TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478290.2.1
(1343 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN140768.1|CN140768 OX1_46_H12.g1_A002 Oxidatively-stres... 201 5e-098
gb|CN123855.1|CN123855 RHOH1_1_D12.b1_A002 Acid- and alkali... 201 3e-096
gb|CN123943.1|CN123943 RHOH1_1_D12.g1_A002 Acid- and alkali... 201 1e-092
gb|CN140707.1|CN140707 OX1_46_H12.b1_A002 Oxidatively-stres... 166 8e-069
gb|CD430993.1|CD430993 ETH1_6_F10.b1_A002 Ethylene-treated ... 196 9e-069
gb|BG560269.1|BG560269 RHIZ2_72_B09.b1_A003 Rhizome2 (RHIZ2... 147 6e-058
gb|CW476411.1|CW476411 fsbb001f233e09k0 Sorghum methylation... 89 1e-053
gb|CW137415.1|CW137415 104_523_11119279_116_34870_020 Sorgh... 81 3e-051
gb|CW131219.1|CW131219 104_514_11115553_148_34788_013 Sorgh... 89 6e-044
gb|CX606564.1|CX606564 ANR1_3_F03.g1_A002 Anaerobic roots S... 127 1e-042
gb|CN146978.1|CN146978 WOUND1_46_C04.b1_A002 Wounded leaves... 130 2e-039
gb|CN147029.1|CN147029 WOUND1_46_C04.g1_A002 Wounded leaves... 130 2e-039
gb|CW177734.1|CW177734 104_591_11159186_148_36609_011 Sorgh... 91 1e-038
gb|CW243252.1|CW243252 104_703_11219878_148_37569_087 Sorgh... 91 5e-036
gb|CW478392.1|CW478392 fsbb001f236e04f0 Sorghum methylation... 89 2e-035
gb|CW115976.1|CW115976 104_491_11106855_148_34596_058 Sorgh... 75 2e-034
gb|CF756527.1|CF756527 DSAF1_6_C12.b1_A011 Drought-stressed... 127 2e-034
gb|CX606473.1|CX606473 ANR1_3_F03.b1_A002 Anaerobic roots S... 127 6e-034
gb|CW198874.1|CW198874 104_623_11183207_116_36840_084 Sorgh... 130 2e-032
gb|CW082645.1|CW082645 104_424_10943914_114_32383_033 Sorgh... 130 2e-032
gb|CW302565.1|CW302565 104_786_11464786_116_35665_035 Sorgh... 129 1e-030
gb|CW282567.1|CW282567 104_758_11408780_116_35468_070 Sorgh... 125 1e-029
gb|CL197703.1|CL197703 104_424_10943914_114_32334_033 Sorgh... 130 6e-029
gb|CW271545.1|CW271545 104_743_11403054_148_35345_019 Sorgh... 129 8e-029
gb|CF486168.1|CF486168 POL1_36_D06.b1_A002 Pollen Sorghum b... 128 2e-028
gb|CF756608.1|CF756608 DSAF1_6_C12.g1_A011 Drought-stressed... 127 4e-028
gb|CW476410.1|CW476410 fsbb001f233e09f0 Sorghum methylation... 53 1e-026
gb|CW177733.1|CW177733 104_591_11159186_116_36610_011 Sorgh... 83 2e-026
gb|CF483095.1|CF483095 POL1_11_F04.b1_A002 Pollen Sorghum b... 116 1e-024
gb|BF655994.1|BF655994 FM1_42_F02.b1_A003 Floral-Induced Me... 75 2e-024
gb|CW467089.1|CW467089 fsbb001f218k03k0 Sorghum methylation... 113 5e-024
gb|CW319407.1|CW319407 104_812_11474472_116_35887_096 Sorgh... 71 8e-024
gb|CW119569.1|CW119569 104_496_11108842_148_34633_037 Sorgh... 75 3e-023
gb|CW429387.1|CW429387 fsbb001f142j21k0 Sorghum methylation... 61 3e-023
gb|CW111273.1|CW111273 104_484_11104216_116_34532_056 Sorgh... 72 2e-022
gb|CW188122.1|CW188122 104_607_11172854_116_36728_051 Sorgh... 96 2e-022
gb|CW137416.1|CW137416 104_523_11119279_148_34866_020 Sorgh... 89 3e-022
>gb|CN140768.1|CN140768 OX1_46_H12.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_46_H12_A002 5', mRNA sequence
Length = 708
Score = 201 bits (434), Expect(4) = 1e-093
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = +1 / +3
Query: 433 DVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFF 612
DVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFF
Sbjct: 312 DVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFF 491
Query: 613 LKPVRLSDMNKLKPHILKSRCNQEQHQQ 696
LKPVRLSDMNKLKPHILKSRC + HQ+
Sbjct: 492 LKPVRLSDMNKLKPHILKSRCREHNHQE 575
Score = 182 bits (391), Expect(6) = 7e-083
Identities = 76/88 (86%), Positives = 78/88 (88%)
Frame = +3 / +2
Query: 429 SGCGCEPDHHRLLHAWHDRI*PAQEDQGVVVSQRYPGGDHVL*EHSFKDQ*VPGGRS*RV 608
+GCG EPDHHRLLHA HDRI*PAQEDQGVVVSQRYP GDHVL*EHSFKDQ*VPGGRS* V
Sbjct: 308 AGCGSEPDHHRLLHARHDRI*PAQEDQGVVVSQRYPSGDHVL*EHSFKDQ*VPGGRS**V 487
Query: 609 LPKTCAAIRHEQAQAPHTEKQMQPGTAP 692
PKT AIRHEQAQAPHTEKQMQ +P
Sbjct: 488 FPKTSTAIRHEQAQAPHTEKQMQRAQSP 571
Score = 173 bits (372), Expect(4) = 5e-098
Identities = 75/90 (83%), Positives = 77/90 (85%)
Frame = -1 / -3
Query: 665 FSMWGLSLFMSDSRTGFRKNSSAPSSRHLLILEGMFSEDMITTGISLRDDDSLIFLSRSY 486
FSMWGLSLFMSDSRTGFRKNSSAPSSRHLLILEGMFSEDMITTGISLRDDDSLIFLSRSY
Sbjct: 544 FSMWGLSLFMSDSRTGFRKNSSAPSSRHLLILEGMFSEDMITTGISLRDDDSLIFLSRSY 365
Query: 485 PVMPGMQ*SVMIRFXXXXXXXXXXSWCVWT 396
PVMPGMQ*SVMIRF +W+
Sbjct: 364 PVMPGMQ*SVMIRFTATSSWSVWTGTGLWS 275
Score = 165 bits (354), Expect(5) = 3e-080
Identities = 70/77 (90%), Positives = 73/77 (94%)
Frame = -3 / -2
Query: 663 QYVGLELVHV**PHRF*EELVSSFLQAPIDP*RNVLRGHDHHRDISERRRLLDLLEQVIS 484
QYVGLELVHV**P+ F*E+L+SSFLQAPIDP*RNVLRGHDHH DISERRRLLDLLEQVIS
Sbjct: 542 QYVGLELVHV**PYWF*EKLISSFLQAPIDP*RNVLRGHDHHWDISERRRLLDLLEQVIS 363
Query: 483 CHARHAVVCDDQVHSHI 433
CHA HAVVCDDQVH HI
Sbjct: 362 CHAGHAVVCDDQVHCHI 312
Score = 138 bits (295), Expect(4) = 5e-098
Identities = 58/77 (75%), Positives = 64/77 (83%)
Frame = -3 / -2
Query: 393 RNRAVLVMEAQELQRLAPGVDSGHLEGRGLEEPLDELPVREAVVHRQDMERSLCGHRRHD 214
RNRAV+VME+QELQRLAP VDSGHLEGRGLEEPLDELPVRE VVHRQDMERSLCGHRR
Sbjct: 293 RNRAVVVMESQELQRLAP*VDSGHLEGRGLEEPLDELPVRETVVHRQDMERSLCGHRRRR 114
Query: 213 RSKQGSSRAAGKNWGCR 163
R + G S+ + G +
Sbjct: 113 RRRHGRSKQESRAAGSK 63
Score = 136 bits (291), Expect(4) = 3e-045
Identities = 59/64 (92%), Positives = 60/64 (93%)
Frame = -2 / -1
Query: 676 CICFSVCGA*ACSCLIAAQVLGRTRQLLPPGTY*SLKECSQRT*SPPGYL*ETTTP*SS* 497
CICFSVCGA*ACSCLIA VLG+T QLLPPGTY*SLKECSQRT*SP GYL*ETTTP*SS*
Sbjct: 555 CICFSVCGA*ACSCLIAVLVLGKTHQLLPPGTY*SLKECSQRT*SPLGYL*ETTTP*SS* 376
Query: 496 AGHI 485
AGHI
Sbjct: 375 AGHI 364
Score = 127 bits (273), Expect(4) = 1e-093
Identities = 56/66 (84%), Positives = 59/66 (89%)
Frame = +1 / +3
Query: 196 AALFRSVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHD 375
+A+ + AAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHD
Sbjct: 96 SAMAAAAAAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHD 275
Query: 376 QDSTVP 393
S VP
Sbjct: 276 DHSPVP 293
Score = 124 bits (265), Expect(5) = 3e-080
Identities = 54/58 (93%), Positives = 54/58 (93%)
Frame = -1 / -3
Query: 392 GTVLSWSWRPRNCSALLPESTVVTWKEEVLRSLSMSFLSGRLSSTARTWNGVSVATAA 219
GT L SW PRNCSALLPESTVVTWKEEVLRSLSMSFLSGRLSSTARTWNGVSVATAA
Sbjct: 292 GTGLWSSWSPRNCSALLPESTVVTWKEEVLRSLSMSFLSGRLSSTARTWNGVSVATAA 119
Score = 104 bits (221), Expect(4) = 4e-034
Identities = 51/86 (59%), Positives = 51/86 (59%)
Frame = +2 / +1
Query: 434 MWL*T*SSQTTACLA*QDMTCXXXXXXXXXXXXXXXXXCPLRTFLQGSIGAWRKELTSSS 613
MW *T*SSQTTAC A*QDMTC CPLRTFLQGSIGAWRKEL S S
Sbjct: 313 MWQ*T*SSQTTACPA*QDMTCSRRSRSRRLSEISQW*SCPLRTFLQGSIGAWRKELMSFS 492
Query: 614 *NLCGYQXXXXXXXXY*KADATRNST 691
*N GYQ Y*KADA T
Sbjct: 493 *NQYGYQT*TSSSPTY*KADAESTIT 570
Score = 84.9 bits (179), Expect(6) = 7e-083
Identities = 36/49 (73%), Positives = 36/49 (73%)
Frame = +3 / +2
Query: 213 GHGGGGHRDSVXXXXXXXXXXXXEAHREAPQDLFLPSDHCRLREQGAAV 359
G GGGGHRDSV EAHREAPQDLFLPSDHCRLREQGAAV
Sbjct: 113 GGGGGGHRDSVPCPGGGRQSPGQEAHREAPQDLFLPSDHCRLREQGAAV 259
Score = 57.4 bits (119), Expect(4) = 5e-098
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -1
Query: 799 GARFLRCLHPFSCGCLCYRCC 737
GARFLRCL PFSCGC CYRCC
Sbjct: 696 GARFLRCLLPFSCGCCCYRCC 634
Score = 53.8 bits (111), Expect(4) = 3e-045
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -1 / -2
Query: 152 LEEVISCHARHAVVCDDQVHSHI 84
LE+VISCHA HAVVCDDQVH HI
Sbjct: 380 LEQVISCHAGHAVVCDDQVHCHI 312
Score = 50.1 bits (103), Expect(4) = 5e-098
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -2 / -1
Query: 763 CGCLCYRCC*LWGSCVRHCDCHFAGAVPGCICFSVC 656
C C CC W C+ C CHFAGAVPG +C
Sbjct: 654 CCCYRCCCCCSWDYCIPRCCCHFAGAVPGDCALCIC 547
Score = 44.1 bits (90), Expect(4) = 1e-093
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 735 QQQR*HKQPQEKGCRHRRNLAP 800
QQQR* +QPQEKG R RRNLAP
Sbjct: 632 QQQR*QQQPQEKGSRQRRNLAP 697
Score = 43.2 bits (88), Expect(6) = 7e-083
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = +1 / +3
Query: 679 QEQHQQSDSHSGERRNPTISSSDSINNRKRKGAGTEEILPQ 801
Q Q S+S + SSS S +NRKRKGA EEILPQ
Sbjct: 576 QLQQSDSNSEECSNPTSSSSSSGSSSNRKRKGADNEEILPQ 698
Score = 41.8 bits (85), Expect(4) = 4e-034
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +1 / +3
Query: 676 NQEQHQQSDSHSGERRNPTISSSDSINNRKRKGAGTE 786
+QEQ QQSDS+S E NPT SSS S ++ RK G +
Sbjct: 567 HQEQLQQSDSNSEECSNPTSSSSSSGSSSNRKRKGAD 677
Score = 37.7 bits (76), Expect(6) = 7e-083
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +2 / +1
Query: 341 GARRCSSWASMTRTARFL 394
GARRCSSW SMT TA FL
Sbjct: 241 GARRCSSWDSMTTTALFL 294
Score = 36.3 bits (73), Expect(5) = 3e-080
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -3 / -2
Query: 801 LGQDFFGACTLSLAVVYAIAAA 736
LGQDFF C+LSLAV A AAA
Sbjct: 698 LGQDFFVVCSLSLAVAAATAAA 633
Score = 30.4 bits (60), Expect(4) = 1e-093
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +2
Query: 393 SCPHAPAGCGCQ 428
SCPH PAGCG +
Sbjct: 290 SCPHRPAGCGSE 325
Score = 29.9 bits (59), Expect(4) = 3e-045
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -1 / -2
Query: 44 RNRAVLVMEAQELQ 3
RNRAV+VME+QELQ
Sbjct: 293 RNRAVVVMESQELQ 252
Score = 29.0 bits (57), Expect(5) = 3e-080
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2 / -1
Query: 229 PPPP*PIETRQQQSCREEL 173
PPPP PIETR+ ++EL
Sbjct: 114 PPPPWPIETRE*SCRKQEL 58
Score = 29.0 bits (57), Expect(4) = 4e-034
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 212 RSWRRWPQRLRSM 250
R RRWPQRLRSM
Sbjct: 112 RRRRRWPQRLRSM 150
Score = 28.1 bits (55), Expect(6) = 7e-083
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3 / +2
Query: 174 NSSLQLCCCLVSIGHGGGG 230
NS LVSIGHGGGG
Sbjct: 59 NSCFLQLYSLVSIGHGGGG 115
Score = 27.6 bits (54), Expect(6) = 7e-083
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / +1
Query: 380 TARFLLSTRTSWMW 421
T LST+TSWMW
Sbjct: 277 TTALFLSTQTSWMW 318
Score = 27.6 bits (54), Expect(4) = 4e-034
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1 / +3
Query: 379 DSTVPPVHTHQLDVAAN 429
D + PVHT QLDVA N
Sbjct: 276 DHSPVPVHTDQLDVAVN 326
Score = 26.7 bits (52), Expect(4) = 3e-045
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1 / -3
Query: 803 SWGKISSVPAPF 768
+WGKISS+ APF
Sbjct: 700 AWGKISSLSAPF 665
Score = 22.1 bits (42), Expect(5) = 3e-080
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3 / -2
Query: 420 HIQLVRVDRRNRAVLV 373
HIQLV VDR V++
Sbjct: 317 HIQLVCVDRNRAVVVM 270
>gb|CN123855.1|CN123855 RHOH1_1_D12.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_1_D12_A002 3', mRNA sequence
Length = 695
Score = 201 bits (434), Expect(6) = 3e-092
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = +1 / +2
Query: 433 DVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFF 612
DVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFF
Sbjct: 143 DVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFF 322
Query: 613 LKPVRLSDMNKLKPHILKSRCNQEQHQQ 696
LKPVRLSDMNKLKPHILKSRC + HQ+
Sbjct: 323 LKPVRLSDMNKLKPHILKSRCREHNHQE 406
Score = 182 bits (391), Expect(6) = 7e-080
Identities = 76/88 (86%), Positives = 78/88 (88%)
Frame = +3 / +1
Query: 429 SGCGCEPDHHRLLHAWHDRI*PAQEDQGVVVSQRYPGGDHVL*EHSFKDQ*VPGGRS*RV 608
+GCG EPDHHRLLHA HDRI*PAQEDQGVVVSQRYP GDHVL*EHSFKDQ*VPGGRS* V
Sbjct: 139 AGCGSEPDHHRLLHARHDRI*PAQEDQGVVVSQRYPSGDHVL*EHSFKDQ*VPGGRS**V 318
Query: 609 LPKTCAAIRHEQAQAPHTEKQMQPGTAP 692
PKT AIRHEQAQAPHTEKQMQ +P
Sbjct: 319 FPKTSTAIRHEQAQAPHTEKQMQRAQSP 402
Score = 173 bits (372), Expect(6) = 3e-096
Identities = 75/90 (83%), Positives = 77/90 (85%)
Frame = -1 / -3
Query: 665 FSMWGLSLFMSDSRTGFRKNSSAPSSRHLLILEGMFSEDMITTGISLRDDDSLIFLSRSY 486
FSMWGLSLFMSDSRTGFRKNSSAPSSRHLLILEGMFSEDMITTGISLRDDDSLIFLSRSY
Sbjct: 375 FSMWGLSLFMSDSRTGFRKNSSAPSSRHLLILEGMFSEDMITTGISLRDDDSLIFLSRSY 196
Query: 485 PVMPGMQ*SVMIRFXXXXXXXXXXSWCVWT 396
PVMPGMQ*SVMIRF +W+
Sbjct: 195 PVMPGMQ*SVMIRFTATSSWSVWTGTGLWS 106
Score = 165 bits (354), Expect(6) = 2e-073
Identities = 70/77 (90%), Positives = 73/77 (94%)
Frame = -3 / -2
Query: 663 QYVGLELVHV**PHRF*EELVSSFLQAPIDP*RNVLRGHDHHRDISERRRLLDLLEQVIS 484
QYVGLELVHV**P+ F*E+L+SSFLQAPIDP*RNVLRGHDHH DISERRRLLDLLEQVIS
Sbjct: 373 QYVGLELVHV**PYWF*EKLISSFLQAPIDP*RNVLRGHDHHWDISERRRLLDLLEQVIS 194
Query: 483 CHARHAVVCDDQVHSHI 433
CHA HAVVCDDQVH HI
Sbjct: 193 CHAGHAVVCDDQVHCHI 143
Score = 136 bits (291), Expect(5) = 2e-048
Identities = 59/64 (92%), Positives = 60/64 (93%)
Frame = -2 / -1
Query: 676 CICFSVCGA*ACSCLIAAQVLGRTRQLLPPGTY*SLKECSQRT*SPPGYL*ETTTP*SS* 497
CICFSVCGA*ACSCLIA VLG+T QLLPPGTY*SLKECSQRT*SP GYL*ETTTP*SS*
Sbjct: 386 CICFSVCGA*ACSCLIAVLVLGKTHQLLPPGTY*SLKECSQRT*SPLGYL*ETTTP*SS* 207
Query: 496 AGHI 485
AGHI
Sbjct: 206 AGHI 195
Score = 104 bits (221), Expect(4) = 1e-033
Identities = 51/86 (59%), Positives = 51/86 (59%)
Frame = +2 / +3
Query: 434 MWL*T*SSQTTACLA*QDMTCXXXXXXXXXXXXXXXXXCPLRTFLQGSIGAWRKELTSSS 613
MW *T*SSQTTAC A*QDMTC CPLRTFLQGSIGAWRKEL S S
Sbjct: 144 MWQ*T*SSQTTACPA*QDMTCSRRSRSRRLSEISQW*SCPLRTFLQGSIGAWRKELMSFS 323
Query: 614 *NLCGYQXXXXXXXXY*KADATRNST 691
*N GYQ Y*KADA T
Sbjct: 324 *NQYGYQT*TSSSPTY*KADAESTIT 401
Score = 90.0 bits (190), Expect(6) = 3e-096
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = -3 / -2
Query: 393 RNRAVLVMEAQELQRLAPGVDSGHLEGRGLEEPLDELPVRE 271
RNRAV+VME+QELQRLAP VDSGHLEGRGLEEPLDELPVRE
Sbjct: 124 RNRAVVVMESQELQRLAP*VDSGHLEGRGLEEPLDELPVRE 2
Score = 87.7 bits (185), Expect(6) = 3e-092
Identities = 38/41 (92%), Positives = 38/41 (92%)
Frame = +1 / +2
Query: 271 LPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVP 393
LPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHD S VP
Sbjct: 2 LPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDDHSPVP 124
Score = 86.3 bits (182), Expect(6) = 2e-073
Identities = 37/41 (90%), Positives = 37/41 (90%)
Frame = -1 / -3
Query: 392 GTVLSWSWRPRNCSALLPESTVVTWKEEVLRSLSMSFLSGR 270
GT L SW PRNCSALLPESTVVTWKEEVLRSLSMSFLSGR
Sbjct: 123 GTGLWSSWSPRNCSALLPESTVVTWKEEVLRSLSMSFLSGR 1
Score = 66.6 bits (139), Expect(6) = 7e-080
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3 / +1
Query: 282 EAHREAPQDLFLPSDHCRLREQGAAV 359
EAHREAPQDLFLPSDHCRLREQGAAV
Sbjct: 13 EAHREAPQDLFLPSDHCRLREQGAAV 90
Score = 57.4 bits (119), Expect(6) = 3e-096
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -1
Query: 799 GARFLRCLHPFSCGCLCYRCC 737
GARFLRCL PFSCGC CYRCC
Sbjct: 527 GARFLRCLLPFSCGCCCYRCC 465
Score = 57.4 bits (119), Expect(5) = 2e-022
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +3 / +2
Query: 84 DVAVNLIITDYCMPGMTGYDLLQ 152
DVAVNLIITDYCMPGMTGYDLL+
Sbjct: 143 DVAVNLIITDYCMPGMTGYDLLK 211
Score = 53.8 bits (111), Expect(5) = 2e-048
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -1 / -2
Query: 152 LEEVISCHARHAVVCDDQVHSHI 84
LE+VISCHA HAVVCDDQVH HI
Sbjct: 211 LEQVISCHAGHAVVCDDQVHCHI 143
Score = 50.1 bits (103), Expect(6) = 3e-096
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -2 / -1
Query: 763 CGCLCYRCC*LWGSCVRHCDCHFAGAVPGCICFSVC 656
C C CC W C+ C CHFAGAVPG +C
Sbjct: 485 CCCYRCCCCCSWDYCIPRCCCHFAGAVPGDCALCIC 378
Score = 44.1 bits (90), Expect(6) = 3e-092
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 735 QQQR*HKQPQEKGCRHRRNLAP 800
QQQR* +QPQEKG R RRNLAP
Sbjct: 463 QQQR*QQQPQEKGSRQRRNLAP 528
Score = 43.7 bits (89), Expect(6) = 3e-096
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -2 / -1
Query: 940 FTDSVPFCKSRANIYVTNQ*AK 875
FTDS+ FCKS ANIYV NQ*AK
Sbjct: 692 FTDSIIFCKSSANIYVINQ*AK 627
Score = 43.2 bits (88), Expect(6) = 7e-080
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = +1 / +2
Query: 679 QEQHQQSDSHSGERRNPTISSSDSINNRKRKGAGTEEILPQ 801
Q Q S+S + SSS S +NRKRKGA EEILPQ
Sbjct: 407 QLQQSDSNSEECSNPTSSSSSSGSSSNRKRKGADNEEILPQ 529
Score = 41.8 bits (85), Expect(4) = 1e-033
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +1 / +2
Query: 676 NQEQHQQSDSHSGERRNPTISSSDSINNRKRKGAGTE 786
+QEQ QQSDS+S E NPT SSS S ++ RK G +
Sbjct: 398 HQEQLQQSDSNSEECSNPTSSSSSSGSSSNRKRKGAD 508
Score = 41.4 bits (84), Expect(6) = 3e-092
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2 / +3
Query: 875 FGLLICNVDVSPGFAKRNGICK 940
FGLLI N+D+S FAK NGICK
Sbjct: 627 FGLLIYNIDISTRFAKYNGICK 692
Score = 37.7 bits (76), Expect(6) = 7e-080
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +2 / +3
Query: 341 GARRCSSWASMTRTARFL 394
GARRCSSW SMT TA FL
Sbjct: 72 GARRCSSWDSMTTTALFL 125
Score = 36.8 bits (74), Expect(5) = 2e-022
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1 / +2
Query: 736 SSSDSINNRKRKGAGTEEILPQLANRSRHS*LRTD*Y 846
SSS ++ +++ E + ANRSRHS*L+TD*Y
Sbjct: 461 SSSSGSSSNRKRKGADNEEILPQANRSRHS*LQTD*Y 571
Score = 36.3 bits (73), Expect(6) = 7e-080
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 876 LAY*FVT*MLALDLQNGTESV 938
LAY*F+T*+LALDLQN ESV
Sbjct: 628 LAY*FIT*ILALDLQNIMESV 690
Score = 36.3 bits (73), Expect(6) = 2e-073
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -3 / -2
Query: 801 LGQDFFGACTLSLAVVYAIAAA 736
LGQDFF C+LSLAV A AAA
Sbjct: 529 LGQDFFVVCSLSLAVAAATAAA 464
Score = 35.4 bits (71), Expect(5) = 2e-022
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3 / +1
Query: 663 EKQMQPGTAPAK*QSQWRTQEPHNQQQR*HKQPQ 764
++ PGTAPAK*Q Q Q H QQQ+ Q Q
Sbjct: 385 QRAQSPGTAPAK*QQQRGMQ*SHEQQQQQR*QQQ 486
Score = 34.5 bits (69), Expect(6) = 3e-096
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -2
Query: 861 EKVLAVLVSSQLTVP*SVC 805
EK LAVLVS QLT+P*SVC
Sbjct: 586 EKRLAVLVSLQLTMP*SVC 530
Score = 33.1 bits (66), Expect(6) = 2e-073
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / -1
Query: 871 K*KRKGFSCTSQFSVNCALICLP 803
K RK S TSQF+ N ALICLP
Sbjct: 596 KENRKKVSGTSQFAANYALICLP 528
Score = 30.9 bits (61), Expect(4) = 1e-033
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 1 RCSSWASMTRTARFL 45
RCSSW SMT TA FL
Sbjct: 81 RCSSWDSMTTTALFL 125
Score = 30.4 bits (60), Expect(6) = 3e-092
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +2 / +3
Query: 806 QTDQGTVN*ELTSTAKTFSFSL 871
QTDQG V+ +LTSTA FS L
Sbjct: 531 QTDQGIVSCKLTSTANLFSVFL 596
Score = 30.4 bits (60), Expect(6) = 3e-092
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 393 SCPHAPAGCGCQ 428
SCPH PAGCG +
Sbjct: 121 SCPHRPAGCGSE 156
Score = 30.4 bits (60), Expect(4) = 1e-033
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / +1
Query: 44 SCPHAPAGCGCQ 79
SCPH PAGCG +
Sbjct: 121 SCPHRPAGCGSE 156
Score = 29.9 bits (59), Expect(5) = 2e-048
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -1 / -2
Query: 44 RNRAVLVMEAQELQ 3
RNRAV+VME+QELQ
Sbjct: 124 RNRAVVVMESQELQ 83
Score = 29.0 bits (57), Expect(5) = 2e-048
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1 / -3
Query: 845 Y*SVLS*LCLDLFA 804
Y*SV S*LCLDLFA
Sbjct: 570 Y*SVCS*LCLDLFA 529
Score = 28.6 bits (56), Expect(5) = 2e-022
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3 / +2
Query: 3 LQFLGLHDQDSTVP 44
LQFLGLHD S VP
Sbjct: 83 LQFLGLHDDHSPVP 124
Score = 28.6 bits (56), Expect(6) = 2e-073
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3 / -2
Query: 939 LQIPFRFANPGLTSTLQISKPK 874
LQIP FAN L S L IS+PK
Sbjct: 691 LQIPLYFANLVLISML*ISRPK 626
Score = 27.6 bits (54), Expect(5) = 2e-022
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3 / +2
Query: 30 DSTVPPVHTHQLDVAAN 80
D + PVHT QLDVA N
Sbjct: 107 DHSPVPVHTDQLDVAVN 157
Score = 27.6 bits (54), Expect(6) = 7e-080
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / +3
Query: 380 TARFLLSTRTSWMW 421
T LST+TSWMW
Sbjct: 108 TTALFLSTQTSWMW 149
Score = 26.7 bits (52), Expect(5) = 2e-048
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1 / -3
Query: 803 SWGKISSVPAPF 768
+WGKISS+ APF
Sbjct: 531 AWGKISSLSAPF 496
Score = 22.1 bits (42), Expect(6) = 2e-073
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3 / -2
Query: 420 HIQLVRVDRRNRAVLV 373
HIQLV VDR V++
Sbjct: 148 HIQLVCVDRNRAVVVM 101
>gb|CN123943.1|CN123943 RHOH1_1_D12.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_1_D12_A002 5', mRNA sequence
Length = 721
Score = 201 bits (434), Expect(4) = 1e-092
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = +1 / +3
Query: 433 DVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFF 612
DVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFF
Sbjct: 360 DVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFF 539
Query: 613 LKPVRLSDMNKLKPHILKSRCNQEQHQQ 696
LKPVRLSDMNKLKPHILKSRC + HQ+
Sbjct: 540 LKPVRLSDMNKLKPHILKSRCREHNHQE 623
Score = 182 bits (391), Expect(6) = 4e-079
Identities = 76/88 (86%), Positives = 78/88 (88%)
Frame = +3 / +2
Query: 429 SGCGCEPDHHRLLHAWHDRI*PAQEDQGVVVSQRYPGGDHVL*EHSFKDQ*VPGGRS*RV 608
+GCG EPDHHRLLHA HDRI*PAQEDQGVVVSQRYP GDHVL*EHSFKDQ*VPGGRS* V
Sbjct: 356 AGCGSEPDHHRLLHARHDRI*PAQEDQGVVVSQRYPSGDHVL*EHSFKDQ*VPGGRS**V 535
Query: 609 LPKTCAAIRHEQAQAPHTEKQMQPGTAP 692
PKT AIRHEQAQAPHTEKQMQ +P
Sbjct: 536 FPKTSTAIRHEQAQAPHTEKQMQRAQSP 619
Score = 173 bits (372), Expect(3) = 2e-086
Identities = 75/90 (83%), Positives = 77/90 (85%)
Frame = -1 / -1
Query: 665 FSMWGLSLFMSDSRTGFRKNSSAPSSRHLLILEGMFSEDMITTGISLRDDDSLIFLSRSY 486
FSMWGLSLFMSDSRTGFRKNSSAPSSRHLLILEGMFSEDMITTGISLRDDDSLIFLSRSY
Sbjct: 592 FSMWGLSLFMSDSRTGFRKNSSAPSSRHLLILEGMFSEDMITTGISLRDDDSLIFLSRSY 413
Query: 485 PVMPGMQ*SVMIRFXXXXXXXXXXSWCVWT 396
PVMPGMQ*SVMIRF +W+
Sbjct: 412 PVMPGMQ*SVMIRFTATSSWSVWTGTGLWS 323
Score = 165 bits (354), Expect(5) = 5e-081
Identities = 70/77 (90%), Positives = 73/77 (94%)
Frame = -3 / -3
Query: 663 QYVGLELVHV**PHRF*EELVSSFLQAPIDP*RNVLRGHDHHRDISERRRLLDLLEQVIS 484
QYVGLELVHV**P+ F*E+L+SSFLQAPIDP*RNVLRGHDHH DISERRRLLDLLEQVIS
Sbjct: 590 QYVGLELVHV**PYWF*EKLISSFLQAPIDP*RNVLRGHDHHWDISERRRLLDLLEQVIS 411
Query: 483 CHARHAVVCDDQVHSHI 433
CHA HAVVCDDQVH HI
Sbjct: 410 CHAGHAVVCDDQVHCHI 360
Score = 138 bits (295), Expect(3) = 2e-086
Identities = 58/77 (75%), Positives = 64/77 (83%)
Frame = -3 / -3
Query: 393 RNRAVLVMEAQELQRLAPGVDSGHLEGRGLEEPLDELPVREAVVHRQDMERSLCGHRRHD 214
RNRAV+VME+QELQRLAP VDSGHLEGRGLEEPLDELPVRE VVHRQDMERSLCGHRR
Sbjct: 341 RNRAVVVMESQELQRLAP*VDSGHLEGRGLEEPLDELPVRETVVHRQDMERSLCGHRRRR 162
Query: 213 RSKQGSSRAAGKNWGCR 163
R + G S+ + G +
Sbjct: 161 RRRHGRSKQESRAAGSK 111
Score = 136 bits (291), Expect(3) = 7e-043
Identities = 59/64 (92%), Positives = 60/64 (93%)
Frame = -2 / -2
Query: 676 CICFSVCGA*ACSCLIAAQVLGRTRQLLPPGTY*SLKECSQRT*SPPGYL*ETTTP*SS* 497
CICFSVCGA*ACSCLIA VLG+T QLLPPGTY*SLKECSQRT*SP GYL*ETTTP*SS*
Sbjct: 603 CICFSVCGA*ACSCLIAVLVLGKTHQLLPPGTY*SLKECSQRT*SPLGYL*ETTTP*SS* 424
Query: 496 AGHI 485
AGHI
Sbjct: 423 AGHI 412
Score = 127 bits (273), Expect(4) = 1e-092
Identities = 56/66 (84%), Positives = 59/66 (89%)
Frame = +1 / +3
Query: 196 AALFRSVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHD 375
+A+ + AAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHD
Sbjct: 144 SAMAAAAAAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHD 323
Query: 376 QDSTVP 393
S VP
Sbjct: 324 DHSPVP 341
Score = 124 bits (265), Expect(5) = 5e-081
Identities = 54/58 (93%), Positives = 54/58 (93%)
Frame = -1 / -1
Query: 392 GTVLSWSWRPRNCSALLPESTVVTWKEEVLRSLSMSFLSGRLSSTARTWNGVSVATAA 219
GT L SW PRNCSALLPESTVVTWKEEVLRSLSMSFLSGRLSSTARTWNGVSVATAA
Sbjct: 340 GTGLWSSWSPRNCSALLPESTVVTWKEEVLRSLSMSFLSGRLSSTARTWNGVSVATAA 167
Score = 104 bits (221), Expect(4) = 4e-030
Identities = 51/86 (59%), Positives = 51/86 (59%)
Frame = +2 / +1
Query: 434 MWL*T*SSQTTACLA*QDMTCXXXXXXXXXXXXXXXXXCPLRTFLQGSIGAWRKELTSSS 613
MW *T*SSQTTAC A*QDMTC CPLRTFLQGSIGAWRKEL S S
Sbjct: 361 MWQ*T*SSQTTACPA*QDMTCSRRSRSRRLSEISQW*SCPLRTFLQGSIGAWRKELMSFS 540
Query: 614 *NLCGYQXXXXXXXXY*KADATRNST 691
*N GYQ Y*KADA T
Sbjct: 541 *NQYGYQT*TSSSPTY*KADAESTIT 618
Score = 84.9 bits (179), Expect(6) = 4e-079
Identities = 36/49 (73%), Positives = 36/49 (73%)
Frame = +3 / +2
Query: 213 GHGGGGHRDSVXXXXXXXXXXXXEAHREAPQDLFLPSDHCRLREQGAAV 359
G GGGGHRDSV EAHREAPQDLFLPSDHCRLREQGAAV
Sbjct: 161 GGGGGGHRDSVPCPGGGRQSPGQEAHREAPQDLFLPSDHCRLREQGAAV 307
Score = 53.8 bits (111), Expect(3) = 7e-043
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -1 / -3
Query: 152 LEEVISCHARHAVVCDDQVHSHI 84
LE+VISCHA HAVVCDDQVH HI
Sbjct: 428 LEQVISCHAGHAVVCDDQVHCHI 360
Score = 50.1 bits (103), Expect(3) = 2e-086
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -2 / -2
Query: 763 CGCLCYRCC*LWGSCVRHCDCHFAGAVPGCICFSVC 656
C C CC W C+ C CHFAGAVPG +C
Sbjct: 702 CCCYRCCCCCSWDYCIPRCCCHFAGAVPGDCALCIC 595
Score = 40.9 bits (83), Expect(4) = 1e-092
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +1 / +3
Query: 676 NQEQHQQSDSHSGERRNPTISSSDSINNRKRKGAG 780
+QEQ QQSDS+S E NPT SSS S ++ RK G
Sbjct: 615 HQEQLQQSDSNSEECSNPTSSSSSSGSSSNRKRKG 719
Score = 39.1 bits (79), Expect(5) = 5e-081
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 772 PFSCGCLCYRCC 737
PFSCGC CYRCC
Sbjct: 717 PFSCGCCCYRCC 682
Score = 37.7 bits (76), Expect(6) = 4e-079
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +2 / +1
Query: 341 GARRCSSWASMTRTARFL 394
GARRCSSW SMT TA FL
Sbjct: 289 GARRCSSWDSMTTTALFL 342
Score = 30.4 bits (60), Expect(6) = 4e-079
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2 / +1
Query: 677 TRNSTSKVTVTVANAGTPQSXXXXXXXXXRER 772
TRNS+SKVT T NA P++ R
Sbjct: 616 TRNSSSKVTATARNAVIPRAAAAAAVAAATAR 711
Score = 30.4 bits (60), Expect(4) = 1e-092
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +2
Query: 393 SCPHAPAGCGCQ 428
SCPH PAGCG +
Sbjct: 338 SCPHRPAGCGSE 373
Score = 29.9 bits (59), Expect(3) = 7e-043
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -1 / -3
Query: 44 RNRAVLVMEAQELQ 3
RNRAV+VME+QELQ
Sbjct: 341 RNRAVVVMESQELQ 300
Score = 29.0 bits (57), Expect(5) = 5e-081
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2 / -2
Query: 229 PPPP*PIETRQQQSCREEL 173
PPPP PIETR+ ++EL
Sbjct: 162 PPPPWPIETRE*SCRKQEL 106
Score = 29.0 bits (57), Expect(4) = 4e-030
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 212 RSWRRWPQRLRSM 250
R RRWPQRLRSM
Sbjct: 160 RRRRRWPQRLRSM 198
Score = 28.1 bits (55), Expect(4) = 4e-030
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1 / +3
Query: 679 QEQHQQSDSHSGERRNPTISSSDSINNRKRKG 774
Q Q S+S + SSS S +NRKRKG
Sbjct: 624 QLQQSDSNSEECSNPTSSSSSSGSSSNRKRKG 719
Score = 28.1 bits (55), Expect(6) = 4e-079
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3 / +2
Query: 174 NSSLQLCCCLVSIGHGGGG 230
NS LVSIGHGGGG
Sbjct: 107 NSCFLQLYSLVSIGHGGGG 163
Score = 27.6 bits (54), Expect(6) = 4e-079
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / +1
Query: 380 TARFLLSTRTSWMW 421
T LST+TSWMW
Sbjct: 325 TTALFLSTQTSWMW 366
Score = 27.6 bits (54), Expect(4) = 4e-030
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1 / +3
Query: 379 DSTVPPVHTHQLDVAAN 429
D + PVHT QLDVA N
Sbjct: 324 DHSPVPVHTDQLDVAVN 374
Score = 22.1 bits (42), Expect(5) = 5e-081
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3 / -3
Query: 420 HIQLVRVDRRNRAVLV 373
HIQLV VDR V++
Sbjct: 365 HIQLVCVDRNRAVVVM 318
>gb|CN140707.1|CN140707 OX1_46_H12.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_46_H12_A002 3', mRNA sequence
Length = 541
Score = 166 bits (356), Expect(4) = 2e-061
Identities = 69/76 (90%), Positives = 71/76 (93%)
Frame = +1 / +2
Query: 469 MPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVRLSDMNKL 648
MPGMTGY LLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPV LSDMNKL
Sbjct: 2 MPGMTGYALLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVGLSDMNKL 181
Query: 649 KPHILKSRCNQEQHQQ 696
KPHILKSRC + HQ+
Sbjct: 182 KPHILKSRCREHNHQE 229
Score = 147 bits (316), Expect(5) = 8e-069
Identities = 61/66 (92%), Positives = 65/66 (98%)
Frame = -1 / -2
Query: 665 FSMWGLSLFMSDSRTGFRKNSSAPSSRHLLILEGMFSEDMITTGISLRDDDSLIFLSRSY 486
F+MWGLSLFMS+S TGF+KNSSAPSSRHLLILEGMFSEDMITTGISLRDDDSLIFLSR+Y
Sbjct: 198 FNMWGLSLFMSESPTGFKKNSSAPSSRHLLILEGMFSEDMITTGISLRDDDSLIFLSRAY 19
Query: 485 PVMPGM 468
PVMPGM
Sbjct: 18 PVMPGM 1
Score = 138 bits (297), Expect(3) = 1e-046
Identities = 61/75 (81%), Positives = 62/75 (82%)
Frame = +3 / +1
Query: 468 HAWHDRI*PAQEDQGVVVSQRYPGGDHVL*EHSFKDQ*VPGGRS*RVLPKTCAAIRHEQA 647
HA HDRI PAQEDQGVVVSQRYP GDHVL*EHSFKDQ*VPGGRS* V KT A RHEQA
Sbjct: 1 HARHDRICPAQEDQGVVVSQRYPSGDHVL*EHSFKDQ*VPGGRS**VFLKTSRAFRHEQA 180
Query: 648 QAPHTEKQMQPGTAP 692
QAPH EKQMQ +P
Sbjct: 181 QAPHIEKQMQRAQSP 225
Score = 131 bits (281), Expect(4) = 5e-045
Identities = 57/65 (87%), Positives = 60/65 (92%)
Frame = -3 / -1
Query: 663 QYVGLELVHV**PHRF*EELVSSFLQAPIDP*RNVLRGHDHHRDISERRRLLDLLEQVIS 484
QYVGLELVHV* P+ F*E+L+SSFLQAPIDP*RNVLRGHDHH DISERRRLLDLLEQ IS
Sbjct: 196 QYVGLELVHV*KPYWF*EKLISSFLQAPIDP*RNVLRGHDHHWDISERRRLLDLLEQGIS 17
Query: 483 CHARH 469
CHA H
Sbjct: 16 CHAGH 2
Score = 128 bits (274), Expect(5) = 6e-038
Identities = 56/64 (87%), Positives = 58/64 (90%)
Frame = -2 / -3
Query: 676 CICFSVCGA*ACSCLIAAQVLGRTRQLLPPGTY*SLKECSQRT*SPPGYL*ETTTP*SS* 497
CICFS+CGA*ACSCL A VL +T QLLPPGTY*SLKECSQRT*SP GYL*ETTTP*SS*
Sbjct: 209 CICFSICGA*ACSCLKALLVLRKTHQLLPPGTY*SLKECSQRT*SPLGYL*ETTTP*SS* 30
Query: 496 AGHI 485
AGHI
Sbjct: 29 AGHI 18
Score = 57.4 bits (119), Expect(5) = 8e-069
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -3
Query: 799 GARFLRCLHPFSCGCLCYRCC 737
GARFLRCL PFSCGC CYRCC
Sbjct: 350 GARFLRCLLPFSCGCCCYRCC 288
Score = 51.0 bits (105), Expect(4) = 2e-061
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2 / +3
Query: 875 FGLLICNVDVSPGFAKRNGICKLILLESNR 964
FGLLI N+D+S FAK NG CK ILLESN+
Sbjct: 450 FGLLIYNIDISTRFAKYNGTCKRILLESNQ 539
Score = 50.1 bits (103), Expect(5) = 8e-069
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -2 / -3
Query: 763 CGCLCYRCC*LWGSCVRHCDCHFAGAVPGCICFSVC 656
C C CC W C+ C CHFAGAVPG +C
Sbjct: 308 CCCYRCCCCCSWDYCIPRCCCHFAGAVPGDCALCIC 201
Score = 48.7 bits (100), Expect(5) = 8e-069
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -2 / -3
Query: 955 LKQYQFTDSVPFCKSRANIYVTNQ*AK 875
LKQY FT S+ FCKS ANIYV NQ*AK
Sbjct: 530 LKQYPFTCSIIFCKSSANIYVINQ*AK 450
Score = 47.8 bits (98), Expect(4) = 2e-061
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +3 / +1
Query: 735 QQQR*HKQPQEKGCRHRRNLAP 800
QQQR* +QPQEKG RHRRNLAP
Sbjct: 286 QQQR*QQQPQEKGSRHRRNLAP 351
Score = 45.5 bits (93), Expect(3) = 1e-046
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +3 / +1
Query: 876 LAY*FVT*MLALDLQNGTESVN*YCLSRI 962
LAY*F+T*+LALDLQN E V YCLS+I
Sbjct: 451 LAY*FIT*ILALDLQNIMEHVKGYCLSQI 537
Score = 42.8 bits (87), Expect(3) = 1e-046
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = +1 / +2
Query: 679 QEQHQQSDSHSGERRNPTISSSDSINNRKRKGAGTEEILPQ 801
Q Q S+S + SSS S +NRKRKGA EEILPQ
Sbjct: 230 QLQQSDSNSEECSNPTSSSSSSGSSSNRKRKGADIEEILPQ 352
Score = 37.7 bits (76), Expect(4) = 5e-045
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = -3 / -1
Query: 960 FDSSSISLQIPFRFANPGLTSTLQISKPK 874
FDSSSI L +P FAN L S L IS+PK
Sbjct: 535 FDSSSILLHVPLYFANLVLISML*ISRPK 449
Score = 37.3 bits (75), Expect(4) = 5e-045
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -3 / -1
Query: 801 LGQDFFGACTLSLAVVYAIAAA 736
LGQDFF C+LSLAV A AAA
Sbjct: 352 LGQDFFDVCSLSLAVAAATAAA 287
Score = 34.5 bits (69), Expect(5) = 8e-069
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -1
Query: 861 EKVLAVLVSSQLTVP*SVC 805
EK LAVLVS QLT+P*SVC
Sbjct: 409 EKRLAVLVSLQLTMP*SVC 353
Score = 33.1 bits (66), Expect(4) = 5e-045
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / -3
Query: 871 K*KRKGFSCTSQFSVNCALICLP 803
K RK S TSQF+ N ALICLP
Sbjct: 419 KENRKKVSGTSQFAANYALICLP 351
Score = 30.4 bits (60), Expect(4) = 2e-061
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +2 / +3
Query: 806 QTDQGTVN*ELTSTAKTFSFSL 871
QTDQG V+ +LTSTA FS L
Sbjct: 354 QTDQGIVSCKLTSTANLFSVFL 419
Score = 29.0 bits (57), Expect(5) = 6e-038
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1 / -2
Query: 845 Y*SVLS*LCLDLFA 804
Y*SV S*LCLDLFA
Sbjct: 393 Y*SVCS*LCLDLFA 352
Score = 29.0 bits (57), Expect(5) = 6e-038
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -1 / -2
Query: 965 IDSTQAVSVYRFRSVLQIQG*HLRY 891
+D TQAVS Y F +LQI *+L Y
Sbjct: 540 LDLTQAVSFYMFHYILQI*C*YLCY 466
Score = 26.7 bits (52), Expect(5) = 6e-038
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1 / -2
Query: 803 SWGKISSVPAPF 768
+WGKISS+ APF
Sbjct: 354 AWGKISSMSAPF 319
Score = 24.4 bits (47), Expect(5) = 6e-038
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / -2
Query: 145 RSYPVMPGM 119
R+YPVMPGM
Sbjct: 27 RAYPVMPGM 1
>gb|CD430993.1|CD430993 ETH1_6_F10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_F10_A002 3', mRNA sequence
Length = 713
Score = 196 bits (422), Expect(3) = 9e-069
Identities = 83/108 (76%), Positives = 90/108 (83%)
Frame = +1 / +1
Query: 433 DVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFF 612
DVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFF
Sbjct: 97 DVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFF 276
Query: 613 LKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSIN 756
LKPVRLSDM+KLKPHILKSRC + Q + + + + S+ N
Sbjct: 277 LKPVRLSDMSKLKPHILKSRCREHSQQDQEQQHQQSDSNSNDCSNPTN 420
Score = 166 bits (357), Expect(6) = 1e-064
Identities = 71/74 (95%), Positives = 72/74 (97%)
Frame = -1 / -1
Query: 665 FSMWGLSLFMSDSRTGFRKNSSAPSSRHLLILEGMFSEDMITTGISLRDDDSLIFLSRSY 486
FSMWGLSL MSDSRTGFRKNSSAPSSRHLLILEGMFS+DMITTGISLRDDDSLIF SRSY
Sbjct: 329 FSMWGLSLLMSDSRTGFRKNSSAPSSRHLLILEGMFSDDMITTGISLRDDDSLIFFSRSY 150
Query: 485 PVMPGMQ*SVMIRF 444
PVMPGMQ*SVMIRF
Sbjct: 149 PVMPGMQ*SVMIRF 108
Score = 162 bits (349), Expect(4) = 1e-057
Identities = 67/83 (80%), Positives = 73/83 (87%)
Frame = +3 / +3
Query: 429 SGCGCEPDHHRLLHAWHDRI*PAQEDQGVVVSQRYPGGDHVL*EHSFKDQ*VPGGRS*RV 608
+GCG EPDHH LLHA HDR+* A+EDQG+VVS RYPG DHV+*EH FKDQ*+PGGRS RV
Sbjct: 93 AGCGGEPDHHGLLHARHDRV*SAKEDQGIVVS*RYPGRDHVV*EHPFKDQ*MPGGRSGRV 272
Query: 609 LPKTCAAIRHEQAQAPHTEKQMQ 677
PKT AAIRHEQAQAPHTEKQMQ
Sbjct: 273 FPKTSAAIRHEQAQAPHTEKQMQ 341
Score = 138 bits (295), Expect(3) = 2e-045
Identities = 61/77 (79%), Positives = 65/77 (84%)
Frame = -3 / -3
Query: 663 QYVGLELVHV**PHRF*EELVSSFLQAPIDP*RNVLRGHDHHRDISERRRLLDLLEQVIS 484
QYVGLEL HV**PH F*E+LV SFLQA IDP*R+VLR HDH RDIS+RRR LDLL Q+I
Sbjct: 327 QYVGLELAHV**PHWF*EKLVRSFLQASIDP*RDVLRRHDHDRDISKRRRFLDLL*QIIP 148
Query: 483 CHARHAVVCDDQVHSHI 433
CHA HAVV DDQVH HI
Sbjct: 147 CHAGHAVVRDDQVHRHI 97
Score = 119 bits (254), Expect(4) = 4e-040
Identities = 53/63 (84%), Positives = 54/63 (85%)
Frame = -2 / -2
Query: 676 CICFSVCGA*ACSCLIAAQVLGRTRQLLPPGTY*SLKECSQRT*SPPGYL*ETTTP*SS* 497
CICFSVCGA*ACSCLIAA VLG+TR LLPPG Y*SLK CSQ T*S PGYL*ETT P*SS
Sbjct: 340 CICFSVCGA*ACSCLIAALVLGKTRPLLPPGIY*SLKGCSQTT*SRPGYL*ETTIP*SSL 161
Query: 496 AGH 488
A H
Sbjct: 160 ADH 152
Score = 67.5 bits (141), Expect(3) = 9e-069
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = +1 / +1
Query: 319 QVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
QVTTVDSGSKALQFLG+HD D++ V+ HQLDVA N
Sbjct: 1 QVTTVDSGSKALQFLGIHDDDASTVSVYAHQLDVAVN 111
Score = 63.8 bits (133), Expect(5) = 5e-035
Identities = 29/43 (67%), Positives = 29/43 (67%)
Frame = +2 / +2
Query: 548 CPLRTFLQGSIGAWRKELTSSS*NLCGYQXXXXXXXXY*KADA 676
C LRT LQGSI AWRKE TS S*N CGYQ Y*KADA
Sbjct: 212 CRLRTSLQGSIDAWRKERTSFS*NQCGYQT*ASSSPTY*KADA 340
Score = 57.4 bits (119), Expect(5) = 5e-035
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +3 / +1
Query: 84 DVAVNLIITDYCMPGMTGYDLLQ 152
DVAVNLIITDYCMPGMTGYDLL+
Sbjct: 97 DVAVNLIITDYCMPGMTGYDLLK 165
Score = 51.9 bits (107), Expect(6) = 1e-064
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = -3 / -3
Query: 420 HIQLVRVDRRNRAVLVMEAQELQRLAPGVDSGHL 319
HIQLVRV+R V+V++ QELQ APG+DSG+L
Sbjct: 102 HIQLVRVNRDRAGVVVVDPQELQGFAPGIDSGYL 1
Score = 48.3 bits (99), Expect(3) = 2e-045
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = -1 / -1
Query: 410 WCVWTGGTVLSWSWRPRNCSALLPESTVVT 321
WC T + S SW P+NC ALLPESTVVT
Sbjct: 92 WCA*TETVLASSSWIPKNCRALLPESTVVT 3
Score = 44.6 bits (91), Expect(4) = 1e-057
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +2 / +2
Query: 341 GARRCSSWASMTRTARFLLSTRTSWMW 421
GA+ CSSW S T T L TRTSWMW
Sbjct: 23 GAKPCSSWGSTTTTPARSLFTRTSWMW 103
Score = 43.7 bits (89), Expect(5) = 5e-035
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3 / +1
Query: 3 LQFLGLHDQDSTVPPVHTHQLDVAAN 80
LQFLG+HD D++ V+ HQLDVA N
Sbjct: 34 LQFLGIHDDDASTVSVYAHQLDVAVN 111
Score = 43.2 bits (88), Expect(3) = 9e-069
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2 / +3
Query: 863 FSLYFGLLICNVDVSPGFAKRNGICKLILLESNR 964
F + FGLLICN DV FAK GI ILL+SN+
Sbjct: 570 FYVAFGLLICNTDVCH*FAKYKGIHNWILLDSNQ 671
Score = 42.3 bits (86), Expect(6) = 1e-064
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3 / -2
Query: 960 FDSSSISLQIPFRFANPGLTSTLQISKPK 874
F+SSSI L IP FAN TS LQIS+PK
Sbjct: 667 FESSSIQLWIPLYFANQWQTSVLQISRPK 581
Score = 41.8 bits (85), Expect(3) = 2e-045
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = -2 / -1
Query: 955 LKQYQFTDSVPFCKSRANIYVTNQ*AK 875
+KQY DS FCKS ANI VTNQ*AK
Sbjct: 662 IKQYPVMDSFIFCKSVANICVTNQ*AK 582
Score = 41.4 bits (84), Expect(4) = 4e-040
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -2 / -1
Query: 145 RSYPVMPGMQ*SVMIRF 95
RSYPVMPGMQ*SVMIRF
Sbjct: 158 RSYPVMPGMQ*SVMIRF 108
Score = 40.5 bits (82), Expect(4) = 1e-057
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +3 / +1
Query: 876 LAY*FVT*MLALDLQNGTESVN*YCLSRI 962
LAY*FVT M A DLQN ES+ YCL +I
Sbjct: 583 LAY*FVTQMFATDLQNIKESITGYCLIQI 669
Score = 35.0 bits (70), Expect(4) = 1e-057
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1 / +1
Query: 667 SRCNQEQHQQSDSHSGERRNPTISSSDSINNRKRKGAGTEEILPQ 801
S+ +QEQ Q + + + S S ++RKRK EEILPQ
Sbjct: 349 SQQDQEQQHQQSDSNSNDCSNPTNKSHSDSSRKRKAEDNEEILPQ 483
Score = 35.0 bits (70), Expect(4) = 4e-040
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -1 / -3
Query: 980 CRITSIDSTQAVSVYRFRSVLQIQG*HLRY 891
C S+D QAVS Y F +LQI G HL Y
Sbjct: 687 CVAKSLDLNQAVSSYGFLYILQISGKHLCY 598
Score = 33.6 bits (67), Expect(4) = 4e-040
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1 / -3
Query: 71 HIQLVRVDRRNRAVLVMEAQELQ 3
HIQLVRV+R V+V++ QELQ
Sbjct: 102 HIQLVRVNRDRAGVVVVDPQELQ 34
Score = 33.6 bits (67), Expect(5) = 5e-035
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1 / +1
Query: 679 QEQHQQSDSHSGERRNPTISSSDSINNRKR 768
++QHQQSDS+S + NPT S + +++
Sbjct: 364 EQQHQQSDSNSNDCSNPTNKSHSDSSRKRK 453
Score = 31.3 bits (62), Expect(6) = 1e-064
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2 / -2
Query: 730 WGSCVRHCDCHFAGAV 683
WG C R C CH AGAV
Sbjct: 415 WGYCNRCCCCHSAGAV 368
Score = 30.9 bits (61), Expect(5) = 5e-035
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1 / +2
Query: 898 RC*PWICKTERNL*TDTA*VESIEVILH 981
RC P ICK RN * DTA* +S + H
Sbjct: 605 RCLPLICKI*RNP*LDTA*FKSSDFATH 688
Score = 26.3 bits (51), Expect(6) = 1e-064
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2 / -2
Query: 802 AGARFLRCLHPFSCGC 755
+GA+F RC PF+ GC
Sbjct: 484 SGAKFPRCPLPFAFGC 437
Score = 23.5 bits (45), Expect(6) = 1e-064
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2 / -2
Query: 865 KRKGFSCTSQFSVNCALIC 809
KR G +Q + NCAL+C
Sbjct: 544 KRGG*LSYNQSAANCALVC 488
>gb|BG560269.1|BG560269 RHIZ2_72_B09.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 552
Score = 147 bits (316), Expect(3) = 6e-058
Identities = 63/83 (75%), Positives = 69/83 (83%)
Frame = +1 / +1
Query: 181 PCSSAAALFRSVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQF 360
P + ++ L MA VATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQF
Sbjct: 163 PAAGSSCLPLPAMAVVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQF 342
Query: 361 LGLHDQDSTVPPVHTHQLDVAAN 429
LG+HD D++ VH HQLDVA N
Sbjct: 343 LGIHDDDASTVSVHAHQLDVAVN 411
Score = 132 bits (282), Expect(3) = 4e-052
Identities = 57/78 (73%), Positives = 59/78 (75%)
Frame = -1 / -2
Query: 410 WCVWTGGTVLSWSWRPRNCSALLPESTVVTWKEEVLRSLSMSFLSGRLSSTARTWNGVSV 231
WC T + S SW P+NC ALLPESTVVTWKEEVLRSLSMSFLSGRLSSTARTWNGVSV
Sbjct: 392 WCA*TETVLASSSWIPKNCRALLPESTVVTWKEEVLRSLSMSFLSGRLSSTARTWNGVSV 213
Query: 230 ATAAMTDRNKAAAELQGR 177
AT AM R K GR
Sbjct: 212 ATTAMAGRGKQEEPAAGR 159
Score = 123 bits (264), Expect(3) = 6e-044
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = -3 / -1
Query: 420 HIQLVRVDRRNRAVLVMEAQELQRLAPGVDSGHLEGRGLEEPLDELPVREAVVHRQDMER 241
HIQLVRV+R V+V++ QELQ APG+DSG+LEGRGLEEPLDELPVREAVVH QDMER
Sbjct: 402 HIQLVRVNRDRAGVVVVDPQELQGFAPGIDSGYLEGRGLEEPLDELPVREAVVHGQDMER 223
Query: 240 SLCGHRRHDRSKQ 202
L GH RH +Q
Sbjct: 222 RLGGHHRHGWQRQ 184
Score = 72.5 bits (152), Expect(4) = 4e-039
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = +3 / +3
Query: 282 EAHREAPQDLFLPSDHCRLREQGAAVXXXXXXXQHGSSCPHAPAGCG 422
EAHREAPQDLFLPS+HCR REQ AV + C APAGCG
Sbjct: 264 EAHREAPQDLFLPSNHCRFREQSPAVLGDPRRRRQHGLCSRAPAGCG 404
Score = 70.3 bits (147), Expect(3) = 6e-058
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = +1 / +1
Query: 433 DVAVNLIITDYCMPGMTGYDLLKKIKESSS 522
DVAVNLIITDYCMPGMTGYDLLKKIK+ SS
Sbjct: 397 DVAVNLIITDYCMPGMTGYDLLKKIKQESS 486
Score = 60.2 bits (125), Expect(4) = 4e-039
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +1 / +1
Query: 493 LLKKIKESSSLRDIPVVIMSSENIPSRINRC 585
L K +ESSSLRDIPVVIMSSENIPSRINRC
Sbjct: 460 LKKIKQESSSLRDIPVVIMSSENIPSRINRC 552
Score = 59.3 bits (123), Expect(3) = 4e-052
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = -1 / -2
Query: 584 HLLILEGMFSEDMITTGISLRDDDSLI 504
HLLILEGMFS+DMITTGISLRDDDS +
Sbjct: 551 HLLILEGMFSDDMITTGISLRDDDSCL 471
Score = 55.1 bits (114), Expect(4) = 4e-039
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +3 / +3
Query: 429 SGCGCEPDHHRLLHAWHDRI*PAQEDQGVVV 521
+GCG EPDHH LLHA HDR+* A+EDQ ++
Sbjct: 393 AGCGGEPDHHGLLHARHDRV*SAKEDQAGII 485
Score = 54.7 bits (113), Expect(3) = 4e-052
Identities = 23/26 (88%), Positives = 23/26 (88%)
Frame = -1 / -2
Query: 521 DDDSLIFLSRSYPVMPGMQ*SVMIRF 444
DD LIF SRSYPVMPGMQ*SVMIRF
Sbjct: 485 DDSCLIFFSRSYPVMPGMQ*SVMIRF 408
Score = 51.0 bits (105), Expect(3) = 6e-044
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -3 / -1
Query: 513 LLDLLEQVISCHARHAVVCDDQVHSHI 433
LLDLL Q+I CHA HAVV DDQVH HI
Sbjct: 477 LLDLL*QIIPCHAGHAVVRDDQVHRHI 397
Score = 47.8 bits (98), Expect(3) = 6e-058
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +3 / +3
Query: 498 QEDQGVVVSQRYPGGDHVL*EHSFKDQ*V 584
++ G++VS RYPG DHV+*EH FKDQ*+
Sbjct: 465 EDQAGIIVS*RYPGRDHVV*EHPFKDQ*M 551
Score = 43.7 bits (89), Expect(3) = 6e-044
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -3 / -1
Query: 585 APIDP*RNVLRGHDHHRDISERR 517
A IDP*R+VLR HDH RDIS+RR
Sbjct: 552 ASIDP*RDVLRRHDHDRDISKRR 484
Score = 31.8 bits (63), Expect(4) = 4e-039
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3 / +3
Query: 201 LVSIGHGGGGHRDSV 245
L S HGGGGHRD+V
Sbjct: 183 LASASHGGGGHRDAV 227
>gb|CW476411.1|CW476411 fsbb001f233e09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f233e09, DNA
sequence
Length = 790
Score = 89.0 bits (188), Expect(7) = 4e-045
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = +1 / +2
Query: 580 RCLEEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQ 696
RCLEEGADEFFLKPVRLSDMNKLKPHILKSRC + HQ+
Sbjct: 149 RCLEEGADEFFLKPVRLSDMNKLKPHILKSRCREHNHQE 265
Score = 73.0 bits (153), Expect(7) = 1e-053
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = -1 / -2
Query: 665 FSMWGLSLFMSDSRTGFRKNSSAPSSRHLL 576
FSMWGLSLFMSDSRTGFRKNSSAPSSRHL+
Sbjct: 234 FSMWGLSLFMSDSRTGFRKNSSAPSSRHLI 145
Score = 72.1 bits (151), Expect(4) = 4e-028
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = -2 / -3
Query: 676 CICFSVCGA*ACSCLIAAQVLGRTRQLLPPGT 581
CICFSVCGA*ACSCLIA VLG+T QLLPPGT
Sbjct: 245 CICFSVCGA*ACSCLIAVLVLGKTHQLLPPGT 150
Score = 68.4 bits (143), Expect(3) = 2e-026
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = +3 / +1
Query: 582 VPGGRS*RVLPKTCAAIRHEQAQAPHTEKQMQPGTAP 692
VPGGRS* V PKT AIRHEQAQAPHTEKQMQ +P
Sbjct: 151 VPGGRS**VFPKTSTAIRHEQAQAPHTEKQMQRAQSP 261
Score = 57.4 bits (119), Expect(7) = 1e-053
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -3
Query: 799 GARFLRCLHPFSCGCLCYRCC 737
GARFLRCL PFSCGC CYRCC
Sbjct: 386 GARFLRCLLPFSCGCCCYRCC 324
Score = 53.3 bits (110), Expect(7) = 4e-045
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +2 / +3
Query: 875 FGLLICNVDVSPGFAKRNGICKLILLESNR 964
FGLLI N+D+S FAK NGICK ILLESN+
Sbjct: 486 FGLLIYNIDISTRFAKYNGICKRILLESNQ 575
Score = 52.8 bits (109), Expect(7) = 1e-053
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -2 / -3
Query: 955 LKQYQFTDSVPFCKSRANIYVTNQ*AK 875
LKQY FTDS+ FCKS ANIYV NQ*AK
Sbjct: 566 LKQYPFTDSIIFCKSSANIYVINQ*AK 486
Score = 50.1 bits (103), Expect(7) = 1e-053
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -2 / -3
Query: 763 CGCLCYRCC*LWGSCVRHCDCHFAGAVPGCICFSVC 656
C C CC W C+ C CHFAGAVPG +C
Sbjct: 344 CCCYRCCCCCSWDYCIPRCCCHFAGAVPGDCALCIC 237
Score = 47.8 bits (98), Expect(3) = 2e-026
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +3 / +1
Query: 876 LAY*FVT*MLALDLQNGTESVN*YCLSRI 962
LAY*F+T*+LALDLQN ESV YCLS+I
Sbjct: 487 LAY*FIT*ILALDLQNIMESVKGYCLSQI 573
Score = 44.1 bits (90), Expect(7) = 4e-045
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 735 QQQR*HKQPQEKGCRHRRNLAP 800
QQQR* +QPQEKG R RRNLAP
Sbjct: 322 QQQR*QQQPQEKGSRQRRNLAP 387
Score = 43.2 bits (88), Expect(3) = 2e-026
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = +1 / +2
Query: 679 QEQHQQSDSHSGERRNPTISSSDSINNRKRKGAGTEEILPQ 801
Q Q S+S + SSS S +NRKRKGA EEILPQ
Sbjct: 266 QLQQSDSNSEECSNPTSSSSSSGSSSNRKRKGADNEEILPQ 388
Score = 40.5 bits (82), Expect(4) = 4e-028
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = -3 / -1
Query: 960 FDSSSISLQIPFRFANPGLTSTLQISKPK 874
FDSSSI LQIP FAN L S L IS+PK
Sbjct: 571 FDSSSILLQIPLYFANLVLISML*ISRPK 485
Score = 36.3 bits (73), Expect(4) = 4e-028
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -3 / -1
Query: 801 LGQDFFGACTLSLAVVYAIAAA 736
LGQDFF C+LSLAV A AAA
Sbjct: 388 LGQDFFVVCSLSLAVAAATAAA 323
Score = 34.5 bits (69), Expect(7) = 1e-053
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -1
Query: 861 EKVLAVLVSSQLTVP*SVC 805
EK LAVLVS QLT+P*SVC
Sbjct: 445 EKRLAVLVSLQLTMP*SVC 389
Score = 33.1 bits (66), Expect(4) = 4e-028
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / -3
Query: 871 K*KRKGFSCTSQFSVNCALICLP 803
K RK S TSQF+ N ALICLP
Sbjct: 455 KENRKKVSGTSQFAANYALICLP 387
Score = 30.4 bits (60), Expect(7) = 4e-045
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +2 / +3
Query: 806 QTDQGTVN*ELTSTAKTFSFSL 871
QTDQG V+ +LTSTA FS L
Sbjct: 390 QTDQGIVSCKLTSTANLFSVFL 455
Score = 28.1 bits (55), Expect(7) = 1e-053
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -2
Query: 1054 LCPTGCYCDSVSWLSILI 1001
L P CYCDSV LS L+
Sbjct: 666 LSPMVCYCDSVKLLSQLV 613
Score = 27.6 bits (54), Expect(7) = 4e-045
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1 / +3
Query: 955 VESIEVILHQISLFHL 1002
+ES +VIL QISLFH+
Sbjct: 561 LESNQVILQQISLFHI 608
Score = 25.4 bits (49), Expect(7) = 1e-053
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / -1
Query: 998 *NREIWCRITSIDST 954
*NREI CRIT DS+
Sbjct: 604 *NREICCRIT*FDSS 560
Score = 24.4 bits (47), Expect(7) = 4e-045
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +3
Query: 1137 LAWIQVVTTVVS 1172
L WIQV+TT VS
Sbjct: 750 LGWIQVLTTAVS 785
Score = 22.6 bits (43), Expect(7) = 4e-045
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3 / +2
Query: 1011 ESQLTESQ*QPVGHS 1055
++ LTESQ*Q +G S
Sbjct: 623 DNNLTESQ*QTIGDS 667
>gb|CW137415.1|CW137415 104_523_11119279_116_34870_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11119279, DNA
sequence
Length = 616
Score = 80.8 bits (170), Expect(6) = 1e-040
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +1 / -2
Query: 589 EEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQ 696
EEGADEFFLKPVRLSDMNKLKPHILKSRC + HQ+
Sbjct: 615 EEGADEFFLKPVRLSDMNKLKPHILKSRCREHNHQE 508
Score = 64.3 bits (134), Expect(7) = 3e-051
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -1 / +2
Query: 665 FSMWGLSLFMSDSRTGFRKNSSAPSS 588
FSMWGLSLFMSDSRTGFRKNSSAPSS
Sbjct: 539 FSMWGLSLFMSDSRTGFRKNSSAPSS 616
Score = 63.8 bits (133), Expect(4) = 1e-025
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = -2 / +3
Query: 676 CICFSVCGA*ACSCLIAAQVLGRTRQLLP 590
CICFSVCGA*ACSCLIA VLG+T QLLP
Sbjct: 528 CICFSVCGA*ACSCLIAVLVLGKTHQLLP 614
Score = 63.4 bits (132), Expect(3) = 5e-025
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +3 / -1
Query: 588 GGRS*RVLPKTCAAIRHEQAQAPHTEKQMQPGTAP 692
GGRS* V PKT AIRHEQAQAPHTEKQMQ +P
Sbjct: 616 GGRS**VFPKTSTAIRHEQAQAPHTEKQMQRAQSP 512
Score = 57.4 bits (119), Expect(7) = 3e-051
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / +3
Query: 799 GARFLRCLHPFSCGCLCYRCC 737
GARFLRCL PFSCGC CYRCC
Sbjct: 387 GARFLRCLLPFSCGCCCYRCC 449
Score = 53.3 bits (110), Expect(6) = 1e-040
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +2 / -3
Query: 875 FGLLICNVDVSPGFAKRNGICKLILLESNR 964
FGLLI N+D+S FAK NGICK ILLESN+
Sbjct: 287 FGLLIYNIDISTRFAKYNGICKRILLESNQ 198
Score = 52.8 bits (109), Expect(7) = 3e-051
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -2 / +3
Query: 955 LKQYQFTDSVPFCKSRANIYVTNQ*AK 875
LKQY FTDS+ FCKS ANIYV NQ*AK
Sbjct: 207 LKQYPFTDSIIFCKSSANIYVINQ*AK 287
Score = 50.1 bits (103), Expect(7) = 3e-051
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -2 / +3
Query: 763 CGCLCYRCC*LWGSCVRHCDCHFAGAVPGCICFSVC 656
C C CC W C+ C CHFAGAVPG +C
Sbjct: 429 CCCYRCCCCCSWDYCIPRCCCHFAGAVPGDCALCIC 536
Score = 47.8 bits (98), Expect(3) = 5e-025
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +3 / -1
Query: 876 LAY*FVT*MLALDLQNGTESVN*YCLSRI 962
LAY*F+T*+LALDLQN ESV YCLS+I
Sbjct: 286 LAY*FIT*ILALDLQNIMESVKGYCLSQI 200
Score = 44.1 bits (90), Expect(6) = 1e-040
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3 / -1
Query: 735 QQQR*HKQPQEKGCRHRRNLAP 800
QQQR* +QPQEKG R RRNLAP
Sbjct: 451 QQQR*QQQPQEKGSRQRRNLAP 386
Score = 43.2 bits (88), Expect(3) = 5e-025
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = +1 / -2
Query: 679 QEQHQQSDSHSGERRNPTISSSDSINNRKRKGAGTEEILPQ 801
Q Q S+S + SSS S +NRKRKGA EEILPQ
Sbjct: 507 QLQQSDSNSEECSNPTSSSSSSGSSSNRKRKGADNEEILPQ 385
Score = 40.5 bits (82), Expect(4) = 1e-025
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = -3 / +1
Query: 960 FDSSSISLQIPFRFANPGLTSTLQISKPK 874
FDSSSI LQIP FAN L S L IS+PK
Sbjct: 202 FDSSSILLQIPLYFANLVLISML*ISRPK 288
Score = 36.3 bits (73), Expect(4) = 1e-025
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -3 / +1
Query: 801 LGQDFFGACTLSLAVVYAIAAA 736
LGQDFF C+LSLAV A AAA
Sbjct: 385 LGQDFFVVCSLSLAVAAATAAA 450
Score = 34.5 bits (69), Expect(7) = 3e-051
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / +1
Query: 861 EKVLAVLVSSQLTVP*SVC 805
EK LAVLVS QLT+P*SVC
Sbjct: 328 EKRLAVLVSLQLTMP*SVC 384
Score = 33.1 bits (66), Expect(4) = 1e-025
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / +3
Query: 871 K*KRKGFSCTSQFSVNCALICLP 803
K RK S TSQF+ N ALICLP
Sbjct: 318 KENRKKVSGTSQFAANYALICLP 386
Score = 30.4 bits (60), Expect(6) = 1e-040
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +2 / -3
Query: 806 QTDQGTVN*ELTSTAKTFSFSL 871
QTDQG V+ +LTSTA FS L
Sbjct: 383 QTDQGIVSCKLTSTANLFSVFL 318
Score = 28.1 bits (55), Expect(7) = 3e-051
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / +2
Query: 1054 LCPTGCYCDSVSWLSILI 1001
L P CYCDSV LS L+
Sbjct: 107 LSPMVCYCDSVKLLSQLV 160
Score = 27.6 bits (54), Expect(6) = 1e-040
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1 / -3
Query: 955 VESIEVILHQISLFHL 1002
+ES +VIL QISLFH+
Sbjct: 212 LESNQVILQQISLFHI 165
Score = 25.4 bits (49), Expect(7) = 3e-051
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / +1
Query: 998 *NREIWCRITSIDST 954
*NREI CRIT DS+
Sbjct: 169 *NREICCRIT*FDSS 213
Score = 22.6 bits (43), Expect(6) = 1e-040
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3 / -2
Query: 1011 ESQLTESQ*QPVGHS 1055
++ LTESQ*Q +G S
Sbjct: 150 DNNLTESQ*QTIGDS 106
>gb|CW131219.1|CW131219 104_514_11115553_148_34788_013 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11115553, DNA
sequence
Length = 669
Score = 89.0 bits (188), Expect(4) = 6e-033
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = +1 / -3
Query: 580 RCLEEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQ 696
RCLEEGADEFFLKPVRLSDMNKLKPHILKSRC + HQ+
Sbjct: 397 RCLEEGADEFFLKPVRLSDMNKLKPHILKSRCREHNHQE 281
Score = 73.0 bits (153), Expect(5) = 6e-044
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = -1 / +3
Query: 665 FSMWGLSLFMSDSRTGFRKNSSAPSSRHLL 576
FSMWGLSLFMSDSRTGFRKNSSAPSSRHL+
Sbjct: 312 FSMWGLSLFMSDSRTGFRKNSSAPSSRHLI 401
Score = 72.1 bits (151), Expect(4) = 2e-023
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = -2 / +1
Query: 676 CICFSVCGA*ACSCLIAAQVLGRTRQLLPPGT 581
CICFSVCGA*ACSCLIA VLG+T QLLPPGT
Sbjct: 301 CICFSVCGA*ACSCLIAVLVLGKTHQLLPPGT 396
Score = 68.4 bits (143), Expect(3) = 4e-022
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = +3 / -2
Query: 582 VPGGRS*RVLPKTCAAIRHEQAQAPHTEKQMQPGTAP 692
VPGGRS* V PKT AIRHEQAQAPHTEKQMQ +P
Sbjct: 395 VPGGRS**VFPKTSTAIRHEQAQAPHTEKQMQRAQSP 285
Score = 57.4 bits (119), Expect(5) = 6e-044
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / +1
Query: 799 GARFLRCLHPFSCGCLCYRCC 737
GARFLRCL PFSCGC CYRCC
Sbjct: 160 GARFLRCLLPFSCGCCCYRCC 222
Score = 50.1 bits (103), Expect(5) = 6e-044
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -2 / +1
Query: 763 CGCLCYRCC*LWGSCVRHCDCHFAGAVPGCICFSVC 656
C C CC W C+ C CHFAGAVPG +C
Sbjct: 202 CCCYRCCCCCSWDYCIPRCCCHFAGAVPGDCALCIC 309
Score = 44.1 bits (90), Expect(4) = 6e-033
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3 / -2
Query: 735 QQQR*HKQPQEKGCRHRRNLAP 800
QQQR* +QPQEKG R RRNLAP
Sbjct: 224 QQQR*QQQPQEKGSRQRRNLAP 159
Score = 43.2 bits (88), Expect(3) = 4e-022
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = +1 / -3
Query: 679 QEQHQQSDSHSGERRNPTISSSDSINNRKRKGAGTEEILPQ 801
Q Q S+S + SSS S +NRKRKGA EEILPQ
Sbjct: 280 QLQQSDSNSEECSNPTSSSSSSGSSSNRKRKGADNEEILPQ 158
Score = 38.6 bits (78), Expect(5) = 6e-044
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -2 / +1
Query: 934 DSVPFCKSRANIYVTNQ*AK 875
DS+ FCKS ANIYV NQ*AK
Sbjct: 1 DSIIFCKSSANIYVINQ*AK 60
Score = 36.3 bits (73), Expect(4) = 2e-023
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -3 / +2
Query: 801 LGQDFFGACTLSLAVVYAIAAA 736
LGQDFF C+LSLAV A AAA
Sbjct: 158 LGQDFFVVCSLSLAVAAATAAA 223
Score = 35.0 bits (70), Expect(4) = 6e-033
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +2 / -1
Query: 875 FGLLICNVDVSPGFAKRNGI 934
FGLLI N+D+S FAK NGI
Sbjct: 60 FGLLIYNIDISTRFAKYNGI 1
Score = 34.5 bits (69), Expect(5) = 6e-044
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / +2
Query: 861 EKVLAVLVSSQLTVP*SVC 805
EK LAVLVS QLT+P*SVC
Sbjct: 101 EKRLAVLVSLQLTMP*SVC 157
Score = 33.1 bits (66), Expect(4) = 2e-023
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / +1
Query: 871 K*KRKGFSCTSQFSVNCALICLP 803
K RK S TSQF+ N ALICLP
Sbjct: 91 KENRKKVSGTSQFAANYALICLP 159
Score = 32.7 bits (65), Expect(3) = 4e-022
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3 / -2
Query: 876 LAY*FVT*MLALDLQN 923
LAY*F+T*+LALDLQN
Sbjct: 59 LAY*FIT*ILALDLQN 12
Score = 30.4 bits (60), Expect(4) = 6e-033
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +2 / -1
Query: 806 QTDQGTVN*ELTSTAKTFSFSL 871
QTDQG V+ +LTSTA FS L
Sbjct: 156 QTDQGIVSCKLTSTANLFSVFL 91
Score = 24.4 bits (47), Expect(4) = 2e-023
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3 / +2
Query: 933 IPFRFANPGLTSTLQISKPK 874
IP FAN L S L IS+PK
Sbjct: 2 IPLYFANLVLISML*ISRPK 61
>gb|CX606564.1|CX606564 ANR1_3_F03.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_3_F03_A002 5', mRNA sequence
Length = 746
Score = 127 bits (272), Expect(2) = 1e-042
Identities = 49/72 (68%), Positives = 65/72 (90%)
Frame = +1 / +3
Query: 433 DVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFF 612
D +V++IITDYCMP M+GY+LLK++KES+ LR+IPVV+MSSEN P+RI RCLEEGA+EF
Sbjct: 165 DDSVHMIITDYCMPEMSGYELLKRVKESAELREIPVVLMSSENSPTRIRRCLEEGAEEFL 344
Query: 613 LKPVRLSDMNKL 648
+KPVR SD+++L
Sbjct: 345 IKPVRASDVSRL 380
Score = 85.8 bits (181), Expect(2) = 1e-023
Identities = 37/72 (51%), Positives = 48/72 (66%)
Frame = -3 / -1
Query: 648 ELVHV**PHRF*EELVSSFLQAPIDP*RNVLRGHDHHRDISERRRLLDLLEQVISCHARH 469
E HV PHR EEL+ + LQAP DP R VLR H+HH D+ + LLD L++++ H RH
Sbjct: 380 EARHVGGPHRLDEELLGTLLQAPPDPRRRVLRRHEHHGDLPQLS*LLDPLQELVPAHLRH 201
Query: 468 AVVCDDQVHSHI 433
AV+ DD VH+ I
Sbjct: 200 AVIRDDHVHAVI 165
Score = 68.4 bits (143), Expect(2) = 1e-042
Identities = 29/48 (60%), Positives = 37/48 (77%)
Frame = +1 / +3
Query: 232 TETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHD 375
T P HVLAVDDS+ DR +I RLL++S ++VTTVDSG +AL+ L L D
Sbjct: 27 TPEPPHVLAVDDSIVDRAVISRLLRSSKYRVTTVDSGKRALEVLSLDD 170
Score = 46.4 bits (95), Expect(2) = 1e-023
Identities = 27/52 (51%), Positives = 30/52 (57%)
Frame = -1 / -2
Query: 374 SWRPRNCSALLPESTVVTWKEEVLRSLSMSFLSGRLSSTARTWNGVSVATAA 219
S R R ALLP STVVT E+ RSL M+ S LSSTART G V +
Sbjct: 169 SSRLRTSKALLPLSTVVTRYLELRRSLEMTARSTMLSSTARTCGGSGVTVVS 14
>gb|CN146978.1|CN146978 WOUND1_46_C04.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_46_C04_A002 3', mRNA sequence
Length = 759
Score = 130 bits (278), Expect(2) = 2e-039
Identities = 52/69 (75%), Positives = 63/69 (91%)
Frame = +1 / +2
Query: 442 VNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKP 621
VN+IITDY MPGMTGY+LLK +KESS LR+IPVVIMSSEN+P+RI RCLEEGA++F LKP
Sbjct: 239 VNMIITDYWMPGMTGYELLKHVKESSELREIPVVIMSSENVPTRITRCLEEGAEDFLLKP 418
Query: 622 VRLSDMNKL 648
VR SD+++L
Sbjct: 419 VRPSDVSRL 445
Score = 55.1 bits (114), Expect(2) = 2e-039
Identities = 22/41 (53%), Positives = 33/41 (80%)
Frame = +1 / +2
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGL 369
HVLAVDDS DR +I ++L++S ++VTTV+S ++AL+ L L
Sbjct: 101 HVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLAL 223
>gb|CN147029.1|CN147029 WOUND1_46_C04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_46_C04_A002 5', mRNA sequence
Length = 771
Score = 130 bits (278), Expect(2) = 2e-039
Identities = 52/69 (75%), Positives = 63/69 (91%)
Frame = +1 / +1
Query: 442 VNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKP 621
VN+IITDY MPGMTGY+LLK +KESS LR+IPVVIMSSEN+P+RI RCLEEGA++F LKP
Sbjct: 436 VNMIITDYWMPGMTGYELLKHVKESSELREIPVVIMSSENVPTRITRCLEEGAEDFLLKP 615
Query: 622 VRLSDMNKL 648
VR SD+++L
Sbjct: 616 VRPSDVSRL 642
Score = 54.7 bits (113), Expect(2) = 2e-039
Identities = 21/41 (51%), Positives = 33/41 (80%)
Frame = +1 / +1
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGL 369
HVLAVDDS DR ++ ++L++S ++VTTV+S ++AL+ L L
Sbjct: 298 HVLAVDDSSVDRAVVAKILRSSKYRVTTVESATRALELLAL 420
>gb|CW177734.1|CW177734 104_591_11159186_148_36609_011 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11159186, DNA
sequence
Length = 602
Score = 91.3 bits (193), Expect(3) = 8e-027
Identities = 40/66 (60%), Positives = 46/66 (69%)
Frame = -3 / +3
Query: 360 ELQRLAPGVDSGHLEGRGLEEPLDELPVREAVVHRQDMERSLCGHRRHDRSKQGSSRAAG 181
+LQ+ D LEGRGLEEPLDELPVRE VVHRQDMERSLCGHRR R + G S+
Sbjct: 405 KLQKR*ESSDLITLEGRGLEEPLDELPVRETVVHRQDMERSLCGHRRRRRRRHGRSKQES 584
Query: 180 KNWGCR 163
+ G +
Sbjct: 585 RAAGSK 602
Score = 81.3 bits (171), Expect(4) = 2e-038
Identities = 38/54 (70%), Positives = 41/54 (75%)
Frame = +1 / -1
Query: 196 AALFRSVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQ 357
+A+ + AAV TETPFHVLAVDDSLPDRKLIERLLKTSSFQ V S LQ
Sbjct: 569 SAMAAAAAAAVTTETPFHVLAVDDSLPDRKLIERLLKTSSFQGN*VTGFSSLLQ 408
Score = 78.5 bits (165), Expect(4) = 1e-038
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = -1 / +1
Query: 332 TVVTWKEEVLRSLSMSFLSGRLSSTARTWNGVSVATAA 219
T + WKEEVLRSLSMSFLSGRLSSTARTWNGVSV TAA
Sbjct: 433 T*LPWKEEVLRSLSMSFLSGRLSSTARTWNGVSVVTAA 546
Score = 75.3 bits (158), Expect(4) = 2e-038
Identities = 29/32 (90%), Positives = 29/32 (90%)
Frame = +3 / -2
Query: 417 CGCQSGCGCEPDHHRLLHAWHDRI*PAQEDQG 512
CG QSGCG EPDHHRLLHA HDRI*PAQEDQG
Sbjct: 136 CG*QSGCGSEPDHHRLLHARHDRI*PAQEDQG 41
Score = 72.5 bits (152), Expect(4) = 7e-032
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +1 / -3
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSL 525
NQDVAVNLIITDYCMPGMTGYDLLKKIK ++ L
Sbjct: 126 NQDVAVNLIITDYCMPGMTGYDLLKKIKVTTGL 28
Score = 68.4 bits (143), Expect(4) = 1e-038
Identities = 28/32 (87%), Positives = 28/32 (87%)
Frame = -3 / +1
Query: 510 LDLLEQVISCHARHAVVCDDQVHSHILIGSHI 415
LDLLEQVISCHA HAVVCDDQVH HILI HI
Sbjct: 43 LDLLEQVISCHAGHAVVCDDQVHCHILIVIHI 138
Score = 51.9 bits (107), Expect(3) = 8e-027
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -1 / +2
Query: 512 SLIFLSRSYPVMPGMQ*SVMIRF 444
+LIFLSRSYPVMPGMQ*SVMIRF
Sbjct: 41 TLIFLSRSYPVMPGMQ*SVMIRF 109
Score = 50.1 bits (103), Expect(4) = 7e-032
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1 / -2
Query: 322 VTTVDSGSKALQFLGLHDQDSTVP 393
VTTVDSGSKALQFLGLHD S VP
Sbjct: 334 VTTVDSGSKALQFLGLHDDHSPVP 263
Score = 50.1 bits (103), Expect(4) = 1e-038
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = -3 / +2
Query: 393 RNRAVLVMEAQELQRLAPGVDSGH 322
RNRAV+VME+QELQRLAP VDSGH
Sbjct: 263 RNRAVVVMESQELQRLAP*VDSGH 334
Score = 50.1 bits (103), Expect(4) = 7e-032
Identities = 22/36 (61%), Positives = 22/36 (61%)
Frame = +3 / -3
Query: 213 GHGGGGHRDSVXXXXXXXXXXXXEAHREAPQDLFLP 320
G GGG HRDSV EAHREAPQDLFLP
Sbjct: 552 GGGGGDHRDSVPCPGGGRQSPGQEAHREAPQDLFLP 445
Score = 37.7 bits (76), Expect(4) = 2e-038
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +2 / -3
Query: 341 GARRCSSWASMTRTARFL 394
GARRCSSW SMT TA FL
Sbjct: 315 GARRCSSWDSMTTTALFL 262
Score = 27.6 bits (54), Expect(4) = 7e-032
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / -3
Query: 201 LVSIGHGGGG 230
LVSIGHGGGG
Sbjct: 579 LVSIGHGGGG 550
Score = 26.7 bits (52), Expect(4) = 1e-038
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / +2
Query: 229 PPPP*PIETRQ 197
PPPP PIETR+
Sbjct: 551 PPPPWPIETRE 583
Score = 23.1 bits (44), Expect(4) = 2e-038
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3 / -1
Query: 393 SCPHAPAG 416
SCPH PAG
Sbjct: 266 SCPHRPAG 243
Score = 21.7 bits (41), Expect(3) = 8e-027
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -2 / +3
Query: 439 PHPDWQPH 416
PHPD PH
Sbjct: 114 PHPDCHPH 137
>gb|CW243252.1|CW243252 104_703_11219878_148_37569_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11219878, DNA
sequence
Length = 663
Score = 91.3 bits (193), Expect(3) = 1e-023
Identities = 40/66 (60%), Positives = 46/66 (69%)
Frame = -3 / +2
Query: 360 ELQRLAPGVDSGHLEGRGLEEPLDELPVREAVVHRQDMERSLCGHRRHDRSKQGSSRAAG 181
+LQ+ D LEGRGLEEPLDELPVRE VVHRQDMERSLCGHRR R + G S+
Sbjct: 347 KLQKR*ESSDLITLEGRGLEEPLDELPVRETVVHRQDMERSLCGHRRRRRRRHGRSKQES 526
Query: 180 KNWGCR 163
+ G +
Sbjct: 527 RAAGSK 544
Score = 83.1 bits (175), Expect(4) = 9e-035
Identities = 39/54 (72%), Positives = 42/54 (77%)
Frame = +1 / -3
Query: 196 AALFRSVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQ 357
+A+ + AAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQ V S LQ
Sbjct: 511 SAMAAAAAAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQGN*VTGFSSLLQ 350
Score = 80.3 bits (169), Expect(4) = 5e-036
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = -1 / +3
Query: 332 TVVTWKEEVLRSLSMSFLSGRLSSTARTWNGVSVATAA 219
T + WKEEVLRSLSMSFLSGRLSSTARTWNGVSVATAA
Sbjct: 375 T*LPWKEEVLRSLSMSFLSGRLSSTARTWNGVSVATAA 488
Score = 61.1 bits (127), Expect(4) = 9e-035
Identities = 23/26 (88%), Positives = 23/26 (88%)
Frame = +3 / -1
Query: 417 CGCQSGCGCEPDHHRLLHAWHDRI*P 494
CG QSGCG EPDHHRLLHA HDRI*P
Sbjct: 78 CG*QSGCGSEPDHHRLLHARHDRI*P 1
Score = 58.3 bits (121), Expect(4) = 1e-028
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +1 / -2
Query: 427 NQDVAVNLIITDYCMPGMTGYD 492
NQDVAVNLIITDYCMPGMTGYD
Sbjct: 68 NQDVAVNLIITDYCMPGMTGYD 3
Score = 55.6 bits (115), Expect(4) = 5e-036
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -3 / +3
Query: 492 VISCHARHAVVCDDQVHSHILIGSHI 415
VISCHA HAVVCDDQVH HILI HI
Sbjct: 3 VISCHAGHAVVCDDQVHCHILIVIHI 80
Score = 53.3 bits (110), Expect(4) = 1e-028
Identities = 23/36 (63%), Positives = 23/36 (63%)
Frame = +3 / -2
Query: 213 GHGGGGHRDSVXXXXXXXXXXXXEAHREAPQDLFLP 320
G GGGGHRDSV EAHREAPQDLFLP
Sbjct: 494 GGGGGGHRDSVPCPGGGRQSPGQEAHREAPQDLFLP 387
Score = 50.1 bits (103), Expect(4) = 1e-028
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1 / -1
Query: 322 VTTVDSGSKALQFLGLHDQDSTVP 393
VTTVDSGSKALQFLGLHD S VP
Sbjct: 276 VTTVDSGSKALQFLGLHDDHSPVP 205
Score = 50.1 bits (103), Expect(4) = 5e-036
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = -3 / +1
Query: 393 RNRAVLVMEAQELQRLAPGVDSGH 322
RNRAV+VME+QELQRLAP VDSGH
Sbjct: 205 RNRAVVVMESQELQRLAP*VDSGH 276
Score = 41.4 bits (84), Expect(3) = 1e-023
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -1 / +1
Query: 494 RSYPVMPGMQ*SVMIRF 444
RSYPVMPGMQ*SVMIRF
Sbjct: 1 RSYPVMPGMQ*SVMIRF 51
Score = 37.7 bits (76), Expect(4) = 9e-035
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +2 / -2
Query: 341 GARRCSSWASMTRTARFL 394
GARRCSSW SMT TA FL
Sbjct: 257 GARRCSSWDSMTTTALFL 204
Score = 29.0 bits (57), Expect(4) = 5e-036
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2 / +1
Query: 229 PPPP*PIETRQQQSCREEL 173
PPPP PIETR+ ++EL
Sbjct: 493 PPPPWPIETRE*SCRKQEL 549
Score = 28.1 bits (55), Expect(4) = 1e-028
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3 / -2
Query: 174 NSSLQLCCCLVSIGHGGGG 230
NS LVSIGHGGGG
Sbjct: 548 NSCFLQLYSLVSIGHGGGG 492
Score = 23.1 bits (44), Expect(4) = 9e-035
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3 / -3
Query: 393 SCPHAPAG 416
SCPH PAG
Sbjct: 208 SCPHRPAG 185
Score = 21.7 bits (41), Expect(3) = 1e-023
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -2 / +2
Query: 439 PHPDWQPH 416
PHPD PH
Sbjct: 56 PHPDCHPH 79
>gb|CW478392.1|CW478392 fsbb001f236e04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f236e04, DNA
sequence
Length = 614
Score = 89.0 bits (188), Expect(2) = 5e-024
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = +1 / -1
Query: 580 RCLEEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQ 696
RCLEEGADEFFLKPVRLSDMNKLKPHILKSRC + HQ+
Sbjct: 278 RCLEEGADEFFLKPVRLSDMNKLKPHILKSRCREHNHQE 162
Score = 73.0 bits (153), Expect(4) = 2e-035
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = -1 / +1
Query: 665 FSMWGLSLFMSDSRTGFRKNSSAPSSRHLL 576
FSMWGLSLFMSDSRTGFRKNSSAPSSRHL+
Sbjct: 193 FSMWGLSLFMSDSRTGFRKNSSAPSSRHLI 282
Score = 57.4 bits (119), Expect(4) = 2e-035
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / +2
Query: 799 GARFLRCLHPFSCGCLCYRCC 737
GARFLRCL PFSCGC CYRCC
Sbjct: 41 GARFLRCLLPFSCGCCCYRCC 103
Score = 50.1 bits (103), Expect(4) = 2e-035
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -2 / +2
Query: 763 CGCLCYRCC*LWGSCVRHCDCHFAGAVPGCICFSVC 656
C C CC W C+ C CHFAGAVPG +C
Sbjct: 83 CCCYRCCCCCSWDYCIPRCCCHFAGAVPGDCALCIC 190
Score = 44.1 bits (90), Expect(2) = 5e-024
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3 / -3
Query: 735 QQQR*HKQPQEKGCRHRRNLAP 800
QQQR* +QPQEKG R RRNLAP
Sbjct: 105 QQQR*QQQPQEKGSRQRRNLAP 40
Score = 26.7 bits (52), Expect(4) = 2e-035
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2 / +2
Query: 841 SQFSVNCALICLP 803
SQF+ N ALICLP
Sbjct: 2 SQFAANYALICLP 40
>gb|CW115976.1|CW115976 104_491_11106855_148_34596_058 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11106855, DNA
sequence
Length = 571
Score = 75.3 bits (158), Expect(5) = 2e-034
Identities = 29/32 (90%), Positives = 29/32 (90%)
Frame = +3 / +3
Query: 417 CGCQSGCGCEPDHHRLLHAWHDRI*PAQEDQG 512
CG QSGCG EPDHHRLLHA HDRI*PAQEDQG
Sbjct: 240 CG*QSGCGSEPDHHRLLHARHDRI*PAQEDQG 335
Score = 72.5 bits (152), Expect(3) = 5e-030
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +1 / +1
Query: 427 NQDVAVNLIITDYCMPGMTGYDLLKKIKESSSL 525
NQDVAVNLIITDYCMPGMTGYDLLKKIK ++ L
Sbjct: 250 NQDVAVNLIITDYCMPGMTGYDLLKKIKVTTGL 348
Score = 68.4 bits (143), Expect(3) = 2e-030
Identities = 28/32 (87%), Positives = 28/32 (87%)
Frame = -3 / -2
Query: 510 LDLLEQVISCHARHAVVCDDQVHSHILIGSHI 415
LDLLEQVISCHA HAVVCDDQVH HILI HI
Sbjct: 333 LDLLEQVISCHAGHAVVCDDQVHCHILIVIHI 238
Score = 58.3 bits (121), Expect(3) = 2e-030
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -1 / -3
Query: 584 HLLILEGMFSEDMITTGISLRDDDS 510
HLLIL+GMFSEDMITTGISLRDDDS
Sbjct: 548 HLLILKGMFSEDMITTGISLRDDDS 474
Score = 57.9 bits (120), Expect(4) = 1e-025
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = -3 / -2
Query: 585 APIDP*RNVLRGHDHHRDISERRRLL 508
+PIDP RNVLRGHDHH DISERRRLL
Sbjct: 549 SPIDPERNVLRGHDHHWDISERRRLL 472
Score = 55.6 bits (115), Expect(5) = 2e-034
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / +3
Query: 510 GVVVSQRYPGGDHVL*EHSFKDQ*V 584
GVVVSQRYP GDHVL*EHSF+DQ*V
Sbjct: 474 GVVVSQRYPSGDHVL*EHSFQDQ*V 548
Score = 52.8 bits (109), Expect(3) = 5e-030
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +1 / +1
Query: 508 KESSSLRDIPVVIMSSENIPSRINR 582
+ESSSLRDIPVVIMSSENIP RINR
Sbjct: 472 QESSSLRDIPVVIMSSENIPFRINR 546
Score = 51.9 bits (107), Expect(4) = 1e-025
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -1 / -3
Query: 512 SLIFLSRSYPVMPGMQ*SVMIRF 444
+LIFLSRSYPVMPGMQ*SVMIRF
Sbjct: 335 TLIFLSRSYPVMPGMQ*SVMIRF 267
Score = 50.1 bits (103), Expect(3) = 2e-030
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = -3 / -3
Query: 393 RNRAVLVMEAQELQRLAPGVDSGH 322
RNRAV+VME+QELQRLAP VDSGH
Sbjct: 113 RNRAVVVMESQELQRLAP*VDSGH 42
Score = 50.1 bits (103), Expect(3) = 5e-030
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1 / +3
Query: 322 VTTVDSGSKALQFLGLHDQDSTVP 393
VTTVDSGSKALQFLGLHD S VP
Sbjct: 42 VTTVDSGSKALQFLGLHDDHSPVP 113
Score = 47.3 bits (97), Expect(4) = 1e-025
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -1
Query: 392 GTVLSWSWRPRNCSALLPESTVVT 321
GT L SW PRNCSALLPESTVVT
Sbjct: 112 GTGLWSSWSPRNCSALLPESTVVT 41
Score = 37.7 bits (76), Expect(5) = 2e-034
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +2 / +1
Query: 341 GARRCSSWASMTRTARFL 394
GARRCSSW SMT TA FL
Sbjct: 61 GARRCSSWDSMTTTALFL 114
Score = 34.5 bits (69), Expect(5) = 2e-034
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3 / +2
Query: 321 SDHCRLREQGAAV 359
SDHCRLREQGAAV
Sbjct: 41 SDHCRLREQGAAV 79
Score = 23.1 bits (44), Expect(5) = 2e-034
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3 / +2
Query: 393 SCPHAPAG 416
SCPH PAG
Sbjct: 110 SCPHRPAG 133
Score = 21.7 bits (41), Expect(4) = 1e-025
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -2 / -1
Query: 439 PHPDWQPH 416
PHPD PH
Sbjct: 262 PHPDCHPH 239
>gb|CF756527.1|CF756527 DSAF1_6_C12.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_6_C12_A011 5', mRNA sequence
Length = 515
Score = 127 bits (272), Expect(2) = 2e-034
Identities = 49/72 (68%), Positives = 65/72 (90%)
Frame = +1 / +2
Query: 433 DVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFF 612
D +V++IITDYCMP M+GY+LLK++KES+ LR+IPVV+MSSEN P+RI RCLEEGA+EF
Sbjct: 80 DDSVHMIITDYCMPEMSGYELLKRVKESAELREIPVVLMSSENSPTRIRRCLEEGAEEFL 259
Query: 613 LKPVRLSDMNKL 648
+KPVR SD+++L
Sbjct: 260 IKPVRASDVSRL 295
Score = 40.5 bits (82), Expect(2) = 2e-034
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1 / +2
Query: 295 RLLKTSSFQVTTVDSGSKALQFLGLHD 375
RLL++S ++VTTVDSG +AL+ L L D
Sbjct: 5 RLLRSSKYRVTTVDSGKRALEVLSLDD 85
>gb|CX606473.1|CX606473 ANR1_3_F03.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_3_F03_A002 3', mRNA sequence
Length = 667
Score = 127 bits (272), Expect(2) = 6e-034
Identities = 49/72 (68%), Positives = 65/72 (90%)
Frame = +1 / +1
Query: 433 DVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFF 612
D +V++IITDYCMP M+GY+LLK++KES+ LR+IPVV+MSSEN P+RI RCLEEGA+EF
Sbjct: 85 DDSVHMIITDYCMPEMSGYELLKRVKESAELREIPVVLMSSENSPTRIRRCLEEGAEEFL 264
Query: 613 LKPVRLSDMNKL 648
+KPVR SD+++L
Sbjct: 265 IKPVRASDVSRL 300
Score = 39.1 bits (79), Expect(2) = 6e-034
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1 / +1
Query: 286 LIERLLKTSSFQVTTVDSGSKALQFLGLHD 375
+I RLL +S ++VTTVDSG +AL+ L D
Sbjct: 1 VISRLLGSSKYRVTTVDSGKRALEVFSLDD 90
>gb|CW198874.1|CW198874 104_623_11183207_116_36840_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11183207, DNA
sequence
Length = 686
Score = 130 bits (278), Expect(2) = 2e-032
Identities = 52/69 (75%), Positives = 63/69 (91%)
Frame = +1 / -3
Query: 442 VNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKP 621
VN+IITDY MPGMTGY+LLK +KESS LR+IPVVIMSSEN+P+RI RCLEEGA++F LKP
Sbjct: 357 VNMIITDYWMPGMTGYELLKHVKESSELREIPVVIMSSENVPTRITRCLEEGAEDFLLKP 178
Query: 622 VRLSDMNKL 648
VR SD+++L
Sbjct: 177 VRPSDVSRL 151
Score = 34.5 bits (69), Expect(2) = 2e-032
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1 / -3
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQ 321
HVLAVDDS DR +I ++L++S ++
Sbjct: 621 HVLAVDDSSVDRAVIAKILRSSKYR 547
>gb|CW082645.1|CW082645 104_424_10943914_114_32383_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943914, DNA
sequence
Length = 712
Score = 130 bits (278), Expect(2) = 2e-032
Identities = 52/69 (75%), Positives = 63/69 (91%)
Frame = +1 / -3
Query: 442 VNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKP 621
VN+IITDY MPGMTGY+LLK +KESS LR+IPVVIMSSEN+P+RI RCLEEGA++F LKP
Sbjct: 398 VNMIITDYWMPGMTGYELLKHVKESSELREIPVVIMSSENVPTRITRCLEEGAEDFLLKP 219
Query: 622 VRLSDMNKL 648
VR SD+++L
Sbjct: 218 VRPSDVSRL 192
Score = 34.5 bits (69), Expect(2) = 2e-032
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1 / -3
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQ 321
HVLAVDDS DR +I ++L++S ++
Sbjct: 662 HVLAVDDSSVDRAVIAKILRSSKYR 588
>gb|CW302565.1|CW302565 104_786_11464786_116_35665_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464786, DNA
sequence
Length = 656
Score = 129 bits (277), Expect(2) = 1e-030
Identities = 50/73 (68%), Positives = 66/73 (90%)
Frame = +1 / +1
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
QD +V++IITDYCMP M+GY+LLK++KES+ LR+IPVV+MSSEN P+RI RCLEEGA+EF
Sbjct: 280 QDDSVHMIITDYCMPEMSGYELLKRVKESAELREIPVVLMSSENSPTRIRRCLEEGAEEF 459
Query: 610 FLKPVRLSDMNKL 648
+KPVR SD+++L
Sbjct: 460 LIKPVRASDVSRL 498
Score = 29.0 bits (57), Expect(2) = 1e-030
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1 / +3
Query: 292 ERLLKTSSFQVTTVDSGSKALQFLGL 369
+RL + VTTVDSG +AL+ L L
Sbjct: 45 QRLFAFVAAAVTTVDSGKRALEVLSL 122
>gb|CW282567.1|CW282567 104_758_11408780_116_35468_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11408780, DNA
sequence
Length = 491
Score = 125 bits (268), Expect(2) = 1e-029
Identities = 49/73 (67%), Positives = 65/73 (89%)
Frame = +1 / +3
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
QD +V++IITDYCMP M+GY+LLK++KES+ LR+IPVV+MSSEN P+RI RCLEEGA+EF
Sbjct: 273 QDDSVHMIITDYCMPEMSGYELLKRVKESAELREIPVVLMSSENSPTRIRRCLEEGAEEF 452
Query: 610 FLKPVRLSDMNKL 648
+KPVR S +++L
Sbjct: 453 LIKPVRASYVSRL 491
Score = 29.0 bits (57), Expect(2) = 1e-029
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1 / +2
Query: 292 ERLLKTSSFQVTTVDSGSKALQFLGL 369
+RL + VTTVDSG +AL+ L L
Sbjct: 38 QRLFAFVAAAVTTVDSGKRALEVLSL 115
>gb|CL197703.1|CL197703 104_424_10943914_114_32334_033 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943914, DNA
sequence
Length = 621
Score = 130 bits (278), Expect = 6e-029
Identities = 52/69 (75%), Positives = 63/69 (91%)
Frame = +1 / -1
Query: 442 VNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKP 621
VN+IITDY MPGMTGY+LLK +KESS LR+IPVVIMSSEN+P+RI RCLEEGA++F LKP
Sbjct: 399 VNMIITDYWMPGMTGYELLKHVKESSELREIPVVIMSSENVPTRITRCLEEGAEDFLLKP 220
Query: 622 VRLSDMNKL 648
VR SD+++L
Sbjct: 219 VRPSDVSRL 193
>gb|CW271545.1|CW271545 104_743_11403054_148_35345_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403054, DNA
sequence
Length = 641
Score = 129 bits (277), Expect = 8e-029
Identities = 50/73 (68%), Positives = 66/73 (90%)
Frame = +1 / +1
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEF 609
QD +V++IITDYCMP M+GY+LLK++KES+ LR+IPVV+MSSEN P+RI RCLEEGA+EF
Sbjct: 43 QDDSVHMIITDYCMPEMSGYELLKRVKESAELREIPVVLMSSENSPTRIRRCLEEGAEEF 222
Query: 610 FLKPVRLSDMNKL 648
+KPVR SD+++L
Sbjct: 223 LIKPVRASDVSRL 261
>gb|CF486168.1|CF486168 POL1_36_D06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_36_D06_A002 3', mRNA sequence
Length = 618
Score = 128 bits (274), Expect = 2e-028
Identities = 52/74 (70%), Positives = 64/74 (86%)
Frame = +1 / +3
Query: 442 VNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKP 621
V++IITDY MP MTGYDLLKK+KESS L+ IPVVIMSSEN+P+RI RCLEEGA++F LKP
Sbjct: 69 VSMIITDYWMPEMTGYDLLKKVKESSKLKQIPVVIMSSENVPTRITRCLEEGAEDFLLKP 248
Query: 622 VRLSDMNKLKPHIL 663
VR SD++++ IL
Sbjct: 249 VRPSDISRITTRIL 290
>gb|CF756608.1|CF756608 DSAF1_6_C12.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_6_C12_A011 3', mRNA sequence
Length = 584
Score = 127 bits (272), Expect = 4e-028
Identities = 49/72 (68%), Positives = 65/72 (90%)
Frame = +1 / +2
Query: 433 DVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFF 612
D +V++IITDYCMP M+GY+LLK++KES+ LR+IPVV+MSSEN P+RI RCLEEGA+EF
Sbjct: 2 DDSVHMIITDYCMPEMSGYELLKRVKESAELREIPVVLMSSENSPTRIRRCLEEGAEEFL 181
Query: 613 LKPVRLSDMNKL 648
+KPVR SD+++L
Sbjct: 182 IKPVRASDVSRL 217
>gb|CW476410.1|CW476410 fsbb001f233e09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f233e09, DNA
sequence
Length = 733
Score = 53.3 bits (110), Expect(6) = 1e-022
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +2 / -2
Query: 875 FGLLICNVDVSPGFAKRNGICKLILLESNR 964
FGLLI N+D+S FAK NGICK ILLESN+
Sbjct: 561 FGLLIYNIDISTRFAKYNGICKRILLESNQ 472
Score = 52.8 bits (109), Expect(5) = 1e-026
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = -2 / +2
Query: 799 GARFLRCLHPFSCGCLCYRCC 737
G FLRCL PFSCGC CYRCC
Sbjct: 662 GQEFLRCLLPFSCGCCCYRCC 724
Score = 52.8 bits (109), Expect(5) = 1e-026
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -2 / +1
Query: 955 LKQYQFTDSVPFCKSRANIYVTNQ*AK 875
LKQY FTDS+ FCKS ANIYV NQ*AK
Sbjct: 481 LKQYPFTDSIIFCKSSANIYVINQ*AK 561
Score = 37.3 bits (75), Expect(6) = 1e-022
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +3 / -2
Query: 735 QQQR*HKQPQEKGCRHRRNLAP 800
QQQR* + PQEKG R RRN P
Sbjct: 726 QQQR*QQHPQEKGSRQRRNSCP 661
Score = 34.5 bits (69), Expect(5) = 1e-026
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / +2
Query: 861 EKVLAVLVSSQLTVP*SVC 805
EK LAVLVS QLT+P*SVC
Sbjct: 602 EKRLAVLVSLQLTMP*SVC 658
Score = 30.9 bits (61), Expect(6) = 1e-022
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1 / -1
Query: 805 ANRSRHS*LRTD*Y 846
ANRSRHS*L+TD*Y
Sbjct: 658 ANRSRHS*LQTD*Y 617
Score = 28.1 bits (55), Expect(5) = 1e-026
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / +3
Query: 1054 LCPTGCYCDSVSWLSILI 1001
L P CYCDSV LS L+
Sbjct: 381 LSPMVCYCDSVKLLSQLV 434
Score = 27.6 bits (54), Expect(6) = 1e-022
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1 / -2
Query: 955 VESIEVILHQISLFHL 1002
+ES +VIL QISLFH+
Sbjct: 486 LESNQVILQQISLFHI 439
Score = 25.4 bits (49), Expect(5) = 1e-026
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / +2
Query: 998 *NREIWCRITSIDST 954
*NREI CRIT DS+
Sbjct: 443 *NREICCRIT*FDSS 487
Score = 24.4 bits (47), Expect(6) = 1e-022
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / -2
Query: 1137 LAWIQVVTTVVS 1172
L WIQV+TT VS
Sbjct: 297 LVWIQVLTTAVS 262
Score = 22.6 bits (43), Expect(6) = 1e-022
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3 / -1
Query: 1011 ESQLTESQ*QPVGHS 1055
++ LTESQ*Q +G S
Sbjct: 424 DNNLTESQ*QTIGDS 380
>gb|CW177733.1|CW177733 104_591_11159186_116_36610_011 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11159186, DNA
sequence
Length = 696
Score = 83.1 bits (175), Expect(3) = 6e-022
Identities = 39/54 (72%), Positives = 42/54 (77%)
Frame = +1 / +3
Query: 196 AALFRSVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQ 357
+A+ + AAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQ V S LQ
Sbjct: 369 SAMAAAAAAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQGN*VTGFSSLLQ 530
Score = 80.3 bits (169), Expect(3) = 2e-026
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = -1 / -3
Query: 332 TVVTWKEEVLRSLSMSFLSGRLSSTARTWNGVSVATAA 219
T + WKEEVLRSLSMSFLSGRLSSTARTWNGVSVATAA
Sbjct: 505 T*LPWKEEVLRSLSMSFLSGRLSSTARTWNGVSVATAA 392
Score = 50.1 bits (103), Expect(3) = 2e-026
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = -3 / -1
Query: 393 RNRAVLVMEAQELQRLAPGVDSGH 322
RNRAV+VME+QELQRLAP VDSGH
Sbjct: 675 RNRAVVVMESQELQRLAP*VDSGH 604
Score = 37.7 bits (76), Expect(3) = 6e-022
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +2 / +2
Query: 341 GARRCSSWASMTRTARFL 394
GARRCSSW SMT TA FL
Sbjct: 623 GARRCSSWDSMTTTALFL 676
Score = 29.0 bits (57), Expect(3) = 2e-026
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2 / -1
Query: 229 PPPP*PIETRQQQSCREEL 173
PPPP PIETR+ ++EL
Sbjct: 387 PPPPWPIETRE*SCRKQEL 331
Score = 23.1 bits (44), Expect(3) = 6e-022
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3 / +3
Query: 393 SCPHAPAG 416
SCPH PAG
Sbjct: 672 SCPHRPAG 695
>gb|CF483095.1|CF483095 POL1_11_F04.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_11_F04_A002 3', mRNA sequence
Length = 574
Score = 116 bits (247), Expect = 1e-024
Identities = 46/59 (77%), Positives = 54/59 (91%)
Frame = +1 / +3
Query: 442 VNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLK 618
VN+IITDY MPGMTGY+LLK +KESS LR+IPVVIMSSEN+P+RI RCLEEGA++F LK
Sbjct: 48 VNMIITDYWMPGMTGYELLKHVKESSELREIPVVIMSSENVPTRITRCLEEGAEDFLLK 224
>gb|BF655994.1|BF655994 FM1_42_F02.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 183
Score = 75.3 bits (158), Expect(2) = 2e-024
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = +1 / +2
Query: 310 SSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAAN 429
+SFQVTTVDSGSKALQFLG+HD D++ VH HQLDVA N
Sbjct: 8 ASFQVTTVDSGSKALQFLGIHDDDASTVSVHAHQLDVAVN 127
Score = 59.3 bits (123), Expect(2) = 2e-024
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +1 / +2
Query: 433 DVAVNLIITDYCMPGMTGYDLLK 501
DVAVNLIITDYCMPGMTGYDLLK
Sbjct: 113 DVAVNLIITDYCMPGMTGYDLLK 181
>gb|CW467089.1|CW467089 fsbb001f218k03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f218k03, DNA
sequence
Length = 411
Score = 113 bits (242), Expect = 5e-024
Identities = 45/60 (75%), Positives = 55/60 (91%)
Frame = +1 / -3
Query: 469 MPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVRLSDMNKL 648
MPGMTGY+LLK +KESS LR+IPVVIMSSEN+P+RI RCLEEGA++F LKPVR SD+++L
Sbjct: 406 MPGMTGYELLKHVKESSELREIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDVSRL 227
>gb|CW319407.1|CW319407 104_812_11474472_116_35887_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474472, DNA
sequence
Length = 589
Score = 71.2 bits (149), Expect(5) = 8e-024
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = -2 / +3
Query: 676 CICFSVCGA*ACSCLIAAQVLGRTRQLLPPG 584
CICFSVCGA*ACSCLIAA VLG+TR LLPPG
Sbjct: 297 CICFSVCGA*ACSCLIAALVLGKTRPLLPPG 389
Score = 31.8 bits (63), Expect(5) = 8e-024
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -2 / +2
Query: 922 FCKSRANIYVTNQ*AK 875
FCKS ANI VTNQ*AK
Sbjct: 8 FCKSVANICVTNQ*AK 55
Score = 31.3 bits (62), Expect(5) = 8e-024
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2 / +3
Query: 730 WGSCVRHCDCHFAGAV 683
WG C R C CH AGAV
Sbjct: 222 WGYCNRCCCCHSAGAV 269
Score = 26.3 bits (51), Expect(5) = 8e-024
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2 / +3
Query: 802 AGARFLRCLHPFSCGC 755
+GA+F RC PF+ GC
Sbjct: 153 SGAKFPRCPLPFAFGC 200
Score = 23.5 bits (45), Expect(5) = 8e-024
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2 / +3
Query: 865 KRKGFSCTSQFSVNCALIC 809
KR G +Q + NCAL+C
Sbjct: 93 KRGG*LSYNQSAANCALVC 149
>gb|CW119569.1|CW119569 104_496_11108842_148_34633_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11108842, DNA
sequence
Length = 498
Score = 75.3 bits (158), Expect(3) = 3e-023
Identities = 29/32 (90%), Positives = 29/32 (90%)
Frame = +3 / -2
Query: 417 CGCQSGCGCEPDHHRLLHAWHDRI*PAQEDQG 512
CG QSGCG EPDHHRLLHA HDRI*PAQEDQG
Sbjct: 182 CG*QSGCGSEPDHHRLLHARHDRI*PAQEDQG 87
Score = 50.1 bits (103), Expect(3) = 3e-023
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1 / -2
Query: 322 VTTVDSGSKALQFLGLHDQDSTVP 393
VTTVDSGSKALQFLGLHD S VP
Sbjct: 380 VTTVDSGSKALQFLGLHDDHSPVP 309
Score = 23.1 bits (44), Expect(3) = 3e-023
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3 / -1
Query: 393 SCPHAPAG 416
SCPH PAG
Sbjct: 312 SCPHRPAG 289
>gb|CW429387.1|CW429387 fsbb001f142j21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f142j21, DNA
sequence
Length = 665
Score = 61.1 bits (127), Expect(3) = 3e-023
Identities = 22/27 (81%), Positives = 26/27 (96%)
Frame = +1 / +3
Query: 430 QDVAVNLIITDYCMPGMTGYDLLKKIK 510
Q++ VNLIITDYCMPGMTGYDLLK++K
Sbjct: 513 QEIDVNLIITDYCMPGMTGYDLLKRVK 593
Score = 55.6 bits (115), Expect(3) = 3e-023
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +1 / +3
Query: 211 SVMAAVATETPFHVLAVDDSLPDRKLIERLLKTSSFQ 321
+ M V E+ FHVLAVDDS+ DRKLIE LLK SS+Q
Sbjct: 3 AAMTVVDAESRFHVLAVDDSIVDRKLIEMLLKNSSYQ 113
Score = 36.3 bits (73), Expect(3) = 3e-023
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1 / +1
Query: 322 VTTVDSGSKALQFLGLHD 375
VTTVDSGSKAL+ LGL D
Sbjct: 292 VTTVDSGSKALELLGLRD 345
>gb|CW111273.1|CW111273 104_484_11104216_116_34532_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104216, DNA
sequence
Length = 499
Score = 71.6 bits (150), Expect(2) = 2e-022
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = +1 / -1
Query: 418 VAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPV 540
V QDVAVNLIITDYCMPGMTGYDLLKKIK + D+ V
Sbjct: 181 VGNKQDVAVNLIITDYCMPGMTGYDLLKKIKVCDNSHDVLV 59
Score = 58.8 bits (122), Expect(2) = 2e-022
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +1 / -3
Query: 322 VTTVDSGSKALQFLGLHDQDSTVPPVHTHQL 414
VTTVDSGSKALQFLG+HD D++ VH HQL
Sbjct: 398 VTTVDSGSKALQFLGIHDDDASTVSVHAHQL 306
>gb|CW188122.1|CW188122 104_607_11172854_116_36728_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11172854, DNA
sequence
Length = 665
Score = 96.4 bits (204), Expect(2) = 2e-022
Identities = 38/49 (77%), Positives = 45/49 (91%)
Frame = +1 / +2
Query: 442 VNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCL 588
VN+IITDY MPGMTGY+LL+ +KESS LR+IPVVIMSSEN+P+RI RCL
Sbjct: 518 VNMIITDYWMPGMTGYELLQHVKESSELREIPVVIMSSENVPTRITRCL 664
Score = 34.5 bits (69), Expect(2) = 2e-022
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1 / +2
Query: 247 HVLAVDDSLPDRKLIERLLKTSSFQ 321
HVLAVDDS DR +I ++L++S ++
Sbjct: 254 HVLAVDDSSVDRAVIAKILRSSKYR 328
>gb|CW137416.1|CW137416 104_523_11119279_148_34866_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11119279, DNA
sequence
Length = 610
Score = 89.0 bits (188), Expect(2) = 3e-022
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = +1 / +1
Query: 580 RCLEEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQ 696
RCLEEGADEFFLKPVRLSDMNKLKPHILKSRC + HQ+
Sbjct: 394 RCLEEGADEFFLKPVRLSDMNKLKPHILKSRCREHNHQE 510
Score = 73.0 bits (153), Expect(2) = 5e-021
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = -1 / -3
Query: 665 FSMWGLSLFMSDSRTGFRKNSSAPSSRHLL 576
FSMWGLSLFMSDSRTGFRKNSSAPSSRHL+
Sbjct: 479 FSMWGLSLFMSDSRTGFRKNSSAPSSRHLI 390
Score = 50.1 bits (103), Expect(2) = 5e-021
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -2 / -1
Query: 763 CGCLCYRCC*LWGSCVRHCDCHFAGAVPGCICFSVC 656
C C CC W C+ C CHFAGAVPG +C
Sbjct: 589 CCCYRCCCCCSWDYCIPRCCCHFAGAVPGDCALCIC 482
Score = 38.2 bits (77), Expect(2) = 3e-022
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +1 / +1
Query: 676 NQEQHQQSDSHSGERRNPTISSSDSINNRKRKGAG 780
+QEQ QQSDS+S E NPT SSS S ++ K + G
Sbjct: 502 HQEQLQQSDSNSEECSNPTSSSSSSGSSSKPQRKG 606
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,657,415,610
Number of Sequences: 832831
Number of extensions: 25130723
Number of successful extensions: 180697
Number of sequences better than 1.0e-020: 38
length of database: 163,786,556
effective HSP length: 56
effective length of database: 117,148,020
effective search space used: 45804875820
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)