TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478084.2.1
(1395 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN133080.1|CN133080 OX1_10_B10.b1_A002 Oxidatively-stres... 247 e-101
gb|CD224939.1|CD224939 CCC1_37_A04.b1_A007 Callus culture/c... 270 1e-090
gb|BG357389.1|BG357389 OV2_29_C07.g1_A002 Ovary 2 (OV2) Sor... 273 4e-090
gb|BG103087.1|BG103087 RHIZ2_18_A04.g1_A003 Rhizome2 (RHIZ2... 257 3e-082
gb|BZ332129.1|BZ332129 hx25e11.g1 WGS-SbicolorF (JM107 adap... 149 2e-076
gb|CD228356.1|CD228356 CCC1_7_A01.b1_A007 Callus culture/ce... 247 2e-069
gb|BG103256.1|BG103256 RHIZ2_18_A04.b1_A003 Rhizome2 (RHIZ2... 149 1e-067
gb|CX617349.1|CX617349 GABR1_33_E12.b1_A002 GA- or brassino... 247 6e-067
gb|BG102865.1|BG102865 RHIZ2_34_D03.b1_A003 Rhizome2 (RHIZ2... 149 1e-066
gb|AW285351.1|AW285351 LG1_244_C06.g1_A002 Light Grown 1 (L... 198 1e-065
gb|CX610190.1|CX610190 ANR1_17_E01.b1_A002 Anaerobic roots ... 246 5e-064
gb|AW287611.2|AW287611 LG1_244_C06.b1_A002 Light Grown 1 (L... 147 2e-063
gb|CX619836.1|CX619836 GABR1_48_D10.b1_A002 GA- or brassino... 243 4e-063
gb|BG051515.1|BG051515 FM1_57_E01.g1_A003 Floral-Induced Me... 205 4e-063
gb|BG102542.1|BG102542 RHIZ2_34_D03.g1_A003 Rhizome2 (RHIZ2... 202 2e-061
gb|BE355598.1|BE355598 DG1_115_H07.g1_A002 Dark Grown 1 (DG... 200 2e-059
gb|CN130798.1|CN130798 RHOH1_43_H02.g1_A002 Acid- and alkal... 99 3e-057
gb|CN130722.1|CN130722 RHOH1_43_H02.b1_A002 Acid- and alkal... 130 2e-055
gb|CD231568.1|CD231568 SS1_22_H03.b1_A012 Salt-stressed see... 213 5e-054
gb|BE355906.1|BE355906 DG1_11_D11.g1_A002 Dark Grown 1 (DG1... 206 5e-052
gb|CN133162.1|CN133162 OX1_10_B10.g1_A002 Oxidatively-stres... 126 5e-048
gb|CX617434.1|CX617434 GABR1_33_E12.g1_A002 GA- or brassino... 129 2e-046
gb|BG051195.1|BG051195 FM1_57_E01.b1_A003 Floral-Induced Me... 140 5e-042
gb|CF761981.1|CF761981 DSAF1_86_D08.b1_A011 Drought-stresse... 103 8e-041
gb|CW264819.1|CW264819 104_733_11231515_116_35255_068 Sorgh... 141 2e-034
gb|CW022568.1|CW022568 104_162_10431922_1_30008 Sorghum met... 100 5e-034
gb|CD429838.1|CD429838 ETH1_15_D11.g1_A002 Ethylene-treated... 100 4e-033
gb|CD231664.1|CD231664 SS1_22_H03.g1_A012 Salt-stressed see... 85 2e-031
gb|CX615617.1|CX615617 GABR1_21_E12.b1_A002 GA- or brassino... 100 2e-031
gb|CL155605.1|CL155605 104_341_10782265_114_31471_361 Sorgh... 84 6e-031
gb|CD220761.1|CD220761 CCC1_69_C10.b1_A007 Callus culture/c... 131 2e-029
gb|CW083258.1|CW083258 104_425_10944176_114_32389_024 Sorgh... 90 4e-028
gb|CW083257.1|CW083257 104_425_10944176_114_32353_024 Sorgh... 90 4e-028
gb|CX610480.1|CX610480 ANR1_19_B02.b1_A002 Anaerobic roots ... 71 4e-025
gb|CX616799.1|CX616799 GABR1_30_B03.b1_A002 GA- or brassino... 70 5e-025
gb|CX607149.1|CX607149 ANR1_7_A11.b1_A002 Anaerobic roots S... 70 5e-025
gb|CX609879.1|CX609879 ANR1_15_G02.b1_A002 Anaerobic roots ... 70 5e-025
gb|CW502316.1|CW502316 fsbb001f298j11k0 Sorghum methylation... 69 6e-025
gb|CN127986.1|CN127986 RHOH1_26_G01.b1_A002 Acid- and alkal... 69 1e-024
gb|CX610855.1|CX610855 ANR1_21_E10.b1_A002 Anaerobic roots ... 68 2e-024
gb|CW083259.1|CW083259 104_425_10944176_116_32357_024 Sorgh... 85 2e-024
gb|CW194898.1|CW194898 104_618_11180347_148_37428_076 Sorgh... 100 4e-024
gb|CW034021.1|CW034021 104_263_10502300_114_30359 Sorghum m... 66 8e-024
gb|CD222383.1|CD222383 CCC1_21_B05.g1_A007 Callus culture/c... 73 4e-023
gb|CX606141.1|CX606141 ANR1_1_H04.b1_A002 Anaerobic roots S... 62 9e-023
gb|CX607227.1|CX607227 ANR1_7_H10.b1_A002 Anaerobic roots S... 62 2e-022
gb|CN151897.1|CN151897 WOUND1_78_H11.b1_A002 Wounded leaves... 61 2e-022
gb|CW099235.1|CW099235 104_466_11003441_116_34380_077 Sorgh... 78 3e-022
gb|CX615267.1|CX615267 GABR1_19_D03.b1_A002 GA- or brassino... 60 6e-022
gb|CX610276.1|CX610276 ANR1_17_E01.g1_A002 Anaerobic roots ... 69 4e-021
gb|CW070914.1|CW070914 104_323_10591307_116_30454 Sorghum m... 66 5e-021
gb|CD222367.1|CD222367 CCC1_21_E12.g1_A007 Callus culture/c... 71 8e-021
>gb|CN133080.1|CN133080 OX1_10_B10.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_10_B10_A002 3', mRNA sequence
Length = 679
Score = 247 bits (534), Expect(2) = e-101
Identities = 104/128 (81%), Positives = 108/128 (84%)
Frame = -1 / +2
Query: 657 PLXXXXXXXXXXXXXXXVIQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLG 478
PL VIQ ALDRMD+ YCRSALDYLELQPDLSALVRGAHTFRCPNLG
Sbjct: 206 PLAEAGKVTSGLAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLG 385
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFR 298
LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSAN DGSLS+AISLQAEHMEKFR
Sbjct: 386 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFR 565
Query: 297 KLIYDF*S 274
KLI + *+
Sbjct: 566 KLICEV*T 589
Score = 176 bits (378), Expect(2) = 3e-060
Identities = 78/127 (61%), Positives = 85/127 (66%)
Frame = +2 / -2
Query: 290 MSFRNFSMCSACSEMATDRLPSRLALGSTXXXXXXXXXXXXXXTGRPHPKSASWMGRRTQ 469
+SFRNFSMCSAC E+A DRLPS ALG T TGRPHPKSASW+GRRTQ
Sbjct: 573 ISFRNFSMCSACKEIAMDRLPSPFALGRTNARPSYAIPPGPMNTGRPHPKSASWIGRRTQ 394
Query: 470 LVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRSNAAWITDXXXXXXXXXXXXX 649
LVSPR GHR VCAPRTSAD+SGCSSR*SSA+RQ SI S+A W+T
Sbjct: 393 LVSPRFGHRKVCAPRTSADKSGCSSR*SSAERQ*SLSILSSAPWMTAAPSASPLVTLPAS 214
Query: 650 XXGVAVK 670
GVAVK
Sbjct: 213 ASGVAVK 193
Score = 143 bits (307), Expect(2) = e-101
Identities = 56/65 (86%), Positives = 60/65 (92%)
Frame = -3 / +2
Query: 862 RSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYF 683
RSQ+ A EGAPRFSTYAVLAAHVW+C SLAR LP +QPTKLYCATDGRQRLQPPLP+GYF
Sbjct: 2 RSQLAAGEGAPRFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQRLQPPLPDGYF 181
Query: 682 GNVIF 668
GNVIF
Sbjct: 182 GNVIF 196
Score = 90.0 bits (190), Expect(3) = 6e-026
Identities = 36/75 (48%), Positives = 40/75 (53%)
Frame = -2 / +3
Query: 626 GWQRARP*SRPRWTGWTTGTAGQRWTTWSCSRTCRRWSAGRTRSGAPTWGSPAGCAXXXX 447
GWQ+ + SR W GWTT TA QRWTTWSC+R C+ W SGA T GSPAG A
Sbjct: 237 GWQKEQQSSREHWIGWTTTTAAQRWTTWSCNRICQHWCVEHIPSGART*GSPAGYAFLSM 416
Query: 446 XXXXXXXXXXSWAPA 402
SW A
Sbjct: 417 MPTSDGAVLCSWGQA 461
Score = 78.5 bits (165), Expect(2) = 3e-060
Identities = 33/45 (73%), Positives = 36/45 (80%)
Frame = +3 / -2
Query: 729 VAQYSLVGWSAGRPRARDAHRHTCAASTAYVLNRGAPSRAGTCER 863
VAQY+LVG S GR RAR+ H TCAA TAYVLNRGAPS A +CER
Sbjct: 135 VAQYNLVGCSGGRLRARETHFQTCAARTAYVLNRGAPSPAASCER 1
Score = 36.3 bits (73), Expect(3) = 6e-026
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -3 / +1
Query: 334 HLAAGGAHGEVPEAHLRLLISNSSPQV 254
+L AG AHGEVPEA+LR L S+P +
Sbjct: 529 YLFAG*AHGEVPEANLRSLNRMSAPTI 609
Score = 31.3 bits (62), Expect(3) = 6e-026
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2 / +1
Query: 827 VQHVRCAGGARVAVRVPGARPAGRPAHQAVLRH 729
VQH+R + + + +P +P HQ VLRH
Sbjct: 37 VQHIRSSSSTCLEMCLPCTQPTS*TTHQVVLRH 135
>gb|CD224939.1|CD224939 CCC1_37_A04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_37_A04_A007 3', mRNA sequence
Length = 670
Score = 270 bits (584), Expect(3) = 1e-090
Identities = 112/127 (88%), Positives = 116/127 (91%)
Frame = -1 / +2
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
IQAALDRMDDGYCRS LDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR
Sbjct: 23 IQAALDRMDDGYCRSPLDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 202
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPTPPHKSSVP 244
PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SP+ +
Sbjct: 203 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPSSSQEVVST 382
Query: 243 VRATQRS 223
+ + RS
Sbjct: 383 IPTSTRS 403
Score = 228 bits (493), Expect(5) = 2e-082
Identities = 97/116 (83%), Positives = 99/116 (85%)
Frame = +2 / -2
Query: 260 WGGVGDQKS*MSFRNFSMCSACSEMATDRLPSRLALGSTXXXXXXXXXXXXXXTGRPHPK 439
W +GDQKS*MSFRNFSMCSACSEMATDRLPSRLALGST TGRPHPK
Sbjct: 366 WEELGDQKS*MSFRNFSMCSACSEMATDRLPSRLALGSTNASPSYAMPPGPMNTGRPHPK 187
Query: 440 SASWMGRRTQLVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRSNAAWIT 607
SASWMGRRTQLVSPRLGHRNVCAPRTSADRSGCSSR*SS DRQYPSSIRS+AAWIT
Sbjct: 186 SASWMGRRTQLVSPRLGHRNVCAPRTSADRSGCSSR*SSGDRQYPSSIRSSAAWIT 19
Score = 161 bits (347), Expect(4) = 2e-063
Identities = 62/80 (77%), Positives = 64/80 (80%)
Frame = -2 / +3
Query: 623 WQRARP*SRPRWTGWTTGTAGQRWTTWSCSRTCRRWSAGRTRSGAPTWGSPAGCAXXXXX 444
W+RARP*SR RWTGWTTGTAG+RWTTWSCSRTCRRWSAGRTRSGAPTWGSPAGCA
Sbjct: 3 WRRARP*SRRRWTGWTTGTAGRRWTTWSCSRTCRRWSAGRTRSGAPTWGSPAGCACPSTT 182
Query: 443 XXXXXXXXXSWAPAASPTRG 384
SWAPAAS TRG
Sbjct: 183 RTSGGAGPCSWAPAASRTRG 242
Score = 114 bits (244), Expect(4) = 5e-046
Identities = 53/86 (61%), Positives = 55/86 (63%)
Frame = +1 / -1
Query: 259 VGRSWRSEVVDELPELLHVLRLQRDXXXXXXXXXXXXXXXREPLVGDXXXXXXXXXXXXX 438
+G + RSEVVDELPELLHVLRLQRD REPLV D
Sbjct: 367 LGGARRSEVVDELPELLHVLRLQRDGHGQAAVAVGAGEHEREPLVRDAAGAHEHGPAPPE 188
Query: 439 VRVVDGQAHPAGEPQVGAPERVRPAD 516
VRVVDGQAHPAGEPQVGAPERVRPAD
Sbjct: 187 VRVVDGQAHPAGEPQVGAPERVRPAD 110
Score = 68.0 bits (142), Expect(3) = 1e-090
Identities = 28/38 (73%), Positives = 29/38 (76%)
Frame = -2 / +2
Query: 206 *VAAIFFDFTHSSCTLFRSCLPPLGRAHTFCAELFTSP 93
*VAA FFDFTHSSCTL RSCLPPLGR +TF L P
Sbjct: 494 *VAARFFDFTHSSCTLSRSCLPPLGRVYTFLCRLVYEP 607
Score = 64.8 bits (135), Expect(4) = 5e-046
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = +3 / -1
Query: 117 KGMRPAQRGQAGTEKCAGTMCEIKEYCCNLLPTVS 221
K + PAQRGQA T KCAGTMCEIKE CCNL T S
Sbjct: 583 KSIHPAQRGQARTGKCAGTMCEIKESCCNLRSTPS 479
Score = 64.3 bits (134), Expect(5) = 2e-082
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +1 / -2
Query: 115 QKVCALPKGGRQERKSVQELCVKSKNIAATY 207
+KV LPKGGRQER+SVQELCVKSKN+AATY
Sbjct: 585 KKVYTLPKGGRQERESVQELCVKSKNLAATY 493
Score = 63.8 bits (133), Expect(4) = 3e-023
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +2 / -3
Query: 116 KRYAPCPKGAGRNGKVCRNYV*NQRI 193
K+Y PCPKGAG+NGKVCRNYV*NQRI
Sbjct: 584 KKYTPCPKGAGKNGKVCRNYV*NQRI 507
Score = 62.0 bits (129), Expect(4) = 2e-063
Identities = 28/44 (63%), Positives = 31/44 (70%)
Frame = -3 / +3
Query: 220 ETVGSRLQQYSLISHIVPAHFSVPACPLWAGRIPFVPNYLRAPA 89
E V RLQQ SLISHIVPAHF V ACPLWAG I F + +P+
Sbjct: 480 EGVLRRLQQDSLISHIVPAHFPVLACPLWAGCILFCAVWFTSPS 611
Score = 54.2 bits (112), Expect(4) = 2e-063
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = -3 / +1
Query: 334 HLAAGGAHGEVPEAHLRLLISNSSPQ 257
HLAAGGAHGEVPEAHLRLLIS P+
Sbjct: 292 HLAAGGAHGEVPEAHLRLLISELLPR 369
Score = 47.8 bits (98), Expect(4) = 3e-023
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +3 / -3
Query: 261 GEELEIRSRR*ASGTSPCAPPAA 329
G EIRSRR*ASGTSPCAPPAA
Sbjct: 365 GRSSEIRSRR*ASGTSPCAPPAA 297
Score = 40.9 bits (83), Expect(5) = 2e-082
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +2 / -2
Query: 68 IVHSSYNCRGS*IIRHKRYAPCPKG 142
IVHSSYNC GS* RHK+ PKG
Sbjct: 633 IVHSSYNCWGS*TKRHKKVYTLPKG 559
Score = 40.5 bits (82), Expect(4) = 5e-046
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +3 / -3
Query: 69 LFIHHTIAGARK*FGTKGMRPAQRG 143
LFIHHTIAGARK GTK P +G
Sbjct: 632 LFIHHTIAGARKPNGTKKYTPCPKG 558
Score = 37.7 bits (76), Expect(4) = 3e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / -3
Query: 453 WAGAPSW*APGW 488
WAGAPSW*APGW
Sbjct: 173 WAGAPSW*APGW 138
Score = 36.8 bits (74), Expect(3) = 1e-090
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -1 / +2
Query: 117 LCRIIYEPLQLYDE*TM 67
LCR++YEP QLYDE*T+
Sbjct: 584 LCRLVYEPQQLYDE*TI 634
Score = 28.6 bits (56), Expect(5) = 2e-082
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1 / -3
Query: 193 IAATYSQRSLASLCCAYW 246
+ A + S ASLCCAYW
Sbjct: 443 LPAPLATASSASLCCAYW 390
Score = 24.4 bits (47), Expect(4) = 2e-063
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2 / +1
Query: 254 HQYQYAQHKEARD 216
H QYAQH+EA +
Sbjct: 382 HTNQYAQHREAEE 420
Score = 23.5 bits (45), Expect(4) = 5e-046
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1 / -3
Query: 199 ATYSQRSLASLCCAYWY**LVGRS 270
AT S SL WY* L+GRS
Sbjct: 428 ATASSASLCCAYWLVWY*RLLGRS 357
Score = 22.1 bits (42), Expect(5) = 2e-082
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / -1
Query: 598 LDHGRALCH 624
LDHGRAL H
Sbjct: 28 LDHGRALRH 2
Score = 22.1 bits (42), Expect(4) = 3e-023
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -1
Query: 85 QLQGLVNNSAQK 120
QL GLVN +AQK
Sbjct: 616 QLLGLVNQTAQK 581
>gb|BG357389.1|BG357389 OV2_29_C07.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 682
Score = 273 bits (590), Expect(3) = 4e-090
Identities = 116/145 (80%), Positives = 120/145 (82%)
Frame = -1 / +1
Query: 657 PLXXXXXXXXXXXXXXXVIQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLG 478
PL VIQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLG
Sbjct: 16 PLANAGTVTAGVAEGAPVIQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLG 195
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFR 298
LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFR
Sbjct: 196 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFR 375
Query: 297 KLIYDF*SPTPPHKSSVPVRATQRS 223
KLIYDF*SP+ + + + RS
Sbjct: 376 KLIYDF*SPSSSQEVVSTIPTSTRS 450
Score = 236 bits (510), Expect(4) = 2e-084
Identities = 103/137 (75%), Positives = 105/137 (76%)
Frame = +2 / -3
Query: 260 WGGVGDQKS*MSFRNFSMCSACSEMATDRLPSRLALGSTXXXXXXXXXXXXXXTGRPHPK 439
W +GDQKS*MSFRNFSMCSACSEMATDRLPSRLALGST TGRPHPK
Sbjct: 413 WEELGDQKS*MSFRNFSMCSACSEMATDRLPSRLALGSTNASPSYAMPPGPMNTGRPHPK 234
Query: 440 SASWMGRRTQLVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRSNAAWITDXXX 619
SASWMGRRTQLVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRS+AAWIT
Sbjct: 233 SASWMGRRTQLVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRSSAAWITGAPS 54
Query: 620 XXXXXXXXXXXXGVAVK 670
GVAVK
Sbjct: 53 ATPAVTVPAFASGVAVK 3
Score = 164 bits (353), Expect(5) = 2e-069
Identities = 63/81 (77%), Positives = 65/81 (80%)
Frame = -2 / +2
Query: 626 GWQRARP*SRPRWTGWTTGTAGQRWTTWSCSRTCRRWSAGRTRSGAPTWGSPAGCAXXXX 447
GW+RARP*SR RWTGWTTGTAG+RWTTWSCSRTCRRWSAGRTRSGAPTWGSPAGCA
Sbjct: 47 GWRRARP*SRRRWTGWTTGTAGRRWTTWSCSRTCRRWSAGRTRSGAPTWGSPAGCACPST 226
Query: 446 XXXXXXXXXXSWAPAASPTRG 384
SWAPAAS TRG
Sbjct: 227 TRTSGGAGPCSWAPAASRTRG 289
Score = 114 bits (244), Expect(4) = 9e-048
Identities = 53/86 (61%), Positives = 55/86 (63%)
Frame = +1 / -2
Query: 259 VGRSWRSEVVDELPELLHVLRLQRDXXXXXXXXXXXXXXXREPLVGDXXXXXXXXXXXXX 438
+G + RSEVVDELPELLHVLRLQRD REPLV D
Sbjct: 414 LGGARRSEVVDELPELLHVLRLQRDGHGQAAVAVGAGEHEREPLVRDAAGAHEHGPAPPE 235
Query: 439 VRVVDGQAHPAGEPQVGAPERVRPAD 516
VRVVDGQAHPAGEPQVGAPERVRPAD
Sbjct: 234 VRVVDGQAHPAGEPQVGAPERVRPAD 157
Score = 59.3 bits (123), Expect(4) = 2e-084
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = +2 / -1
Query: 68 IVHSSYNCRGS*IIRHKRYAPCPKGAGRNGK 160
IVHSSYNC GS* RHK+Y PCP+G R GK
Sbjct: 667 IVHSSYNCWGS*TKRHKKYTPCPRGQARTGK 575
Score = 57.9 bits (120), Expect(3) = 8e-022
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +3 / -1
Query: 117 KGMRPAQRGQAGTEKCAGTMCEIKEYCCNLLPTVS 221
K P RGQA T KCAGTMCEIKE CCNL T S
Sbjct: 619 KKYTPCPRGQARTGKCAGTMCEIKESCCNLRSTPS 515
Score = 54.2 bits (112), Expect(5) = 2e-069
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = -3 / +3
Query: 334 HLAAGGAHGEVPEAHLRLLISNSSPQ 257
HLAAGGAHGEVPEAHLRLLIS P+
Sbjct: 339 HLAAGGAHGEVPEAHLRLLISELLPR 416
Score = 53.8 bits (111), Expect(4) = 2e-084
Identities = 21/24 (87%), Positives = 24/24 (100%)
Frame = +1 / -2
Query: 136 KGGRQERKSVQELCVKSKNIAATY 207
+GGRQER+SVQELCVKSKN+AATY
Sbjct: 600 QGGRQERESVQELCVKSKNLAATY 529
Score = 51.9 bits (107), Expect(3) = 4e-090
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -2 / +2
Query: 206 *VAAIFFDFTHSSCTLFRSCLPP 138
*VAA FFDFTHSSCTL RSCLPP
Sbjct: 530 *VAARFFDFTHSSCTLSRSCLPP 598
Score = 50.1 bits (103), Expect(4) = 9e-048
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2 / -3
Query: 134 PKGAGRNGKVCRNYV*NQRI 193
PKGAG+NGKVCRNYV*NQRI
Sbjct: 602 PKGAGKNGKVCRNYV*NQRI 543
Score = 49.6 bits (102), Expect(5) = 2e-069
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / +3
Query: 220 ETVGSRLQQYSLISHIVPAHFSVPACPLWAG 128
E V RLQQ SLISHIVPAHF V ACPL G
Sbjct: 516 EGVLRRLQQDSLISHIVPAHFPVLACPLGQG 608
Score = 48.7 bits (100), Expect(3) = 4e-090
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -2 / +1
Query: 140 PLGRAHTFCAELFTSPCNCMMNEQ 69
PLGR + FCA FTSP NCMMNEQ
Sbjct: 595 PLGRVYIFCAVWFTSPSNCMMNEQ 666
Score = 47.8 bits (98), Expect(5) = 2e-069
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -1 / +3
Query: 135 GQGAYLLCRIIYEPLQLYDE*TM 67
GQG Y LCR++YEP QLYDE*T+
Sbjct: 600 GQGVYFLCRLVYEPQQLYDE*TI 668
Score = 47.8 bits (98), Expect(3) = 8e-022
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +3 / -1
Query: 261 GEELEIRSRR*ASGTSPCAPPAA 329
G EIRSRR*ASGTSPCAPPAA
Sbjct: 412 GRSSEIRSRR*ASGTSPCAPPAA 344
Score = 46.4 bits (95), Expect(4) = 9e-048
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +3 / -2
Query: 69 LFIHHTIAGARK*FGTKGMRPAQRGQAGTE 158
LFIHHTIAGARK GTK + PAQ G+ E
Sbjct: 666 LFIHHTIAGARKPNGTKNIHPAQGGRQERE 577
Score = 44.1 bits (90), Expect(4) = 9e-048
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1 / -2
Query: 598 LDHGRALCHPGRHRAGVGQ 654
LDHGRAL HPGRHRAGV Q
Sbjct: 75 LDHGRALRHPGRHRAGVRQ 19
Score = 37.7 bits (76), Expect(3) = 8e-022
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / -1
Query: 453 WAGAPSW*APGW 488
WAGAPSW*APGW
Sbjct: 220 WAGAPSW*APGW 185
Score = 24.4 bits (47), Expect(5) = 2e-069
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2 / +3
Query: 254 HQYQYAQHKEARD 216
H QYAQH+EA +
Sbjct: 429 HTNQYAQHREAEE 467
Score = 23.5 bits (45), Expect(4) = 2e-084
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1 / -1
Query: 199 ATYSQRSLASLCCAYWY**LVGRS 270
AT S SL WY* L+GRS
Sbjct: 475 ATASSASLCCAYWLVWY*RLLGRS 404
>gb|BG103087.1|BG103087 RHIZ2_18_A04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 568
Score = 257 bits (555), Expect(4) = 3e-082
Identities = 104/105 (99%), Positives = 105/105 (100%)
Frame = -1 / +3
Query: 582 MDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPG 403
MDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPG
Sbjct: 3 MDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPG 182
Query: 402 GIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPT 268
GIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SP+
Sbjct: 183 GIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPS 317
Score = 213 bits (459), Expect(3) = 7e-072
Identities = 91/108 (84%), Positives = 92/108 (85%)
Frame = +2 / -1
Query: 260 WGGVGDQKS*MSFRNFSMCSACSEMATDRLPSRLALGSTXXXXXXXXXXXXXXTGRPHPK 439
W +GDQKS*MSFRNFSMCSACSEMATDRLPSRLALGST TGRPHPK
Sbjct: 325 WEELGDQKS*MSFRNFSMCSACSEMATDRLPSRLALGSTNASPSYAMPPGPMNTGRPHPK 146
Query: 440 SASWMGRRTQLVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSI 583
SASWMGRRTQLVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSI
Sbjct: 145 SASWMGRRTQLVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSI 2
Score = 133 bits (286), Expect(3) = 7e-048
Identities = 51/67 (76%), Positives = 52/67 (77%)
Frame = -2 / +1
Query: 584 GWTTGTAGQRWTTWSCSRTCRRWSAGRTRSGAPTWGSPAGCAXXXXXXXXXXXXXXSWAP 405
GWTTGTAG+RWTTWSCSRTCRRWSAGRTRSGAPTWGSPAGCA SWAP
Sbjct: 1 GWTTGTAGRRWTTWSCSRTCRRWSAGRTRSGAPTWGSPAGCACPSTTRTSGGAAPCSWAP 180
Query: 404 AASPTRG 384
AAS TRG
Sbjct: 181 AASRTRG 201
Score = 122 bits (260), Expect(2) = 4e-035
Identities = 54/86 (62%), Positives = 56/86 (65%)
Frame = +1 / -3
Query: 259 VGRSWRSEVVDELPELLHVLRLQRDXXXXXXXXXXXXXXXREPLVGDXXXXXXXXXXXXX 438
+G +WRSEVVDELPELLHVLRLQRD REPLV D
Sbjct: 326 LGGAWRSEVVDELPELLHVLRLQRDGHGQAAVAVGAGEHEREPLVRDAAGAHEHGAAPPE 147
Query: 439 VRVVDGQAHPAGEPQVGAPERVRPAD 516
VRVVDGQAHPAGEPQVGAPERVRPAD
Sbjct: 146 VRVVDGQAHPAGEPQVGAPERVRPAD 69
Score = 54.2 bits (112), Expect(3) = 7e-048
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = -3 / +2
Query: 334 HLAAGGAHGEVPEAHLRLLISNSSPQ 257
HLAAGGAHGEVPEAHLRLLIS P+
Sbjct: 251 HLAAGGAHGEVPEAHLRLLISKLLPR 328
Score = 53.8 bits (111), Expect(3) = 7e-072
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +2 / -1
Query: 83 YNCRGS*IIRHKRYAPCPKGAGRNGK 160
YNC GS* IRHK+ PCPKGAG+NG+
Sbjct: 565 YNCWGS*TIRHKKVTPCPKGAGKNGE 488
Score = 48.7 bits (100), Expect(2) = 4e-035
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +1 / -1
Query: 115 QKVCALPKGGRQERKSVQELCVKSKNIAATY 207
+KV PKG + +SVQELCVKSKN+AATY
Sbjct: 532 KKVTPCPKGAGKNGESVQELCVKSKNLAATY 440
Score = 47.8 bits (98), Expect(4) = 3e-082
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -2 / +1
Query: 155 RSCLPPLGRAHTFCAELFTSPCNCM 81
RSCLPPLGR FCA FTSP NC+
Sbjct: 493 RSCLPPLGRV*LFCAVWFTSPSNCI 567
Score = 45.5 bits (93), Expect(3) = 7e-072
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +3 / -3
Query: 141 GQAGTEKCAGTMCEIKEYCCNLLPTVS 221
G+ KCAGTMCEIKE CCNL T S
Sbjct: 506 GRQERGKCAGTMCEIKESCCNLRSTPS 426
Score = 43.7 bits (89), Expect(3) = 7e-048
Identities = 20/38 (52%), Positives = 22/38 (57%)
Frame = -2 / +3
Query: 206 *VAAIFFDFTHSSCTLFRSCLPPLGRAHTFCAELFTSP 93
*VAA FFDFTHSSCTL P G+ TF + P
Sbjct: 441 *VAARFFDFTHSSCTLSPFLPAPFGQGVTFLCRMVYEP 554
Score = 37.7 bits (76), Expect(4) = 3e-082
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 220 ETVGSRLQQYSLISHIVPAHFSVPACP 140
E V RLQQ SLISHIVPAHF P
Sbjct: 427 EGVLRRLQQDSLISHIVPAHFPRSCLP 507
Score = 23.1 bits (44), Expect(4) = 3e-082
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2 / +2
Query: 272 QLLPTSHQYQYAQHKEAR 219
+LLP SHQY Q+ + +
Sbjct: 314 KLLPRSHQYHTNQYAQKK 367
>gb|BZ332129.1|BZ332129 hx25e11.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx25e11 5', DNA sequence
Length = 463
Score = 149 bits (321), Expect(3) = 2e-076
Identities = 59/59 (100%), Positives = 59/59 (100%)
Frame = -3 / +2
Query: 844 REGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVIF 668
REGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVIF
Sbjct: 254 REGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVIF 430
Score = 125 bits (267), Expect(3) = 4e-070
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +2 / -1
Query: 668 KDHVAEVALRKRRLQPLPPVRGAVQLGGLVGRQAARQGRAPPHVRRQHSVRAEPRRALA 844
+DHVAEVAL KRRLQPLP VRGAVQLGGLV RQAARQGRAPPHVRRQH VRAEPRRALA
Sbjct: 430 EDHVAEVALGKRRLQPLPAVRGAVQLGGLVRRQAARQGRAPPHVRRQHRVRAEPRRALA 254
Score = 110 bits (234), Expect(2) = 5e-045
Identities = 44/61 (72%), Positives = 46/61 (75%)
Frame = -3 / +2
Query: 1087 WADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAMLSEPPQAALTSKPATPPT 908
WADLCRGVPIA MPFIDRSLLRARDPP P YPH+EYQPAPAMLS P A + P
Sbjct: 2 WADLCRGVPIAVMPFIDRSLLRARDPPAPVYPHVEYQPAPAMLSSEPPQAALTAKPATPP 181
Query: 907 A 905
A
Sbjct: 182 A 184
Score = 99.1 bits (210), Expect(3) = 4e-070
Identities = 41/50 (82%), Positives = 41/50 (82%)
Frame = +3 / -2
Query: 939 AACGGSDSMAGAGWYSMCG*PGVGGSRARRSDRSMKGMPAIGTPRQRSAH 1088
A G DSMAGAGWYS CG* G GGSRARR DRSMKGM AIGTPRQRSAH
Sbjct: 150 ACGGSEDSMAGAGWYSTCG*TGAGGSRARRRDRSMKGMTAIGTPRQRSAH 1
Score = 98.2 bits (208), Expect(4) = 2e-040
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +3 / -2
Query: 729 VAQYSLVGWSAGRPRARDAHRHTCAASTAYVLNRGAPSRA 848
VAQYSLVGWSAGRPRARDAHRHTCAASTAYVLNRGAPSR+
Sbjct: 369 VAQYSLVGWSAGRPRARDAHRHTCAASTAYVLNRGAPSRS 250
Score = 93.6 bits (198), Expect(2) = 5e-045
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = -1 / +3
Query: 816 TLCWRRTCGGARPWRAACRPTSPPSCTAPRTGGSGC 709
T CWRRTCGGARPWRAACR TSPPSCTAPRT GSGC
Sbjct: 282 TRCWRRTCGGARPWRAACRRTSPPSCTAPRTAGSGC 389
Score = 92.7 bits (196), Expect(3) = 2e-076
Identities = 39/50 (78%), Positives = 40/50 (80%)
Frame = -2 / +1
Query: 1088 VGGPLPRRPDRRHALH*PVAPPRARSADPGLPAHRVPAGARHAI*AATGG 939
VGGPLP RPDRRHALH*PV PPRA A PGLPA RVPAGARHA+ A G
Sbjct: 1 VGGPLPWRPDRRHALH*PVPPPRA*PAGPGLPARRVPAGARHAVLRAATG 150
Score = 84.9 bits (179), Expect(3) = 2e-076
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = -3 / +2
Query: 958 SEPPQAALTSKPATPPTAVAIFKLSRAELVRLRSQVPARE 839
SEPPQAALT+KPATPP AVAIFKLSRAEL RLRSQVPARE
Sbjct: 134 SEPPQAALTAKPATPPAAVAIFKLSRAELGRLRSQVPARE 253
Score = 82.2 bits (173), Expect(3) = 4e-070
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +3 / -2
Query: 840 SRAGTCERRRTSSARESLKIATAVGGVAGLDVRAACGGSD 959
SRAGTCERRR SSARESLK+ATA GGVAGL VRAACGGS+
Sbjct: 252 SRAGTCERRRPSSARESLKMATAAGGVAGLAVRAACGGSE 133
Score = 81.7 bits (172), Expect(3) = 7e-023
Identities = 36/46 (78%), Positives = 36/46 (78%)
Frame = -2 / +1
Query: 827 VQHVRCAGGARVAVRVPGARPAGRPAHQAVLRHGRXXXXXXXASGG 690
VQHVR AGGARVAVRVPGARPAG PAHQAVLRHGR AS G
Sbjct: 271 VQHVRGAGGARVAVRVPGARPAGGPAHQAVLRHGRPAAAAAAASRG 408
Score = 44.1 bits (90), Expect(4) = 2e-040
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +2 / -1
Query: 836 ALARGDLRTEADELGAGELEDSH 904
ALARGDLRT+A +LGAGELED +
Sbjct: 256 ALARGDLRTQAAQLGAGELEDGN 188
Score = 42.8 bits (87), Expect(3) = 7e-023
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / +1
Query: 953 AATGGPHVQAGDAAHSRGYLQAL 885
AATGGPH QAGDAA R +LQAL
Sbjct: 139 AATGGPHGQAGDAARGRCHLQAL 207
Score = 42.3 bits (86), Expect(4) = 2e-040
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2 / -1
Query: 1034 PVNEGHAGDRDAAAEVRP 1087
PVNEGH GDRDA AEVRP
Sbjct: 55 PVNEGHDGDRDATAEVRP 2
Score = 40.0 bits (81), Expect(4) = 2e-040
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +1 / -3
Query: 940 PPVAAQIAWRAPAGTRCAGSPGSA 1011
P A + AWRAPAGTR AG PG A
Sbjct: 149 PVAARRTAWRAPAGTRRAGRPGPA 78
Score = 22.6 bits (43), Expect(3) = 7e-023
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1 / +3
Query: 1056 PACPSLTG 1033
P+CPSLTG
Sbjct: 33 PSCPSLTG 56
>gb|CD228356.1|CD228356 CCC1_7_A01.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_7_A01_A007 3', mRNA sequence
Length = 532
Score = 247 bits (534), Expect(2) = 2e-069
Identities = 104/128 (81%), Positives = 108/128 (84%)
Frame = -1 / +1
Query: 657 PLXXXXXXXXXXXXXXXVIQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLG 478
PL VIQ ALDRMD+ YCRSALDYLELQPDLSALVRGAHTFRCPNLG
Sbjct: 52 PLAEAGKVTSGLAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLG 231
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFR 298
LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSAN DGSLS+AISLQAEHMEKFR
Sbjct: 232 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFR 411
Query: 297 KLIYDF*S 274
KLI + *+
Sbjct: 412 KLICEV*T 435
Score = 176 bits (378), Expect = 9e-043
Identities = 78/127 (61%), Positives = 85/127 (66%)
Frame = +2 / -3
Query: 290 MSFRNFSMCSACSEMATDRLPSRLALGSTXXXXXXXXXXXXXXTGRPHPKSASWMGRRTQ 469
+SFRNFSMCSAC E+A DRLPS ALG T TGRPHPKSASW+GRRTQ
Sbjct: 419 ISFRNFSMCSACKEIAMDRLPSPFALGRTNARPSYAIPPGPMNTGRPHPKSASWIGRRTQ 240
Query: 470 LVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRSNAAWITDXXXXXXXXXXXXX 649
LVSPR GHR VCAPRTSAD+SGCSSR*SSA+RQ SI S+A W+T
Sbjct: 239 LVSPRFGHRKVCAPRTSADKSGCSSR*SSAERQ*SLSILSSAPWMTAAPSASPLVTLPAS 60
Query: 650 XXGVAVK 670
GVAVK
Sbjct: 59 ASGVAVK 39
Score = 90.0 bits (190), Expect(2) = 6e-022
Identities = 36/75 (48%), Positives = 40/75 (53%)
Frame = -2 / +2
Query: 626 GWQRARP*SRPRWTGWTTGTAGQRWTTWSCSRTCRRWSAGRTRSGAPTWGSPAGCAXXXX 447
GWQ+ + SR W GWTT TA QRWTTWSC+R C+ W SGA T GSPAG A
Sbjct: 83 GWQKEQQSSREHWIGWTTTTAAQRWTTWSCNRICQHWCVEHIPSGART*GSPAGYAFLSM 262
Query: 446 XXXXXXXXXXSWAPA 402
SW A
Sbjct: 263 MPTSDGAVLCSWGQA 307
Score = 38.2 bits (77), Expect(2) = 2e-069
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = -3 / +1
Query: 709 QPPLPEGYFGNVIF 668
QPPLP+GYFGNVIF
Sbjct: 1 QPPLPDGYFGNVIF 42
Score = 36.3 bits (73), Expect(2) = 6e-022
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -3 / +3
Query: 334 HLAAGGAHGEVPEAHLRLLISNSSPQV 254
+L AG AHGEVPEA+LR L S+P +
Sbjct: 375 YLFAG*AHGEVPEANLRSLNRMSAPTI 455
>gb|BG103256.1|BG103256 RHIZ2_18_A04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 457
Score = 149 bits (321), Expect(2) = 4e-041
Identities = 60/77 (77%), Positives = 62/77 (80%)
Frame = -3 / +2
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAMLS 956
QHHVA GFSGLHFINSWADLCRGVPIA MPFIDRSLLRARDPPTP YPH+EYQPAPAMLS
Sbjct: 86 QHHVADGFSGLHFINSWADLCRGVPIAVMPFIDRSLLRARDPPTPVYPHVEYQPAPAMLS 265
Query: 955 EPPQAALTSKPATPPTA 905
P A + P A
Sbjct: 266 SEPPQAALTAKPATPPA 316
Score = 135 bits (289), Expect(4) = 1e-067
Identities = 54/65 (83%), Positives = 55/65 (84%)
Frame = +3 / -2
Query: 939 AACGGSDSMAGAGWYSMCG*PGVGGSRARRSDRSMKGMPAIGTPRQRSAHELMKCSPEKP 1118
A G DSMAGAGWYS CG* GVGGSRARR +RSMKGM AIGTPRQRSAHELMKC PEKP
Sbjct: 282 ACGGSEDSMAGAGWYSTCG*TGVGGSRARRRERSMKGMTAIGTPRQRSAHELMKCRPEKP 103
Query: 1119 PATWC 1133
ATWC
Sbjct: 102 SATWC 88
Score = 127 bits (273), Expect(4) = 2e-066
Identities = 53/65 (81%), Positives = 55/65 (84%)
Frame = -2 / +1
Query: 1133 APRGRRLLRTALHQLVGGPLPRRPDRRHALH*PVAPPRARSADPGLPAHRVPAGARHAI* 954
APR RRLLR ALHQLVGGPLPRRPDRRHALH*P+ PPRA ADPGLPA RVPAGARHA+
Sbjct: 88 APRSRRLLRPALHQLVGGPLPRRPDRRHALH*PLPPPRA*PADPGLPARRVPAGARHAVL 267
Query: 953 AATGG 939
A G
Sbjct: 268 RAAAG 282
Score = 84.9 bits (179), Expect(4) = 2e-066
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = -3 / +2
Query: 958 SEPPQAALTSKPATPPTAVAIFKLSRAELVRLRSQVPARE 839
SEPPQAALT+KPATPP AVAIFKLSRAEL RLRSQVPARE
Sbjct: 266 SEPPQAALTAKPATPPAAVAIFKLSRAELGRLRSQVPARE 385
Score = 80.3 bits (169), Expect(4) = 1e-067
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = +3 / -2
Query: 840 SRAGTCERRRTSSARESLKIATAVGGVAGLDVRAACGGSD 959
SRAGTCERRR SSARESLK+ATA GGVAG VRAACGGS+
Sbjct: 384 SRAGTCERRRPSSARESLKMATAAGGVAGFAVRAACGGSE 265
Score = 70.7 bits (148), Expect(5) = 1e-042
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +2 / -1
Query: 1037 VNEGHAGDRDAAAEVRPRVDEVQSGEAAGHVVL 1135
VNEGH GDRDAAAEVRPRVDEVQ+GEA G+VVL
Sbjct: 184 VNEGHDGDRDAAAEVRPRVDEVQAGEAVGYVVL 86
Score = 59.3 bits (123), Expect(4) = 2e-066
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = -3 / +2
Query: 844 REGAPRFSTYAVLAAHVWRCASLA 773
REGAPRFSTYAVLAAHVWRCA LA
Sbjct: 386 REGAPRFSTYAVLAAHVWRCAXLA 457
Score = 58.3 bits (121), Expect(4) = 1e-067
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / -2
Query: 774 ARDAHRHTCAASTAYVLNRGAPSRA 848
AR AHRHTCAASTAYVLNRGAPSR+
Sbjct: 456 ARXAHRHTCAASTAYVLNRGAPSRS 382
Score = 55.1 bits (114), Expect(5) = 1e-042
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +2 / -1
Query: 773 RQGRAPPHVRRQHSVRAEPRRALA 844
RQ RAPPHVRRQH VRAEPRRALA
Sbjct: 457 RQXRAPPHVRRQHXVRAEPRRALA 386
Score = 47.3 bits (97), Expect(5) = 1e-042
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +2 / -1
Query: 836 ALARGDLRTEADELGAGELEDSH 904
ALARGDLRT+A +LGAGELED H
Sbjct: 388 ALARGDLRTQAAQLGAGELEDGH 320
Score = 42.8 bits (87), Expect(4) = 1e-067
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +1 / -2
Query: 1162 PHLKWVTWSTSSGKEEMSS 1218
PHLKWVTWSTSSGK SS
Sbjct: 60 PHLKWVTWSTSSGKAVSSS 4
Score = 42.8 bits (87), Expect(5) = 1e-042
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +1 / -3
Query: 940 PPVAAQIAWRAPAGTRCAGSPGSA 1011
P A + AWRAPAGTR AG PGSA
Sbjct: 281 PAAARRTAWRAPAGTRRAGRPGSA 210
Score = 40.9 bits (83), Expect(2) = 4e-041
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -2 / +1
Query: 827 VQHVRCAGGARVAVRVPG 774
VQHVR AGGARVAVRVPG
Sbjct: 403 VQHVRXAGGARVAVRVPG 456
Score = 40.5 bits (82), Expect(4) = 2e-066
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = -2 / +2
Query: 1217 DDISSFPLLVLQVTHFKWGFFFFGEGM 1137
+D ++FPLLVLQVTHFK G G GM
Sbjct: 5 EDDTAFPLLVLQVTHFKCGGVAIGVGM 85
Score = 33.6 bits (67), Expect(5) = 1e-042
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3 / -1
Query: 1137 HAFAEKKKTPLEVGHLEHEQ 1196
HA A+ T EVGHLEHEQ
Sbjct: 85 HANADSHATAFEVGHLEHEQ 26
>gb|CX617349.1|CX617349 GABR1_33_E12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_33_E12_A002 3', mRNA sequence
Length = 790
Score = 247 bits (534), Expect(2) = 6e-067
Identities = 104/128 (81%), Positives = 108/128 (84%)
Frame = -1 / +2
Query: 657 PLXXXXXXXXXXXXXXXVIQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLG 478
PL VIQ ALDRMD+ YCRSALDYLELQPDLSALVRGAHTFRCPNLG
Sbjct: 44 PLAEAGKVTSGLAEGAAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLG 223
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFR 298
LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSAN DGSLS+AISLQAEHMEKFR
Sbjct: 224 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFR 403
Query: 297 KLIYDF*S 274
KLI + *+
Sbjct: 404 KLICEV*T 427
Score = 176 bits (378), Expect = 9e-043
Identities = 78/127 (61%), Positives = 85/127 (66%)
Frame = +2 / -2
Query: 290 MSFRNFSMCSACSEMATDRLPSRLALGSTXXXXXXXXXXXXXXTGRPHPKSASWMGRRTQ 469
+SFRNFSMCSAC E+A DRLPS ALG T TGRPHPKSASW+GRRTQ
Sbjct: 411 ISFRNFSMCSACKEIAMDRLPSPFALGRTNARPSYAIPPGPMNTGRPHPKSASWIGRRTQ 232
Query: 470 LVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRSNAAWITDXXXXXXXXXXXXX 649
LVSPR GHR VCAPRTSAD+SGCSSR*SSA+RQ SI S+A W+T
Sbjct: 231 LVSPRFGHRKVCAPRTSADKSGCSSR*SSAERQ*SLSILSSAPWMTAAPSASPLVTLPAS 52
Query: 650 XXGVAVK 670
GVAVK
Sbjct: 51 ASGVAVK 31
Score = 90.0 bits (190), Expect(2) = 6e-022
Identities = 36/75 (48%), Positives = 40/75 (53%)
Frame = -2 / +3
Query: 626 GWQRARP*SRPRWTGWTTGTAGQRWTTWSCSRTCRRWSAGRTRSGAPTWGSPAGCAXXXX 447
GWQ+ + SR W GWTT TA QRWTTWSC+R C+ W SGA T GSPAG A
Sbjct: 75 GWQKEQQSSREHWIGWTTTTAAQRWTTWSCNRICQHWCVEHIPSGART*GSPAGYAFLSM 254
Query: 446 XXXXXXXXXXSWAPA 402
SW A
Sbjct: 255 MPTSDGAVLCSWGQA 299
Score = 36.3 bits (73), Expect(2) = 6e-022
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -3 / +1
Query: 334 HLAAGGAHGEVPEAHLRLLISNSSPQV 254
+L AG AHGEVPEA+LR L S+P +
Sbjct: 367 YLFAG*AHGEVPEANLRSLNRMSAPTI 447
Score = 29.5 bits (58), Expect(2) = 6e-067
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / +2
Query: 700 LPEGYFGNVIF 668
LP+GYFGNVIF
Sbjct: 2 LPDGYFGNVIF 34
>gb|BG102865.1|BG102865 RHIZ2_34_D03.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 450
Score = 149 bits (321), Expect(2) = 3e-039
Identities = 60/77 (77%), Positives = 62/77 (80%)
Frame = -3 / +2
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAMLS 956
QHHVA GFSGLHFINSWADLCRGVPIA MPFIDRSLLRARDPPTP YPH+EYQPAPAMLS
Sbjct: 86 QHHVADGFSGLHFINSWADLCRGVPIAVMPFIDRSLLRARDPPTPVYPHVEYQPAPAMLS 265
Query: 955 EPPQAALTSKPATPPTA 905
P A + P A
Sbjct: 266 SEPPQAALTAKPATPPA 316
Score = 135 bits (289), Expect(4) = 1e-066
Identities = 54/65 (83%), Positives = 55/65 (84%)
Frame = +3 / -1
Query: 939 AACGGSDSMAGAGWYSMCG*PGVGGSRARRSDRSMKGMPAIGTPRQRSAHELMKCSPEKP 1118
A G DSMAGAGWYS CG* GVGGSRARR +RSMKGM AIGTPRQRSAHELMKC PEKP
Sbjct: 282 ACGGSEDSMAGAGWYSTCG*TGVGGSRARRRERSMKGMTAIGTPRQRSAHELMKCRPEKP 103
Query: 1119 PATWC 1133
ATWC
Sbjct: 102 SATWC 88
Score = 127 bits (273), Expect(4) = 2e-065
Identities = 53/65 (81%), Positives = 55/65 (84%)
Frame = -2 / +1
Query: 1133 APRGRRLLRTALHQLVGGPLPRRPDRRHALH*PVAPPRARSADPGLPAHRVPAGARHAI* 954
APR RRLLR ALHQLVGGPLPRRPDRRHALH*P+ PPRA ADPGLPA RVPAGARHA+
Sbjct: 88 APRSRRLLRPALHQLVGGPLPRRPDRRHALH*PLPPPRA*PADPGLPARRVPAGARHAVL 267
Query: 953 AATGG 939
A G
Sbjct: 268 RAAAG 282
Score = 84.9 bits (179), Expect(4) = 2e-065
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = -3 / +2
Query: 958 SEPPQAALTSKPATPPTAVAIFKLSRAELVRLRSQVPARE 839
SEPPQAALT+KPATPP AVAIFKLSRAEL RLRSQVPARE
Sbjct: 266 SEPPQAALTAKPATPPAAVAIFKLSRAELGRLRSQVPARE 385
Score = 80.3 bits (169), Expect(4) = 1e-066
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = +3 / -1
Query: 840 SRAGTCERRRTSSARESLKIATAVGGVAGLDVRAACGGSD 959
SRAGTCERRR SSARESLK+ATA GGVAG VRAACGGS+
Sbjct: 384 SRAGTCERRRPSSARESLKMATAAGGVAGFAVRAACGGSE 265
Score = 70.7 bits (148), Expect(5) = 2e-041
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +2 / -3
Query: 1037 VNEGHAGDRDAAAEVRPRVDEVQSGEAAGHVVL 1135
VNEGH GDRDAAAEVRPRVDEVQ+GEA G+VVL
Sbjct: 184 VNEGHDGDRDAAAEVRPRVDEVQAGEAVGYVVL 86
Score = 55.6 bits (115), Expect(4) = 2e-065
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / +2
Query: 844 REGAPRFSTYAVLAAHVWRCA 782
REGAPRFSTYAVLAAHVWRCA
Sbjct: 386 REGAPRFSTYAVLAAHVWRCA 448
Score = 54.7 bits (113), Expect(4) = 1e-066
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +3 / -1
Query: 783 AHRHTCAASTAYVLNRGAPSRA 848
AHRHTCAASTAYVLNRGAPSR+
Sbjct: 447 AHRHTCAASTAYVLNRGAPSRS 382
Score = 50.6 bits (104), Expect(5) = 2e-041
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +2 / -3
Query: 782 RAPPHVRRQHSVRAEPRRALA 844
RAPPHVRRQH VRAEPRRALA
Sbjct: 448 RAPPHVRRQHRVRAEPRRALA 386
Score = 47.3 bits (97), Expect(5) = 2e-041
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +2 / -3
Query: 836 ALARGDLRTEADELGAGELEDSH 904
ALARGDLRT+A +LGAGELED H
Sbjct: 388 ALARGDLRTQAAQLGAGELEDGH 320
Score = 42.8 bits (87), Expect(4) = 1e-066
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +1 / -1
Query: 1162 PHLKWVTWSTSSGKEEMSS 1218
PHLKWVTWSTSSGK SS
Sbjct: 60 PHLKWVTWSTSSGKAVSSS 4
Score = 42.8 bits (87), Expect(5) = 2e-041
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +1 / -2
Query: 940 PPVAAQIAWRAPAGTRCAGSPGSA 1011
P A + AWRAPAGTR AG PGSA
Sbjct: 281 PAAARRTAWRAPAGTRRAGRPGSA 210
Score = 40.5 bits (82), Expect(4) = 2e-065
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = -2 / +2
Query: 1217 DDISSFPLLVLQVTHFKWGFFFFGEGM 1137
+D ++FPLLVLQVTHFK G G GM
Sbjct: 5 EDDTAFPLLVLQVTHFKCGGVAIGVGM 85
Score = 34.5 bits (69), Expect(2) = 3e-039
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2 / +1
Query: 827 VQHVRCAGGARVAVRV 780
VQHVR AGGARVAVRV
Sbjct: 403 VQHVRGAGGARVAVRV 450
Score = 33.6 bits (67), Expect(5) = 2e-041
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3 / -3
Query: 1137 HAFAEKKKTPLEVGHLEHEQ 1196
HA A+ T EVGHLEHEQ
Sbjct: 85 HANADSHATAFEVGHLEHEQ 26
>gb|AW285351.1|AW285351 LG1_244_C06.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 538
Score = 198 bits (426), Expect(3) = 1e-065
Identities = 81/95 (85%), Positives = 85/95 (89%)
Frame = -1 / +1
Query: 507 AHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAIS 328
AHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAIS
Sbjct: 1 AHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAIS 180
Query: 327 LQAEHMEKFRKLIYDF*SPTPPHKSSVPVRATQRS 223
LQAEHMEKFRKLIYDF*SP+ + + + RS
Sbjct: 181 LQAEHMEKFRKLIYDF*SPSSSQEVVSTIPTSTRS 285
Score = 155 bits (332), Expect(3) = 3e-051
Identities = 65/82 (79%), Positives = 66/82 (80%)
Frame = +2 / -3
Query: 260 WGGVGDQKS*MSFRNFSMCSACSEMATDRLPSRLALGSTXXXXXXXXXXXXXXTGRPHPK 439
W +GDQKS*MSFRNFSMCSACSEMATDRLPSRLALGST TGRPHPK
Sbjct: 248 WEELGDQKS*MSFRNFSMCSACSEMATDRLPSRLALGSTNASPSYAMPPGPMNTGRPHPK 69
Query: 440 SASWMGRRTQLVSPRLGHRNVC 505
SASWMGRRTQLVSPRLGHRNVC
Sbjct: 68 SASWMGRRTQLVSPRLGHRNVC 3
Score = 106 bits (227), Expect(2) = 3e-035
Identities = 50/83 (60%), Positives = 52/83 (62%)
Frame = +1 / -2
Query: 259 VGRSWRSEVVDELPELLHVLRLQRDXXXXXXXXXXXXXXXREPLVGDXXXXXXXXXXXXX 438
+G + RSEVVDELPELLHVLRLQRD REPLV D
Sbjct: 249 LGGARRSEVVDELPELLHVLRLQRDGHGQAAVAVGAGEHEREPLVRDAAGAHEHGPAPPE 70
Query: 439 VRVVDGQAHPAGEPQVGAPERVR 507
VRVVDGQAHPAGEPQVGAPERVR
Sbjct: 69 VRVVDGQAHPAGEPQVGAPERVR 1
Score = 68.0 bits (142), Expect(3) = 1e-065
Identities = 28/38 (73%), Positives = 29/38 (76%)
Frame = -2 / +2
Query: 206 *VAAIFFDFTHSSCTLFRSCLPPLGRAHTFCAELFTSP 93
*VAA FFDFTHSSCTL RSCLPPLGR +TF L P
Sbjct: 365 *VAARFFDFTHSSCTLSRSCLPPLGRVYTFLCRLVYEP 478
Score = 64.8 bits (135), Expect(3) = 3e-051
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = +3 / -1
Query: 117 KGMRPAQRGQAGTEKCAGTMCEIKEYCCNLLPTVS 221
K + PAQRGQA T KCAGTMCEIKE CCNL T S
Sbjct: 454 KSIHPAQRGQARTGKCAGTMCEIKESCCNLRSTPS 350
Score = 64.3 bits (134), Expect(2) = 3e-035
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +1 / -2
Query: 115 QKVCALPKGGRQERKSVQELCVKSKNIAATY 207
+KV LPKGGRQER+SVQELCVKSKN+AATY
Sbjct: 456 KKVYTLPKGGRQERESVQELCVKSKNLAATY 364
Score = 63.8 bits (133), Expect(3) = 3e-022
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +2 / -3
Query: 116 KRYAPCPKGAGRNGKVCRNYV*NQRI 193
K+Y PCPKGAG+NGKVCRNYV*NQRI
Sbjct: 455 KKYTPCPKGAGKNGKVCRNYV*NQRI 378
Score = 62.0 bits (129), Expect(4) = 6e-034
Identities = 28/44 (63%), Positives = 31/44 (70%)
Frame = -3 / +3
Query: 220 ETVGSRLQQYSLISHIVPAHFSVPACPLWAGRIPFVPNYLRAPA 89
E V RLQQ SLISHIVPAHF V ACPLWAG I F + +P+
Sbjct: 351 EGVLRRLQQDSLISHIVPAHFPVLACPLWAGCILFCAVWFTSPS 482
Score = 61.6 bits (128), Expect(4) = 6e-034
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -2 / +2
Query: 506 RTRSGAPTWGSPAGCAXXXXXXXXXXXXXXSWAPAASPTRG 384
RTRSGAPTWGSPAGCA SWAPAAS TRG
Sbjct: 2 RTRSGAPTWGSPAGCACPSTTRTSGGAGPCSWAPAASRTRG 124
Score = 54.2 bits (112), Expect(4) = 6e-034
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = -3 / +3
Query: 334 HLAAGGAHGEVPEAHLRLLISNSSPQ 257
HLAAGGAHGEVPEAHLRLLIS P+
Sbjct: 174 HLAAGGAHGEVPEAHLRLLISELLPR 251
Score = 47.8 bits (98), Expect(3) = 3e-022
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +3 / -1
Query: 261 GEELEIRSRR*ASGTSPCAPPAA 329
G EIRSRR*ASGTSPCAPPAA
Sbjct: 247 GRSSEIRSRR*ASGTSPCAPPAA 179
Score = 37.7 bits (76), Expect(3) = 3e-022
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / -1
Query: 453 WAGAPSW*APGW 488
WAGAPSW*APGW
Sbjct: 55 WAGAPSW*APGW 20
Score = 25.4 bits (49), Expect(3) = 1e-065
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2 / +1
Query: 98 SPCNCMMNEQ 69
+P NCMMNEQ
Sbjct: 475 APANCMMNEQ 504
Score = 24.4 bits (47), Expect(4) = 6e-034
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2 / +3
Query: 254 HQYQYAQHKEARD 216
H QYAQH+EA +
Sbjct: 264 HTNQYAQHREAEE 302
Score = 23.5 bits (45), Expect(3) = 3e-051
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1 / -1
Query: 199 ATYSQRSLASLCCAYWY**LVGRS 270
AT S SL WY* L+GRS
Sbjct: 310 ATASSASLCCAYWLVWY*RLLGRS 239
>gb|CX610190.1|CX610190 ANR1_17_E01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_17_E01_A002 3', mRNA sequence
Length = 726
Score = 246 bits (532), Expect = 5e-064
Identities = 101/110 (91%), Positives = 105/110 (95%)
Frame = -1 / +1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
IQ ALDRMD+ YCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR
Sbjct: 46 IQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 225
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*S 274
PVFMGPGGIAYEGLAFVLPSAN DGSLS+AISLQAEHMEKFRKLI + *+
Sbjct: 226 PVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLICEV*T 375
Score = 170 bits (366), Expect = 4e-041
Identities = 73/106 (68%), Positives = 80/106 (75%)
Frame = +2 / -2
Query: 290 MSFRNFSMCSACSEMATDRLPSRLALGSTXXXXXXXXXXXXXXTGRPHPKSASWMGRRTQ 469
+SFRNFSMCSAC E+A DRLPS ALG T TGRPHPKSASW+GRRTQ
Sbjct: 359 ISFRNFSMCSACKEIAMDRLPSPFALGRTNARPSYAIPPGPMNTGRPHPKSASWIGRRTQ 180
Query: 470 LVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRSNAAWIT 607
LVSPR GHR VCAPRTSAD+SGCSSR*SSA+RQ SI S+A W+T
Sbjct: 179 LVSPRFGHRKVCAPRTSADKSGCSSR*SSAERQ*SLSILSSAPWMT 42
Score = 90.0 bits (190), Expect(2) = 6e-022
Identities = 36/75 (48%), Positives = 40/75 (53%)
Frame = -2 / +2
Query: 626 GWQRARP*SRPRWTGWTTGTAGQRWTTWSCSRTCRRWSAGRTRSGAPTWGSPAGCAXXXX 447
GWQ+ + SR W GWTT TA QRWTTWSC+R C+ W SGA T GSPAG A
Sbjct: 23 GWQKEQQSSREHWIGWTTTTAAQRWTTWSCNRICQHWCVEHIPSGART*GSPAGYAFLSM 202
Query: 446 XXXXXXXXXXSWAPA 402
SW A
Sbjct: 203 MPTSDGAVLCSWGQA 247
Score = 36.3 bits (73), Expect(2) = 6e-022
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -3 / +3
Query: 334 HLAAGGAHGEVPEAHLRLLISNSSPQV 254
+L AG AHGEVPEA+LR L S+P +
Sbjct: 315 YLFAG*AHGEVPEANLRSLNRMSAPTI 395
>gb|AW287611.2|AW287611 LG1_244_C06.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 426
Score = 147 bits (316), Expect(2) = 4e-042
Identities = 59/77 (76%), Positives = 61/77 (79%)
Frame = -3 / +2
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAMLS 956
QHHVA GFSGLHFINSWADLCRGVPIA MPFIDRSLLRARDPP P YPH+EYQPAPAMLS
Sbjct: 50 QHHVADGFSGLHFINSWADLCRGVPIAVMPFIDRSLLRARDPPAPVYPHVEYQPAPAMLS 229
Query: 955 EPPQAALTSKPATPPTA 905
P A + P A
Sbjct: 230 SEPPQAALTAKPATPPA 280
Score = 135 bits (289), Expect(3) = 2e-063
Identities = 54/65 (83%), Positives = 54/65 (83%)
Frame = +3 / -1
Query: 939 AACGGSDSMAGAGWYSMCG*PGVGGSRARRSDRSMKGMPAIGTPRQRSAHELMKCSPEKP 1118
A G DSMAGAGWYS CG* G GGSRARR DRSMKGM AIGTPRQRSAHELMKC PEKP
Sbjct: 246 ACGGSEDSMAGAGWYSTCG*TGAGGSRARRRDRSMKGMTAIGTPRQRSAHELMKCRPEKP 67
Query: 1119 PATWC 1133
ATWC
Sbjct: 66 SATWC 52
Score = 125 bits (267), Expect(3) = 3e-060
Identities = 53/65 (81%), Positives = 54/65 (83%)
Frame = -2 / +1
Query: 1133 APRGRRLLRTALHQLVGGPLPRRPDRRHALH*PVAPPRARSADPGLPAHRVPAGARHAI* 954
APR RRLLR ALHQLVGGPLPRRPDRRHALH*PV PPRA A PGLPA RVPAGARHA+
Sbjct: 52 APRSRRLLRPALHQLVGGPLPRRPDRRHALH*PVPPPRA*PAGPGLPARRVPAGARHAVL 231
Query: 953 AATGG 939
A G
Sbjct: 232 RAATG 246
Score = 84.9 bits (179), Expect(3) = 3e-060
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = -3 / +2
Query: 958 SEPPQAALTSKPATPPTAVAIFKLSRAELVRLRSQVPARE 839
SEPPQAALT+KPATPP AVAIFKLSRAEL RLRSQVPARE
Sbjct: 230 SEPPQAALTAKPATPPAAVAIFKLSRAELGRLRSQVPARE 349
Score = 82.2 bits (173), Expect(3) = 2e-063
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +3 / -1
Query: 840 SRAGTCERRRTSSARESLKIATAVGGVAGLDVRAACGGSD 959
SRAGTCERRR SSARESLK+ATA GGVAGL VRAACGGS+
Sbjct: 348 SRAGTCERRRPSSARESLKMATAAGGVAGLAVRAACGGSE 229
Score = 73.9 bits (155), Expect(4) = 2e-038
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +2 / -3
Query: 1034 PVNEGHAGDRDAAAEVRPRVDEVQSGEAAGHVVL 1135
PVNEGH GDRDAAAEVRPRVDEVQ+GEA G+VVL
Sbjct: 151 PVNEGHDGDRDAAAEVRPRVDEVQAGEAVGYVVL 50
Score = 67.0 bits (140), Expect(3) = 2e-063
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3 / -1
Query: 768 PRARDAHRHTCAASTAYVLNRGAPSRA 848
PRARDAHRHTCAASTAYVLNRGAPSR+
Sbjct: 426 PRARDAHRHTCAASTAYVLNRGAPSRS 346
Score = 63.4 bits (132), Expect(3) = 3e-060
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -3 / +2
Query: 844 REGAPRFSTYAVLAAHVWRCASLAR 770
REGAPRFSTYAVLAAHVWRCASLAR
Sbjct: 350 REGAPRFSTYAVLAAHVWRCASLAR 424
Score = 59.7 bits (124), Expect(4) = 2e-038
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2 / -3
Query: 770 ARQGRAPPHVRRQHSVRAEPRRALA 844
ARQGRAPPHVRRQH VRAEPRRALA
Sbjct: 424 ARQGRAPPHVRRQHRVRAEPRRALA 350
Score = 46.4 bits (95), Expect(2) = 4e-042
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1 / +3
Query: 816 TLCWRRTCGGARPWRA 769
T CWRRTCGGARPWRA
Sbjct: 378 TRCWRRTCGGARPWRA 425
Score = 44.1 bits (90), Expect(4) = 2e-038
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +2 / -3
Query: 836 ALARGDLRTEADELGAGELEDSH 904
ALARGDLRT+A +LGAGELED +
Sbjct: 352 ALARGDLRTQAAQLGAGELEDGN 284
Score = 40.0 bits (81), Expect(4) = 2e-038
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +1 / -2
Query: 940 PPVAAQIAWRAPAGTRCAGSPGSA 1011
P A + AWRAPAGTR AG PG A
Sbjct: 245 PVAARRTAWRAPAGTRRAGRPGPA 174
>gb|CX619836.1|CX619836 GABR1_48_D10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_48_D10_A002 3', mRNA sequence
Length = 736
Score = 243 bits (526), Expect = 4e-063
Identities = 100/110 (90%), Positives = 104/110 (94%)
Frame = -1 / +2
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
IQ ALDRMD+ YCRSALDYLELQPD SALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR
Sbjct: 44 IQGALDRMDNDYCRSALDYLELQPDSSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 223
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*S 274
PVFMGPGGIAYEGLAFVLPSAN DGSLS+AISLQAEHMEKFRKLI + *+
Sbjct: 224 PVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLICEV*T 373
Score = 169 bits (364), Expect = 8e-041
Identities = 73/106 (68%), Positives = 79/106 (74%)
Frame = +2 / -2
Query: 290 MSFRNFSMCSACSEMATDRLPSRLALGSTXXXXXXXXXXXXXXTGRPHPKSASWMGRRTQ 469
+SFRNFSMCSAC E+A DRLPS ALG T TGRPHPKSASW+GRRTQ
Sbjct: 357 ISFRNFSMCSACKEIAMDRLPSPFALGRTNARPSYAIPPGPMNTGRPHPKSASWIGRRTQ 178
Query: 470 LVSPRLGHRNVCAPRTSADRSGCSSR*SSADRQYPSSIRSNAAWIT 607
LVSPR GHR VCAPRTSAD SGCSSR*SSA+RQ SI S+A W+T
Sbjct: 177 LVSPRFGHRKVCAPRTSADESGCSSR*SSAERQ*SLSILSSAPWMT 40
>gb|BG051515.1|BG051515 FM1_57_E01.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 504
Score = 205 bits (443), Expect(4) = 4e-063
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = -1 / +2
Query: 519 LVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLS 340
LVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLS
Sbjct: 2 LVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLS 181
Query: 339 VAISLQAEHMEKFRKLIYDF*SPT 268
VAISLQAEHMEKFRKLIYDF*SP+
Sbjct: 182 VAISLQAEHMEKFRKLIYDF*SPS 253
Score = 166 bits (357), Expect(4) = 4e-054
Identities = 70/87 (80%), Positives = 71/87 (81%)
Frame = +2 / -1
Query: 260 WGGVGDQKS*MSFRNFSMCSACSEMATDRLPSRLALGSTXXXXXXXXXXXXXXTGRPHPK 439
W +GDQKS*MSFRNFSMCSACSEMATDRLPSRLALGST TGRPHPK
Sbjct: 261 WEELGDQKS*MSFRNFSMCSACSEMATDRLPSRLALGSTNASPSYAMPPGPMNTGRPHPK 82
Query: 440 SASWMGRRTQLVSPRLGHRNVCAPRTS 520
SASWMGRRTQLVSPRLGHRNVCAPRTS
Sbjct: 81 SASWMGRRTQLVSPRLGHRNVCAPRTS 1
Score = 122 bits (260), Expect(2) = 2e-034
Identities = 54/86 (62%), Positives = 56/86 (65%)
Frame = +1 / -3
Query: 259 VGRSWRSEVVDELPELLHVLRLQRDXXXXXXXXXXXXXXXREPLVGDXXXXXXXXXXXXX 438
+G +WRSEVVDELPELLHVLRLQRD REPLV D
Sbjct: 262 LGGAWRSEVVDELPELLHVLRLQRDGHGQAAVAVGAGEHEREPLVRDAAGAHEHGAAPPE 83
Query: 439 VRVVDGQAHPAGEPQVGAPERVRPAD 516
VRVVDGQAHPAGEPQVGAPERVRPAD
Sbjct: 82 VRVVDGQAHPAGEPQVGAPERVRPAD 5
Score = 73.5 bits (154), Expect(4) = 1e-031
Identities = 30/45 (66%), Positives = 30/45 (66%)
Frame = -2 / +3
Query: 518 WSAGRTRSGAPTWGSPAGCAXXXXXXXXXXXXXXSWAPAASPTRG 384
WSAGRTRSGAPTWGSPAGCA SWAPAAS TRG
Sbjct: 3 WSAGRTRSGAPTWGSPAGCACPSTTRTSGGAAPCSWAPAASRTRG 137
Score = 54.2 bits (112), Expect(4) = 1e-031
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = -3 / +1
Query: 334 HLAAGGAHGEVPEAHLRLLISNSSPQ 257
HLAAGGAHGEVPEAHLRLLIS P+
Sbjct: 187 HLAAGGAHGEVPEAHLRLLISKLLPR 264
Score = 46.4 bits (95), Expect(2) = 2e-034
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1 / -1
Query: 115 QKVCALPKGGRQERKSVQELCVKSKNIAATY 207
+K PKG + +SVQELCVKSKN+AATY
Sbjct: 468 KKYTPCPKGAGKNGESVQELCVKSKNLAATY 376
Score = 45.5 bits (93), Expect(4) = 4e-054
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +3 / -3
Query: 141 GQAGTEKCAGTMCEIKEYCCNLLPTVS 221
G+ KCAGTMCEIKE CCNL T S
Sbjct: 442 GRQERGKCAGTMCEIKESCCNLRSTPS 362
Score = 38.2 bits (77), Expect(4) = 1e-031
Identities = 18/30 (60%), Positives = 19/30 (63%)
Frame = -2 / +2
Query: 206 *VAAIFFDFTHSSCTLFRSCLPPLGRAHTF 117
*VAA FFDFTHSSCTL P G+ F
Sbjct: 377 *VAARFFDFTHSSCTLSPFLPAPFGQGVYF 466
Score = 37.7 bits (76), Expect(4) = 4e-063
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = -3 / +3
Query: 220 ETVGSRLQQYSLISHIVPAHFSVPACP 140
E V RLQQ SLISHIVPAHF P
Sbjct: 363 EGVLRRLQQDSLISHIVPAHFPRSCLP 443
Score = 36.3 bits (73), Expect(4) = 4e-054
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2 / -1
Query: 116 KRYAPCPKGAGRNGK 160
K+Y PCPKGAG+NG+
Sbjct: 468 KKYTPCPKGAGKNGE 424
Score = 34.5 bits (69), Expect(4) = 4e-063
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2 / +3
Query: 155 RSCLPPLGRAHTFCAELFTSP 93
RSCLPPLGR +TF + P
Sbjct: 429 RSCLPPLGRVYTFLCRMVYEP 491
Score = 28.6 bits (56), Expect(4) = 1e-031
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / +1
Query: 119 FCAELFTSPCNCM 81
FCA FTSP NCM
Sbjct: 466 FCAVWFTSPSNCM 504
Score = 23.1 bits (44), Expect(4) = 4e-063
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2 / +1
Query: 272 QLLPTSHQYQYAQHKEAR 219
+LLP SHQY Q+ + +
Sbjct: 250 KLLPRSHQYHTNQYAQKK 303
Score = 22.6 bits (43), Expect(4) = 4e-054
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1 / -2
Query: 85 QLQGLVNNSAQK 120
QL GLVN++AQK
Sbjct: 500 QLLGLVNHTAQK 465
>gb|BG102542.1|BG102542 RHIZ2_34_D03.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 493
Score = 202 bits (435), Expect(5) = 2e-061
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = -1 / +3
Query: 513 RGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVA 334
RGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVA
Sbjct: 3 RGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVA 182
Query: 333 ISLQAEHMEKFRKLIYDF*SPT 268
ISLQAEHMEKFRKLIYDF*SP+
Sbjct: 183 ISLQAEHMEKFRKLIYDF*SPS 248
Score = 162 bits (348), Expect(3) = 1e-048
Identities = 68/85 (80%), Positives = 69/85 (81%)
Frame = +2 / -1
Query: 260 WGGVGDQKS*MSFRNFSMCSACSEMATDRLPSRLALGSTXXXXXXXXXXXXXXTGRPHPK 439
W +GDQKS*MSFRNFSMCSACSEMATDRLPSRLALGST TGRPHPK
Sbjct: 256 WEELGDQKS*MSFRNFSMCSACSEMATDRLPSRLALGSTNASPSYAMPPGPMNTGRPHPK 77
Query: 440 SASWMGRRTQLVSPRLGHRNVCAPR 514
SASWMGRRTQLVSPRLGHRNVCAPR
Sbjct: 76 SASWMGRRTQLVSPRLGHRNVCAPR 2
Score = 119 bits (254), Expect(2) = 1e-033
Identities = 53/85 (62%), Positives = 55/85 (64%)
Frame = +1 / -3
Query: 259 VGRSWRSEVVDELPELLHVLRLQRDXXXXXXXXXXXXXXXREPLVGDXXXXXXXXXXXXX 438
+G +WRSEVVDELPELLHVLRLQRD REPLV D
Sbjct: 257 LGGAWRSEVVDELPELLHVLRLQRDGHGQAAVAVGAGEHEREPLVRDAAGAHEHGAAPPE 78
Query: 439 VRVVDGQAHPAGEPQVGAPERVRPA 513
VRVVDGQAHPAGEPQVGAPERVRPA
Sbjct: 77 VRVVDGQAHPAGEPQVGAPERVRPA 3
Score = 68.4 bits (143), Expect(3) = 9e-027
Identities = 29/44 (65%), Positives = 29/44 (65%)
Frame = -2 / +1
Query: 515 SAGRTRSGAPTWGSPAGCAXXXXXXXXXXXXXXSWAPAASPTRG 384
SAGRTRSGAPTWGSPAGCA SWAPAAS TRG
Sbjct: 1 SAGRTRSGAPTWGSPAGCACPSTTRTSGGAAPCSWAPAASRTRG 132
Score = 54.2 bits (112), Expect(3) = 9e-027
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = -3 / +2
Query: 334 HLAAGGAHGEVPEAHLRLLISNSSPQ 257
HLAAGGAHGEVPEAHLRLLIS P+
Sbjct: 182 HLAAGGAHGEVPEAHLRLLISKLLPR 259
Score = 46.4 bits (95), Expect(2) = 1e-033
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1 / -1
Query: 103 NNSAQKVCALPKGGRQERKSVQELCVKSKNIAATY 207
+ + + + + PKG + +SVQELCVKSKN+AATY
Sbjct: 475 HTAQKSIHSCPKGAGKNGESVQELCVKSKNLAATY 371
Score = 45.5 bits (93), Expect(3) = 1e-048
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +3 / -3
Query: 141 GQAGTEKCAGTMCEIKEYCCNLLPTVS 221
G+ KCAGTMCEIKE CCNL T S
Sbjct: 437 GRQERGKCAGTMCEIKESCCNLRSTPS 357
Score = 37.7 bits (76), Expect(3) = 9e-027
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -2 / +3
Query: 206 *VAAIFFDFTHSSCTLFRSCLPPLGR 129
*VAA FFDFTHSSCTL P G+
Sbjct: 372 *VAARFFDFTHSSCTLSPFLPAPFGQ 449
Score = 37.7 bits (76), Expect(5) = 2e-061
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 220 ETVGSRLQQYSLISHIVPAHFSVPACP 140
E V RLQQ SLISHIVPAHF P
Sbjct: 358 EGVLRRLQQDSLISHIVPAHFPRSCLP 438
Score = 27.2 bits (53), Expect(5) = 2e-061
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2 / +1
Query: 155 RSCLPPLGRAHTF 117
RSCLPPLGR+ F
Sbjct: 424 RSCLPPLGRSVYF 462
Score = 26.3 bits (51), Expect(3) = 1e-048
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1 / -3
Query: 115 QKVCALPKGGRQER 156
+K LPKGGRQER
Sbjct: 464 KKYTLLPKGGRQER 423
Score = 23.1 bits (44), Expect(5) = 2e-061
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1 / +2
Query: 117 LCRIIYEPLQ 88
LCR++YEP Q
Sbjct: 464 LCRMVYEPQQ 493
Score = 23.1 bits (44), Expect(5) = 2e-061
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2 / +2
Query: 272 QLLPTSHQYQYAQHKEAR 219
+LLP SHQY Q+ + +
Sbjct: 245 KLLPRSHQYHTNQYAQKK 298
>gb|BE355598.1|BE355598 DG1_115_H07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 464
Score = 200 bits (431), Expect(2) = 2e-059
Identities = 82/100 (82%), Positives = 88/100 (88%)
Frame = -1 / +1
Query: 522 ALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSL 343
ALVRGAHTFRCPN+GLTSWVR+PIHD DFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSL
Sbjct: 1 ALVRGAHTFRCPNMGLTSWVRVPIHDTDFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSL 180
Query: 342 SVAISLQAEHMEKFRKLIYDF*SPTPPHKSSVPVRATQRS 223
SVAISLQAEHM KFRKLIYDF*SP+ + + + RS
Sbjct: 181 SVAISLQAEHM*KFRKLIYDF*SPSSSQEVVSTIPTSTRS 300
Score = 156 bits (335), Expect(3) = 2e-050
Identities = 66/87 (75%), Positives = 67/87 (77%)
Frame = +2 / -1
Query: 260 WGGVGDQKS*MSFRNFSMCSACSEMATDRLPSRLALGSTXXXXXXXXXXXXXXTGRPHPK 439
W +GDQKS*MSFRNF MCSACSEMATDRLPSRLALGST TGRPHPK
Sbjct: 263 WEELGDQKS*MSFRNFYMCSACSEMATDRLPSRLALGSTNASPSYAMPPGPMNTGRPHPK 84
Query: 440 SASWMGRRTQLVSPRLGHRNVCAPRTS 520
S SWMG RTQLVSP LGHRNVCAPRTS
Sbjct: 83 SVSWMGTRTQLVSPMLGHRNVCAPRTS 3
Score = 108 bits (231), Expect(2) = 1e-032
Identities = 51/86 (59%), Positives = 53/86 (61%)
Frame = +1 / -3
Query: 259 VGRSWRSEVVDELPELLHVLRLQRDXXXXXXXXXXXXXXXREPLVGDXXXXXXXXXXXXX 438
+G + RSEVVDELPELLHVLRLQRD REPLV D
Sbjct: 264 LGGARRSEVVDELPELLHVLRLQRDGH*QAAVAVGAGEHEREPLVRDAAGAHEHGPAPPE 85
Query: 439 VRVVDGQAHPAGEPQVGAPERVRPAD 516
VRVVDG AHPAGEP VGAPERVRPAD
Sbjct: 84 VRVVDGHAHPAGEPHVGAPERVRPAD 7
Score = 75.3 bits (158), Expect(4) = 7e-033
Identities = 31/46 (67%), Positives = 31/46 (67%)
Frame = -2 / +2
Query: 521 RWSAGRTRSGAPTWGSPAGCAXXXXXXXXXXXXXXSWAPAASPTRG 384
RWSAGRTRSGAPTWGSPAGCA SWAPAAS TRG
Sbjct: 2 RWSAGRTRSGAPTWGSPAGCACPSTTRTSGGAGPCSWAPAASRTRG 139
Score = 57.4 bits (119), Expect(3) = 2e-050
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = +3 / -2
Query: 129 PAQRGQAGTEKCAGTMCEIKEYCCNLLPTVS 221
P RGQA T KCAGTMCEIKE CCNL T S
Sbjct: 457 PCPRGQARTGKCAGTMCEIKESCCNLRSTPS 365
Score = 53.8 bits (111), Expect(2) = 1e-032
Identities = 21/24 (87%), Positives = 24/24 (100%)
Frame = +1 / -3
Query: 136 KGGRQERKSVQELCVKSKNIAATY 207
+GGRQER+SVQELCVKSKN+AATY
Sbjct: 450 QGGRQERESVQELCVKSKNLAATY 379
Score = 51.9 bits (107), Expect(2) = 2e-059
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -2 / +2
Query: 206 *VAAIFFDFTHSSCTLFRSCLPP 138
*VAA FFDFTHSSCTL RSCLPP
Sbjct: 380 *VAARFFDFTHSSCTLSRSCLPP 448
Score = 50.1 bits (103), Expect(4) = 7e-033
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -3 / +3
Query: 334 HLAAGGAHGEVPEAHLRLLISNSSPQ 257
HLAAGGAH EVPEAHLRLLIS P+
Sbjct: 189 HLAAGGAHVEVPEAHLRLLISELLPR 266
Score = 49.6 bits (102), Expect(4) = 7e-033
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / +3
Query: 220 ETVGSRLQQYSLISHIVPAHFSVPACPLWAG 128
E V RLQQ SLISHIVPAHF V ACPL G
Sbjct: 366 EGVLRRLQQDSLISHIVPAHFPVLACPLGQG 458
Score = 26.7 bits (52), Expect(3) = 2e-050
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / -2
Query: 223 ASLCCAYW 246
ASLCCAYW
Sbjct: 310 ASLCCAYW 287
Score = 23.5 bits (45), Expect(4) = 7e-033
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2 / +3
Query: 254 HQYQYAQHKEA 222
H QYAQH+EA
Sbjct: 279 HTNQYAQHREA 311
>gb|CN130798.1|CN130798 RHOH1_43_H02.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_43_H02_A002 5', mRNA sequence
Length = 834
Score = 98.7 bits (209), Expect(3) = 3e-057
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = -1 / +2
Query: 453 IHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAI 331
+HDADFGWGRPVFMGPGGIAYEGLAFVLPSAN DGSLS+AI
Sbjct: 710 LHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAI 832
Score = 96.8 bits (205), Expect(3) = 3e-057
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = -3 / +1
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTP 1001
QHHVA G SGLHFINSW+DLCRG I+ MPFIDR+L+RARDPPTP
Sbjct: 580 QHHVADGMSGLHFINSWSDLCRGAQISVMPFIDRTLIRARDPPTP 714
Score = 78.0 bits (164), Expect(3) = 5e-029
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = +3 / -2
Query: 1002 GVGGSRARRSDRSMKGMPAIGTPRQRSAHELMKCSPEKPPATWC 1133
GVGGSRAR RSMKGM I PRQRS HELMKC P+ P ATWC
Sbjct: 713 GVGGSRARIRVRSMKGMTEI*APRQRSDHELMKCKPDMPSATWC 582
Score = 73.5 bits (154), Expect(3) = 3e-057
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -2 / +1
Query: 1262 PPGDLERLIPTVDFTDDISSFPLLVLQVTHFKWGFFFFGEGM 1137
P DL+RLIPTVD+TDDIS+FPLLVLQVTHFK G G GM
Sbjct: 454 PTMDLKRLIPTVDYTDDISAFPLLVLQVTHFKCGGISLGVGM 579
Score = 49.6 bits (102), Expect(3) = 5e-029
Identities = 22/41 (53%), Positives = 23/41 (56%)
Frame = +2 / -1
Query: 329 EMATDRLPSRLALGSTXXXXXXXXXXXXXXTGRPHPKSASW 451
E+A DRLPS ALG T TGRPHPKSASW
Sbjct: 834 EIAMDRLPSPFALGRTNARPSYAIPPGPMNTGRPHPKSASW 712
Score = 46.0 bits (94), Expect(3) = 5e-029
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1 / -2
Query: 1150 KKKKPHLKWVTWSTSSGKEEMSSVKSTV 1233
++ PHLK VTWSTS GK EMSSV STV
Sbjct: 566 REMPPHLK*VTWSTSRGKAEMSSV*STV 483
>gb|CN130722.1|CN130722 RHOH1_43_H02.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_43_H02_A002 3', mRNA sequence
Length = 737
Score = 130 bits (279), Expect(3) = 2e-055
Identities = 53/60 (88%), Positives = 57/60 (95%)
Frame = -1 / +2
Query: 453 IHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*S 274
+HDADFGWGRPVFMGPGGIAYEGLAFVLPSAN DGSLS+AISLQAEHMEKFRKLI + *+
Sbjct: 200 LHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLICEV*T 379
Score = 93.6 bits (198), Expect(3) = 2e-055
Identities = 35/45 (77%), Positives = 39/45 (86%)
Frame = -3 / +1
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTP 1001
QHHVA G SGLHFINSW+DLCRG I+ MPFIDR+L+RA DPPTP
Sbjct: 70 QHHVADGMSGLHFINSWSDLCRGAQISVMPFIDRTLIRAGDPPTP 204
Score = 78.5 bits (165), Expect(3) = 1e-032
Identities = 33/54 (61%), Positives = 35/54 (64%)
Frame = +2 / -3
Query: 290 MSFRNFSMCSACSEMATDRLPSRLALGSTXXXXXXXXXXXXXXTGRPHPKSASW 451
+SFRNFSMCSAC E+A DRLPS ALG T TGRPHPKSASW
Sbjct: 363 ISFRNFSMCSACKEIAMDRLPSPFALGRTNARPSYAIPPGPMNTGRPHPKSASW 202
Score = 74.8 bits (157), Expect(3) = 1e-032
Identities = 31/44 (70%), Positives = 32/44 (72%)
Frame = +3 / -1
Query: 1002 GVGGSRARRSDRSMKGMPAIGTPRQRSAHELMKCSPEKPPATWC 1133
GVGGS AR RSMKGM I PRQRS HELMKC P+ P ATWC
Sbjct: 203 GVGGSPARIRVRSMKGMTEI*APRQRSDHELMKCKPDMPSATWC 72
Score = 38.2 bits (77), Expect(3) = 2e-055
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -2 / +1
Query: 1205 SFPLLVLQVTHFKWGFFFFGEGM 1137
+FPLLVLQVTHFK G G GM
Sbjct: 1 AFPLLVLQVTHFKCGGISLGVGM 69
Score = 32.2 bits (64), Expect(3) = 1e-032
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1 / -1
Query: 1150 KKKKPHLKWVTWSTSSGK 1203
++ PHLK VTWSTS GK
Sbjct: 56 REMPPHLK*VTWSTSRGK 3
>gb|CD231568.1|CD231568 SS1_22_H03.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_22_H03_A012 3', mRNA sequence
Length = 634
Score = 213 bits (460), Expect = 5e-054
Identities = 87/93 (93%), Positives = 90/93 (96%)
Frame = -1 / +2
Query: 552 DYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFV 373
DYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFV
Sbjct: 2 DYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFV 181
Query: 372 LPSANRDGSLSVAISLQAEHMEKFRKLIYDF*S 274
LPSAN DGSLS+AISLQAEHMEKFRKLI + *+
Sbjct: 182 LPSANGDGSLSIAISLQAEHMEKFRKLICEV*T 280
Score = 150 bits (322), Expect = 5e-035
Identities = 63/88 (71%), Positives = 67/88 (76%)
Frame = +2 / -2
Query: 290 MSFRNFSMCSACSEMATDRLPSRLALGSTXXXXXXXXXXXXXXTGRPHPKSASWMGRRTQ 469
+SFRNFSMCSAC E+A DRLPS ALG T TGRPHPKSASW+GRRTQ
Sbjct: 264 ISFRNFSMCSACKEIAMDRLPSPFALGRTNARPSYAIPPGPMNTGRPHPKSASWIGRRTQ 85
Query: 470 LVSPRLGHRNVCAPRTSADRSGCSSR*S 553
LVSPR GHR VCAPRTSAD+SGCSSR*S
Sbjct: 84 LVSPRFGHRKVCAPRTSADKSGCSSR*S 1
>gb|BE355906.1|BE355906 DG1_11_D11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 254
Score = 206 bits (445), Expect = 5e-052
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = -1 / +3
Query: 540 LQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSA 361
LQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSA
Sbjct: 3 LQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSA 182
Query: 360 NRDGSLSVAISLQAEHMEKFRKLI 289
NRDGSLSVAISLQAEHMEKFRKLI
Sbjct: 183 NRDGSLSVAISLQAEHMEKFRKLI 254
Score = 166 bits (356), Expect = 1e-039
Identities = 69/83 (83%), Positives = 69/83 (83%)
Frame = +2 / -2
Query: 290 MSFRNFSMCSACSEMATDRLPSRLALGSTXXXXXXXXXXXXXXTGRPHPKSASWMGRRTQ 469
MSFRNFSMCSACSEMATDRLPSRLALGST TGRPHPKSASWMGRRTQ
Sbjct: 253 MSFRNFSMCSACSEMATDRLPSRLALGSTNASPSYAMPPGPMNTGRPHPKSASWMGRRTQ 74
Query: 470 LVSPRLGHRNVCAPRTSADRSGC 538
LVSPRLGHRNVCAPRTSADRSGC
Sbjct: 73 LVSPRLGHRNVCAPRTSADRSGC 5
Score = 92.3 bits (195), Expect(2) = 6e-024
Identities = 37/52 (71%), Positives = 37/52 (71%)
Frame = -2 / +1
Query: 539 CSRTCRRWSAGRTRSGAPTWGSPAGCAXXXXXXXXXXXXXXSWAPAASPTRG 384
CSRTCRRWSAGRTRSGAPTWGSPAGCA SWAPAAS TRG
Sbjct: 4 CSRTCRRWSAGRTRSGAPTWGSPAGCACPSTTRTSGGAGPCSWAPAASRTRG 159
Score = 40.9 bits (83), Expect(2) = 6e-024
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3 / +2
Query: 334 HLAAGGAHGEVPEAH 290
HLAAGGAHGEVPEAH
Sbjct: 209 HLAAGGAHGEVPEAH 253
>gb|CN133162.1|CN133162 OX1_10_B10.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_10_B10_A002 5', mRNA sequence
Length = 746
Score = 126 bits (269), Expect(3) = 5e-048
Identities = 48/64 (75%), Positives = 54/64 (84%)
Frame = -3 / +3
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAMLS 956
QHHVA G SGLHFINSW+DLCRG I+ MPFIDR+L+RARDPPTP + HIEYQPAPA+ S
Sbjct: 477 QHHVADGMSGLHFINSWSDLCRGAQISVMPFIDRTLIRARDPPTPSFHHIEYQPAPAI*S 656
Query: 955 EPPQ 944
PQ
Sbjct: 657 STPQ 668
Score = 95.5 bits (202), Expect(3) = 2e-028
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = +3 / -2
Query: 948 GGSDSMAGAGWYSMCG*PGVGGSRARRSDRSMKGMPAIGTPRQRSAHELMKCSPEKPPAT 1127
G D +AGAGWYS+ GVGGSRAR RSMKGM I PRQRS HELMKC P+ P AT
Sbjct: 664 GVEDYIAGAGWYSI**KDGVGGSRARIRVRSMKGMTEI*APRQRSDHELMKCKPDMPSAT 485
Query: 1128 WC 1133
WC
Sbjct: 484 WC 479
Score = 73.5 bits (154), Expect(3) = 5e-048
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -2 / +3
Query: 1262 PPGDLERLIPTVDFTDDISSFPLLVLQVTHFKWGFFFFGEGM 1137
P DL+RLIPTVD+TDDIS+FPLLVLQVTHFK G G GM
Sbjct: 351 PTMDLKRLIPTVDYTDDISAFPLLVLQVTHFKCGGISLGVGM 476
Score = 46.0 bits (94), Expect(3) = 2e-028
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1 / -2
Query: 1150 KKKKPHLKWVTWSTSSGKEEMSSVKSTV 1233
++ PHLK VTWSTS GK EMSSV STV
Sbjct: 463 REMPPHLK*VTWSTSRGKAEMSSV*STV 380
Score = 32.7 bits (65), Expect(3) = 5e-048
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -3 / +3
Query: 937 LTSKPATPPTAVAIFKLSRAELVRL 863
L SK P TAV IFKL+R++L RL
Sbjct: 672 LASKSKPPATAVDIFKLTRSDLGRL 746
Score = 24.9 bits (48), Expect(3) = 2e-028
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3 / -2
Query: 867 RTSSARESLKIATAVGGVAGLDVR 938
R S R SLK++TAV G L+ R
Sbjct: 742 RPRSERVSLKMSTAVAGGFDLEAR 671
>gb|CX617434.1|CX617434 GABR1_33_E12.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_33_E12_A002 5', mRNA sequence
Length = 817
Score = 129 bits (277), Expect(3) = 2e-046
Identities = 49/64 (76%), Positives = 55/64 (85%)
Frame = -3 / +1
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAMLS 956
QHHVA G SGLHFINSW+DLCRG I+ MPFIDR+L+RARDPPTP + HIEYQPAPA+LS
Sbjct: 571 QHHVADGMSGLHFINSWSDLCRGAQISVMPFIDRTLIRARDPPTPSFHHIEYQPAPAILS 750
Query: 955 EPPQ 944
PQ
Sbjct: 751 STPQ 762
Score = 96.8 bits (205), Expect(2) = 8e-027
Identities = 41/62 (66%), Positives = 45/62 (72%)
Frame = +3 / -3
Query: 948 GGSDSMAGAGWYSMCG*PGVGGSRARRSDRSMKGMPAIGTPRQRSAHELMKCSPEKPPAT 1127
G D++AGAGWYS+ GVGGSRAR RSMKGM I PRQRS HELMKC P+ P AT
Sbjct: 758 GVEDNIAGAGWYSI**KDGVGGSRARIRVRSMKGMTEI*APRQRSDHELMKCKPDMPSAT 579
Query: 1128 WC 1133
WC
Sbjct: 578 WC 573
Score = 73.5 bits (154), Expect(3) = 2e-046
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -2 / +1
Query: 1262 PPGDLERLIPTVDFTDDISSFPLLVLQVTHFKWGFFFFGEGM 1137
P DL+RLIPTVD+TDDIS+FPLLVLQVTHFK G G GM
Sbjct: 445 PTMDLKRLIPTVDYTDDISAFPLLVLQVTHFKCGGISLGVGM 570
Score = 46.0 bits (94), Expect(2) = 8e-027
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1 / -3
Query: 1150 KKKKPHLKWVTWSTSSGKEEMSSVKSTV 1233
++ PHLK VTWSTS GK EMSSV STV
Sbjct: 557 REMPPHLK*VTWSTSRGKAEMSSV*STV 474
Score = 24.0 bits (46), Expect(3) = 2e-046
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3 / +1
Query: 937 LTSKPATPPTAVAIFKL 887
L SK P TAV IFKL
Sbjct: 766 LASKSKPPATAVDIFKL 816
>gb|BG051195.1|BG051195 FM1_57_E01.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 466
Score = 140 bits (300), Expect(3) = 5e-042
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = -3 / +3
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAM 962
QHHVA GFSGLHFINSWADLCRGVPIA MPFIDRSLLRARDPPTP YPH+EYQPAPAM
Sbjct: 291 QHHVADGFSGLHFINSWADLCRGVPIAVMPFIDRSLLRARDPPTPVYPHVEYQPAPAM 464
Score = 129 bits (276), Expect(2) = 5e-035
Identities = 51/58 (87%), Positives = 52/58 (89%)
Frame = +3 / -1
Query: 960 SMAGAGWYSMCG*PGVGGSRARRSDRSMKGMPAIGTPRQRSAHELMKCSPEKPPATWC 1133
SMAGAGWYS CG* GVGGSRARR +RSMKGM AIGTPRQRSAHELMKC PEKP ATWC
Sbjct: 466 SMAGAGWYSTCG*TGVGGSRARRRERSMKGMTAIGTPRQRSAHELMKCRPEKPSATWC 293
Score = 120 bits (256), Expect = 6e-026
Identities = 50/58 (86%), Positives = 51/58 (87%)
Frame = -2 / +2
Query: 1133 APRGRRLLRTALHQLVGGPLPRRPDRRHALH*PVAPPRARSADPGLPAHRVPAGARHA 960
APR RRLLR ALHQLVGGPLPRRPDRRHALH*P+ PPRA ADPGLPA VPAGARHA
Sbjct: 293 APRSRRLLRPALHQLVGGPLPRRPDRRHALH*PLPPPRA*PADPGLPAR*VPAGARHA 466
Score = 70.7 bits (148), Expect(3) = 4e-021
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +2 / -3
Query: 1037 VNEGHAGDRDAAAEVRPRVDEVQSGEAAGHVVL 1135
VNEGH GDRDAAAEVRPRVDEVQ+GEA G+VVL
Sbjct: 389 VNEGHDGDRDAAAEVRPRVDEVQAGEAVGYVVL 291
Score = 40.9 bits (83), Expect(2) = 5e-035
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1 / -1
Query: 1162 PHLKWVTWSTSSGK 1203
PHLKWVTWSTSSGK
Sbjct: 265 PHLKWVTWSTSSGK 224
Score = 39.6 bits (80), Expect(3) = 5e-042
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -2 / +3
Query: 1214 DISSFPLLVLQVTHFKWGFFFFGEGM 1137
D ++FPLLVLQVTHFK G G GM
Sbjct: 213 DDTAFPLLVLQVTHFKCGGVAIGVGM 290
Score = 36.8 bits (74), Expect(3) = 4e-021
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1 / -2
Query: 961 AWRAPAGTRCAGSPGSA 1011
AWRAPAGT+ AG PGSA
Sbjct: 465 AWRAPAGTQRAGRPGSA 415
Score = 33.6 bits (67), Expect(3) = 4e-021
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3 / -3
Query: 1137 HAFAEKKKTPLEVGHLEHEQ 1196
HA A+ T EVGHLEHEQ
Sbjct: 290 HANADSHATAFEVGHLEHEQ 231
Score = 32.2 bits (64), Expect(3) = 5e-042
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -2 / +3
Query: 1262 PPGDLERLIPTVDFTDD 1212
P +L+RLIPTVDF+DD
Sbjct: 168 PTMELKRLIPTVDFSDD 218
>gb|CF761981.1|CF761981 DSAF1_86_D08.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_86_D08_A011 5', mRNA sequence
Length = 423
Score = 103 bits (219), Expect(3) = 8e-041
Identities = 46/60 (76%), Positives = 50/60 (83%)
Frame = -1 / +3
Query: 402 GIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPTPPHKSSVPVRATQRS 223
GIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SP+ + + + RS
Sbjct: 3 GIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*SPSSSQEVVSTIPTSTRS 182
Score = 86.8 bits (183), Expect(4) = 2e-039
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +2 / -3
Query: 260 WGGVGDQKS*MSFRNFSMCSACSEMATDRLPSRLALGST 376
W +GDQKS*MSFRNFSMCSACSEMATDRLPSRLALGST
Sbjct: 145 WEELGDQKS*MSFRNFSMCSACSEMATDRLPSRLALGST 29
Score = 68.0 bits (142), Expect(3) = 8e-041
Identities = 28/38 (73%), Positives = 29/38 (76%)
Frame = -2 / +3
Query: 206 *VAAIFFDFTHSSCTLFRSCLPPLGRAHTFCAELFTSP 93
*VAA FFDFTHSSCTL RSCLPPLGR +TF L P
Sbjct: 273 *VAARFFDFTHSSCTLSRSCLPPLGRVYTFLCRLVYEP 386
Score = 64.8 bits (135), Expect(4) = 3e-029
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = +3 / -2
Query: 117 KGMRPAQRGQAGTEKCAGTMCEIKEYCCNLLPTVS 221
K + PAQRGQA T KCAGTMCEIKE CCNL T S
Sbjct: 362 KSIHPAQRGQARTGKCAGTMCEIKESCCNLRSTPS 258
Score = 64.3 bits (134), Expect(4) = 2e-039
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +1 / -3
Query: 115 QKVCALPKGGRQERKSVQELCVKSKNIAATY 207
+KV LPKGGRQER+SVQELCVKSKN+AATY
Sbjct: 364 KKVYTLPKGGRQERESVQELCVKSKNLAATY 272
Score = 62.0 bits (129), Expect(3) = 5e-021
Identities = 28/44 (63%), Positives = 31/44 (70%)
Frame = -3 / +1
Query: 220 ETVGSRLQQYSLISHIVPAHFSVPACPLWAGRIPFVPNYLRAPA 89
E V RLQQ SLISHIVPAHF V ACPLWAG I F + +P+
Sbjct: 259 EGVLRRLQQDSLISHIVPAHFPVLACPLWAGCILFCAVWFTSPS 390
Score = 57.4 bits (119), Expect(4) = 3e-029
Identities = 27/47 (57%), Positives = 29/47 (61%)
Frame = +1 / -2
Query: 259 VGRSWRSEVVDELPELLHVLRLQRDXXXXXXXXXXXXXXXREPLVGD 399
+G + RSEVVDELPELLHVLRLQRD REPLV D
Sbjct: 146 LGGARRSEVVDELPELLHVLRLQRDGHGQAAVAVGAGEHEREPLVRD 6
Score = 54.2 bits (112), Expect(3) = 5e-021
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = -3 / +2
Query: 334 HLAAGGAHGEVPEAHLRLLISNSSPQ 257
HLAAGGAHGEVPEAHLRLLIS P+
Sbjct: 71 HLAAGGAHGEVPEAHLRLLISELLPR 148
Score = 40.9 bits (83), Expect(4) = 2e-039
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +2 / -3
Query: 68 IVHSSYNCRGS*IIRHKRYAPCPKG 142
IVHSSYNC GS* RHK+ PKG
Sbjct: 412 IVHSSYNCWGS*TKRHKKVYTLPKG 338
Score = 40.5 bits (82), Expect(4) = 3e-029
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +3 / -1
Query: 69 LFIHHTIAGARK*FGTKGMRPAQRG 143
LFIHHTIAGARK GTK P +G
Sbjct: 411 LFIHHTIAGARKPNGTKKYTPCPKG 337
Score = 36.8 bits (74), Expect(3) = 8e-041
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -1 / +3
Query: 117 LCRIIYEPLQLYDE*TM 67
LCR++YEP QLYDE*T+
Sbjct: 363 LCRLVYEPQQLYDE*TI 413
Score = 28.6 bits (56), Expect(4) = 2e-039
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1 / -1
Query: 193 IAATYSQRSLASLCCAYW 246
+ A + S ASLCCAYW
Sbjct: 222 LPAPLATASSASLCCAYW 169
Score = 24.4 bits (47), Expect(3) = 5e-021
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2 / +2
Query: 254 HQYQYAQHKEARD 216
H QYAQH+EA +
Sbjct: 161 HTNQYAQHREAEE 199
Score = 23.5 bits (45), Expect(4) = 3e-029
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1 / -1
Query: 199 ATYSQRSLASLCCAYWY**LVGRS 270
AT S SL WY* L+GRS
Sbjct: 207 ATASSASLCCAYWLVWY*RLLGRS 136
>gb|CW264819.1|CW264819 104_733_11231515_116_35255_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11231515, DNA
sequence
Length = 556
Score = 141 bits (303), Expect(2) = 2e-034
Identities = 55/60 (91%), Positives = 56/60 (93%)
Frame = -3 / -2
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAMLS 956
QHHVA GFSGLHFINSWADLCRGVPIA MPFIDRSLLRARDPP P YPH+EYQPAPAMLS
Sbjct: 183 QHHVADGFSGLHFINSWADLCRGVPIAVMPFIDRSLLRARDPPAPVYPHVEYQPAPAMLS 4
Score = 132 bits (282), Expect(2) = 1e-032
Identities = 52/59 (88%), Positives = 52/59 (88%)
Frame = +3 / +2
Query: 957 DSMAGAGWYSMCG*PGVGGSRARRSDRSMKGMPAIGTPRQRSAHELMKCSPEKPPATWC 1133
DSMAGAGWYS CG* G GGSRARR DRSMKGM AIGTPRQRSAHELMKC PEKP ATWC
Sbjct: 5 DSMAGAGWYSTCG*TGAGGSRARRRDRSMKGMTAIGTPRQRSAHELMKCRPEKPSATWC 181
Score = 123 bits (264), Expect = 5e-027
Identities = 51/59 (86%), Positives = 52/59 (88%)
Frame = -2 / -1
Query: 1133 APRGRRLLRTALHQLVGGPLPRRPDRRHALH*PVAPPRARSADPGLPAHRVPAGARHAI 957
APR RRLLR ALHQLVGGPLPRRPDRRHALH*PV PPRA A PGLPA RVPAGARHA+
Sbjct: 181 APRSRRLLRPALHQLVGGPLPRRPDRRHALH*PVPPPRA*PAGPGLPARRVPAGARHAV 5
Score = 29.9 bits (59), Expect(2) = 1e-032
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 1162 PHLKWVTWS 1188
PHLKWVTWS
Sbjct: 209 PHLKWVTWS 235
Score = 26.3 bits (51), Expect(2) = 2e-034
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -2
Query: 1190 VLQVTHFKWGFFFFGEGM 1137
+LQVTHFK G G GM
Sbjct: 237 LLQVTHFKCGGVAIGVGM 184
>gb|CW022568.1|CW022568 104_162_10431922_1_30008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10431922, DNA
sequence
Length = 626
Score = 99.6 bits (211), Expect(2) = 5e-034
Identities = 38/106 (35%), Positives = 64/106 (60%)
Frame = -1 / -3
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I+ A+DR+DD Y RS +DYLE++ + + +L + SW+ +P++DADFGWG
Sbjct: 345 IKDAVDRVDDAYVRSVVDYLEVESEKGSQAARGQLMPESDLWVVSWLGMPMYDADFGWGT 166
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIY 286
P F+ P + G A+V AN+D ++V L+ ++++ F K+ Y
Sbjct: 165 PRFVAPAQMFGSGTAYVTQRANKDDGIAVLFGLEPQYLQCFEKVFY 28
Score = 67.5 bits (141), Expect(2) = 5e-034
Identities = 27/55 (49%), Positives = 33/55 (60%)
Frame = -3 / -3
Query: 835 APRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVI 671
AP STY + AH+WRC +ARGL T+L + R RL+P LP YFGN I
Sbjct: 579 APGVSTYCAVTAHLWRCMCVARGLAPCSDTRLRVPANVRHRLRPALPRSYFGNAI 415
>gb|CD429838.1|CD429838 ETH1_15_D11.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_15_D11_A002 5', mRNA sequence
Length = 718
Score = 99.6 bits (211), Expect(2) = 4e-033
Identities = 38/106 (35%), Positives = 64/106 (60%)
Frame = -1 / -3
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I+ A+DR+DD Y RS +DYLE++ + + +L + SW+ +P++DADFGWG
Sbjct: 428 IKDAVDRVDDAYVRSVVDYLEVESEKGSQAARGQLMPESDLWVVSWLGMPMYDADFGWGT 249
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIY 286
P F+ P + G A+V AN+D ++V L+ ++++ F K+ Y
Sbjct: 248 PRFVAPAQMFGSGTAYVTQRANKDDGIAVLFGLEPQYLQCFEKVFY 111
Score = 64.3 bits (134), Expect(2) = 4e-033
Identities = 26/55 (47%), Positives = 32/55 (58%)
Frame = -3 / -3
Query: 835 APRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVI 671
AP STY + AH+WRC +ARGL T+L + R R +P LP YFGN I
Sbjct: 662 APGVSTYCAVTAHLWRCMCVARGLAPCSDTRLRVPANVRHRPRPALPRSYFGNAI 498
>gb|CD231664.1|CD231664 SS1_22_H03.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_22_H03_A012 5', mRNA sequence
Length = 709
Score = 84.9 bits (179), Expect(2) = 2e-031
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = -3 / +2
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARD 1013
QHHVA G SGLHFINSW+DLCRG I+ MPFIDR+L+RARD
Sbjct: 587 QHHVADGMSGLHFINSWSDLCRGAQISVMPFIDRTLIRARD 709
Score = 73.5 bits (154), Expect(2) = 2e-031
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -2 / +2
Query: 1262 PPGDLERLIPTVDFTDDISSFPLLVLQVTHFKWGFFFFGEGM 1137
P DL+RLIPTVD+TDDIS+FPLLVLQVTHFK G G GM
Sbjct: 461 PTMDLKRLIPTVDYTDDISAFPLLVLQVTHFKCGGISLGVGM 586
>gb|CX615617.1|CX615617 GABR1_21_E12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_21_E12_A002 3', mRNA sequence
Length = 656
Score = 99.6 bits (211), Expect(2) = 2e-031
Identities = 38/106 (35%), Positives = 64/106 (60%)
Frame = -1 / +1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I+ A+DR+DD Y RS +DYLE++ + + +L + SW+ +P++DADFGWG
Sbjct: 211 IKDAVDRVDDAYVRSVVDYLEVESEKGSQAARGQLMPESDLWVVSWLGMPMYDADFGWGT 390
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIY 286
P F+ P + G A+V AN+D ++V L+ ++++ F K+ Y
Sbjct: 391 PRFVAPAQMFGSGTAYVTQRANKDDGIAVLFGLEPQYLQCFEKVFY 528
Score = 58.3 bits (121), Expect(2) = 2e-031
Identities = 23/46 (50%), Positives = 28/46 (60%)
Frame = -3 / +1
Query: 808 LAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVI 671
+ AH+WRC +ARGL T+L R RL+P LP GYFGN I
Sbjct: 4 VTAHLWRCMCVARGLAPCSDTRLRVPAXVRHRLRPALPRGYFGNAI 141
>gb|CL155605.1|CL155605 104_341_10782265_114_31471_361 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782265, DNA
sequence
Length = 737
Score = 84.0 bits (177), Expect(3) = 6e-031
Identities = 29/68 (42%), Positives = 48/68 (70%)
Frame = -1 / -2
Query: 486 NLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHME 307
+L SW+ + +HD+DFGWG PVFMGP + Y G +V+ + ++G++++A+SL+ E M
Sbjct: 430 HLRAISWMGMSLHDSDFGWGAPVFMGPALMYYSGFVYVMQAPGKEGAVALALSLEPESMP 251
Query: 306 KFRKLIYD 283
+FRK+ D
Sbjct: 250 EFRKVFAD 227
Score = 68.0 bits (142), Expect(3) = 6e-031
Identities = 27/49 (55%), Positives = 31/49 (63%)
Frame = -3 / -2
Query: 802 AHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVIFHGDA 656
A VW+CA AR LPAD T+L+ D R RL PPLP GYFGN + A
Sbjct: 736 ALVWQCACRARSLPADAETRLFSMVDMRARLAPPLPPGYFGNAVIRTSA 590
Score = 22.6 bits (43), Expect(3) = 6e-031
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2 / -3
Query: 575 TGTAGQRWTTW 543
T T G+ WTTW
Sbjct: 510 TTTRGRWWTTW 478
>gb|CD220761.1|CD220761 CCC1_69_C10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_69_C10_A007 3', mRNA sequence
Length = 538
Score = 131 bits (281), Expect = 2e-029
Identities = 54/60 (90%), Positives = 57/60 (95%)
Frame = -1 / +1
Query: 453 IHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF*S 274
IHDADFGWGRPVFMGPGGIAYEGLAFVLPSAN DGSLS+AISLQAEHMEKFRKLI + *+
Sbjct: 1 IHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLICEV*T 180
>gb|CW083258.1|CW083258 104_425_10944176_114_32389_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944176, DNA
sequence
Length = 637
Score = 90.4 bits (191), Expect(4) = 4e-028
Identities = 33/58 (56%), Positives = 41/58 (70%)
Frame = -3 / +3
Query: 841 EGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVIF 668
EG+ + ST+ + AHVWRCA ARGL D+ T+LY D R R++PPLPEGY GN IF
Sbjct: 321 EGSKKVSTFKAVVAHVWRCACTARGLAQDEDTRLYMTADARSRVRPPLPEGYLGNAIF 494
Score = 36.8 bits (74), Expect(4) = 4e-028
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3 / +3
Query: 1057 AGMPFIDRSLLRARDPPTPGYPHIEY 980
A P++DR+LLRAR PP + H EY
Sbjct: 138 APRPWLDRTLLRARSPPDVRFDHSEY 215
Score = 33.6 bits (67), Expect(4) = 4e-028
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 584 GWTTGTAGQRWTTWS 540
GWTT T G+ WT WS
Sbjct: 580 GWTTSTCGRWWTAWS 624
Score = 27.2 bits (53), Expect(4) = 4e-028
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3 / +3
Query: 1141 ACQHHVAGGFSGLHFINSWA 1082
A H A G + L F+N+WA
Sbjct: 48 AIHHTAADGLAALDFVNTWA 107
>gb|CW083257.1|CW083257 104_425_10944176_114_32353_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944176, DNA
sequence
Length = 670
Score = 90.4 bits (191), Expect(4) = 4e-028
Identities = 33/58 (56%), Positives = 41/58 (70%)
Frame = -3 / +3
Query: 841 EGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVIF 668
EG+ + ST+ + AHVWRCA ARGL D+ T+LY D R R++PPLPEGY GN IF
Sbjct: 321 EGSKKVSTFKAVVAHVWRCACTARGLAQDEDTRLYMTADARSRVRPPLPEGYLGNAIF 494
Score = 36.8 bits (74), Expect(4) = 4e-028
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3 / +3
Query: 1057 AGMPFIDRSLLRARDPPTPGYPHIEY 980
A P++DR+LLRAR PP + H EY
Sbjct: 138 APRPWLDRTLLRARSPPDVRFDHSEY 215
Score = 33.6 bits (67), Expect(4) = 4e-028
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 584 GWTTGTAGQRWTTWS 540
GWTT T G+ WT WS
Sbjct: 580 GWTTSTCGRWWTAWS 624
Score = 27.2 bits (53), Expect(4) = 4e-028
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3 / +3
Query: 1141 ACQHHVAGGFSGLHFINSWA 1082
A H A G + L F+N+WA
Sbjct: 48 AIHHTAADGLAALDFVNTWA 107
>gb|CX610480.1|CX610480 ANR1_19_B02.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_19_B02_A002 3', mRNA sequence
Length = 794
Score = 70.7 bits (148), Expect(3) = 4e-025
Identities = 32/68 (47%), Positives = 40/68 (58%)
Frame = -3 / +3
Query: 874 LVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLP 695
L R+R+ A R +T+ L+ VWR + A GL +Q TKL A DGR+R PPLP
Sbjct: 18 LERVRALALADGAXGRCTTFEALSGLVWRARTKALGLAPEQRTKLLFAVDGRRRFSPPLP 197
Query: 694 EGYFGNVI 671
GYFGN I
Sbjct: 198 RGYFGNGI 221
Score = 57.4 bits (119), Expect(3) = 4e-025
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = -1 / +3
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFR 298
+T+W RL H ADFGWG PV GP + + + L S++V + L A M+ F+
Sbjct: 393 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 572
Query: 297 KLI 289
+L+
Sbjct: 573 ELM 581
Score = 26.7 bits (52), Expect(3) = 4e-025
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / +3
Query: 603 IQAALDRMDDGYCRSALDYLE 541
+Q A+ + D Y RSA+DY E
Sbjct: 291 VQEAVRMVTDDYMRSAVDYFE 353
>gb|CX616799.1|CX616799 GABR1_30_B03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_30_B03_A002 3', mRNA sequence
Length = 746
Score = 70.3 bits (147), Expect(3) = 5e-025
Identities = 32/68 (47%), Positives = 40/68 (58%)
Frame = -3 / +1
Query: 874 LVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLP 695
L R+R+ A R +T+ L+ VWR + A GL +Q TKL A DGR+R PPLP
Sbjct: 4 LERVRALALADGALGRCTTFEALSGLVWRARTKALGLAPEQRTKLLFAVDGRRRFSPPLP 183
Query: 694 EGYFGNVI 671
GYFGN I
Sbjct: 184 RGYFGNGI 207
Score = 57.4 bits (119), Expect(3) = 5e-025
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = -1 / +1
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFR 298
+T+W RL H ADFGWG PV GP + + + L S++V + L A M+ F+
Sbjct: 379 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 558
Query: 297 KLI 289
+L+
Sbjct: 559 ELM 567
Score = 26.7 bits (52), Expect(3) = 5e-025
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / +1
Query: 603 IQAALDRMDDGYCRSALDYLE 541
+Q A+ + D Y RSA+DY E
Sbjct: 277 VQEAVRMVTDDYMRSAVDYFE 339
>gb|CX607149.1|CX607149 ANR1_7_A11.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_7_A11_A002 3', mRNA sequence
Length = 708
Score = 70.3 bits (147), Expect(3) = 5e-025
Identities = 32/68 (47%), Positives = 40/68 (58%)
Frame = -3 / +1
Query: 874 LVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLP 695
L R+R+ A R +T+ L+ VWR + A GL +Q TKL A DGR+R PPLP
Sbjct: 13 LERVRALALADGALGRCTTFEALSGLVWRARTKALGLAPEQRTKLLFAVDGRRRFSPPLP 192
Query: 694 EGYFGNVI 671
GYFGN I
Sbjct: 193 RGYFGNGI 216
Score = 57.4 bits (119), Expect(3) = 5e-025
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = -1 / +1
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFR 298
+T+W RL H ADFGWG PV GP + + + L S++V + L A M+ F+
Sbjct: 388 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 567
Query: 297 KLI 289
+L+
Sbjct: 568 ELM 576
Score = 26.7 bits (52), Expect(3) = 5e-025
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / +1
Query: 603 IQAALDRMDDGYCRSALDYLE 541
+Q A+ + D Y RSA+DY E
Sbjct: 286 VQEAVRMVTDDYMRSAVDYFE 348
>gb|CX609879.1|CX609879 ANR1_15_G02.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_15_G02_A002 3', mRNA sequence
Length = 708
Score = 70.3 bits (147), Expect(3) = 5e-025
Identities = 32/68 (47%), Positives = 40/68 (58%)
Frame = -3 / +3
Query: 874 LVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLP 695
L R+R+ A R +T+ L+ VWR + A GL +Q TKL A DGR+R PPLP
Sbjct: 51 LERVRALALADGALGRCTTFEALSGLVWRARTKALGLAPEQRTKLLFAVDGRRRFSPPLP 230
Query: 694 EGYFGNVI 671
GYFGN I
Sbjct: 231 RGYFGNGI 254
Score = 57.4 bits (119), Expect(3) = 5e-025
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = -1 / +3
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFR 298
+T+W RL H ADFGWG PV GP + + + L S++V + L A M+ F+
Sbjct: 426 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 605
Query: 297 KLI 289
+L+
Sbjct: 606 ELM 614
Score = 26.7 bits (52), Expect(3) = 5e-025
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / +3
Query: 603 IQAALDRMDDGYCRSALDYLE 541
+Q A+ + D Y RSA+DY E
Sbjct: 324 VQEAVRMVTDDYMRSAVDYFE 386
>gb|CW502316.1|CW502316 fsbb001f298j11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f298j11, DNA
sequence
Length = 520
Score = 68.9 bits (144), Expect(2) = 6e-025
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = -1 / +1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I+ A+DR+DD Y RS +DYLE++ + + +L + SW+ +P++DADFGWG
Sbjct: 331 IKDAVDRVDDAYVRSVVDYLEVESEKGSQAARGQLMPESDLWVVSWLGMPMYDADFGWGT 510
Query: 423 PVF 415
P F
Sbjct: 511 PRF 519
Score = 67.5 bits (141), Expect(2) = 6e-025
Identities = 27/55 (49%), Positives = 33/55 (60%)
Frame = -3 / +1
Query: 835 APRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVI 671
AP STY + AH+WRC +ARGL T+L + R RL+P LP YFGN I
Sbjct: 97 APGVSTYCAVTAHLWRCMCVARGLAPCSDTRLRVPANVRHRLRPALPRSYFGNAI 261
>gb|CN127986.1|CN127986 RHOH1_26_G01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_26_G01_A002 3', mRNA sequence
Length = 778
Score = 68.9 bits (144), Expect(3) = 1e-024
Identities = 33/75 (44%), Positives = 42/75 (56%)
Frame = -3 / +3
Query: 895 FKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQ 716
F S AE R +++ R +T+ L+ VWR + A GL +Q TKL A DGR+
Sbjct: 12 FVNSWAETARGVAELTVPPFLDRCTTFEALSGLVWRARTKALGLAPEQRTKLLFAVDGRR 191
Query: 715 RLQPPLPEGYFGNVI 671
R PPLP GYFGN I
Sbjct: 192 RFSPPLPRGYFGNGI 236
Score = 57.4 bits (119), Expect(3) = 1e-024
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = -1 / +3
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFR 298
+T+W RL H ADFGWG PV GP + + + L S++V + L A M+ F+
Sbjct: 408 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 587
Query: 297 KLI 289
+L+
Sbjct: 588 ELM 596
Score = 26.7 bits (52), Expect(3) = 1e-024
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / +3
Query: 603 IQAALDRMDDGYCRSALDYLE 541
+Q A+ + D Y RSA+DY E
Sbjct: 306 VQEAVRMVTDDYMRSAVDYFE 368
>gb|CX610855.1|CX610855 ANR1_21_E10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_21_E10_A002 3', mRNA sequence
Length = 766
Score = 67.5 bits (141), Expect(3) = 2e-024
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = -3 / +2
Query: 829 RFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVI 671
R +T+ L+ VWR + A GL +Q TKL A DGR+R PPLP GYFGN I
Sbjct: 35 RCTTFEALSGLVWRARTKALGLAPEQRTKLLFAVDGRRRFSPPLPRGYFGNGI 193
Score = 58.3 bits (121), Expect(3) = 2e-024
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = -1 / +2
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFR 298
+T+W RL H ADFGWG PV GP + + + L S++V + L A M+ F+
Sbjct: 365 ITTWSRLEFHGADFGWGEPVMSGPVALPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 544
Query: 297 KLI 289
+L+
Sbjct: 545 ELM 553
Score = 26.7 bits (52), Expect(3) = 2e-024
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / +2
Query: 603 IQAALDRMDDGYCRSALDYLE 541
+Q A+ + D Y RSA+DY E
Sbjct: 263 VQEAVRMVTDDYMRSAVDYFE 325
>gb|CW083259.1|CW083259 104_425_10944176_116_32357_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944176, DNA
sequence
Length = 734
Score = 85.4 bits (180), Expect(3) = 2e-024
Identities = 31/83 (37%), Positives = 52/83 (62%)
Frame = -1 / -1
Query: 531 DLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRD 352
D + L +G +L + SW LPI+DADFGWGRP FMG + + GL +++P + D
Sbjct: 530 DAAGLRKGEWVMPETDLWVISWQGLPIYDADFGWGRPAFMGRACLQFSGLVYLVPGPDGD 351
Query: 351 GSLSVAISLQAEHMEKFRKLIYD 283
G L V ++++ + + +F++L Y+
Sbjct: 350 GRLDVVVAMEPKSLARFKELFYE 282
Score = 33.6 bits (67), Expect(3) = 2e-024
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 584 GWTTGTAGQRWTTWS 540
GWTT T G+ WT WS
Sbjct: 586 GWTTSTCGRWWTAWS 542
Score = 33.1 bits (66), Expect(3) = 2e-024
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3 / -1
Query: 709 QPPLPEGYFGNVIF 668
+PPLPEGY GN IF
Sbjct: 713 RPPLPEGYLGNAIF 672
>gb|CW194898.1|CW194898 104_618_11180347_148_37428_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180347, DNA
sequence
Length = 640
Score = 99.6 bits (211), Expect(2) = 4e-024
Identities = 38/106 (35%), Positives = 64/106 (60%)
Frame = -1 / -2
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I+ A+DR+DD Y RS +DYLE++ + + +L + SW+ +P++DADFGWG
Sbjct: 456 IKDAVDRVDDAYVRSVVDYLEVESEKGSQAARGQLMPESDLWVVSWLGMPMYDADFGWGT 277
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIY 286
P F+ P + G A+V AN+D ++V L+ ++++ F K+ Y
Sbjct: 276 PRFVAPAQMFGSGTAYVTQRANKDDGIAVLFGLEPQYLQCFEKVFY 139
Score = 34.1 bits (68), Expect(2) = 4e-024
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -3 / -2
Query: 778 LARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVI 671
+ARGL T+L + R P LP YFGN I
Sbjct: 633 VARGLAQCSDTRLRVPANVSHRCHPALPRSYFGNAI 526
>gb|CW034021.1|CW034021 104_263_10502300_114_30359 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502300, DNA
sequence
Length = 641
Score = 66.1 bits (138), Expect(3) = 8e-024
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = -3 / -2
Query: 823 STYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVI 671
+T+ L+ VWR + A GL +Q TKL A DGR+R PPLP GYFGN I
Sbjct: 637 TTFEALSGLVWRARTKALGLAPEQRTKLLFAVDGRRRFSPPLPRGYFGNGI 485
Score = 57.4 bits (119), Expect(3) = 8e-024
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = -1 / -2
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFR 298
+T+W RL H ADFGWG PV GP + + + L S++V + L A M+ F+
Sbjct: 313 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 134
Query: 297 KLI 289
+L+
Sbjct: 133 ELM 125
Score = 26.7 bits (52), Expect(3) = 8e-024
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / -2
Query: 603 IQAALDRMDDGYCRSALDYLE 541
+Q A+ + D Y RSA+DY E
Sbjct: 415 VQEAVRMVTDDYMRSAVDYFE 353
>gb|CD222383.1|CD222383 CCC1_21_B05.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_21_B05_A007 5', mRNA sequence
Length = 660
Score = 73.5 bits (154), Expect(2) = 4e-023
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -2 / +3
Query: 1262 PPGDLERLIPTVDFTDDISSFPLLVLQVTHFKWGFFFFGEGM 1137
P DL+RLIPTVD+TDDIS+FPLLVLQVTHFK G G GM
Sbjct: 462 PTMDLKRLIPTVDYTDDISAFPLLVLQVTHFKCGGISLGVGM 587
Score = 57.0 bits (118), Expect(2) = 4e-023
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -3 / +3
Query: 1135 QHHVAGGFSGLHFINSWADLCRG 1067
QHHVA G SGLHFINSW+DLCRG
Sbjct: 588 QHHVADGMSGLHFINSWSDLCRG 656
>gb|CX606141.1|CX606141 ANR1_1_H04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_H04_A002 3', mRNA sequence
Length = 716
Score = 62.5 bits (130), Expect(3) = 9e-023
Identities = 26/46 (56%), Positives = 30/46 (65%)
Frame = -3 / +3
Query: 808 LAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVI 671
L+ VWR + A GL +Q TKL A DGR+R PPLP GYFGN I
Sbjct: 6 LSGLVWRARTKALGLAPEQRTKLLFAVDGRRRFSPPLPRGYFGNGI 143
Score = 57.4 bits (119), Expect(3) = 9e-023
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = -1 / +3
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFR 298
+T+W RL H ADFGWG PV GP + + + L S++V + L A M+ F+
Sbjct: 315 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 494
Query: 297 KLI 289
+L+
Sbjct: 495 ELM 503
Score = 26.7 bits (52), Expect(3) = 9e-023
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / +3
Query: 603 IQAALDRMDDGYCRSALDYLE 541
+Q A+ + D Y RSA+DY E
Sbjct: 213 VQEAVRMVTDDYMRSAVDYFE 275
>gb|CX607227.1|CX607227 ANR1_7_H10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_7_H10_A002 3', mRNA sequence
Length = 634
Score = 61.6 bits (128), Expect(3) = 2e-022
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = -3 / +1
Query: 796 VWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVI 671
VWR + A GL +Q TKL A DGR+R PPLP GYFGN I
Sbjct: 7 VWRARTKALGLAPEQRTKLLFAVDGRRRFSPPLPRGYFGNGI 132
Score = 57.4 bits (119), Expect(3) = 2e-022
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = -1 / +1
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFR 298
+T+W RL H ADFGWG PV GP + + + L S++V + L A M+ F+
Sbjct: 304 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 483
Query: 297 KLI 289
+L+
Sbjct: 484 ELM 492
Score = 26.7 bits (52), Expect(3) = 2e-022
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / +1
Query: 603 IQAALDRMDDGYCRSALDYLE 541
+Q A+ + D Y RSA+DY E
Sbjct: 202 VQEAVRMVTDDYMRSAVDYFE 264
>gb|CN151897.1|CN151897 WOUND1_78_H11.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_78_H11_A002 3', mRNA sequence
Length = 654
Score = 61.1 bits (127), Expect(3) = 2e-022
Identities = 25/46 (54%), Positives = 30/46 (65%)
Frame = -3 / +2
Query: 808 LAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVI 671
L+ +WR + A GL +Q TKL A DGR+R PPLP GYFGN I
Sbjct: 5 LSGLLWRARTKALGLAPEQRTKLLFAVDGRRRFSPPLPRGYFGNGI 142
Score = 57.4 bits (119), Expect(3) = 2e-022
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = -1 / +2
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFR 298
+T+W RL H ADFGWG PV GP + + + L S++V + L A M+ F+
Sbjct: 314 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 493
Query: 297 KLI 289
+L+
Sbjct: 494 ELM 502
Score = 26.7 bits (52), Expect(3) = 2e-022
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / +2
Query: 603 IQAALDRMDDGYCRSALDYLE 541
+Q A+ + D Y RSA+DY E
Sbjct: 212 VQEAVRMVTDDYMRSAVDYFE 274
>gb|CW099235.1|CW099235 104_466_11003441_116_34380_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11003441, DNA
sequence
Length = 629
Score = 78.0 bits (164), Expect(3) = 3e-022
Identities = 28/65 (43%), Positives = 45/65 (69%)
Frame = -1 / -1
Query: 486 NLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHME 307
+L SWV + ++ ADFGWG P FMGP + Y G +V+ +A ++G+L++ +SL+ E M
Sbjct: 377 HLRAISWVGMSLYKADFGWGAPAFMGPALMYYSGFVYVMNAAGKEGALALVLSLEPETMP 198
Query: 306 KFRKL 292
+FRK+
Sbjct: 197 EFRKV 183
Score = 44.1 bits (90), Expect(3) = 3e-022
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = -3 / -1
Query: 748 TKLYCATDGRQRLQPPLPEGYFGNVI 671
T+LY D R RL PPLP GYFGN +
Sbjct: 629 TRLYSMIDMRSRLDPPLPPGYFGNAV 552
Score = 22.6 bits (43), Expect(3) = 3e-022
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2 / -2
Query: 575 TGTAGQRWTTW 543
T T G+ WTTW
Sbjct: 457 TTTRGRWWTTW 425
>gb|CX615267.1|CX615267 GABR1_19_D03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_19_D03_A002 3', mRNA sequence
Length = 690
Score = 59.7 bits (124), Expect(3) = 6e-022
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = -3 / +3
Query: 793 WRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVI 671
WR + A GL +Q TKL A DGR+R PPLP GYFGN I
Sbjct: 3 WRARTKALGLAPEQRTKLLFAVDGRRRFSPPLPRGYFGNGI 125
Score = 57.4 bits (119), Expect(3) = 6e-022
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = -1 / +3
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFR 298
+T+W RL H ADFGWG PV GP + + + L S++V + L A M+ F+
Sbjct: 297 ITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGKERKSINVLLGLPATAMDAFQ 476
Query: 297 KLI 289
+L+
Sbjct: 477 ELM 485
Score = 26.7 bits (52), Expect(3) = 6e-022
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / +3
Query: 603 IQAALDRMDDGYCRSALDYLE 541
+Q A+ + D Y RSA+DY E
Sbjct: 195 VQEAVRMVTDDYMRSAVDYFE 257
>gb|CX610276.1|CX610276 ANR1_17_E01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_17_E01_A002 5', mRNA sequence
Length = 640
Score = 69.3 bits (145), Expect(2) = 4e-021
Identities = 29/42 (69%), Positives = 32/42 (76%)
Frame = -2 / +3
Query: 1262 PPGDLERLIPTVDFTDDISSFPLLVLQVTHFKWGFFFFGEGM 1137
P DL+RL PTVD+ DDIS+FPLLVLQVTHFK G G GM
Sbjct: 447 PTMDLKRLFPTVDYADDISAFPLLVLQVTHFKCGGISLGVGM 572
Score = 54.2 bits (112), Expect(2) = 4e-021
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = -3 / +3
Query: 1135 QHHVAGGFSGLHFINSWADLCR 1070
QHHVA G SGLHFINSW+DLCR
Sbjct: 573 QHHVADGMSGLHFINSWSDLCR 638
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,487,988,617
Number of Sequences: 832831
Number of extensions: 22972594
Number of successful extensions: 341008
Number of sequences better than 1.0e-020: 57
length of database: 163,786,556
effective HSP length: 56
effective length of database: 117,148,020
effective search space used: 47796392160
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)