POL1_42_F11.g1_A002 Pollen Sorghum b... 181 3e-070
gb|CF483034.1|CF483034 POL1_10_G04.g1_A002 Pollen Sorghum b... 181 3e-070
gb|CF481221.1|CF481221 POL1_70_E03.g1_A002 Pollen Sorghum b... 181 3e-070
gb|CF481558.1|CF481558 POL1_72_E04.g1_A002 Pollen Sorghum b... 181 3e-070
gb|CF483384.1|CF483384 POL1_21_H05.g1_A002 Pollen Sorghum b... 181 3e-070
gb|BE595814.1|BE595814 PI1_54_D08.b1_A002 Pathogen induced ... 267 4e-070
gb|CF483505.1|CF483505 POL1_22_E10.g1_A002 Pollen Sorghum b... 181 6e-070
gb|CF480611.1|CF480611 POL1_66_G02.g1_A002 Pollen Sorghum b... 178 1e-069
gb|CF482541.1|CF482541 POL1_7_C12.g1_A002 Pollen Sorghum bi... 181 1e-069
gb|CF486935.1|CF486935 POL1_40_F03.g1_A002 Pollen Sorghum b... 181 1e-069
gb|CW033209.1|CW033209 104_262_10501822_115_30362 Sorghum m... 141 8e-069
gb|CW439175.1|CW439175 fsbb001f157d01k0 Sorghum methylation... 231 2e-067
gb|CF485659.1|CF485659 POL1_32_G08.g1_A002 Pollen Sorghum b... 181 3e-067
gb|CF485961.1|CF485961 POL1_34_G06.g1_A002 Pollen Sorghum b... 184 2e-066
gb|CW162564.1|CW162564 104_569_11151007_148_36439_018 Sorgh... 164 8e-066
gb|CW199055.1|CW199055 104_624_11183306_148_36855_015 Sorgh... 164 8e-066
gb|CF480720.1|CF480720 POL1_67_B04.g1_A002 Pollen Sorghum b... 181 3e-065
gb|BG560224.1|BG560224 RHIZ2_71_F04.b1_A003 Rhizome2 (RHIZ2... 244 4e-065
gb|CX607675.1|CX607675 ANR1_30_C08.b1_A002 Anaerobic roots ... 209 6e-065
gb|CF483326.1|CF483326 POL1_21_B02.g1_A002 Pollen Sorghum b... 153 4e-062
gb|CW070613.1|CW070613 104_321_10526871_1_30090 Sorghum met... 112 1e-061
gb|CD204267.1|CD204267 HS1_4_A06.g1_A012 Heat-shocked seedl... 173 1e-061
gb|CW298321.1|CW298321 104_780_11462518_116_35647_081 Sorgh... 176 6e-061
gb|CF484492.1|CF484492 POL1_25_D08.g1_A002 Pollen Sorghum b... 181 1e-059
gb|CL151746.1|CL151746 104_334_10779469_114_31361_253 Sorgh... 164 7e-059
gb|CW262737.1|CW262737 104_730_11230244_148_35220_072 Sorgh... 155 6e-058
gb|CW200492.1|CW200492 104_626_11184087_148_36870_064 Sorgh... 117 3e-057
gb|CW200491.1|CW200491 104_626_11184087_116_36869_064 Sorgh... 104 1e-056
gb|CW164970.1|CW164970 104_573_11152260_148_36476_046 Sorgh... 132 7e-056
gb|CW194596.1|CW194596 104_617_11180180_148_36790_066 Sorgh... 164 9e-056
gb|CC059780.1|CC059780 ii28f12.b1 WGS-SbicolorF (DH5a methy... 130 1e-055
gb|CN127791.1|CN127791 RHOH1_25_C09.b1_A002 Acid- and alkal... 139 1e-055
gb|CN132843.1|CN132843 OX1_8_C05.g1_A002 Oxidatively-stress... 93 1e-055
gb|CD425117.1|CD425117 SA1_10_D06.g1_A002 Salicylic acid-tr... 93 6e-055
gb|CF486075.1|CF486075 POL1_35_C03.g1_A002 Pollen Sorghum b... 181 8e-054
gb|CW199054.1|CW199054 104_624_11183306_116_36856_015 Sorgh... 173 9e-053
gb|CD222171.1|CD222171 CCC1_2_E04.b1_A007 Callus culture/ce... 209 2e-052
gb|CD228008.1|CD228008 CCC1_5_A09.b1_A007 Callus culture/ce... 209 2e-052
gb|CX618736.1|CX618736 GABR1_41_H05.b1_A002 GA- or brassino... 209 2e-052
gb|CW298322.1|CW298322 104_780_11462518_148_35651_081 Sorgh... 100 3e-052
gb|CW283796.1|CW283796 104_760_11409436_116_35484_010 Sorgh... 144 1e-051
gb|CF071235.1|CF071235 FE1_16_A06.b1_A002 Iron-deficient se... 206 1e-051
gb|CX618822.1|CX618822 GABR1_41_H05.g1_A002 GA- or brassino... 205 2e-051
gb|CW400388.1|CW400388 fsbb001f090k19f0 Sorghum methylation... 155 2e-048
gb|CD227690.1|CD227690 CCC1_53_F01.b1_A007 Callus culture/c... 189 2e-048
gb|CW265997.1|CW265997 104_735_11232189_116_35271_087 Sorgh... 108 3e-048
gb|CD227870.1|CD227870 CCC1_56_A03.b1_A007 Callus culture/c... 186 3e-048
gb|CX615540.1|CX615540 GABR1_20_F03.g1_A002 GA- or brassino... 85 4e-048
gb|CD226421.1|CD226421 CCC1_45_B12.g1_A007 Callus culture/c... 85 5e-048
gb|CD220374.1|CD220374 CCC1_66_C08.g1_A007 Callus culture/c... 85 5e-048
gb|BE595751.1|BE595751 PI1_54_D08.g1_A002 Pathogen induced ... 192 2e-047
gb|CW498973.1|CW498973 fsbb001f293i01f0 Sorghum methylation... 133 4e-047
gb|CW451017.1|CW451017 fsbb001f189o15k0 Sorghum methylation... 126 1e-046
gb|CN135656.1|CN135656 OX1_38_E07.b1_A002 Oxidatively-stres... 121 2e-046
gb|CX615728.1|CX615728 GABR1_22_F10.b1_A002 GA- or brassino... 81 3e-046
gb|CW385194.1|CW385194 fsbb001f068j07k0 Sorghum methylation... 104 3e-046
gb|CW231622.1|CW231622 104_681_11211220_148_37350_016 Sorgh... 132 2e-045
gb|CW231621.1|CW231621 104_681_11211220_116_37346_016 Sorgh... 132 2e-045
gb|CW310230.1|CW310230 104_799_11469607_116_37434_026 Sorgh... 79 3e-045
gb|CF483429.1|CF483429 POL1_22_E10.b1_A002 Pollen Sorghum b... 109 7e-045
gb|CW151042.1|CW151042 104_551_11143730_148_36309_003 Sorgh... 134 2e-044
gb|CW024039.1|CW024039 104_164_10434722_5_30003 Sorghum met... 126 3e-044
gb|CL181798.1|CL181798 104_392_10896983_148_31925_359 Sorgh... 135 5e-044
gb|CW257600.1|CW257600 104_723_11227424_148_35157_030 Sorgh... 104 6e-044
gb|CW257599.1|CW257599 104_723_11227424_116_35161_030 Sorgh... 117 7e-044
gb|CW453451.1|CW453451 fsbb001f197h09f0 Sorghum methylation... 117 7e-044
gb|CL151747.1|CL151747 104_334_10779469_116_31362_253 Sorgh... 108 4e-043
gb|CW169907.1|CW169907 104_580_11154918_148_36511_029 Sorgh... 100 1e-041
gb|CF484409.1|CF484409 POL1_25_D08.b1_A002 Pollen Sorghum b... 113 3e-041
gb|CW262736.1|CW262736 104_730_11230244_116_35224_072 Sorgh... 155 4e-041
gb|CW050896.1|CW050896 104_291_10514924_114_30192 Sorghum m... 151 6e-041
gb|CW042088.1|CW042088 104_275_10506931_114_30284 Sorghum m... 121 8e-041
gb|CW311563.1|CW311563 104_801_11470297_148_36282_013 Sorgh... 79 9e-041
gb|CW073779.1|CW073779 104_339_10781480_114_31371_344 Sorgh... 169 2e-040
gb|CW457045.1|CW457045 fsbb001f202l01f0 Sorghum methylation... 155 9e-040
gb|CW492384.1|CW492384 fsbb001f282k08f0 Sorghum methylation... 94 1e-039
gb|BZ781398.1|BZ781398 ii28f12.g1 WGS-SbicolorF (DH5a methy... 100 2e-039
gb|CW473332.1|CW473332 fsbb001f228k15f0 Sorghum methylation... 77 7e-039
gb|CW269966.1|CW269966 104_741_11402135_116_35322_090 Sorgh... 121 1e-038
gb|CX611701.1|CX611701 ANR1_26_E07.b1_A002 Anaerobic roots ... 81 1e-038
gb|CD425062.1|CD425062 SA1_10_D06.b1_A002 Salicylic acid-tr... 81 2e-038
gb|CX615975.1|CX615975 GABR1_25_C07.b1_A002 GA- or brassino... 79 4e-038
gb|CL159183.1|CL159183 104_348_10804077_114_31379_285 Sorgh... 86 2e-037
gb|CW174586.1|CW174586 104_586_11157486_116_36565_019 Sorgh... 82 2e-037
gb|CW163223.1|CW163223 104_570_11151351_116_36449_052 Sorgh... 82 2e-037
gb|CW384798.1|CW384798 fsbb001f067p17f0 Sorghum methylation... 75 3e-037
gb|CW469126.1|CW469126 fsbb001f221l01f0 Sorghum methylation... 155 5e-037
gb|CW265998.1|CW265998 104_735_11232189_148_35267_087 Sorgh... 132 7e-037
gb|CW130478.1|CW130478 104_513_11115136_116_34781_064 Sorgh... 98 1e-036
gb|CN132764.1|CN132764 OX1_8_C05.b1_A002 Oxidatively-stress... 81 1e-036
gb|CW457046.1|CW457046 fsbb001f202l01k0 Sorghum methylation... 132 2e-036
gb|CW176524.1|CW176524 104_589_11158533_148_36583_087 Sorgh... 79 9e-036
gb|CW394783.1|CW394783 fsbb001f082i17k0 Sorghum methylation... 94 3e-035
gb|CX616053.1|CX616053 GABR1_25_C07.g1_A002 GA- or brassino... 91 3e-034
gb|BZ349897.1|BZ349897 hr47a12.g1 WGS-SbicolorF (JM107 adap... 75 3e-034
gb|BE361549.1|BE361549 DG1_81_H04.b1_A002 Dark Grown 1 (DG1... 96 6e-034
gb|CF485887.1|CF485887 POL1_34_G06.b1_A002 Pollen Sorghum b... 107 3e-033
gb|CW100262.1|CW100262 104_467_11004005_116_34388_021 Sorgh... 83 9e-033
gb|CW427480.1|CW427480 fsbb001f139i05k0 Sorghum methylation... 104 1e-032
gb|CW310231.1|CW310231 104_799_11469607_148_37433_026 Sorgh... 85 2e-032
gb|CD204280.1|CD204280 HS1_7_F03.b1_A012 Heat-shocked seedl... 141 3e-032
gb|CF485997.1|CF485997 POL1_35_C03.b1_A002 Pollen Sorghum b... 109 4e-032
gb|CF482955.1|CF482955 POL1_10_G04.b1_A002 Pollen Sorghum b... 109 4e-032
gb|CW415441.1|CW415441 fsbb001f115i18f0 Sorghum methylation... 100 4e-032
gb|CB925835.1|CB925835 ABA1_23_E07.g1_A012 Abscisic acid-tr... 79 4e-032
gb|CW449571.1|CW449571 fsbb001f183m13k0 Sorghum methylation... 140 6e-032
gb|AW286079.2|AW286079 LG1_261_B06.b1_A002 Light Grown 1 (L... 85 1e-031
gb|CL165107.1|CL165107 104_359_10808361_114_31816_345 Sorgh... 98 2e-031
gb|CW156830.1|CW156830 104_560_11146901_116_36379_031 Sorgh... 138 3e-031
gb|CW400389.1|CW400389 fsbb001f090k19k0 Sorghum methylation... 134 4e-031
gb|CW498974.1|CW498974 fsbb001f293i01k0 Sorghum methylation... 132 4e-031
gb|CD204160.1|CD204160 HS1_4_A06.b1_A012 Heat-shocked seedl... 138 4e-031
gb|CW156831.1|CW156831 104_560_11146901_148_36380_031 Sorgh... 124 4e-031
gb|CF489729.1|CF489729 POL1_59_G05.b1_A002 Pollen Sorghum b... 109 5e-031
gb|CW473333.1|CW473333 fsbb001f228k15k0 Sorghum methylation... 74 9e-031
gb|CF483310.1|CF483310 POL1_21_H05.b1_A002 Pollen Sorghum b... 105 2e-030
gb|CW306883.1|CW306883 104_792_11467079_148_35713_084 Sorgh... 135 3e-030
gb|CF483263.1|CF483263 POL1_21_B02.b1_A002 Pollen Sorghum b... 102 1e-029
gb|CW163224.1|CW163224 104_570_11151351_148_36450_052 Sorgh... 100 2e-029
gb|CF770834.1|CF770834 DSBF1_10_C07.g1_A010 Drought-stresse... 132 2e-029
gb|CW269967.1|CW269967 104_741_11402135_148_35326_090 Sorgh... 100 2e-029
gb|CF073131.1|CF073131 FE1_28_G09.b1_A002 Iron-deficient se... 68 4e-029
gb|CW022071.1|CW022071 104_161_10431625_1_30006 Sorghum met... 131 5e-029
gb|CD222173.1|CD222173 CCC1_2_D02.b1_A007 Callus culture/ce... 129 1e-028
gb|CW172359.1|CW172359 104_583_11156250_116_36540_071 Sorgh... 68 1e-028
gb|CF486860.1|CF486860 POL1_40_F03.b1_A002 Pollen Sorghum b... 109 2e-028
gb|CW385193.1|CW385193 fsbb001f068j07f0 Sorghum methylation... 104 4e-028
gb|CL181797.1|CL181797 104_392_10896983_116_31926_359 Sorgh... 104 4e-028
gb|CW042642.1|CW042642 104_276_10507205_114_30482 Sorghum m... 104 4e-028
gb|CW065109.1|CW065109 104_311_10522954_114_30122 Sorghum m... 104 4e-028
gb|CW051351.1|CW051351 104_291_10515200_115_30196 Sorghum m... 76 7e-028
gb|CW294614.1|CW294614 104_775_11415280_148_35609_054 Sorgh... 75 3e-027
gb|CX615454.1|CX615454 GABR1_20_F03.b1_A002 GA- or brassino... 60 7e-027
gb|CF482134.1|CF482134 POL1_5_C01.b1_A002 Pollen Sorghum bi... 111 2e-026
gb|CW107381.1|CW107381 104_477_11096552_148_34471_022 Sorgh... 121 4e-026
gb|CW300032.1|CW300032 104_783_11463432_148_36247_092 Sorgh... 121 4e-026
gb|CW091311.1|CW091311 104_453_10998475_114_33030_078 Sorgh... 62 1e-025
gb|CW050897.1|CW050897 104_291_10514924_115_30196 Sorghum m... 104 1e-025
gb|BM327695.1|BM327695 PIC1_16_B09.g1_A002 Pathogen-infecte... 57 4e-025
gb|CW221655.1|CW221655 104_656_11198025_148_37167_033 Sorgh... 79 6e-025
gb|CD220266.1|CD220266 CCC1_66_C08.b1_A007 Callus culture/c... 60 2e-024
gb|BM323172.1|BM323172 PIC1_16_B09.b1_A002 Pathogen-infecte... 62 5e-024
gb|BM323941.1|BM323941 PIC1_29_D10.b1_A002 Pathogen-infecte... 62 5e-024
gb|CL186635.1|CL186635 104_401_10900337_116_32410_069 Sorgh... 73 6e-024
gb|CW065110.1|CW065110 104_311_10522954_115_30121 Sorghum m... 113 1e-023
gb|CW046110.1|CW046110 104_283_10509970_114_30137 Sorghum m... 65 2e-023
gb|CW225943.1|CW225943 104_663_11204625_148_37212_035 Sorgh... 100 3e-023
gb|CW107380.1|CW107380 104_477_11096552_116_34475_022 Sorgh... 100 3e-023
gb|CF480470.1|CF480470 POL1_66_A09.b1_A002 Pollen Sorghum b... 109 1e-022
gb|CF480523.1|CF480523 POL1_66_G02.b1_A002 Pollen Sorghum b... 109 1e-022
gb|CF480645.1|CF480645 POL1_67_B05.b1_A002 Pollen Sorghum b... 109 1e-022
gb|CF481133.1|CF481133 POL1_70_E03.b1_A002 Pollen Sorghum b... 109 1e-022
gb|CF481471.1|CF481471 POL1_72_E04.b1_A002 Pollen Sorghum b... 109 1e-022
gb|CF481958.1|CF481958 POL1_75_H12.b1_A002 Pollen Sorghum b... 109 1e-022
gb|CF482465.1|CF482465 POL1_7_C12.b1_A002 Pollen Sorghum bi... 109 1e-022
gb|CF489379.1|CF489379 POL1_57_F01.b1_A002 Pollen Sorghum b... 109 1e-022
gb|CF488132.1|CF488132 POL1_48_A10.b1_A002 Pollen Sorghum b... 108 3e-022
gb|BM328453.1|BM328453 PIC1_29_D10.g1_A002 Pathogen-infecte... 57 4e-022
gb|CF758110.1|CF758110 DSAF1_27_E02.g1_A011 Drought-stresse... 85 4e-022
gb|CF480644.1|CF480644 POL1_67_B04.b1_A002 Pollen Sorghum b... 107 5e-022
gb|CF487185.1|CF487185 POL1_42_F11.b1_A002 Pollen Sorghum b... 107 7e-022
gb|CW084527.1|CW084527 104_427_10945847_114_32505_090 Sorgh... 68 1e-021
gb|BG559635.1|BG559635 RHIZ2_71_F04.g1_A003 Rhizome2 (RHIZ2... 60 3e-021
gb|CW352129.1|CW352129 fsbb001f014e01f0 Sorghum methylation... 77 3e-021
gb|CW091312.1|CW091312 104_453_10998475_116_33034_078 Sorgh... 104 5e-021
gb|CB925747.1|CB925747 ABA1_23_E07.b1_A012 Abscisic acid-tr... 57 6e-021
>gb|CX611907.1|CX611907 ANR1_27_H10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_H10_A002 3', mRNA sequence
Length = 834
Score = 285 bits (617), Expect(2) = e-140
Identities = 120/133 (90%), Positives = 125/133 (93%)
Frame = -1 / +2
Query: 939 AKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTGIQTA 760
AKGWAGIQAIPRTVWLDPSGKQLLQWP+EEVEALR K+VTL+NRVIK G HVEVTGIQTA
Sbjct: 2 AKGWAGIQAIPRTVWLDPSGKQLLQWPVEEVEALRGKAVTLKNRVIKPGQHVEVTGIQTA 181
Query: 759 QADVEVSFEVSPAALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKER 580
QADVEVSFE SP+ALAGAE LDPALA DAERLCGVKRADV+GGVGPFGLWVLASAN KER
Sbjct: 182 QADVEVSFEASPSALAGAERLDPALADDAERLCGVKRADVKGGVGPFGLWVLASANLKER 361
Query: 579 TAVFFRVFKPAAG 541
TAVFFRVFK AAG
Sbjct: 362 TAVFFRVFKAAAG 400
Score = 237 bits (511), Expect(2) = e-140
Identities = 99/114 (86%), Positives = 107/114 (93%)
Frame = -1 / +2
Query: 567 FRVFKPAAGDKPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVES 388
F+ ++ +KPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVES
Sbjct: 383 FKAAAGSSNNKPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVES 562
Query: 387 FGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMNGA* 226
FGAGGKTCILSRVYPSLAIG +ARLYVFNNG+A V+VSRLTAWEMKKP+MNGA*
Sbjct: 563 FGAGGKTCILSRVYPSLAIGNNARLYVFNNGKADVRVSRLTAWEMKKPLMNGA* 724
Score = 233 bits (503), Expect(2) = e-118
Identities = 102/135 (75%), Positives = 102/135 (75%)
Frame = +2 / -1
Query: 536 LSPAAGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPHXXXXXXXXXXXXXXXXX 715
L PAA LNTLKNTAVLSLRLAEASTHSPNGPTPP TSAR TPH
Sbjct: 405 LLPAAALNTLKNTAVLSLRLAEASTHSPNGPTPPFTSARLTPHSLSASSASAGSSRSAPA 226
Query: 716 XXXGDTSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSS 895
GD SKLTSTSACAVCIPVTST CP LITLFLRVT LSASTSS GHCSSCFPLGSS
Sbjct: 225 RADGDASKLTSTSACAVCIPVTSTCCPGLITLFLRVTALPLSASTSSTGHCSSCFPLGSS 46
Query: 896 HTVLGIAWIPAQPLA 940
HTVLGIA IPA PLA
Sbjct: 45 HTVLGIA*IPAHPLA 1
Score = 216 bits (467), Expect(2) = e-118
Identities = 93/105 (88%), Positives = 97/105 (92%)
Frame = +2 / -1
Query: 224 LQAPFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTD 403
L APFM+GFFISHAVRRDTLT A PLLNT*RRA LPMASDG*TL+RM VLPPAPKLSTT+
Sbjct: 726 LHAPFMSGFFISHAVRRDTLTSAFPLLNT*RRALLPMASDG*TLDRMHVLPPAPKLSTTE 547
Query: 404 RSIRLLRDILPFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTTGL 538
RSI+LL DI PFEMSVST PANVGRYRFGFRDDLVGSVHMSTTGL
Sbjct: 546 RSIKLLSDIFPFEMSVSTKPANVGRYRFGFRDDLVGSVHMSTTGL 412
Score = 146 bits (313), Expect(5) = 8e-063
Identities = 63/96 (65%), Positives = 71/96 (73%)
Frame = -3 / +1
Query: 511 PYQXXXXXXXXXPDICRICRHGHLERQDIPEKPDRPVGR*ELRSRGQDLHPLQGLPVAGH 332
PYQ PDICR C HGH + +DI EK DRP+G EL SRGQD+HP+QGLPVA H
Sbjct: 439 PYQVVSEPKPVPPDICRFC*HGHFKWEDIAEKLDRPLGGGELWSRGQDVHPVQGLPVARH 618
Query: 331 RQGRSPLRVQQREGARQGVPSHRVGDEEAGHERGLK 224
RQ R+PLRVQQREG RQGVPSH +GDEEA HE +K
Sbjct: 619 RQQRAPLRVQQREGGRQGVPSHCMGDEEATHEWRMK 726
Score = 140 bits (300), Expect(4) = 4e-074
Identities = 63/108 (58%), Positives = 75/108 (69%)
Frame = +1 / -3
Query: 217 SRSSGPVHDRLLHLPRGETGHLDVRPPVVEHVEASVLADGQRRVDPGEDAGLAPGSEALN 396
S +S +H+ LLHLP ETGH DVR PVVEHVEA V+ADG+RRVDPG+DA LAPGS+AL+
Sbjct: 733 SYTSCAIHEWLLHLPCSETGHPDVRLPVVEHVEARVVADGERRVDPGQDARLAPGSKALH 554
Query: 397 DRPVDQASQGYLAVRDVRVDKSCKCXXXXXXXXXXXXXXXXHEHHGLV 540
R VDQASQ YL + +VRV+K+ KC HEH GLV
Sbjct: 553 HRAVDQASQRYLPI*NVRVNKTGKCRAVQVWVQRRLGRVGAHEHDGLV 410
Score = 122 bits (262), Expect(2) = 3e-037
Identities = 48/67 (71%), Positives = 52/67 (77%)
Frame = +3 / -2
Query: 270 DGTP*RAPSRC*TRRGERPCRWPATGRPWRGCRSCPRLRSSQRPTGRSGFSGISCRSRCP 449
DGTP*R PSRC*TRRG R CRW ATGRPW GC SCPRL+SS P+GRS FS IS +CP
Sbjct: 680 DGTP*RPPSRC*TRRGARCCRWRATGRPWTGCTSCPRLQSSPPPSGRSSFSAISSHLKCP 501
Query: 450 CRQILQM 470
C+Q QM
Sbjct: 500 CQQNRQM 480
Score = 109 bits (232), Expect(2) = 8e-030
Identities = 52/71 (73%), Positives = 54/71 (76%)
Frame = -2 / +3
Query: 527 CSCAPTLPSRP*TRTCTARHLQDLSTRTSRTARYP*EA*STGRSLRASEPGARPASSPGS 348
CSCAPTLPSR *T+TCTARHL L TRT + RY *EA*ST R RA EPGAR AS PGS
Sbjct: 423 CSCAPTLPSRL*TQTCTARHLPVLLTRTFQMGRYR*EA*STARWWRALEPGARRASCPGS 602
Query: 347 TRRWPSARTLA 315
TRR PSA T A
Sbjct: 603 TRRSPSATTRA 635
Score = 94.1 bits (199), Expect(4) = 4e-074
Identities = 38/43 (88%), Positives = 38/43 (88%)
Frame = +1 / -3
Query: 541 AGGGLEHPEEHRGSLLAVGGGQHPQPERPHAAPHVRALHAAQP 669
AGGGLEHPEEHRGSLL VGGGQHPQPER HAA HV AL AAQP
Sbjct: 400 AGGGLEHPEEHRGSLLEVGGGQHPQPERTHAALHVGALDAAQP 272
Score = 71.6 bits (150), Expect(4) = 4e-074
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +1 / -3
Query: 736 EAHLHVSLCRLYPGHLDVMSCLDYPVPESDRLCS 837
EAHLHVSLC LYPGHLDV+S LDYPV ESDRL S
Sbjct: 205 EAHLHVSLCCLYPGHLDVLSWLDYPVLESDRLAS 104
Score = 59.7 bits (124), Expect(2) = 3e-037
Identities = 28/32 (87%), Positives = 28/32 (87%)
Frame = +3 / -2
Query: 729 TLRSSPPRQPVPFVSRSPRRDVLP*LPCS*E* 824
T RSSPPRQPV FVSRSPRR VL *LPCS*E*
Sbjct: 212 TPRSSPPRQPVLFVSRSPRRAVLA*LPCS*E* 117
Score = 55.1 bits (114), Expect(5) = 8e-063
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2 / +3
Query: 812 TG*SRQDITSR*PGYKRHRLTWR*ASK 732
TG*S QD TSR*PGYK+HRLTWR*AS+
Sbjct: 129 TG*SSQDSTSR*PGYKQHRLTWR*ASR 209
Score = 54.2 bits (112), Expect(5) = 8e-063
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = -2 / +3
Query: 935 KAGLESRRFQGRCGWTPVGSSCCSG 861
K G RRF+GRCGWTP GSSCCSG
Sbjct: 6 KGGPGFRRFRGRCGWTPAGSSCCSG 80
Score = 48.3 bits (99), Expect(2) = 8e-030
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = -3 / +1
Query: 916 GDSKDGVAGPQWEXXXXXXXXXXXXAESKVGHSQEQGNQ 800
GDS+DGVAGPQ E A+ + GHSQEQGNQ
Sbjct: 25 GDSEDGVAGPQREAAAAVARRGGRGAQRQGGHSQEQGNQ 141
Score = 38.2 bits (77), Expect(5) = 8e-063
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -2 / +3
Query: 614 CGCWPPPTARRE 579
CGCWPPPT+RRE
Sbjct: 327 CGCWPPPTSRRE 362
Score = 33.1 bits (66), Expect(4) = 4e-074
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1 / -3
Query: 886 GVQPHRPWNRLDSSPAF 936
GVQPHRP NRL+ P F
Sbjct: 55 GVQPHRPRNRLNPGPPF 5
Score = 24.9 bits (48), Expect(5) = 8e-063
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3 / +1
Query: 742 ELRSVAGGPGRCRDAGP 692
ELR VA GPG AGP
Sbjct: 199 ELRGVAVGPGGSGAAGP 249
>gb|CL159656.1|CL159656 104_349_10804417_116_31382_241 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10804417, DNA
sequence
Length = 659
Score = 240 bits (519), Expect(3) = 2e-098
Identities = 96/107 (89%), Positives = 100/107 (93%)
Frame = -1 / -3
Query: 1062 EHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPS 883
E RLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPS
Sbjct: 384 ERRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPS 205
Query: 882 GKQLLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTGIQTAQADVEV 742
GKQLLQWP+EEVEALR K+VTL+NRVIK G HVEVTGIQTAQ + V
Sbjct: 204 GKQLLQWPVEEVEALRGKAVTLKNRVIKPGQHVEVTGIQTAQVSIIV 64
Score = 191 bits (412), Expect(3) = 6e-072
Identities = 86/102 (84%), Positives = 88/102 (86%)
Frame = +2 / +2
Query: 734 SKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLGI 913
+K T CAVCIPVTST CP LITLFLRVT LSASTSS GHCSSCFPLGSSHTVLGI
Sbjct: 56 NKHTIMLTCAVCIPVTSTCCPGLITLFLRVTALPLSASTSSTGHCSSCFPLGSSHTVLGI 235
Query: 914 AWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1039
A IPA PLATSSAAVSDSLAQPHR+RRR AGS*NVLDA*KLP
Sbjct: 236 A*IPAHPLATSSAAVSDSLAQPHRIRRRFAGS*NVLDA*KLP 361
Score = 109 bits (232), Expect(3) = 2e-098
Identities = 45/55 (81%), Positives = 46/55 (83%)
Frame = -1 / -3
Query: 1224 GGAPRAGLETSVPPGPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDE 1060
G R GLETSVP G RVKHVLKNSLDLRRYDYYTVGTY AERYVPDDPAGD+
Sbjct: 555 GRRRRVGLETSVPSGARVKHVLKNSLDLRRYDYYTVGTYDRDAERYVPDDPAGDD 391
Score = 90.0 bits (190), Expect(3) = 1e-032
Identities = 34/45 (75%), Positives = 35/45 (77%)
Frame = -2 / -1
Query: 995 GAASCGAGLTSPTPPPTMWLKAGLESRRFQGRCGWTPVGSSCCSG 861
G SCGAG TSPTPPPTM K G RRF+GRCGWTP GSSCCSG
Sbjct: 317 GGGSCGAGPTSPTPPPTMSPKGGPGFRRFRGRCGWTPAGSSCCSG 183
Score = 73.0 bits (153), Expect(3) = 6e-072
Identities = 34/53 (64%), Positives = 34/53 (64%)
Frame = +2 / +2
Query: 1067 PAGSSGTYRSALGWYVPTVXXXXXXXXXLFLSTCLTLGPGGTDVSSPARGAPP 1225
PAGSSGTYRSA YVPTV LFLSTC TL P GTDVSSP R P
Sbjct: 398 PAGSSGTYRSASRSYVPTV**SYRRRSRLFLSTCFTLAPDGTDVSSPTRRRRP 556
Score = 68.4 bits (143), Expect(2) = 5e-022
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = +1 / +1
Query: 886 GVQPHRPWNRLDSSPAFSHIVGGGVGLVSPAPQDAAP 996
GVQPHRP NRL+ P F IVGGGVGLV PAPQD P
Sbjct: 208 GVQPHRPRNRLNPGPPFGDIVGGGVGLVGPAPQDPPP 318
Score = 58.8 bits (122), Expect(2) = 5e-022
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +1 / +1
Query: 739 AHLHVSLCRLYPGHLDVMSCLDYPVPESDRLCS 837
AH + LC LYPGHLDV+S LDYPV ESDRL S
Sbjct: 61 AHNNAHLCCLYPGHLDVLSWLDYPVLESDRLAS 159
Score = 52.4 bits (108), Expect(3) = 1e-032
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -3 / -2
Query: 1177 KGQARAQEQPRPPAVRLLHRGHVPP 1103
KG+ARAQEQPRP AVRLLHR HV P
Sbjct: 508 KGEARAQEQPRPAAVRLLHRRHVRP 434
Score = 52.4 bits (108), Expect(3) = 2e-098
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -1 / -3
Query: 1284 PLHSAPTGMWECPDFYPVS 1228
PLHSA TGMWECPDFYPVS
Sbjct: 624 PLHSAATGMWECPDFYPVS 568
Score = 48.7 bits (100), Expect(3) = 6e-072
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +2 / +2
Query: 1211 RGAPPLLTG*KSGHSHIPVGAECSG 1285
R + LLTG*KSGHSHIPV AECSG
Sbjct: 551 RPSSSLLTG*KSGHSHIPVAAECSG 625
Score = 38.6 bits (78), Expect(3) = 1e-032
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -2 / -1
Query: 812 TG*SRQDITSR*PGYKRHR 756
TG*S QD TSR*PGYK+HR
Sbjct: 134 TG*SSQDSTSR*PGYKQHR 78
>gb|CN135740.1|CN135740 OX1_38_E07.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_38_E07_A002 5', mRNA sequence
Length = 759
Score = 255 bits (551), Expect(5) = 1e-095
Identities = 98/131 (74%), Positives = 111/131 (84%)
Frame = -1 / +2
Query: 1170 KHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFYDPAKRR 991
K+VL+NSLDL RYDYYT+G+Y R +RY PD+P GD HRLRYDYGNFYASKTFYDPAKRR
Sbjct: 365 KYVLRNSLDLTRYDYYTIGSYDKRKDRYYPDNPNGDYHRLRYDYGNFYASKTFYDPAKRR 544
Query: 990 RILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLRN 811
R+L GWANESD+ DD AKGWAGI AIPR +WLDPSGKQLLQWPIEEVE LR K+VT+
Sbjct: 545 RVLLGWANESDSVPDDQAKGWAGIHAIPRKIWLDPSGKQLLQWPIEEVEKLRGKAVTVGG 724
Query: 810 RVIKAGHHVEV 778
+V+K G H EV
Sbjct: 725 KVVKPGEHFEV 757
Score = 149 bits (319), Expect(5) = 2e-053
Identities = 78/132 (59%), Positives = 81/132 (61%)
Frame = +2 / -1
Query: 776 VTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLGIAWIPAQPLATSSAA 955
VTS P TL VT F LS STSS+GHCSSCFPLGSS LGIAW+PA PLA SS
Sbjct: 759 VTSKCSPGFTTLPPTVTAFPLSFSTSSMGHCSSCFPLGSSQIFLGIAWMPAHPLAWSSGT 580
Query: 956 VSDSLAQPHRMRRRLAGS*NVLDA*KLPXXXXXXXXXPAGSSGTYRSALGWYVPTVXXXX 1135
+SDSLA P RRR AGS*NVLDA*KLP P G SG YRS L Y P V
Sbjct: 579 LSDSLAHPRSTRRRFAGS*NVLDA*KLP*SYRSRW*SPFGLSG*YRSFLLSYDPMV**SY 400
Query: 1136 XXXXXLFLSTCL 1171
LFLST L
Sbjct: 399 RVRSRLFLSTYL 364
Score = 56.5 bits (117), Expect(5) = 1e-095
Identities = 22/39 (56%), Positives = 24/39 (61%)
Frame = -1 / +2
Query: 1344 RGVAYVYXXXXXXXXXXXXRPLHSAPTGMWECPDFYPVS 1228
RG+A VY PLHSA TGMWECPDF+PVS
Sbjct: 203 RGMAIVYRSRDFRRWTKAKHPLHSALTGMWECPDFFPVS 319
Score = 48.3 bits (99), Expect(5) = 2e-053
Identities = 21/38 (55%), Positives = 21/38 (55%)
Frame = +2 / -1
Query: 1232 TG*KSGHSHIPVGAECSGXXXXXXXXXXXXXYTYATPR 1345
TG KSGHSHIPV AECSG YT A PR
Sbjct: 315 TGKKSGHSHIPVSAECSGCLAFVQRRKSRLRYTIAMPR 202
Score = 47.8 bits (98), Expect(5) = 1e-095
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = -1 / +2
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVS 1510
G P I+YTG++ PDINYQV+ +A+P N +
Sbjct: 41 GTPAILYTGINRPDINYQVQVLAFPNNAT 127
Score = 35.9 bits (72), Expect(5) = 1e-095
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1 / +2
Query: 1638 YGCWSGSATVLPDG 1597
YGCWSGSAT+L DG
Sbjct: 2 YGCWSGSATMLQDG 43
Score = 34.1 bits (68), Expect(5) = 1e-095
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1 / +2
Query: 1443 NVTQFRDPTTAWRGPG 1396
N TQFRDPTTAW G
Sbjct: 119 NATQFRDPTTAWYADG 166
Score = 31.8 bits (63), Expect(5) = 2e-053
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2 / -1
Query: 1397 PGPRQAVVGSRNCVTLMPPSGTMT 1468
P AVVGSRNCV L+ + T T
Sbjct: 165 PSAYHAVVGSRNCVALLGKASTCT 94
Score = 29.5 bits (58), Expect(5) = 2e-053
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPY 1639
PS S VA+PDQQPY
Sbjct: 42 PSCSIVAEPDQQPY 1
Score = 28.1 bits (55), Expect(5) = 2e-053
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2 / -1
Query: 1523 GYATFRTW*LMSGWSTPVYMITGPP 1597
G A+ TW*LMSG PV I G P
Sbjct: 114 GKASTCTW*LMSGRLIPV*RIAGVP 40
>gb|CW276976.1|CW276976 104_750_11405776_148_35399_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405776, DNA
sequence
Length = 530
Score = 240 bits (518), Expect(3) = 4e-091
Identities = 95/105 (90%), Positives = 99/105 (94%)
Frame = -1 / -1
Query: 1062 EHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPS 883
E RLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPS
Sbjct: 320 ERRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPS 141
Query: 882 GKQLLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTGIQTAQADV 748
GKQLLQWP+EEVEALR K+VTL+NRVIK G HVEVTGIQTAQ +
Sbjct: 140 GKQLLQWPVEEVEALRGKAVTLKNRVIKPGQHVEVTGIQTAQVSI 6
Score = 190 bits (409), Expect(3) = 5e-064
Identities = 84/94 (89%), Positives = 85/94 (90%)
Frame = +2 / +1
Query: 758 CAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLGIAWIPAQPL 937
CAVCIPVTST CP LITLFLRVT LSASTSS GHCSSCFPLGSSHTVLGIA IPA PL
Sbjct: 16 CAVCIPVTSTCCPGLITLFLRVTALPLSASTSSTGHCSSCFPLGSSHTVLGIA*IPAHPL 195
Query: 938 ATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1039
ATSSAAVSDSLAQPHR+RRR AGS*NVLDA*KLP
Sbjct: 196 ATSSAAVSDSLAQPHRIRRRFAGS*NVLDA*KLP 297
Score = 109 bits (232), Expect(3) = 4e-091
Identities = 45/55 (81%), Positives = 46/55 (83%)
Frame = -1 / -1
Query: 1224 GGAPRAGLETSVPPGPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDE 1060
G R GLETSVP G RVKHVLKNSLDLRRYDYYTVGTY AERYVPDDPAGD+
Sbjct: 491 GRRRRVGLETSVPSGARVKHVLKNSLDLRRYDYYTVGTYDRDAERYVPDDPAGDD 327
Score = 90.0 bits (190), Expect(3) = 1e-032
Identities = 34/45 (75%), Positives = 35/45 (77%)
Frame = -2 / -2
Query: 995 GAASCGAGLTSPTPPPTMWLKAGLESRRFQGRCGWTPVGSSCCSG 861
G SCGAG TSPTPPPTM K G RRF+GRCGWTP GSSCCSG
Sbjct: 253 GGGSCGAGPTSPTPPPTMSPKGGPGFRRFRGRCGWTPAGSSCCSG 119
Score = 73.0 bits (153), Expect(3) = 5e-064
Identities = 34/53 (64%), Positives = 34/53 (64%)
Frame = +2 / +1
Query: 1067 PAGSSGTYRSALGWYVPTVXXXXXXXXXLFLSTCLTLGPGGTDVSSPARGAPP 1225
PAGSSGTYRSA YVPTV LFLSTC TL P GTDVSSP R P
Sbjct: 334 PAGSSGTYRSASRSYVPTV**SYRRRSRLFLSTCFTLAPDGTDVSSPTRRRRP 492
Score = 68.4 bits (143), Expect(2) = 8e-021
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = +1 / +3
Query: 886 GVQPHRPWNRLDSSPAFSHIVGGGVGLVSPAPQDAAP 996
GVQPHRP NRL+ P F IVGGGVGLV PAPQD P
Sbjct: 144 GVQPHRPRNRLNPGPPFGDIVGGGVGLVGPAPQDPPP 254
Score = 54.7 bits (113), Expect(2) = 8e-021
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = +1 / +3
Query: 757 LCRLYPGHLDVMSCLDYPVPESDRLCS 837
LC LYPGHLDV+S LDYPV ESDRL S
Sbjct: 15 LCCLYPGHLDVLSWLDYPVLESDRLAS 95
Score = 52.4 bits (108), Expect(3) = 1e-032
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -3 / -3
Query: 1177 KGQARAQEQPRPPAVRLLHRGHVPP 1103
KG+ARAQEQPRP AVRLLHR HV P
Sbjct: 444 KGEARAQEQPRPAAVRLLHRRHVRP 370
Score = 38.6 bits (78), Expect(3) = 1e-032
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -2 / -2
Query: 812 TG*SRQDITSR*PGYKRHR 756
TG*S QD TSR*PGYK+HR
Sbjct: 70 TG*SSQDSTSR*PGYKQHR 14
Score = 28.1 bits (55), Expect(3) = 4e-091
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 1254 ECPDFYPVS 1228
ECPDFYPVS
Sbjct: 530 ECPDFYPVS 504
Score = 23.5 bits (45), Expect(3) = 5e-064
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 1211 RGAPPLLTG*KSGH 1252
R + LLTG*KSGH
Sbjct: 487 RPSSSLLTG*KSGH 528
>gb|CN127871.1|CN127871 RHOH1_25_C09.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_25_C09_A002 5', mRNA sequence
Length = 744
Score = 243 bits (525), Expect(3) = 3e-089
Identities = 89/108 (82%), Positives = 98/108 (90%)
Frame = -1 / +3
Query: 1920 YKDLEAEAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKG 1741
++ LEAEAAAA VP SIV+PLLRTGYHFQPP NWINDPNAPMYYKGWYH FYQYNPKG
Sbjct: 123 HRSLEAEAAAAPPSVPASIVSPLLRTGYHFQPPMNWINDPNAPMYYKGWYHLFYQYNPKG 302
Query: 1740 AVWGNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AVWGNI+WAHS+SRDLINW+ALEPA+ PSIP D+YGCWSGSAT+L DG
Sbjct: 303 AVWGNIMWAHSISRDLINWIALEPAIYPSIPSDQYGCWSGSATMLQDG 446
Score = 183 bits (395), Expect(4) = 8e-065
Identities = 76/94 (80%), Positives = 81/94 (86%)
Frame = +2 / -3
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PS S VA+PDQQPY S GMLG AGSSA QLMRSRD E AH MLPHTAPLGLYW* + YH
Sbjct: 445 PSCSIVAEPDQQPYWSEGMLG*MAGSSAIQLMRSRDME*AHMMLPHTAPLGLYW*NR*YH 266
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 1879
PL*Y+GALGSLIQF+GGWKWYPVLSRGLTM+ GT
Sbjct: 265 PL*YIGALGSLIQFIGGWKWYPVLSRGLTMEAGT 164
Score = 121 bits (258), Expect(2) = 6e-038
Identities = 55/95 (57%), Positives = 63/95 (66%)
Frame = -3 / +2
Query: 1912 PRSRGCCGDGPGAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRM 1733
P RG G GA +H QPPAQD VP PA ELDQ QR+ VLQG+V +LP+Q QGR M
Sbjct: 131 PGGRGGGGTAVGAGLHCQPPAQDRVPFPAANELDQRPQRSDVLQGMVSPVLPVQPQGRSM 310
Query: 1732 GQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 1628
GQH VG+L + RPHQL A A +HP R VRLL
Sbjct: 311 GQHHVGSLHITRPHQLDRAGARHLPEHPLRPVRLL 415
Score = 108 bits (230), Expect = 4e-022
Identities = 53/105 (50%), Positives = 62/105 (59%)
Frame = +1 / -2
Query: 1606 QHRRRPGPAAVPVARDAWSERRL*RHPVDEVSRHRVRPHDVAPYGALGIXXXXXXXXXXX 1785
QHRRR PAAV V DA + L R PVDEV+ + V PHDVAPY ALG+
Sbjct: 437 QHRRRARPAAVLVGGDARVDGGLQRDPVDEVA*YGVSPHDVAPYCALGVVLVEQVIPSLV 258
Query: 1786 XHGRVGIIDPVLGGLEVVPRPEQGVDDGRRHLVRRRSSLGFEVLV 1920
H VG++DPV LE+VP PEQG D+G RH R R LG + V
Sbjct: 257 VHRSVGVVDPVHWRLEMVPCPEQGADNGGRHRRRCRRRLGLQAPV 123
Score = 75.8 bits (159), Expect(3) = 3e-089
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = -1 / +3
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLREWVKPS 1477
G P I+YTG++ PDINYQV+ +A+PKN SDPLLREW KP+
Sbjct: 444 GTPAILYTGINRPDINYQVQVLAFPKNASDPLLREWEKPA 563
Score = 59.7 bits (124), Expect(2) = 6e-038
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = -3 / +2
Query: 1579 VHGRGPPGHQLPGPERGVPEERVGPAAPGVGEA 1481
+H PPGHQLPG +P+ERVGPAAPGVGEA
Sbjct: 461 LHWDQPPGHQLPGAGARLPQERVGPAAPGVGEA 559
Score = 55.6 bits (115), Expect(4) = 8e-065
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +2 / -3
Query: 1481 GFTHSRSSGSDTFFGYATFRTW*LMSGWSTPVYMITGPP 1597
GF+HSRSSGSD F G A+ TW*LMSG PV I G P
Sbjct: 559 GFSHSRSSGSDAFLGKASTCTW*LMSGRLIPV*RIAGVP 443
Score = 52.4 bits (108), Expect(3) = 3e-089
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -1 / +3
Query: 1479 SHNPVIVPEGGINVTQFRDPTTAWRGPG 1396
++NPV P GGIN TQFRDPTTAW G
Sbjct: 564 AYNPVAAPVGGINATQFRDPTTAWYADG 647
Score = 46.0 bits (94), Expect(4) = 8e-065
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +2 / -3
Query: 1397 PGPRQAVVGSRNCVTLMPPSGTMTGL 1474
P AVVGSRNCV LMPP+G TGL
Sbjct: 646 PSAYHAVVGSRNCVALMPPTGAATGL 569
Score = 22.1 bits (42), Expect(4) = 8e-065
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / -3
Query: 1928 TTCDAPASCNSSS 1966
TT +APASC++ S
Sbjct: 118 TTWEAPASCSAVS 80
>gb|CD228117.1|CD228117 CCC1_5_A09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_5_A09_A007 5', mRNA sequence
Length = 608
Score = 226 bits (488), Expect(3) = 3e-084
Identities = 81/93 (87%), Positives = 87/93 (93%)
Frame = -1 / +3
Query: 1875 PPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRD 1696
P SIV+PLLRTGYHFQPP NWINDPNAPMYYKGWYH FYQYNPKGAVWGNIVWAHS+SRD
Sbjct: 9 PASIVSPLLRTGYHFQPPMNWINDPNAPMYYKGWYHLFYQYNPKGAVWGNIVWAHSISRD 188
Query: 1695 LINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
LINW+ALEPA+ PSIP D+YGCWSGSAT+L DG
Sbjct: 189 LINWIALEPAIYPSIPSDQYGCWSGSATMLQDG 287
Score = 184 bits (396), Expect(3) = 9e-064
Identities = 76/93 (81%), Positives = 81/93 (87%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PS S VA+PDQQPY S GMLG AGSSA QLMRSRD E AHTMLPHTAPLGLYW* + YH
Sbjct: 286 PSCSIVAEPDQQPYWSEGMLG*MAGSSAIQLMRSRDME*AHTMLPHTAPLGLYW*NR*YH 107
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGG 1876
PL*Y+GALGSLIQF+GGWKWYPVLSRGLTM+ G
Sbjct: 106 PL*YIGALGSLIQFIGGWKWYPVLSRGLTMEAG 8
Score = 117 bits (250), Expect(2) = 7e-037
Identities = 52/84 (61%), Positives = 60/84 (71%)
Frame = -3 / +2
Query: 1879 GAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRMGQHRVGALGVA 1700
GA +H QPPAQD VP PA ELDQ QR+ VLQG+V +LP+Q QGR MGQHRVG+L +
Sbjct: 5 GAGLHCQPPAQDRVPFPATNELDQRPQRSDVLQGMVSPVLPVQPQGRSMGQHRVGSLHIT 184
Query: 1699 RPHQLGGARAGAQTKHPGRQVRLL 1628
RPHQL A A +HP R VRLL
Sbjct: 185 RPHQLDRAGARHLPEHPLRPVRLL 256
Score = 75.8 bits (159), Expect(3) = 3e-084
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = -1 / +3
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLREWVKPS 1477
G P I+YTG++ PDINYQV+ +A+PKN SDPLLREW KP+
Sbjct: 285 GTPAILYTGINRPDINYQVQVLAFPKNASDPLLREWEKPA 404
Score = 59.7 bits (124), Expect(2) = 7e-037
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = -3 / +2
Query: 1579 VHGRGPPGHQLPGPERGVPEERVGPAAPGVGEA 1481
+H PPGHQLPG +P+ERVGPAAPGVGEA
Sbjct: 302 LHWDQPPGHQLPGAGARLPQERVGPAAPGVGEA 400
Score = 55.6 bits (115), Expect(3) = 9e-064
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +2 / -2
Query: 1481 GFTHSRSSGSDTFFGYATFRTW*LMSGWSTPVYMITGPP 1597
GF+HSRSSGSD F G A+ TW*LMSG PV I G P
Sbjct: 400 GFSHSRSSGSDAFLGKASTCTW*LMSGRLIPV*RIAGVP 284
Score = 52.4 bits (108), Expect(3) = 3e-084
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -1 / +3
Query: 1479 SHNPVIVPEGGINVTQFRDPTTAWRGPG 1396
++NPV P GGIN TQFRDPTTAW G
Sbjct: 405 AYNPVAAPVGGINATQFRDPTTAWYADG 488
Score = 46.0 bits (94), Expect(3) = 9e-064
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +2 / -2
Query: 1397 PGPRQAVVGSRNCVTLMPPSGTMTGL 1474
P AVVGSRNCV LMPP+G TGL
Sbjct: 487 PSAYHAVVGSRNCVALMPPTGAATGL 410
>gb|CD227732.1|CD227732 CCC1_53_H10.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_53_H10_A007 5', mRNA sequence
Length = 640
Score = 244 bits (528), Expect(3) = 4e-084
Identities = 90/108 (83%), Positives = 98/108 (90%)
Frame = -1 / +1
Query: 1920 YKDLEAEAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKG 1741
++ LEAEAAAA VP SIV+PLLRTGYHFQPP NWINDPNAPMYYKGWYH FYQYNPKG
Sbjct: 145 HRSLEAEAAAAPPSVPASIVSPLLRTGYHFQPPMNWINDPNAPMYYKGWYHLFYQYNPKG 324
Query: 1740 AVWGNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AVWGNIVWAHS+SRDLINW+ALEPA+ PSIP D+YGCWSGSAT+L DG
Sbjct: 325 AVWGNIVWAHSISRDLINWIALEPAIYPSIPSDQYGCWSGSATMLQDG 468
Score = 186 bits (401), Expect(4) = 4e-062
Identities = 77/94 (81%), Positives = 82/94 (87%)
Frame = +2 / -3
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PS S VA+PDQQPY S GMLG AGSSA QLMRSRD E AHTMLPHTAPLGLYW* + YH
Sbjct: 467 PSCSIVAEPDQQPYWSEGMLG*MAGSSAIQLMRSRDME*AHTMLPHTAPLGLYW*NR*YH 288
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 1879
PL*Y+GALGSLIQF+GGWKWYPVLSRGLTM+ GT
Sbjct: 287 PL*YIGALGSLIQFIGGWKWYPVLSRGLTMEAGT 186
Score = 123 bits (263), Expect(2) = 1e-038
Identities = 56/95 (58%), Positives = 64/95 (67%)
Frame = -3 / +3
Query: 1912 PRSRGCCGDGPGAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRM 1733
P RG G GA +H QPPAQD VP PA ELDQ QR+ VLQG+V +LP+Q QGR M
Sbjct: 153 PGGRGGGGTAVGAGLHCQPPAQDRVPFPATNELDQRPQRSDVLQGMVSPVLPVQPQGRSM 332
Query: 1732 GQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 1628
GQHRVG+L + RPHQL A A +HP R VRLL
Sbjct: 333 GQHRVGSLHITRPHQLDRAGARHLPEHPLRPVRLL 437
Score = 108 bits (230), Expect = 4e-022
Identities = 53/105 (50%), Positives = 62/105 (59%)
Frame = +1 / -2
Query: 1606 QHRRRPGPAAVPVARDAWSERRL*RHPVDEVSRHRVRPHDVAPYGALGIXXXXXXXXXXX 1785
QHRRR PAAV V DA + L R PVDEV+ + V PHDVAPY ALG+
Sbjct: 459 QHRRRARPAAVLVGGDARVDGGLQRDPVDEVA*YGVSPHDVAPYCALGVVLVEQVIPSLV 280
Query: 1786 XHGRVGIIDPVLGGLEVVPRPEQGVDDGRRHLVRRRSSLGFEVLV 1920
H VG++DPV LE+VP PEQG D+G RH R R LG + V
Sbjct: 279 VHRSVGVVDPVHWWLEMVPCPEQGADNGGRHRRRCRRRLGLQAPV 145
Score = 75.8 bits (159), Expect(3) = 4e-084
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLREWVKPS 1477
G P I+YTG++ PDINYQV+ +A+PKN SDPLLREW KP+
Sbjct: 466 GTPAILYTGINRPDINYQVQVLAFPKNASDPLLREWEKPA 585
Score = 59.7 bits (124), Expect(2) = 1e-038
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = -3 / +3
Query: 1579 VHGRGPPGHQLPGPERGVPEERVGPAAPGVGEA 1481
+H PPGHQLPG +P+ERVGPAAPGVGEA
Sbjct: 483 LHWDQPPGHQLPGAGARLPQERVGPAAPGVGEA 581
Score = 55.6 bits (115), Expect(4) = 4e-062
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +2 / -3
Query: 1481 GFTHSRSSGSDTFFGYATFRTW*LMSGWSTPVYMITGPP 1597
GF+HSRSSGSD F G A+ TW*LMSG PV I G P
Sbjct: 581 GFSHSRSSGSDAFLGKASTCTW*LMSGRLIPV*RIAGVP 465
Score = 34.1 bits (68), Expect(4) = 4e-062
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 1427 RNCVTLMPPSGTMTGL 1474
RNCV LMPP+G TGL
Sbjct: 638 RNCVALMPPTGAATGL 591
Score = 33.6 bits (67), Expect(3) = 4e-084
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1 / +1
Query: 1479 SHNPVIVPEGGINVTQFR 1426
++NPV P GGIN TQFR
Sbjct: 586 AYNPVAAPVGGINATQFR 639
Score = 22.1 bits (42), Expect(4) = 4e-062
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / -3
Query: 1928 TTCDAPASCNSSS 1966
TT +APASC++ S
Sbjct: 140 TTWEAPASCSAVS 102
>gb|CD227907.1|CD227907 CCC1_56_C12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_56_C12_A007 5', mRNA sequence
Length = 640
Score = 243 bits (524), Expect(3) = 1e-083
Identities = 89/108 (82%), Positives = 98/108 (90%)
Frame = -1 / +1
Query: 1920 YKDLEAEAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKG 1741
++ LEAEAAAA VP SIV+PLLRTGYHFQPP NWINDPNAPMYYKGWYH FYQYNP+G
Sbjct: 145 HRSLEAEAAAAPPSVPASIVSPLLRTGYHFQPPMNWINDPNAPMYYKGWYHLFYQYNPEG 324
Query: 1740 AVWGNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AVWGNIVWAHS+SRDLINW+ALEPA+ PSIP D+YGCWSGSAT+L DG
Sbjct: 325 AVWGNIVWAHSISRDLINWIALEPAIYPSIPSDQYGCWSGSATMLQDG 468
Score = 183 bits (395), Expect(4) = 3e-061
Identities = 76/94 (80%), Positives = 81/94 (86%)
Frame = +2 / -3
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PS S VA+PDQQPY S GMLG AGSSA QLMRSRD E AHTMLPHTAP GLYW* + YH
Sbjct: 467 PSCSIVAEPDQQPYWSEGMLG*MAGSSAIQLMRSRDME*AHTMLPHTAPSGLYW*NR*YH 288
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 1879
PL*Y+GALGSLIQF+GGWKWYPVLSRGLTM+ GT
Sbjct: 287 PL*YIGALGSLIQFIGGWKWYPVLSRGLTMEAGT 186
Score = 121 bits (259), Expect(2) = 4e-038
Identities = 55/95 (57%), Positives = 64/95 (67%)
Frame = -3 / +3
Query: 1912 PRSRGCCGDGPGAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRM 1733
P RG G GA +H QPPAQD VP PA ELDQ QR+ VLQG+V +LP+Q +GR M
Sbjct: 153 PGGRGGGGTAVGAGLHCQPPAQDRVPFPATNELDQRPQRSDVLQGMVSPVLPVQPRGRSM 332
Query: 1732 GQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 1628
GQHRVG+L + RPHQL A A +HP R VRLL
Sbjct: 333 GQHRVGSLHITRPHQLDRAGARHLPEHPLRPVRLL 437
Score = 108 bits (230), Expect = 4e-022
Identities = 53/105 (50%), Positives = 62/105 (59%)
Frame = +1 / -2
Query: 1606 QHRRRPGPAAVPVARDAWSERRL*RHPVDEVSRHRVRPHDVAPYGALGIXXXXXXXXXXX 1785
QHRRR PAAV V DA + L R PVDEV+ + V PHDVAPY ALG+
Sbjct: 459 QHRRRARPAAVLVGGDARVDGGLQRDPVDEVA*YGVSPHDVAPYCALGVVLVEQVIPSLV 280
Query: 1786 XHGRVGIIDPVLGGLEVVPRPEQGVDDGRRHLVRRRSSLGFEVLV 1920
H VG++DPV LE+VP PEQG D+G RH R R LG + V
Sbjct: 279 VHRSVGVVDPVHWWLEMVPCPEQGADNGGRHRRRCRRRLGLQAPV 145
Score = 75.8 bits (159), Expect(3) = 1e-083
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLREWVKPS 1477
G P I+YTG++ PDINYQV+ +A+PKN SDPLLREW KP+
Sbjct: 466 GTPAILYTGINRPDINYQVQVLAFPKNASDPLLREWEKPA 585
Score = 59.7 bits (124), Expect(2) = 4e-038
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = -3 / +3
Query: 1579 VHGRGPPGHQLPGPERGVPEERVGPAAPGVGEA 1481
+H PPGHQLPG +P+ERVGPAAPGVGEA
Sbjct: 483 LHWDQPPGHQLPGAGARLPQERVGPAAPGVGEA 581
Score = 55.6 bits (115), Expect(4) = 3e-061
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +2 / -3
Query: 1481 GFTHSRSSGSDTFFGYATFRTW*LMSGWSTPVYMITGPP 1597
GF+HSRSSGSD F G A+ TW*LMSG PV I G P
Sbjct: 581 GFSHSRSSGSDAFLGKASTCTW*LMSGRLIPV*RIAGVP 465
Score = 34.1 bits (68), Expect(4) = 3e-061
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 1427 RNCVTLMPPSGTMTGL 1474
RNCV LMPP+G TGL
Sbjct: 638 RNCVALMPPTGAATGL 591
Score = 33.6 bits (67), Expect(3) = 1e-083
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1 / +1
Query: 1479 SHNPVIVPEGGINVTQFR 1426
++NPV P GGIN TQFR
Sbjct: 586 AYNPVAAPVGGINATQFR 639
Score = 22.1 bits (42), Expect(4) = 3e-061
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / -3
Query: 1928 TTCDAPASCNSSS 1966
TT +APASC++ S
Sbjct: 140 TTWEAPASCSAVS 102
>gb|CF074446.1|CF074446 FE1_24_E03.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_24_E03_A002 5', mRNA sequence
Length = 643
Score = 244 bits (528), Expect(3) = 1e-082
Identities = 90/108 (83%), Positives = 98/108 (90%)
Frame = -1 / +3
Query: 1920 YKDLEAEAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKG 1741
++ LEAEAAAA VP SIV+PLLRTGYHFQPP NWINDPNAPMYYKGWYH FYQYNPKG
Sbjct: 150 HRSLEAEAAAAPPSVPASIVSPLLRTGYHFQPPMNWINDPNAPMYYKGWYHLFYQYNPKG 329
Query: 1740 AVWGNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AVWGNIVWAHS+SRDLINW+ALEPA+ PSIP D+YGCWSGSAT+L DG
Sbjct: 330 AVWGNIVWAHSISRDLINWIALEPAIYPSIPSDQYGCWSGSATMLQDG 473
Score = 186 bits (401), Expect(4) = 1e-061
Identities = 77/94 (81%), Positives = 82/94 (87%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PS S VA+PDQQPY S GMLG AGSSA QLMRSRD E AHTMLPHTAPLGLYW* + YH
Sbjct: 472 PSCSIVAEPDQQPYWSEGMLG*MAGSSAIQLMRSRDME*AHTMLPHTAPLGLYW*NR*YH 293
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 1879
PL*Y+GALGSLIQF+GGWKWYPVLSRGLTM+ GT
Sbjct: 292 PL*YIGALGSLIQFIGGWKWYPVLSRGLTMEAGT 191
Score = 123 bits (263), Expect(2) = 3e-037
Identities = 56/95 (58%), Positives = 64/95 (67%)
Frame = -3 / +2
Query: 1912 PRSRGCCGDGPGAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRM 1733
P RG G GA +H QPPAQD VP PA ELDQ QR+ VLQG+V +LP+Q QGR M
Sbjct: 158 PGGRGGGGTAVGAGLHCQPPAQDRVPFPAANELDQRPQRSDVLQGMVSPVLPVQPQGRSM 337
Query: 1732 GQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 1628
GQHRVG+L + RPHQL A A +HP R VRLL
Sbjct: 338 GQHRVGSLHITRPHQLDRAGARHLPEHPLRPVRLL 442
Score = 108 bits (230), Expect = 4e-022
Identities = 53/105 (50%), Positives = 62/105 (59%)
Frame = +1 / -3
Query: 1606 QHRRRPGPAAVPVARDAWSERRL*RHPVDEVSRHRVRPHDVAPYGALGIXXXXXXXXXXX 1785
QHRRR PAAV V DA + L R PVDEV+ + V PHDVAPY ALG+
Sbjct: 464 QHRRRARPAAVLVGGDARVDGGLQRDPVDEVA*YGVSPHDVAPYCALGVVLVEQVIPSLV 285
Query: 1786 XHGRVGIIDPVLGGLEVVPRPEQGVDDGRRHLVRRRSSLGFEVLV 1920
H VG++DPV LE+VP PEQG D+G RH R R LG + V
Sbjct: 284 VHRSVGVVDPVHWRLEMVPCPEQGADNGGRHRRRCRRRLGLQAPV 150
Score = 75.8 bits (159), Expect(3) = 1e-082
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = -1 / +3
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLREWVKPS 1477
G P I+YTG++ PDINYQV+ +A+PKN SDPLLREW KP+
Sbjct: 471 GTPAILYTGINRPDINYQVQVLAFPKNASDPLLREWEKPA 590
Score = 55.6 bits (115), Expect(4) = 1e-061
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +2 / -1
Query: 1481 GFTHSRSSGSDTFFGYATFRTW*LMSGWSTPVYMITGPP 1597
GF+HSRSSGSD F G A+ TW*LMSG PV I G P
Sbjct: 586 GFSHSRSSGSDAFLGKASTCTW*LMSGRLIPV*RIAGVP 470
Score = 55.1 bits (114), Expect(2) = 3e-037
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = -3 / +2
Query: 1579 VHGRGPPGHQLPGPERGVPEERVGPAAPGVGEA 1481
+H PPGHQLPG +P+ERV PAAPGVGEA
Sbjct: 488 LHWDQPPGHQLPGAGARLPQERV*PAAPGVGEA 586
Score = 32.2 bits (64), Expect(4) = 1e-061
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 1427 RNCVTLMPPSGTMTGL 1474
RNCV LMPP+G +GL
Sbjct: 643 RNCVALMPPTGAASGL 596
Score = 28.6 bits (56), Expect(3) = 1e-082
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / +3
Query: 1479 SHNPVIVPEGGINVTQF 1429
++NP P GGIN TQF
Sbjct: 591 AYNPEAAPVGGINATQF 641
Score = 22.1 bits (42), Expect(4) = 1e-061
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / -1
Query: 1928 TTCDAPASCNSSS 1966
TT +APASC++ S
Sbjct: 145 TTWEAPASCSAVS 107
>gb|CW276975.1|CW276975 104_750_11405776_116_35395_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405776, DNA
sequence
Length = 599
Score = 169 bits (363), Expect(3) = 6e-082
Identities = 59/67 (88%), Positives = 64/67 (95%)
Frame = -1 / +3
Query: 1797 APMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGS 1618
AP YYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW+ALEPA++PSIP D+YGCWSGS
Sbjct: 48 APFYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWMALEPAIKPSIPSDKYGCWSGS 227
Query: 1617 ATVLPDG 1597
AT +PDG
Sbjct: 228 ATTMPDG 248
Score = 143 bits (306), Expect(3) = 6e-082
Identities = 54/64 (84%), Positives = 59/64 (92%)
Frame = -1 / +3
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPT 1417
G PVIMYTG+D P+ NYQV+NVAYP+N SDPLLREWVKPS+NPVIVPEGGIN TQFRDPT
Sbjct: 246 GTPVIMYTGIDRPNTNYQVQNVAYPRNKSDPLLREWVKPSYNPVIVPEGGINATQFRDPT 425
Query: 1416 TAWR 1405
TAWR
Sbjct: 426 TAWR 437
Score = 141 bits (302), Expect(3) = 1e-066
Identities = 57/67 (85%), Positives = 60/67 (89%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PSG VA+PDQQPYLS GMLGL AGS+A QLMRSR+TECAHTMLPHTAPLGLYW*KKWYH
Sbjct: 247 PSGMVVAEPDQQPYLSEGMLGLIAGSNAIQLMRSRETECAHTMLPHTAPLGLYW*KKWYH 68
Query: 1778 PL*YMGA 1798
PL* GA
Sbjct: 67 PL**NGA 47
Score = 119 bits (255), Expect(3) = 1e-066
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = +2 / -2
Query: 1406 RQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW*LMSGWSTPVYMI 1585
RQAVVGSRNCV LMPPSGTMTGL +GFTHSRSSGSD F G ATF TW*L+ G S PVYMI
Sbjct: 436 RQAVVGSRNCVALMPPSGTMTGL*DGFTHSRSSGSDLFRG*ATFWTW*LVLGRSMPVYMI 257
Query: 1586 TGPP 1597
TG P
Sbjct: 256 TGVP 245
Score = 96.8 bits (205), Expect(2) = 4e-037
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = -3 / +2
Query: 1789 VLQGVVPFLLPIQSQGRRMGQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 1628
+LQGVVPFLLP+Q Q R MGQHR+GALG+ RPHQL G RAG Q +HP RQVRLL
Sbjct: 56 LLQGVVPFLLPVQPQRRCMGQHRMGALGLTRPHQLDGIRAGDQAQHPLRQVRLL 217
Score = 81.3 bits (171), Expect(2) = 4e-037
Identities = 34/56 (60%), Positives = 37/56 (66%)
Frame = -3 / +2
Query: 1582 HVHGRGPPGHQLPGPERGVPEERVGPAAPGVGEALAXXXXXXXXXXXRDAVPRPDH 1415
HVH PP HQLPGPER +P E+V PAAPGVGEA+ RDAVPRPDH
Sbjct: 260 HVHRHRPPQHQLPGPERRLPSEQVRPAAPGVGEAVLQPGHRAGRRHQRDAVPRPDH 427
Score = 34.5 bits (69), Expect(3) = 6e-082
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -1 / +3
Query: 1368 SAAGSSPPRGVAYVYXXXXXXXXXXXXRPLHSA 1270
+ ++PPRGVAYVY RPLHSA
Sbjct: 498 TTGATAPPRGVAYVYRSRDFRRWTRVRRPLHSA 596
Score = 34.5 bits (69), Expect(3) = 1e-066
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2 / -2
Query: 1271 AECSGXXXXXXXXXXXXXYTYATPRGG 1351
AECSG YTYATPRGG
Sbjct: 595 AECSGRRTRVHRLKSRLRYTYATPRGG 515
>gb|CD222254.1|CD222254 CCC1_2_E04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_2_E04_A007 5', mRNA sequence
Length = 626
Score = 243 bits (525), Expect(3) = 8e-081
Identities = 89/108 (82%), Positives = 98/108 (90%)
Frame = -1 / +1
Query: 1920 YKDLEAEAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKG 1741
++ LEAEAAAA VP SIV+PLLRTGYHFQPP NWINDPNAPMYYKGWYH FYQYNP+G
Sbjct: 142 HRSLEAEAAAAPPSVPASIVSPLLRTGYHFQPPMNWINDPNAPMYYKGWYHLFYQYNPRG 321
Query: 1740 AVWGNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AVWGNIVWAHS+SRDLINW+ALEPA+ PSIP D+YGCWSGSAT+L DG
Sbjct: 322 AVWGNIVWAHSISRDLINWIALEPAIYPSIPSDQYGCWSGSATMLQDG 465
Score = 186 bits (401), Expect(4) = 2e-059
Identities = 77/94 (81%), Positives = 82/94 (87%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PS S VA+PDQQPY S GMLG AGSSA QLMRSRD E AHTMLPHTAPLGLYW* + YH
Sbjct: 464 PSCSIVAEPDQQPYWSEGMLG*MAGSSAIQLMRSRDME*AHTMLPHTAPLGLYW*NR*YH 285
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 1879
PL*Y+GALGSLIQF+GGWKWYPVLSRGLTM+ GT
Sbjct: 284 PL*YIGALGSLIQFIGGWKWYPVLSRGLTMEAGT 183
Score = 123 bits (263), Expect(2) = 1e-038
Identities = 56/95 (58%), Positives = 64/95 (67%)
Frame = -3 / +3
Query: 1912 PRSRGCCGDGPGAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRM 1733
P RG G GA +H QPPAQD VP PA ELDQ QR+ VLQG+V +LP+Q QGR M
Sbjct: 150 PGGRGGGGTAVGAGLHCQPPAQDRVPFPATNELDQRPQRSDVLQGMVSPVLPVQPQGRSM 329
Query: 1732 GQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 1628
GQHRVG+L + RPHQL A A +HP R VRLL
Sbjct: 330 GQHRVGSLHITRPHQLDRAGARHLPEHPLRPVRLL 434
Score = 105 bits (223), Expect = 3e-021
Identities = 52/105 (49%), Positives = 61/105 (58%)
Frame = +1 / -3
Query: 1606 QHRRRPGPAAVPVARDAWSERRL*RHPVDEVSRHRVRPHDVAPYGALGIXXXXXXXXXXX 1785
QHRRR PAAV V DA + L R PVDEV+ + V PHDVAPY A G+
Sbjct: 456 QHRRRARPAAVLVGGDARVDGGLQRDPVDEVA*YGVSPHDVAPYCAPGVVLVEQVIPSLV 277
Query: 1786 XHGRVGIIDPVLGGLEVVPRPEQGVDDGRRHLVRRRSSLGFEVLV 1920
H VG++DPV LE+VP PEQG D+G RH R R LG + V
Sbjct: 276 VHRSVGVVDPVHWWLEMVPCPEQGADNGGRHRRRCRRRLGLQAPV 142
Score = 75.8 bits (159), Expect(3) = 8e-081
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLREWVKPS 1477
G P I+YTG++ PDINYQV+ +A+PKN SDPLLREW KP+
Sbjct: 463 GTPAILYTGINRPDINYQVQVLAFPKNASDPLLREWEKPA 582
Score = 59.7 bits (124), Expect(2) = 1e-038
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = -3 / +3
Query: 1579 VHGRGPPGHQLPGPERGVPEERVGPAAPGVGEA 1481
+H PPGHQLPG +P+ERVGPAAPGVGEA
Sbjct: 480 LHWDQPPGHQLPGAGARLPQERVGPAAPGVGEA 578
Score = 55.6 bits (115), Expect(4) = 2e-059
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +2 / -1
Query: 1481 GFTHSRSSGSDTFFGYATFRTW*LMSGWSTPVYMITGPP 1597
GF+HSRSSGSD F G A+ TW*LMSG PV I G P
Sbjct: 578 GFSHSRSSGSDAFLGKASTCTW*LMSGRLIPV*RIAGVP 462
Score = 24.9 bits (48), Expect(4) = 2e-059
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / -1
Query: 1436 VTLMPPSGTMTGL 1474
V LMPP+G TGL
Sbjct: 626 VALMPPTGAATGL 588
Score = 24.0 bits (46), Expect(3) = 8e-081
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1 / +1
Query: 1479 SHNPVIVPEGGIN 1441
++NPV P GGIN
Sbjct: 583 AYNPVAAPVGGIN 621
Score = 22.1 bits (42), Expect(4) = 2e-059
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / -1
Query: 1928 TTCDAPASCNSSS 1966
TT +APASC++ S
Sbjct: 137 TTWEAPASCSAVS 99
>gb|CD204377.1|CD204377 HS1_7_F03.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_7_F03_A012 5', mRNA sequence
Length = 602
Score = 244 bits (528), Expect(2) = 5e-076
Identities = 90/108 (83%), Positives = 98/108 (90%)
Frame = -1 / +2
Query: 1920 YKDLEAEAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKG 1741
++ LEAEAAAA VP SIV+PLLRTGYHFQPP NWINDPNAPMYYKGWYH FYQYNPKG
Sbjct: 179 HRSLEAEAAAAPPSVPASIVSPLLRTGYHFQPPMNWINDPNAPMYYKGWYHLFYQYNPKG 358
Query: 1740 AVWGNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AVWGNIVWAHS+SRDLINW+ALEPA+ PSIP D+YGCWSGSAT+L DG
Sbjct: 359 AVWGNIVWAHSISRDLINWIALEPAIYPSIPSDQYGCWSGSATMLQDG 502
Score = 186 bits (401), Expect(3) = 6e-054
Identities = 77/94 (81%), Positives = 82/94 (87%)
Frame = +2 / -3
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PS S VA+PDQQPY S GMLG AGSSA QLMRSRD E AHTMLPHTAPLGLYW* + YH
Sbjct: 501 PSCSIVAEPDQQPYWSEGMLG*MAGSSAIQLMRSRDME*AHTMLPHTAPLGLYW*NR*YH 322
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 1879
PL*Y+GALGSLIQF+GGWKWYPVLSRGLTM+ GT
Sbjct: 321 PL*YIGALGSLIQFIGGWKWYPVLSRGLTMEAGT 220
Score = 123 bits (263), Expect(2) = 3e-035
Identities = 56/95 (58%), Positives = 64/95 (67%)
Frame = -3 / +1
Query: 1912 PRSRGCCGDGPGAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRM 1733
P RG G GA +H QPPAQD VP PA ELDQ QR+ VLQG+V +LP+Q QGR M
Sbjct: 187 PGGRGGGGTAVGAGLHCQPPAQDRVPFPATNELDQRPQRSDVLQGMVSPVLPVQPQGRSM 366
Query: 1732 GQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 1628
GQHRVG+L + RPHQL A A +HP R VRLL
Sbjct: 367 GQHRVGSLHITRPHQLDRAGARHLPEHPLRPVRLL 471
Score = 108 bits (230), Expect = 4e-022
Identities = 53/105 (50%), Positives = 62/105 (59%)
Frame = +1 / -2
Query: 1606 QHRRRPGPAAVPVARDAWSERRL*RHPVDEVSRHRVRPHDVAPYGALGIXXXXXXXXXXX 1785
QHRRR PAAV V DA + L R PVDEV+ + V PHDVAPY ALG+
Sbjct: 493 QHRRRARPAAVLVGGDARVDGGLQRDPVDEVA*YGVSPHDVAPYCALGVVLVEQVIPSLV 314
Query: 1786 XHGRVGIIDPVLGGLEVVPRPEQGVDDGRRHLVRRRSSLGFEVLV 1920
H VG++DPV LE+VP PEQG D+G RH R R LG + V
Sbjct: 313 VHRSVGVVDPVHWWLEMVPCPEQGADNGGRHRRRCRRRLGLQAPV 179
Score = 63.4 bits (132), Expect(2) = 5e-076
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -1 / +2
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLR 1495
G P I+YTG++ PDINYQV+ +A+PKN SDPLLR
Sbjct: 500 GTPAILYTGINRPDINYQVQVLAFPKNASDPLLR 601
Score = 48.3 bits (99), Expect(2) = 3e-035
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -3 / +1
Query: 1579 VHGRGPPGHQLPGPERGVPEERVGPAAP 1496
+H PPGHQLPG +P+ERVGPAAP
Sbjct: 517 LHWDQPPGHQLPGAGARLPQERVGPAAP 600
Score = 44.1 bits (90), Expect(3) = 6e-054
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = +2 / -3
Query: 1496 RSSGSDTFFGYATFRTW*LMSGWSTPVYMITGPP 1597
RSSGSD F G A+ TW*LMSG PV I G P
Sbjct: 600 RSSGSDAFLGKASTCTW*LMSGRLIPV*RIAGVP 499
Score = 22.1 bits (42), Expect(3) = 6e-054
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / -3
Query: 1928 TTCDAPASCNSSS 1966
TT +APASC++ S
Sbjct: 174 TTWEAPASCSAVS 136
>gb|CW394782.1|CW394782 fsbb001f082i17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f082i17, DNA
sequence
Length = 763
Score = 176 bits (378), Expect(4) = 7e-074
Identities = 64/95 (67%), Positives = 79/95 (83%)
Frame = -1 / +1
Query: 1053 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQ 874
LRYDYGNFYASKTF D AK+RRILWGWANESD+ ADD+ KGWAG+QA+PR VWL P GKQ
Sbjct: 250 LRYDYGNFYASKTFLDTAKQRRILWGWANESDSTADDLRKGWAGVQAVPRKVWLAPDGKQ 429
Query: 873 LLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTGI 769
L+QWP+ E+E+LR V + + ++KAG H EV+G+
Sbjct: 430 LVQWPVAEIESLRGNHVNVTDTLVKAGQHFEVSGL 534
Score = 109 bits (232), Expect(4) = 7e-041
Identities = 52/89 (58%), Positives = 59/89 (66%)
Frame = +2 / -3
Query: 773 PVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLGIAWIPAQPLATSSA 952
P TS CPAL ++ + +T S S+ GHC+SC P G+S T LG A PAQPL SSA
Sbjct: 530 PDTSKCCPALTSVSVTLTWLPRRDSISATGHCTSCLPSGASQTFLGTACTPAQPLRRSSA 351
Query: 953 AVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1039
SDSLA PHRMRR A S NVLDA*KLP
Sbjct: 350 VESDSLAHPHRMRRCFAVSRNVLDA*KLP 264
Score = 62.0 bits (129), Expect(4) = 7e-074
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = -1 / +1
Query: 678 DAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFR 562
DAE +C + A+ +GGVGPFGLWVLAS + +ERTA+F +
Sbjct: 625 DAETVCAARGAEAKGGVGPFGLWVLASDDLQERTALFLQ 741
Score = 51.0 bits (105), Expect(4) = 7e-041
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = +2 / -3
Query: 566 KNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 664
+N AV S R ++ASTHSPNGPTPPL SA H
Sbjct: 737 RNRAVRSWRSSDASTHSPNGPTPPLASAPRAAH 639
Score = 50.6 bits (104), Expect(4) = 7e-074
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = -1 / +1
Query: 1170 KHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 1063
KHVLK SLDL R++YYT G Y + YVPD D
Sbjct: 130 KHVLKVSLDLTRFEYYTFGEYDDATDTYVPDAAIAD 237
Score = 49.6 bits (102), Expect(4) = 7e-074
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -1 / +1
Query: 1281 LHSAPTGMWECPDFYPVSKGGAPRAG 1204
LHS TGMWECPDFYPV+ G +G
Sbjct: 40 LHSGDTGMWECPDFYPVNSAGVGVSG 117
Score = 40.5 bits (82), Expect(4) = 7e-041
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / -3
Query: 1205 PARGAPPLLTG*KSGHSHIPVGAECS 1282
P P TG*KSGHSH+PV ECS
Sbjct: 116 PLTPTPAEFTG*KSGHSHMPVSPECS 39
Score = 25.8 bits (50), Expect(4) = 7e-041
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2 / -3
Query: 1076 SSGTYRSALGWYVPTVXXXXXXXXXLFLSTC 1168
+SGTY S Y P V L LSTC
Sbjct: 224 ASGTYVSVASSYSPNV*YSNRVKSRLTLSTC 132
>gb|CF071286.1|CF071286 FE1_16_A06.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_16_A06_A002 5', mRNA sequence
Length = 579
Score = 237 bits (511), Expect(2) = 1e-073
Identities = 87/102 (85%), Positives = 93/102 (91%)
Frame = -1 / +2
Query: 1902 EAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNI 1723
EAAAA VP SIV+PLLRTGYHFQPP NWINDPNAPMYYKGWYH FYQYNPKGAVWGNI
Sbjct: 173 EAAAAPPSVPASIVSPLLRTGYHFQPPMNWINDPNAPMYYKGWYHLFYQYNPKGAVWGNI 352
Query: 1722 VWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
VWAHS+SRDLINW+ALEPA+ PSIP D+YGCWSGSAT+L DG
Sbjct: 353 VWAHSISRDLINWIALEPAIYPSIPSDQYGCWSGSATMLQDG 478
Score = 186 bits (401), Expect(3) = 2e-054
Identities = 77/94 (81%), Positives = 82/94 (87%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PS S VA+PDQQPY S GMLG AGSSA QLMRSRD E AHTMLPHTAPLGLYW* + YH
Sbjct: 477 PSCSIVAEPDQQPYWSEGMLG*MAGSSAIQLMRSRDME*AHTMLPHTAPLGLYW*NR*YH 298
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 1879
PL*Y+GALGSLIQF+GGWKWYPVLSRGLTM+ GT
Sbjct: 297 PL*YIGALGSLIQFIGGWKWYPVLSRGLTMEAGT 196
Score = 118 bits (253), Expect(2) = 1e-034
Identities = 53/88 (60%), Positives = 61/88 (69%)
Frame = -3 / +1
Query: 1891 GDGPGAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRMGQHRVGA 1712
G GA +H QPPAQD VP PA ELDQ QR+ VLQG+V +LP+Q QGR MGQHRVG+
Sbjct: 184 GTAVGAGLHCQPPAQDRVPFPAANELDQRPQRSDVLQGMVSPVLPVQPQGRSMGQHRVGS 363
Query: 1711 LGVARPHQLGGARAGAQTKHPGRQVRLL 1628
L + RPHQL A A +HP R VRLL
Sbjct: 364 LHITRPHQLDRAGARHLPEHPLRPVRLL 447
Score = 104 bits (221), Expect = 6e-021
Identities = 51/99 (51%), Positives = 59/99 (59%)
Frame = +1 / -3
Query: 1606 QHRRRPGPAAVPVARDAWSERRL*RHPVDEVSRHRVRPHDVAPYGALGIXXXXXXXXXXX 1785
QHRRR PAAV V DA + L R PVDEV+ + V PHDVAPY ALG+
Sbjct: 469 QHRRRARPAAVLVGGDARVDGGLQRDPVDEVA*YGVSPHDVAPYCALGVVLVEQVIPSLV 290
Query: 1786 XHGRVGIIDPVLGGLEVVPRPEQGVDDGRRHLVRRRSSL 1902
H VG++DPV LE+VP PEQG D+G RH R R L
Sbjct: 289 VHRSVGVVDPVHWRLEMVPCPEQGADNGGRHRRRCRRRL 173
Score = 63.4 bits (132), Expect(2) = 1e-073
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -1 / +2
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLR 1495
G P I+YTG++ PDINYQV+ +A+PKN SDPLLR
Sbjct: 476 GTPAILYTGINRPDINYQVQVLAFPKNASDPLLR 577
Score = 51.0 bits (105), Expect(2) = 1e-034
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -3 / +1
Query: 1579 VHGRGPPGHQLPGPERGVPEERVGPAAPG 1493
+H PPGHQLPG +P+ERVGPAAPG
Sbjct: 493 LHWDQPPGHQLPGAGARLPQERVGPAAPG 579
Score = 46.0 bits (94), Expect(3) = 2e-054
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = +2 / -1
Query: 1493 SRSSGSDTFFGYATFRTW*LMSGWSTPVYMITGPP 1597
SRSSGSD F G A+ TW*LMSG PV I G P
Sbjct: 579 SRSSGSDAFLGKASTCTW*LMSGRLIPV*RIAGVP 475
Score = 22.1 bits (42), Expect(3) = 2e-054
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / -2
Query: 1928 TTCDAPASCNSSS 1966
TT +APASC++ S
Sbjct: 149 TTWEAPASCSAVS 111
>gb|CW457841.1|CW457841 fsbb001f203n07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f203n07, DNA
sequence
Length = 700
Score = 165 bits (354), Expect(2) = 5e-073
Identities = 58/67 (86%), Positives = 62/67 (92%)
Frame = -1 / -3
Query: 1797 APMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGS 1618
AP+YYKGWYH FYQYNPKGAVWGNIVW HSVSRDLINWVAL+PA+ PSIP D+YGCWSGS
Sbjct: 386 APLYYKGWYHIFYQYNPKGAVWGNIVWGHSVSRDLINWVALKPAIEPSIPSDKYGCWSGS 207
Query: 1617 ATVLPDG 1597
AT LPDG
Sbjct: 206 ATTLPDG 186
Score = 138 bits (297), Expect(2) = 2e-058
Identities = 57/68 (83%), Positives = 58/68 (85%)
Frame = +2 / +1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PSGS VADPDQQPYLS GMLG AG ATQLMRSRDTE HTMLPHTAPLGLYW*K WYH
Sbjct: 187 PSGSVVADPDQQPYLSDGMLGSIAGFRATQLMRSRDTEWPHTMLPHTAPLGLYW*KMWYH 366
Query: 1778 PL*YMGAL 1801
PL*Y GA+
Sbjct: 367 PL*YNGAV 390
Score = 133 bits (284), Expect(2) = 5e-073
Identities = 48/62 (77%), Positives = 56/62 (90%)
Frame = -1 / -3
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPT 1417
G P IMYTGV+ PD+NYQV+N+AYP+N SDPLLREWVKPSHNP+IVP+ G+N TQFRDPT
Sbjct: 188 GTPAIMYTGVNRPDVNYQVQNIAYPRNKSDPLLREWVKPSHNPIIVPKAGVNATQFRDPT 9
Query: 1416 TA 1411
TA
Sbjct: 8 TA 3
Score = 110 bits (235), Expect(2) = 2e-058
Identities = 47/62 (75%), Positives = 47/62 (75%)
Frame = +2 / +1
Query: 1412 AVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW*LMSGWSTPVYMITG 1591
AVVGSRNCV L P GTM GLCEGFTHSRSSGSD F GYA F TW* SG TPVYMI G
Sbjct: 4 AVVGSRNCVALTPALGTMIGLCEGFTHSRSSGSDLFRGYAMFCTW*FTSGRFTPVYMIAG 183
Query: 1592 PP 1597
P
Sbjct: 184 VP 189
Score = 99.1 bits (210), Expect(2) = 1e-035
Identities = 42/54 (77%), Positives = 45/54 (83%)
Frame = -3 / -2
Query: 1789 VLQGVVPFLLPIQSQGRRMGQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 1628
VLQGVVP LLPIQ Q RR+GQHRVG LGVARPHQLGG AG + +HP RQVRLL
Sbjct: 378 VLQGVVPHLLPIQPQRRRVGQHRVGPLGVARPHQLGGPEAGDRAQHPVRQVRLL 217
Score = 73.9 bits (155), Expect(2) = 1e-035
Identities = 33/56 (58%), Positives = 35/56 (62%)
Frame = -3 / -2
Query: 1582 HVHGRGPPGHQLPGPERGVPEERVGPAAPGVGEALAXXXXXXXXXXXRDAVPRPDH 1415
HVHGR P +LPG E VP E+VGPAAPGVGEALA RDAVP P H
Sbjct: 174 HVHGREPSRRELPGAEHRVPSEQVGPAAPGVGEALAQPDHRPQGRRQRDAVPGPHH 7
>gb|CW449570.1|CW449570 fsbb001f183m13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f183m13, DNA
sequence
Length = 602
Score = 169 bits (363), Expect(2) = 9e-073
Identities = 59/67 (88%), Positives = 64/67 (95%)
Frame = -1 / +3
Query: 1797 APMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGS 1618
AP YYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW+ALEPA++PSIP D+YGCWSGS
Sbjct: 222 APFYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWMALEPAIKPSIPSDKYGCWSGS 401
Query: 1617 ATVLPDG 1597
AT +PDG
Sbjct: 402 ATTMPDG 422
Score = 141 bits (302), Expect(2) = 5e-060
Identities = 57/67 (85%), Positives = 60/67 (89%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PSG VA+PDQQPYLS GMLGL AGS+A QLMRSR+TECAHTMLPHTAPLGLYW*KKWYH
Sbjct: 421 PSGMVVAEPDQQPYLSEGMLGLIAGSNAIQLMRSRETECAHTMLPHTAPLGLYW*KKWYH 242
Query: 1778 PL*YMGA 1798
PL* GA
Sbjct: 241 PL**NGA 221
Score = 127 bits (273), Expect(2) = 9e-073
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = -1 / +3
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPT 1417
G PVIMYTG+D P+ NYQV+NVAYP+N SDPLLRE VKPS+NPVIVPEGGIN TQFRDPT
Sbjct: 420 GTPVIMYTGIDRPNTNYQVQNVAYPRNKSDPLLRECVKPSYNPVIVPEGGINATQFRDPT 599
Query: 1416 T 1414
T
Sbjct: 600 T 602
Score = 113 bits (241), Expect(2) = 5e-060
Identities = 49/61 (80%), Positives = 51/61 (83%)
Frame = +2 / -2
Query: 1415 VVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW*LMSGWSTPVYMITGP 1594
VVGSRNCV LMPPSGTMTGL +GFTHSRSSGSD F G ATF TW*L+ G S PVYMITG
Sbjct: 601 VVGSRNCVALMPPSGTMTGL*DGFTHSRSSGSDLFRG*ATFWTW*LVLGRSMPVYMITGV 422
Query: 1595 P 1597
P
Sbjct: 421 P 419
Score = 96.8 bits (205), Expect(2) = 6e-036
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = -3 / +2
Query: 1789 VLQGVVPFLLPIQSQGRRMGQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 1628
+LQGVVPFLLP+Q Q R MGQHR+GALG+ RPHQL G RAG Q +HP RQVRLL
Sbjct: 230 LLQGVVPFLLPVQPQRRCMGQHRMGALGLTRPHQLDGIRAGDQAQHPLRQVRLL 391
Score = 77.1 bits (162), Expect(2) = 6e-036
Identities = 33/56 (58%), Positives = 36/56 (64%)
Frame = -3 / +2
Query: 1582 HVHGRGPPGHQLPGPERGVPEERVGPAAPGVGEALAXXXXXXXXXXXRDAVPRPDH 1415
HVH PP HQLPGPER +P E+V PAAPGV EA+ RDAVPRPDH
Sbjct: 434 HVHRHRPPQHQLPGPERRLPSEQVRPAAPGVCEAVLQPGHRAGRRHQRDAVPRPDH 601
>gb|CW283797.1|CW283797 104_760_11409436_148_35488_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11409436, DNA
sequence
Length = 666
Score = 144 bits (309), Expect(5) = 5e-072
Identities = 53/71 (74%), Positives = 59/71 (83%)
Frame = -1 / -2
Query: 1809 NDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEPALRPSIPGDRYGC 1630
+DPN MYYKG YH FYQYNPKGAVWGNIVWAH+VS DL++WV L PA+ P+ P D GC
Sbjct: 638 SDPNGVMYYKGVYHLFYQYNPKGAVWGNIVWAHAVSTDLVDWVMLPPAIYPTAPFDVNGC 459
Query: 1629 WSGSATVLPDG 1597
WSGSATVLPDG
Sbjct: 458 WSGSATVLPDG 426
Score = 120 bits (256), Expect(3) = 2e-048
Identities = 50/70 (71%), Positives = 54/70 (77%)
Frame = +2 / +1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PSGSTVA+PDQQP S G +G AG S TQ RS DT CAHTMLPHTAPLGLYW* +WY
Sbjct: 427 PSGSTVAEPDQQPLTSNGAVG*IAGGSMTQSTRSVDTACAHTMLPHTAPLGLYW*NRWYT 606
Query: 1778 PL*YMGALGS 1807
PL*Y+ LGS
Sbjct: 607 PL*YITPLGS 636
Score = 100 bits (212), Expect(5) = 5e-072
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -1 / -2
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGP 1399
N QV+NVAYPK++SDP LREWVKP +NPVI P G+N T FRDPTTAW+GP
Sbjct: 389 NRQVQNVAYPKDLSDPYLREWVKPDYNPVIAPGPGMNATAFRDPTTAWQGP 237
Score = 68.0 bits (142), Expect(3) = 2e-048
Identities = 31/55 (56%), Positives = 34/55 (61%)
Frame = +2 / +1
Query: 1379 SRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRT 1543
+R S GP AVVGSRN V +P G MTGL G THSR GS+ GYATF T
Sbjct: 217 TRRQSPSGPCHAVVGSRNAVAFIPGPGAMTGL*SGLTHSRRYGSERSLGYATFCT 381
Score = 54.2 bits (112), Expect(5) = 5e-072
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = -1 / -2
Query: 1344 RGVAYVYXXXXXXXXXXXXRPLHSAPTGMWECPDFYPVSKGGAPRAG 1204
RG+A +Y R LHS TGMWECPDFYPV+ G +G
Sbjct: 194 RGLAMLYRSRDFKRWAPARRALHSGDTGMWECPDFYPVNSAGVGVSG 54
Score = 46.0 bits (94), Expect(3) = 2e-048
Identities = 20/47 (42%), Positives = 22/47 (46%)
Frame = +2 / +1
Query: 1205 PARGAPPLLTG*KSGHSHIPVGAECSGXXXXXXXXXXXXXYTYATPR 1345
P P TG*KSGHSH+PV ECS Y+ A PR
Sbjct: 55 PLTPTPAEFTG*KSGHSHMPVSPECSARRAGAQRLKSLLRYSMARPR 195
Score = 26.3 bits (51), Expect(5) = 5e-072
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -2
Query: 1596 GGPVIMYTGVD 1564
G PVIMYTG+D
Sbjct: 428 GTPVIMYTGID 396
Score = 24.9 bits (48), Expect(5) = 5e-072
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -2
Query: 1170 KHVLKNSLDLRRY 1132
KHVLK SLDL R+
Sbjct: 41 KHVLKVSLDLTRF 3
>gb|CD222241.1|CD222241 CCC1_2_D02.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_2_D02_A007 5', mRNA sequence
Length = 534
Score = 244 bits (528), Expect(2) = 6e-072
Identities = 90/108 (83%), Positives = 98/108 (90%)
Frame = -1 / +3
Query: 1920 YKDLEAEAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKG 1741
++ LEAEAAAA VP SIV+PLLRTGYHFQPP NWINDPNAPMYYKGWYH FYQYNPKG
Sbjct: 129 HRSLEAEAAAAPPSVPASIVSPLLRTGYHFQPPMNWINDPNAPMYYKGWYHLFYQYNPKG 308
Query: 1740 AVWGNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AVWGNIVWAHS+SRDLINW+ALEPA+ PSIP D+YGCWSGSAT+L DG
Sbjct: 309 AVWGNIVWAHSISRDLINWIALEPAIYPSIPSDQYGCWSGSATMLQDG 452
Score = 186 bits (401), Expect(3) = 5e-050
Identities = 77/94 (81%), Positives = 82/94 (87%)
Frame = +2 / -3
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PS S VA+PDQQPY S GMLG AGSSA QLMRSRD E AHTMLPHTAPLGLYW* + YH
Sbjct: 451 PSCSIVAEPDQQPYWSEGMLG*MAGSSAIQLMRSRDME*AHTMLPHTAPLGLYW*NR*YH 272
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 1879
PL*Y+GALGSLIQF+GGWKWYPVLSRGLTM+ GT
Sbjct: 271 PL*YIGALGSLIQFIGGWKWYPVLSRGLTMEAGT 170
Score = 123 bits (263), Expect(2) = 7e-031
Identities = 56/95 (58%), Positives = 64/95 (67%)
Frame = -3 / +2
Query: 1912 PRSRGCCGDGPGAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRM 1733
P RG G GA +H QPPAQD VP PA ELDQ QR+ VLQG+V +LP+Q QGR M
Sbjct: 137 PGGRGGGGTAVGAGLHCQPPAQDRVPFPATNELDQRPQRSDVLQGMVSPVLPVQPQGRSM 316
Query: 1732 GQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 1628
GQHRVG+L + RPHQL A A +HP R VRLL
Sbjct: 317 GQHRVGSLHITRPHQLDRAGARHLPEHPLRPVRLL 421
Score = 108 bits (230), Expect = 4e-022
Identities = 53/105 (50%), Positives = 62/105 (59%)
Frame = +1 / -2
Query: 1606 QHRRRPGPAAVPVARDAWSERRL*RHPVDEVSRHRVRPHDVAPYGALGIXXXXXXXXXXX 1785
QHRRR PAAV V DA + L R PVDEV+ + V PHDVAPY ALG+
Sbjct: 443 QHRRRARPAAVLVGGDARVDGGLQRDPVDEVA*YGVSPHDVAPYCALGVVLVEQVIPSLV 264
Query: 1786 XHGRVGIIDPVLGGLEVVPRPEQGVDDGRRHLVRRRSSLGFEVLV 1920
H VG++DPV LE+VP PEQG D+G RH R R LG + V
Sbjct: 263 VHRSVGVVDPVHWWLEMVPCPEQGADNGGRHRRRCRRRLGLQAPV 129
Score = 49.6 bits (102), Expect(2) = 6e-072
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -1 / +3
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKN 1516
G P I+YTG++ PDINYQV+ +A+PKN
Sbjct: 450 GTPAILYTGINRPDINYQVQVLAFPKN 530
Score = 33.6 bits (67), Expect(2) = 7e-031
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3 / +2
Query: 1579 VHGRGPPGHQLPGPERGVPEER 1514
+H PPGHQLPG +P+ER
Sbjct: 467 LHWDQPPGHQLPGAGARLPQER 532
Score = 30.9 bits (61), Expect(3) = 5e-050
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +2 / -3
Query: 1517 FFGYATFRTW*LMSGWSTPVYMITGPP 1597
F G A+ TW*LMSG PV I G P
Sbjct: 529 FLGKASTCTW*LMSGRLIPV*RIAGVP 449
Score = 22.1 bits (42), Expect(3) = 5e-050
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / -3
Query: 1928 TTCDAPASCNSSS 1966
TT +APASC++ S
Sbjct: 124 TTWEAPASCSAVS 86
>gb|CF485817.1|CF485817 POL1_33_G12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_G12_A002 5', mRNA sequence
Length = 714
Score = 153 bits (329), Expect(4) = 1e-071
Identities = 58/80 (72%), Positives = 62/80 (77%)
Frame = -1 / +3
Query: 1836 HFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEPALRP 1657
H PK+WINDPN PMYYK YH FYQYNPKGAVWGNI WAHSVS DLI+W AL+P + P
Sbjct: 123 HTVYPKHWINDPNGPMYYKRLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDWTALDPGIYP 302
Query: 1656 SIPGDRYGCWSGSATVLPDG 1597
S D GCWSGSATVLP G
Sbjct: 303 SKNFDIKGCWSGSATVLPSG 362
Score = 123 bits (263), Expect(3) = 4e-047
Identities = 52/76 (68%), Positives = 59/76 (77%)
Frame = +2 / -3
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P GSTVA+PDQQP +S + G GSSA Q +RS DTECAH+MLPHTAPLGLYW*K+WY
Sbjct: 361 PLGSTVAEPDQQPLMSKFLDG*IPGSSAVQSIRSVDTECAHSMLPHTAPLGLYW*KRWYS 182
Query: 1778 PL*YMGALGSLIQFLG 1825
L*Y+G GSLIQ G
Sbjct: 181 LL*YIGPFGSLIQCFG 134
Score = 100 bits (213), Expect(4) = 1e-071
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = -1 / +3
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGP 1399
++QV+N+AYPKN+SDP LREWVKP +NP+I P+ GIN + FRDPTTAW GP
Sbjct: 399 DHQVQNLAYPKNLSDPFLREWVKPDYNPIISPDSGINASAFRDPTTAWLGP 551
Score = 71.2 bits (149), Expect(3) = 4e-047
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +2 / -3
Query: 1361 AALPTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFR 1540
+ L +SR GP QAVVGSR + LMP SG M GL G THSR +GS+ F G A F
Sbjct: 589 STLLPTSRRQCLSGPSQAVVGSRKALALMPLSGEMMGL*SGLTHSRRNGSERFLG*ARFC 410
Query: 1541 TW* 1549
TW*
Sbjct: 409 TW* 401
Score = 50.1 bits (103), Expect(4) = 1e-071
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = -1 / +3
Query: 1344 RGVAYVYXXXXXXXXXXXXRPLHSAPTGMWECPDFYPVS 1228
+G+A +Y PLHS TGMWECPDF+PV+
Sbjct: 594 KGLAVLYRSRDFKRWVKAHHPLHSGLTGMWECPDFFPVA 710
Score = 35.4 bits (71), Expect(3) = 4e-047
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = +2 / -3
Query: 1232 TG*KSGHSHIPVGAECSGXXXXXXXXXXXXXYTYATP 1342
TG KSGHSHIPV E SG Y+ A P
Sbjct: 706 TGKKSGHSHIPVRPEWSGWCALTQRLKSRLRYSTARP 596
Score = 26.3 bits (51), Expect(4) = 1e-071
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +3
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P++MYTG+D D Q
Sbjct: 360 GMPIVMYTGIDPNDHQVQ 413
>gb|CX607759.1|CX607759 ANR1_30_C08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_30_C08_A002 5', mRNA sequence
Length = 641
Score = 88.6 bits (187), Expect(5) = 3e-071
Identities = 32/40 (80%), Positives = 37/40 (92%)
Frame = -1 / +1
Query: 1716 AHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AHS+SRDLINW+ALEPA+ PSIP D+YGCWSGSAT+L DG
Sbjct: 1 AHSISRDLINWIALEPAIYPSIPSDQYGCWSGSATMLQDG 120
Score = 75.8 bits (159), Expect(5) = 3e-071
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLREWVKPS 1477
G P I+YTG++ PDINYQV+ +A+PKN SDPLLREW KP+
Sbjct: 118 GTPAILYTGINRPDINYQVQVLAFPKNASDPLLREWEKPA 237
Score = 75.3 bits (158), Expect(5) = 3e-071
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = -1 / +1
Query: 1170 KHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHRL 1051
K+VLKNSLDL RYDYYT+G+Y R +RY PD+P GD HRL
Sbjct: 520 KYVLKNSLDLTRYDYYTIGSYDERKDRYYPDNPNGDYHRL 639
Score = 64.3 bits (134), Expect(5) = 5e-040
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTE 1711
PS S VA+PDQQPY S GMLG AGSSA QLMRSRD E
Sbjct: 119 PSCSIVAEPDQQPYWSEGMLG*MAGSSAIQLMRSRDME 6
Score = 56.5 bits (117), Expect(5) = 3e-071
Identities = 22/39 (56%), Positives = 24/39 (61%)
Frame = -1 / +1
Query: 1344 RGVAYVYXXXXXXXXXXXXRPLHSAPTGMWECPDFYPVS 1228
RG+A VY PLHSA TGMWECPDF+PVS
Sbjct: 358 RGMAIVYRSRDFRRWTKAKHPLHSALTGMWECPDFFPVS 474
Score = 55.6 bits (115), Expect(5) = 5e-040
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +2 / -1
Query: 1481 GFTHSRSSGSDTFFGYATFRTW*LMSGWSTPVYMITGPP 1597
GF+HSRSSGSD F G A+ TW*LMSG PV I G P
Sbjct: 233 GFSHSRSSGSDAFLGKASTCTW*LMSGRLIPV*RIAGVP 117
Score = 51.0 bits (105), Expect(5) = 3e-071
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -1 / +1
Query: 1479 SHNPVIVPEGGINVTQFRDPTTAW 1408
++NPV P GGIN TQFRDPTTAW
Sbjct: 238 AYNPVAAPVGGINATQFRDPTTAW 309
Score = 48.3 bits (99), Expect(5) = 5e-040
Identities = 21/38 (55%), Positives = 21/38 (55%)
Frame = +2 / -1
Query: 1232 TG*KSGHSHIPVGAECSGXXXXXXXXXXXXXYTYATPR 1345
TG KSGHSHIPV AECSG YT A PR
Sbjct: 470 TGKKSGHSHIPVSAECSGCLAFVQRRKSRLRYTIAMPR 357
Score = 44.1 bits (90), Expect(5) = 5e-040
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2 / -1
Query: 1412 AVVGSRNCVTLMPPSGTMTGL 1474
AVVGSRNCV LMPP+G TGL
Sbjct: 305 AVVGSRNCVALMPPTGAATGL 243
Score = 28.6 bits (56), Expect(5) = 5e-040
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +2 / -1
Query: 1067 PAGSSGTYRSALGWYVPTVXXXXXXXXXLFLSTCL 1171
P G SG YRS L Y P V LFLST L
Sbjct: 623 PFGLSG*YRSFLSSYDPMV**SYRVRSRLFLSTYL 519
>gb|CF488213.1|CF488213 POL1_48_A10.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_48_A10_A002 5', mRNA sequence
Length = 733
Score = 181 bits (389), Expect(3) = 2e-070
Identities = 67/89 (75%), Positives = 73/89 (82%)
Frame = -1 / +3
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
V+ + RTGYHFQPPK+WINDPN PMYYKG YH FYQYNPKGAVWGNI WAHSVS DLI+W
Sbjct: 162 VDEMSRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDW 341
Query: 1683 VALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AL+P + PS D GCWSGSATVLP G
Sbjct: 342 TALDPGIYPSKNFDIKGCWSGSATVLPSG 428
Score = 151 bits (324), Expect(2) = 5e-050
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P GSTVA+PDQQP +S + G GSSA Q +RS DTECAH+MLPHTAPLGLYW*K+WY
Sbjct: 427 PLGSTVAEPDQQPLMSKFLDG*IPGSSAVQSIRSVDTECAHSMLPHTAPLGLYW*KRWYS 248
Query: 1778 PL*YMGALGSLIQFLGGWKWYPV 1846
PL*Y+G GSLIQ GGWKWYPV
Sbjct: 247 PL*YIGPFGSLIQCFGGWKWYPV 179
Score = 100 bits (214), Expect(3) = 2e-070
Identities = 35/51 (68%), Positives = 45/51 (88%)
Frame = -1 / +3
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGP 1399
++QV+N+AYPKN+SDP LREWVKP++NP+I P+ GIN + FRDPTTAW GP
Sbjct: 465 DHQVQNLAYPKNLSDPFLREWVKPNYNPIISPDSGINASAFRDPTTAWLGP 617
Score = 69.8 bits (146), Expect(2) = 5e-050
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +2 / -1
Query: 1361 AALPTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFR 1540
+ L +SR GP QAVVGSR + LMP SG M GL G THSR +GS+ F G A F
Sbjct: 655 STLLPTSRRQCLSGPSQAVVGSRKALALMPLSGEMMGL*LGLTHSRRNGSERFLG*ARFC 476
Query: 1541 TW* 1549
TW*
Sbjct: 475 TW* 467
Score = 26.3 bits (51), Expect(3) = 2e-070
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +3
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P++MYTG+D D Q
Sbjct: 426 GMPIVMYTGIDPNDHQVQ 479
>gb|CF480551.1|CF480551 POL1_66_A09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_66_A09_A002 5', mRNA sequence
Length = 735
Score = 181 bits (389), Expect(3) = 3e-070
Identities = 67/89 (75%), Positives = 73/89 (82%)
Frame = -1 / +2
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
V+ + RTGYHFQPPK+WINDPN PMYYKG YH FYQYNPKGAVWGNI WAHSVS DLI+W
Sbjct: 167 VDEMSRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDW 346
Query: 1683 VALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AL+P + PS D GCWSGSATVLP G
Sbjct: 347 TALDPGIYPSKNFDIKGCWSGSATVLPSG 433
Score = 151 bits (324), Expect(2) = 2e-050
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P GSTVA+PDQQP +S + G GSSA Q +RS DTECAH+MLPHTAPLGLYW*K+WY
Sbjct: 432 PLGSTVAEPDQQPLMSKFLDG*IPGSSAVQSIRSVDTECAHSMLPHTAPLGLYW*KRWYS 253
Query: 1778 PL*YMGALGSLIQFLGGWKWYPV 1846
PL*Y+G GSLIQ GGWKWYPV
Sbjct: 252 PL*YIGPFGSLIQCFGGWKWYPV 184
Score = 100 bits (213), Expect(3) = 3e-070
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = -1 / +2
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGP 1399
++QV+N+AYPKN+SDP LREWVKP +NP+I P+ GIN + FRDPTTAW GP
Sbjct: 470 DHQVQNLAYPKNLSDPFLREWVKPDYNPIISPDSGINASAFRDPTTAWLGP 622
Score = 71.2 bits (149), Expect(2) = 2e-050
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +2 / -1
Query: 1361 AALPTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFR 1540
+ L +SR GP QAVVGSR + LMP SG M GL G THSR +GS+ F G A F
Sbjct: 660 STLLPTSRRQCLSGPSQAVVGSRKALALMPLSGEMMGL*SGLTHSRRNGSERFLG*ARFC 481
Query: 1541 TW* 1549
TW*
Sbjct: 480 TW* 472
Score = 26.3 bits (51), Expect(3) = 3e-070
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +2
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P++MYTG+D D Q
Sbjct: 431 GMPIVMYTGIDPNDHQVQ 484
>gb|CF480721.1|CF480721 POL1_67_B05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_B05_A002 5', mRNA sequence
Length = 736
Score = 181 bits (389), Expect(3) = 3e-070
Identities = 67/89 (75%), Positives = 73/89 (82%)
Frame = -1 / +1
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
V+ + RTGYHFQPPK+WINDPN PMYYKG YH FYQYNPKGAVWGNI WAHSVS DLI+W
Sbjct: 166 VDEMSRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDW 345
Query: 1683 VALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AL+P + PS D GCWSGSATVLP G
Sbjct: 346 TALDPGIYPSNNFDIKGCWSGSATVLPSG 432
Score = 150 bits (323), Expect(2) = 3e-050
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2 / -3
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P GSTVA+PDQQP +S + G GSSA Q +RS DTECAH+MLPHTAPLGLYW*K+WY
Sbjct: 431 PLGSTVAEPDQQPLMSKLLDG*IPGSSAVQSIRSVDTECAHSMLPHTAPLGLYW*KRWYS 252
Query: 1778 PL*YMGALGSLIQFLGGWKWYPV 1846
PL*Y+G GSLIQ GGWKWYPV
Sbjct: 251 PL*YIGPFGSLIQCFGGWKWYPV 183
Score = 100 bits (213), Expect(3) = 3e-070
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = -1 / +1
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGP 1399
++QV+N+AYPKN+SDP LREWVKP +NP+I P+ GIN + FRDPTTAW GP
Sbjct: 469 DHQVQNLAYPKNLSDPFLREWVKPDYNPIISPDSGINASAFRDPTTAWLGP 621
Score = 71.2 bits (149), Expect(2) = 3e-050
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +2 / -3
Query: 1361 AALPTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFR 1540
+ L +SR GP QAVVGSR + LMP SG M GL G THSR +GS+ F G A F
Sbjct: 659 STLLPTSRRQCLSGPSQAVVGSRKALALMPLSGEMMGL*SGLTHSRRNGSERFLG*ARFC 480
Query: 1541 TW* 1549
TW*
Sbjct: 479 TW* 471
Score = 26.3 bits (51), Expect(3) = 3e-070
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P++MYTG+D D Q
Sbjct: 430 GMPIVMYTGIDPNDHQVQ 483
>gb|CF486748.1|CF486748 POL1_39_B11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_39_B11_A002 5', mRNA sequence
Length = 736
Score = 181 bits (389), Expect(3) = 3e-070
Identities = 67/89 (75%), Positives = 73/89 (82%)
Frame = -1 / +1
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
V+ + RTGYHFQPPK+WINDPN PMYYKG YH FYQYNPKGAVWGNI WAHSVS DLI+W
Sbjct: 166 VDEMSRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDW 345
Query: 1683 VALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AL+P + PS D GCWSGSATVLP G
Sbjct: 346 TALDPGIYPSKNFDIKGCWSGSATVLPSG 432
Score = 151 bits (324), Expect(2) = 2e-050
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2 / -3
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P GSTVA+PDQQP +S + G GSSA Q +RS DTECAH+MLPHTAPLGLYW*K+WY
Sbjct: 431 PLGSTVAEPDQQPLMSKFLDG*IPGSSAVQSIRSVDTECAHSMLPHTAPLGLYW*KRWYS 252
Query: 1778 PL*YMGALGSLIQFLGGWKWYPV 1846
PL*Y+G GSLIQ GGWKWYPV
Sbjct: 251 PL*YIGPFGSLIQCFGGWKWYPV 183
Score = 100 bits (213), Expect(3) = 3e-070
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = -1 / +1
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGP 1399
++QV+N+AYPKN+SDP LREWVKP +NP+I P+ GIN + FRDPTTAW GP
Sbjct: 469 DHQVQNLAYPKNLSDPFLREWVKPDYNPIISPDSGINASAFRDPTTAWLGP 621
Score = 71.2 bits (149), Expect(2) = 2e-050
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +2 / -3
Query: 1361 AALPTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFR 1540
+ L +SR GP QAVVGSR + LMP SG M GL G THSR +GS+ F G A F
Sbjct: 659 STLLPTSRRQCLSGPSQAVVGSRKALALMPLSGEMMGL*SGLTHSRRNGSERFLG*ARFC 480
Query: 1541 TW* 1549
TW*
Sbjct: 479 TW* 471
Score = 26.3 bits (51), Expect(3) = 3e-070
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P++MYTG+D D Q
Sbjct: 430 GMPIVMYTGIDPNDHQVQ 483
>gb|CF483368.1|CF483368 POL1_21_F08.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_21_F08_A002 5', mRNA sequence
Length = 730
Score = 181 bits (389), Expect(3) = 3e-070
Identities = 67/89 (75%), Positives = 73/89 (82%)
Frame = -1 / +1
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
V+ + RTGYHFQPPK+WINDPN PMYYKG YH FYQYNPKGAVWGNI WAHSVS DLI+W
Sbjct: 160 VDEMSRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDW 339
Query: 1683 VALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AL+P + PS D GCWSGSATVLP G
Sbjct: 340 TALDPGIYPSKNFDIKGCWSGSATVLPSG 426
Score = 151 bits (324), Expect(2) = 2e-050
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2 / -3
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P GSTVA+PDQQP +S + G GSSA Q +RS DTECAH+MLPHTAPLGLYW*K+WY
Sbjct: 425 PLGSTVAEPDQQPLMSKFLDG*IPGSSAVQSIRSVDTECAHSMLPHTAPLGLYW*KRWYS 246
Query: 1778 PL*YMGALGSLIQFLGGWKWYPV 1846
PL*Y+G GSLIQ GGWKWYPV
Sbjct: 245 PL*YIGPFGSLIQCFGGWKWYPV 177
Score = 100 bits (213), Expect(3) = 3e-070
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = -1 / +1
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGP 1399
++QV+N+AYPKN+SDP LREWVKP +NP+I P+ GIN + FRDPTTAW GP
Sbjct: 463 DHQVQNLAYPKNLSDPFLREWVKPDYNPIISPDSGINASAFRDPTTAWLGP 615
Score = 71.2 bits (149), Expect(2) = 2e-050
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +2 / -3
Query: 1361 AALPTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFR 1540
+ L +SR GP QAVVGSR + LMP SG M GL G THSR +GS+ F G A F
Sbjct: 653 STLLPTSRRQCLSGPSQAVVGSRKALALMPLSGEMMGL*SGLTHSRRNGSERFLG*ARFC 474
Query: 1541 TW* 1549
TW*
Sbjct: 473 TW* 465
Score = 26.3 bits (51), Expect(3) = 3e-070
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P++MYTG+D D Q
Sbjct: 424 GMPIVMYTGIDPNDHQVQ 477
>gb|CF487273.1|CF487273 POL1_42_F11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_42_F11_A002 5', mRNA sequence
Length = 730
Score = 181 bits (389), Expect(3) = 3e-070
Identities = 67/89 (75%), Positives = 73/89 (82%)
Frame = -1 / +2
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
V+ + RTGYHFQPPK+WINDPN PMYYKG YH FYQYNPKGAVWGNI WAHSVS DLI+W
Sbjct: 155 VDEMSRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDW 334
Query: 1683 VALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AL+P + PS D GCWSGSATVLP G
Sbjct: 335 TALDPGIYPSKNFDIKGCWSGSATVLPSG 421
Score = 151 bits (324), Expect(2) = 2e-050
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P GSTVA+PDQQP +S + G GSSA Q +RS DTECAH+MLPHTAPLGLYW*K+WY
Sbjct: 420 PLGSTVAEPDQQPLMSKFLDG*IPGSSAVQSIRSVDTECAHSMLPHTAPLGLYW*KRWYS 241
Query: 1778 PL*YMGALGSLIQFLGGWKWYPV 1846
PL*Y+G GSLIQ GGWKWYPV
Sbjct: 240 PL*YIGPFGSLIQCFGGWKWYPV 172
Score = 100 bits (213), Expect(3) = 3e-070
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = -1 / +2
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGP 1399
++QV+N+AYPKN+SDP LREWVKP +NP+I P+ GIN + FRDPTTAW GP
Sbjct: 458 DHQVQNLAYPKNLSDPFLREWVKPDYNPIISPDSGINASAFRDPTTAWLGP 610
Score = 71.2 bits (149), Expect(2) = 2e-050
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +2 / -2
Query: 1361 AALPTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFR 1540
+ L +SR GP QAVVGSR + LMP SG M GL G THSR +GS+ F G A F
Sbjct: 648 STLLPTSRRQCLSGPSQAVVGSRKALALMPLSGEMMGL*SGLTHSRRNGSERFLG*ARFC 469
Query: 1541 TW* 1549
TW*
Sbjct: 468 TW* 460
Score = 26.3 bits (51), Expect(3) = 3e-070
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +2
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P++MYTG+D D Q
Sbjct: 419 GMPIVMYTGIDPNDHQVQ 472
>gb|CF483034.1|CF483034 POL1_10_G04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_10_G04_A002 5', mRNA sequence
Length = 718
Score = 181 bits (389), Expect(3) = 3e-070
Identities = 67/89 (75%), Positives = 73/89 (82%)
Frame = -1 / +2
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
V+ + RTGYHFQPPK+WINDPN PMYYKG YH FYQYNPKGAVWGNI WAHSVS DLI+W
Sbjct: 158 VDEMSRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDW 337
Query: 1683 VALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AL+P + PS D GCWSGSATVLP G
Sbjct: 338 TALDPGIYPSKNFDIKGCWSGSATVLPSG 424
Score = 151 bits (324), Expect(2) = 2e-050
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P GSTVA+PDQQP +S + G GSSA Q +RS DTECAH+MLPHTAPLGLYW*K+WY
Sbjct: 423 PLGSTVAEPDQQPLMSKFLDG*IPGSSAVQSIRSVDTECAHSMLPHTAPLGLYW*KRWYS 244
Query: 1778 PL*YMGALGSLIQFLGGWKWYPV 1846
PL*Y+G GSLIQ GGWKWYPV
Sbjct: 243 PL*YIGPFGSLIQCFGGWKWYPV 175
Score = 100 bits (213), Expect(3) = 3e-070
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = -1 / +2
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGP 1399
++QV+N+AYPKN+SDP LREWVKP +NP+I P+ GIN + FRDPTTAW GP
Sbjct: 461 DHQVQNLAYPKNLSDPFLREWVKPDYNPIISPDSGINASAFRDPTTAWLGP 613
Score = 71.2 bits (149), Expect(2) = 2e-050
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +2 / -2
Query: 1361 AALPTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFR 1540
+ L +SR GP QAVVGSR + LMP SG M GL G THSR +GS+ F G A F
Sbjct: 651 STLLPTSRRQCLSGPSQAVVGSRKALALMPLSGEMMGL*SGLTHSRRNGSERFLG*ARFC 472
Query: 1541 TW* 1549
TW*
Sbjct: 471 TW* 463
Score = 26.3 bits (51), Expect(3) = 3e-070
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +2
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P++MYTG+D D Q
Sbjct: 422 GMPIVMYTGIDPNDHQVQ 475
>gb|CF481221.1|CF481221 POL1_70_E03.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_70_E03_A002 5', mRNA sequence
Length = 689
Score = 181 bits (389), Expect(3) = 3e-070
Identities = 67/89 (75%), Positives = 73/89 (82%)
Frame = -1 / +3
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
V+ + RTGYHFQPPK+WINDPN PMYYKG YH FYQYNPKGAVWGNI WAHSVS DLI+W
Sbjct: 168 VDEMSRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDW 347
Query: 1683 VALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AL+P + PS D GCWSGSATVLP G
Sbjct: 348 TALDPGIYPSKNFDIKGCWSGSATVLPSG 434
Score = 151 bits (324), Expect(2) = 2e-050
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P GSTVA+PDQQP +S + G GSSA Q +RS DTECAH+MLPHTAPLGLYW*K+WY
Sbjct: 433 PLGSTVAEPDQQPLMSKFLDG*IPGSSAVQSIRSVDTECAHSMLPHTAPLGLYW*KRWYS 254
Query: 1778 PL*YMGALGSLIQFLGGWKWYPV 1846
PL*Y+G GSLIQ GGWKWYPV
Sbjct: 253 PL*YIGPFGSLIQCFGGWKWYPV 185
Score = 100 bits (213), Expect(3) = 3e-070
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = -1 / +3
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGP 1399
++QV+N+AYPKN+SDP LREWVKP +NP+I P+ GIN + FRDPTTAW GP
Sbjct: 471 DHQVQNLAYPKNLSDPFLREWVKPDYNPIISPDSGINASAFRDPTTAWLGP 623
Score = 71.2 bits (149), Expect(2) = 2e-050
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +2 / -2
Query: 1361 AALPTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFR 1540
+ L +SR GP QAVVGSR + LMP SG M GL G THSR +GS+ F G A F
Sbjct: 661 STLLPTSRRQCLSGPSQAVVGSRKALALMPLSGEMMGL*SGLTHSRRNGSERFLG*ARFC 482
Query: 1541 TW* 1549
TW*
Sbjct: 481 TW* 473
Score = 26.3 bits (51), Expect(3) = 3e-070
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +3
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P++MYTG+D D Q
Sbjct: 432 GMPIVMYTGIDPNDHQVQ 485
>gb|CF481558.1|CF481558 POL1_72_E04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_72_E04_A002 5', mRNA sequence
Length = 652
Score = 181 bits (389), Expect(3) = 3e-070
Identities = 67/89 (75%), Positives = 73/89 (82%)
Frame = -1 / +2
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
V+ + RTGYHFQPPK+WINDPN PMYYKG YH FYQYNPKGAVWGNI WAHSVS DLI+W
Sbjct: 164 VDEMSRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDW 343
Query: 1683 VALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AL+P + PS D GCWSGSATVLP G
Sbjct: 344 TALDPGIYPSKNFDIKGCWSGSATVLPSG 430
Score = 151 bits (324), Expect(2) = 3e-050
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P GSTVA+PDQQP +S + G GSSA Q +RS DTECAH+MLPHTAPLGLYW*K+WY
Sbjct: 429 PLGSTVAEPDQQPLMSKFLDG*IPGSSAVQSIRSVDTECAHSMLPHTAPLGLYW*KRWYS 250
Query: 1778 PL*YMGALGSLIQFLGGWKWYPV 1846
PL*Y+G GSLIQ GGWKWYPV
Sbjct: 249 PL*YIGPFGSLIQCFGGWKWYPV 181
Score = 100 bits (213), Expect(3) = 3e-070
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = -1 / +2
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGP 1399
++QV+N+AYPKN+SDP LREWVKP +NP+I P+ GIN + FRDPTTAW GP
Sbjct: 467 DHQVQNLAYPKNLSDPFLREWVKPDYNPIISPDSGINASAFRDPTTAWLGP 619
Score = 70.7 bits (148), Expect(2) = 3e-050
Identities = 33/58 (56%), Positives = 37/58 (63%)
Frame = +2 / -2
Query: 1376 SSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW* 1549
+SR GP QAVVGSR + LMP SG M GL G THSR +GS+ F G A F TW*
Sbjct: 642 TSRRQCLSGPSQAVVGSRKALALMPLSGEMMGL*SGLTHSRRNGSERFLG*ARFCTW* 469
Score = 26.3 bits (51), Expect(3) = 3e-070
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +2
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P++MYTG+D D Q
Sbjct: 428 GMPIVMYTGIDPNDHQVQ 481
>gb|CF483384.1|CF483384 POL1_21_H05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_21_H05_A002 5', mRNA sequence
Length = 653
Score = 181 bits (389), Expect(3) = 3e-070
Identities = 67/89 (75%), Positives = 73/89 (82%)
Frame = -1 / +1
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
V+ + RTGYHFQPPK+WINDPN PMYYKG YH FYQYNPKGAVWGNI WAHSVS DLI+W
Sbjct: 160 VDEMSRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDW 339
Query: 1683 VALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AL+P + PS D GCWSGSATVLP G
Sbjct: 340 TALDPGIYPSKNFDIKGCWSGSATVLPSG 426
Score = 151 bits (324), Expect(2) = 2e-050
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P GSTVA+PDQQP +S + G GSSA Q +RS DTECAH+MLPHTAPLGLYW*K+WY
Sbjct: 425 PLGSTVAEPDQQPLMSKFLDG*IPGSSAVQSIRSVDTECAHSMLPHTAPLGLYW*KRWYS 246
Query: 1778 PL*YMGALGSLIQFLGGWKWYPV 1846
PL*Y+G GSLIQ GGWKWYPV
Sbjct: 245 PL*YIGPFGSLIQCFGGWKWYPV 177
Score = 100 bits (213), Expect(3) = 3e-070
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = -1 / +1
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGP 1399
++QV+N+AYPKN+SDP LREWVKP +NP+I P+ GIN + FRDPTTAW GP
Sbjct: 463 DHQVQNLAYPKNLSDPFLREWVKPDYNPIISPDSGINASAFRDPTTAWLGP 615
Score = 71.2 bits (149), Expect(2) = 2e-050
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +2 / -1
Query: 1361 AALPTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFR 1540
+ L +SR GP QAVVGSR + LMP SG M GL G THSR +GS+ F G A F
Sbjct: 653 STLLPTSRRQCLSGPSQAVVGSRKALALMPLSGEMMGL*SGLTHSRRNGSERFLG*ARFC 474
Query: 1541 TW* 1549
TW*
Sbjct: 473 TW* 465
Score = 26.3 bits (51), Expect(3) = 3e-070
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P++MYTG+D D Q
Sbjct: 424 GMPIVMYTGIDPNDHQVQ 477
>gb|BE595814.1|BE595814 PI1_54_D08.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 474
Score = 267 bits (578), Expect = 4e-070
Identities = 104/137 (75%), Positives = 116/137 (84%)
Frame = -1 / +1
Query: 1137 RYDYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFYDPAKRRRILWGWANESD 958
RYDYYT+G+Y R +RY PD+P GD HRLRYDYGNFYASKTFYDPAKRRR+L GWANESD
Sbjct: 10 RYDYYTIGSYDKRKDRYYPDNPNGDYHRLRYDYGNFYASKTFYDPAKRRRVLLGWANESD 189
Query: 957 TAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLRNRVIKAGHHVEV 778
+ DD AKGWAGI AIPR +WLDPSGKQLLQWPIEEVE LR K+VT+ +V+K G H EV
Sbjct: 190 SVPDDKAKGWAGIHAIPRKIWLDPSGKQLLQWPIEEVEKLRGKAVTVGGKVVKPGEHFEV 369
Query: 777 TGIQTAQADVEVSFEVS 727
TGI T QADVEVSFE+S
Sbjct: 370 TGIATYQADVEVSFEIS 420
Score = 163 bits (350), Expect = 1e-038
Identities = 82/132 (62%), Positives = 87/132 (65%)
Frame = +2 / -2
Query: 728 DTSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVL 907
+ SKLTSTSA V +PVTS P TL VT F LS STSS+GHCSSCFPLGSS L
Sbjct: 419 EISKLTSTSAW*VAMPVTSKCSPGFTTLPPTVTAFPLSFSTSSMGHCSSCFPLGSSQIFL 240
Query: 908 GIAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLPXXXXXXXXXPAGSSGT 1087
GIAW+PA PLA SS +SDSLA P RRR AGS*NVLDA*KLP P G SG
Sbjct: 239 GIAWMPAHPLALSSGTLSDSLAHPRSTRRRFAGS*NVLDA*KLP*SYRSRW*SPFGLSG* 60
Query: 1088 YRSALGWYVPTV 1123
YRS L Y P V
Sbjct: 59 YRSFLLSYDPMV 24
>gb|CF483505.1|CF483505 POL1_22_E10.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_22_E10_A002 5', mRNA sequence
Length = 639
Score = 181 bits (389), Expect(3) = 6e-070
Identities = 67/89 (75%), Positives = 73/89 (82%)
Frame = -1 / +2
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
V+ + RTGYHFQPPK+WINDPN PMYYKG YH FYQYNPKGAVWGNI WAHSVS DLI+W
Sbjct: 155 VDEMSRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDW 334
Query: 1683 VALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AL+P + PS D GCWSGSATVLP G
Sbjct: 335 TALDPGIYPSKNFDIKGCWSGSATVLPSG 421
Score = 151 bits (324), Expect(2) = 4e-050
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P GSTVA+PDQQP +S + G GSSA Q +RS DTECAH+MLPHTAPLGLYW*K+WY
Sbjct: 420 PLGSTVAEPDQQPLMSKFLDG*IPGSSAVQSIRSVDTECAHSMLPHTAPLGLYW*KRWYS 241
Query: 1778 PL*YMGALGSLIQFLGGWKWYPV 1846
PL*Y+G GSLIQ GGWKWYPV
Sbjct: 240 PL*YIGPFGSLIQCFGGWKWYPV 172
Score = 99.1 bits (210), Expect(3) = 6e-070
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = -1 / +2
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGP 1399
QV+N+AYPKN+SDP LREWVKP +NP+I P+ GIN + FRDPTTAW GP
Sbjct: 464 QVQNLAYPKNLSDPFLREWVKPDYNPIISPDSGINASAFRDPTTAWLGP 610
Score = 70.3 bits (147), Expect(2) = 4e-050
Identities = 32/57 (56%), Positives = 36/57 (63%)
Frame = +2 / -1
Query: 1376 SSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW 1546
+SR GP QAVVGSR + LMP SG M GL G THSR +GS+ F G A F TW
Sbjct: 633 TSRRQCLSGPSQAVVGSRKALALMPLSGEMMGL*SGLTHSRRNGSERFLG*ARFCTW 463
Score = 26.3 bits (51), Expect(3) = 6e-070
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +2
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P++MYTG+D D Q
Sbjct: 419 GMPIVMYTGIDPNDRQVQ 472
>gb|CF480611.1|CF480611 POL1_66_G02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_66_G02_A002 5', mRNA sequence
Length = 731
Score = 178 bits (384), Expect(3) = 1e-069
Identities = 66/89 (74%), Positives = 72/89 (80%)
Frame = -1 / +2
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
V+ + RTGYHFQPPK+WINDPN PMYYKG YH FYQYNP GAVWGNI WAHSVS DLI+W
Sbjct: 161 VDEMSRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPNGAVWGNIEWAHSVSTDLIDW 340
Query: 1683 VALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AL+P + PS D GCWSGSATVLP G
Sbjct: 341 TALDPGIYPSKNFDIKGCWSGSATVLPSG 427
Score = 151 bits (324), Expect(2) = 2e-050
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2 / -3
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P GSTVA+PDQQP +S + G GSSA Q +RS DTECAH+MLPHTAPLGLYW*K+WY
Sbjct: 426 PLGSTVAEPDQQPLMSKFLDG*IPGSSAVQSIRSVDTECAHSMLPHTAPLGLYW*KRWYS 247
Query: 1778 PL*YMGALGSLIQFLGGWKWYPV 1846
PL*Y+G GSLIQ GGWKWYPV
Sbjct: 246 PL*YIGPFGSLIQCFGGWKWYPV 178
Score = 100 bits (213), Expect(3) = 1e-069
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = -1 / +2
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGP 1399
++QV+N+AYPKN+SDP LREWVKP +NP+I P+ GIN + FRDPTTAW GP
Sbjct: 464 DHQVQNLAYPKNLSDPFLREWVKPDYNPIISPDSGINASAFRDPTTAWLGP 616
Score = 71.2 bits (149), Expect(2) = 2e-050
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +2 / -3
Query: 1361 AALPTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFR 1540
+ L +SR GP QAVVGSR + LMP SG M GL G THSR +GS+ F G A F
Sbjct: 654 STLLPTSRRQCLSGPSQAVVGSRKALALMPLSGEMMGL*SGLTHSRRNGSERFLG*ARFC 475
Query: 1541 TW* 1549
TW*
Sbjct: 474 TW* 466
Score = 26.3 bits (51), Expect(3) = 1e-069
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +2
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P++MYTG+D D Q
Sbjct: 425 GMPIVMYTGIDPNDHQVQ 478
>gb|CF482541.1|CF482541 POL1_7_C12.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_7_C12_A002
5', mRNA sequence
Length = 726
Score = 181 bits (389), Expect(3) = 1e-069
Identities = 67/89 (75%), Positives = 73/89 (82%)
Frame = -1 / +2
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
V+ + RTGYHFQPPK+WINDPN PMYYKG YH FYQYNPKGAVWGNI WAHSVS DLI+W
Sbjct: 167 VDEMSRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDW 346
Query: 1683 VALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AL+P + PS D GCWSGSATVLP G
Sbjct: 347 TALDPGIYPSKNFDIKGCWSGSATVLPSG 433
Score = 151 bits (324), Expect(2) = 1e-049
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P GSTVA+PDQQP +S + G GSSA Q +RS DTECAH+MLPHTAPLGLYW*K+WY
Sbjct: 432 PLGSTVAEPDQQPLMSKFLDG*IPGSSAVQSIRSVDTECAHSMLPHTAPLGLYW*KRWYS 253
Query: 1778 PL*YMGALGSLIQFLGGWKWYPV 1846
PL*Y+G GSLIQ GGWKWYPV
Sbjct: 252 PL*YIGPFGSLIQCFGGWKWYPV 184
Score = 98.2 bits (208), Expect(3) = 1e-069
Identities = 34/51 (66%), Positives = 44/51 (86%)
Frame = -1 / +2
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGP 1399
++QV+N+AYPKN+SDP LREWVKP +NP+I P+ GI+ + FRDPTTAW GP
Sbjct: 470 DHQVQNLAYPKNLSDPFLREWVKPDYNPIISPDSGIDASAFRDPTTAWLGP 622
Score = 68.4 bits (143), Expect(2) = 1e-049
Identities = 33/63 (52%), Positives = 38/63 (60%)
Frame = +2 / -1
Query: 1361 AALPTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFR 1540
+ L +SR GP QAVVGSR + MP SG M GL G THSR +GS+ F G A F
Sbjct: 660 STLLPTSRRQCLSGPSQAVVGSRKALASMPLSGEMMGL*SGLTHSRRNGSERFLG*ARFC 481
Query: 1541 TW* 1549
TW*
Sbjct: 480 TW* 472
Score = 26.3 bits (51), Expect(3) = 1e-069
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +2
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P++MYTG+D D Q
Sbjct: 431 GMPIVMYTGIDPNDHQVQ 484
>gb|CF486935.1|CF486935 POL1_40_F03.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_40_F03_A002 5', mRNA sequence
Length = 725
Score = 181 bits (389), Expect(3) = 1e-069
Identities = 67/89 (75%), Positives = 73/89 (82%)
Frame = -1 / +3
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
V+ + RTGYHFQPPK+WINDPN PMYYKG YH FYQYNPKGAVWGNI WAHSVS DLI+W
Sbjct: 150 VDEMSRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDW 329
Query: 1683 VALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AL+P + PS D GCWSGSATVLP G
Sbjct: 330 TALDPGIYPSKNFDIKGCWSGSATVLPSG 416
Score = 151 bits (324), Expect(2) = 2e-050
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P GSTVA+PDQQP +S + G GSSA Q +RS DTECAH+MLPHTAPLGLYW*K+WY
Sbjct: 415 PLGSTVAEPDQQPLMSKFLDG*IPGSSAVQSIRSVDTECAHSMLPHTAPLGLYW*KRWYS 236
Query: 1778 PL*YMGALGSLIQFLGGWKWYPV 1846
PL*Y+G GSLIQ GGWKWYPV
Sbjct: 235 PL*YIGPFGSLIQCFGGWKWYPV 167
Score = 98.2 bits (208), Expect(3) = 1e-069
Identities = 34/51 (66%), Positives = 44/51 (86%)
Frame = -1 / +3
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGP 1399
++QV+N+AYPKN+SDP LREWVKP ++P+I P+ GIN + FRDPTTAW GP
Sbjct: 453 DHQVQNLAYPKNLSDPFLREWVKPDYSPIISPDSGINASAFRDPTTAWLGP 605
Score = 71.2 bits (149), Expect(2) = 2e-050
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +2 / -2
Query: 1361 AALPTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFR 1540
+ L +SR GP QAVVGSR + LMP SG M GL G THSR +GS+ F G A F
Sbjct: 643 STLLPTSRRQCLSGPSQAVVGSRKALALMPLSGEMMGL*SGLTHSRRNGSERFLG*ARFC 464
Query: 1541 TW* 1549
TW*
Sbjct: 463 TW* 455
Score = 26.3 bits (51), Expect(3) = 1e-069
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +3
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P++MYTG+D D Q
Sbjct: 414 GMPIVMYTGIDPNDHQVQ 467
>gb|CW033209.1|CW033209 104_262_10501822_115_30362 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10501822, DNA
sequence
Length = 424
Score = 141 bits (302), Expect(3) = 8e-069
Identities = 55/57 (96%), Positives = 55/57 (96%)
Frame = -1 / +3
Query: 1062 EHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWL 892
E RLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWA IQAIPRTVWL
Sbjct: 252 ERRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAVIQAIPRTVWL 422
Score = 109 bits (232), Expect(3) = 8e-069
Identities = 45/55 (81%), Positives = 46/55 (83%)
Frame = -1 / +3
Query: 1224 GGAPRAGLETSVPPGPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDE 1060
G R GLETSVP G RVKHVLKNSLDLRRYDYYTVGTY AERYVPDDPAGD+
Sbjct: 81 GRRRRVGLETSVPSGARVKHVLKNSLDLRRYDYYTVGTYDRDAERYVPDDPAGDD 245
Score = 96.8 bits (205), Expect(3) = 9e-044
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = +2 / -1
Query: 890 SSHTVLGIAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1039
SSHTVLGIA I A PLATSSAAVSDSLAQPHR+RRR AGS*NVLDA*KLP
Sbjct: 424 SSHTVLGIA*ITAHPLATSSAAVSDSLAQPHRIRRRFAGS*NVLDA*KLP 275
Score = 73.0 bits (153), Expect(3) = 9e-044
Identities = 34/53 (64%), Positives = 34/53 (64%)
Frame = +2 / -1
Query: 1067 PAGSSGTYRSALGWYVPTVXXXXXXXXXLFLSTCLTLGPGGTDVSSPARGAPP 1225
PAGSSGTYRSA YVPTV LFLSTC TL P GTDVSSP R P
Sbjct: 238 PAGSSGTYRSASRSYVPTV**SYRRRSRLFLSTCFTLAPDGTDVSSPTRRRRP 80
Score = 52.4 bits (108), Expect(3) = 8e-069
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -1 / +3
Query: 1284 PLHSAPTGMWECPDFYPVS 1228
PLHSA TGMWECPDFYPVS
Sbjct: 12 PLHSAATGMWECPDFYPVS 68
Score = 48.7 bits (100), Expect(3) = 9e-044
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +2 / -1
Query: 1211 RGAPPLLTG*KSGHSHIPVGAECSG 1285
R + LLTG*KSGHSHIPV AECSG
Sbjct: 85 RPSSSLLTG*KSGHSHIPVAAECSG 11
>gb|CW439175.1|CW439175 fsbb001f157d01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f157d01, DNA
sequence
Length = 456
Score = 231 bits (499), Expect(2) = 2e-067
Identities = 93/107 (86%), Positives = 97/107 (90%)
Frame = -1 / -1
Query: 1062 EHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPS 883
E RLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQ RTVWLDPS
Sbjct: 384 ERRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQENTRTVWLDPS 205
Query: 882 GKQLLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTGIQTAQADVEV 742
GKQLLQWP+EEVEALR K+VTL+NRVIK G HVEVTGIQTAQ + V
Sbjct: 204 GKQLLQWPVEEVEALRGKAVTLKNRVIKPGQHVEVTGIQTAQVSIIV 64
Score = 184 bits (396), Expect(2) = 3e-050
Identities = 83/102 (81%), Positives = 86/102 (84%)
Frame = +2 / +2
Query: 734 SKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLGI 913
+K T CAVCIPVTST CP LITLFLRVT LSASTSS GHCSSCFPLGSSHTVL
Sbjct: 56 NKHTIMLTCAVCIPVTSTCCPGLITLFLRVTALPLSASTSSTGHCSSCFPLGSSHTVLVF 235
Query: 914 AWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1039
+ IPA PLATSSAAVSDSLAQPHR+RRR AGS*NVLDA*KLP
Sbjct: 236 S*IPAHPLATSSAAVSDSLAQPHRIRRRFAGS*NVLDA*KLP 361
Score = 87.2 bits (184), Expect(2) = 1e-021
Identities = 33/45 (73%), Positives = 34/45 (75%)
Frame = -2 / -2
Query: 995 GAASCGAGLTSPTPPPTMWLKAGLESRRFQGRCGWTPVGSSCCSG 861
G SCGAG TSPTPPPTM K G RR +GRCGWTP GSSCCSG
Sbjct: 317 GGGSCGAGPTSPTPPPTMSPKGGPGFRRIRGRCGWTPAGSSCCSG 183
Score = 47.8 bits (98), Expect(2) = 2e-067
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -1 / -1
Query: 1125 YTVGTYHPRAERYVPDDPAGDE 1060
YTVGTY AERYVPDDPAGD+
Sbjct: 456 YTVGTYDRDAERYVPDDPAGDD 391
Score = 38.6 bits (78), Expect(2) = 1e-021
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -2 / -2
Query: 812 TG*SRQDITSR*PGYKRHR 756
TG*S QD TSR*PGYK+HR
Sbjct: 134 TG*SSQDSTSR*PGYKQHR 78
Score = 37.7 bits (76), Expect(2) = 3e-050
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 1067 PAGSSGTYRSALGWYVPTV 1123
PAGSSGTYRSA YVPTV
Sbjct: 398 PAGSSGTYRSASRSYVPTV 454
>gb|CF485659.1|CF485659 POL1_32_G08.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_32_G08_A002 5', mRNA sequence
Length = 606
Score = 181 bits (389), Expect(3) = 3e-067
Identities = 67/89 (75%), Positives = 73/89 (82%)
Frame = -1 / +2
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
V+ + RTGYHFQPPK+WINDPN PMYYKG YH FYQYNPKGAVWGNI WAHSVS DLI+W
Sbjct: 161 VDEMSRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDW 340
Query: 1683 VALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AL+P + PS D GCWSGSATVLP G
Sbjct: 341 TALDPGIYPSKNFDIKGCWSGSATVLPSG 427
Score = 151 bits (324), Expect(2) = 2e-048
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P GSTVA+PDQQP +S + G GSSA Q +RS DTECAH+MLPHTAPLGLYW*K+WY
Sbjct: 426 PLGSTVAEPDQQPLMSKFLDG*IPGSSAVQSIRSVDTECAHSMLPHTAPLGLYW*KRWYS 247
Query: 1778 PL*YMGALGSLIQFLGGWKWYPV 1846
PL*Y+G GSLIQ GGWKWYPV
Sbjct: 246 PL*YIGPFGSLIQCFGGWKWYPV 178
Score = 90.4 bits (191), Expect(3) = 3e-067
Identities = 32/47 (68%), Positives = 41/47 (87%)
Frame = -1 / +2
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTA 1411
++QV+N+AYPKN+SDP LREWVKP +NP+I P+ GIN + FRDPTTA
Sbjct: 464 DHQVQNLAYPKNLSDPFLREWVKPDYNPIISPDSGINASAFRDPTTA 604
Score = 64.8 bits (135), Expect(2) = 2e-048
Identities = 29/47 (61%), Positives = 32/47 (68%)
Frame = +2 / -1
Query: 1409 QAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW* 1549
QAVVGSR + LMP SG M GL G THSR +GS+ F G A F TW*
Sbjct: 606 QAVVGSRKALALMPLSGEMMGL*SGLTHSRRNGSERFLG*ARFCTW* 466
Score = 26.3 bits (51), Expect(3) = 3e-067
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +2
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P++MYTG+D D Q
Sbjct: 425 GMPIVMYTGIDPNDHQVQ 478
>gb|CF485961.1|CF485961 POL1_34_G06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_34_G06_A002 5', mRNA sequence
Length = 633
Score = 184 bits (396), Expect(3) = 2e-066
Identities = 67/84 (79%), Positives = 72/84 (85%)
Frame = -1 / +2
Query: 1848 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEP 1669
RTGYHFQPPKNWINDPN MYYKG YH FYQYNPKGAVWGNIVWAH+VS DL++WV L P
Sbjct: 209 RTGYHFQPPKNWINDPNGVMYYKGVYHLFYQYNPKGAVWGNIVWAHAVSTDLVDWVMLPP 388
Query: 1668 ALRPSIPGDRYGCWSGSATVLPDG 1597
A+ P+ P D GCWSGSATVLPDG
Sbjct: 389 AIYPTAPFDVNGCWSGSATVLPDG 460
Score = 151 bits (325), Expect(2) = 4e-047
Identities = 62/83 (74%), Positives = 66/83 (79%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PSGSTVA+PDQQP S G +G AG S TQ RS DT CAHTMLPHTAPLGLYW* +WY
Sbjct: 459 PSGSTVAEPDQQPLTSNGAVG*IAGGSMTQSTRSVDTACAHTMLPHTAPLGLYW*NRWYT 280
Query: 1778 PL*YMGALGSLIQFLGGWKWYPV 1846
PL*Y+ LGSLIQFLGGWKW PV
Sbjct: 279 PL*YITPLGSLIQFLGGWKW*PV 211
Score = 84.5 bits (178), Expect(3) = 2e-066
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = -1 / +2
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPT 1417
N QV+NVAYPK++SDP LREWVKP +NPVI P G+N T FRDPT
Sbjct: 497 NRQVQNVAYPKDLSDPYLREWVKPDYNPVIAPGPGMNATAFRDPT 631
Score = 59.7 bits (124), Expect(2) = 4e-047
Identities = 26/43 (60%), Positives = 28/43 (65%)
Frame = +2 / -1
Query: 1415 VVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRT 1543
VVGSRN V +P G MTGL G THSR GS+ GYATF T
Sbjct: 633 VVGSRNAVAFIPGPGAMTGL*SGLTHSRRYGSERSLGYATFCT 505
Score = 26.3 bits (51), Expect(3) = 2e-066
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / +2
Query: 1596 GGPVIMYTGVD 1564
G PVIMYTG+D
Sbjct: 458 GTPVIMYTGID 490
>gb|CW162564.1|CW162564 104_569_11151007_148_36439_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151007, DNA
sequence
Length = 690
Score = 164 bits (353), Expect(3) = 8e-066
Identities = 58/67 (86%), Positives = 63/67 (94%)
Frame = -1 / -3
Query: 1797 APMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGS 1618
APMYYKGWYH FYQYNPKGAVWGNIVWAHS+SRDLINW+ALEPA+ PSIP D+YGCWSGS
Sbjct: 439 APMYYKGWYHLFYQYNPKGAVWGNIVWAHSISRDLINWIALEPAIYPSIPSDQYGCWSGS 260
Query: 1617 ATVLPDG 1597
AT+L DG
Sbjct: 259 ATMLQDG 239
Score = 123 bits (263), Expect(3) = 1e-045
Identities = 53/67 (79%), Positives = 56/67 (83%)
Frame = +2 / +3
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PS S VA+PDQQPY S GMLG AGSSA QLMRSRD E AHTMLPHTAPLGLYW* + YH
Sbjct: 240 PSCSIVAEPDQQPYWSEGMLG*MAGSSAIQLMRSRDME*AHTMLPHTAPLGLYW*NR*YH 419
Query: 1778 PL*YMGA 1798
PL*Y+GA
Sbjct: 420 PL*YIGA 440
Score = 75.8 bits (159), Expect(3) = 8e-066
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = -1 / -3
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLREWVKPS 1477
G P I+YTG++ PDINYQV+ +A+PKN SDPLLREW KP+
Sbjct: 241 GTPAILYTGINRPDINYQVQVLAFPKNASDPLLREWEKPA 122
Score = 74.4 bits (156), Expect(2) = 5e-024
Identities = 33/54 (61%), Positives = 39/54 (72%)
Frame = -3 / -2
Query: 1789 VLQGVVPFLLPIQSQGRRMGQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 1628
VLQG+V +LP+Q QGR MGQHRVG+L + RPHQL A A +HP R VRLL
Sbjct: 431 VLQGMVSPVLPVQPQGRSMGQHRVGSLHITRPHQLDRAGARHLPEHPLRPVRLL 270
Score = 59.7 bits (124), Expect(2) = 5e-024
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = -3 / -2
Query: 1579 VHGRGPPGHQLPGPERGVPEERVGPAAPGVGEA 1481
+H PPGHQLPG +P+ERVGPAAPGVGEA
Sbjct: 224 LHWDQPPGHQLPGAGARLPQERVGPAAPGVGEA 126
Score = 55.6 bits (115), Expect(3) = 1e-045
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +2 / +3
Query: 1481 GFTHSRSSGSDTFFGYATFRTW*LMSGWSTPVYMITGPP 1597
GF+HSRSSGSD F G A+ TW*LMSG PV I G P
Sbjct: 126 GFSHSRSSGSDAFLGKASTCTW*LMSGRLIPV*RIAGVP 242
Score = 52.4 bits (108), Expect(3) = 8e-066
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -1 / -3
Query: 1479 SHNPVIVPEGGINVTQFRDPTTAWRGPG 1396
++NPV P GGIN TQFRDPTTAW G
Sbjct: 121 AYNPVAAPVGGINATQFRDPTTAWYADG 38
Score = 46.0 bits (94), Expect(3) = 1e-045
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +2 / +3
Query: 1397 PGPRQAVVGSRNCVTLMPPSGTMTGL 1474
P AVVGSRNCV LMPP+G TGL
Sbjct: 39 PSAYHAVVGSRNCVALMPPTGAATGL 116
>gb|CW199055.1|CW199055 104_624_11183306_148_36855_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11183306, DNA
sequence
Length = 650
Score = 164 bits (353), Expect(3) = 8e-066
Identities = 58/67 (86%), Positives = 63/67 (94%)
Frame = -1 / +2
Query: 1797 APMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGS 1618
APMYYKGWYH FYQYNPKGAVWGNIVWAHS+SRDLINW+ALEPA+ PSIP D+YGCWSGS
Sbjct: 134 APMYYKGWYHLFYQYNPKGAVWGNIVWAHSISRDLINWIALEPAIYPSIPSDQYGCWSGS 313
Query: 1617 ATVLPDG 1597
AT+L DG
Sbjct: 314 ATMLQDG 334
Score = 123 bits (263), Expect(3) = 1e-045
Identities = 53/67 (79%), Positives = 56/67 (83%)
Frame = +2 / -3
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PS S VA+PDQQPY S GMLG AGSSA QLMRSRD E AHTMLPHTAPLGLYW* + YH
Sbjct: 333 PSCSIVAEPDQQPYWSEGMLG*MAGSSAIQLMRSRDME*AHTMLPHTAPLGLYW*NR*YH 154
Query: 1778 PL*YMGA 1798
PL*Y+GA
Sbjct: 153 PL*YIGA 133
Score = 75.8 bits (159), Expect(3) = 8e-066
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = -1 / +2
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLREWVKPS 1477
G P I+YTG++ PDINYQV+ +A+PKN SDPLLREW KP+
Sbjct: 332 GTPAILYTGINRPDINYQVQVLAFPKNASDPLLREWEKPA 451
Score = 74.4 bits (156), Expect(2) = 5e-024
Identities = 33/54 (61%), Positives = 39/54 (72%)
Frame = -3 / +1
Query: 1789 VLQGVVPFLLPIQSQGRRMGQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 1628
VLQG+V +LP+Q QGR MGQHRVG+L + RPHQL A A +HP R VRLL
Sbjct: 142 VLQGMVSPVLPVQPQGRSMGQHRVGSLHITRPHQLDRAGARHLPEHPLRPVRLL 303
Score = 59.7 bits (124), Expect(2) = 5e-024
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = -3 / +1
Query: 1579 VHGRGPPGHQLPGPERGVPEERVGPAAPGVGEA 1481
+H PPGHQLPG +P+ERVGPAAPGVGEA
Sbjct: 349 LHWDQPPGHQLPGAGARLPQERVGPAAPGVGEA 447
Score = 55.6 bits (115), Expect(3) = 1e-045
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +2 / -3
Query: 1481 GFTHSRSSGSDTFFGYATFRTW*LMSGWSTPVYMITGPP 1597
GF+HSRSSGSD F G A+ TW*LMSG PV I G P
Sbjct: 447 GFSHSRSSGSDAFLGKASTCTW*LMSGRLIPV*RIAGVP 331
Score = 52.4 bits (108), Expect(3) = 8e-066
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -1 / +2
Query: 1479 SHNPVIVPEGGINVTQFRDPTTAWRGPG 1396
++NPV P GGIN TQFRDPTTAW G
Sbjct: 452 AYNPVAAPVGGINATQFRDPTTAWYADG 535
Score = 46.0 bits (94), Expect(3) = 1e-045
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +2 / -3
Query: 1397 PGPRQAVVGSRNCVTLMPPSGTMTGL 1474
P AVVGSRNCV LMPP+G TGL
Sbjct: 534 PSAYHAVVGSRNCVALMPPTGAATGL 457
>gb|CF480720.1|CF480720 POL1_67_B04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_B04_A002 5', mRNA sequence
Length = 742
Score = 181 bits (389), Expect(4) = 3e-065
Identities = 67/89 (75%), Positives = 73/89 (82%)
Frame = -1 / +1
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
V+ + RTGYHFQPPK+WINDPN PMYYKG YH FYQYNPKGAVWGNI WAHSVS DLI+W
Sbjct: 163 VDEMSRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDW 342
Query: 1683 VALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AL+P + PS D GCWSGSATVLP G
Sbjct: 343 TALDPGIYPSKNFDIKGCWSGSATVLPSG 429
Score = 151 bits (324), Expect(3) = 2e-045
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2 / -3
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P GSTVA+PDQQP +S + G GSSA Q +RS DTECAH+MLPHTAPLGLYW*K+WY
Sbjct: 428 PLGSTVAEPDQQPLMSKFLDG*IPGSSAVQSIRSVDTECAHSMLPHTAPLGLYW*KRWYS 249
Query: 1778 PL*YMGALGSLIQFLGGWKWYPV 1846
PL*Y+G GSLIQ GGWKWYPV
Sbjct: 248 PL*YIGPFGSLIQCFGGWKWYPV 180
Score = 70.3 bits (147), Expect(4) = 3e-065
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = -1 / +1
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGI 1444
++QV+N+AYPKN+SDP LREWVKP +NP+I P+ GI
Sbjct: 466 DHQVQNLAYPKNLSDPFLREWVKPDYNPIISPDSGI 573
Score = 47.8 bits (98), Expect(3) = 2e-045
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +2 / -3
Query: 1445 MPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW* 1549
MP SG M GL G THSR +GS+ F G A F TW*
Sbjct: 572 MPLSGEMMGL*SGLTHSRRNGSERFLG*ARFCTW* 468
Score = 39.6 bits (80), Expect(4) = 3e-065
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / +1
Query: 927 AGIQAIPRTVWLDPSGKQLL 868
+GIQAIPR +WL P GKQL+
Sbjct: 565 SGIQAIPRKLWLSPGGKQLI 624
Score = 31.8 bits (63), Expect(3) = 2e-045
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2 / -3
Query: 872 SCFPLGSSHTVLGIAWIP 925
SCFP G SH+ LGIA +P
Sbjct: 620 SCFPPGDSHSFLGIA*MP 567
Score = 26.3 bits (51), Expect(4) = 3e-065
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P++MYTG+D D Q
Sbjct: 427 GMPIVMYTGIDPNDHQVQ 480
>gb|BG560224.1|BG560224 RHIZ2_71_F04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 494
Score = 244 bits (528), Expect(2) = 4e-065
Identities = 90/108 (83%), Positives = 98/108 (90%)
Frame = -1 / +2
Query: 1920 YKDLEAEAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKG 1741
++ LEAEAAAA VP SIV+PLLRTGYHFQPP NWINDPNAPMYYKGWYH FYQYNPKG
Sbjct: 131 HRSLEAEAAAAPPSVPASIVSPLLRTGYHFQPPMNWINDPNAPMYYKGWYHLFYQYNPKG 310
Query: 1740 AVWGNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AVWGNIVWAHS+SRDLINW+ALEPA+ PSIP D+YGCWSGSAT+L DG
Sbjct: 311 AVWGNIVWAHSISRDLINWIALEPAIYPSIPSDQYGCWSGSATMLQDG 454
Score = 186 bits (401), Expect(2) = 2e-046
Identities = 77/94 (81%), Positives = 82/94 (87%)
Frame = +2 / -3
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PS S VA+PDQQPY S GMLG AGSSA QLMRSRD E AHTMLPHTAPLGLYW* + YH
Sbjct: 453 PSCSIVAEPDQQPYWSEGMLG*MAGSSAIQLMRSRDME*AHTMLPHTAPLGLYW*NR*YH 274
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 1879
PL*Y+GALGSLIQF+GGWKWYPVLSRGLTM+ GT
Sbjct: 273 PL*YIGALGSLIQFIGGWKWYPVLSRGLTMEAGT 172
Score = 123 bits (263), Expect = 1e-026
Identities = 56/95 (58%), Positives = 64/95 (67%)
Frame = -3 / +1
Query: 1912 PRSRGCCGDGPGAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRM 1733
P RG G GA +H QPPAQD VP PA ELDQ QR+ VLQG+V +LP+Q QGR M
Sbjct: 139 PGGRGGGGTAVGAGLHCQPPAQDRVPFPAANELDQRPQRSDVLQGMVSPVLPVQPQGRSM 318
Query: 1732 GQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 1628
GQHRVG+L + RPHQL A A +HP R VRLL
Sbjct: 319 GQHRVGSLHITRPHQLDRAGARHLPEHPLRPVRLL 423
Score = 108 bits (230), Expect = 4e-022
Identities = 53/105 (50%), Positives = 62/105 (59%)
Frame = +1 / -2
Query: 1606 QHRRRPGPAAVPVARDAWSERRL*RHPVDEVSRHRVRPHDVAPYGALGIXXXXXXXXXXX 1785
QHRRR PAAV V DA + L R PVDEV+ + V PHDVAPY ALG+
Sbjct: 445 QHRRRARPAAVLVGGDARVDGGLQRDPVDEVA*YGVSPHDVAPYCALGVVLVEQVIPSLV 266
Query: 1786 XHGRVGIIDPVLGGLEVVPRPEQGVDDGRRHLVRRRSSLGFEVLV 1920
H VG++DPV LE+VP PEQG D+G RH R R LG + V
Sbjct: 265 VHRSVGVVDPVHWRLEMVPCPEQGADNGGRHRRRCRRRLGLQAPV 131
Score = 26.7 bits (52), Expect(2) = 4e-065
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 1596 GGPVIMYTGVDHPD 1555
G P I+YTG++ PD
Sbjct: 452 GTPAILYTGINRPD 493
Score = 22.6 bits (43), Expect(2) = 2e-046
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1 / -2
Query: 1885 RRRSSLGFEVLVVVDDMRRSCELQQQQQARR 1977
RRR + VDDM + ELQ+ +Q R
Sbjct: 172 RRRCRRRLGLQAPVDDMGGAGELQRGEQQHR 80
>gb|CX607675.1|CX607675 ANR1_30_C08.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_30_C08_A002 3', mRNA sequence
Length = 743
Score = 209 bits (450), Expect(2) = 6e-065
Identities = 87/104 (83%), Positives = 96/104 (92%)
Frame = -1 / +2
Query: 537 KPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCIL 358
KP VLMCTDPTKSSL+P+LY+PTFAGFVDTDIS+GKI+LRSLIDRSVVESFG G+TCIL
Sbjct: 101 KPKVLMCTDPTKSSLSPDLYKPTFAGFVDTDISSGKIALRSLIDRSVVESFGEKGRTCIL 280
Query: 357 SRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMNGA* 226
SRVYPS+AIGK+A LYVFNNG VKVS LTAWEMKKP+MNGA*
Sbjct: 281 SRVYPSIAIGKEAHLYVFNNGDVDVKVSSLTAWEMKKPLMNGA* 412
Score = 172 bits (370), Expect(2) = 1e-050
Identities = 78/103 (75%), Positives = 83/103 (80%)
Frame = +2 / -3
Query: 230 APFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRS 409
APF++GFFISHAVR DTLT PLL T*R AS PMA DG*T +RMQVLP +PKLSTTDRS
Sbjct: 408 APFISGFFISHAVRLDTLTSTSPLLKT*R*ASFPMAMDG*TRDRMQVLPFSPKLSTTDRS 229
Query: 410 IRLLRDILPFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTTGL 538
I+LLR I P EMSVST PA VG YR G DDLVGSVHMST GL
Sbjct: 228 IKLLRAIFPLEMSVSTKPAKVGLYRSGLSDDLVGSVHMSTLGL 100
Score = 92.3 bits (195), Expect(2) = 8e-021
Identities = 45/95 (47%), Positives = 55/95 (57%)
Frame = -3 / +1
Query: 511 PYQXXXXXXXXXPDICRICRHGHLERQDIPEKPDRPVGR*ELRSRGQDLHPLQGLPVAGH 332
P+Q D+ R+ RH H +R+D K DR V ELR + +DLHP+ GLPV H
Sbjct: 127 PHQVIA*SRSVQADLRRLRRH*HFKREDCS*KLDRSVRGRELRRKRKDLHPVTGLPVHRH 306
Query: 331 RQGRSPLRVQQREGARQGVPSHRVGDEEAGHERGL 227
+G SPLR QQR RQGV +GDEEA ER L
Sbjct: 307 WKGGSPLRFQQR*RGRQGVKPDSMGDEEAADERRL 411
Score = 62.0 bits (129), Expect(2) = 6e-065
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = -1 / +2
Query: 639 RGGVGPFGLWVLASANRKERTAVFFRVFKPAAGDKPVVL 523
+GGVGPFGLWVLASA+ +E+TAVFFRV K G V++
Sbjct: 2 KGGVGPFGLWVLASADLQEKTAVFFRVSKDGYGKPKVLM 118
Score = 51.0 bits (105), Expect(2) = 1e-050
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = +2 / -3
Query: 542 PAAGLNTLKNTAVLSLRLAEASTHSPNGPTPPL 640
P L TLK TAV S + AEA+TH P GPTPPL
Sbjct: 99 P*PSLETLKKTAVFSCKSAEANTHRPKGPTPPL 1
Score = 30.9 bits (61), Expect(2) = 8e-021
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / +3
Query: 614 CGCWPPPTARR 582
CGCWP PT RR
Sbjct: 27 CGCWPLPTCRR 59
>gb|CF483326.1|CF483326 POL1_21_B02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_21_B02_A002 5', mRNA sequence
Length = 660
Score = 153 bits (329), Expect(3) = 4e-062
Identities = 58/80 (72%), Positives = 62/80 (77%)
Frame = -1 / +1
Query: 1836 HFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEPALRP 1657
H PK+W NDPN PMYYKG YH FYQYNPKGAVWGNI WAHSVS DLI+W AL+P + P
Sbjct: 118 HTVYPKHWGNDPNGPMYYKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDWTALDPGIYP 297
Query: 1656 SIPGDRYGCWSGSATVLPDG 1597
S D GCWSGSATVLP G
Sbjct: 298 SKNFDIKGCWSGSATVLPSG 357
Score = 124 bits (266), Expect(2) = 2e-042
Identities = 52/76 (68%), Positives = 59/76 (77%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P GSTVA+PDQQP +S + G GSSA Q +RS DTECAH+MLPHTAPLGLYW*K+WY
Sbjct: 356 PLGSTVAEPDQQPLMSKFLDG*IPGSSAVQSIRSVDTECAHSMLPHTAPLGLYW*KRWYS 177
Query: 1778 PL*YMGALGSLIQFLG 1825
PL*Y+G GSL Q G
Sbjct: 176 PL*YIGPFGSLPQCFG 129
Score = 100 bits (213), Expect(3) = 4e-062
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = -1 / +1
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGP 1399
++QV+N+AYPKN+SDP LREWVKP +NP+I P+ GIN + FRDPTTAW GP
Sbjct: 394 DHQVQNLAYPKNLSDPFLREWVKPDYNPIISPDSGINASAFRDPTTAWLGP 546
Score = 71.2 bits (149), Expect(2) = 2e-042
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +2 / -2
Query: 1361 AALPTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFR 1540
+ L +SR GP QAVVGSR + LMP SG M GL G THSR +GS+ F G A F
Sbjct: 584 STLLPTSRRQCLSGPSQAVVGSRKALALMPLSGEMMGL*SGLTHSRRNGSERFLG*ARFC 405
Query: 1541 TW* 1549
TW*
Sbjct: 404 TW* 396
Score = 26.3 bits (51), Expect(3) = 4e-062
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P++MYTG+D D Q
Sbjct: 355 GMPIVMYTGIDPNDHQVQ 408
>gb|CW070613.1|CW070613 104_321_10526871_1_30090 Sorghum methylation filtered library (LibID:
104) Sorghum bicolor genomic clone 10526871, DNA sequence
Length = 593
Score = 112 bits (239), Expect(4) = 1e-061
Identities = 42/54 (77%), Positives = 47/54 (87%)
Frame = -1 / +1
Query: 1170 KHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFY 1009
K+VLKNSLDL RYDYYT+G+Y R +RY PD+P GD HRLRYDYGNFYASKTFY
Sbjct: 430 KYVLKNSLDLTRYDYYTIGSYDKRKDRYYPDNPNGDYHRLRYDYGNFYASKTFY 591
Score = 75.8 bits (159), Expect(4) = 1e-061
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLREWVKPS 1477
G P I+YTG++ PDINYQV+ +A+PKN SDPLLREW KP+
Sbjct: 28 GTPAILYTGINRPDINYQVQVLAFPKNASDPLLREWEKPA 147
Score = 56.5 bits (117), Expect(4) = 1e-061
Identities = 22/39 (56%), Positives = 24/39 (61%)
Frame = -1 / +1
Query: 1344 RGVAYVYXXXXXXXXXXXXRPLHSAPTGMWECPDFYPVS 1228
RG+A VY PLHSA TGMWECPDF+PVS
Sbjct: 268 RGMAIVYRSRDFRRWTKAKHPLHSALTGMWECPDFFPVS 384
Score = 55.6 bits (115), Expect(4) = 1e-030
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +2 / -1
Query: 1481 GFTHSRSSGSDTFFGYATFRTW*LMSGWSTPVYMITGPP 1597
GF+HSRSSGSD F G A+ TW*LMSG PV I G P
Sbjct: 143 GFSHSRSSGSDAFLGKASTCTW*LMSGRLIPV*RIAGVP 27
Score = 52.4 bits (108), Expect(4) = 1e-061
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -1 / +1
Query: 1479 SHNPVIVPEGGINVTQFRDPTTAWRGPG 1396
++NPV P GGIN TQFRDPTTAW G
Sbjct: 148 AYNPVAAPVGGINATQFRDPTTAWYADG 231
Score = 48.3 bits (99), Expect(4) = 1e-030
Identities = 21/38 (55%), Positives = 21/38 (55%)
Frame = +2 / -1
Query: 1232 TG*KSGHSHIPVGAECSGXXXXXXXXXXXXXYTYATPR 1345
TG KSGHSHIPV AECSG YT A PR
Sbjct: 380 TGKKSGHSHIPVSAECSGCLAFVQRRKSRLRYTIAMPR 267
Score = 46.0 bits (94), Expect(4) = 1e-030
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +2 / -1
Query: 1397 PGPRQAVVGSRNCVTLMPPSGTMTGL 1474
P AVVGSRNCV LMPP+G TGL
Sbjct: 230 PSAYHAVVGSRNCVALMPPTGAATGL 153
Score = 41.8 bits (85), Expect(4) = 1e-030
Identities = 28/55 (50%), Positives = 28/55 (50%)
Frame = +2 / -1
Query: 1007 S*NVLDA*KLPXXXXXXXXXPAGSSGTYRSALGWYVPTVXXXXXXXXXLFLSTCL 1171
S*NVLDA*KLP P G SG YRS L Y P V LFLST L
Sbjct: 593 S*NVLDA*KLP*SYRSRW*SPFGLSG*YRSFLLSYDPMV**SYRVRSRLFLSTYL 429
>gb|CD204267.1|CD204267 HS1_4_A06.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_4_A06_A012 5', mRNA sequence
Length = 602
Score = 173 bits (373), Expect(3) = 1e-061
Identities = 61/72 (84%), Positives = 67/72 (93%)
Frame = -1 / +1
Query: 1812 INDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEPALRPSIPGDRYG 1633
+ DPNAPMYYKGWYH FYQYNPKGAVWGNIVWAHS+SRDLINW+ALEPA+ PSIP D+YG
Sbjct: 334 VADPNAPMYYKGWYHLFYQYNPKGAVWGNIVWAHSISRDLINWIALEPAIYPSIPSDQYG 513
Query: 1632 CWSGSATVLPDG 1597
CWSGSAT+L DG
Sbjct: 514 CWSGSATMLQDG 549
Score = 129 bits (277), Expect(4) = 7e-044
Identities = 56/70 (80%), Positives = 59/70 (84%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PS S VA+PDQQPY S GMLG AGSSA QLMRSRD E AHTMLPHTAPLGLYW* + YH
Sbjct: 548 PSCSIVAEPDQQPYWSEGMLG*MAGSSAIQLMRSRDME*AHTMLPHTAPLGLYW*NR*YH 369
Query: 1778 PL*YMGALGS 1807
PL*Y+GALGS
Sbjct: 368 PL*YIGALGS 339
Score = 79.0 bits (166), Expect(3) = 3e-024
Identities = 35/58 (60%), Positives = 42/58 (72%)
Frame = -3 / +3
Query: 1801 QRAHVLQGVVPFLLPIQSQGRRMGQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 1628
QR+ VLQG+V +LP+Q QGR MGQHRVG+L + RPHQL A A +HP R VRLL
Sbjct: 345 QRSDVLQGMVSPVLPVQPQGRSMGQHRVGSLHITRPHQLDRAGARHLPEHPLRPVRLL 518
Score = 68.0 bits (142), Expect(3) = 1e-061
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = -1 / +2
Query: 1920 YKDLEAEAAAATDQVPPSIVNPLLRTGYHFQPPKNWIN 1807
++ LEAEAAAA VP SIV+PLLRTGYHFQPP N IN
Sbjct: 146 HRSLEAEAAAAPPSVPASIVSPLLRTGYHFQPPMNRIN 259
Score = 58.3 bits (121), Expect(4) = 7e-044
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = +2 / -3
Query: 1805 SLIQFLGGWKWYPVLSRGLTMDGGT 1879
+LI+F+GGWKWYPVLSRGLTM+ GT
Sbjct: 261 ALIRFIGGWKWYPVLSRGLTMEAGT 187
Score = 46.4 bits (95), Expect(3) = 3e-024
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = -3 / +1
Query: 1912 PRSRGCCGDGPGAAVHRQPPAQDGVPLPAPQELDQ 1808
P RG G GA +H QPPAQD VP PA E DQ
Sbjct: 154 PGGRGGGGTAVGAGLHCQPPAQDRVPFPATNEPDQ 258
Score = 36.8 bits (74), Expect(3) = 1e-061
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P I+YTG++ PDINYQ
Sbjct: 547 GTPAILYTGINRPDINYQ 600
Score = 27.2 bits (53), Expect(3) = 3e-024
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / +3
Query: 1579 VHGRGPPGHQLPG 1541
+H PPGHQLPG
Sbjct: 564 LHWDQPPGHQLPG 602
Score = 26.3 bits (51), Expect(4) = 7e-044
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2 / -1
Query: 1541 TW*LMSGWSTPVYMITGPP 1597
TW*LMSG PV I G P
Sbjct: 602 TW*LMSGRLIPV*RIAGVP 546
Score = 22.1 bits (42), Expect(4) = 7e-044
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / -3
Query: 1928 TTCDAPASCNSSS 1966
TT +APASC++ S
Sbjct: 141 TTWEAPASCSAVS 103
>gb|CW298321.1|CW298321 104_780_11462518_116_35647_081 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462518, DNA
sequence
Length = 646
Score = 176 bits (378), Expect(3) = 6e-061
Identities = 64/95 (67%), Positives = 79/95 (83%)
Frame = -1 / -3
Query: 1053 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQ 874
LRYDYGNFYASKTF D AK+RRILWGWANESD+ ADD+ KGWAG+QA+PR VWL P GKQ
Sbjct: 416 LRYDYGNFYASKTFLDTAKQRRILWGWANESDSTADDLRKGWAGVQAVPRKVWLAPDGKQ 237
Query: 873 LLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTGI 769
L+QWP+ E+E+LR V + + ++KAG H EV+G+
Sbjct: 236 LVQWPVAEIESLRGNHVNVTDTLVKAGQHFEVSGL 132
Score = 109 bits (232), Expect(3) = 5e-031
Identities = 52/89 (58%), Positives = 59/89 (66%)
Frame = +2 / +1
Query: 773 PVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLGIAWIPAQPLATSSA 952
P TS CPAL ++ + +T S S+ GHC+SC P G+S T LG A PAQPL SSA
Sbjct: 136 PDTSKCCPALTSVSVTLTWLPRRDSISATGHCTSCLPSGASQTFLGTACTPAQPLRRSSA 315
Query: 953 AVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1039
SDSLA PHRMRR A S NVLDA*KLP
Sbjct: 316 VESDSLAHPHRMRRCFAVSRNVLDA*KLP 402
Score = 50.6 bits (104), Expect(3) = 6e-061
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = -1 / -3
Query: 1170 KHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 1063
KHVLK SLDL R++YYT G Y + YVPD D
Sbjct: 536 KHVLKVSLDLTRFEYYTFGEYDDATDTYVPDAAIAD 429
Score = 49.6 bits (102), Expect(3) = 6e-061
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -1 / -3
Query: 1281 LHSAPTGMWECPDFYPVSKGGAPRAG 1204
LHS TGMWECPDFYPV+ G +G
Sbjct: 626 LHSGDTGMWECPDFYPVNSAGVGVSG 549
Score = 40.5 bits (82), Expect(3) = 5e-031
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +1
Query: 1205 PARGAPPLLTG*KSGHSHIPVGAECS 1282
P P TG*KSGHSH+PV ECS
Sbjct: 550 PLTPTPAEFTG*KSGHSHMPVSPECS 627
Score = 25.8 bits (50), Expect(3) = 5e-031
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2 / +1
Query: 1076 SSGTYRSALGWYVPTVXXXXXXXXXLFLSTC 1168
+SGTY S Y P V L LSTC
Sbjct: 442 ASGTYVSVASSYSPNV*YSNRVKSRLTLSTC 534
>gb|CF484492.1|CF484492 POL1_25_D08.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_25_D08_A002 5', mRNA sequence
Length = 560
Score = 181 bits (389), Expect(3) = 1e-059
Identities = 67/89 (75%), Positives = 73/89 (82%)
Frame = -1 / +1
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
V+ + RTGYHFQPPK+WINDPN PMYYKG YH FYQYNPKGAVWGNI WAHSVS DLI+W
Sbjct: 160 VDEMSRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDW 339
Query: 1683 VALEPALRPSIPGDRYGCWSGSATVLPDG 1597
AL+P + PS D GCWSGSATVLP G
Sbjct: 340 TALDPGIYPSKNFDIKGCWSGSATVLPSG 426
Score = 151 bits (324), Expect(2) = 3e-042
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P GSTVA+PDQQP +S + G GSSA Q +RS DTECAH+MLPHTAPLGLYW*K+WY
Sbjct: 425 PLGSTVAEPDQQPLMSKFLDG*IPGSSAVQSIRSVDTECAHSMLPHTAPLGLYW*KRWYS 246
Query: 1778 PL*YMGALGSLIQFLGGWKWYPV 1846
PL*Y+G GSLIQ GGWKWYPV
Sbjct: 245 PL*YIGPFGSLIQCFGGWKWYPV 177
Score = 64.8 bits (135), Expect(3) = 1e-059
Identities = 22/32 (68%), Positives = 29/32 (90%)
Frame = -1 / +1
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVP 1456
++QV+N+AYPKN+SDP LREWVKP +NP+I P
Sbjct: 463 DHQVQNLAYPKNLSDPFLREWVKPDYNPIISP 558
Score = 43.7 bits (89), Expect(2) = 3e-042
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +2 / -1
Query: 1454 SGTMTGLCEGFTHSRSSGSDTFFGYATFRTW* 1549
SG M GL G THSR +GS+ F G A F TW*
Sbjct: 560 SGEMMGL*SGLTHSRRNGSERFLG*ARFCTW* 465
Score = 26.3 bits (51), Expect(3) = 1e-059
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGVDHPDINYQ 1543
G P++MYTG+D D Q
Sbjct: 424 GMPIVMYTGIDPNDHQVQ 477
>gb|CL151746.1|CL151746 104_334_10779469_114_31361_253 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779469, DNA
sequence
Length = 749
Score = 164 bits (353), Expect(3) = 7e-059
Identities = 62/118 (52%), Positives = 81/118 (68%)
Frame = -1 / +2
Query: 1182 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFYDP 1003
G V+HVLK S+ DYY VGTY A+ + PD+ R D G+ YASKTF+D
Sbjct: 32 GKGVRHVLKVSMPDTLEDYYAVGTYDDGADTFTPDEDGDYRSWRRIDRGHLYASKTFFDA 211
Query: 1002 AKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAK 829
+ RR+LW W NESD+ ADDVA+GW+G+Q+ PR +WLD GKQL+QWP+EE+E LR +
Sbjct: 212 RRSRRVLWAWVNESDSEADDVARGWSGLQSFPRALWLDGGGKQLVQWPVEEIETLRTR 385
Score = 101 bits (215), Expect(3) = 6e-035
Identities = 53/113 (46%), Positives = 58/113 (51%)
Frame = +2 / -3
Query: 836 LSASTSSIGHCSSCFPLGSSHTVLGIAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*N 1015
LS S SS GHC+SCFP SSH+ G W P QP ATSSA++SDS H RR L S N
Sbjct: 378 LSVSISSTGHCTSCFPPPSSHSARGNDWRPDQPRATSSASLSDSFTHAHSTRRLLRASKN 199
Query: 1016 VLDA*KLPXXXXXXXXXPAGSSGTYRSALGWYVPTVXXXXXXXXXLFLSTCLT 1174
VLDA + P SSG SA YVPT L L TC T
Sbjct: 198 VLDAYRCPRSILRQLR*SPSSSGVNVSAPSSYVPTA**SSSVSGMLTLRTCRT 40
Score = 71.6 bits (150), Expect(3) = 7e-059
Identities = 32/56 (57%), Positives = 38/56 (67%)
Frame = -1 / +2
Query: 720 ALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFK 553
+L AE LDP+ D + LC K A VRGGVGPFGL V+AS + E TAVFF VF+
Sbjct: 494 SLGRAEGLDPSRLADPDALCREKGASVRGGVGPFGLLVMASGDLHEHTAVFFXVFR 661
Score = 57.9 bits (120), Expect(3) = 6e-035
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +2 / -3
Query: 554 LNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 664
LNT KNTAV S R EA T SPNGPTPP T A F+ H
Sbjct: 660 LNTXKNTAVCSCRSPEAITSSPNGPTPPRTEAPFSRH 550
Score = 33.1 bits (66), Expect(3) = 7e-059
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -1 / +2
Query: 798 AGHHVEVTGIQTAQADVEVSFEV 730
AG EVTGI+++QADV+V FE+
Sbjct: 422 AGGLREVTGIRSSQADVDVVFEI 490
Score = 29.5 bits (58), Expect(3) = 6e-035
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +2 / -3
Query: 734 SKLTSTSACAVCIPVTST*CPA 799
S TSTSAC + IPVTS PA
Sbjct: 486 SNTTSTSACELRIPVTSRSPPA 421
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,097,200,671
Number of Sequences: 832831
Number of extensions: 32533296
Number of successful extensions: 319320
Number of sequences better than 1.0e-020: 195
length of database: 163,786,556
effective HSP length: 57
effective length of database: 116,315,189
effective search space used: 72929623503
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)